BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035895
(527 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 152/338 (44%), Gaps = 61/338 (18%)
Query: 20 CYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSSI----VDELSLSDNYL 74
C + +D S NKL G S I + LK+ ++ +N +G + + + LSL++N
Sbjct: 219 CSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKF 278
Query: 75 TSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVG-------------NFS------ 115
T P+ FLS C L LD+S N G +P G NFS
Sbjct: 279 TGEIPD--FLSGA--CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 334
Query: 116 -----QSLEFIWMSDCNISGGISEEIGNLT-DLISIDLGGNKLNGSISITLGKLQK--LQ 167
+ L+ + +S SG + E + NL+ L+++DL N +G I L + K LQ
Sbjct: 335 TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 394
Query: 168 FLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHL-------- 219
L + N G IP L + + L L L N LSG+IP+ G+L+ LR+L L
Sbjct: 395 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE 454
Query: 220 ----------------DSNELT-SIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLT 262
D N+LT IPS L N ++ ++ +N G +P IG L+ L
Sbjct: 455 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 514
Query: 263 RIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300
+ S N+ G+IP + +SL +L L N G+IP
Sbjct: 515 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 137/308 (44%), Gaps = 45/308 (14%)
Query: 28 SQNKLVGIVSIT-IFNLSTLKVFDVDNNYVLGRL----SSIVDELSLSDNYLTSSTPELS 82
S NK+ G V ++ NL L V NN+ G S + L +S N L+
Sbjct: 183 SGNKISGDVDVSRCVNLEFLDV--SSNNFSTGIPFLGDCSALQHLDISGNKLSGD----- 235
Query: 83 FLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTD- 141
F ++S C LK L+IS N G +P + +SL+++ +++ +G I + + D
Sbjct: 236 FSRAISTCTELKLLNISSNQFVGPIPPLP---LKSLQYLSLAENKFTGEIPDFLSGACDT 292
Query: 142 LISIDLGGNKLNGSISI-------------------------TLGKLQKLQFLSFRGNEL 176
L +DL GN G++ TL K++ L+ L NE
Sbjct: 293 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 352
Query: 177 EGSIPNVLCHL-AVLFQLDLRGNKLSGSI-PT-CFGNLTALRNLHLDSNELTS-IPSILW 232
G +P L +L A L LDL N SG I P C L+ L+L +N T IP L
Sbjct: 353 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 412
Query: 233 NLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGH 292
N +++ L N G +PS +G+L L + N L G+IP + +K+L+ L L
Sbjct: 413 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 472
Query: 293 NRLQGSIP 300
N L G IP
Sbjct: 473 NDLTGEIP 480
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 141/324 (43%), Gaps = 44/324 (13%)
Query: 14 GMTGDV------CYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS----- 61
G TG + C + ++ S N L G + ++ +LS L+ + N + G +
Sbjct: 402 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 461
Query: 62 -SIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEF 120
++ L L N LT P S +SNC L + +S N L G +P+ +G ++L
Sbjct: 462 VKTLETLILDFNDLTGEIP-----SGLSNCTNLNWISLSNNRLTGEIPKWIGRL-ENLAI 515
Query: 121 IWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITL----GKLQKLQFLSFR---- 172
+ +S+ + SG I E+G+ LI +DL N NG+I + GK+ F++ +
Sbjct: 516 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAA-NFIAGKRYVY 574
Query: 173 -------------GN--ELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNL 217
GN E +G L L+ ++ G F N ++ L
Sbjct: 575 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 634
Query: 218 HLDSNELTS-IPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP 276
+ N L+ IP + ++ + L+ N G +P ++G+L+ L +D S N L G IP
Sbjct: 635 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 694
Query: 277 TTIQGLKSLQFLSLGHNRLQGSIP 300
+ L L + L +N L G IP
Sbjct: 695 QAMSALTMLTEIDLSNNNLSGPIP 718
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 45 TLKVFDVDNNYVLGRLSSIVD------ELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDI 98
TL+ + NN G++ + L LS NYL+ + P SS+ + L+ L +
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP-----SSLGSLSKLRDLKL 446
Query: 99 SRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISI 158
N L+G +P+ + + ++LE + + +++G I + N T+L I L N+L G I
Sbjct: 447 WLNMLEGEIPQEL-MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 505
Query: 159 TLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCF----GNLTA- 213
+G+L+ L L N G+IP L L LDL N +G+IP G + A
Sbjct: 506 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 565
Query: 214 ---------------LRNLHLDSN--ELTSIPSILWN-LKDILYLDFWSNLFVGPLPSKI 255
+ H N E I S N L + S ++ G
Sbjct: 566 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 625
Query: 256 GNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPN 301
N + +D S N L G IP I + L L+LGHN + GSIP+
Sbjct: 626 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 671
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 96 LDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGS 155
LD+S N L G++P+ +G+ L + + +ISG I +E+G+L L +DL NKL+G
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPY-LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 692
Query: 156 ISITLGKLQKLQFLSFRGNELEGSIPNV 183
I + L L + N L G IP +
Sbjct: 693 IPQAMSALTMLTEIDLSNNNLSGPIPEM 720
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 78/207 (37%), Gaps = 55/207 (26%)
Query: 147 LGGNKLNGSIS-------------------------ITLGKLQKLQFLSFRGNELE--GS 179
L + +NGS+S +LG L+FL+ N L+ G
Sbjct: 81 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGK 140
Query: 180 IPNVLCHLAVLFQLDLRGNKLSGSIPTCF--------------------GNLTALRNLHL 219
+ L L L LDL N +SG+ + G++ R ++L
Sbjct: 141 VSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNL 199
Query: 220 D-----SNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGD 274
+ SN ++ L + + +LD N G I L ++ S N +G
Sbjct: 200 EFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 259
Query: 275 IPTTIQGLKSLQFLSLGHNRLQGSIPN 301
IP LKSLQ+LSL N+ G IP+
Sbjct: 260 IPPLP--LKSLQYLSLAENKFTGEIPD 284
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 29 QNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS------SIVDELSLSDNYLTSSTPELS 82
N + G + + +L L + D+ +N + GR+ +++ E+ LS+N L+ PE+
Sbjct: 662 HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMG 721
Query: 83 FLSSMSNCKYLKKLDISRNPL 103
+ K+L + PL
Sbjct: 722 QFETFPPAKFLNNPGLCGYPL 742
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/338 (29%), Positives = 152/338 (44%), Gaps = 61/338 (18%)
Query: 20 CYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSSI----VDELSLSDNYL 74
C + +D S NKL G S I + LK+ ++ +N +G + + + LSL++N
Sbjct: 222 CSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKF 281
Query: 75 TSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVG-------------NFS------ 115
T P+ FLS C L LD+S N G +P G NFS
Sbjct: 282 TGEIPD--FLSGA--CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD 337
Query: 116 -----QSLEFIWMSDCNISGGISEEIGNLT-DLISIDLGGNKLNGSISITLGKLQK--LQ 167
+ L+ + +S SG + E + NL+ L+++DL N +G I L + K LQ
Sbjct: 338 TLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397
Query: 168 FLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHL-------- 219
L + N G IP L + + L L L N LSG+IP+ G+L+ LR+L L
Sbjct: 398 ELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGE 457
Query: 220 ----------------DSNELT-SIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLT 262
D N+LT IPS L N ++ ++ +N G +P IG L+ L
Sbjct: 458 IPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLA 517
Query: 263 RIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300
+ S N+ G+IP + +SL +L L N G+IP
Sbjct: 518 ILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/308 (29%), Positives = 137/308 (44%), Gaps = 45/308 (14%)
Query: 28 SQNKLVGIVSIT-IFNLSTLKVFDVDNNYVLGRL----SSIVDELSLSDNYLTSSTPELS 82
S NK+ G V ++ NL L V NN+ G S + L +S N L+
Sbjct: 186 SGNKISGDVDVSRCVNLEFLDV--SSNNFSTGIPFLGDCSALQHLDISGNKLSGD----- 238
Query: 83 FLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTD- 141
F ++S C LK L+IS N G +P + +SL+++ +++ +G I + + D
Sbjct: 239 FSRAISTCTELKLLNISSNQFVGPIPPLP---LKSLQYLSLAENKFTGEIPDFLSGACDT 295
Query: 142 LISIDLGGNKLNGSISI-------------------------TLGKLQKLQFLSFRGNEL 176
L +DL GN G++ TL K++ L+ L NE
Sbjct: 296 LTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEF 355
Query: 177 EGSIPNVLCHL-AVLFQLDLRGNKLSGSI-PT-CFGNLTALRNLHLDSNELTS-IPSILW 232
G +P L +L A L LDL N SG I P C L+ L+L +N T IP L
Sbjct: 356 SGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLS 415
Query: 233 NLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGH 292
N +++ L N G +PS +G+L L + N L G+IP + +K+L+ L L
Sbjct: 416 NCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDF 475
Query: 293 NRLQGSIP 300
N L G IP
Sbjct: 476 NDLTGEIP 483
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 141/324 (43%), Gaps = 44/324 (13%)
Query: 14 GMTGDV------CYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS----- 61
G TG + C + ++ S N L G + ++ +LS L+ + N + G +
Sbjct: 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 464
Query: 62 -SIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEF 120
++ L L N LT P S +SNC L + +S N L G +P+ +G ++L
Sbjct: 465 VKTLETLILDFNDLTGEIP-----SGLSNCTNLNWISLSNNRLTGEIPKWIGRL-ENLAI 518
Query: 121 IWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITL----GKLQKLQFLSFR---- 172
+ +S+ + SG I E+G+ LI +DL N NG+I + GK+ F++ +
Sbjct: 519 LKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAA-NFIAGKRYVY 577
Query: 173 -------------GN--ELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNL 217
GN E +G L L+ ++ G F N ++ L
Sbjct: 578 IKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637
Query: 218 HLDSNELTS-IPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP 276
+ N L+ IP + ++ + L+ N G +P ++G+L+ L +D S N L G IP
Sbjct: 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIP 697
Query: 277 TTIQGLKSLQFLSLGHNRLQGSIP 300
+ L L + L +N L G IP
Sbjct: 698 QAMSALTMLTEIDLSNNNLSGPIP 721
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 123/286 (43%), Gaps = 35/286 (12%)
Query: 45 TLKVFDVDNNYVLGRLSSIVD------ELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDI 98
TL+ + NN G++ + L LS NYL+ + P SS+ + L+ L +
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIP-----SSLGSLSKLRDLKL 449
Query: 99 SRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISI 158
N L+G +P+ + + ++LE + + +++G I + N T+L I L N+L G I
Sbjct: 450 WLNMLEGEIPQEL-MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPK 508
Query: 159 TLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCF----GNLTA- 213
+G+L+ L L N G+IP L L LDL N +G+IP G + A
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAAN 568
Query: 214 ---------------LRNLHLDSN--ELTSIPSILWN-LKDILYLDFWSNLFVGPLPSKI 255
+ H N E I S N L + S ++ G
Sbjct: 569 FIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628
Query: 256 GNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPN 301
N + +D S N L G IP I + L L+LGHN + GSIP+
Sbjct: 629 DNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 96 LDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGS 155
LD+S N L G++P+ +G+ L + + +ISG I +E+G+L L +DL NKL+G
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPY-LFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 695
Query: 156 ISITLGKLQKLQFLSFRGNELEGSIPNV 183
I + L L + N L G IP +
Sbjct: 696 IPQAMSALTMLTEIDLSNNNLSGPIPEM 723
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 78/207 (37%), Gaps = 55/207 (26%)
Query: 147 LGGNKLNGSIS-------------------------ITLGKLQKLQFLSFRGNELE--GS 179
L + +NGS+S +LG L+FL+ N L+ G
Sbjct: 84 LSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGK 143
Query: 180 IPNVLCHLAVLFQLDLRGNKLSGSIPTCF--------------------GNLTALRNLHL 219
+ L L L LDL N +SG+ + G++ R ++L
Sbjct: 144 VSGGL-KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNL 202
Query: 220 D-----SNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGD 274
+ SN ++ L + + +LD N G I L ++ S N +G
Sbjct: 203 EFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGP 262
Query: 275 IPTTIQGLKSLQFLSLGHNRLQGSIPN 301
IP LKSLQ+LSL N+ G IP+
Sbjct: 263 IPPLP--LKSLQYLSLAENKFTGEIPD 287
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/81 (23%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 29 QNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS------SIVDELSLSDNYLTSSTPELS 82
N + G + + +L L + D+ +N + GR+ +++ E+ LS+N L+ PE+
Sbjct: 665 HNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMG 724
Query: 83 FLSSMSNCKYLKKLDISRNPL 103
+ K+L + PL
Sbjct: 725 QFETFPPAKFLNNPGLCGYPL 745
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 81/188 (43%), Gaps = 34/188 (18%)
Query: 373 RRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS------------ 420
+RFS +EL A+D FS N++GRG FG VYK RL DG A+K
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 421 ------------------CSNEDFRALVLEYTTNGSLEKVLYS---SNYILDILQRLNIM 459
C R LV Y NGS+ L S LD +R I
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 460 IDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTL 519
+ L YLH IIH D+K N LLD+ A + DFG+AKL+ +D +
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VR 204
Query: 520 AIIGYMAP 527
IG++AP
Sbjct: 205 GTIGHIAP 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 80/188 (42%), Gaps = 34/188 (18%)
Query: 373 RRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS------------ 420
+RFS +EL A+D F N++GRG FG VYK RL DG A+K
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 421 ------------------CSNEDFRALVLEYTTNGSLEKVLYS---SNYILDILQRLNIM 459
C R LV Y NGS+ L S LD +R I
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 460 IDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTL 519
+ L YLH IIH D+K N LLD+ A + DFG+AKL+ +D +
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXA-VR 196
Query: 520 AIIGYMAP 527
IG++AP
Sbjct: 197 GXIGHIAP 204
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 374 RFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIK------------------ 415
R +L AT+ F LIG G FG VYK L+DG + A+K
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 416 VFHFS-----------CSNEDFRALVLEYTTNGSLEKVLYSSN---YILDILQRLNIMID 461
F C + L+ +Y NG+L++ LY S+ + QRL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
L YLH + IIH D+K N LLD+N V ++DFGI+K T DQ+
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 522 IGYMAP 527
+GY+ P
Sbjct: 205 LGYIDP 210
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 28/218 (12%)
Query: 85 SSMSNCKYLKKLDISR-NPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLI 143
SS++N YL L I N L G +P + +Q L +++++ N+SG I + + + L+
Sbjct: 70 SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQ-LHYLYITHTNVSGAIPDFLSQIKTLV 128
Query: 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLF-QLDLRGNKLSG 202
++D N L+G++ ++ L L ++F GN + G+IP+ + LF + + N+L+G
Sbjct: 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG 188
Query: 203 SIPTCFGNLTALRNLHLDSNELTSIPSILWNL------------------------KDIL 238
IP F NL L + L N L S+L+ K++
Sbjct: 189 KIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLN 247
Query: 239 YLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP 276
LD +N G LP + LK L ++ S NNL G+IP
Sbjct: 248 GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 193 LDLRGNKLSGS--IPTCFGNLTALRNLHLD--SNELTSIPSILWNLKDILYLDFWSNLFV 248
LDL G L IP+ NL L L++ +N + IP + L + YL
Sbjct: 55 LDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVS 114
Query: 249 GPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPN 301
G +P + +K L +DFS N L G +P +I L +L ++ NR+ G+IP+
Sbjct: 115 GAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 81/186 (43%), Gaps = 35/186 (18%)
Query: 374 RFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIK------------------ 415
R +L AT+ F LIG G FG VYK L+DG + A+K
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 416 VFHFS-----------CSNEDFRALVLEYTTNGSLEKVLYSSN---YILDILQRLNIMID 461
F C + L+ +Y NG+L++ LY S+ + QRL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
L YLH + IIH D+K N LLD+N V ++DFGI+K T Q+
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 522 IGYMAP 527
+GY+ P
Sbjct: 205 LGYIDP 210
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 130/264 (49%), Gaps = 29/264 (10%)
Query: 42 NLSTLKVFDVDNNYV-----LGRLSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKL 96
NL+ L ++ +N + L L+S+ +LS S N +T P ++N L++L
Sbjct: 127 NLTNLNRLELSSNTISDISALSGLTSL-QQLSFSSNQVTDLKP-------LANLTTLERL 178
Query: 97 DISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSI 156
DIS N + V+ + +LE + ++ IS +G LT+L + L GN+L I
Sbjct: 179 DISSNKVSDI--SVLAKLT-NLESLIATNNQISD--ITPLGILTNLDELSLNGNQL-KDI 232
Query: 157 SITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRN 216
TL L L L N++ P L L L +L L N++S P LTAL N
Sbjct: 233 G-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTN 287
Query: 217 LHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP 276
L L+ N+L I S + NLK++ YL + N P + +L L R+ FS NN + D+
Sbjct: 288 LELNENQLEDI-SPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFS-NNKVSDV- 342
Query: 277 TTIQGLKSLQFLSLGHNRLQGSIP 300
+++ L ++ +LS GHN++ P
Sbjct: 343 SSLANLTNINWLSAGHNQISDLTP 366
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 69/146 (47%), Gaps = 35/146 (23%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKV-----FHFSCSNEDFR-------------------- 427
IG GSFG+V++A G + A+K+ FH NE R
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 428 ------ALVLEYTTNGSLEKVLYSS--NYILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
++V EY + GSL ++L+ S LD +RL++ DV + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKL 505
DLK N L+D + DFG+++L
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 16/221 (7%)
Query: 80 ELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNL 139
+++ L ++N L++LDIS N + V+ + +LE + ++ IS +G L
Sbjct: 161 QVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLT-NLESLIATNNQISD--ITPLGIL 215
Query: 140 TDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNK 199
T+L + L GN+L I TL L L L N++ P L L L +L L N+
Sbjct: 216 TNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 271
Query: 200 LSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLK 259
+S P LTAL NL L+ N+L I S + NLK++ YL + N P + +L
Sbjct: 272 ISNISP--LAGLTALTNLELNENQLEDI-SPISNLKNLTYLTLYFNNISDISP--VSSLT 326
Query: 260 VLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300
L R+ FS NN + D+ +++ L ++ +LS GHN++ P
Sbjct: 327 KLQRLFFS-NNKVSDV-SSLANLTNINWLSAGHNQISDLTP 365
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 29/264 (10%)
Query: 42 NLSTLKVFDVDNNYV-----LGRLSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKL 96
NL+ L ++ +N + L L+S+ +LS S N +T P ++N L++L
Sbjct: 127 NLTNLNRLELSSNTISDISALSGLTSL-QQLSFSSNQVTDLKP-------LANLTTLERL 178
Query: 97 DISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSI 156
DIS N + V+ + +LE + ++ IS +G LT+L + L GN+L I
Sbjct: 179 DISSNKVSDI--SVLAKLT-NLESLIATNNQISD--ITPLGILTNLDELSLNGNQL-KDI 232
Query: 157 SITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRN 216
TL L L L N++ P L L L +L L N++S P LTAL N
Sbjct: 233 G-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTN 287
Query: 217 LHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP 276
L L+ N+L I S + NLK++ YL + N P + +L L R+ F NN + D+
Sbjct: 288 LELNENQLEDI-SPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRL-FFYNNKVSDV- 342
Query: 277 TTIQGLKSLQFLSLGHNRLQGSIP 300
+++ L ++ +LS GHN++ P
Sbjct: 343 SSLANLTNINWLSAGHNQISDLTP 366
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 142/293 (48%), Gaps = 37/293 (12%)
Query: 22 RICTIDSQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSSIVDELSLSDNYLT------ 75
+I I L + +T+FN ++ D+D L L+++ + L LS N ++
Sbjct: 100 QIADITPLANLTNLTGLTLFNN---QITDID---PLKNLTNL-NRLELSSNTISDISALS 152
Query: 76 --SSTPELSF------LSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCN 127
+S +LSF L ++N L++LDIS N + V+ + +LE + ++
Sbjct: 153 GLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLT-NLESLIATNNQ 209
Query: 128 ISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHL 187
IS +G LT+L + L GN+L I TL L L L N++ P L L
Sbjct: 210 ISD--ITPLGILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGL 263
Query: 188 AVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLF 247
L +L L N++S P LTAL NL L+ N+L I S + NLK++ YL + N
Sbjct: 264 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDI-SPISNLKNLTYLTLYFNNI 320
Query: 248 VGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300
P + +L L R+ F+ NN + D+ +++ L ++ +LS GHN++ P
Sbjct: 321 SDISP--VSSLTKLQRLFFA-NNKVSDV-SSLANLTNINWLSAGHNQISDLTP 369
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 141/293 (48%), Gaps = 37/293 (12%)
Query: 22 RICTIDSQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSSIVDELSLSDNYLT------ 75
+I I L + +T+FN ++ D+D L L+++ + L LS N ++
Sbjct: 101 QIADITPLANLTNLTGLTLFNN---QITDID---PLKNLTNL-NRLELSSNTISDISALS 153
Query: 76 --SSTPELSF------LSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCN 127
+S +LSF L ++N L++LDIS N + V+ + +LE + ++
Sbjct: 154 GLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLT-NLESLIATNNQ 210
Query: 128 ISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHL 187
IS +G LT+L + L GN+L I TL L L L N++ P L L
Sbjct: 211 ISD--ITPLGILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGL 264
Query: 188 AVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLF 247
L +L L N++S P LTAL NL L+ N+L I S + NLK++ YL + N
Sbjct: 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDI-SPISNLKNLTYLTLYFNNI 321
Query: 248 VGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300
P + +L L R+ F NN + D+ +++ L ++ +LS GHN++ P
Sbjct: 322 SDISP--VSSLTKLQRL-FFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTP 370
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 113/224 (50%), Gaps = 16/224 (7%)
Query: 77 STPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEI 136
S+ +++ L ++N L++LDIS N + V+ + +LE + ++ IS +
Sbjct: 159 SSNQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLT-NLESLIATNNQISD--ITPL 213
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G LT+L + L GN+L I TL L L L N++ P L L L +L L
Sbjct: 214 GILTNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 269
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIG 256
N++S P LTAL NL L+ N+L I S + NLK++ YL + N P +
Sbjct: 270 ANQISNISP--LAGLTALTNLELNENQLEDI-SPISNLKNLTYLTLYFNNISDISP--VS 324
Query: 257 NLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300
+L L R+ F NN + D+ +++ L ++ +LS GHN++ P
Sbjct: 325 SLTKLQRL-FFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTP 366
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 35/146 (23%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKV-----FHFSCSNEDFR-------------------- 427
IG GSFG+V++A G + A+K+ FH NE R
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 428 ------ALVLEYTTNGSLEKVLYSS--NYILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
++V EY + GSL ++L+ S LD +RL++ DV + YLH + PI+H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKL 505
+LK N L+D + DFG+++L
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL 188
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 111/221 (50%), Gaps = 16/221 (7%)
Query: 80 ELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNL 139
+++ L ++N L++LDIS N + V+ + +LE + ++ IS +G L
Sbjct: 161 QVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLT-NLESLIATNNQISD--ITPLGIL 215
Query: 140 TDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNK 199
T+L + L GN+L I TL L L L N++ P L L L +L L N+
Sbjct: 216 TNLDELSLNGNQL-KDIG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 271
Query: 200 LSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLK 259
+S P LTAL NL L+ N+L I S + NLK++ YL + N P + +L
Sbjct: 272 ISNISP--LAGLTALTNLELNENQLEDI-SPISNLKNLTYLTLYFNNISDISP--VSSLT 326
Query: 260 VLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300
L R+ F NN + D+ +++ L ++ +LS GHN++ P
Sbjct: 327 KLQRL-FFYNNKVSDV-SSLANLTNINWLSAGHNQISDLTP 365
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 46/193 (23%)
Query: 368 PQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF--------- 417
PQ ++R + F ++G GSF +V AR L E+AIK+
Sbjct: 1 PQPRKKR---------PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN 51
Query: 418 -----------------------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQ 454
+F+ +++ L Y NG L K + +
Sbjct: 52 KVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT 111
Query: 455 RLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514
R ++ SALEYLH IIH DLKP N LL++++ ++DFG AK+L+ E +
Sbjct: 112 RF-YTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 167
Query: 515 QTQTLAIIGYMAP 527
+ Y++P
Sbjct: 168 ANXFVGTAQYVSP 180
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 79/193 (40%), Gaps = 46/193 (23%)
Query: 368 PQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF--------- 417
PQ ++R + F ++G GSF +V AR L E+AIK+
Sbjct: 2 PQPRKKR---------PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN 52
Query: 418 -----------------------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQ 454
+F+ +++ L Y NG L K + +
Sbjct: 53 KVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT 112
Query: 455 RLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514
R ++ SALEYLH IIH DLKP N LL++++ ++DFG AK+L+ E +
Sbjct: 113 RF-YTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR 168
Query: 515 QTQTLAIIGYMAP 527
+ Y++P
Sbjct: 169 ANXFVGTAQYVSP 181
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 37/183 (20%)
Query: 378 QELLRATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF------------------- 417
Q + + F ++G GSF +V AR L E+AIK+
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 60
Query: 418 -------------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTS 464
+F+ +++ L Y NG L K + + R ++ S
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVS 119
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
ALEYLH IIH DLKP N LL++++ ++DFG AK+L+ E + + Y
Sbjct: 120 ALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 525 MAP 527
++P
Sbjct: 177 VSP 179
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 75/179 (41%), Gaps = 37/179 (20%)
Query: 382 RATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------- 417
+ + F ++G GSF +V AR L E+AIK+
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 418 ---------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEY 468
+F+ +++ L Y NG L K + + R ++ SALEY
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEY 122
Query: 469 LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LH IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 123 LH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 204
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 150
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 151 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 204
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 152
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 153 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 206
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSP 201
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 131
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 132 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 185
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 203
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 200
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 149
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 150 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSP 203
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 74/176 (42%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF +V AR L E+AIK+
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 146
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 147 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 200
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFH------------------------- 418
+ F ++G GSF +V AR L E+AIK+
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 419 ------FSCSNEDFRALV-LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+ C +D + L Y NG L K + + R ++ SALEYLH
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 154
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 155 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 73/182 (40%), Gaps = 48/182 (26%)
Query: 391 NLIGRGSFGSVYKARLQDGMEFAIKVFHFS--------------------------CSNE 424
LIGRG +G+VYK L D A+KVF F+ +E
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 425 DFRA-------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF------ 471
A LV+EY NGSL K Y S + D + + VT L YLH
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXK--YLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGD 135
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE------DQSMTQTQTLAIIGYM 525
Y I H DL N L+ ++ +SDFG++ LTG ++ + I YM
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM 195
Query: 526 AP 527
AP
Sbjct: 196 AP 197
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F ++G GSF + AR L E+AIK+
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
+F+ +++ L Y NG L K + + R ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH- 147
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLKP N LL++++ ++DFG AK+L+ E + + Y++P
Sbjct: 148 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 201
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-FGYSTPIIHCDLKPHNK 487
+V EY NGSL+ L + + I+Q + ++ V + + YL GY +H DL N
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNV 182
Query: 488 LLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQTLAIIGYMAP 527
L+D N+V +SDFG++++L + D + T T I + AP
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAP 223
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-FGYSTPIIHCDLKPHNK 487
+V EY NGSL+ L + + I+Q + ++ V + + YL GY +H DL N
Sbjct: 127 IVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY----VHRDLAARNV 182
Query: 488 LLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQTLAIIGYMAP 527
L+D N+V +SDFG++++L + D + T T I + AP
Sbjct: 183 LVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAP 223
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 76/177 (42%), Gaps = 40/177 (22%)
Query: 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR---- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 37 EFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 428 --------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+V EY NGSL+ L + ++Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 462 VTSALEYL-HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
+ S ++YL GY +H DL N L++ N+V +SDFG+A++L + ++ T+
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTR 208
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 40/176 (22%)
Query: 377 YQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR----- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 26 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 428 -------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDV 462
+V EY NGSL+ L + ++Q + ++ +
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 144
Query: 463 TSALEYLH-FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
S ++YL GY +H DL N L++ N+V +SDFG++++L + ++ T+
Sbjct: 145 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 40/176 (22%)
Query: 377 YQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR----- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 9 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 428 -------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDV 462
+V EY NGSL+ L + ++Q + ++ +
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGI 127
Query: 463 TSALEYLH-FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
S ++YL GY +H DL N L++ N+V +SDFG++++L + ++ T+
Sbjct: 128 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 77/193 (39%), Gaps = 37/193 (19%)
Query: 365 NMQPQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHF-SCSN 423
++P+ R Y E+ + S IG GSFG+VYK + + A+K+ +
Sbjct: 18 KIRPRGQRDSSYYWEIEASEVMLSTR--IGSGSFGTVYKGKWHG--DVAVKILKVVDPTP 73
Query: 424 EDFRA-----------------------------LVLEYTTNGSLEKVLYSSNYILDILQ 454
E F+A +V ++ SL K L+ + Q
Sbjct: 74 EQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQ 133
Query: 455 RLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514
++I ++YLH + IIH D+K +N L + + + DFG+A + + S
Sbjct: 134 LIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190
Query: 515 QTQTLAIIGYMAP 527
Q + +MAP
Sbjct: 191 VEQPTGSVLWMAP 203
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 41/188 (21%)
Query: 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR---- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 37 EFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 428 --------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+V EY NGSL+ L + ++Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 462 VTSALEYL-HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+ S ++YL GY +H DL N L++ N+V +SDFG++++L + ++ T+
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 521 I-IGYMAP 527
I I + +P
Sbjct: 212 IPIRWTSP 219
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 41/188 (21%)
Query: 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR---- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 37 EFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 428 --------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+V EY NGSL+ L + ++Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 462 VTSALEYL-HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+ S ++YL GY +H DL N L++ N+V +SDFG++++L + ++ T+
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 521 I-IGYMAP 527
I I + +P
Sbjct: 212 IPIRWTSP 219
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 81/188 (43%), Gaps = 41/188 (21%)
Query: 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR---- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 37 EFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 428 --------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+V EY NGSL+ L + ++Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 462 VTSALEYL-HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+ S ++YL GY +H DL N L++ N+V +SDFG++++L + ++ T+
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 521 I-IGYMAP 527
I I + +P
Sbjct: 212 IPIRWTSP 219
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 40/177 (22%)
Query: 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR---- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 37 EFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 428 --------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+V EY NGSL+ L + ++Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 462 VTSALEYL-HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
+ S ++YL GY +H DL N L++ N+V +SDFG++++L + ++ T+
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 65/179 (36%), Gaps = 48/179 (26%)
Query: 390 NNLIGRGSFGSVYKARLQDGMEFAIKVFHFS----------------------------- 420
+IG G FG VY+A G E A+K
Sbjct: 12 EEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 421 ----CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
C E LV+E+ G L +VL DIL +N + + + YLH P
Sbjct: 71 LRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVP 128
Query: 477 IIHCDLKPHNKLLDDNI--------VAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IIH DLK N L+ + + ++DFG+A+ E T+ +MAP
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAP 183
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 40/177 (22%)
Query: 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR---- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 35 EFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 93
Query: 428 --------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+V EY NGSL+ L + ++Q + ++
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 153
Query: 462 VTSALEYL-HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
+ S ++YL GY +H DL N L++ N+V +SDFG++++L + ++ T+
Sbjct: 154 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+ EY G+L ++ S + QR++ D+ S + YLH S IIH DL HN L
Sbjct: 84 FITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCL 140
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTL 519
+ +N ++DFG+A+L+ E TQ + L
Sbjct: 141 VRENKNVVVADFGLARLMVDEK---TQPEGL 168
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 41/188 (21%)
Query: 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR---- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 37 EFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 428 --------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+V EY NGSL+ L + ++Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 462 VTSALEYL-HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+ S ++YL GY +H DL N L++ N+V +SDFG+ ++L + ++ T+
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGK 211
Query: 521 I-IGYMAP 527
I I + +P
Sbjct: 212 IPIRWTSP 219
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 58/101 (57%), Gaps = 6/101 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-FGYSTPIIHCDLKPHNK 487
+V EY NGSL+ L ++ ++Q + ++ +++ ++YL GY +H DL N
Sbjct: 100 IVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGY----VHRDLAARNI 155
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L++ N+V +SDFG++++L + ++ T+ I I + AP
Sbjct: 156 LINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAP 196
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 41/175 (23%)
Query: 390 NNLIGRGSFGSVYKARLQDG-----MEFAIKVF--------------------HFSCSN- 423
+IG G FG VYK L+ + AIK FS N
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 424 -------EDFRALVL--EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL-HFGY 473
++ +++ EY NG+L+K L + +LQ + ++ + + ++YL + Y
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNY 168
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL N L++ N+V +SDFG++++L + ++ T I I + AP
Sbjct: 169 ----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 41/188 (21%)
Query: 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR---- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 37 EFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 428 --------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+V EY NGSL+ L + ++Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 462 VTSALEYL-HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+ S ++YL G+ +H DL N L++ N+V +SDFG++++L + ++ T+
Sbjct: 156 IASGMKYLSDMGF----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 521 I-IGYMAP 527
I I + +P
Sbjct: 212 IPIRWTSP 219
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 73/194 (37%), Gaps = 45/194 (23%)
Query: 375 FSYQELLRATDGFS------ANNLIGRGSFGSVYKA---------------------RLQ 407
FS+ EL T+ F N +G G FG VYK L+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 408 DGMEFAIKVFH------------FSCSNEDFRALVLEYTTNGSLEKVL--YSSNYILDIL 453
+ IKV FS +D LV Y NGSL L L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 454 QRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513
R I + + +LH + IH D+K N LLD+ A +SDFG+A+ Q++
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 514 TQTQTLAIIGYMAP 527
++ + YMAP
Sbjct: 191 MXSRIVGTTAYMAP 204
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 9/149 (6%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKV-FHFSCSNEDFRALVLEYTTNGS 438
+ A + + R +V+K ++ G+E V +S +E+ +V++ G
Sbjct: 42 MYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGD 101
Query: 439 LEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLS 498
L L + + + +L I ++ AL+YL + IIH D+KP N LLD++ H++
Sbjct: 102 LRYHLQQNVHFKEETVKLFI-CELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHIT 157
Query: 499 DFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DF IA +L E Q T T YMAP
Sbjct: 158 DFNIAAMLPRETQITTMAGTKP---YMAP 183
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
++ EY NGSL+ L ++ ++Q + ++ + S ++YL +H DL N L
Sbjct: 107 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNIL 163
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
++ N+V +SDFG++++L + ++ T+ I I + AP
Sbjct: 164 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 203
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
F+ CS E +V EY +NG L L S L+ Q L + DV + +L S
Sbjct: 68 FYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQ 124
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IH DL N L+D ++ +SDFG+ + + +DQ ++ T + + AP
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAP 174
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
++ EY NGSL+ L ++ ++Q + ++ + S ++YL +H DL N L
Sbjct: 86 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNIL 142
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
++ N+V +SDFG++++L + ++ T+ I I + AP
Sbjct: 143 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 69/170 (40%), Gaps = 35/170 (20%)
Query: 387 FSANNLIGRGSFGSVYKA-RLQDGMEFAIK-------------------------VFHFS 420
F +G GS+GSVYKA + G AIK V +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 421 CS---NEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
S N D +V+EY GS+ ++ N L + I+ LEYLHF
Sbjct: 91 GSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK--- 146
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IH D+K N LL+ A L+DFG+A LT D + + +MAP
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAP 194
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
++ EY NGSL+ L ++ ++Q + ++ + S ++YL +H DL N L
Sbjct: 92 IITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNIL 148
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
++ N+V +SDFG++++L + ++ T+ I I + AP
Sbjct: 149 VNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 72/194 (37%), Gaps = 45/194 (23%)
Query: 375 FSYQELLRATDGFS------ANNLIGRGSFGSVYKA---------------------RLQ 407
FS+ EL T+ F N +G G FG VYK L+
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 74
Query: 408 DGMEFAIKVFH------------FSCSNEDFRALVLEYTTNGSLEKVL--YSSNYILDIL 453
+ IKV FS +D LV Y NGSL L L
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGTPPLSWH 133
Query: 454 QRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513
R I + + +LH + IH D+K N LLD+ A +SDFG+A+ Q++
Sbjct: 134 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV 190
Query: 514 TQTQTLAIIGYMAP 527
+ + YMAP
Sbjct: 191 MXXRIVGTTAYMAP 204
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 40/176 (22%)
Query: 377 YQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR----- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 9 FAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 428 -------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDV 462
+V E NGSL+ L + ++Q + ++ +
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGI 127
Query: 463 TSALEYLH-FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
S ++YL GY +H DL N L++ N+V +SDFG++++L + ++ T+
Sbjct: 128 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 41/188 (21%)
Query: 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR---- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 37 EFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 428 --------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+V E NGSL+ L + ++Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 462 VTSALEYL-HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+ S ++YL GY +H DL N L++ N+V +SDFG++++L + ++ T+
Sbjct: 156 IASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 521 I-IGYMAP 527
I I + +P
Sbjct: 212 IPIRWTSP 219
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 71/194 (36%), Gaps = 45/194 (23%)
Query: 375 FSYQELLRATDGFS------ANNLIGRGSFGSVYKA---------------------RLQ 407
FS+ EL T+ F N +G G FG VYK L+
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 68
Query: 408 DGMEFAIKVFH------------FSCSNEDFRALVLEYTTNGSLEKVL--YSSNYILDIL 453
+ IKV FS +D LV Y NGSL L L
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDL-CLVYVYMPNGSLLDRLSCLDGTPPLSWH 127
Query: 454 QRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513
R I + + +LH + IH D+K N LLD+ A +SDFG+A+ Q +
Sbjct: 128 MRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 184
Query: 514 TQTQTLAIIGYMAP 527
+ + YMAP
Sbjct: 185 MXXRIVGTTAYMAP 198
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 66/166 (39%), Gaps = 45/166 (27%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIK------------------------ 415
LR F ++G+G+FG V KAR D +AIK
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 416 --VFHFSCSNEDFRALV---------------LEYTTNGSLEKVLYSSNYILDILQRLNI 458
V + + + R V +EY NG+L +++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
+ AL Y+H S IIH DLKP N +D++ + DFG+AK
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 74/183 (40%), Gaps = 27/183 (14%)
Query: 349 LISRCQKRATKLPNVSNMQPQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQD 408
++ RC RAT + + + R S ++L + I R G + L D
Sbjct: 109 VVRRCVHRATGHEFAVKIM-EVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167
Query: 409 GME---FAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSA 465
E F VF E F +Y T EKV S I++ L
Sbjct: 168 SYESSSFMFLVFDLMRKGELF-----DYLT----EKVALSEKETRSIMRSL--------- 209
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGY 524
LE + F ++ I+H DLKP N LLDDN+ LSDFG + L GE + GY
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----KLRELCGTPGY 265
Query: 525 MAP 527
+AP
Sbjct: 266 LAP 268
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L++S ++ + ++I ++YLH + IIH DL
Sbjct: 78 TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDL 134
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L ++ + DFG+A + + S Q I +MAP
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 179
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 68/170 (40%), Gaps = 40/170 (23%)
Query: 392 LIGRGSFGSVYKARLQ-DGMEFAIKVF--------------------------------- 417
+IG+GSFG V AR + + + +A+KV
Sbjct: 45 VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGL 104
Query: 418 HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
HFS D VL+Y G L L L+ R ++ SAL YLH S I
Sbjct: 105 HFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SLNI 160
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++ DLKP N LLD L+DFG+ K + + T + Y+AP
Sbjct: 161 VYRDLKPENILLDSQGHIVLTDFGLCK--ENIEHNSTTSTFCGTPEYLAP 208
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 6/126 (4%)
Query: 107 LPRVVGNFSQSLEFIWMSDCNISG---GISEEIGNLTDLISIDLGGNKLNGSISITLGKL 163
LP + ++LE +W++D + G+ +++ NL +L L N+L L
Sbjct: 76 LPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAEL---RLDRNQLKSLPPRVFDSL 132
Query: 164 QKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNE 223
KL +LS NEL+ V L L +L L N+L F LT L+ L LD+N+
Sbjct: 133 TKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQ 192
Query: 224 LTSIPS 229
L +P
Sbjct: 193 LKRVPE 198
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Query: 140 TDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNK 199
D +DL NKL+ S +L KL+ L N+L+ + L L L + NK
Sbjct: 37 ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96
Query: 200 LSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN-LKDILYLDFWSNLFVGPLPSKIGNL 258
L F L L L LD N+L S+P +++ L + YL N LP G
Sbjct: 97 LQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPK--GVF 153
Query: 259 KVLTRIDFSR--NNLLGDIPT-TIQGLKSLQFLSLGHNRLQ 296
LT + R NN L +P L L+ L L +N+L+
Sbjct: 154 DKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK 194
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 71/194 (36%), Gaps = 26/194 (13%)
Query: 30 NKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSSIVDEL-SLSDNYLTSSTPELSFLSSMS 88
NKL + S L+ L++ +++N + + I EL +L ++T + + +
Sbjct: 47 NKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFD 106
Query: 89 NCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLG 148
L +L + RN L PRV +LT L + LG
Sbjct: 107 QLVNLAELRLDRNQLKSLPPRV-------------------------FDSLTKLTYLSLG 141
Query: 149 GNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCF 208
N+L KL L+ L N+L+ L L L L N+L F
Sbjct: 142 YNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAF 201
Query: 209 GNLTALRNLHLDSN 222
+L L+ L L N
Sbjct: 202 DSLEKLKMLQLQEN 215
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C+ + ++ EY NG L L + Q L + DV A+EYL S +H
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS 512
DL N L++D V +SDFG+++ + ++++
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEET 176
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 45/167 (26%)
Query: 386 GFSANNLIGRGSFGSVYKARLQDGMEFAIK----------------------------VF 417
++ +IG GSFG V++A+L + E AIK F
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 418 HFS---CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNI------MIDVTSALEY 468
+S +E F LVLEY E V +S + + Q + + M + +L Y
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVP----ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 469 LHFGYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAKLLTGEDQSMT 514
+H S I H D+KP N LLD + V L DFG AK+L + +++
Sbjct: 157 IH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS 200
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 43 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L+ ++++ ++I ++YLH + IIH DL
Sbjct: 101 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDL 157
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L +++ + DFG+A + + S Q I +MAP
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 202
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L+ ++++ ++I ++YLH + IIH DL
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDL 158
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L +++ + DFG+A + + S Q I +MAP
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 203
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 127 NISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPN-VLC 185
++ G+ +E+ +LT L LGGNKL + KL L +L+ N+L+ S+PN V
Sbjct: 42 SLPNGVFDELTSLTQLY---LGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFD 97
Query: 186 HLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
L L +L L N+L F LT L++L L N+L S+P
Sbjct: 98 KLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVP 140
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 125 DCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPN-V 183
+C G S G +DL N L + +L L L GN+L+ S+PN V
Sbjct: 13 ECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGV 71
Query: 184 LCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
L L L+L N+L F LT L+ L L++N+L S+P
Sbjct: 72 FNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLP 116
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L+ ++++ ++I ++YLH + IIH DL
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDL 135
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L +++ + DFG+A + + S Q I +MAP
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L+ ++++ ++I ++YLH + IIH DL
Sbjct: 79 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDL 135
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L +++ + DFG+A + + S Q I +MAP
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 180
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 39/149 (26%)
Query: 391 NLIGRGSFGSVYKARLQDGMEFA----IKVFHFSCSNEDFR------------------- 427
+ +G G F +VYKAR ++ + IK+ H S + +
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNII 75
Query: 428 ------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYST 475
+LV ++ LE ++ ++ +L M+ LEYLH +
Sbjct: 76 GLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW-- 132
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
I+H DLKP+N LLD+N V L+DFG+AK
Sbjct: 133 -ILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L+ ++++ ++I ++YLH + IIH DL
Sbjct: 76 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDL 132
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L +++ + DFG+A + + S Q I +MAP
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 177
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L+ ++++ ++I ++YLH + IIH DL
Sbjct: 74 TAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDL 130
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L +++ + DFG+A + + S Q I +MAP
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L+ ++++ ++I ++YLH + IIH DL
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDL 130
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L +++ + DFG+A + + S Q I +MAP
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAP 175
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L++S ++ + ++I ++YLH + IIH DL
Sbjct: 90 TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDL 146
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L ++ + DFG+A + S Q I +MAP
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL-HFGYSTPIIHCDLKPHNK 487
+V+E+ NG+L+ L + ++Q + ++ + + + YL GY +H DL N
Sbjct: 121 IVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGY----VHRDLAARNI 176
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L++ N+V +SDFG+++++ + +++ T I + + AP
Sbjct: 177 LVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAP 217
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L++S ++ + ++I ++YLH + IIH DL
Sbjct: 90 TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDL 146
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L ++ + DFG+A + S Q I +MAP
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 191
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 3/101 (2%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C+ + ++ EY NG L L + Q L + DV A+EYL S +H
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
DL N L++D V +SDFG+++ + ++ + ++ +
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPV 170
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 39/187 (20%)
Query: 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCSNEDFR---- 427
+ + L AT+ S + ++G G FG V RL+ + AIK + + R
Sbjct: 37 EFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 428 --------------------------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+V E NGSL+ L + ++Q + ++
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRG 155
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
+ S ++YL +H DL N L++ N+V +SDFG++++L + ++ T+ I
Sbjct: 156 IASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI 212
Query: 522 -IGYMAP 527
I + +P
Sbjct: 213 PIRWTSP 219
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 55/186 (29%)
Query: 390 NNLIGRGSFGSVYKARLQ-DG--MEFAIKVFHFSCSNEDFR------------------- 427
++IG G+FG V KAR++ DG M+ AIK S +D R
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 428 ------------ALVLEYTTNGSLEKVLYSSNYI---------------LDILQRLNIMI 460
L +EY +G+L L S + L Q L+
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 461 DVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
DV ++YL IH DL N L+ +N VA ++DFG+++ G++ + +T
Sbjct: 140 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 193
Query: 521 IIGYMA 526
+ +MA
Sbjct: 194 PVRWMA 199
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 106/241 (43%), Gaps = 28/241 (11%)
Query: 28 SQNKLVGIVSIT---IFNLSTLKVFDVDNNYVLGRLSS---IVDELSLSDNYLTS-STPE 80
S+NK+V ++ ++NL +L+V D D Y+ R S +++L+L LTS T
Sbjct: 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEA 171
Query: 81 LSFLS------------------SMSNCKYLKKLDISRNP-LDGFLPRVVGNFSQSLEFI 121
LS L S LK L+IS P LD P + + +L +
Sbjct: 172 LSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCL--YGLNLTSL 229
Query: 122 WMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIP 181
++ CN++ + +L L ++L N ++ L +L +LQ + G +L P
Sbjct: 230 SITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP 289
Query: 182 NVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLD 241
L L L++ GN+L+ + F ++ L L LDSN L +LW + L+
Sbjct: 290 YAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLN 349
Query: 242 F 242
F
Sbjct: 350 F 350
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 45/106 (42%), Gaps = 23/106 (21%)
Query: 190 LFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVG 249
L +L+L N +S P F NL LR L L SN L IP +F G
Sbjct: 58 LEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPL---------------GVFTG 102
Query: 250 PLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRL 295
L LT++D S N ++ + Q L +L+ L +G N L
Sbjct: 103 --------LSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDL 140
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C+ + ++ EY NG L L + Q L + DV A+EYL S +H
Sbjct: 88 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 144
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLL 506
DL N L++D V +SDFG+++ +
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYV 170
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 55/186 (29%)
Query: 390 NNLIGRGSFGSVYKARLQ-DG--MEFAIKVFHFSCSNEDFR------------------- 427
++IG G+FG V KAR++ DG M+ AIK S +D R
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 428 ------------ALVLEYTTNGSLEKVLYSSNYI---------------LDILQRLNIMI 460
L +EY +G+L L S + L Q L+
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 461 DVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
DV ++YL IH DL N L+ +N VA ++DFG+++ G++ + +T
Sbjct: 150 DVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 203
Query: 521 IIGYMA 526
+ +MA
Sbjct: 204 PVRWMA 209
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C+ + ++ EY NG L L + Q L + DV A+EYL S +H
Sbjct: 79 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 135
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLL 506
DL N L++D V +SDFG+++ +
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYV 161
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C+ + ++ EY NG L L + Q L + DV A+EYL S +H
Sbjct: 73 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510
DL N L++D V +SDFG+++ + ++
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 159
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 6/102 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
++ E+ NG+L+ L ++ ++Q + ++ + S + YL +H DL N L
Sbjct: 94 ILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLAARNIL 150
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA---IIGYMAP 527
++ N+V +SDFG+++ L T+T +L I + AP
Sbjct: 151 VNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 414 IKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
IK++ + DF +V+EY + G L + + ++ R + + SA++Y H
Sbjct: 74 IKLYQVISTPTDF-FMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH--- 128
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507
++H DLKP N LLD ++ A ++DFG++ +++
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
++ E+ NGSL+ L ++ ++Q + ++ + + ++YL +H DL N L
Sbjct: 111 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNIL 167
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG 523
++ N+V +SDFG+++ L ED + T T A+ G
Sbjct: 168 VNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGG 200
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C+ + ++ EY NG L L + Q L + DV A+EYL S +H
Sbjct: 72 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 128
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510
DL N L++D V +SDFG+++ + ++
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 158
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 70/194 (36%), Gaps = 45/194 (23%)
Query: 375 FSYQELLRATDGFS------ANNLIGRGSFGSVYKA---------------------RLQ 407
FS+ EL T+ F N G G FG VYK L+
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELK 65
Query: 408 DGMEFAIKV------------FHFSCSNEDFRALVLEYTTNGSLEKVL--YSSNYILDIL 453
+ IKV FS +D LV Y NGSL L L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDL-CLVYVYXPNGSLLDRLSCLDGTPPLSWH 124
Query: 454 QRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513
R I + + +LH + IH D+K N LLD+ A +SDFG+A+ Q +
Sbjct: 125 XRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXV 181
Query: 514 TQTQTLAIIGYMAP 527
++ + Y AP
Sbjct: 182 XXSRIVGTTAYXAP 195
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 414 IKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
IK++ + DF +V+EY + G L + + ++ R + + SA++Y H
Sbjct: 74 IKLYQVISTPTDF-FMVMEYVSGGELFDYICKHGRVEEMEAR-RLFQQILSAVDYCH--- 128
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507
++H DLKP N LLD ++ A ++DFG++ +++
Sbjct: 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 418 HFSC---SNEDFRALVLEY--TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 142 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C+ + ++ EY NG L L + Q L + DV A+EYL S +H
Sbjct: 68 CTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHR 124
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510
DL N L++D V +SDFG+++ + ++
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDE 154
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
+ F NL+G+GSF VY+A + G+E AIK+
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 418 --------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
+F SN + LVLE NG + + L + + + M + + + YL
Sbjct: 71 PSILELYNYFEDSN--YVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506
H S I+H DL N LL N+ ++DFG+A L
Sbjct: 129 H---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 49/164 (29%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 160
Query: 418 HFSC---SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNI------MIDVTSALEY 468
+S +E + LVL+Y E V + + Q L + M + +L Y
Sbjct: 161 FYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 469 LH-FGYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
+H FG I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 217 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 256
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 49/164 (29%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 418 HFSC---SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNI------MIDVTSALEY 468
+S +E + LVL+Y E V + + Q L + M + +L Y
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 469 LH-FGYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
+H FG I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 172 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 142 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 154
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 155 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 190
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 49/164 (29%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 418 HFSC---SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNI------MIDVTSALEY 468
+S +E + LVL+Y E V + + Q L + M + +L Y
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 469 LH-FGYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
+H FG I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 176 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 215
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 149
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 150 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 185
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 49/164 (29%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 418 HFSC---SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNI------MIDVTSALEY 468
+S +E + LVL+Y E V + + Q L + M + +L Y
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 469 LH-FGYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
+H FG I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 172 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 211
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 49/164 (29%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 117
Query: 418 HFSC---SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNI------MIDVTSALEY 468
+S +E + LVL+Y E V + + Q L + M + +L Y
Sbjct: 118 FYSSGEKKDEVYLNLVLDYVP----ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 469 LH-FGYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
+H FG I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 174 IHSFG----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 213
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 7/107 (6%)
Query: 422 SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCD 481
+D LV+EY +L + + S+ L + +N + +++ H I+H D
Sbjct: 81 EEDDCYYLVMEYIEGPTLSEYI-ESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRD 136
Query: 482 LKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQT-QTLAIIGYMAP 527
+KP N L+D N + DFGIAK L+ + S+TQT L + Y +P
Sbjct: 137 IKPQNILIDSNKTLKIFDFGIAKALS--ETSLTQTNHVLGTVQYFSP 181
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 85
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 86 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 145
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 146 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 181
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 160
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 161 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 196
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 154 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 189
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 142 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 44 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L+ ++++ ++I ++YLH + IIH DL
Sbjct: 102 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDL 158
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L +++ + DFG+A + S Q I +MAP
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 203
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLDHCNIVRLRYF 81
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 142 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 142 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 153
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 154 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 189
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 82 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 142 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 169
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 170 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 36 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 93
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L+ ++++ ++I ++YLH + IIH DL
Sbjct: 94 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDL 150
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L +++ + DFG+A + S Q I +MAP
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 195
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 82
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 83 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 142
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 143 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 178
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 68/160 (42%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFA-----------------------------IKVF 417
++ +IG GSFG VY+A+L D E ++ F
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 418 HFSC---SNEDFRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
+S +E + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 146
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 147 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 182
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 40/181 (22%)
Query: 384 TDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNED-----FR---------- 427
+D + ++G G V+ AR L+D + A+KV + + FR
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 428 --ALVLEYTTNGSLEKVLYSSNYIL----------DILQRLNIMID------VTSALEYL 469
A+V Y T G E YI+ DI+ M + A + L
Sbjct: 71 HPAIVAVYDT-GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMA 526
+F + IIH D+KP N ++ + DFGIA+ + D + TQT A+IG Y++
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLS 187
Query: 527 P 527
P
Sbjct: 188 P 188
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 40/181 (22%)
Query: 384 TDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNED-----FR---------- 427
+D + ++G G V+ AR L+D + A+KV + + FR
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 428 --ALVLEYTTNGSLEKVLYSSNYIL----------DILQRLNIMID------VTSALEYL 469
A+V Y T G E YI+ DI+ M + A + L
Sbjct: 71 HPAIVAVYDT-GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMA 526
+F + IIH D+KP N ++ + DFGIA+ + D + TQT A+IG Y++
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLS 187
Query: 527 P 527
P
Sbjct: 188 P 188
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 35/165 (21%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSN----EDFR--------------------- 427
IG GSFG+VYK + + A+K+ + + + F+
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 428 -----ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
A+V ++ SL L+ ++++ ++I ++YLH + IIH DL
Sbjct: 74 TKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDL 130
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K +N L +++ + DFG+A + S Q I +MAP
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAP 175
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 425 DFRALVLEYTTNGSLEKVLYSSNYILDILQR--LNIMIDVTSALEYLHFGYSTPIIHCDL 482
D L +EY G L K L + + ++ D++SAL YLH IIH DL
Sbjct: 92 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDL 148
Query: 483 KPHNKLLD---DNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
KP N +L ++ + D G AK L DQ T+ + + Y+AP
Sbjct: 149 KPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAP 193
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 425 DFRALVLEYTTNGSLEKVLYSSNYILDILQR--LNIMIDVTSALEYLHFGYSTPIIHCDL 482
D L +EY G L K L + + ++ D++SAL YLH IIH DL
Sbjct: 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDL 147
Query: 483 KPHNKLLD---DNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
KP N +L ++ + D G AK L DQ T+ + + Y+AP
Sbjct: 148 KPENIVLQPGPQRLIHKIIDLGYAKEL---DQGELCTEFVGTLQYLAP 192
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
++++Y G L +L S + + + +V ALEYLH S II+ DLKP N L
Sbjct: 83 MIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH---SKDIIYRDLKPENIL 138
Query: 489 LDDNIVAHLSDFGIAKLL 506
LD N ++DFG AK +
Sbjct: 139 LDKNGHIKITDFGFAKYV 156
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV E+ +G L L + + L + +DV + YL +IH DL N L
Sbjct: 79 LVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCL 135
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ +N V +SDFG+ + + +DQ + T T + + +P
Sbjct: 136 VGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 173
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
LV E+ +G L L + + L + +DV + YL +IH DL N
Sbjct: 81 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 137
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L+ +N V +SDFG+ + + +DQ + T T + + +P
Sbjct: 138 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 176
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 69/160 (43%), Gaps = 41/160 (25%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEF-AIK-----------------------------V 416
++ +IG GSFG VY+A+L D E AIK
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYF 81
Query: 417 FHFSCSNED--FRALVLEYT--TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH-F 471
F+ S +D + LVL+Y T + + + L ++ M + +L Y+H F
Sbjct: 82 FYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141
Query: 472 GYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAK-LLTGE 509
G I H D+KP N LLD D V L DFG AK L+ GE
Sbjct: 142 G----ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE 177
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 62/166 (37%), Gaps = 34/166 (20%)
Query: 390 NNLIGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDF----------------------- 426
++GRG+FG V KA+ + + AIK + F
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL 72
Query: 427 --RALVLEYTTNGSLEKVLYSSNYI--LDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
LV+EY GSL VL+ + + ++ + + + YLH +IH DL
Sbjct: 73 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 132
Query: 483 KPHNKLL-DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
KP N LL V + DFG T D T +MAP
Sbjct: 133 KPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNKGSAAWMAP 173
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY +L ++++ + + + ++ D A + L+F + IIH D+KP N +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPMTP-KRAIEVIAD---ACQALNFSHQNGIIHRDVKPANIM 148
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
+ + DFGIA+ + D + TQT A+IG Y++P
Sbjct: 149 ISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSP 188
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY +L ++++ + + + ++ D A + L+F + IIH D+KP N +
Sbjct: 93 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIAD---ACQALNFSHQNGIIHRDVKPANIM 148
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
+ + DFGIA+ + D + TQT A+IG Y++P
Sbjct: 149 ISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSP 188
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 62/166 (37%), Gaps = 34/166 (20%)
Query: 390 NNLIGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDF----------------------- 426
++GRG+FG V KA+ + + AIK + F
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL 71
Query: 427 --RALVLEYTTNGSLEKVLYSSNYI--LDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
LV+EY GSL VL+ + + ++ + + + YLH +IH DL
Sbjct: 72 NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDL 131
Query: 483 KPHNKLL-DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
KP N LL V + DFG T D T +MAP
Sbjct: 132 KPPNLLLVAGGTVLKICDFG-----TACDIQTHMTNNKGSAAWMAP 172
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
Query: 387 FSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSC--SNEDFRALV------------- 430
FS IG GSFG+VY AR +++ AIK +S SNE ++ ++
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 431 ---------LEYTTNGSLEKVLYSSNYILDI----LQRLNIMIDVTSALEYLHFGYSTPI 477
E+T +E L S++ +L++ LQ + I AL+ L + +S +
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507
IH D+K N LL + + L DFG A ++
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFGSASIMA 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
LV E+ +G L L + + L + +DV + YL +IH DL N
Sbjct: 78 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 134
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L+ +N V +SDFG+ + + +DQ + T T + + +P
Sbjct: 135 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 173
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY +L ++++ + + + ++ D A + L+F + IIH D+KP N +
Sbjct: 110 IVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIAD---ACQALNFSHQNGIIHRDVKPANIM 165
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
+ + DFGIA+ + D + TQT A+IG Y++P
Sbjct: 166 ISATNAVKVMDFGIARAIA--DSGNSVTQTAAVIGTAQYLSP 205
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 65/166 (39%), Gaps = 45/166 (27%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIK------------------------ 415
LR F ++G+G+FG V KAR D +AIK
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNH 61
Query: 416 --VFHFSCSNEDFRALV---------------LEYTTNGSLEKVLYSSNYILDILQRLNI 458
V + + + R V +EY N +L +++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
+ AL Y+H S IIH DLKP N +D++ + DFG+AK
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
LV E+ +G L L + + L + +DV + YL +IH DL N
Sbjct: 98 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 154
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L+ +N V +SDFG+ + + +DQ + T T + + +P
Sbjct: 155 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 193
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
LV E+ +G L L + + L + +DV + YL +IH DL N
Sbjct: 76 CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 132
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L+ +N V +SDFG+ + + +DQ + T T + + +P
Sbjct: 133 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 171
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
++ E+ NG+L+ L ++ ++Q + ++ + S + YL +H DL N L
Sbjct: 92 ILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLAARNIL 148
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA---IIGYMAP 527
++ N+V +SDFG+++ L T T +L I + AP
Sbjct: 149 VNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAP 190
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 21/134 (15%)
Query: 128 ISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHL 187
+ G+ +++ NL +L+ ++ N+L KL L +L N+L+ V L
Sbjct: 100 LPNGVFDKLTNLKELVLVE---NQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKL 156
Query: 188 AVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP----------SILWNL--- 234
L +LDL N+L F LT L+ L L+ N+L S+P + +W L
Sbjct: 157 TNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIWLLNNP 216
Query: 235 -----KDILYLDFW 243
DILYL W
Sbjct: 217 WDCACSDILYLSRW 230
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 30/157 (19%)
Query: 147 LGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPN-VLCHLAVLFQLDLRGNKLSGSIP 205
LGGNKL+ IS L +L L +L GN+L+ S+PN V L L +L L N+L
Sbjct: 70 LGGNKLH-DIS-ALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPD 126
Query: 206 TCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRID 265
F LT L L+L N+L S+P +++ K+ N LTR+D
Sbjct: 127 GVFDKLTNLTYLYLYHNQLQSLPKGVFD--------------------KLTN---LTRLD 163
Query: 266 FSRNNLLGDIPTTI-QGLKSLQFLSLGHNRLQGSIPN 301
NN L +P + L L+ LSL N+L+ S+P+
Sbjct: 164 LD-NNQLQSLPEGVFDKLTQLKQLSLNDNQLK-SVPD 198
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 134 EEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQL 193
+E+ NLT LI L GN+L + KL L+ L N+L+ V L L L
Sbjct: 82 KELTNLTYLI---LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 194 DLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229
L N+L F LT L L LD+N+L S+P
Sbjct: 139 YLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPE 174
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
Query: 387 FSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSC--SNEDFRALV------------- 430
FS IG GSFG+VY AR +++ AIK +S SNE ++ ++
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 431 ---------LEYTTNGSLEKVLYSSNYILDI----LQRLNIMIDVTSALEYLHFGYSTPI 477
E+T +E L S++ +L++ LQ + I AL+ L + +S +
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507
IH D+K N LL + + L DFG A ++
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFGSASIMA 166
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 81/214 (37%), Gaps = 52/214 (24%)
Query: 354 QKRATKLPNVSNMQPQ-ASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKAR-LQDGME 411
Q + + P V QPQ A R Y L F IGRG F VY+A L DG+
Sbjct: 4 QSQGMQGPPVPQFQPQKALRPDMGYNTLA----NFRIEKKIGRGQFSEVYRAACLLDGVP 59
Query: 412 FAIKVFH-FSCSNEDFRA-------------------------------LVLEYTTNGSL 439
A+K F + RA +VLE G L
Sbjct: 60 VALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119
Query: 440 EKVLYSSNYILDILQRLNI---MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAH 496
+++ ++ + + + SALE++H S ++H D+KP N + V
Sbjct: 120 SRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVK 176
Query: 497 LSDFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
L D G+ + + + T +++G YM+P
Sbjct: 177 LGDLGLGRFFSSK-----TTAAHSLVGTPYYMSP 205
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 74/181 (40%), Gaps = 40/181 (22%)
Query: 384 TDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNED-----FR---------- 427
+D + ++G G V+ AR L+D + A+KV + + FR
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 428 --ALVLEYTTNGSLEKVLYSSNYIL----------DILQRLNIMID------VTSALEYL 469
A+V Y T G E YI+ DI+ M + A + L
Sbjct: 71 HPAIVAVYDT-GEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMA 526
+F + IIH D+KP N L+ + DFGIA+ + D + QT A+IG Y++
Sbjct: 130 NFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIA--DSGNSVXQTAAVIGTAQYLS 187
Query: 527 P 527
P
Sbjct: 188 P 188
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 37/174 (21%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGMEFAIK-------------------------VFHFSC 421
F +++G G+ G++ + D + A+K V + C
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFC 85
Query: 422 SNED--FRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
+ +D F+ + +E +L++ + ++ L+ + ++ TS L +LH S I+H
Sbjct: 86 TEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVH 141
Query: 480 CDLKPHNKLL-----DDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
DLKPHN L+ I A +SDFG+ KL G ++ G++AP
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAP 195
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+V+EY + ++ D +R + A+EY H I+H DLKP N
Sbjct: 85 VMVIEYAGGELFDYIVEKKRMTEDEGRRF--FQQIICAIEYCH---RHKIVHRDLKPENL 139
Query: 488 LLDDNIVAHLSDFGIAKLLT 507
LLDDN+ ++DFG++ ++T
Sbjct: 140 LLDDNLNVKIADFGLSNIMT 159
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 70/184 (38%), Gaps = 49/184 (26%)
Query: 387 FSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF--SCSNEDFRALV------------- 430
F LIG G FG V+KA+ + DG + IK + + + +AL
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 431 --------------------------LEYTTNGSLEK-VLYSSNYILDILQRLNIMIDVT 463
+E+ G+LE+ + LD + L + +T
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQIT 132
Query: 464 SALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG 523
++Y+H S +I+ DLKP N L D + DFG+ L + + TL
Sbjct: 133 KGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLR--- 186
Query: 524 YMAP 527
YM+P
Sbjct: 187 YMSP 190
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
LV E+ +G L L + + L + +DV + YL +IH DL N
Sbjct: 79 CLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNC 135
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L+ +N V +SDFG+ + + +DQ + T T + + +P
Sbjct: 136 LVGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASP 174
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E +++E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 79 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 135
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP 182
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 37/165 (22%)
Query: 369 QASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFSCSNED--- 425
+AS+ QE + LIG+G FG VY R E AI++ NED
Sbjct: 17 KASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLK 74
Query: 426 -FRALVLEYTTN---------------------------GSLEKVLYSSNYILDILQRLN 457
F+ V+ Y +L V+ + +LD+ +
Sbjct: 75 AFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQ 134
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGI 502
I ++ + YLH + I+H DLK N D+ V ++DFG+
Sbjct: 135 IAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 55/186 (29%)
Query: 390 NNLIGRGSFGSVYKARLQ-DG--MEFAIKVFHFSCSNEDFR------------------- 427
++IG G+FG V KAR++ DG M+ AIK S +D R
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 428 ------------ALVLEYTTNGSLEKVLYSSNYI---------------LDILQRLNIMI 460
L +EY +G+L L S + L Q L+
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 461 DVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
DV ++YL IH +L N L+ +N VA ++DFG+++ G++ + +T
Sbjct: 147 DVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSR---GQEVYVKKTMGRL 200
Query: 521 IIGYMA 526
+ +MA
Sbjct: 201 PVRWMA 206
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 34/164 (20%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFH---------------------------FSCSNED 425
+G+G FG V+ AIK ++ +E+
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 75
Query: 426 FRALVLEYTTNGSLEKVLY-SSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKP 484
+V EY + GSL L + L + Q +++ + S + Y+ +H DL+
Sbjct: 76 PIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA 132
Query: 485 HNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 133 ANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP 174
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 431 LEYTTNGSLEK-VLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL 489
+E+ G+LE+ + LD + L + +T ++Y+H S +IH DLKP N L
Sbjct: 113 MEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFL 169
Query: 490 DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
D + DFG+ L + + +T++ + YM+P
Sbjct: 170 VDTKQVKIGDFGLVTSLKNDGK---RTRSKGTLRYMSP 204
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V+EY + GSL L L + Q +++ + S + Y+
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEXTARQGAKFPIKWTAP 184
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V+EY + GSL L L + Q +++ + S + Y+
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E +++E+ T G+L L N + + L + ++SA+EYL IH
Sbjct: 76 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP 179
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 66/152 (43%), Gaps = 44/152 (28%)
Query: 393 IGRGSFGSVYKARLQD-GMEFAIKVF------------------------HFSCSN--ED 425
IG GS+G V+K R +D G AIK F H + N E
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 426 FR-----ALVLEYTTNGSLEKVLYSSNYILDILQR---LNIMIDVT-SALEYLHFGYSTP 476
FR LV EY + L + LD QR +++ +T L+ ++F +
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHE--------LDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508
IH D+KP N L+ + V L DFG A+LLTG
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTG 154
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLY-SSNYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V EY + GSL L + L + Q +++ + S + Y+
Sbjct: 328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 384
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 433
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYI-LDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E +++E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 83 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 186
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 38/158 (24%)
Query: 378 QELLRATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKV-------------------- 416
+E+ D F +IGRG+F V ++ Q G +A+K+
Sbjct: 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERD 113
Query: 417 ------------FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTS 464
HF+ +E++ LV+EY G L +L + + ++
Sbjct: 114 VLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVM 173
Query: 465 ALEYLH-FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
A++ +H GY +H D+KP N LLD L+DFG
Sbjct: 174 AIDSVHRLGY----VHRDIKPDNILLDRCGHIRLADFG 207
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 423 NEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
NED +V E G + +V D Q D+ +EYLH+ IIH D+
Sbjct: 109 NEDHLYMVFELVNQGPVMEVPTLKPLSED--QARFYFQDLIKGIEYLHY---QKIIHRDI 163
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
KP N L+ ++ ++DFG++ G D + + T+ +MAP
Sbjct: 164 KPSNLLVGEDGHIKIADFGVSNEFKGSDALL--SNTVGTPAFMAP 206
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 34/164 (20%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFH---------------------------FSCSNED 425
+G+G FG V+ AIK ++ +E+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 426 FRALVLEYTTNGSLEKVLY-SSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKP 484
+V EY + GSL L + L + Q +++ + S + Y+ +H DL+
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA 308
Query: 485 HNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 309 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 350
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 34/164 (20%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFH---------------------------FSCSNED 425
+G+G FG V+ AIK ++ +E+
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 251
Query: 426 FRALVLEYTTNGSLEKVLY-SSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKP 484
+V EY + GSL L + L + Q +++ + S + Y+ +H DL+
Sbjct: 252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA 308
Query: 485 HNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 309 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 350
>pdb|4FCG|A Chain A, Structure Of The Leucine-Rich Repeat Domain Of The Type
Iii Effector Xcv3220 (Xopl)
Length = 328
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 93 LKKLDISRNPLDGFLPRVVGNFSQ--------SLEFIWMSDCNISGGISEEIGNLTDLIS 144
L+ L ++RNPL LP + + ++ E + + S S E L +L S
Sbjct: 129 LETLTLARNPLRA-LPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQS 187
Query: 145 IDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSI 204
+ L + S+ ++ LQ L+ L R + L P + HL L +LDLRG +
Sbjct: 188 LRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGP-AIHHLPKLEELDLRGCTALRNY 245
Query: 205 PTCFGNLTALRNLHL-DSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKV 260
P FG L+ L L D + L ++P + L + LD + + LPS I L
Sbjct: 246 PPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPA 302
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLY-SSNYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V EY + GSL L + L + Q +++ + S + Y+
Sbjct: 72 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 128
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 177
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYI-LDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E +++E+ T G+L L N + + L + ++SA+EYL IH
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 128 ISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHL 187
+ G+ +++ NL +L+ ++ N+L KL L +L+ N+L+ V L
Sbjct: 100 LPNGVFDKLTNLKELVLVE---NQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKL 156
Query: 188 AVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
L +LDL N+L F LT L++L L N+L S+P
Sbjct: 157 TNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP 197
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 78/159 (49%), Gaps = 11/159 (6%)
Query: 147 LGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPN-VLCHLAVLFQLDLRGNKLSGSIP 205
LGGNKL+ IS L +L L +L GN+L+ S+PN V L L +L L N+L
Sbjct: 70 LGGNKLH-DIS-ALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPD 126
Query: 206 TCFGNLTALRNLHLDSNELTSIPSILWN-LKDILYLDFWSNLFVGPLPSKIGNLKVLTRI 264
F LT L L+L N+L S+P +++ L ++ LD N LP G LT++
Sbjct: 127 GVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPE--GVFDKLTQL 183
Query: 265 DFSR--NNLLGDIPTTI-QGLKSLQFLSLGHNRLQGSIP 300
R N L +P + L SLQ++ L N + P
Sbjct: 184 KDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 134 EEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQL 193
+E+ NLT LI L GN+L + KL L+ L N+L+ V L L L
Sbjct: 82 KELTNLTYLI---LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYL 138
Query: 194 DLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229
+L N+L F LT L L L N+L S+P
Sbjct: 139 NLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPE 174
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E +++E+ T G+L L N + + L + ++SA+EYL IH
Sbjct: 78 CTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP 186
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 5/95 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
++ E+ NGSL+ L ++ ++Q + ++ + + ++YL +H L N L
Sbjct: 85 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRALAARNIL 141
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG 523
++ N+V +SDFG+++ L ED + T T A+ G
Sbjct: 142 VNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGG 174
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V EY + GSL L L + Q +++ + S + Y+
Sbjct: 79 YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 79 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 135
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
DL N L+ +N + ++DFG+++L+TG+
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSRLMTGD 165
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 34/164 (20%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFH---------------------------FSCSNED 425
+G+G FG V+ AIK ++ +E+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 426 FRALVLEYTTNGSLEKVLY-SSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKP 484
+V EY GSL L + L + Q +++ + S + Y+ +H DL+
Sbjct: 83 PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRA 139
Query: 485 HNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 140 ANILVGENLVCKVADFGLARLI--EDNEWTARQGAKFPIKWTAP 181
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V EY + GSL L L + Q +++ + S + Y+
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 91 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 147
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 194
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 43/168 (25%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCS-------NE-------------------- 424
IG+G+ G+VY A + G E AI+ + NE
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 425 --DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
D +V+EY GSL V+ + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
K N LL + L+DFG +T E Q++ ++G +MAP
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSTMVGTPYWMAP 185
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 75/181 (41%), Gaps = 50/181 (27%)
Query: 384 TDGFSANNLIGRGSFGSVYKARLQDGME--FAIKVFHFSCSNEDFR-------------- 427
+D F + +GRG+ VY+ + Q G + +A+KV + + R
Sbjct: 52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 428 -------------ALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSALEYL 469
+LVLE T G L EK YS D +++ + A+ YL
Sbjct: 111 IKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ------ILEAVAYL 164
Query: 470 HFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMA 526
H I+H DLKP N L + ++DFG++K++ E Q + +T GY A
Sbjct: 165 H---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKT-VCGTPGYCA 218
Query: 527 P 527
P
Sbjct: 219 P 219
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V EY + GSL L L + Q +++ + S + Y+
Sbjct: 70 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 126
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 175
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 403 KARLQDGMEFAIKV-FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ R+Q + F V FS + +VLEY G + L + R
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARF-YAAQ 150
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
+ EYLH S +I+ DLKP N L+D ++DFG AK + G + T
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE--- 204
Query: 522 IGYMAP 527
Y+AP
Sbjct: 205 --YLAP 208
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 412 FAIKVFHFSCSNEDFRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSAL 466
F +K+ H++ E L+L++ G L ++V+++ + L L + AL
Sbjct: 87 FIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL------AL 139
Query: 467 EYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMA 526
++LH S II+ DLKP N LLD+ L+DFG++K D + YMA
Sbjct: 140 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMA 194
Query: 527 P 527
P
Sbjct: 195 P 195
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V EY + GSL L L + Q +++ + S + Y+
Sbjct: 68 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 124
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 173
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V EY + GSL L L + Q +++ + S + Y+
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N + + L + ++SA+EYL IH
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTXTAHAGAKFPIKWTAP 179
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 69/165 (41%), Gaps = 37/165 (22%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCS-------NE-------------------- 424
IG+G+ G+VY A + G E AI+ + NE
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 425 --DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
D +V+EY GSL V+ + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
K N LL + L+DFG +T E +++ + +MAP
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAP 185
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 186
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 82 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 138
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 185
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 412 FAIKVFHFSCSNEDFRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSAL 466
F +K+ H++ E L+L++ G L ++V+++ + L L + AL
Sbjct: 88 FIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL------AL 140
Query: 467 EYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMA 526
++LH S II+ DLKP N LLD+ L+DFG++K D + YMA
Sbjct: 141 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMA 195
Query: 527 P 527
P
Sbjct: 196 P 196
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 42/174 (24%)
Query: 387 FSANNLIGRGSFGSVYKA---RLQDGMEFAIKV--------------------------- 416
F+ IG+GSFG V+K R Q + AIK+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVV--AIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 417 ---FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ S + +++EY GS +L LD Q I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 121
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IH D+K N LL ++ L+DFG+A LT D + + + +MAP
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 173
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 183
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 43/168 (25%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCS-------NE-------------------- 424
IG+G+ G+VY A + G E AI+ + NE
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 425 --DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
D +V+EY GSL V+ + +D Q + + ALE+LH S +IH D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 142
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
K N LL + L+DFG +T E Q++ ++G +MAP
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSXMVGTPYWMAP 185
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 42/174 (24%)
Query: 387 FSANNLIGRGSFGSVYKA---RLQDGMEFAIKV--------------------------- 416
F+ IG+GSFG V+K R Q + AIK+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVV--AIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 417 ---FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ S + +++EY GS +L LD Q I+ ++ L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 121
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IH D+K N LL ++ L+DFG+A LT D + + + +MAP
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP 173
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
DL N L+ +N + ++DFG+++L+TG+
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTGD 166
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
DL N L+ +N + ++DFG+++L+TG+
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTGD 169
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLY-SSNYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V EY + GSL L + L + Q +++ + S + Y+
Sbjct: 245 YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 301
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 350
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 80 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 136
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 183
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 42/174 (24%)
Query: 387 FSANNLIGRGSFGSVYKA---RLQDGMEFAIKV--------------------------- 416
F+ IG+GSFG V+K R Q + AIK+
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVV--AIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 417 ---FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ S + +++EY GS +L LD Q I+ ++ L+YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 136
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IH D+K N LL ++ L+DFG+A LT D + + + +MAP
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 188
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 42/174 (24%)
Query: 387 FSANNLIGRGSFGSVYKA---RLQDGMEFAIKV--------------------------- 416
F+ IG+GSFG V+K R Q + AIK+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVV--AIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 417 ---FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ S + +++EY GS +L LD Q I+ ++ L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP--LDETQIATILREILKGLDYLH--- 141
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IH D+K N LL ++ L+DFG+A LT D + + + +MAP
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP 193
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 7/99 (7%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++EY GS +L + + D Q ++ ++ L+YLH S IH D+K N L
Sbjct: 98 IIMEYLGGGSALDLLRAGPF--DEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVL 152
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L + L+DFG+A LT D + + + +MAP
Sbjct: 153 LSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAP 189
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 43/168 (25%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCS-------NE-------------------- 424
IG+G+ G+VY A + G E AI+ + NE
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 425 --DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
D +V+EY GSL V+ + +D Q + + ALE+LH S +IH D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDI 143
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
K N LL + L+DFG +T E Q++ ++G +MAP
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSXMVGTPYWMAP 186
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V+EY + G L L L + Q +++ + S + Y+
Sbjct: 79 YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 34/164 (20%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFH---------------------------FSCSNED 425
+G+G FG V+ AIK ++ +E+
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 82
Query: 426 FRALVLEYTTNGSLEKVLY-SSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKP 484
+V EY GSL L + L + Q +++ + S + Y+ +H DL+
Sbjct: 83 PIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE---RMNYVHRDLRA 139
Query: 485 HNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 140 ANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 181
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N + + L + ++SA+EYL IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 45/103 (43%)
Query: 126 CNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLC 185
CN G S G + ++L NKL KL +L LS N+++ V
Sbjct: 14 CNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFD 73
Query: 186 HLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
L L L L NKL F LT L+ L LD+N+L S+P
Sbjct: 74 KLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVP 116
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 47/109 (43%), Gaps = 10/109 (9%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPN-VLCHLAVLFQLDLRG 197
LT L + L N++ KL KL L N+L+ S+PN V L L +L L
Sbjct: 51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQ-SLPNGVFDKLTQLKELALDT 109
Query: 198 NKLSGSIPTCFGNLTALRNLHLDSNEL-TSIPSILWNLKDILYLDFWSN 245
N+L F LT+L+ + L +N S P I YL W N
Sbjct: 110 NQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR-------IDYLSRWLN 151
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N + + L + ++SA+EYL IH
Sbjct: 76 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 132
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
DL N L+ +N + ++DFG+++L+TG+
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSRLMTGD 162
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY + G L + N LD + + + S ++Y H ++H DLKP N L
Sbjct: 93 MVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVL 148
Query: 489 LDDNIVAHLSDFGIAKLLT 507
LD ++ A ++DFG++ +++
Sbjct: 149 LDAHMNAKIADFGLSNMMS 167
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 412 FAIKVFHFSCSNEDFRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSAL 466
F +K+ H++ E L+L++ G L ++V+++ + L L + AL
Sbjct: 87 FIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL------AL 139
Query: 467 EYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMA 526
++LH S II+ DLKP N LLD+ L+DFG++K D + YMA
Sbjct: 140 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--ESIDHEKKAYSFCGTVEYMA 194
Query: 527 P 527
P
Sbjct: 195 P 195
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N + + L + ++SA+EYL IH
Sbjct: 83 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 139
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 186
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N + + L + ++SA+EYL IH
Sbjct: 78 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 134
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DL N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 181
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY N + ++ +R + SA+EY H I+H DLKP N L
Sbjct: 90 MVIEYAGNELFDYIVQRDKMSEQEARRF--FQQIISAVEYCH---RHKIVHRDLKPENLL 144
Query: 489 LDDNIVAHLSDFGIAKLLT 507
LD+++ ++DFG++ ++T
Sbjct: 145 LDEHLNVKIADFGLSNIMT 163
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 5/79 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY N + ++ +R + SA+EY H I+H DLKP N L
Sbjct: 91 MVIEYAGNELFDYIVQRDKMSEQEARRF--FQQIISAVEYCH---RHKIVHRDLKPENLL 145
Query: 489 LDDNIVAHLSDFGIAKLLT 507
LD+++ ++DFG++ ++T
Sbjct: 146 LDEHLNVKIADFGLSNIMT 164
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY +G L L LD + L + +EYL S +H DL N L
Sbjct: 87 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 143
Query: 489 LDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
++ ++DFG+AKLL +D + + + I + AP
Sbjct: 144 VESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAP 183
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 422 SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCD 481
++D +V+EY N + ++ +R + SA+EY H I+H D
Sbjct: 78 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF--FQQIISAVEYCH---RHKIVHRD 132
Query: 482 LKPHNKLLDDNIVAHLSDFGIAKLLT 507
LKP N LLD+++ ++DFG++ ++T
Sbjct: 133 LKPENLLLDEHLNVKIADFGLSNIMT 158
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 422 SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCD 481
++D +V+EY N + ++ +R + SA+EY H I+H D
Sbjct: 74 KSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRF--FQQIISAVEYCH---RHKIVHRD 128
Query: 482 LKPHNKLLDDNIVAHLSDFGIAKLLT 507
LKP N LLD+++ ++DFG++ ++T
Sbjct: 129 LKPENLLLDEHLNVKIADFGLSNIMT 154
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYI-LDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E +V EY G+L L N + + L + ++SA+EYL IH
Sbjct: 97 CTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIH 153
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
DL N L+ +N V ++DFG+++L+TG+
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSRLMTGD 183
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA- 520
+ S LE+LH II+ DLKP N LLDD+ +SD G+A L T+T+ A
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---GQTKTKGYAG 351
Query: 521 IIGYMAP 527
G+MAP
Sbjct: 352 TPGFMAP 358
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA- 520
+ S LE+LH II+ DLKP N LLDD+ +SD G+A L T+T+ A
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---GQTKTKGYAG 351
Query: 521 IIGYMAP 527
G+MAP
Sbjct: 352 TPGFMAP 358
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA- 520
+ S LE+LH II+ DLKP N LLDD+ +SD G+A L T+T+ A
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---GQTKTKGYAG 351
Query: 521 IIGYMAP 527
G+MAP
Sbjct: 352 TPGFMAP 358
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 41/152 (26%)
Query: 393 IGRGSFGSVYKARL------------------------QDGMEFAIKVFHFSCSNE---- 424
IG+G FG V+K RL + EF +VF S N
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 425 -------DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
+ +V+E+ G L L + + +L +M+D+ +EY+ + PI
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPI 145
Query: 478 IHCDLKPHN---KLLDDN--IVAHLSDFGIAK 504
+H DL+ N + LD+N + A ++DFG+++
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 7/67 (10%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA- 520
+ S LE+LH II+ DLKP N LLDD+ +SD G+A L T+T+ A
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA---GQTKTKGYAG 351
Query: 521 IIGYMAP 527
G+MAP
Sbjct: 352 TPGFMAP 358
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 429 LVLEYTTNGSLEKVLYS---SNYILDILQRLNIMIDVTSALEYLHF----GYSTPIIHCD 481
+V+EY G L V+ LD L +M +T AL+ H G++ ++H D
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT--VLHRD 141
Query: 482 LKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LKP N LD L DFG+A++L D S +T + YM+P
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILN-HDTSFAKT-FVGTPYYMSP 185
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 64/166 (38%), Gaps = 45/166 (27%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIK------------------------ 415
LR F ++G+G+FG V KAR D +AIK
Sbjct: 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNH 61
Query: 416 --VFHFSCSNEDFRALV---------------LEYTTNGSLEKVLYSSNYILDILQRLNI 458
V + + + R V EY N +L +++S N + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
+ AL Y+H S IIH +LKP N +D++ + DFG+AK
Sbjct: 122 FRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 429 LVLEYTTNGSLEKVLYSSNYIL---DILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPH 485
+V EY GSL L S + D L L +DV A+EYL +H DL
Sbjct: 92 IVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLE---GNNFVHRDLAAR 146
Query: 486 NKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
N L+ ++ VA +SDFG+ K + S TQ + + AP
Sbjct: 147 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 183
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 39/216 (18%)
Query: 42 NLSTLKVFDVDNNYVLGRLSSI----------VDELSLSDNYLTSSTPELSFLSSMSNCK 91
NL+TL++FD RL++I + EL L +N + S P +F +
Sbjct: 113 NLNTLELFD-------NRLTTIPNGAFVYLSKLKELWLRNNPI-ESIPSYAF----NRIP 160
Query: 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLI---SIDLG 148
L++LD+ ++ +L ++ ++ CN+ EI NLT LI +DL
Sbjct: 161 SLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNL-----REIPNLTPLIKLDELDLS 215
Query: 149 GNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCF 208
GN L+ + L LQ L ++++ N +L L +++L N L+ F
Sbjct: 216 GNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLF 275
Query: 209 GNLTALRNLHLDSNELTSIPSILWNLK-DILYLDFW 243
L L +HL N WN DIL+L +W
Sbjct: 276 TPLHHLERIHLHHNP--------WNCNCDILWLSWW 303
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 72/167 (43%), Gaps = 31/167 (18%)
Query: 135 EIG---NLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPN-VLCHLAVL 190
EIG L +L +++L N+L + L KL+ L R N +E SIP+ + L
Sbjct: 104 EIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSL 162
Query: 191 FQLDL-RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVG 249
+LDL +LS F L+ LR L+L L IP NL ++ LD
Sbjct: 163 RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREIP----NLTPLIKLD-------- 210
Query: 250 PLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQ 296
+D S N+L P + QGL LQ L + +++Q
Sbjct: 211 -------------ELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQ 244
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V EY + GSL L L + Q +++ + S + Y+
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 43/186 (23%)
Query: 378 QELLRATDGFSANNLIGRGSFGSVYKARLQDGME-FAIKVF------------------- 417
+E+ + F +IGRG+FG V ++++ +A+K+
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 418 -------------HFSCSNEDFRALVLEYTTNGSLEKVLYS-SNYILDILQRLNI--MID 461
H++ +E+ LV++Y G L +L + + + + R I M+
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 186
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
++ LH+ +H D+KP N LLD N L+DFG + L +D ++ + +
Sbjct: 187 AIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGT 239
Query: 522 IGYMAP 527
Y++P
Sbjct: 240 PDYISP 245
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 429 LVLEYTTNGSLEKVLYS---SNYILDILQRLNIMIDVTSALEYLHF----GYSTPIIHCD 481
+V+EY G L V+ LD L +M +T AL+ H G++ ++H D
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT--VLHRD 141
Query: 482 LKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
LKP N LD L DFG+A++L D S + A +G YM+P
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILN-HDTSFAK----AFVGTPYYMSP 185
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 18/126 (14%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDIL---------------QRLNIMID 461
F+ C + D +V EY +G L K L + IL Q L+I
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
+ S + YL S +H DL N L+ N++ + DFG+++ + D T+
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 522 IGYMAP 527
I +M P
Sbjct: 199 IRWMPP 204
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 43/186 (23%)
Query: 378 QELLRATDGFSANNLIGRGSFGSVYKARLQDGME-FAIKVF------------------- 417
+E+ + F +IGRG+FG V ++++ +A+K+
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 418 -------------HFSCSNEDFRALVLEYTTNGSLEKVLYS-SNYILDILQRLNI--MID 461
H++ +E+ LV++Y G L +L + + + + R I M+
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
++ LH+ +H D+KP N LLD N L+DFG + L +D ++ + +
Sbjct: 203 AIDSIHQLHY------VHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGT 255
Query: 522 IGYMAP 527
Y++P
Sbjct: 256 PDYISP 261
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 34/164 (20%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFH---------------------------FSCSNED 425
+G+G FG V+ AIK ++ +E+
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 426 FRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKP 484
+V EY + GSL L L + Q +++ + S + Y+ +H DL+
Sbjct: 253 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRA 309
Query: 485 HNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
N L+ +N+V ++DFG+ +L+ ED T Q I + AP
Sbjct: 310 ANILVGENLVCKVADFGLGRLI--EDNEYTARQGAKFPIKWTAP 351
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 429 LVLEYTTNGSLEKVLYSSNYIL---DILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPH 485
+V EY GSL L S + D L L +DV A+EYL +H DL
Sbjct: 83 IVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLE---GNNFVHRDLAAR 137
Query: 486 NKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
N L+ ++ VA +SDFG+ K + S TQ + + AP
Sbjct: 138 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 174
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 412 FAIKVFHFSCSNEDFRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSAL 466
F +K+ H++ E L+L++ G L ++V+++ + L L + L
Sbjct: 91 FVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL------GL 143
Query: 467 EYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMA 526
++LH S II+ DLKP N LLD+ L+DFG++K D + YMA
Sbjct: 144 DHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--EAIDHEKKAYSFCGTVEYMA 198
Query: 527 P 527
P
Sbjct: 199 P 199
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 429 LVLEYTTNGSLEKVLYSSNYIL---DILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPH 485
+V EY GSL L S + D L L +DV A+EYL +H DL
Sbjct: 77 IVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLE---GNNFVHRDLAAR 131
Query: 486 NKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
N L+ ++ VA +SDFG+ K + S TQ + + AP
Sbjct: 132 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 168
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 39/172 (22%)
Query: 367 QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGME-FAIKVF-------- 417
+P+ ++ R S Q L+ D F + ++G+GSFG V+ A + + FAIK
Sbjct: 1 EPELNKERPSLQIKLKIED-FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMD 59
Query: 418 -----------------------HFSCSNEDFRAL--VLEYTTNGSLEKVLYSSNYILDI 452
H C+ + L V+EY G L + S + D+
Sbjct: 60 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDL 118
Query: 453 LQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
+ ++ L++LH S I++ DLK N LLD + ++DFG+ K
Sbjct: 119 SRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 167
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 41/184 (22%)
Query: 378 QELLRATDGFSANNLIGRGSFGSV-----------YKARL------------------QD 408
++L + + +IGRG+FG V Y +L +D
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 409 GMEFA-----IKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVT 463
M FA +++F ++ ++ + +V+EY G L ++ SNY + +V
Sbjct: 127 IMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVV 183
Query: 464 SALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG 523
AL+ +H S IH D+KP N LLD + L+DFG + E T +
Sbjct: 184 LALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPD 239
Query: 524 YMAP 527
Y++P
Sbjct: 240 YISP 243
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
LE +H + I+H DLKP N L+ D ++ L DFGIA + + S+ + + + YM
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 526 AP 527
P
Sbjct: 177 PP 178
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 194
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 228
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMI-DVTSALEYLHFGYST 475
H++ E L+L+Y G L L + + I + ++ ALE+LH
Sbjct: 124 LHYAFQTETKLHLILDYINGGELFTHLSQRERFTE--HEVQIYVGEIVLALEHLH---KL 178
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
II+ D+K N LLD N L+DFG++K D++ I YMAP
Sbjct: 179 GIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-DETERAYDFCGTIEYMAP 229
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
LE +H + I+H DLKP N L+ D ++ L DFGIA + + S+ + + + YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 526 AP 527
P
Sbjct: 224 PP 225
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 435 TNGSLEKVLYSSN--YIL--DILQRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N Y++ + Q L +D ++ L+ L F +S
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 171
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
LE +H + I+H DLKP N L+ D ++ L DFGIA + + S+ + + + YM
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 526 AP 527
P
Sbjct: 176 PP 177
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 41/184 (22%)
Query: 378 QELLRATDGFSANNLIGRGSFGSV-----------YKARL------------------QD 408
++L + + +IGRG+FG V Y +L +D
Sbjct: 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 121
Query: 409 GMEFA-----IKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVT 463
M FA +++F ++ ++ + +V+EY G L ++ SNY + +V
Sbjct: 122 IMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVV 178
Query: 464 SALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG 523
AL+ +H S IH D+KP N LLD + L+DFG + E T +
Sbjct: 179 LALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPD 234
Query: 524 YMAP 527
Y++P
Sbjct: 235 YISP 238
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 41/184 (22%)
Query: 378 QELLRATDGFSANNLIGRGSFGSV-----------YKARL------------------QD 408
++L + + +IGRG+FG V Y +L +D
Sbjct: 67 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERD 126
Query: 409 GMEFA-----IKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVT 463
M FA +++F ++ ++ + +V+EY G L ++ SNY + +V
Sbjct: 127 IMAFANSPWVVQLF-YAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFYTAEVV 183
Query: 464 SALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG 523
AL+ +H S IH D+KP N LLD + L+DFG + E T +
Sbjct: 184 LALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDT-AVGTPD 239
Query: 524 YMAP 527
Y++P
Sbjct: 240 YISP 243
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 138 NLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNEL-EGSIPNVLCHLAVLFQLDLR 196
+L +LI +D+ + + L L+ L GN E +P++ L L LDL
Sbjct: 419 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 478
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
+L PT F +L++L+ L++ SN+L S+P
Sbjct: 479 QCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 74 LTSSTPELSFLSSMSNCKY-LKKLDISRNPLDGFLPRVVGNFS----QSLEFIWMSDCNI 128
+T EL+F N + K LD+S NPL R +G++S L+ + +S C I
Sbjct: 10 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPL-----RHLGSYSFFSFPELQVLDLSRCEI 64
Query: 129 SGGISEEIGNLTDLISIDLGGNKLN----GSISITLGKLQKLQFLSFRGNELEGSIPNVL 184
+L+ L ++ L GN + G+ S L LQKL + LE + P +
Sbjct: 65 QTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVAVETNLASLE-NFP--I 120
Query: 185 CHLAVLFQLDLRGNKL-SGSIPTCFGNLTALRNLHLDSNELTSI 227
HL L +L++ N + S +P F NLT L +L L SN++ SI
Sbjct: 121 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 27/188 (14%)
Query: 117 SLEFIWMSDCNIS--GGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGN 174
SLEF+ +S +S G S+ T L +DL N + S LG L++L+ L F+ +
Sbjct: 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHS 406
Query: 175 ELEG-SIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
L+ S +V L L LD+ + F L++L L + N
Sbjct: 407 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN----------- 455
Query: 234 LKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHN 293
F N LP L+ LT +D S+ L PT L SLQ L++ N
Sbjct: 456 -------SFQENF----LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504
Query: 294 RLQGSIPN 301
+L+ S+P+
Sbjct: 505 QLK-SVPD 511
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYI-LDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 324 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 380
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+L N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 427
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 59/150 (39%), Gaps = 37/150 (24%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ------------------DGMEFAIK-----VFHFSC 421
D F +G+G FG+VY AR + +G+E ++ H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 422 SN--------EDFRA--LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
N D R L+LEY G L K L S D + IM ++ AL Y H
Sbjct: 83 PNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC-TFDEQRTATIMEELADALMYCH- 140
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
+IH D+KP N LL ++DFG
Sbjct: 141 --GKKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
LE +H + I+H DLKP N L+ D ++ L DFGIA + + S+ + + + YM
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 526 AP 527
P
Sbjct: 180 PP 181
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYI-LDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N ++ + L + ++SA+EYL IH
Sbjct: 282 CTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIH 338
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+L N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 385
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
LE +H + I+H DLKP N L+ D ++ L DFGIA + + S+ + + + YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 526 AP 527
P
Sbjct: 224 PP 225
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFAEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
LE +H + I+H DLKP N L+ D ++ L DFGIA + + S+ + + + YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 526 AP 527
P
Sbjct: 196 PP 197
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 105 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 160
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D+ ++DFG AK + G + T Y+AP
Sbjct: 161 IDEQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 194
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 46/175 (26%)
Query: 393 IGRGSFGSVYKARL------------------------QDGMEFAIKVFHFSCSNE---- 424
IG+G FG V+K RL + EF +VF S N
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 425 -------DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
+ +V+E+ G L L + + +L +M+D+ +EY+ + PI
Sbjct: 87 KLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ-NQNPPI 145
Query: 478 IHCDLKPHN---KLLDDN--IVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+H DL+ N + LD+N + A ++DFG T + + + L +MAP
Sbjct: 146 VHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSGLLGNFQWMAP 195
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 30/175 (17%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKARLQD-GMEFAIKVFHFSCSNEDFRAL------VLEY 433
++ + + L+G GS+G V K R +D G AIK F S ++ + + +L+
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 434 TTNGSLEKVL--------------YSSNYILDILQRLNIMIDVTSALEYLH-------FG 472
+ +L +L + + ILD L+ +D +YL F
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 473 YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+S IIH D+KP N L+ + V L DFG A+ L + +A Y AP
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAP 193
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
LE +H + I+H DLKP N L+ D ++ L DFGIA + + S+ + + + YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 526 AP 527
P
Sbjct: 224 PP 225
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 44/177 (24%)
Query: 387 FSANNLIGRGSFGSVYKARLQD-GMEFAIKVFH--------------------------- 418
FS + +IGRG FG VY R D G +A+K
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 419 --------FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH 470
++ D + +L+ G L L + R ++ LE++H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH 309
Query: 471 FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ +++ DLKP N LLD++ +SD G+A + + ++ GYMAP
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 359
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY + G + L + + + R + SA++Y H Y I+H DLK N L
Sbjct: 91 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKY---IVHRDLKAENLL 146
Query: 489 LDDNIVAHLSDFGIAKLLT 507
LD ++ ++DFG + T
Sbjct: 147 LDGDMNIKIADFGFSNEFT 165
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLAGTPE-----YLAP 207
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 429 LVLEYTTNGSLEKVLYSSNYIL---DILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPH 485
+V EY GSL L S + D L L +DV A+EYL +H DL
Sbjct: 264 IVTEYMAKGSLVDYLRSRGRSVLGGDCL--LKFSLDVCEAMEYLE---GNNFVHRDLAAR 318
Query: 486 NKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
N L+ ++ VA +SDFG+ K + S TQ + + AP
Sbjct: 319 NVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAP 355
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 419 FSCSNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPI 477
++ +E+ +V EY + G L L L + Q +++ + S + Y+
Sbjct: 79 YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 135
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+H DL+ N L+ +N+V ++DFG+A+L+ ED T Q I + AP
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI--EDNEYTARQGAKFPIKWTAP 184
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 44/177 (24%)
Query: 387 FSANNLIGRGSFGSVYKARLQD-GMEFAIKVFH--------------------------- 418
FS + +IGRG FG VY R D G +A+K
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 249
Query: 419 --------FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH 470
++ D + +L+ G L L + R ++ LE++H
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH 308
Query: 471 FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ +++ DLKP N LLD++ +SD G+A + + ++ GYMAP
Sbjct: 309 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 358
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 44/177 (24%)
Query: 387 FSANNLIGRGSFGSVYKARLQD-GMEFAIKVFH--------------------------- 418
FS + +IGRG FG VY R D G +A+K
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 419 --------FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH 470
++ D + +L+ G L L + R ++ LE++H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH 309
Query: 471 FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ +++ DLKP N LLD++ +SD G+A + + ++ GYMAP
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 359
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 67/177 (37%), Gaps = 44/177 (24%)
Query: 387 FSANNLIGRGSFGSVYKARLQD-GMEFAIKVFH--------------------------- 418
FS + +IGRG FG VY R D G +A+K
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250
Query: 419 --------FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH 470
++ D + +L+ G L L + R ++ LE++H
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF-YAAEIILGLEHMH 309
Query: 471 FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ +++ DLKP N LLD++ +SD G+A + + ++ GYMAP
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHA----SVGTHGYMAP 359
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 113 MVMEYVAGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 168
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 169 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 202
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 62/164 (37%), Gaps = 39/164 (23%)
Query: 384 TDGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKV-------------------------- 416
TD + IG+G+F V + +L G E+A K+
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 417 -----FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
H S S E F LV + T G L + + + Y + I + + L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 472 GYSTPIIHCDLKPHNKLLDDNI---VAHLSDFGIAKLLTGEDQS 512
G ++H DLKP N LL L+DFG+A + G+ Q+
Sbjct: 123 G----VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQA 162
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 34/193 (17%)
Query: 364 SNMQPQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVF-HFSCS 422
S+MQ Q ++ + E + +G G FG V+ + A+K S S
Sbjct: 2 SHMQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMS 61
Query: 423 NEDFRA--------------------------LVLEYTTNGSLEKVLYSSNYILDILQRL 456
+ F A ++ EY NGSL L + + I +
Sbjct: 62 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPS---GIKLTI 118
Query: 457 NIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515
N ++D+ + + E + F IH DL+ N L+ D + ++DFG+A+L+ ED T
Sbjct: 119 NKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI--EDNEYTA 176
Query: 516 TQTLAI-IGYMAP 527
+ I + AP
Sbjct: 177 REGAKFPIKWTAP 189
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 139 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 194
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G ++ T Y+AP
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGATWTLCGTPE-----YLAP 228
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY +G L L LD + L + +EYL S +H DL N L
Sbjct: 91 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 147
Query: 489 LDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
++ ++DFG+AKLL +D + + + I + AP
Sbjct: 148 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 187
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY +G L L LD + L + +EYL S +H DL N L
Sbjct: 90 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 146
Query: 489 LDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
++ ++DFG+AKLL +D + + + I + AP
Sbjct: 147 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 186
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 64/176 (36%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 144
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G ++ T Y+AP
Sbjct: 145 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE-----YLAP 193
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F IG GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 64/176 (36%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G ++ T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE-----YLAP 208
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY +G L L LD + L + +EYL S +H DL N L
Sbjct: 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNIL 159
Query: 489 LDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
++ ++DFG+AKLL +D + + + I + AP
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAP 199
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 39/164 (23%)
Query: 384 TDGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKV-------------------------- 416
TD + +G+G+F V + ++ G E+A K+
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 417 -----FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
H S S E F LV + T G L + + + Y + + + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILESVNH 118
Query: 472 GYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQS 512
+ I+H DLKP N LL L+DFG+A + G+ Q+
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA 162
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 39/164 (23%)
Query: 384 TDGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKV-------------------------- 416
TD + +G+G+F V + ++ G E+A K+
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 417 -----FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
H S S E F LV + T G L + + + Y + + + LE ++
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILESVNH 118
Query: 472 GYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQS 512
+ I+H DLKP N LL L+DFG+A + G+ Q+
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA 162
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 208
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 77/158 (48%), Gaps = 19/158 (12%)
Query: 80 ELSFLSSMSNCKY-LKKLDISRNPLDGFLPRVVGNFS----QSLEFIWMSDCNISGGISE 134
EL+F N + K LD+S NPL R +G++S L+ + +S C I
Sbjct: 18 ELNFYKIPDNLPFSTKNLDLSFNPL-----RHLGSYSFFSFPELQVLDLSRCEIQTIEDG 72
Query: 135 EIGNLTDLISIDLGGNKLN----GSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVL 190
+L+ L ++ L GN + G+ S L LQKL L LE + P + HL L
Sbjct: 73 AYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVALETNLASLE-NFP--IGHLKTL 128
Query: 191 FQLDLRGNKL-SGSIPTCFGNLTALRNLHLDSNELTSI 227
+L++ N + S +P F NLT L +L L SN++ SI
Sbjct: 129 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 166
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 173
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 36/146 (24%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTT----------------- 435
IG+G FG V++ + + G E A+K+F FR + T
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 95
Query: 436 NGSLEKVLYSSNY-----ILDILQRLNIMID--------VTSALEYLHFGY-----STPI 477
NG+ ++ S+Y + D L R + ++ S L +LH I
Sbjct: 96 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 155
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIA 503
H DLK N L+ N ++D G+A
Sbjct: 156 AHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLXGTPE-----YLAP 207
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 36/146 (24%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTT----------------- 435
IG+G FG V++ + + G E A+K+F FR + T
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 108
Query: 436 NGSLEKVLYSSNY-----ILDILQRLNIMID--------VTSALEYLHFGY-----STPI 477
NG+ ++ S+Y + D L R + ++ S L +LH I
Sbjct: 109 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 168
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIA 503
H DLK N L+ N ++D G+A
Sbjct: 169 AHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L Y LD+ + +++AL YL S +H D+ N L
Sbjct: 90 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 146
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ N L DFG+++ + ED + + + I +MAP
Sbjct: 147 VSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 184
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 32/185 (17%)
Query: 370 ASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRAL 429
+ R +Q L+ + + +G G++G VYKA+ G A+K +E +
Sbjct: 9 SGRENLYFQGLM---EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPST 65
Query: 430 V---------LEYTTNGSLEKVLYSS--------------NYILDI----LQRLNIMIDV 462
L + SL V++S +LD LQ I I +
Sbjct: 66 AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL 125
Query: 463 TSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAII 522
L + + I+H DLKP N L++ + L+DFG+A+ +S T + +
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTL 183
Query: 523 GYMAP 527
Y AP
Sbjct: 184 WYRAP 188
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 32/185 (17%)
Query: 370 ASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRAL 429
+ R +Q L+ + + +G G++G VYKA+ G A+K +E +
Sbjct: 9 SGRENLYFQGLM---EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPST 65
Query: 430 V---------LEYTTNGSLEKVLYSS--------------NYILDI----LQRLNIMIDV 462
L + SL V++S +LD LQ I I +
Sbjct: 66 AIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL 125
Query: 463 TSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAII 522
L + + I+H DLKP N L++ + L+DFG+A+ +S T + +
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTL 183
Query: 523 GYMAP 527
Y AP
Sbjct: 184 WYRAP 188
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
L+++ + G L ++++ Y RL + V A++YLH I+H DLKP N
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENL 147
Query: 488 L---LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L LD++ +SDFG++K+ ED + GY+AP
Sbjct: 148 LYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L Y LD+ + +++AL YL S +H D+ N L
Sbjct: 92 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 148
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ N L DFG+++ + ED + + + I +MAP
Sbjct: 149 VSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 186
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 166
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 167 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 200
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 179
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L Y LD+ + +++AL YL S +H D+ N L
Sbjct: 89 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 145
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ N L DFG+++ + ED + + + I +MAP
Sbjct: 146 VSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 183
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 43/168 (25%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCS-------NE-------------------- 424
IG+G+ G+VY A + G E AI+ + NE
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 425 --DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
D +V+EY GSL V+ + +D Q + + ALE+LH S +IH ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRNI 143
Query: 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
K N LL + L+DFG +T E Q++ ++G +MAP
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSTMVGTPYWMAP 186
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 172
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 36/146 (24%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTT----------------- 435
IG+G FG V++ + + G E A+K+F FR + T
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 75
Query: 436 NGSLEKVLYSSNY-----ILDILQRLNIMID--------VTSALEYLHFGY-----STPI 477
NG+ ++ S+Y + D L R + ++ S L +LH I
Sbjct: 76 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 135
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIA 503
H DLK N L+ N ++D G+A
Sbjct: 136 AHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIH 479
C+ E ++ E+ T G+L L N + + L + ++SA+EYL IH
Sbjct: 285 CTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIH 341
Query: 480 CDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+L N L+ +N + ++DFG+++L+TG D I + AP
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAP 388
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 36/147 (24%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNED-----FRA------------------ 428
IG+G+F V AR + G E A+K+ + N FR
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 429 --------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
LV+EY + G + L + ++ + R + SA++Y H + I+H
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-QIVSAVQYCHQKF---IVHR 130
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLT 507
DLK N LLD ++ ++DFG + T
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSNEFT 157
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L Y LD+ + +++AL YL S +H D+ N L
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ N L DFG+++ + ED + + + I +MAP
Sbjct: 144 VSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 181
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 176
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 172
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 36/146 (24%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTT----------------- 435
IG+G FG V++ + + G E A+K+F FR + T
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 72
Query: 436 NGSLEKVLYSSNY-----ILDILQRLNIMID--------VTSALEYLHFGY-----STPI 477
NG+ ++ S+Y + D L R + ++ S L +LH I
Sbjct: 73 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 132
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIA 503
H DLK N L+ N ++D G+A
Sbjct: 133 AHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 119 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 208
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 179
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 429 LVLEYTTNGSLEKVLYS---SNYILDILQRLNIMIDVTSALEYLHF----GYSTPIIHCD 481
+V+EY G L V+ LD L +M +T AL+ H G++ ++H D
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT--VLHRD 141
Query: 482 LKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LKP N LD L DFG+A++L D+ + + + YM+P
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILN-HDEDFAK-EFVGTPYYMSP 185
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L Y LD+ + +++AL YL S +H D+ N L
Sbjct: 87 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ N L DFG+++ + ED + + + I +MAP
Sbjct: 144 VSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 181
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 171
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 74 LTSSTPELSFLSSMSNCKY-LKKLDISRNPLDGFLPRVVGNFS----QSLEFIWMSDCNI 128
+T EL+F N + K LD+S NPL R +G++S L+ + +S C I
Sbjct: 11 ITYQCEELNFYKIPDNLPFSTKNLDLSFNPL-----RHLGSYSFFSFPELQVLDLSRCEI 65
Query: 129 SGGISEEIGNLTDLISIDLGGNKLN----GSISITLGKLQKLQFLSFRGNELEGSIPNVL 184
+L+ L ++ L GN + G+ S L LQKL + LE + P +
Sbjct: 66 QTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVAVETNLASLE-NFP--I 121
Query: 185 CHLAVLFQLDLRGNKL-SGSIPTCFGNLTALRNLHLDSNELTSI 227
HL L +L++ N + S +P F NLT L +L L SN++ SI
Sbjct: 122 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 165
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 172
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L Y LD+ + +++AL YL S +H D+ N L
Sbjct: 115 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 171
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ N L DFG+++ + ED + + + I +MAP
Sbjct: 172 VSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 209
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 171
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 36/146 (24%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTT----------------- 435
IG+G FG V++ + + G E A+K+F FR + T
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 70
Query: 436 NGSLEKVLYSSNY-----ILDILQRLNIMID--------VTSALEYLHFGY-----STPI 477
NG+ ++ S+Y + D L R + ++ S L +LH I
Sbjct: 71 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 130
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIA 503
H DLK N L+ N ++D G+A
Sbjct: 131 AHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 172
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
L+++ + G L ++++ Y RL + V A++YLH I+H DLKP N
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENL 147
Query: 488 L---LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L LD++ +SDFG++K+ ED + GY+AP
Sbjct: 148 LYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 36/146 (24%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTT----------------- 435
IG+G FG V++ + + G E A+K+F FR + T
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD 69
Query: 436 NGSLEKVLYSSNY-----ILDILQRLNIMID--------VTSALEYLHFGY-----STPI 477
NG+ ++ S+Y + D L R + ++ S L +LH I
Sbjct: 70 NGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAI 129
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIA 503
H DLK N L+ N ++D G+A
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + Q +ASRR S +E+ R
Sbjct: 24 QFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV----------------- 66
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L+ + + H N L+LE + G L L + L + + +
Sbjct: 67 --SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNI-VAHLS--DFGIA 503
+ + YLH + I H DLKP N LLD NI + H+ DFG+A
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F IG GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
L+++ + G L ++++ Y RL + V A++YLH I+H DLKP N
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENL 147
Query: 488 L---LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L LD++ +SDFG++K+ ED + GY+AP
Sbjct: 148 LYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L Y LD+ + +++AL YL S +H D+ N L
Sbjct: 84 IIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 140
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ N L DFG+++ + ED + + + I +MAP
Sbjct: 141 VSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 178
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 76/181 (41%), Gaps = 42/181 (23%)
Query: 381 LRATDGFSANNLIGRGSFGSV-----------YKARL------------------QDGME 411
++A D + +IGRG+FG V Y +L +D M
Sbjct: 72 MKAED-YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 130
Query: 412 FAIK--VFHFSCSNEDFRAL--VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALE 467
FA V C+ +D + L V+EY G L ++ SNY + +V AL+
Sbjct: 131 FANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFYTAEVVLALD 188
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQT-LAIIGYMA 526
+H S +IH D+KP N LLD + L+DFG + ++ M T + Y++
Sbjct: 189 AIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTC--MKMDETGMVHCDTAVGTPDYIS 243
Query: 527 P 527
P
Sbjct: 244 P 244
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGA 196
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 70/169 (41%), Gaps = 39/169 (23%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFRALVLE-----YTTNGSLEKVLYSS 446
+GRG++G V K R + G A+K + ++++ + L+++ T + Y +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 118
Query: 447 ----------------------NYILDILQRL------NIMIDVTSALEYLHFGYSTPII 478
++D Q + I + + ALE+LH S +I
Sbjct: 119 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VI 176
Query: 479 HCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
H D+KP N L++ + DFGI+ L S+ +T YMAP
Sbjct: 177 HRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKTIDAGCKPYMAP 222
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F IG GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 208
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 19/158 (12%)
Query: 80 ELSFLSSMSNCKY-LKKLDISRNPLDGFLPRVVGNFS----QSLEFIWMSDCNISGGISE 134
EL+F N + K LD+S NPL R +G++S L+ + +S C I
Sbjct: 18 ELNFYKIPDNLPFSTKNLDLSWNPL-----RHLGSYSFFSFPELQVLDLSRCEIQTIEDG 72
Query: 135 EIGNLTDLISIDLGGNKLN----GSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVL 190
+L+ L ++ L GN + G+ S L LQKL + LE + P + HL L
Sbjct: 73 AYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVAVETNLASLE-NFP--IGHLKTL 128
Query: 191 FQLDLRGNKL-SGSIPTCFGNLTALRNLHLDSNELTSI 227
+L++ N + S +P F NLT L +L L SN++ SI
Sbjct: 129 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 166
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 19/158 (12%)
Query: 80 ELSFLSSMSNCKY-LKKLDISRNPLDGFLPRVVGNFS----QSLEFIWMSDCNISGGISE 134
EL+F N + K LD+S NPL R +G++S L+ + +S C I
Sbjct: 17 ELNFYKIPDNLPFSTKNLDLSWNPL-----RHLGSYSFFSFPELQVLDLSRCEIQTIEDG 71
Query: 135 EIGNLTDLISIDLGGNKLN----GSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVL 190
+L+ L ++ L GN + G+ S L LQKL + LE + P + HL L
Sbjct: 72 AYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVAVETNLASLE-NFP--IGHLKTL 127
Query: 191 FQLDLRGNKL-SGSIPTCFGNLTALRNLHLDSNELTSI 227
+L++ N + S +P F NLT L +L L SN++ SI
Sbjct: 128 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 165
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 139 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 194
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 195 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 228
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + Q +ASRR S +E+ R
Sbjct: 24 QFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV----------------- 66
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L+ + + H N L+LE + G L L + L + + +
Sbjct: 67 --SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNI-VAHLS--DFGIA 503
+ + YLH + I H DLKP N LLD NI + H+ DFG+A
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 208
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 12/103 (11%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
L+++ + G L ++++ Y RL + V A++YLH I+H DLKP N
Sbjct: 93 LIMQLVSGGELFDRIVEKGFYTERDASRL--IFQVLDAVKYLH---DLGIVHRDLKPENL 147
Query: 488 L---LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L LD++ +SDFG++K+ ED + GY+AP
Sbjct: 148 LYYSLDEDSKIMISDFGLSKM---EDPGSVLSTACGTPGYVAP 187
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + Q +ASRR S +E+ R
Sbjct: 24 QFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV----------------- 66
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L+ + + H N L+LE + G L L + L + + +
Sbjct: 67 --SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNI-VAHLS--DFGIA 503
+ + YLH + I H DLKP N LLD NI + H+ DFG+A
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
H S S E F LV + T G L + + + Y + + + LE ++ +
Sbjct: 95 LHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIHQILESVNHIHQHD 150
Query: 477 IIHCDLKPHNKLLDDNI---VAHLSDFGIAKLLTGEDQS 512
I+H DLKP N LL L+DFG+A + GE Q+
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQA 189
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+VLEY G L + S + + + R+ + + SA+ Y+H S H DLKP N L
Sbjct: 85 MVLEYCPGGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH---SQGYAHRDLKPENLL 140
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
D+ L DFG+ G QT + Y AP
Sbjct: 141 FDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAP 178
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
L++E+ +GSL++ L + +++ Q+L + + ++YL S +H DL N L
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL 158
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMT 514
++ + DFG+ K + + + T
Sbjct: 159 VESEHQVKIGDFGLTKAIETDKEXXT 184
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 208
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
L++E+ +GSL++ L + +++ Q+L + + ++YL S +H DL N L
Sbjct: 90 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVL 146
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMT 514
++ + DFG+ K + + + T
Sbjct: 147 VESEHQVKIGDFGLTKAIETDKEXXT 172
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 119 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 174
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 175 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 208
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N L+D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 19/158 (12%)
Query: 80 ELSFLSSMSNCKY-LKKLDISRNPLDGFLPRVVGNFS----QSLEFIWMSDCNISGGISE 134
EL+F N + K LD+S NPL R +G++S L+ + +S C I
Sbjct: 16 ELNFYKIPDNLPFSTKNLDLSFNPL-----RHLGSYSFFSFPELQVLDLSRCEIQTIEDG 70
Query: 135 EIGNLTDLISIDLGGNKLN----GSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVL 190
+L+ L ++ L GN + G+ S L LQKL + LE + P + HL L
Sbjct: 71 AYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVAVETNLASLE-NFP--IGHLKTL 126
Query: 191 FQLDLRGNKL-SGSIPTCFGNLTALRNLHLDSNELTSI 227
+L++ N + S +P F NLT L +L L SN++ SI
Sbjct: 127 KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + Q +ASRR S +E+ R
Sbjct: 24 QFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV----------------- 66
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L+ + + H N L+LE + G L L + L + + +
Sbjct: 67 --SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNI-VAHLS--DFGIA 503
+ + YLH + I H DLKP N LLD NI + H+ DFG+A
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 64/176 (36%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N ++D ++DFG+AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 69/177 (38%), Gaps = 40/177 (22%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQD-GMEFAIKVFH---------FSCSNEDFRAL----- 429
D F ++G+GSFG V AR+++ G +A+KV C+ + R L
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 430 -------------------VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH 470
V+E+ G L + S + R ++ SAL +LH
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMFLH 141
Query: 471 FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
II+ DLK N LLD L+DFG+ K G +T Y+AP
Sbjct: 142 ---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAP 193
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 34/158 (21%)
Query: 377 YQELLRATDGFSANNLIGRGSFGSVY--KARLQDGMEFAIKVFHFSCSNEDFR--ALVLE 432
Y+ + + ++ F + IG G+F SVY A+LQ G E I + H ++ R A +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 433 YTTNGSLEKVL------------------YSSNYILDILQRLNI------MIDVTSALEY 468
T G + V+ LDIL L+ M+++ AL+
Sbjct: 73 LTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKR 132
Query: 469 LH-FGYSTPIIHCDLKPHNKLLDDNIVAH-LSDFGIAK 504
+H FG I+H D+KP N L + + + L DFG+A+
Sbjct: 133 IHQFG----IVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGE 509
IM + A++YLH S I H D+KP N L N + L+DFG AK TGE
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGE 173
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPN----VSNMQPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + Q +ASRR S +E+ R
Sbjct: 24 QFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREV----------------- 66
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L+ + + H N L+LE + G L L + L + + +
Sbjct: 67 --SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNI-VAHLS--DFGIA 503
+ + YLH + I H DLKP N LLD NI + H+ DFG+A
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 412 FAIKVFHFSCSNED-FRALVLEYTTNGSLEKVLYSSNYILDILQRL--NIMIDVTSALEY 468
+ ++ F +N D F A+ L T L+K + I +R+ + + + AL Y
Sbjct: 85 YIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGP-----IPERILGKMTVAIVKALYY 139
Query: 469 LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L + +IH D+KP N LLD+ L DFGI+ L +D++ ++ A YMAP
Sbjct: 140 LKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLV-DDKAKDRSAGCA--AYMAP 193
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V ++YL S
Sbjct: 87 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 143
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 189
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V ++YL S
Sbjct: 113 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 169
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 215
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 111 MVMEYVPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 166
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 167 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 200
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 39/171 (22%)
Query: 368 PQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGME-FAIKVF--------- 417
P+ ++ R S Q L+ D F + ++G+GSFG V+ A + + FAIK
Sbjct: 1 PELNKERPSLQIKLKIED-FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDD 59
Query: 418 ----------------------HFSCSNEDFRAL--VLEYTTNGSLEKVLYSSNYILDIL 453
H C+ + L V+EY G L + S + D+
Sbjct: 60 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLS 118
Query: 454 QRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
+ ++ L++LH S I++ DLK N LLD + ++DFG+ K
Sbjct: 119 RATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK 166
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N ++D ++DFG AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARF-YAAQIVLTFEYLH- 159
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N ++D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAP 208
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
LE +H + I+H DLKP N L+ D ++ L DFGIA + + + + + + YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 526 AP 527
P
Sbjct: 196 PP 197
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY GSL Y + + + Q L + + YLH + IH DL N L
Sbjct: 112 LVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVL 166
Query: 489 LDDNIVAHLSDFGIAK 504
LD++ + + DFG+AK
Sbjct: 167 LDNDRLVKIGDFGLAK 182
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L + LD+ + +++AL YL S +H D+ N L
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ N L DFG+++ + ED + + + I +MAP
Sbjct: 144 VSSNDCVKLGDFGLSRYM--EDSTXXKASKGKLPIKWMAP 181
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 44/174 (25%)
Query: 394 GRGSFGSVYKARLQDGMEFAIKVFHF----SCSNE--------------------DFRA- 428
RG FG V+KA+L + A+K+F S NE + R
Sbjct: 33 ARGRFGCVWKAQLLNEY-VAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 429 -------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF-------GYS 474
L+ + GSL L ++ ++ + +I + L YLH G+
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDGHK 149
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
I H D+K N LL +N+ A ++DFG+A K G+ T Q + YMAP
Sbjct: 150 PAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQ-VGTRRYMAP 202
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N +
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLI 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V ++YL S
Sbjct: 114 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 170
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 216
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 15/123 (12%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDIL------------QRLNIMIDVTS 464
F+ C D +V EY +G L K L + ++ Q L+I + +
Sbjct: 80 FYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAA 139
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+ YL S +H DL N L+ +N++ + DFG+++ + D T+ I +
Sbjct: 140 GMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW 196
Query: 525 MAP 527
M P
Sbjct: 197 MPP 199
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 461 DVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
++ LE LH I++ DLKP N LLDD+ +SD G+A + + T +
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVG 347
Query: 521 IIGYMAP 527
+GYMAP
Sbjct: 348 TVGYMAP 354
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQT 516
++M + L++LH S ++H DLKP N L+ + L+DFG+A++ + + M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALT 177
Query: 517 QTLAIIGYMAP 527
+ + Y AP
Sbjct: 178 SVVVTLWYRAP 188
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V ++YL S
Sbjct: 92 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 148
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 194
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 64/176 (36%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 158
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N ++D ++DFG+AK + G + T Y+AP
Sbjct: 159 --SLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V ++YL S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 149
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 195
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 74 LTSSTPELSFLSSMSNCKY-LKKLDISRNPLDGFLPRVVGNFS----QSLEFIWMSDCNI 128
+T EL+F N + K LD+S NPL R +G++S L+ + +S C I
Sbjct: 34 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPL-----RHLGSYSFFSFPELQVLDLSRCEI 88
Query: 129 SGGISEEIGNLTDLISIDLGGNKLN----GSISITLGKLQKLQFLSFRGNELEGSIPNVL 184
+L+ L ++ L GN + G+ S L LQKL + LE + P +
Sbjct: 89 QTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVAVETNLASLE-NFP--I 144
Query: 185 CHLAVLFQLDLRGNKL-SGSIPTCFGNLTALRNLHLDSNELTSI 227
HL L +L++ N + S +P F NLT L +L L SN++ SI
Sbjct: 145 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 188
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 25/158 (15%)
Query: 138 NLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNEL-EGSIPNVLCHLAVLFQLDLR 196
+L +LI +D+ + + L L+ L GN E +P++ L L LDL
Sbjct: 443 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 502
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIG 256
+L PT F +L++L+ L++ N S+ + P K
Sbjct: 503 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT---------------------FPYKC- 540
Query: 257 NLKVLTRIDFSRNNLLGDIPTTIQGL-KSLQFLSLGHN 293
L L +D+S N+++ +Q SL FL+L N
Sbjct: 541 -LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 577
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 78/187 (41%), Gaps = 6/187 (3%)
Query: 117 SLEFIWMSDCNIS--GGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGN 174
SLEF+ +S +S G S+ L +DL N + S LG L++L+ L F+ +
Sbjct: 372 SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHS 430
Query: 175 EL-EGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTS--IPSIL 231
L + S +V L L LD+ + F L++L L + N +P I
Sbjct: 431 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 490
Query: 232 WNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLG 291
L+++ +LD P+ +L L ++ S NN + L SLQ L
Sbjct: 491 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYS 550
Query: 292 HNRLQGS 298
N + S
Sbjct: 551 LNHIMTS 557
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
Query: 74 LTSSTPELSFLSSMSNCKY-LKKLDISRNPLDGFLPRVVGNFS----QSLEFIWMSDCNI 128
+T EL+F N + K LD+S NPL R +G++S L+ + +S C I
Sbjct: 10 ITYQCMELNFYKIPDNLPFSTKNLDLSFNPL-----RHLGSYSFFSFPELQVLDLSRCEI 64
Query: 129 SGGISEEIGNLTDLISIDLGGNKLN----GSISITLGKLQKLQFLSFRGNELEGSIPNVL 184
+L+ L ++ L GN + G+ S L LQKL + LE P +
Sbjct: 65 QTIEDGAYQSLSHLSTLILTGNPIQSLALGAFS-GLSSLQKLVAVETNLASLEN-FP--I 120
Query: 185 CHLAVLFQLDLRGNKL-SGSIPTCFGNLTALRNLHLDSNELTSI 227
HL L +L++ N + S +P F NLT L +L L SN++ SI
Sbjct: 121 GHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSI 164
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 117 SLEFIWMSDCNIS--GGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGN 174
SLEF+ +S +S G S+ T L +DL N + S LG L++L+ L F+ +
Sbjct: 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLG-LEQLEHLDFQHS 406
Query: 175 EL-EGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTS--IPSIL 231
L + S +V L L LD+ + F L++L L + N +P I
Sbjct: 407 NLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF 466
Query: 232 WNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLG 291
L+++ +LD P+ +L L ++ S NN + L SLQ L
Sbjct: 467 TELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYS 526
Query: 292 HNRLQGS 298
N + S
Sbjct: 527 LNHIMTS 533
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 25/157 (15%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNEL-EGSIPNVLCHLAVLFQLDLRG 197
L +LI +D+ + + L L+ L GN E +P++ L L LDL
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 198 NKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGN 257
+L PT F +L++L+ L++ N S+ + P K
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT---------------------FPYKC-- 516
Query: 258 LKVLTRIDFSRNNLLGDIPTTIQGL-KSLQFLSLGHN 293
L L +D+S N+++ +Q SL FL+L N
Sbjct: 517 LNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQN 553
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 461 DVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
++ LE LH I++ DLKP N LLDD+ +SD G+A + + T +
Sbjct: 294 EICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---EGQTIKGRVG 347
Query: 521 IIGYMAP 527
+GYMAP
Sbjct: 348 TVGYMAP 354
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQT 516
++M + L++LH S ++H DLKP N L+ + L+DFG+A++ + + M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALT 177
Query: 517 QTLAIIGYMAP 527
+ + Y AP
Sbjct: 178 SVVVTLWYRAP 188
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V ++YL S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 151
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 197
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N +
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V ++YL S
Sbjct: 90 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 146
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 192
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 94/221 (42%), Gaps = 25/221 (11%)
Query: 93 LKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISE-EIG-----NLTDLISID 146
LKKL ++ N D +F + D I G + + ++G L +L +D
Sbjct: 302 LKKLVLNANSFDQLCQINAASFPS------LRDLYIKGNMRKLDLGTRCLEKLENLQKLD 355
Query: 147 LGGNKLNGS--ISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSI 204
L + + S ++ L L+ LQ+L+ NE G L LD+ L
Sbjct: 356 LSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLELLDVAFTHLHVKA 415
Query: 205 P-TCFGNLTALRNLHLDSNEL-TSIPSILWNLKDILYLDFWSNLFVGPLPSK------IG 256
P + F NL LR L+L L TS +L L+D+ +L+ N F SK +G
Sbjct: 416 PHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVG 475
Query: 257 NLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQG 297
+L++L S NLL GL+++ L L HN L G
Sbjct: 476 SLEILI---LSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTG 513
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 84 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 141 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 179
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 85 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 141
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 142 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 180
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V ++YL S
Sbjct: 94 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---AS 150
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGA 196
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 49/179 (27%)
Query: 378 QELLRATDGFSANNLIGRGSFGSVYKARL--QDG--MEFAIKVFHF----SCSNEDF--- 426
+++L F+ ++G+G FGSV +A+L +DG ++ A+K+ S E+F
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 427 ----------------------RA--------LVLEYTTNGSLEKVLYSSN-----YILD 451
RA ++L + +G L L +S + L
Sbjct: 76 AACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLP 135
Query: 452 ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510
+ + M+D+ +EYL S IH DL N +L +++ ++DFG+++ + D
Sbjct: 136 LQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 116 QSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNE 175
QS +SD G LT L ++L N+L + L +L L N+
Sbjct: 43 QSTGLATLSDATFRG--------LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94
Query: 176 LEGSIP-NVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229
L S+P V HL L +L L GN+L F LT L+ L L++N+L SIP+
Sbjct: 95 L-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 138 NLTDLISIDLGGNKLNGSISITLG---KLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLD 194
+LT+L ++ L N+L S+ LG L +L L GN+L+ V L L +L
Sbjct: 81 DLTELGTLGLANNQL---ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137
Query: 195 LRGNKLSGSIPT-CFGNLTALRNLHLDSNELTSIP 228
L N+L SIP F LT L+ L L +N+L S+P
Sbjct: 138 LNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVP 171
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 74/178 (41%), Gaps = 26/178 (14%)
Query: 125 DCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVL 184
DC S G D +DL L T L KL +L+ N+L+ V
Sbjct: 20 DCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVF 79
Query: 185 CHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWS 244
L L L L N+L+ F +LT L L+L N+L S+PS +++
Sbjct: 80 DDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFD----------- 128
Query: 245 NLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPT-TIQGLKSLQFLSLGHNRLQGSIPN 301
++ LK L R++ N L IP L +LQ LSL N+LQ S+P+
Sbjct: 129 ---------RLTKLKEL-RLN---TNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH 172
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 6/106 (5%)
Query: 138 NLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRG 197
+LT L + LGGN+L S +L KL+ L N+L+ L L L L
Sbjct: 105 HLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLST 164
Query: 198 NKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFW 243
N+L F L L+ + L N+ +ILYL W
Sbjct: 165 NQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC------EILYLSQW 204
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C E + LV+E G L K L + ++ D + ++ V+ ++YL + +H
Sbjct: 81 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHR 135
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTG-EDQSMTQTQTLAIIGYMAP 527
DL N LL A +SDFG++K L E+ QT + + AP
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAP 183
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 86 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 142
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 143 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 181
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 41/162 (25%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARL------------------------QDGMEFAIKVFH 418
A + IG+G FG V+K RL + EF +VF
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 419 FSCSNE-----------DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALE 467
S N + +V+E+ G L L + + +L +M+D+ +E
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 468 YLHFGYSTPIIHCDLKPHN---KLLDDN--IVAHLSDFGIAK 504
Y+ + PI+H DL+ N + LD+N + A ++DF +++
Sbjct: 137 YMQ-NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ 177
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALV---------LEYTTNGSLEKVL 443
IG G++G VYKA+ G FA+K +E + L+++ L V+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 444 YSSNYILDIL----QRLNIMIDVTSA--------------LEYLHFGYSTPIIHCDLKPH 485
++ ++ + Q L ++DV L + + + ++H DLKP
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 486 NKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
N L++ ++DFG+A+ + T + + Y AP
Sbjct: 130 NLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAP 169
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 45/180 (25%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQDGME-FAIKVF-------------------------- 417
+ F +IGRG+FG V +L++ + FA+K+
Sbjct: 74 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDS 133
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYS-SNYILDILQRLNI--MIDVTSALEY 468
H++ +++ LV++Y G L +L + + + + R + M+ ++
Sbjct: 134 KWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 469 LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
LH+ +H D+KP N L+D N L+DFG KL+ ED ++ + + Y++P
Sbjct: 194 LHY------VHRDIKPDNILMDMNGHIRLADFGSCLKLM--EDGTVQSSVAVGTPDYISP 245
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY + G + L + + + R + SA++Y H + I+H DLK N L
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 489 LDDNIVAHLSDFGIAKLLT 507
LD ++ ++DFG + T
Sbjct: 146 LDADMNIKIADFGFSNEFT 164
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C E + LV+E G L K L + ++ D + ++ V+ ++YL + +H
Sbjct: 439 CEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE---ESNFVHR 493
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTG-EDQSMTQTQTLAIIGYMAP 527
DL N LL A +SDFG++K L E+ QT + + AP
Sbjct: 494 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 541
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 116 QSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNE 175
QS +SD G LT L ++L N+L + L +L L N+
Sbjct: 43 QSTGLATLSDATFRG--------LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94
Query: 176 LEGSIP-NVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229
L S+P V HL L +L L GN+L F LT L+ L L++N+L SIP+
Sbjct: 95 L-ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPA 148
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 138 NLTDLISIDLGGNKLNGSISITLG---KLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLD 194
+LT+L ++ L N+L S+ LG L +L L GN+L+ V L L +L
Sbjct: 81 DLTELGTLGLANNQL---ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137
Query: 195 LRGNKLSGSIPT-CFGNLTALRNLHLDSNELTSIP 228
L N+L SIP F LT L+ L L +N+L S+P
Sbjct: 138 LNTNQLQ-SIPAGAFDKLTNLQTLSLSTNQLQSVP 171
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 141 DLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKL 200
D +DL L T L KL +L+ N+L+ V L L L L N+L
Sbjct: 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQL 95
Query: 201 SGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKV 260
+ F +LT L L+L N+L S+PS +++ ++ LK
Sbjct: 96 ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFD--------------------RLTKLKE 135
Query: 261 LTRIDFSRNNLLGDIPT-TIQGLKSLQFLSLGHNRLQGSIPN 301
L R++ N L IP L +LQ LSL N+LQ S+P+
Sbjct: 136 L-RLN---TNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH 172
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 84 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 141 LVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 179
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 426 FRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
F LV + G L EKV S I++ L ++V AL L+ I+H
Sbjct: 85 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL---LEVICALHKLN------IVHR 135
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DLKP N LLDD++ L+DFG + L D + Y+AP
Sbjct: 136 DLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREVCGTPSYLAP 179
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQT 516
++M + L++LH S ++H DLKP N L+ + L+DFG+A++ + + M T
Sbjct: 124 DMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ---MALT 177
Query: 517 QTLAIIGYMAP 527
+ + Y AP
Sbjct: 178 SVVVTLWYRAP 188
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL--TGEDQSMTQTQTLAIIG 523
L+Y+H S +IH DLKP N L+++N + DFG+A+ L + + T+ +A
Sbjct: 171 LKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 227
Query: 524 YMAP 527
Y AP
Sbjct: 228 YRAP 231
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 67/159 (42%), Gaps = 37/159 (23%)
Query: 384 TDGFSANNLIGRGSFGSVYKARLQDG--MEFAIKVFHFSCSN--EDFRALVLEYTTNG-- 437
TDG+ IG GS+ SV K + MEFA+K+ S + E+ L L Y +
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL-LRYGQHPNI 78
Query: 438 -SLEKVLYSSNYI------------LDILQRLN---------IMIDVTSALEYLHFGYST 475
+L+ V Y+ LD + R ++ +T +EYLH +
Sbjct: 79 ITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH---AQ 135
Query: 476 PIIHCDLKPHNKLLDDNI----VAHLSDFGIAKLLTGED 510
++H DLKP N L D + DFG AK L E+
Sbjct: 136 GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N L
Sbjct: 118 MVMEYVAGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLL 173
Query: 489 LDDNIVAHLSDFGIAKLLTG 508
+D ++DFG AK + G
Sbjct: 174 IDQQGYIQVTDFGFAKRVKG 193
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 190 LFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVG 249
L +L L GN L+ +P NL+ LR L L N LTS+P+ L + + Y F+ N+ V
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNM-VT 306
Query: 250 PLPSKIGNL 258
LP + GNL
Sbjct: 307 TLPWEFGNL 315
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 231 LWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSL 290
LW+ D+ SNL + + + I LTR+ + N L ++P I+ L +L+ L L
Sbjct: 225 LWHALDL------SNLQIFNISANIFKYDFLTRL-YLNGNSLTELPAEIKNLSNLRVLDL 277
Query: 291 GHNRL 295
HNRL
Sbjct: 278 SHNRL 282
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY + G + L + + + R + SA++Y H + I+H DLK N L
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 489 LDDNIVAHLSDFGIAKLLT 507
LD ++ ++DFG + T
Sbjct: 146 LDADMNIKIADFGFSNEFT 164
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C E + LV+E G L K L + ++ D + ++ V+ ++YL + +H
Sbjct: 75 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHR 129
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTG-EDQSMTQTQTLAIIGYMAP 527
DL N LL A +SDFG++K L E+ QT + + AP
Sbjct: 130 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 177
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 93 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 149
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 150 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 188
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 34/143 (23%)
Query: 393 IGRGSFGSVYKARLQ-DGMEFAIK--------------------VFHFS----------C 421
IGRG+FG V+ RL+ D A+K + +S C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 422 SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCD 481
+ + +V+E G L + L + L ++ D + +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 482 LKPHNKLLDDNIVAHLSDFGIAK 504
L N L+ + V +SDFG+++
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR 261
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL--TGEDQSMTQTQTLAIIG 523
L+Y+H S +IH DLKP N L+++N + DFG+A+ L + + T+ +A
Sbjct: 172 LKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 524 YMAP 527
Y AP
Sbjct: 229 YRAP 232
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C E + LV+E G L K L + ++ D + ++ V+ ++YL + +H
Sbjct: 440 CEAESW-MLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQVSMGMKYLE---ESNFVHR 494
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTG-EDQSMTQTQTLAIIGYMAP 527
DL N LL A +SDFG++K L E+ QT + + AP
Sbjct: 495 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 542
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N ++D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAP 208
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY + G + L + + + R + SA++Y H + I+H DLK N L
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 489 LDDNIVAHLSDFGIAKLLT 507
LD ++ ++DFG + T
Sbjct: 146 LDADMNIKIADFGFSNEFT 164
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALV---------LEYTTNGSLEKVL 443
IG G++G VYKA+ G FA+K +E + L+++ L V+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 444 YSSNYILDIL----QRLNIMIDVTSA--------------LEYLHFGYSTPIIHCDLKPH 485
++ ++ + Q L ++DV L + + + ++H DLKP
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 486 NKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
N L++ ++DFG+A+ + T + + Y AP
Sbjct: 130 NLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAP 169
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 84 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 141 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 179
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY + G + L + + + R + SA++Y H + I+H DLK N L
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 489 LDDNIVAHLSDFGIAKLLT 507
LD ++ ++DFG + T
Sbjct: 146 LDADMNIKIADFGFSNEFT 164
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N +
Sbjct: 119 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 174
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 175 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAP 208
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 92 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 148
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 149 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 187
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 34/143 (23%)
Query: 393 IGRGSFGSVYKARLQ-DGMEFAIK--------------------VFHFS----------C 421
IGRG+FG V+ RL+ D A+K + +S C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 422 SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCD 481
+ + +V+E G L + L + L ++ D + +EYL S IH D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 482 LKPHNKLLDDNIVAHLSDFGIAK 504
L N L+ + V +SDFG+++
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSR 261
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY + G + L + + + R + SA++Y H + I+H DLK N L
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 489 LDDNIVAHLSDFGIAKLLT 507
LD ++ ++DFG + T
Sbjct: 146 LDADMNIKIADFGFSNEFT 164
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C E + LV+E G L K L + ++ D + ++ V+ ++YL + +H
Sbjct: 81 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHR 135
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTG-EDQSMTQTQTLAIIGYMAP 527
DL N LL A +SDFG++K L E+ QT + + AP
Sbjct: 136 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 183
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 79 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 135
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 136 LVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 174
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 29/162 (17%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALV---------LEYTTNGSLEKVL 443
IG G++G VYKA+ G FA+K +E + L+++ L V+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 444 YSSNYILDIL----QRLNIMIDVTSA--------------LEYLHFGYSTPIIHCDLKPH 485
++ ++ + Q L ++DV L + + + ++H DLKP
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQ 129
Query: 486 NKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
N L++ ++DFG+A+ + T + + Y AP
Sbjct: 130 NLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAP 169
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 84 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 140
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 141 LVSDTLSCKIADFGLARLI--EDAEXTAREGAKFPIKWTAP 179
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 31/176 (17%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV--------- 430
L + + F IG G++G VYKAR + G A+K E +
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 431 LEYTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHF 471
L + L V+++ N + + Q L +D ++ L+ L F
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 176
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C E + LV+E G L K L + ++ D + ++ V+ ++YL + +H
Sbjct: 77 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHR 131
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTG-EDQSMTQTQTLAIIGYMAP 527
DL N LL A +SDFG++K L E+ QT + + AP
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 179
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 90 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 146
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 147 LVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 185
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 89 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 145
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 146 LVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 184
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G + L + R + EYLH S +I+ DLKP N +
Sbjct: 118 MVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH---SLDLIYRDLKPENLM 173
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+D ++DFG AK + G + T Y+AP
Sbjct: 174 IDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAP 207
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 63/176 (35%), Gaps = 42/176 (23%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------------- 417
D F +G GSFG V + ++ G +A+K+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 418 ------HFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
FS + +V+EY G + L + R + EYLH
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARF-YAAQIVLTFEYLH- 159
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +I+ DLKP N ++D ++DFG AK + G + T Y+AP
Sbjct: 160 --SLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAP 208
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH DL+ N
Sbjct: 90 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANI 146
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 147 LVSDTLSCKIADFGLARLI--EDNEXTAREGAKFPIKWTAP 185
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C E + LV+E G L K L + ++ D + ++ V+ ++YL + +H
Sbjct: 87 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHR 141
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTG-EDQSMTQTQTLAIIGYMAP 527
DL N LL A +SDFG++K L E+ QT + + AP
Sbjct: 142 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 189
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 426 FRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
F LV + G L EKV S I++ L ++V AL L+ I+H
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL---LEVICALHKLN------IVHR 148
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DLKP N LLDD++ L+DFG + L D + Y+AP
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQL---DPGEKLREVCGTPSYLAP 192
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 68/176 (38%), Gaps = 46/176 (26%)
Query: 387 FSANNLIGRGSFGSVYKARLQDGME-FAIKVFHF------------------SCSNEDFR 427
F+ + IG+GSFG VYK E AIK+ C +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 428 A------------LVLEYTTNGSLEKVLY----SSNYILDILQRLNIMIDVTSALEYLHF 471
+++EY GS +L YI IL+ ++ L+YLH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR------EILKGLDYLH- 133
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IH D+K N LL + L+DFG+A LT D + + + +MAP
Sbjct: 134 --SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTPFWMAP 185
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILD-ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
++ +E+ GSL++VL + I + IL +++I V L YL + I+H D+KP N
Sbjct: 90 SICMEHMDGGSLDQVLKEAKRIPEEILGKVSIA--VLRGLAYLREKHQ--IMHRDVKPSN 145
Query: 487 KLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
L++ L DFG++ +L+ S T++ YMAP
Sbjct: 146 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMAP 182
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 70/176 (39%), Gaps = 31/176 (17%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV--------- 430
L + + F IG G++G VYKAR + G A+K E +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 431 LEYTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHF 471
L + L V+++ N + + Q L +D ++ L+ L F
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+E G L K L + + ++ V+ ++YL +H DL N L
Sbjct: 86 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVL 142
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMT 514
L + A +SDFG++K L +D T
Sbjct: 143 LVNRHYAKISDFGLSKALGADDSYYT 168
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C E + LV+E G L K L + ++ D + ++ V+ ++YL + +H
Sbjct: 95 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHR 149
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTG-EDQSMTQTQTLAIIGYMAP 527
DL N LL A +SDFG++K L E+ QT + + AP
Sbjct: 150 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 197
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 55/141 (39%), Gaps = 39/141 (27%)
Query: 382 RATDGFSANNLIGRGSFGSVYK-ARLQDGMEFAIK------------------------- 415
R T F IG G FGSV+K + DG +AIK
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 416 ------VFHFSCSNEDFRALVL-EYTTNGSLEKVLYSSNYILDILQRL---NIMIDVTSA 465
V +FS ED L+ EY GSL + + I+ + ++++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 466 LEYLHFGYSTPIIHCDLKPHN 486
L Y+H S ++H D+KP N
Sbjct: 126 LRYIH---SMSLVHMDIKPSN 143
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 55/141 (39%), Gaps = 39/141 (27%)
Query: 382 RATDGFSANNLIGRGSFGSVYK-ARLQDGMEFAIK------------------------- 415
R T F IG G FGSV+K + DG +AIK
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 416 ------VFHFSCSNEDFRALVL-EYTTNGSLEKVLYSSNYILDILQRL---NIMIDVTSA 465
V +FS ED L+ EY GSL + + I+ + ++++ V
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 466 LEYLHFGYSTPIIHCDLKPHN 486
L Y+H S ++H D+KP N
Sbjct: 128 LRYIH---SMSLVHMDIKPSN 145
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 31/176 (17%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV--------- 430
L + + F IG G++G VYKAR + G A+K E +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 431 LEYTTNGSLEKVLYSSNYILDILQRLNI----MIDVTSA---------------LEYLHF 471
L + L V+++ N + + + L++ +D ++ L+ L F
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 55/141 (39%), Gaps = 39/141 (27%)
Query: 382 RATDGFSANNLIGRGSFGSVYK-ARLQDGMEFAIK------------------------- 415
R T F IG G FGSV+K + DG +AIK
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 416 ------VFHFSCSNEDFRALVL-EYTTNGSLEKVLYSSNYILDILQRL---NIMIDVTSA 465
V +FS ED L+ EY GSL + + I+ + ++++ V
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 466 LEYLHFGYSTPIIHCDLKPHN 486
L Y+H S ++H D+KP N
Sbjct: 124 LRYIH---SMSLVHMDIKPSN 141
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 157 SITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPT-CFGNLTALR 215
S+ G Q L N++ P V HL L QL NKL+ +IPT F LT L
Sbjct: 26 SVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLT-AIPTGVFDKLTQLT 84
Query: 216 NLHLDSNELTSIPSILW-NLKDILYLDFWSNLF 247
L L+ N L SIP + NLK + ++ ++N +
Sbjct: 85 QLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPW 117
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 133 SEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQ 192
S G TD + L N++ L LQ L F N+L V L L Q
Sbjct: 26 SVPAGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQ 85
Query: 193 LDLRGNKLSGSIPT-CFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFW 243
LDL N L SIP F NL +L +++L +N +DI+YL W
Sbjct: 86 LDLNDNHLK-SIPRGAFDNLKSLTHIYLYNNPWDC------ECRDIMYLRNW 130
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 55/141 (39%), Gaps = 39/141 (27%)
Query: 382 RATDGFSANNLIGRGSFGSVYK-ARLQDGMEFAIK------------------------- 415
R T F IG G FGSV+K + DG +AIK
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 416 ------VFHFSCSNEDFRALVL-EYTTNGSLEKVLYSSNYILDILQRL---NIMIDVTSA 465
V +FS ED L+ EY GSL + + I+ + ++++ V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 466 LEYLHFGYSTPIIHCDLKPHN 486
L Y+H S ++H D+KP N
Sbjct: 126 LRYIH---SMSLVHMDIKPSN 143
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
L+LEY + G L L ++ + +++ AL +LH II+ DLKP N +
Sbjct: 98 LILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH---QKGIIYRDLKPENIM 153
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L+ L+DFG+ K + D ++T T I YMAP
Sbjct: 154 LNHQGHVKLTDFGLCK-ESIHDGTVTHT-FCGTIEYMAP 190
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 173
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 31/176 (17%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV--------- 430
L + + F IG G++G VYKAR + G A+K E +
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 431 LEYTTNGSLEKVLYSSNYILDILQRLNI----MIDVTSA---------------LEYLHF 471
L + L V+++ N + + + L++ +D ++ L+ L F
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 174
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 70/177 (39%), Gaps = 37/177 (20%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEK 441
+ + F IG G++G VYKAR + G A+K E + + SL K
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI---SLLK 60
Query: 442 VLYSSNYI--LDIL--------------QRLNIMIDVTSA---------------LEYLH 470
L N + LD++ Q L +D ++ L+ L
Sbjct: 61 ELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 120
Query: 471 FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
F +S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 121 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 174
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 31/176 (17%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV--------- 430
L + + F IG G++G VYKAR + G A+K E +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 431 LEYTTNGSLEKVLYSSNYILDILQRLNI----MIDVTSA---------------LEYLHF 471
L + L V+++ N + + + L++ +D ++ L+ L F
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 175
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 15/86 (17%)
Query: 445 SSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFG 501
S Y+ ++++++ +AL Y H S ++H DLKP N L D + + DFG
Sbjct: 122 SEGYVAELMKQM------MNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFG 172
Query: 502 IAKLLTGEDQSMTQTQTLAIIGYMAP 527
+A+L ++ S T YMAP
Sbjct: 173 LAELFKSDEHS---TNAAGTALYMAP 195
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C E + LV+E G L K L + ++ D + ++ V+ ++YL + +H
Sbjct: 97 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHR 151
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTG-EDQSMTQTQTLAIIGYMAP 527
DL N LL A +SDFG++K L E+ QT + + AP
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 199
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
C E + LV+E G L K L + ++ D + ++ V+ ++YL + +H
Sbjct: 97 CEAESW-MLVMEMAELGPLNKYLQQNRHVKDK-NIIELVHQVSMGMKYLE---ESNFVHR 151
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTG-EDQSMTQTQTLAIIGYMAP 527
DL N LL A +SDFG++K L E+ QT + + AP
Sbjct: 152 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAP 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 174
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 21/118 (17%)
Query: 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGS 203
++D G L S+ G Q L N++ P V L L +LDL N+L+
Sbjct: 21 TVDCSGKSL---ASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVL 77
Query: 204 IPTCFGNLTALRNLHLDSNELTSIP----------SILWNL--------KDILYLDFW 243
F LT L L L+ N+L SIP + +W L DILYL W
Sbjct: 78 PAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRW 135
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 65/177 (36%), Gaps = 48/177 (27%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRA------------------------ 428
+G+G +G V++ Q G A+K+F FR
Sbjct: 45 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 103
Query: 429 --------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH---FGYS--T 475
L+ Y GSL L + LD + L I++ + S L +LH FG
Sbjct: 104 RHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 161
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQT-----LAIIGYMAP 527
I H DLK N L+ N ++D G+A + QS Q + YMAP
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 215
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLAR 168
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 169 GMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKW 225
Query: 525 MAP 527
MAP
Sbjct: 226 MAP 228
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 168
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 169 GMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKW 225
Query: 525 MAP 527
MAP
Sbjct: 226 MAP 228
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 172
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 48/118 (40%), Gaps = 21/118 (17%)
Query: 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGS 203
++D G L S+ G Q L N++ P V L L +LDL N+L+
Sbjct: 13 TVDCSGKSL---ASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVL 69
Query: 204 IPTCFGNLTALRNLHLDSNELTSIP----------SILWNL--------KDILYLDFW 243
F LT L L L+ N+L SIP + +W L DILYL W
Sbjct: 70 PAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACSDILYLSRW 127
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 123 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 174
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 172
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 172
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 171
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 433 YTTNGSLEKVLYSSNYILDILQRLNI----MIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + + L++ +D ++ L+ L F +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 173
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 172
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 171
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 173
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+L+ EY N KVLY + DI + ++ AL+Y H S I+H D+KPHN
Sbjct: 106 SLIFEYVNNTDF-KVLYPTLTDYDIRY---YIYELLKALDYCH---SQGIMHRDVKPHNV 158
Query: 488 LLDDNIVA-HLSDFGIAKL 505
++D + L D+G+A+
Sbjct: 159 MIDHELRKLRLIDWGLAEF 177
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 65/177 (36%), Gaps = 48/177 (27%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRA------------------------ 428
+G+G +G V++ Q G A+K+F FR
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 429 --------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH---FGYS--T 475
L+ Y GSL L + LD + L I++ + S L +LH FG
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQT-----LAIIGYMAP 527
I H DLK N L+ N ++D G+A + QS Q + YMAP
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 186
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+L+ EY N KVLY + DI + ++ AL+Y H S I+H D+KPHN
Sbjct: 125 SLIFEYVNNTDF-KVLYPTLTDYDIRY---YIYELLKALDYCH---SQGIMHRDVKPHNV 177
Query: 488 LLDDNIVA-HLSDFGIAKL 505
++D + L D+G+A+
Sbjct: 178 MIDHELRKLRLIDWGLAEF 196
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+K E + L +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 173
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 39/174 (22%)
Query: 387 FSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFH--------------------------- 418
F L+G+G+FG V R + G +A+K+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 419 -----FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ D V+EY G L L + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +++ D+K N +LD + ++DFG+ K G T Y+AP
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAP 174
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+L+ EY N KVLY + DI + ++ AL+Y H S I+H D+KPHN
Sbjct: 105 SLIFEYVNNTDF-KVLYPTLTDYDIRY---YIYELLKALDYCH---SQGIMHRDVKPHNV 157
Query: 488 LLDDNIVA-HLSDFGIAKL 505
++D + L D+G+A+
Sbjct: 158 MIDHELRKLRLIDWGLAEF 176
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+ E + L +
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 172
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 31/172 (18%)
Query: 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LEYT 434
+ F IG G++G VYKAR + G A+ E + L +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 435 TNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGYST 475
L V+++ N + + Q L +D ++ L+ L F +S
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
++H DLKP N L++ L+DFG+A+ + T T + + Y AP
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR--TYTHEVVTLWYRAP 171
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L + LD+ + +++AL YL S +H D+ N L
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 523
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ N L DFG+++ + ED + + + I +MAP
Sbjct: 524 VSSNDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 561
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILD-ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
++ +E+ GSL++VL + I + IL +++I V L YL + I+H D+KP N
Sbjct: 83 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 138
Query: 487 KLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L++ L DFG++ L E + + YM+P
Sbjct: 139 ILVNSRGEIKLCDFGVSGQLIDE----MANEFVGTRSYMSP 175
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 36/147 (24%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNED-----FRA------------------ 428
IG+G+F V AR + G E AIK+ + N FR
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 429 --------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
L++EY + G + L + + + R + SA++Y H I+H
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHR 135
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLT 507
DLK N LLD ++ ++DFG + T
Sbjct: 136 DLKAENLLLDADMNIKIADFGFSNEFT 162
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+L+ EY N KVLY + DI + ++ AL+Y H S I+H D+KPHN
Sbjct: 105 SLIFEYVNNTDF-KVLYPTLTDYDIRY---YIYELLKALDYCH---SQGIMHRDVKPHNV 157
Query: 488 LLDDNIVA-HLSDFGIAKL 505
++D + L D+G+A+
Sbjct: 158 MIDHELRKLRLIDWGLAEF 176
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+L+ EY N KVLY + DI + ++ AL+Y H S I+H D+KPHN
Sbjct: 104 SLIFEYVNNTDF-KVLYPTLTDYDIRY---YIYELLKALDYCH---SQGIMHRDVKPHNV 156
Query: 488 LLDDNIVA-HLSDFGIAKL 505
++D + L D+G+A+
Sbjct: 157 MIDHELRKLRLIDWGLAEF 175
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 39/174 (22%)
Query: 387 FSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFH--------------------------- 418
F L+G+G+FG V R + G +A+K+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 419 -----FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ D V+EY G L L + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +++ D+K N +LD + ++DFG+ K G T Y+AP
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 174
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+L+ EY N KVLY + DI + ++ AL+Y H S I+H D+KPHN
Sbjct: 104 SLIFEYVNNTDF-KVLYPTLTDYDIRY---YIYELLKALDYCH---SQGIMHRDVKPHNV 156
Query: 488 LLDDNIVA-HLSDFGIAKL 505
++D + L D+G+A+
Sbjct: 157 MIDHELRKLRLIDWGLAEF 175
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY GSL Y + + + Q L + + YLH S IH +L N L
Sbjct: 95 LVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVL 149
Query: 489 LDDNIVAHLSDFGIAK 504
LD++ + + DFG+AK
Sbjct: 150 LDNDRLVKIGDFGLAK 165
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 432 EYTTNGSLEKVLYSSNYILDILQRL----NIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
E NGS+ S LD +QR NIM + SAL YLH + I H D+KP N
Sbjct: 147 EEAINGSIHGFRES----LDFVQREKLISNIMRQIFSALHYLH---NQGICHRDIKPENF 199
Query: 488 LLDDN--IVAHLSDFGIA----KLLTGEDQSMT 514
L N L DFG++ KL GE MT
Sbjct: 200 LFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMT 232
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 168
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 169 GMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKW 225
Query: 525 MAP 527
MAP
Sbjct: 226 MAP 228
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 54/109 (49%), Gaps = 21/109 (19%)
Query: 426 FRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
F LV + G L EKV S I++ L ++V AL L+ I+H
Sbjct: 98 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL---LEVICALHKLN------IVHR 148
Query: 481 DLKPHNKLLDDNIVAHLSDFGIA-KLLTGED-QSMTQTQTLAIIGYMAP 527
DLKP N LLDD++ L+DFG + +L GE +S+ T + Y+AP
Sbjct: 149 DLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPS-----YLAP 192
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+L+ EY N KVLY + DI + ++ AL+Y H S I+H D+KPHN
Sbjct: 104 SLIFEYVNNTDF-KVLYPTLTDYDIRY---YIYELLKALDYCH---SQGIMHRDVKPHNV 156
Query: 488 LLDDNIVA-HLSDFGIAKL 505
++D + L D+G+A+
Sbjct: 157 MIDHELRKLRLIDWGLAEF 175
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 152
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+L+ EY N KVLY + DI + ++ AL+Y H S I+H D+KPHN
Sbjct: 104 SLIFEYVNNTDF-KVLYPTLTDYDIRY---YIYELLKALDYCH---SQGIMHRDVKPHNV 156
Query: 488 LLDDNIVA-HLSDFGIAKL 505
++D + L D+G+A+
Sbjct: 157 MIDHELRKLRLIDWGLAEF 175
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+L+ EY N KVLY + DI + ++ AL+Y H S I+H D+KPHN
Sbjct: 104 SLIFEYVNNTDF-KVLYPTLTDYDIRY---YIYELLKALDYCH---SQGIMHRDVKPHNV 156
Query: 488 LLDDNIVA-HLSDFGIAKL 505
++D + L D+G+A+
Sbjct: 157 MIDHELRKLRLIDWGLAEF 175
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 152
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 36/147 (24%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNED-----FRA------------------ 428
IG+G+F V AR + G E AIK+ + N FR
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 429 --------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHC 480
L++EY + G + L + + + R + SA++Y H I+H
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-QIVSAVQYCH---QKRIVHR 138
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLT 507
DLK N LLD ++ ++DFG + T
Sbjct: 139 DLKAENLLLDADMNIKIADFGFSNEFT 165
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+L+ EY N KVLY + DI + ++ AL+Y H S I+H D+KPHN
Sbjct: 104 SLIFEYVNNTDF-KVLYPTLTDYDIRY---YIYELLKALDYCH---SQGIMHRDVKPHNV 156
Query: 488 LLDDNIVA-HLSDFGIAKL 505
++D + L D+G+A+
Sbjct: 157 MIDHELRKLRLIDWGLAEF 175
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 65/177 (36%), Gaps = 48/177 (27%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRA------------------------ 428
+G+G +G V++ Q G A+K+F FR
Sbjct: 16 VGKGRYGEVWRGSWQ-GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS 74
Query: 429 --------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH---FGYS--T 475
L+ Y GSL L + LD + L I++ + S L +LH FG
Sbjct: 75 RHSSTQLWLITHYHEMGSLYDYLQLTT--LDTVSCLRIVLSIASGLAHLHIEIFGTQGKP 132
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQT-----LAIIGYMAP 527
I H DLK N L+ N ++D G+A + QS Q + YMAP
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAVM---HSQSTNQLDVGNNPRVGTKRYMAP 186
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 39/174 (22%)
Query: 387 FSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFH--------------------------- 418
F L+G+G+FG V R + G +A+K+
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 69
Query: 419 -----FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ D V+EY G L L + R ++ SALEYLH
Sbjct: 70 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 125
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +++ D+K N +LD + ++DFG+ K G T Y+AP
Sbjct: 126 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAP 177
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 39/174 (22%)
Query: 387 FSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFH--------------------------- 418
F L+G+G+FG V R + G +A+K+
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 71
Query: 419 -----FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ D V+EY G L L + R ++ SALEYLH
Sbjct: 72 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 127
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +++ D+K N +LD + ++DFG+ K G T Y+AP
Sbjct: 128 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 179
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 456 LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514
L+I I + A+E+LH S ++H DLKP N + V + DFG+ + +++ T
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 222
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 43/185 (23%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEK 441
AT + IG G++G+VYKAR G A+K L + +L +
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 442 VLYSSNY-----ILDIL--QRLNIMIDVTSALEY-------------------------- 468
L + + ++D+ R + I VT E+
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 469 ------LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAII 522
L F ++ I+H DLKP N L+ L+DFG+A++ + + M T + +
Sbjct: 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALTPVVVTL 183
Query: 523 GYMAP 527
Y AP
Sbjct: 184 WYRAP 188
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 39/174 (22%)
Query: 387 FSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFH--------------------------- 418
F L+G+G+FG V R + G +A+K+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 419 -----FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ D V+EY G L L + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +++ D+K N +LD + ++DFG+ K G T Y+AP
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 174
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILD-ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
++ +E+ GSL++VL + I + IL +++I V L YL + I+H D+KP N
Sbjct: 99 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 154
Query: 487 KLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
L++ L DFG++ +L+ S T++ YM+P
Sbjct: 155 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSP 191
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 98 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 157
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 158 GMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 214
Query: 525 MAP 527
MAP
Sbjct: 215 MAP 217
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG------- 472
+C++ ++ EY G L L + +L+ I S + LHF
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGM 177
Query: 473 ---YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IH D+ N LL + VA + DFG+A+ + + + + + +MAP
Sbjct: 178 AFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 235
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 39/174 (22%)
Query: 387 FSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFH--------------------------- 418
F L+G+G+FG V R + G +A+K+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 419 -----FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ D V+EY G L L + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +++ D+K N +LD + ++DFG+ K G T Y+AP
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKXFCGTPEYLAP 174
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 5/92 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
L+LE+ + G L + + +Y + + +N M L+++H I+H D+KP N +
Sbjct: 125 LILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIM 181
Query: 489 LDDNIVAHLS--DFGIAKLLTGEDQSMTQTQT 518
+ + + DFG+A L ++ T T
Sbjct: 182 CETKKASSVKIIDFGLATKLNPDEIVKVTTAT 213
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%)
Query: 217 LHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP 276
L+LD N+ T +P L N K + +D +N N+ L + S N L P
Sbjct: 36 LYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPP 95
Query: 277 TTIQGLKSLQFLSLGHN 293
T GLKSL+ LSL N
Sbjct: 96 RTFDGLKSLRLLSLHGN 112
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 97 DISRNPLDG----FLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKL 152
D++ LDG +P+ + N+ + L I +S+ IS ++ N+T L+++ L N+L
Sbjct: 32 DVTELYLDGNQFTLVPKELSNY-KHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90
Query: 153 NGSISITLGKLQKLQFLSFRGNEL----EGSIPNV--LCHLAV 189
T L+ L+ LS GN++ EG+ ++ L HLA+
Sbjct: 91 RCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAI 133
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 138
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 173
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 132
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 167
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 39/174 (22%)
Query: 387 FSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFH--------------------------- 418
F L+G+G+FG V R + G +A+K+
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPF 66
Query: 419 -----FSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
++ D V+EY G L L + R ++ SALEYLH
Sbjct: 67 LTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEYLH--- 122
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +++ D+K N +LD + ++DFG+ K G T Y+AP
Sbjct: 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKTFCGTPEYLAP 174
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMT 514
++ V SA++YLH I+H DLKP N L ++N ++DFG++K+ +Q+
Sbjct: 111 VIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGI 163
Query: 515 QTQTLAIIGYMAP 527
+ GY+AP
Sbjct: 164 MSTACGTPGYVAP 176
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 133
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 168
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCSNEDFRALV---------LE 432
+ + F IG G++G VYKAR + G A+K E + L
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 433 YTTNGSLEKVLYSSNYILDIL----QRLNIMIDVTSA---------------LEYLHFGY 473
+ L V+++ N + + Q L +D ++ L+ L F +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S ++H DLKP N L++ L+DFG+A+ + T + + Y AP
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR--TYXHEVVTLWYRAP 172
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 137
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 165
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 60/153 (39%), Gaps = 48/153 (31%)
Query: 393 IGRGSFG-SVYKARLQDGMEFAIKVFHFSCSNEDFRA----------------------- 428
IG GSFG ++ +DG ++ IK + S + R
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 429 --------LVLEYTTNGSLEK-------VLYSSNYILDILQRLNIMIDVTSALEYLHFGY 473
+V++Y G L K VL+ + ILD + + AL+++H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWF------VQICLALKHVH--- 142
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506
I+H D+K N L + L DFGIA++L
Sbjct: 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 153
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V +++L S
Sbjct: 154 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 210
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 256
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 141
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 176
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 101 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 160
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 161 GMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 217
Query: 525 MAP 527
MAP
Sbjct: 218 MAP 220
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILD-ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
++ +E+ GSL++VL + I + IL +++I V L YL + I+H D+KP N
Sbjct: 107 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 162
Query: 487 KLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
L++ L DFG++ +L+ S T++ YM+P
Sbjct: 163 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSP 199
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 168
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 169 GMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKW 225
Query: 525 MAP 527
MAP
Sbjct: 226 MAP 228
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 67/174 (38%), Gaps = 40/174 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAK-LLTGE-DQSMTQTQTLAIIGYMA 526
+H DL N +LD+ ++DFG+A+ +L E D +T + +MA
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMA 206
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 168
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 169 GMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 225
Query: 525 MAP 527
MAP
Sbjct: 226 MAP 228
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 139
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 174
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 134
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILD-ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
++ +E+ GSL++VL + I + IL +++I V L YL + I+H D+KP N
Sbjct: 142 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 197
Query: 487 KLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
L++ L DFG++ +L+ S T++ YM+P
Sbjct: 198 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSP 234
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 140
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 175
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 168
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 169 GMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 225
Query: 525 MAP 527
MAP
Sbjct: 226 MAP 228
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
L+D ++ L D+G+A+
Sbjct: 163 LIDHEHRKLRLIDWGLAEF 181
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 49/160 (30%)
Query: 384 TDGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKV-------------------------- 416
+D + +G+G+F V + G+EFA K+
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 417 -----FHFSCSNEDFRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSAL 466
H S E F LV + T G L + YS +Q++ L
Sbjct: 88 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI---------L 138
Query: 467 EYLHFGYSTPIIHCDLKPHNKLLDDN---IVAHLSDFGIA 503
E + + +S I+H +LKP N LL L+DFG+A
Sbjct: 139 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 178
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V +++L S
Sbjct: 100 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 156
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 202
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V +++L S
Sbjct: 96 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 152
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 198
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 96 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 155
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 156 GMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 212
Query: 525 MAP 527
MAP
Sbjct: 213 MAP 215
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 66/175 (37%), Gaps = 45/175 (25%)
Query: 394 GRGSFGSVYKARLQDGMEFAIKVF------HFSCSNEDFRA------------------- 428
RG FG V+KA+L + A+K+F + E F
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGS 82
Query: 429 -------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF--------GY 473
L+ + GSL Y I+ + ++ ++ L YLH G+
Sbjct: 83 NLEVELWLITAFHDKGSLTD--YLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGH 140
Query: 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
I H D K N LL ++ A L+DFG+A + G+ T Q + YMAP
Sbjct: 141 KPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQ-VGTRRYMAP 194
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 28/180 (15%)
Query: 85 SSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLIS 144
+ S + L+KL IS+N L P N SL + + D I L ++
Sbjct: 96 KAFSPLRKLQKLYISKNHLVEIPP----NLPSSLVELRIHDNRIRKVPKGVFSGLRNMNC 151
Query: 145 IDLGGNKLNGS--------------ISITLGKL--------QKLQFLSFRGNELEGSIPN 182
I++GGN L S + I+ KL + L L N+++
Sbjct: 152 IEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELE 211
Query: 183 VLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLK--DILYL 240
L + L++L L N++ L LR LHLD+N+L+ +P+ L +LK ++YL
Sbjct: 212 DLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYL 271
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 168
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 169 GMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 225
Query: 525 MAP 527
MAP
Sbjct: 226 MAP 228
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL-----------YSSNYILDILQRLNIMIDVT----S 464
+C+ + +++EY + G+L + L Y N + + ++ T
Sbjct: 155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLAR 214
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ +N V ++DFG+A+ + D T + +
Sbjct: 215 GMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW 271
Query: 525 MAP 527
MAP
Sbjct: 272 MAP 274
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
H + IIH D+KP N LLD + L DFGI+ L S+ +T+ YMAP
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV---DSIAKTRDAGCRPYMAP 194
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILD-ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
++ +E+ GSL++VL + I + IL +++I V L YL + I+H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 487 KLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
L++ L DFG++ +L+ S T++ YM+P
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSP 172
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILD-ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
++ +E+ GSL++VL + I + IL +++I V L YL + I+H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 487 KLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
L++ L DFG++ +L+ S T++ YM+P
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSP 172
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 60/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L + +D ++ L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLG---TKR 137
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V +++L S
Sbjct: 95 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 151
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 197
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILD-ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
++ +E+ GSL++VL + I + IL +++I V L YL + I+H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 487 KLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
L++ L DFG++ +L+ S T++ YM+P
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSP 172
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 68/178 (38%), Gaps = 42/178 (23%)
Query: 387 FSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNE--------------------- 424
F L+G G++G VYK R ++ G AIKV + E
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 425 --------------DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLH 470
D LV+E+ GS+ ++ N + L+ I L L
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGLS 143
Query: 471 FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY-MAP 527
+ +IH D+K N LL +N L DFG++ L D+++ + T Y MAP
Sbjct: 144 HLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTPYWMAP 198
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 63/164 (38%), Gaps = 34/164 (20%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFH---------------------------FSCSNED 425
+G G FG V+ + AIK ++ +E+
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 426 FRALVLEYTTNGSLEKVLY-SSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKP 484
+V EY GSL L L + +++ V + + Y+ IH DL+
Sbjct: 77 PIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRS 133
Query: 485 HNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
N L+ + ++ ++DFG+A+L+ ED T Q I + AP
Sbjct: 134 ANILVGNGLICKIADFGLARLI--EDNEXTARQGAKFPIKWTAP 175
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G + K L + D + + ++ +AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS-KFDEQRTATYITELANALSYC 129
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 56/150 (37%), Gaps = 37/150 (24%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HFSC 421
D F +G+G FG+VY AR Q+ A+KV H
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 422 SN--------EDFRA--LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
N D + L+LE+ G L K L D + M ++ AL Y H
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH- 132
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
+IH D+KP N L+ ++DFG
Sbjct: 133 --ERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 56/150 (37%), Gaps = 37/150 (24%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HFSC 421
D F +G+G FG+VY AR Q+ A+KV H
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 422 SN--------EDFRA--LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
N D + L+LE+ G L K L D + M ++ AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH- 131
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
+IH D+KP N L+ ++DFG
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G + K L + D + + ++ +AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLS-KFDEQRTATYITELANALSYC 129
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 58/148 (39%), Gaps = 40/148 (27%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRA------------------------ 428
IG+G +G V+ + + G + A+KVF + FR
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG 103
Query: 429 --------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG-YST---- 475
L+ +Y NGSL L S+ LD L + S L +LH +ST
Sbjct: 104 TGSWTQLYLITDYHENGSLYDYLKSTT--LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKP 161
Query: 476 PIIHCDLKPHNKLLDDNIVAHLSDFGIA 503
I H DLK N L+ N ++D G+A
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLA 189
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILD-ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
++ +E+ GSL++VL + I + IL +++I V L YL + I+H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 487 KLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
L++ L DFG++ +L+ S T++ YM+P
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSP 172
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 11/102 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILD-ILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
++ +E+ GSL++VL + I + IL +++I V L YL + I+H D+KP N
Sbjct: 80 SICMEHMDGGSLDQVLKKAGRIPEQILGKVSIA--VIKGLTYLREKHK--IMHRDVKPSN 135
Query: 487 KLLDDNIVAHLSDFGIA-KLLTGEDQSMTQTQTLAIIGYMAP 527
L++ L DFG++ +L+ S T++ YM+P
Sbjct: 136 ILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS-----YMSP 172
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 38/166 (22%)
Query: 390 NNLIGRGSFGSVYKARLQDG----MEFAIKVFH--------------------FSCSN-- 423
N +IGRG FG VY L D + A+K + FS N
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 424 ---------EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
E +VL Y +G L + + + + + + V +++L S
Sbjct: 93 SLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---AS 149
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+H DL N +LD+ ++DFG+A+ + ++ +T A
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGA 195
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY GSL Y + + + Q L + + YLH + IH L N L
Sbjct: 89 LVMEYVPLGSLRD--YLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVL 143
Query: 489 LDDNIVAHLSDFGIAK 504
LD++ + + DFG+AK
Sbjct: 144 LDNDRLVKIGDFGLAK 159
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 456 LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514
L+I + + A+E+LH S ++H DLKP N + V + DFG+ + +++ T
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 21/118 (17%)
Query: 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGS 203
++D G L S+ G Q L N + P V L L +LDL N+L+
Sbjct: 13 TVDCSGKSL---ASVPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVL 69
Query: 204 IPTCFGNLTALRNLHLDSNELTSIP----------SILWNL--------KDILYLDFW 243
F LT L L L+ N+L SIP + +W L DILYL W
Sbjct: 70 PAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWDCACSDILYLSRW 127
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY GSL Y + + + Q L + + YLH + IH L N L
Sbjct: 90 LVMEYVPLGSLRD--YLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVL 144
Query: 489 LDDNIVAHLSDFGIAK 504
LD++ + + DFG+AK
Sbjct: 145 LDNDRLVKIGDFGLAK 160
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 115 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 167
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 168 MIDHEHRKLRLIDWGLAEF 186
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL---------YSSNYILDILQRLN------IMIDVTS 464
+C+ + +++EY + G+L + L YS N + ++L+ V
Sbjct: 143 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR 202
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ ++ V ++DFG+A+ + D T + +
Sbjct: 203 GMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW 259
Query: 525 MAP 527
MAP
Sbjct: 260 MAP 262
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY NGSL L + + I +N ++D+ + + E + F IH +L+ N
Sbjct: 80 IITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAANI 136
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ D + ++DFG+A+L+ ED T + I + AP
Sbjct: 137 LVSDTLSCKIADFGLARLI--EDNEYTAREGAKFPIKWTAP 175
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 163 MIDHEHRKLRLIDWGLAEF 181
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 40/181 (22%)
Query: 385 DGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKVFHFS-------CSNEDFR--------- 427
D + +IG+G+F V + + G +FA+K+ + S ED +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 428 ------ALVLEYTTNGSLEKV---LYSSNYILDILQRLNIMIDVTSA---------LEYL 469
L+ Y+++G L V + ++ +I++R + + A LE L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 470 HFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMA 526
+ + IIH D+KP N LL +++ L DFG+A L + + + +MA
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG--ESGLVAGGRVGTPHFMA 201
Query: 527 P 527
P
Sbjct: 202 P 202
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 163 MIDHEHRKLRLIDWGLAEF 181
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 163 MIDHEHRKLRLIDWGLAEF 181
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 44/167 (26%)
Query: 368 PQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF--------- 417
P S+R+++ ++ F +G+G FG+VY AR Q A+KV
Sbjct: 2 PLGSKRQWTLED-------FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG 54
Query: 418 -------------HFSCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQ 454
H N + R L+LEY G++ + L + D +
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQR 113
Query: 455 RLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
+ ++ +AL Y H S +IH D+KP N LL N ++DFG
Sbjct: 114 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 163 MIDHEHRKLRLIDWGLAEF 181
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY GSL Y + + + Q L + + YLH + IH +L N L
Sbjct: 95 LVMEYVPLGSLRD--YLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVL 149
Query: 489 LDDNIVAHLSDFGIAK 504
LD++ + + DFG+AK
Sbjct: 150 LDNDRLVKIGDFGLAK 165
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 163 MIDHEHRKLRLIDWGLAEF 181
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPN----VSNMQPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + Q +ASRR +E+ R S+
Sbjct: 24 QFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREV---------------SI 68
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L I H N L+LE + G L L + L + + +
Sbjct: 69 LRQVLHPN----IITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQ 123
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNI-VAHLS--DFGIA 503
+ + YLH + I H DLKP N LLD NI + H+ DFG+A
Sbjct: 124 ILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 109 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 161
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 162 MIDHEHRKLRLIDWGLAEF 180
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 163 MIDHEHRKLRLIDWGLAEF 181
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 163 MIDHEHRKLRLIDWGLAEF 181
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 44/167 (26%)
Query: 368 PQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF--------- 417
P S+R+++ ++ F +G+G FG+VY AR Q A+KV
Sbjct: 2 PLGSKRQWTLED-------FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAG 54
Query: 418 -------------HFSCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQ 454
H N + R L+LEY G++ + L + D +
Sbjct: 55 VEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR-FDEQR 113
Query: 455 RLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
+ ++ +AL Y H S +IH D+KP N LL N ++DFG
Sbjct: 114 TATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 40/204 (19%)
Query: 353 CQKRATKLPNVSNMQPQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEF 412
CQK + +P +S+ +PQ + ++ E+ R + +G G FG V+ A +
Sbjct: 162 CQKLS--VPCMSS-KPQKPWEKDAW-EIPR--ESLKLEKKLGAGQFGEVWMATYNKHTKV 215
Query: 413 AIKVFHF-SCSNEDFRA--------------------------LVLEYTTNGSLEKVLYS 445
A+K S S E F A ++ E+ GSL L S
Sbjct: 216 AVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKS 275
Query: 446 SNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
Q L +ID ++ + E + F IH DL+ N L+ ++V ++DFG+A+
Sbjct: 276 DE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 332
Query: 505 LLTGEDQSMTQTQTLAI-IGYMAP 527
++ ED T + I + AP
Sbjct: 333 VI--EDNEYTAREGAKFPIKWTAP 354
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 109 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 161
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 162 MIDHEHRKLRLIDWGLAEF 180
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 163 MIDHEHRKLRLIDWGLAEF 181
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNI---MIDVTSALEYLHFGYSTPIIHCDLKP 484
ALV EY N K LY IL +I M ++ AL+Y H S I+H D+KP
Sbjct: 111 ALVFEYINNTDF-KQLYQ------ILTDFDIRFYMYELLKALDYCH---SKGIMHRDVKP 160
Query: 485 HNKLLDDNIVA-HLSDFGIAKL 505
HN ++D L D+G+A+
Sbjct: 161 HNVMIDHQQKKLRLIDWGLAEF 182
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNI---MIDVTSALEYLHFGYSTPIIHCDLKP 484
ALV EY N K LY IL +I M ++ AL+Y H S I+H D+KP
Sbjct: 116 ALVFEYINNTDF-KQLYQ------ILTDFDIRFYMYELLKALDYCH---SKGIMHRDVKP 165
Query: 485 HNKLLDDNIVA-HLSDFGIAKL 505
HN ++D L D+G+A+
Sbjct: 166 HNVMIDHQQKKLRLIDWGLAEF 187
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N L++ + DFG+A++ E D + T+
Sbjct: 150 LYQILRGLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTE 206
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 207 XVATRWYRAP 216
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 108 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 160
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 161 MIDHEHRKLRLIDWGLAEF 179
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 48/118 (40%), Gaps = 10/118 (8%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG------- 472
+C++ ++ EY G L L + +L+ I S + LHF
Sbjct: 118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGM 177
Query: 473 ---YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IH D+ N LL + VA + DFG+A+ + + + + + +MAP
Sbjct: 178 AFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 235
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL---------YSSNYILDILQRLN------IMIDVTS 464
+C+ + +++EY + G+L + L YS N + ++L+ V
Sbjct: 94 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR 153
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ ++ V ++DFG+A+ + D T + +
Sbjct: 154 GMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW 210
Query: 525 MAP 527
MAP
Sbjct: 211 MAP 213
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL---------YSSNYILDILQRLN------IMIDVTS 464
+C+ + +++EY + G+L + L YS N + ++L+ V
Sbjct: 102 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR 161
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ ++ V ++DFG+A+ + D T + +
Sbjct: 162 GMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW 218
Query: 525 MAP 527
MAP
Sbjct: 219 MAP 221
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+EY G L + +Y L L + M + + ++H Y I+H DLKP N L
Sbjct: 163 LVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENIL 219
Query: 489 LDDNIVAHLS--DFGIAK 504
+ + DFG+A+
Sbjct: 220 CVNRDAKQIKIIDFGLAR 237
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 60/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++E+ GSL + L +D ++ L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 137
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH DL N L+++ + DFG+ K+L + +
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL---------YSSNYILDILQRLN------IMIDVTS 464
+C+ + +++EY + G+L + L YS N + ++L+ V
Sbjct: 91 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR 150
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ ++ V ++DFG+A+ + D T + +
Sbjct: 151 GMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW 207
Query: 525 MAP 527
MAP
Sbjct: 208 MAP 210
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL---------YSSNYILDILQRLN------IMIDVTS 464
+C+ + +++EY + G+L + L YS N + ++L+ V
Sbjct: 102 ACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR 161
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ ++ V ++DFG+A+ + D T + +
Sbjct: 162 GMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW 218
Query: 525 MAP 527
MAP
Sbjct: 219 MAP 221
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N K LY + DI R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDF-KQLYQTLTDYDI--RF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 163 MIDHEHRKLRLIDWGLAEF 181
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
H S S E L+ + T G L + + + Y + I + + L G
Sbjct: 86 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG---- 141
Query: 477 IIHCDLKPHNKLLDDNI---VAHLSDFGIAKLLTGEDQS 512
++H DLKP N LL + L+DFG+A + GE Q+
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 180
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGN---ELEGSIPNVLCHLAVLFQLDLRGNKL 200
+I + K N + ++T L + LS G +EG + +L L L+L+ N++
Sbjct: 21 AIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIEG-----VQYLNNLIGLELKDNQI 75
Query: 201 SGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLF--VGPLPSKIGNL 258
+ P NLT + L L N L ++ S + L+ I LD S V PL + + NL
Sbjct: 76 TDLAP--LKNLTKITELELSGNPLKNV-SAIAGLQSIKTLDLTSTQITDVTPL-AGLSNL 131
Query: 259 KVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300
+VL +D N + +I + + GL +LQ+LS+G+ ++ P
Sbjct: 132 QVL-YLDL---NQITNI-SPLAGLTNLQYLSIGNAQVSDLTP 168
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 9/116 (7%)
Query: 186 HLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSN 245
+L L L+L+ N+++ P NLT + L L N L ++ S + L+ I LD S
Sbjct: 67 YLNNLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV-SAIAGLQSIKTLDLTST 123
Query: 246 LFVGPLP-SKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300
P + + NL+VL +D N + +I + + GL +LQ+LS+G+N++ P
Sbjct: 124 QITDVTPLAGLSNLQVL-YLDL---NQITNI-SPLAGLTNLQYLSIGNNQVNDLTP 174
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 191
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 192 TPCYTPY---YVAP 202
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL---------YSSNYILDILQRLN------IMIDVTS 464
+C+ + +++EY + G+L + L YS N + ++L+ V
Sbjct: 95 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVAR 154
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ ++ V ++DFG+A+ + D T + +
Sbjct: 155 GMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW 211
Query: 525 MAP 527
MAP
Sbjct: 212 MAP 214
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSM 513
IM D+ +A+++LH S I H D+KP N L + + V L+DFG AK T Q+
Sbjct: 132 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNA 185
Query: 514 TQTQTLAIIGYMAP 527
QT Y+AP
Sbjct: 186 LQTPCYTPY-YVAP 198
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 183
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 184 TPCYTPY---YVAP 194
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSM 513
IM D+ +A+++LH S I H D+KP N L + + V L+DFG AK T Q+
Sbjct: 113 EIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT---QNA 166
Query: 514 TQTQTLAIIGYMAP 527
QT Y+AP
Sbjct: 167 LQTPCYTPY-YVAP 179
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 58/187 (31%)
Query: 393 IGRGSFGSVYKARL------QDGMEFAIKVFHFSC--SNEDFRA---------------- 428
+G G+FG V+ A QD M A+K + + +DF+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 429 -----------LVLEYTTNGSLEKVLYSSNYILDIL--------------QRLNIMIDVT 463
+V EY +G L + L S +L Q L + V
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 464 SALEYL---HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+ + YL HF +H DL N L+ +V + DFG+++ + D +T+
Sbjct: 169 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 222
Query: 521 IIGYMAP 527
I +M P
Sbjct: 223 PIRWMPP 229
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 182
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 183 TPCYTPY---YVAP 193
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 51/121 (42%), Gaps = 31/121 (25%)
Query: 175 ELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNL 234
EL + L HL VL+ L N L+ P F +LTALR L L+SN LT +
Sbjct: 470 ELCWDVFEGLSHLQVLY---LNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSH----- 521
Query: 235 KDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNR 294
LP+ NL++L D SRN LL P SL L + HN+
Sbjct: 522 --------------NDLPA---NLEIL---DISRNQLLAPNPDV---FVSLSVLDITHNK 558
Query: 295 L 295
Sbjct: 559 F 559
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 222 TPCYTPY---YVAP 232
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 36/165 (21%)
Query: 372 RRRFSYQELLRATDGFSANNLIGR---GSFGSVYKARLQD-GMEFAIKVFHFSCSNE--D 425
R+ Y+ + R D ++G G+FG VYKA+ ++ G A KV E D
Sbjct: 3 RKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED 62
Query: 426 FRA---------------------------LVLEYTTNGSLEKVLYSSNYILDILQRLNI 458
+ +++E+ G+++ ++ + L Q I
Sbjct: 63 YIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---I 119
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIA 503
+ LE L+F +S IIH DLK N L+ L+DFG++
Sbjct: 120 QVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 176
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 177 TPCYTPY---YVAP 187
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 181
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 182 TPCYTPY---YVAP 192
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
L+LEY + G L L ++ + +++ AL +LH II+ DLKP N +
Sbjct: 98 LILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGHLH---QKGIIYRDLKPENIM 153
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
L+ L+DFG+ K + D ++T I YMAP
Sbjct: 154 LNHQGHVKLTDFGLCK-ESIHDGTVTHX-FCGTIEYMAP 190
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 65/158 (41%), Gaps = 35/158 (22%)
Query: 384 TDGFSANNLIGRGSFGSVYKARLQDGM--EFAIKVFHFSCSNEDFR-ALVLEYTTNG--- 437
TDG+ IG GS+ SV K + EFA+K+ S + ++L Y +
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNII 79
Query: 438 SLEKVLYSSNYI------------LDILQRLN---------IMIDVTSALEYLHFGYSTP 476
+L+ V Y+ LD + R ++ +T +EYLH +
Sbjct: 80 TLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH---AQG 136
Query: 477 IIHCDLKPHNKLLDDNI----VAHLSDFGIAKLLTGED 510
++H DLKP N L D + DFG AK L E+
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN 174
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 178 TPCYTPY---YVAP 188
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+EY G E + + Q + LEYLH S I+H D+KP N L
Sbjct: 85 MVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLL 141
Query: 489 LDDNIVAHLSDFGIAKLL 506
L +S G+A+ L
Sbjct: 142 LTTGGTLKISALGVAEAL 159
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 175
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 176 TPCYTPY---YVAP 186
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 227
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 228 TPCYTPY---YVAP 238
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 27/146 (18%)
Query: 157 SITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPT-CFGNLTALR 215
S+ G Q L N++ P V L L +L L N+L G++P F +LT L
Sbjct: 33 SVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLT 91
Query: 216 NLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDI 275
L L +N+LT +PS +++ ++ +LK L F N L ++
Sbjct: 92 VLDLGTNQLTVLPSAVFD--------------------RLVHLKEL----FMCCNKLTEL 127
Query: 276 PTTIQGLKSLQFLSLGHNRLQGSIPN 301
P I+ L L L+L N+L+ SIP+
Sbjct: 128 PRGIERLTHLTHLALDQNQLK-SIPH 152
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 177
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 178 TPCYTPY---YVAP 188
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 49/160 (30%)
Query: 384 TDGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKV-------------------------- 416
+D + +G+G+F V + G+EFA K+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 417 -----FHFSCSNEDFRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSAL 466
H S E F LV + T G L + YS +Q++ L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI---------L 115
Query: 467 EYLHFGYSTPIIHCDLKPHNKLLDDN---IVAHLSDFGIA 503
E + + +S I+H +LKP N LL L+DFG+A
Sbjct: 116 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 49/160 (30%)
Query: 384 TDGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKV-------------------------- 416
+D + +G+G+F V + G+EFA K+
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 417 -----FHFSCSNEDFRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSAL 466
H S E F LV + T G L + YS +Q++ L
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI---------L 114
Query: 467 EYLHFGYSTPIIHCDLKPHNKLLDDN---IVAHLSDFGIA 503
E + + +S I+H +LKP N LL L+DFG+A
Sbjct: 115 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 154
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 49/160 (30%)
Query: 384 TDGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKV-------------------------- 416
+D + +G+G+F V + G+EFA K+
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 417 -----FHFSCSNEDFRALVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSAL 466
H S E F LV + T G L + YS +Q++ L
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI---------L 115
Query: 467 EYLHFGYSTPIIHCDLKPHNKLLDDN---IVAHLSDFGIA 503
E + + +S I+H +LKP N LL L+DFG+A
Sbjct: 116 ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA 155
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L + LD+ + +++AL YL S +H D+ N L
Sbjct: 87 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 143
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ L DFG+++ + ED + + + I +MAP
Sbjct: 144 VSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 181
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 65/157 (41%), Gaps = 38/157 (24%)
Query: 381 LRATDGFSANNLIGRGSFGSVY-KARLQDGMEFAIKV---------FHFS---------- 420
LR + + IG GSFG +Y A + G E AIK+ H
Sbjct: 5 LRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGG 64
Query: 421 --------CSNE-DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
C E D+ +V+E SLE + + + L + + S +EY+H
Sbjct: 65 VGIPSIKWCGAEGDYNVMVME-LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH- 122
Query: 472 GYSTPIIHCDLKPHNKLL----DDNIVAHLSDFGIAK 504
S IH D+KP N L+ N+V ++ DFG+AK
Sbjct: 123 --SKNFIHRDVKPDNFLMGLGKKGNLV-YIIDFGLAK 156
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 56/150 (37%), Gaps = 37/150 (24%)
Query: 385 DGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HFSC 421
D F +G+G FG+VY AR Q+ A+KV H
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 422 SN--------EDFRA--LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
N D + L+LE+ G L K L D + M ++ AL Y H
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR-FDEQRSATFMEELADALHYCH- 131
Query: 472 GYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
+IH D+KP N L+ ++DFG
Sbjct: 132 --ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 58/187 (31%)
Query: 393 IGRGSFGSVYKARL------QDGMEFAIKVFHFSC--SNEDFRA---------------- 428
+G G+FG V+ A QD M A+K + + +DF+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 429 -----------LVLEYTTNGSLEKVLYSSNYILDIL--------------QRLNIMIDVT 463
+V EY +G L + L S +L Q L + V
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 464 SALEYL---HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+ + YL HF +H DL N L+ +V + DFG+++ + D +T+
Sbjct: 140 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 193
Query: 521 IIGYMAP 527
I +M P
Sbjct: 194 PIRWMPP 200
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 40/182 (21%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFR-ALVLEYTTNGSLE 440
AT + IG G++G+VYKAR G A+K E + V E LE
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 441 KVLYSSNY-ILDILQ--RLNIMIDVTSALEY----------------------------- 468
+ + ++D+ R + I VT E+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 469 ---LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
L F ++ I+H DLKP N L+ L+DFG+A++ + + M + + Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALAPVVVTLWYR 178
Query: 526 AP 527
AP
Sbjct: 179 AP 180
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+E G L K L + + ++ V+ ++YL +H +L N L
Sbjct: 412 LVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVL 468
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMT 514
L + A +SDFG++K L +D T
Sbjct: 469 LVNRHYAKISDFGLSKALGADDSYYT 494
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV E GS+ ++ + + L+ ++ DV SAL++LH + I H DLKP N L
Sbjct: 88 LVFEKMRGGSILSHIHKRRH-FNELEASVVVQDVASALDFLH---NKGIAHRDLKPENIL 143
Query: 489 LDD-NIVA--HLSDFGIAK--LLTGEDQSMTQTQTLAIIG---YMAP 527
+ N V+ + DFG+ L G+ ++ + L G YMAP
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 69/178 (38%), Gaps = 41/178 (23%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 124
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
H S +IH D+KP N LL ++DFG + S +T+ + Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTELCGTLDYLPP 175
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 479 HCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ-TQTLAIIGYMAP 527
H D+KP N L+ + A+L DFGIA T D+ +TQ T+ + Y AP
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATT--DEKLTQLGNTVGTLYYXAP 204
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV EY + G + L + + R + SA++Y H + I+H DLK N L
Sbjct: 90 LVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 489 LDDNIVAHLSDFGIAKLLT 507
LD + ++DFG + T
Sbjct: 146 LDADXNIKIADFGFSNEFT 164
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 42/166 (25%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKARLQDGME-FAIKVFHFSCSNE-DFRALVLEYTTNGS 438
++ D + +LIGRGS+G VY A ++ + AIK + + D + ++ E T
Sbjct: 24 VKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 439 LEKVLYSSNYIL---------DILQ--RLNIMIDVT-SALEYL----------------- 469
L+ S+YI+ D+L+ L I++++ S L+ L
Sbjct: 84 LK-----SDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILY 138
Query: 470 ------HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
F + + IIH DLKP N LL+ + + DFG+A+ + +
Sbjct: 139 NLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSD 184
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 68/187 (36%), Gaps = 58/187 (31%)
Query: 393 IGRGSFGSVYKARL------QDGMEFAIKVFHFSC--SNEDFRA---------------- 428
+G G+FG V+ A QD M A+K + + +DF+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 429 -----------LVLEYTTNGSLEKVLYSSNYILDIL--------------QRLNIMIDVT 463
+V EY +G L + L S +L Q L + V
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 464 SALEYL---HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA 520
+ + YL HF +H DL N L+ +V + DFG+++ + D +T+
Sbjct: 146 AGMVYLAGLHF------VHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTML 199
Query: 521 IIGYMAP 527
I +M P
Sbjct: 200 PIRWMPP 206
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
IM + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN--- 172
Query: 514 TQTQTLAIIGYMAP 527
+ T+ Y+AP
Sbjct: 173 SLTEPCYTPYYVAP 186
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 414 IKVFHFSCSNEDFRALVLEYTTNGS-LEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG 472
+ VF + S EDF + L T G+ L ++ S + +Q L + + L+Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFL--VYQLLRGLKYIH-- 148
Query: 473 YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IIH DLKP N ++++ + DFG+A+ D+ M T +A Y AP
Sbjct: 149 -SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRWYRAP 197
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
L LEY + G L +++ QR + + + YLH I H D+KP N
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENL 135
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
L LEY + G L +++ QR + + + YLH I H D+KP N
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENL 136
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 40/170 (23%)
Query: 392 LIGRGSFGSVYKARLQ-DGMEFAIKVFH-FSCSNEDFRAL-------------------- 429
++G+GSFG V K + + E+A+KV + S N+D +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 430 VLEYTTNGSLEKVLYSSNYILD-ILQR--------LNIMIDVTSALEYLHFGYSTPIIHC 480
+LE +++ + LY+ + D I++R I+ V S + Y+H I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHR 145
Query: 481 DLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DLKP N LL + + + DFG++ Q+ + Y+AP
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYIAP 192
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 66/164 (40%), Gaps = 34/164 (20%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHF-SCSNEDFRA----------------------- 428
+G G FG V+ A + A+K S S E F A
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKE 82
Query: 429 ---LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKP 484
++ E+ GSL L S Q L +ID ++ + E + F IH DL+
Sbjct: 83 PIYIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRA 139
Query: 485 HNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
N L+ ++V ++DFG+A+++ ED T + I + AP
Sbjct: 140 ANILVSASLVCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP 181
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV+E G L + + + + + IM + SA+ ++H ++H DLKP N L
Sbjct: 83 LVMELLNGGELFERIKKKKHFSET-EASYIMRKLVSAVSHMH---DVGVVHRDLKPENLL 138
Query: 489 L---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+DN+ + DFG A+L ++Q + + Y AP
Sbjct: 139 FTDENDNLEIKIIDFGFARLKPPDNQPL--KTPCFTLHYAAP 178
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 28/140 (20%)
Query: 393 IGRGSFGSVYKARLQDGMEF-AIKVFHFSCSNEDFRALVL---------EYTTNGSLEKV 442
IG G++G+V+KA+ ++ E A+K +E + L ++ L V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 443 LYSSNYILDIL----QRLNIMIDVTSA--------------LEYLHFGYSTPIIHCDLKP 484
L+S + + Q L D + L+ L F +S ++H DLKP
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKP 129
Query: 485 HNKLLDDNIVAHLSDFGIAK 504
N L++ N L+DFG+A+
Sbjct: 130 QNLLINRNGELKLADFGLAR 149
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 81/202 (40%), Gaps = 32/202 (15%)
Query: 99 SRNPLDGFLPRVVGNFSQSLEFI------WMSDCNISGGISEEIGNLTDLISIDLGGNKL 152
S N L+ F R+ +Q+ E++ W+ + I S + L +DLG K
Sbjct: 84 SLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR 143
Query: 153 NGSIS-ITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNL 211
IS L L++L+ L+ IPN L L L +L+L GN+L P F L
Sbjct: 144 LEYISEAAFEGLVNLRYLNLGMCNLK-DIPN-LTALVRLEELELSGNRLDLIRPGSFQGL 201
Query: 212 TALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNL 271
T+LR L L ++ +I + +LK L ++ S NNL
Sbjct: 202 TSLRKLWLMHAQVATIER-----------------------NAFDDLKSLEELNLSHNNL 238
Query: 272 LGDIPTTIQGLKSLQFLSLGHN 293
+ L L+ + L HN
Sbjct: 239 MSLPHDLFTPLHRLERVHLNHN 260
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 51/234 (21%)
Query: 32 LVGIVSITIFN----LSTLKVFDVDNNYVLGRLSSI----------VDELSLSDNYLTSS 77
LV + + FN L+TL++FD RL+++ + EL L +N + S
Sbjct: 70 LVRKIEVGAFNGLPSLNTLELFD-------NRLTTVPTQAFEYLSKLRELWLRNNPI-ES 121
Query: 78 TPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIG 137
P +F + L++LD+ ++ +L ++ + CN+ ++I
Sbjct: 122 IPSYAF----NRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL-----KDIP 172
Query: 138 NLTDLI---SIDLGGNKLN----GSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVL 190
NLT L+ ++L GN+L+ GS L L+KL + + +E N L L
Sbjct: 173 NLTALVRLEELELSGNRLDLIRPGSFQ-GLTSLRKLWLMHAQVATIER---NAFDDLKSL 228
Query: 191 FQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLK-DILYLDFW 243
+L+L N L F L L +HL+ N W+ D+L+L +W
Sbjct: 229 EELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP--------WHCNCDVLWLSWW 274
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 75/174 (43%), Gaps = 28/174 (16%)
Query: 145 IDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSI 204
++L N + + T L+ L+ L N + L L L+L N+L+ ++
Sbjct: 40 LNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT-TV 98
Query: 205 PT-CFGNLTALRNLHLDSNELTSIPSILWN---------LKDILYLDFWS---------- 244
PT F L+ LR L L +N + SIPS +N L ++ L++ S
Sbjct: 99 PTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNL 158
Query: 245 ---NLFVGPLPSKIGNLKVLTR---IDFSRNNLLGDIPTTIQGLKSLQFLSLGH 292
NL + L I NL L R ++ S N L P + QGL SL+ L L H
Sbjct: 159 RYLNLGMCNL-KDIPNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 211
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
FH ++DF +VLE SL ++ + + R M ++YLH +
Sbjct: 91 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNR 146
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIA 503
+IH DLK N L+D++ + DFG+A
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLA 173
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 29/133 (21%)
Query: 395 RGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQ 454
+G+ +AR GME++ + F+ LV S Y L
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV--------------SCTYQL---- 166
Query: 455 RLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514
+EYL S IH DL N L+ +N V ++DFG+A+ + D
Sbjct: 167 --------ARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 515 QTQTLAIIGYMAP 527
T + +MAP
Sbjct: 216 TTNGRLPVKWMAP 228
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 40/170 (23%)
Query: 392 LIGRGSFGSVYKARLQ-DGMEFAIKVFH-FSCSNEDFRAL-------------------- 429
++G+GSFG V K + + E+A+KV + S N+D +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 430 VLEYTTNGSLEKVLYSSNYILD-ILQR--------LNIMIDVTSALEYLHFGYSTPIIHC 480
+LE +++ + LY+ + D I++R I+ V S + Y+H I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHR 145
Query: 481 DLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DLKP N LL + + + DFG++ T Q+ + Y+AP
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAP 192
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 29/133 (21%)
Query: 395 RGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQ 454
+G+ +AR GME++ + F+ LV S Y L
Sbjct: 125 KGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV--------------SCTYQL---- 166
Query: 455 RLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514
+EYL S IH DL N L+ +N V ++DFG+A+ + D
Sbjct: 167 --------ARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 515 QTQTLAIIGYMAP 527
T + +MAP
Sbjct: 216 TTNGRLPVKWMAP 228
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
LV E+ G L E+++ + + D NIM + S + YLH I+H D+KP N
Sbjct: 123 LVTEFYEGGELFEQII--NRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENI 177
Query: 488 LLDDN---IVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LL++ + + DFG++ + + L Y+AP
Sbjct: 178 LLENKNSLLNIKIVDFGLSSFFS---KDYKLRDRLGTAYYIAP 217
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 191 YVATRWYRAP 200
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 191 YVATRWYRAP 200
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 40/170 (23%)
Query: 392 LIGRGSFGSVYKARLQ-DGMEFAIKVFH-FSCSNEDFRAL-------------------- 429
++G+GSFG V K + + E+A+KV + S N+D +
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 430 VLEYTTNGSLEKVLYSSNYILD-ILQR--------LNIMIDVTSALEYLHFGYSTPIIHC 480
+LE +++ + LY+ + D I++R I+ V S + Y+H I+H
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHR 145
Query: 481 DLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DLKP N LL + + + DFG++ T Q+ + Y+AP
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMKDRIGTAYYIAP 192
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 14/94 (14%)
Query: 416 VFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYST 475
V H + +V+EY SL++ S L + + + ++++ AL YLH S
Sbjct: 148 VEHTDRHGDPVGYIVMEYVGGQSLKR---SKGQKLPVAEAIAYLLEILPALSYLH---SI 201
Query: 476 PIIHCDLKPHN--------KLLDDNIVAHLSDFG 501
+++ DLKP N KL+D V+ ++ FG
Sbjct: 202 GLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFG 235
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 128 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 185 YVATRWYRAP 194
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
L LEY + G L +++ QR + + + YLH I H D+KP N
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENL 136
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
L LEY + G L +++ QR + + + YLH I H D+KP N
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENL 136
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 191 YVATRWYRAP 200
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
L LEY + G L +++ QR + + + YLH I H D+KP N
Sbjct: 82 LFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENL 136
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 128 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 184
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 185 YVATRWYRAP 194
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 138 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 194
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 195 YVATRWYRAP 204
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 130 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 187 YVATRWYRAP 196
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 130 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 186
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 187 YVATRWYRAP 196
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 135 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 191
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 192 YVATRWYRAP 201
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 132 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 189 YVATRWYRAP 198
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 70/169 (41%), Gaps = 39/169 (23%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFRALVLEY-----TTNGSLEKVLYSS 446
+GRG++G V K R + G A+K + ++++ + L+++ T + Y +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGA 74
Query: 447 NY----------------------ILDILQRL------NIMIDVTSALEYLHFGYSTPII 478
+ ++D Q + I + + ALE+LH S +I
Sbjct: 75 LFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VI 132
Query: 479 HCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
H D+KP N L++ + DFGI+ L + + + YMAP
Sbjct: 133 HRDVKPSNVLINALGQVKMCDFGISGYLVDD---VAKDIDAGCKPYMAP 178
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 136 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 192
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 193 YVATRWYRAP 202
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 127 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 183
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 184 YVATRWYRAP 193
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 190
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 191 YVATRWYRAP 200
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 130 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTE 186
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 187 YVATRWYRAP 196
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 191 YVATRWYRAP 200
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 150 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 206
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 207 YVATRWYRAP 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 130 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 187 YVATRWYRAP 196
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 130 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 187 YVATRWYRAP 196
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 132 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTE 188
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 189 YVATRWYRAP 198
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.0 bits (79), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL---------YSSNYILDILQRLN------IMIDVTS 464
+C+ + +++EY + G+L + L +S N + ++L+ V
Sbjct: 102 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVAR 161
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ ++ V ++DFG+A+ + D T + +
Sbjct: 162 GMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKW 218
Query: 525 MAP 527
MAP
Sbjct: 219 MAP 221
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
L LEY + G L +++ QR + + + YLH I H D+KP N
Sbjct: 81 LFLEYCSGGELFDRIEPDIGMPEPDAQRF--FHQLMAGVVYLH---GIGITHRDIKPENL 135
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
FH ++DF +VLE SL ++ + + R M ++YLH +
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNR 162
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIA 503
+IH DLK N L+D++ + DFG+A
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 47/171 (27%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIK-----VFHF----SCSNEDFRALV------------ 430
+GRGSFG V++ + Q G + A+K VF +C+ +V
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWV 125
Query: 431 ---LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+E GSL +++ + L + + ALE L + ++ I+H D+K N
Sbjct: 126 NIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 181
Query: 488 LL-DDNIVAHLSDFGIA----------KLLTGEDQSMTQTQTLAIIGYMAP 527
LL D A L DFG A LLTG+ T+T +MAP
Sbjct: 182 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-------HMAP 225
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 39/155 (25%)
Query: 393 IGRGSFGSVYKAR---LQD--GMEFAIKVFHFSCSNE--DFR------------------ 427
+G+G+FGSV R LQD G A+K S DF
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 428 -----------ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
L++EY GSL L +D ++ L + +EYL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKR 135
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511
IH +L N L+++ + DFG+ K+L + +
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKE 170
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 39/160 (24%)
Query: 384 TDGFSANNLIGRGSFGS----VYKARLQDGMEFAIKVFHFSCSNEDFR-ALVLEYTTNGS 438
+DG+ IG GS+ V+KA ME+A+KV S + ++L Y + +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKA---TNMEYAVKVIDKSKRDPSEEIEILLRYGQHPN 82
Query: 439 L--EKVLYSSN---YILDILQRLNIMID-------------------VTSALEYLHFGYS 474
+ K +Y Y++ L R ++D + +EYLH S
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH---S 139
Query: 475 TPIIHCDLKPHNKLLDDNI----VAHLSDFGIAKLLTGED 510
++H DLKP N L D + DFG AK L E+
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
FH ++DF +VLE SL ++ + + R M ++YLH +
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNR 162
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIA 503
+IH DLK N L+D++ + DFG+A
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 150 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTE 206
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 207 YVATRWYRAP 216
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 406 LQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSA 465
LQ+ + +S D V+EY G L L + R ++ SA
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSA 260
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
L+YLH +++ DLK N +LD + ++DFG+ K G T Y+
Sbjct: 261 LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYL 316
Query: 526 AP 527
AP
Sbjct: 317 AP 318
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
FH ++DF +VLE SL ++ + + R M ++YLH +
Sbjct: 107 FHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARY-FMRQTIQGVQYLH---NNR 162
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIA 503
+IH DLK N L+D++ + DFG+A
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLA 189
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 40/182 (21%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFR-ALVLEYTTNGSLE 440
AT + IG G++G+VYKAR G A+K E + V E LE
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 441 KVLYSSNY-ILDILQ--RLNIMIDVTSALEY----------------------------- 468
+ + ++D+ R + I VT E+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 469 ---LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
L F ++ I+H DLKP N L+ L+DFG+A++ + + M + + Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALDPVVVTLWYR 178
Query: 526 AP 527
AP
Sbjct: 179 AP 180
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 415 KVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS 474
+V++F + + A+VLE SLE + + + L I I + S +EY+H S
Sbjct: 61 QVYYFGPXGK-YNAMVLE-LLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVH---S 115
Query: 475 TPIIHCDLKPHNKLL-----DDNIVAHLSDFGIAK 504
+I+ D+KP N L+ V H+ DFG+AK
Sbjct: 116 KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 46/100 (46%), Gaps = 6/100 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+++E T G L L + LD+ + +++AL YL S +H D+ N L
Sbjct: 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVL 523
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
+ L DFG+++ + ED + + + I +MAP
Sbjct: 524 VSATDCVKLGDFGLSRYM--EDSTYYKASKGKLPIKWMAP 561
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 118 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.0 bits (79), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 119 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 468 YLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
YLH I H D+KP N LLD+ +SDFG+A + ++ + + Y+AP
Sbjct: 120 YLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 68/175 (38%), Gaps = 55/175 (31%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFRA----------------------- 428
+GRGSFG V++ Q G + A+K E FRA
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRL----EVFRAEELMACAGLTSPRIVPLYGAVRE 156
Query: 429 -----LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLK 483
+ +E GSL +++ + + + L + LEYLH S I+H D+K
Sbjct: 157 GPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHGDVK 212
Query: 484 PHNKLL-DDNIVAHLSDFGIA----------KLLTGEDQSMTQTQTLAIIGYMAP 527
N LL D A L DFG A LLTG+ T+T +MAP
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET-------HMAP 260
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 406 LQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSA 465
LQ+ + +S D V+EY G L L + R ++ SA
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSA 263
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
L+YLH +++ DLK N +LD + ++DFG+ K G T Y+
Sbjct: 264 LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKTFCGTPEYL 319
Query: 526 AP 527
AP
Sbjct: 320 AP 321
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 42/169 (24%)
Query: 381 LRATDGFSANNLIGRGSFGSVYKARLQDGME-FAIKVFHFSCSNE-DFRALVLEYTTNGS 438
+ D + +LIGRGS+G VY A ++ + AIK + + D + ++ E T
Sbjct: 22 VHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNR 81
Query: 439 LEKVLYSSNYIL---------DILQ--RLNIMIDVT-SALEYL----------------- 469
L+ S+YI+ D+L+ L I++++ S L+ L
Sbjct: 82 LK-----SDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILY 136
Query: 470 ------HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS 512
+F + + IIH DLKP N LL+ + + DFG+A+ + E +
Sbjct: 137 NLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDT 185
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 47/171 (27%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIK-----VFHF----SCSNEDFRALV------------ 430
+GRGSFG V++ + Q G + A+K VF +C+ +V
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWV 141
Query: 431 ---LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+E GSL +++ + L + + ALE L + ++ I+H D+K N
Sbjct: 142 NIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 197
Query: 488 LL-DDNIVAHLSDFGIA----------KLLTGEDQSMTQTQTLAIIGYMAP 527
LL D A L DFG A LLTG+ T+T +MAP
Sbjct: 198 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-------HMAP 241
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 124
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 128
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 129 H---SKRVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 406 LQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSA 465
LQ+ + +S D V+EY G L L + R ++ SA
Sbjct: 62 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSA 120
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
L+YLH +++ DLK N +LD + ++DFG+ K G T Y+
Sbjct: 121 LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYL 176
Query: 526 AP 527
AP
Sbjct: 177 AP 178
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 39/160 (24%)
Query: 384 TDGFSANNLIGRGSFGS----VYKARLQDGMEFAIKVFHFSCSNEDFR-ALVLEYTTNGS 438
+DG+ IG GS+ V+KA ME+A+KV S + ++L Y + +
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKAT---NMEYAVKVIDKSKRDPSEEIEILLRYGQHPN 82
Query: 439 L--EKVLYSSN---YILDILQRLNIMID-------------------VTSALEYLHFGYS 474
+ K +Y Y++ L R ++D + +EYLH S
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH---S 139
Query: 475 TPIIHCDLKPHNKLLDDNI----VAHLSDFGIAKLLTGED 510
++H DLKP N L D + DFG AK L E+
Sbjct: 140 QGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 124
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 45/156 (28%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQD------------------GMEFAIK--------- 415
A + F +G+G FG+VY AR ++ G+E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 416 ----------VFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSA 465
FH S L+LEY G++ + L + D + + ++ +A
Sbjct: 66 RHPNILRLYGYFHDSTRV----YLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANA 120
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
L Y H S +IH D+KP N LL ++DFG
Sbjct: 121 LSYCH---SKKVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 123
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 124 H---SKRVIHRDIKPENLLLGSAGELKIADFG 152
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 129
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL---------YSSNYILDILQRLN------IMIDVTS 464
+C+ + +++EY + G+L + L Y N + ++L+ V
Sbjct: 87 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVAR 146
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ ++ V ++DFG+A+ + D T + +
Sbjct: 147 GMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW 203
Query: 525 MAP 527
MAP
Sbjct: 204 MAP 206
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 69/182 (37%), Gaps = 40/182 (21%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFR-ALVLEYTTNGSLE 440
AT + IG G++G+VYKAR G A+K E + V E LE
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 441 KVLYSSNY-ILDIL--QRLNIMIDVTSALEY----------------------------- 468
+ + ++D+ R + I VT E+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 469 ---LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
L F ++ I+H DLKP N L+ L+DFG+A++ + + M + + Y
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQ---MALFPVVVTLWYR 178
Query: 526 AP 527
AP
Sbjct: 179 AP 180
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 127
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 124
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 406 LQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSA 465
LQ+ + +S D V+EY G L L + R ++ SA
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSA 122
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
L+YLH +++ DLK N +LD + ++DFG+ K G T Y+
Sbjct: 123 LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYL 178
Query: 526 AP 527
AP
Sbjct: 179 AP 180
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 150
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 151 H---SKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 68/175 (38%), Gaps = 55/175 (31%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFRA----------------------- 428
+GRGSFG V++ Q G + A+K E FRA
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRL----EVFRAEELMACAGLTSPRIVPLYGAVRE 137
Query: 429 -----LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLK 483
+ +E GSL +++ + + + L + LEYLH S I+H D+K
Sbjct: 138 GPWVNIFMELLEGGSLGQLVKEQGCLPED-RALYYLGQALEGLEYLH---SRRILHGDVK 193
Query: 484 PHNKLL-DDNIVAHLSDFGIA----------KLLTGEDQSMTQTQTLAIIGYMAP 527
N LL D A L DFG A LLTG+ T+T +MAP
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET-------HMAP 241
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 125
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 126
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 47/171 (27%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIK-----VFHF----SCSNEDFRALV------------ 430
+GRGSFG V++ + Q G + A+K VF +C+ +V
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWV 139
Query: 431 ---LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
+E GSL +++ + L + + ALE L + ++ I+H D+K N
Sbjct: 140 NIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV 195
Query: 488 LL-DDNIVAHLSDFGIA----------KLLTGEDQSMTQTQTLAIIGYMAP 527
LL D A L DFG A LLTG+ T+T +MAP
Sbjct: 196 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET-------HMAP 239
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487
ALV E+ N +++ + + D R M ++ AL+Y H S I+H D+KPHN
Sbjct: 110 ALVFEHVNNTDFKQLRQT---LTDYDIRF-YMYEILKALDYCH---SMGIMHRDVKPHNV 162
Query: 488 LLD-DNIVAHLSDFGIAKL 505
++D ++ L D+G+A+
Sbjct: 163 MIDHEHRKLRLIDWGLAEF 181
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 5/122 (4%)
Query: 406 LQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSA 465
LQ+ + +S D V+EY G L L + R ++ SA
Sbjct: 63 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSA 121
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
L+YLH +++ DLK N +LD + ++DFG+ K G T Y+
Sbjct: 122 LDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYL 177
Query: 526 AP 527
AP
Sbjct: 178 AP 179
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 26/130 (20%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVLYSSNYI-----------------------LDILQRL 456
+CS + L++EY GSL L S + L + +
Sbjct: 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQT 516
+ ++ ++YL ++H DL N L+ + +SDFG+++ + ED + ++
Sbjct: 154 SFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 517 QTLAIIGYMA 526
Q + +MA
Sbjct: 211 QGRIPVKWMA 220
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + T+
Sbjct: 132 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTE 188
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 189 YVATRWYRAP 198
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 141
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 142 H---SKRVIHRDIKPENLLLGSAGELKIADFG 170
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 37/170 (21%)
Query: 391 NLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRA----------------- 428
++G G FG+V+K + +G + IKV + F+A
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 429 ------------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
LV +Y GSL + L LN + + + YL
Sbjct: 97 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHG 153
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMA 526
++H +L N LL ++DFG+A LL +D+ + ++ I +MA
Sbjct: 154 MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 203
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 127
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 90/227 (39%), Gaps = 44/227 (19%)
Query: 80 ELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNL 139
EL FL + S L+KLD+S NPL F P G + IG L
Sbjct: 164 ELEFLGNSS----LRKLDLSSNPLKEFSP----------------------GCFQTIGKL 197
Query: 140 TDLISIDLGGNKLNGSISITLG---KLQKLQFLSFRGNELEGSIPNVLCHLAV--LFQLD 194
L+ L +LN ++ L +Q LS N+L + + L L QLD
Sbjct: 198 FALL---LNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLD 254
Query: 195 LRGNKLSGSIPTCFGNLTALRNLHLDSNELTSI-PSILWNLKDILYLDF-----WSNLFV 248
L N L F L +LR L L+ N + + P + L ++ YL ++ +
Sbjct: 255 LSYNNLHDVGNGSFSYLPSLRYLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSL 314
Query: 249 GPLPS----KIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLG 291
P+ LK L ++ NN+ T GL SL++LSL
Sbjct: 315 ASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLS 361
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 128/341 (37%), Gaps = 77/341 (22%)
Query: 6 LNNRQLDGGMTGDVCYRICTIDSQN------KLVGI----------VSITIFNLSTLKVF 49
LNN QL+ +T +C+ + QN +L+ ++T +LS +
Sbjct: 202 LNNAQLNPHLTEKLCWELSNTSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLH 261
Query: 50 DVDNNYVLGRLSSI--VDELSLSDNYLTSSTPELSFLSSMSNCKYLK-KLDISRNPLDGF 106
DV N G S + + LSL N + +P SF +SN +YL K ++ +
Sbjct: 262 DVGN----GSFSYLPSLRYLSLEYNNIQRLSPR-SFYG-LSNLRYLSLKRAFTKQSVSLA 315
Query: 107 LPRVVGNFS----QSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGK 162
+ +FS + LE++ M D NI S L L + S+S T
Sbjct: 316 SHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYL---------SLSKTFTS 366
Query: 163 LQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSN 222
LQ L +F L H + L L+L N +S F L LR L L N
Sbjct: 367 LQTLTNETFVS----------LAH-SPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLN 415
Query: 223 E------------LTSIPSILWNLKDILYLDFWSNLFVGPL----------------PSK 254
E L +I I + L L S V L PS
Sbjct: 416 EIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSP 475
Query: 255 IGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRL 295
L+ LT +D S NN+ ++GL++L+ L HN L
Sbjct: 476 FRPLRNLTILDLSNNNIANINEDLLEGLENLEILDFQHNNL 516
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 68/178 (38%), Gaps = 41/178 (23%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 124
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
H S +IH D+KP N LL ++DFG + S +T + Y+ P
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG----WSVHAPSSRRTDLCGTLDYLPP 175
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 125
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 38/172 (22%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRA-----------------LVLEYTT 435
+G+G +G V++ L G A+K+F FR + + T+
Sbjct: 16 VGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTS 74
Query: 436 NGSLEKVLYSSNY-----ILDILQR--------LNIMIDVTSALEYLH---FGYS--TPI 477
S ++ ++Y + D LQR L + + L +LH FG I
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAI 134
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLT-GEDQ-SMTQTQTLAIIGYMAP 527
H D K N L+ N+ ++D G+A + + G D + + YMAP
Sbjct: 135 AHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAP 186
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV +Y GSL + L LN + + + YL ++H +L N L
Sbjct: 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVL 147
Query: 489 LDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMA 526
L ++DFG+A LL +D+ + ++ I +MA
Sbjct: 148 LKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMA 185
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 125
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 126 H---SKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 124
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 127
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 82/202 (40%), Gaps = 32/202 (15%)
Query: 99 SRNPLDGFLPRVVGNFSQSLEFI------WMSDCNISGGISEEIGNLTDLISIDLGGNKL 152
S N L+ F R+ +Q+ E++ W+ + I S + L +DLG K
Sbjct: 84 SLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKR 143
Query: 153 NGSIS-ITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNL 211
IS L L++L+ L+ IPN L L L +L+L GN+L P F L
Sbjct: 144 LEYISEAAFEGLVNLRYLNLGMCNLK-DIPN-LTALVRLEELELSGNRLDLIRPGSFQGL 201
Query: 212 TALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNL 271
T+LR L L ++ +I N F +LK L ++ S NNL
Sbjct: 202 TSLRKLWLMHAQVATIER---------------NAF--------DDLKSLEELNLSHNNL 238
Query: 272 LGDIPTTIQGLKSLQFLSLGHN 293
+ L L+ + L HN
Sbjct: 239 MSLPHDLFTPLHRLERVHLNHN 260
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 100/234 (42%), Gaps = 51/234 (21%)
Query: 32 LVGIVSITIFN----LSTLKVFDVDNNYVLGRLSSI----------VDELSLSDNYLTSS 77
LV + + FN L+TL++FD RL+++ + EL L +N + S
Sbjct: 70 LVRKIEVGAFNGLPSLNTLELFD-------NRLTTVPTQAFEYLSKLRELWLRNNPI-ES 121
Query: 78 TPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIG 137
P +F + L++LD+ ++ +L ++ + CN+ ++I
Sbjct: 122 IPSYAF----NRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL-----KDIP 172
Query: 138 NLTDLI---SIDLGGNKLN----GSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVL 190
NLT L+ ++L GN+L+ GS L L+KL + + +E N L L
Sbjct: 173 NLTALVRLEELELSGNRLDLIRPGSFQ-GLTSLRKLWLMHAQVATIER---NAFDDLKSL 228
Query: 191 FQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLK-DILYLDFW 243
+L+L N L F L L +HL+ N W+ D+L+L +W
Sbjct: 229 EELNLSHNNLMSLPHDLFTPLHRLERVHLNHNP--------WHCNCDVLWLSWW 274
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 69/160 (43%), Gaps = 28/160 (17%)
Query: 159 TLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPT-CFGNLTALRNL 217
T L+ L+ L N + L L L+L N+L+ ++PT F L+ LR L
Sbjct: 54 TFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLT-TVPTQAFEYLSKLREL 112
Query: 218 HLDSNELTSIPSILWN---------LKDILYLDFWS-------------NLFVGPLPSKI 255
L +N + SIPS +N L ++ L++ S NL + L I
Sbjct: 113 WLRNNPIESIPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNL-KDI 171
Query: 256 GNLKVLTR---IDFSRNNLLGDIPTTIQGLKSLQFLSLGH 292
NL L R ++ S N L P + QGL SL+ L L H
Sbjct: 172 PNLTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMH 211
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK-FDEQRTATYITELANALSYC 124
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 125 H---SKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 18/123 (14%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVL---------YSSNYILDILQRLN------IMIDVTS 464
+C+ + +++EY + G+L + L Y N + ++L+ V
Sbjct: 102 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVAR 161
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
+EYL S IH DL N L+ ++ V ++DFG+A+ + D T + +
Sbjct: 162 GMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW 218
Query: 525 MAP 527
MAP
Sbjct: 219 MAP 221
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 129
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 129
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 130 H---SKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 12/107 (11%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
LV E GS+ ++ + + L+ ++ DV SAL++LH + I H DLKP N L
Sbjct: 88 LVFEKMRGGSILSHIHKRRH-FNELEASVVVQDVASALDFLH---NKGIAHRDLKPENIL 143
Query: 489 LDD-NIVAHLS----DFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
+ N V+ + D G L G+ ++ + L G YMAP
Sbjct: 144 CEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAP 190
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA- 520
A++YLH IIH DLKP N LL +++ + ++DFG +K+L GE M +TL
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCG 317
Query: 521 IIGYMAP 527
Y+AP
Sbjct: 318 TPTYLAP 324
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 12/61 (19%)
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLL----------TGEDQSMTQTQTLAIIGYMA 526
+IH DLKP N L++ N + DFG+A+++ TG+ M T+ +A Y A
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM--TEXVATRWYRA 190
Query: 527 P 527
P
Sbjct: 191 P 191
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 26/130 (20%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVLYSSNYI-----------------------LDILQRL 456
+CS + L++EY GSL L S + L + +
Sbjct: 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQT 516
+ ++ ++YL ++H DL N L+ + +SDFG+++ + ED + ++
Sbjct: 154 SFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRS 210
Query: 517 QTLAIIGYMA 526
Q + +MA
Sbjct: 211 QGRIPVKWMA 220
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL +N V + DFG+A+ + + + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 265 LKWMAP 270
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 20/107 (18%)
Query: 429 LVLEYTTNGSL-----EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLK 483
LV++ + G L EK Y+ ++++ V A+ YLH I+H DLK
Sbjct: 97 LVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ------VLDAVYYLH---RMGIVHRDLK 147
Query: 484 PHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
P N L D+ +SDFG++K+ E + + GY+AP
Sbjct: 148 PENLLYYSQDEESKIMISDFGLSKM---EGKGDVMSTACGTPGYVAP 191
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
H S S E L+ + T G L + + + Y + I + + L G
Sbjct: 75 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMG---- 130
Query: 477 IIHCDLKPHNKLLDDNI---VAHLSDFGIAKLLTGEDQS 512
++H +LKP N LL + L+DFG+A + GE Q+
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA 169
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTL-A 520
A++YLH IIH DLKP N LL +++ + ++DFG +K+L GE M +TL
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCG 178
Query: 521 IIGYMAP 527
Y+AP
Sbjct: 179 TPTYLAP 185
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLA- 520
A++YLH IIH DLKP N LL +++ + ++DFG +K+L GE M +TL
Sbjct: 251 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCG 303
Query: 521 IIGYMAP 527
Y+AP
Sbjct: 304 TPTYLAP 310
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 121
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL ++DFG
Sbjct: 122 H---SKRVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTL-A 520
A++YLH IIH DLKP N LL +++ + ++DFG +K+L GE M +TL
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCG 178
Query: 521 IIGYMAP 527
Y+AP
Sbjct: 179 TPTYLAP 185
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTL-A 520
A++YLH IIH DLKP N LL +++ + ++DFG +K+L GE M +TL
Sbjct: 125 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCG 177
Query: 521 IIGYMAP 527
Y+AP
Sbjct: 178 TPTYLAP 184
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 414 IKVFHFSCSNEDFRALVLEYTTNGS-LEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG 472
+ VF + S EDF + L T G+ L ++ + +Q L + + L+Y+H
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFL--VYQLLRGLKYIH-- 140
Query: 473 YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IIH DLKP N ++++ + DFG+A+ D+ M T +A Y AP
Sbjct: 141 -SAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEM--TGYVATRWYRAP 189
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTL-A 520
A++YLH IIH DLKP N LL +++ + ++DFG +K+L GE M +TL
Sbjct: 126 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCG 178
Query: 521 IIGYMAP 527
Y+AP
Sbjct: 179 TPTYLAP 185
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 26/130 (20%)
Query: 420 SCSNEDFRALVLEYTTNGSLEKVLYSSNYI-----------------------LDILQRL 456
+CS + L++EY GSL L S + L + +
Sbjct: 94 ACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLI 153
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQT 516
+ ++ ++YL ++H DL N L+ + +SDFG+++ + ED + ++
Sbjct: 154 SFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRS 210
Query: 517 QTLAIIGYMA 526
Q + +MA
Sbjct: 211 QGRIPVKWMA 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 11/67 (16%)
Query: 465 ALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTL-A 520
A++YLH IIH DLKP N LL +++ + ++DFG +K+L GE M +TL
Sbjct: 132 AVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLM---RTLCG 184
Query: 521 IIGYMAP 527
Y+AP
Sbjct: 185 TPTYLAP 191
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 12/61 (19%)
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLL----------TGEDQSMTQTQTLAIIGYMA 526
+IH DLKP N L++ N + DFG+A+++ TG+ M T+ +A Y A
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM--TEYVATRWYRA 190
Query: 527 P 527
P
Sbjct: 191 P 191
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 9/74 (12%)
Query: 457 NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQSM 513
I + A++YLH S I H D+KP N L N + L+DFG AK T +
Sbjct: 165 EIXKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLT 221
Query: 514 TQTQTLAIIGYMAP 527
T T Y+AP
Sbjct: 222 TPCYTPY---YVAP 232
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 37/181 (20%)
Query: 353 CQKRATKLPNVSNMQPQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEF 412
CQK + +P +S+ +PQ + ++ E+ R + +G G FG V+ A +
Sbjct: 156 CQKLS--VPCMSS-KPQKPWEKDAW-EIPR--ESLKLEKKLGAGQFGEVWMATYNKHTKV 209
Query: 413 AIKVFHF-SCSNEDFRA--------------------------LVLEYTTNGSLEKVLYS 445
A+K S S E F A ++ E+ GSL L S
Sbjct: 210 AVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKS 269
Query: 446 SNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
Q L +ID ++ + E + F IH DL+ N L+ ++V ++DFG+A+
Sbjct: 270 DE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR 326
Query: 505 L 505
+
Sbjct: 327 V 327
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 131 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 526 A 526
A
Sbjct: 188 A 188
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 33/141 (23%)
Query: 393 IGRGSFGSVYKARLQD-GMEFAIKVFHFSCSNE--DFRA--------------------- 428
+G G+FG VYKA+ ++ G A KV E D+
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 429 ------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
+++E+ G+++ ++ + L Q I + LE L+F +S IIH DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ---IQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 483 KPHNKLLDDNIVAHLSDFGIA 503
K N L+ L+DFG++
Sbjct: 136 KAGNVLMTLEGDIRLADFGVS 156
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 526 A 526
A
Sbjct: 187 A 187
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCS--------NEDF 426
+L+ T+ F ++G G+FG+VYK + +G + AIK + S +E +
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 427 -----------RALVLEYTTNGSLEKVLYSSNYILDILQR----------LNIMIDVTSA 465
R L + T+ L L +LD ++ LN + +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 526 A 526
A
Sbjct: 187 A 187
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Query: 424 EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLK 483
E ++L Y +G L + + S + ++ + V +EYL +H DL
Sbjct: 95 EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLA 151
Query: 484 PHNKLLDDNIVAHLSDFGIAK-LLTGEDQSMTQ 515
N +LD++ ++DFG+A+ +L E S+ Q
Sbjct: 152 ARNCMLDESFTVKVADFGLARDILDREYYSVQQ 184
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 38/169 (22%)
Query: 392 LIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------HF----------SC 421
++G+G++G VY R L + + AIK H S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 422 SNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMI-DVTSALEYLHFGYSTPIIH 479
S F + +E GSL +L S + D Q + + L+YLH I+H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 145
Query: 480 CDLKPHNKLLDD-NIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
D+K N L++ + V +SDFG +K L G + T+T T + YMAP
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQYMAP 192
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 414 IKVFHFSCSNEDFRALVLEYTTNGS-LEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG 472
+ VF + S EDF + L T G+ L ++ + +Q L + + L+Y+H
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFL--VYQLLRGLKYIH-- 148
Query: 473 YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IIH DLKP N ++++ + DFG+A+ D+ M T +A Y AP
Sbjct: 149 -SAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRWYRAP 197
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 71/169 (42%), Gaps = 38/169 (22%)
Query: 392 LIGRGSFGSVYKAR-LQDGMEFAIKVF-------------------HF----------SC 421
++G+G++G VY R L + + AIK H S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 422 SNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMI-DVTSALEYLHFGYSTPIIH 479
S F + +E GSL +L S + D Q + + L+YLH I+H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 131
Query: 480 CDLKPHNKLLDD-NIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
D+K N L++ + V +SDFG +K L G + T+T T + YMAP
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-PCTETFT-GTLQYMAP 178
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 449 ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL-T 507
+LD I+ +V LEYLH IH D+K N LL ++ ++DFG++ L T
Sbjct: 117 VLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 173
Query: 508 GEDQSMTQTQTLAIIG---YMAP 527
G D + + + +G +MAP
Sbjct: 174 GGDITRNKVRK-TFVGTPCWMAP 195
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 78/203 (38%), Gaps = 40/203 (19%)
Query: 360 LPNVSNMQPQASRRRFSYQELLR--ATDGFSANNLIGRGSFGSVYKA-RLQDG----MEF 412
+P N+ Q S + Q LLR F ++G G+FG+VYK + +G +
Sbjct: 14 IPTTENLYFQGSGEAPN-QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV 72
Query: 413 AIKVFHFSCSNEDFRALVLEYTTNGSLEKV-------------------LYSSNYILDIL 453
AIK + S + + ++ E S++ L +LD +
Sbjct: 73 AIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYV 132
Query: 454 QR----------LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIA 503
+ LN + + + YL ++H DL N L+ ++DFG+A
Sbjct: 133 REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
Query: 504 KLLTGEDQSMTQTQTLAIIGYMA 526
KLL E++ I +MA
Sbjct: 190 KLLGAEEKEYHAEGGKVPIKWMA 212
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 69/166 (41%), Gaps = 38/166 (22%)
Query: 385 DGFSANNLIGRGSFGSVYKA--RLQD---GMEFAIKVFH--FSCS------------NED 425
D + +LIG GS+G V +A +L+ ++ ++VF C N D
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 426 FRALVLEYTTNGSLEKV----------------LYSSNYILDILQRLNIMIDVTSALEYL 469
VL+ +EK L+ + L L ++ ++ ++Y+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515
H S I+H DLKP N L++ + + DFG+A+ + + +Q
Sbjct: 173 H---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ 215
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 526 A 526
A
Sbjct: 191 A 191
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 28/140 (20%)
Query: 393 IGRGSFGSVYKARLQDGMEF-AIKVFHFSCSNEDFRALVL---------EYTTNGSLEKV 442
IG G++G+V+KA+ ++ E A+K +E + L ++ L V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 443 LYSSNYILDIL----QRLNIMIDVTSA--------------LEYLHFGYSTPIIHCDLKP 484
L+S + + Q L D + L+ L F +S ++H DLKP
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKP 129
Query: 485 HNKLLDDNIVAHLSDFGIAK 504
N L++ N L++FG+A+
Sbjct: 130 QNLLINRNGELKLANFGLAR 149
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 449 ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL-T 507
+LD I+ +V LEYLH IH D+K N LL ++ ++DFG++ L T
Sbjct: 112 VLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT 168
Query: 508 GEDQSMTQTQT--LAIIGYMAP 527
G D + + + + +MAP
Sbjct: 169 GGDITRNKVRKTFVGTPCWMAP 190
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 526 A 526
A
Sbjct: 194 A 194
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 40/181 (22%)
Query: 385 DGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKVFHFS-------CSNEDFR--------- 427
D + +IG+G F V + + G +FA+K+ + S ED +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 428 ------ALVLEYTTNGSLEKV---LYSSNYILDILQRLNIMIDVTSA---------LEYL 469
L+ Y+++G L V + ++ +I++R + + A LE L
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 470 HFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMA 526
+ + IIH D+KPH LL +++ L FG+A L + + + +MA
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHFMA 203
Query: 527 P 527
P
Sbjct: 204 P 204
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHCDLKPHNK 487
++ EY GSL L S +L +L ID ++ + E + + IH DL+ N
Sbjct: 85 IITEYMAKGSLLDFLKSDEGGKVLLPKL---IDFSAQIAEGMAYIERKNYIHRDLRAANV 141
Query: 488 LLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
L+ ++++ ++DFG+A+++ ED T + I + AP
Sbjct: 142 LVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP 180
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 526 A 526
A
Sbjct: 189 A 189
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 526 A 526
A
Sbjct: 190 A 190
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + +
Sbjct: 134 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 190
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 191 XVATRWYRAP 200
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE-DQSMTQTQ 517
+ + L+Y+H S ++H DLKP N LL+ + DFG+A++ + D + +
Sbjct: 135 LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXE 191
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 192 XVATRWYRAP 201
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 526 A 526
A
Sbjct: 189 A 189
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLL--TGEDQSMTQTQTLAIIGYMA 526
+IH DLKP N L++ N + DFG+A+++ + D S Q ++ ++A
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 526 A 526
A
Sbjct: 190 A 190
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 526 A 526
A
Sbjct: 187 A 187
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCS--------NEDF 426
+L+ T+ F ++G G+FG+VYK + +G + AIK + S +E +
Sbjct: 8 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 427 -----------RALVLEYTTNGSLEKVLYSSNYILDILQR----------LNIMIDVTSA 465
R L + T+ L L +LD ++ LN + +
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEG 126
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 127 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 526 A 526
A
Sbjct: 184 A 184
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 526 A 526
A
Sbjct: 190 A 190
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 15/122 (12%)
Query: 416 VFHFSC----------SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSA 465
+F + C E F +EY LE+ +L L V
Sbjct: 127 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE--EDLNVLTFEDLLCFAYQVAKG 184
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+E+L F +H DL N L+ V + DFG+A+ + + + + + +M
Sbjct: 185 MEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWM 241
Query: 526 AP 527
AP
Sbjct: 242 AP 243
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 9/95 (9%)
Query: 422 SNEDFRALVLEYTTNGSLEKV-----LYSSNYILDI-LQRLNIMID-VTSALEYLHFGYS 474
+N D ++ EY N S+ K + NY I +Q + +I V ++ Y+H
Sbjct: 113 TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH--NE 170
Query: 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
I H D+KP N L+D N LSDFG ++ + +
Sbjct: 171 KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK 205
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 526 A 526
A
Sbjct: 187 A 187
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 40/181 (22%)
Query: 385 DGFSANNLIGRGSFGSVYKA-RLQDGMEFAIKVFHFS-------CSNEDFR--------- 427
D + +IG+G F V + + G +FA+K+ + S ED +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 428 ------ALVLEYTTNGSLEKV---LYSSNYILDILQRLNIMIDVTSA---------LEYL 469
L+ Y+++G L V + ++ +I++R + + A LE L
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 470 HFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMA 526
+ + IIH D+KPH LL +++ L FG+A L + + + +MA
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG--ESGLVAGGRVGTPHFMA 201
Query: 527 P 527
P
Sbjct: 202 P 202
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 133 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 526 A 526
A
Sbjct: 190 A 190
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 139
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 140 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 526 A 526
A
Sbjct: 197 A 197
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQ---KLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195
L L +D+ N+L S+ LG L+ +LQ L +GNEL+ P +L L +L L
Sbjct: 99 LPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 196 RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229
N+L+ L L L L N L +IP
Sbjct: 156 ANNQLTELPAGLLNGLENLDTLLLQENSLYTIPK 189
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G L L ++DL N+L S+ + L L L N L L L L +L L+
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
GN+L P L L L +N+LT +P+ L N
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 131 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 526 A 526
A
Sbjct: 188 A 188
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 49/183 (26%)
Query: 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKV-------------------------- 416
+D + ++G+GSFG V + + G E A+KV
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 417 -------FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
+ F ++ + LV E T G L + S ++ I+ V S + Y+
Sbjct: 91 HPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 148
Query: 470 HFGYSTPIIHCDLKPHNKLL-----DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
H I+H DLKP N LL D NI + DFG++ T + S + Y
Sbjct: 149 H---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLS---THFEASKKMKDKIGTAYY 200
Query: 525 MAP 527
+AP
Sbjct: 201 IAP 203
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQ---KLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195
L L +D+ N+L S+ LG L+ +LQ L +GNEL+ P +L L +L L
Sbjct: 99 LPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 196 RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229
N+L+ L L L L N L +IP
Sbjct: 156 ANNQLTELPAGLLNGLENLDTLLLQENSLYTIPK 189
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G L L ++DL N+L S+ + L L L N L L L L +L L+
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
GN+L P L L L +N+LT +P+ L N
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 450 LDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
L ++L I V + + YL +H DL N L+ +N+V ++DFG+++ +
Sbjct: 171 LSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 510 DQSMTQTQTLAIIGYMAP 527
D I +M P
Sbjct: 228 DYYKADGNDAIPIRWMPP 245
>pdb|1G9U|A Chain A, Crystal Structure Of Yopm-leucine Rich Effector Protein
From Yersinia Pestis
pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A Leucine-Rich
Effector Protein From Yersinia Pestis
Length = 454
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 33/209 (15%)
Query: 45 TLKVFDVDNN--YVLGRLSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNP 102
+LK VDNN L L +++ L +S+N +L L + N +LK +D+ N
Sbjct: 112 SLKSLLVDNNNLKALSDLPPLLEYLGVSNN-------QLEKLPELQNSSFLKIIDVDNNS 164
Query: 103 LDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGK 162
L + + + SLEFI + + E+ NL L +I N L + L
Sbjct: 165 L-----KKLPDLPPSLEFIAAGNNQLEEL--PELQNLPFLTAIYADNNSLKKLPDLPLS- 216
Query: 163 LQKLQFLSFRGNELEGSIPNV--LCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLD 220
L+ + GN + +P + L L ++ N L ++P +L A L++
Sbjct: 217 LESI----VAGNNILEELPELQNLPFLTTIYA----DNNLLKTLPDLPPSLEA---LNVR 265
Query: 221 SNELTSIPSILWNLKDILYLDFWSNLFVG 249
N LT +P + +L +LD N+F G
Sbjct: 266 DNYLTDLPELPQSLT---FLDVSENIFSG 291
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 72/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 17 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 135
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 136 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 526 A 526
A
Sbjct: 193 A 193
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 41/184 (22%)
Query: 360 LPNVSNMQPQASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFH 418
+P N+ Q + F + D +GRG++G V K R + G A+K
Sbjct: 14 IPTTENLYFQGAXENFEVK-----ADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIR 68
Query: 419 FSCSNEDFRALVLE-----YTTNGSLEKVLYSSNY----------------------ILD 451
+ ++++ + L+ + T + Y + + ++D
Sbjct: 69 ATVNSQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVID 128
Query: 452 ILQRL------NIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505
Q + I + + ALE+LH S +IH D+KP N L++ DFGI+
Sbjct: 129 KGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGY 186
Query: 506 LTGE 509
L +
Sbjct: 187 LVDD 190
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQ---KLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195
L L +D+ N+L S+ LG L+ +LQ L +GNEL+ P +L L +L L
Sbjct: 99 LPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 196 RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229
N+L+ L L L L N L +IP
Sbjct: 156 ANNQLTELPAGLLNGLENLDTLLLQENSLYTIPK 189
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G L L ++DL N+L S+ + L L L N L L L L +L L+
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
GN+L P L L L +N+LT +P+ L N
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 456 LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515
LN + + + YL ++H DL N L+ ++DFG+AKLL E++
Sbjct: 127 LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 516 TQTLAIIGYMA 526
I +MA
Sbjct: 184 EGGKVPIKWMA 194
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 180 IPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
+ +V H L QL L N+++ F LT L+ L LD+N+L S+P
Sbjct: 291 LKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLKELALDTNQLKSVP 339
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 456 LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515
LN + + + YL ++H DL N L+ ++DFG+AKLL E++
Sbjct: 127 LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 516 TQTLAIIGYMA 526
I +MA
Sbjct: 184 EGGKVPIKWMA 194
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCS--------NEDF 426
+L+ T+ F ++G G+FG+VYK + +G + AIK + S +E +
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 427 -----------RALVLEYTTNGSLEKVLYSSNYILDILQR----------LNIMIDVTSA 465
R L + T+ L L +LD ++ LN + +
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 123
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG+AKLL E++ I +M
Sbjct: 124 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 526 A 526
A
Sbjct: 181 A 181
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 456 LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515
LN + + + YL ++H DL N L+ ++DFG+AKLL E++
Sbjct: 154 LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 516 TQTLAIIGYMA 526
I +MA
Sbjct: 211 EGGKVPIKWMA 221
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 137 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTG 188
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 189 YVATRWYRAP 198
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 38/157 (24%)
Query: 381 LRATDGFSANNLIGRGSFGSVY-KARLQDGMEFAIKV---------FHFS---------- 420
LR + + IG GSFG +Y + G E AIK+ H
Sbjct: 5 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 64
Query: 421 --------CSNE-DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
C E D+ +V+E SLE + + + L + + S +EY+H
Sbjct: 65 VGIPTIRWCGAEGDYNVMVME-LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH- 122
Query: 472 GYSTPIIHCDLKPHNKLL----DDNIVAHLSDFGIAK 504
S IH D+KP N L+ N+V ++ DFG+AK
Sbjct: 123 --SKNFIHRDVKPDNFLMGLGKKGNLV-YIIDFGLAK 156
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 19/183 (10%)
Query: 82 SFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNI----SGGISEEIG 137
S S K L+ L + RN L F V ++++ + D ++ S
Sbjct: 368 SVFQGCSTLKRLQTLILQRNGLKNFFK--VALMTKNMSSLETLDVSLNSLNSHAYDRTCA 425
Query: 138 NLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRG 197
++ ++L N L GS+ L K++ L N + SIP + HL L +L++
Sbjct: 426 WAESILVLNLSSNMLTGSVFRCLPP--KVKVLDLHNNRI-MSIPKDVTHLQALQELNVAS 482
Query: 198 NKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN--LKDILYLDFWSNLFVGPLPSKI 255
N+L F LT+L+ + L N W+ I YL W N G + +
Sbjct: 483 NQLKSVPDGVFDRLTSLQYIWLHDNP--------WDCTCPGIRYLSEWINKHSGVVRNSA 534
Query: 256 GNL 258
G++
Sbjct: 535 GSV 537
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 168 FLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSG--SIPTCFGNLTALRNLHLDSNELT 225
FL+F N S+ L L L L+ N L + N+++L L + N L
Sbjct: 357 FLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLN 416
Query: 226 SIP---SILWNLKDILYLDFWSNLFVGP----LPSKIGNLKVLTRIDFSRNNLLGDIPTT 278
S + W + IL L+ SN+ G LP K+ L + NN + IP
Sbjct: 417 SHAYDRTCAWA-ESILVLNLSSNMLTGSVFRCLPPKVKVLDL-------HNNRIMSIPKD 468
Query: 279 IQGLKSLQFLSLGHNRLQGSIPN 301
+ L++LQ L++ N+L+ S+P+
Sbjct: 469 VTHLQALQELNVASNQLK-SVPD 490
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 137 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTG 188
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 189 YVATRWYRAP 198
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQ---KLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195
L L +D+ N+L S+ LG L+ +LQ L +GNEL+ P +L L +L L
Sbjct: 99 LPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 196 RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
N+L+ L L L L N L +IP
Sbjct: 156 ANNQLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G L L ++DL N+L S+ + L L L N L L L L +L L+
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
GN+L P L L L +N+LT +P+ L N
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLN 169
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 137 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE-----MTG 188
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 189 YVATRWYRAP 198
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 456 LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507
L I A++++H PIIH DLK N LL + L DFG A ++
Sbjct: 139 LKIFYQTCRAVQHMH-RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 456 LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515
LN + + + YL ++H DL N L+ ++DFG+AKLL E++
Sbjct: 120 LNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 516 TQTLAIIGYMA 526
I +MA
Sbjct: 177 EGGKVPIKWMA 187
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 87/210 (41%), Gaps = 52/210 (24%)
Query: 360 LPNVSNMQPQASRRRFSYQELLRAT-----DGFSANNLIGRGSFGSVYKA-RLQDGMEFA 413
+P S+M + R Y++ L T + + + +G G++GSV A + G+ A
Sbjct: 15 VPRGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA 74
Query: 414 IK--------VFHFSCSNEDFR-----------ALVLEYTTNGSLEKVLYSSNYILDIL- 453
+K + H + + R L+ +T SLE+ ++ Y++ L
Sbjct: 75 VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE--FNDVYLVTHLM 132
Query: 454 ----------QRLN------IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHL 497
Q+L ++ + L+Y+H S IIH DLKP N ++++ +
Sbjct: 133 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKI 189
Query: 498 SDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
DFG+A+ E T +A Y AP
Sbjct: 190 LDFGLARHTDDE-----MTGYVATRWYRAP 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 37/178 (20%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCS---------------- 422
A + N ++G G FG VY+ + + A+K C+
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 423 -------------NEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
E+ +++E G L L + L +L + + + A+ YL
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +H D+ N L+ L DFG+++ + ED L I +M+P
Sbjct: 142 E---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP 195
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 XVATRWYRAP 191
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 44/192 (22%)
Query: 369 QASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSC-- 421
QA R EL R ++G G+FG+VYK + +G + AIK+ + +
Sbjct: 29 QAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP 81
Query: 422 -SNEDF--RALVLEYTTNGSLEKVL--------------YSSNYILDILQR--------- 455
+N +F AL++ + L ++L +L+ +
Sbjct: 82 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL 141
Query: 456 -LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514
LN + + + YL ++H DL N L+ ++DFG+A+LL G+++
Sbjct: 142 LLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 198
Query: 515 QTQTLAIIGYMA 526
I +MA
Sbjct: 199 ADGGKMPIKWMA 210
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 142 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 193
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 194 YVATRWYRAP 203
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 142 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 193
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 194 YVATRWYRAP 203
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 38/157 (24%)
Query: 381 LRATDGFSANNLIGRGSFGSVY-KARLQDGMEFAIKV---------FHFS---------- 420
LR + + IG GSFG +Y + G E AIK+ H
Sbjct: 3 LRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGG 62
Query: 421 --------CSNE-DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF 471
C E D+ +V+E SLE + + + L + + S +EY+H
Sbjct: 63 VGIPTIRWCGAEGDYNVMVME-LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH- 120
Query: 472 GYSTPIIHCDLKPHNKLL----DDNIVAHLSDFGIAK 504
S IH D+KP N L+ N+V ++ DFG+AK
Sbjct: 121 --SKNFIHRDVKPDNFLMGLGKKGNLV-YIIDFGLAK 154
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 37/178 (20%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCS---------------- 422
A + N ++G G FG VY+ + + A+K C+
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 423 -------------NEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
E+ +++E G L L + L +L + + + A+ YL
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +H D+ N L+ L DFG+++ + ED L I +M+P
Sbjct: 130 E---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP 183
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 141 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTG 192
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 193 YVATRWYRAP 202
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 456 LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510
L M+D+ +EYL + +H DL N +L D++ ++DFG++K + D
Sbjct: 150 LKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 135 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTG 186
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 187 YVATRWYRAP 196
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 37/178 (20%)
Query: 383 ATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSCS---------------- 422
A + N ++G G FG VY+ + + A+K C+
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 423 -------------NEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
E+ +++E G L L + L +L + + + A+ YL
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S +H D+ N L+ L DFG+++ + ED L I +M+P
Sbjct: 126 E---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSP 179
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 135 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTG 186
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 187 YVATRWYRAP 196
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 142 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 193
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 194 YVATRWYRAP 203
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Query: 406 LQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILD---ILQRLNIMIDV 462
L+D I H E LV EY L+K L Y+ D I+ N+ + +
Sbjct: 54 LKDLKHANIVTLHDIIHTEKSLTLVFEY-----LDKDL--KQYLDDCGNIINMHNVKLFL 106
Query: 463 TSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
L L + + ++H DLKP N L+++ L+DFG+A+
Sbjct: 107 FQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 132 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 183
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 184 YVATRWYRAP 193
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 132 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 183
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 184 YVATRWYRAP 193
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 135 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 186
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 187 YVATRWYRAP 196
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 141 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 192
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 193 YVATRWYRAP 202
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 129 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 180
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 181 YVATRWYRAP 190
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 449 ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
IL+ + + ++ + ++YLH G ++H D+KP N LL+ ++DFG+++
Sbjct: 105 ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 150 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 201
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 202 YVATRWYRAP 211
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 49/183 (26%)
Query: 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKV-------------------------- 416
+D + ++G+GSFG V + + G E A+KV
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 417 -------FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
+ F ++ + LV E T G L + S ++ I+ V S + Y+
Sbjct: 109 HPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 166
Query: 470 HFGYSTPIIHCDLKPHNKLL-----DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
H I+H DLKP N LL D NI + DFG++ T + S + Y
Sbjct: 167 H---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLS---THFEASKKMKDKIGTAYY 218
Query: 525 MAP 527
+AP
Sbjct: 219 IAP 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 77/197 (39%), Gaps = 30/197 (15%)
Query: 126 CNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNEL--EGSIPNV 183
CN G S G + ++L NKL KL +L LS N L +G
Sbjct: 14 CNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQS 73
Query: 184 LCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP--SILWNLKDILYLD 241
L LDL N + ++ + F L L +L + L + S+ +L++++YLD
Sbjct: 74 DFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 132
Query: 242 F--------WSNLFVGP-----------------LPSKIGNLKVLTRIDFSRNNLLGDIP 276
++ +F G LP L+ LT +D S+ L P
Sbjct: 133 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSP 192
Query: 277 TTIQGLKSLQFLSLGHN 293
T L SLQ L++ HN
Sbjct: 193 TAFNSLSSLQVLNMSHN 209
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 138 NLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNEL-EGSIPNVLCHLAVLFQLDLR 196
+L +LI +D+ + + L L+ L GN E +P++ L L LDL
Sbjct: 124 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 183
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN-LKDILYLDFWSNLFVGP----- 250
+L PT F +L++L+ L++ N S+ + + L + LD+ N +
Sbjct: 184 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243
Query: 251 --LPSKIGNLKVLTRIDFS 267
PS + L LT+ DF+
Sbjct: 244 QHFPSSLAFLN-LTQNDFA 261
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 10/175 (5%)
Query: 130 GGISEEIGNLTDLISIDLGGNKLNGSISIT---LGKLQKLQFLSFRGNELEG-SIPNVLC 185
G S+ T L +DL NG I+++ LG L++L+ L F+ + L+ S +V
Sbjct: 68 GCCSQSDFGTTSLKYLDLS---FNGVITMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFL 123
Query: 186 HLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTS--IPSILWNLKDILYLDFW 243
L L LD+ + F L++L L + N +P I L+++ +LD
Sbjct: 124 SLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLS 183
Query: 244 SNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGS 298
P+ +L L ++ S NN + L SLQ L N + S
Sbjct: 184 QCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTS 238
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 149 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 200
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 201 YVATRWYRAP 210
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 126
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL +++FG
Sbjct: 127 H---SKRVIHRDIKPENLLLGSAGELKIANFG 155
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 132 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 183
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 184 YVATRWYRAP 193
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 49/183 (26%)
Query: 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKV-------------------------- 416
+D + ++G+GSFG V + + G E A+KV
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 417 -------FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
+ F ++ + LV E T G L + S ++ I+ V S + Y+
Sbjct: 108 HPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 165
Query: 470 HFGYSTPIIHCDLKPHNKLL-----DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
H I+H DLKP N LL D NI + DFG++ T + S + Y
Sbjct: 166 H---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLS---THFEASKKMKDKIGTAYY 217
Query: 525 MAP 527
+AP
Sbjct: 218 IAP 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 137 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 188
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 189 YVATRWYRAP 198
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 128 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 179
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 180 YVATRWYRAP 189
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQ---KLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195
L L +D+ N+L S+ LG L+ +LQ L +GNEL+ P +L L +L L
Sbjct: 99 LPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 196 RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229
N L+ L L L L N L +IP
Sbjct: 156 ANNNLTELPAGLLNGLENLDTLLLQENSLYTIPK 189
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G L L ++DL N+L S+ + L L L N L L L L +L L+
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
GN+L P L L L +N LT +P+ L N
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 60/152 (39%), Gaps = 37/152 (24%)
Query: 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVF----------------------HF 419
A + F +G+G FG+VY AR Q A+KV H
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 420 SCSN---------EDFRA-LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
N + R L+LEY G++ + L + D + + ++ +AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS-KFDEQRTATYITELANALSYC 127
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501
H S +IH D+KP N LL +++FG
Sbjct: 128 H---SKRVIHRDIKPENLLLGSAGELKIANFG 156
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 127 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 178
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 179 YVATRWYRAP 188
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 159 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 210
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 211 YVATRWYRAP 220
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 456 LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515
++++ + + +EYL S ++H DL N L+ D + +SD G+ + + D
Sbjct: 131 VHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 187
Query: 516 TQTLAIIGYMAP 527
+L I +MAP
Sbjct: 188 GNSLLPIRWMAP 199
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 127 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 178
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 179 YVATRWYRAP 188
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 49/183 (26%)
Query: 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKV-------------------------- 416
+D + ++G+GSFG V + + G E A+KV
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 417 -------FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
+ F ++ + LV E T G L + S ++ I+ V S + Y+
Sbjct: 85 HPNIMKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYM 142
Query: 470 HFGYSTPIIHCDLKPHNKLL-----DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
H I+H DLKP N LL D NI + DFG++ T + S + Y
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLS---THFEASKKMKDKIGTAYY 194
Query: 525 MAP 527
+AP
Sbjct: 195 IAP 197
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
L+ L F + I+H DLKP N L++ L DFG+A+
Sbjct: 118 LQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR 156
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 136 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 187
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 188 YVATRWYRAP 197
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 126 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 177
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 178 YVATRWYRAP 187
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 149 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 200
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 201 YVATRWYRAP 210
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|3ZYI|A Chain A, Netring2 In Complex With Ngl2
Length = 452
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 66/156 (42%), Gaps = 27/156 (17%)
Query: 93 LKKLD-ISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLI---SIDLG 148
LKKL+ IS +G +L+++ + CNI +++ NLT L+ +++
Sbjct: 181 LKKLEYISEGAFEGLF---------NLKYLNLGMCNI-----KDMPNLTPLVGLEELEMS 226
Query: 149 GNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCF 208
GN + L L+ L +++ N LA L +L+L N LS F
Sbjct: 227 GNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLF 286
Query: 209 GNLTALRNLHLDSNELTSIPSILWNLK-DILYLDFW 243
L L LHL N WN DIL+L +W
Sbjct: 287 TPLRYLVELHLHHNP--------WNCDCDILWLAWW 314
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 150 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 201
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 202 YVATRWYRAP 211
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 140 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 191
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 192 YVATRWYRAP 201
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 135 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 186
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 187 YVATRWYRAP 196
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 77/192 (40%), Gaps = 44/192 (22%)
Query: 369 QASRRRFSYQELLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSC-- 421
QA R EL R ++G G+FG+VYK + +G + AIK+ + +
Sbjct: 6 QAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP 58
Query: 422 -SNEDF--RALVLEYTTNGSLEKVL--------------YSSNYILDILQR--------- 455
+N +F AL++ + L ++L +L+ +
Sbjct: 59 KANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQL 118
Query: 456 -LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514
LN + + + YL ++H DL N L+ ++DFG+A+LL G+++
Sbjct: 119 LLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 175
Query: 515 QTQTLAIIGYMA 526
I +MA
Sbjct: 176 ADGGKMPIKWMA 187
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQ---KLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195
L L +D+ N+L S+ LG L+ +LQ L +GNEL+ P +L L +L L
Sbjct: 99 LPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 196 RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229
N L+ L L L L N L +IP
Sbjct: 156 ANNNLTELPAGLLNGLENLDTLLLQENSLYTIPK 189
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G L L ++DL N+L S+ + L L L N L L L L +L L+
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
GN+L P L L L +N LT +P+ L N
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 126 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 177
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 178 YVATRWYRAP 187
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQ---KLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195
L L +D+ N+L S+ LG L+ +LQ L +GNEL+ P +L L +L L
Sbjct: 99 LPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 196 RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229
N L+ L L L L N L +IP
Sbjct: 156 ANNDLTELPAGLLNGLENLDTLLLQENSLYTIPK 189
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G L L ++DL N+L S+ + L L L N L L L L +L L+
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
GN+L P L L L +N+LT +P+ L N
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLN 169
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%)
Query: 127 NISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCH 186
NI S +L +L SI+ G NKL GK+ KL+ L+ N+L+ +
Sbjct: 157 NIEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLASNQLKSVPDGIFDR 216
Query: 187 LAVLFQLDLRGNKLSGSIP 205
L L ++ L N S P
Sbjct: 217 LTSLQKIWLHTNPWDCSCP 235
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 160 LGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHL 219
L ++ L L R N +E ++ L L ++ NKL FG + L+ L+L
Sbjct: 143 LTDMRNLSHLELRAN-IEEMPSHLFDDLENLESIEFGSNKLRQMPRGIFGKMPKLKQLNL 201
Query: 220 DSNELTSIP 228
SN+L S+P
Sbjct: 202 ASNQLKSVP 210
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 126 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 177
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 178 YVATRWYRAP 187
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQ---KLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195
L L +D+ N+L S+ LG L+ +LQ L +GNEL+ P +L L +L L
Sbjct: 99 LPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 196 RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
N L+ L L L L N L +IP
Sbjct: 156 ANNNLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G L L ++DL N+L S+ + L L L N L L L L +L L+
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
GN+L P L L L +N LT +P+ L N
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 456 LNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515
++++ + + +EYL S ++H DL N L+ D + +SD G+ + + D
Sbjct: 148 VHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLL 204
Query: 516 TQTLAIIGYMAP 527
+L I +MAP
Sbjct: 205 GNSLLPIRWMAP 216
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQ---KLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195
L L +D+ N+L S+ LG L+ +LQ L +GNEL+ P +L L +L L
Sbjct: 100 LPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 156
Query: 196 RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
N L+ L L L L N L +IP
Sbjct: 157 ANNNLTELPAGLLNGLENLDTLLLQENSLYTIP 189
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G L L ++DL N+L S+ + L L L N L L L L +L L+
Sbjct: 75 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 133
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
GN+L P L L L +N LT +P+ L N
Sbjct: 134 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 170
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQSMT 514
I+ V S + YLH I+H DLKP N LL + + + + DFG++ + + +
Sbjct: 141 IIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK--- 194
Query: 515 QTQTLAIIGYMAP 527
+ L Y+AP
Sbjct: 195 MKERLGTAYYIAP 207
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 11/103 (10%)
Query: 428 ALVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
A+V+EY + G L E++ + + D + + S + Y H + + H DLK N
Sbjct: 91 AIVMEYASGGELFERICNAGRFSED--EARFFFQQLISGVSYAH---AMQVAHRDLKLEN 145
Query: 487 KLLDDNIVAHL--SDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
LLD + L +DFG +K Q + T A Y+AP
Sbjct: 146 TLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPA---YIAP 185
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
KF ++ +C++++T L + + ++SRR S +++ R
Sbjct: 23 KFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 65
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 66 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 122
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG AKLL E++ I +M
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 526 A 526
A
Sbjct: 189 A 189
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 139 LTDLISIDLGGNKLNGSISITLGKLQ---KLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195
L L +D+ N+L S+ LG L+ +LQ L +GNEL+ P +L L +L L
Sbjct: 99 LPALTVLDVSFNRLT---SLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSL 155
Query: 196 RGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
N L+ L L L L N L +IP
Sbjct: 156 ANNNLTELPAGLLNGLENLDTLLLQENSLYTIP 188
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Query: 137 GNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196
G L L ++DL N+L S+ + L L L N L L L L +L L+
Sbjct: 74 GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132
Query: 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233
GN+L P L L L +N LT +P+ L N
Sbjct: 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLN 169
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG AKLL E++ I +M
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 526 A 526
A
Sbjct: 189 A 189
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 132 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTG 183
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 184 YVATRWYRAP 193
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 255 IGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQ 296
G L L +++ RN L G P +G +Q L LG N+++
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK 91
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 160 LGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHL 219
G+L L L + N+L G PN + + +L L NK+ F L L+ L+L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 220 DSNELTSI-PSILWNLKDILYLDFWSNLF 247
N+++ + P +L + L+ SN F
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASNPF 138
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 136 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 187
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 188 YVATRWYRAP 197
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 7/108 (6%)
Query: 422 SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSAL-EYLHFGYSTPIIHC 480
+ E+ ++ E+ GSL L S +L +L ID ++ + E + + IH
Sbjct: 77 TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKL---IDFSAQIAEGMAYIERKNYIHR 133
Query: 481 DLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI-IGYMAP 527
DL+ N L+ ++++ ++DFG+A+++ ED T + I + AP
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVI--EDNEYTAREGAKFPIKWTAP 179
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG AKLL E++ I +M
Sbjct: 137 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 526 A 526
A
Sbjct: 194 A 194
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 466 LEYLHFGYSTPIIHCDLKPHN-KLLDDNI---VAHLSDFGIA 503
L+ +H+ +S I H DLKP N LLD N+ L DFGIA
Sbjct: 139 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 136 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE-----MTG 187
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 188 YVATRWYRAP 197
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T
Sbjct: 136 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE-----MTG 187
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 188 YVATRWYRAP 197
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG AKLL E++ I +M
Sbjct: 132 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 526 A 526
A
Sbjct: 189 A 189
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 466 LEYLHFGYSTPIIHCDLKPHN-KLLDDNI---VAHLSDFGIA 503
L+ +H+ +S I H DLKP N LLD N+ L DFGIA
Sbjct: 118 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG AKLL E++ I +M
Sbjct: 130 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 526 A 526
A
Sbjct: 187 A 187
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 157 SITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRN 216
S+ G Q L N++ P V L L L+L N+L+ F LT L +
Sbjct: 33 SVPAGIPTTTQVLHLYINQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTKLTH 92
Query: 217 LHLDSNELTSIP-SILWNLKDILYLDFWSN 245
L L N+L SIP + NLK + ++ ++N
Sbjct: 93 LALHINQLKSIPMGVFDNLKSLTHIYLFNN 122
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 466 LEYLHFGYSTPIIHCDLKPHN-KLLDDNI---VAHLSDFGIA 503
L+ +H+ +S I H DLKP N LLD N+ L DFGIA
Sbjct: 125 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 38/181 (20%)
Query: 380 LLRATDGFSANNLIGRGSFGSVYKA-RLQDG----MEFAIKVFHFSCSNEDFRALVLEYT 434
+L+ T+ F ++G G+FG+VYK + +G + AIK + S + + ++ E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 435 TNGSLEKV-------------------LYSSNYILDILQR----------LNIMIDVTSA 465
S++ L +LD ++ LN + +
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYM 525
+ YL ++H DL N L+ ++DFG AKLL E++ I +M
Sbjct: 134 MNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 526 A 526
A
Sbjct: 191 A 191
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 469 LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ F S IH D+ N LL + VA + DFG+A+ + + + + + +MAP
Sbjct: 173 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 231
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 205 LKWMAP 210
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 428 ALVLEYTTNGSL-EKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
A+++EY + G L E++ + + D + + S + Y H S I H DLK N
Sbjct: 92 AIIMEYASGGELYERICNAGRFSED--EARFFFQQLLSGVSYCH---SMQICHRDLKLEN 146
Query: 487 KLLDDNIVAHLS--DFGIAKLLTGEDQSMTQTQTLAIIG---YMAP 527
LLD + L DFG +K S+ +Q + +G Y+AP
Sbjct: 147 TLLDGSPAPRLKICDFGYSK------SSVLHSQPKSTVGTPAYIAP 186
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 205 LKWMAP 210
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T+
Sbjct: 126 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR 182
Query: 518 TLAIIGYMAP 527
Y AP
Sbjct: 183 -----WYRAP 187
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 469 LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ F S IH D+ N LL + VA + DFG+A+ + + + + + +MAP
Sbjct: 165 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 223
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T+
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR 186
Query: 518 TLAIIGYMAP 527
Y AP
Sbjct: 187 -----WYRAP 191
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+ E T+
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR 186
Query: 518 TLAIIGYMAP 527
Y AP
Sbjct: 187 -----WYRAP 191
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 50/158 (31%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFRALVL-------------------- 431
IG+G+FG V+KAR + G + A+K E F L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 432 ----------------------EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
E+ G L VL + L ++R+ M+ L L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----LNGL 138
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507
++ + I+H D+K N L+ + V L+DFG+A+ +
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+
Sbjct: 153 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 196
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 469 LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ F S IH D+ N LL + VA + DFG+A+ + + + + + +MAP
Sbjct: 179 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 237
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 58/151 (38%), Gaps = 36/151 (23%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFRALVLE------------------- 432
IG+G+FG V+KAR + G + A+K E F L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 433 -YTTNGSLEKVLYSSNYILDILQR------LNIMIDVTSA---------LEYLHFGYSTP 476
T + S + D + N+++ T + L L++ +
Sbjct: 86 CRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNK 145
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507
I+H D+K N L+ + V L+DFG+A+ +
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 469 LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ F S IH D+ N LL + VA + DFG+A+ + + + + + +MAP
Sbjct: 171 MAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 229
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 214 LKWMAP 219
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 23 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 65
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 66 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 122
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + D+G+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 459 MIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAKLL 506
M + L+Y+H S ++H DLKP N ++ +++V + DFG+A+++
Sbjct: 126 MYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIM 171
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKL 488
+V+E+ G+L ++ + ++ Q + + V AL YLH + +IH D+K + L
Sbjct: 119 VVMEFLEGGALTDIVTHTR--MNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSIL 173
Query: 489 LDDNIVAHLSDFGIAKLLTGE 509
L + LSDFG ++ E
Sbjct: 174 LTSDGRIKLSDFGFCAQVSKE 194
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 214 LKWMAP 219
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 214 LKWMAP 219
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
++ + L+Y+H S IIH DLKP N ++++ + DFG+A+
Sbjct: 150 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 193
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 69/183 (37%), Gaps = 49/183 (26%)
Query: 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKV-------------------------- 416
+D + ++G+GSFG V + + G E A+KV
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 417 -------FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
+ F ++ + LV E T G L + S ++ I+ V S + Y
Sbjct: 85 HPNIXKLYEF-FEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQVLSGITYX 142
Query: 470 HFGYSTPIIHCDLKPHNKLL-----DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGY 524
H I+H DLKP N LL D NI + DFG++ T + S + Y
Sbjct: 143 H---KNKIVHRDLKPENLLLESKSKDANI--RIIDFGLS---THFEASKKXKDKIGTAYY 194
Query: 525 MAP 527
+AP
Sbjct: 195 IAP 197
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 50/158 (31%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFRALVL-------------------- 431
IG+G+FG V+KAR + G + A+K E F L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 432 ----------------------EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
E+ G L VL + L ++R+ M+ L L
Sbjct: 86 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----LNGL 138
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507
++ + I+H D+K N L+ + V L+DFG+A+ +
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 176
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 23 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 65
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 66 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 122
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 48/190 (25%)
Query: 383 ATDGFSANNLIGRGSFGSVYK-----------------------ARLQDGMEF---AIKV 416
A + + + +G+GSFG VY+ A +++ +EF A +
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 417 FHFSC----------SNEDFRALVLEYTTNGSLEKVLYS------SNYIL---DILQRLN 457
F+C S +++E T G L+ L S +N +L + + +
Sbjct: 68 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 127
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
+ ++ + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 128 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 184
Query: 518 TLAIIGYMAP 527
L + +M+P
Sbjct: 185 GLLPVRWMSP 194
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 23 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 65
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 66 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 122
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 200 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 257 LKWMAP 262
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP 213
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 214 LKWMAP 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 23 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 65
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 66 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 122
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 23 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 65
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 66 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 122
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 202 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 259 LKWMAP 264
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 156 ISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTA-L 214
+ +L K +KL L N+LEG +P + L L+L N+++ IP F T +
Sbjct: 322 VETSLQKXKKLGXLECLYNQLEGKLPAFGSEIK-LASLNLAYNQIT-EIPANFCGFTEQV 379
Query: 215 RNLHLDSNELTSIPSIL 231
NL N+L IP+I
Sbjct: 380 ENLSFAHNKLKYIPNIF 396
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 266 LKWMAP 271
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 414 IKVFHFSCSNEDFRALVL-EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG 472
+ VF + S E+F + L + L ++ S D +Q L + + L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFL--IYQILRGLKYIH-- 142
Query: 473 YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
S IIH DLKP N ++++ + DFG+ + E T +A Y AP
Sbjct: 143 -SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE-----MTGYVATRWYRAP 191
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 48/190 (25%)
Query: 383 ATDGFSANNLIGRGSFGSVYK-----------------------ARLQDGMEF---AIKV 416
A + + + +G+GSFG VY+ A +++ +EF A +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 417 FHFSC----------SNEDFRALVLEYTTNGSLEKVLYS------SNYIL---DILQRLN 457
F+C S +++E T G L+ L S +N +L + + +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
+ ++ + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 137 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGK 193
Query: 518 TLAIIGYMAP 527
L + +M+P
Sbjct: 194 GLLPVRWMSP 203
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 60/158 (37%), Gaps = 50/158 (31%)
Query: 393 IGRGSFGSVYKAR-LQDGMEFAIKVFHFSCSNEDFRALVL-------------------- 431
IG+G+FG V+KAR + G + A+K E F L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 432 ----------------------EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYL 469
E+ G L VL + L ++R+ M+ L L
Sbjct: 85 CRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KFTLSEIKRVMQML-----LNGL 137
Query: 470 HFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507
++ + I+H D+K N L+ + V L+DFG+A+ +
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 264 LKWMAP 269
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 205 LKWMAP 210
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 194 VAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 250
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 251 LKWMAP 256
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 204
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 205 LKWMAP 210
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 23 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 65
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 66 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 122
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 23 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 65
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 66 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 122
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 40/172 (23%)
Query: 382 RATDGFSANNLIGRGSFGSVYKARLQD-GMEFAIK--VFHFSCSNEDFRAL----VLEYT 434
+ D F + G+G+FG+V + + GM AIK + N + + + VL +
Sbjct: 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHP 79
Query: 435 TNGSLEKVLYS--------------SNYILDILQRL------------NIMIDV-----T 463
L+ Y+ Y+ D L R I+I V
Sbjct: 80 NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLI 139
Query: 464 SALEYLHFGYSTPIIHCDLKPHNKLLDD-NIVAHLSDFGIAKLLTGEDQSMT 514
++ LH S + H D+KPHN L+++ + L DFG AK L+ + ++
Sbjct: 140 RSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA 190
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 210 LKWMAP 215
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 153 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 209
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 210 LKWMAP 215
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 213
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 214 LKWMAP 219
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 22 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 64
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 65 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 121
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 122 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAI 521
V +E+L S IH DL N LL + V + DFG+A+ + + + +
Sbjct: 159 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 215
Query: 522 IGYMAP 527
+ +MAP
Sbjct: 216 LKWMAP 221
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 23 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 65
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 66 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 122
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 420 SCSNEDFRAL-VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPII 478
SC + R V+EY G L + + + R +++ AL YLH II
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGII 143
Query: 479 HCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ DLK N LLD L+D+G+ K G T + Y+AP
Sbjct: 144 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 190
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 22 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 64
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 65 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 121
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 122 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 429 LVLEYTTNGSLEKVL--YSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
+V E GSL L + +++L L R + V + YL S IH DL N
Sbjct: 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 151
Query: 487 KLLDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
LL + + DFG+ + L +D + Q + AP
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 193
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
FH + DF +VLE SL + L+ L + + + +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNR 137
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTL-AIIGYMAP 527
+IH DLK N L++++ + DFG+A T + + +TL Y+AP
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAP 186
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
FH + DF +VLE SL + L+ L + + + +YLH
Sbjct: 82 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNR 137
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTL-AIIGYMAP 527
+IH DLK N L++++ + DFG+A T + + +TL Y+AP
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAP 186
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 420 SCSNEDFRAL-VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPII 478
SC + R V+EY G L + + + R +++ AL YLH II
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGII 132
Query: 479 HCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ DLK N LLD L+D+G+ K G T + Y+AP
Sbjct: 133 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 179
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 346 KFGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSV 401
+F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 23 QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV----------------- 65
Query: 402 YKARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMID 461
+ L++ + H N+ L+LE G L L + + + +
Sbjct: 66 --SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQ 122
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 123 ILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%)
Query: 462 VTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
V L+ L + ++ IIH DLKP N ++++ + DFG+A+ E
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE 181
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
FH + DF +VLE SL + L+ L + + + +YLH
Sbjct: 86 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNR 141
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTL-AIIGYMAP 527
+IH DLK N L++++ + DFG+A T + + +TL Y+AP
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLA---TKVEYDGERKKTLCGTPNYIAP 190
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 193 LDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228
LDL NK+ SIP L AL+ L++ SN+L S+P
Sbjct: 426 LDLHSNKI-KSIPKQVVKLEALQELNVASNQLKSVP 460
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 142 LISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLS 201
L+S+++ N L +I L +++ L N+++ SIP + L L +L++ N+L
Sbjct: 401 LLSLNMSSNILTDTIFRCLPP--RIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457
Query: 202 GSIPTCFGNLTALRNLHLDSN 222
F LT+L+ + L +N
Sbjct: 458 SVPDGIFDRLTSLQKIWLHTN 478
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 420 SCSNEDFRAL-VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPII 478
SC + R V+EY G L + + + R +++ AL YLH II
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGII 128
Query: 479 HCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ DLK N LLD L+D+G+ K G T + Y+AP
Sbjct: 129 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSXFCGTPNYIAP 175
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
FH + DF +VLE SL + L+ L + + + +YLH
Sbjct: 106 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNR 161
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIA 503
+IH DLK N L++++ + DFG+A
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLA 188
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 67/165 (40%), Gaps = 31/165 (18%)
Query: 347 FGLISRCQKRATKLPNVSNM----QPQASRRRFSYQELLRATDGFSANNLIGRGSFGSVY 402
F ++ +C++++T L + + ++SRR S +++ R
Sbjct: 24 FAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREV------------------ 65
Query: 403 KARLQDGMEFAIKVFHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDV 462
+ L++ + H N+ L+LE G L L + + + + +
Sbjct: 66 -SILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTE-EEATEFLKQI 123
Query: 463 TSALEYLHFGYSTPIIHCDLKPHN-KLLDDNIVA---HLSDFGIA 503
+ + YLH S I H DLKP N LLD N+ + DFG+A
Sbjct: 124 LNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 464 SALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
L+Y+H S ++H DLKP N ++++ + DFG+A+ E
Sbjct: 155 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 197
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 7/109 (6%)
Query: 420 SCSNEDFRAL-VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPII 478
SC + R V+EY G L + + + R +++ AL YLH II
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF-YSAEISLALNYLH---ERGII 175
Query: 479 HCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ DLK N LLD L+D+G+ K G T + Y+AP
Sbjct: 176 YRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSTFCGTPNYIAP 222
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 37/143 (25%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRA------------------------ 428
+G G+FG VYKA+ ++ A + S E+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 429 ------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
+++E+ G+++ V+ L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 483 KPHNKL--LDDNIVAHLSDFGIA 503
K N L LD +I L+DFG++
Sbjct: 162 KAGNILFTLDGDI--KLADFGVS 182
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 429 LVLEYTTNGSLEKVL--YSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
+V E GSL L + +++L L R + V + YL S IH DL N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 487 KLLDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
LL + + DFG+ + L +D + Q + AP
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAP 183
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 37/143 (25%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRA------------------------ 428
+G G+FG VYKA+ ++ A + S E+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 429 ------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
+++E+ G+++ V+ L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 483 KPHNKL--LDDNIVAHLSDFGIA 503
K N L LD +I L+DFG++
Sbjct: 162 KAGNILFTLDGDI--KLADFGVS 182
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 58/139 (41%), Gaps = 2/139 (1%)
Query: 93 LKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKL 152
+K D+S++ + L V +F+ LE + ++ I+ LT L+ ++L N L
Sbjct: 277 VKTCDLSKSKIFALLKSVFSHFTD-LEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL 335
Query: 153 NGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLT 212
S L KL+ L N + L L +L L N+L F LT
Sbjct: 336 GSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLT 395
Query: 213 ALRNLHLDSNEL-TSIPSI 230
+L+ + L +N S P I
Sbjct: 396 SLQKIWLHTNPWDCSCPRI 414
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
FH + DF +VLE SL + L+ L + + + +YLH
Sbjct: 104 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNR 159
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIA 503
+IH DLK N L++++ + DFG+A
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLA 186
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 56/143 (39%), Gaps = 37/143 (25%)
Query: 393 IGRGSFGSVYKARLQDGMEFAIKVFHFSCSNEDFRA------------------------ 428
+G G+FG VYKA+ ++ A + S E+
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 429 ------LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482
+++E+ G+++ V+ L Q + AL YLH IIH DL
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDL 161
Query: 483 KPHNKL--LDDNIVAHLSDFGIA 503
K N L LD +I L+DFG++
Sbjct: 162 KAGNILFTLDGDI--KLADFGVS 182
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
++ + L+Y+H S ++H DLKP N ++++ + DFG+A+ E
Sbjct: 131 LVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 429 LVLEYTTNGSLEKVL--YSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
+V E GSL L + +++L L R + V + YL S IH DL N
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 145
Query: 487 KLLDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
LL + + DFG+ + L +D + Q + AP
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 417 FHFSCSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP 476
FH + DF +VLE SL + L+ L + + + +YLH
Sbjct: 80 FHGFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLH---RNR 135
Query: 477 IIHCDLKPHNKLLDDNIVAHLSDFGIA 503
+IH DLK N L++++ + DFG+A
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLA 162
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 429 LVLEYTTNGSLEKVL--YSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
+V E GSL L + +++L L R + V + YL S IH DL N
Sbjct: 91 MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARN 145
Query: 487 KLLDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
LL + + DFG+ + L +D + Q + AP
Sbjct: 146 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 187
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 429 LVLEYTTNGSLEKVL--YSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
+V E GSL L + +++L L R + V + YL S IH DL N
Sbjct: 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 151
Query: 487 KLLDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
LL + + DFG+ + L +D + Q + AP
Sbjct: 152 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 193
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 24/50 (48%)
Query: 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
IH DL N LL + + DFG+A+ + + + + + +MAP
Sbjct: 190 IHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAP 239
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 429 LVLEYTTNGSLEKVL--YSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
+V E GSL L + +++L L R + V + YL S IH DL N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 487 KLLDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
LL + + DFG+ + L +D + Q + AP
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 8/102 (7%)
Query: 429 LVLEYTTNGSLEKVL--YSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHN 486
+V E GSL L + +++L L R + V + YL S IH DL N
Sbjct: 87 MVTELAPLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARN 141
Query: 487 KLLDDNIVAHLSDFGIAKLLT-GEDQSMTQTQTLAIIGYMAP 527
LL + + DFG+ + L +D + Q + AP
Sbjct: 142 LLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAP 183
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 206 TCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRID 265
TC N+ R LT IP+ L + I + N P K L RID
Sbjct: 10 TCSNNIVDCR-----GKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRID 62
Query: 266 FSRNNLLGDIPTTIQGLKSLQFLSLGHNRL 295
S N + P QGL+SL L L N++
Sbjct: 63 LSNNQISELAPDAFQGLRSLNSLVLYGNKI 92
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 206 TCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRID 265
TC N+ R LT IP+ L + I + N P K L RID
Sbjct: 10 TCSNNIVDCR-----GKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRID 62
Query: 266 FSRNNLLGDIPTTIQGLKSLQFLSLGHNRL 295
S N + P QGL+SL L L N++
Sbjct: 63 LSNNQISELAPDAFQGLRSLNSLVLYGNKI 92
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIA 503
IM V S YLH I+H DLKP N LL+ + + + DFG++
Sbjct: 126 IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 6/49 (12%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIA 503
IM V S YLH I+H DLKP N LL+ + + + DFG++
Sbjct: 109 IMKQVLSGTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 48/190 (25%)
Query: 383 ATDGFSANNLIGRGSFGSVYK-----------------------ARLQDGMEF---AIKV 416
A + + + +G+GSFG VY+ A +++ +EF A +
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 417 FHFSC----------SNEDFRALVLEYTTNGSLEKVLYS------SNYIL---DILQRLN 457
F+C S +++E T G L+ L S +N +L + + +
Sbjct: 70 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 129
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
+ ++ + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 130 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 186
Query: 518 TLAIIGYMAP 527
L + +M+P
Sbjct: 187 GLLPVRWMSP 196
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 31/174 (17%)
Query: 93 LKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKL 152
L++L +S+N L LP ++L+ + + + I+ L +I ++LG N L
Sbjct: 102 LERLYLSKNQLKE-LPE---KMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157
Query: 153 NGSISITLGKLQKLQFLSF------------------------RGNELEGSIPNVLCHLA 188
S I G Q ++ LS+ GN++ L L
Sbjct: 158 KSS-GIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLN 216
Query: 189 VLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLK--DILYL 240
L +L L N +S N LR LHL++N+L +P L + K ++YL
Sbjct: 217 NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYL 270
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
+++LH S IIH DLKP N ++ + + DFG+A+
Sbjct: 139 IKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 469 LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ F S IH DL N LL + + DFG+A+ + + + + + +MAP
Sbjct: 174 MAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 232
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 48/198 (24%)
Query: 375 FSYQELLRATDGFSANNLIGRGSFGSVYK-----------------------ARLQDGME 411
F E A + + + +G+GSFG VY+ A +++ +E
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 412 F---AIKVFHFSC----------SNEDFRALVLEYTTNGSLEKVLYS------SNYIL-- 450
F A + F+C S +++E T G L+ L S +N +L
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 451 -DILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509
+ + + + ++ + YL+ + +H DL N ++ ++ + DFG+ + +
Sbjct: 126 PSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYET 182
Query: 510 DQSMTQTQTLAIIGYMAP 527
D + L + +M+P
Sbjct: 183 DYYRKGGKGLLPVRWMSP 200
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 71/174 (40%), Gaps = 31/174 (17%)
Query: 93 LKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKL 152
L++L +S+N L LP ++L+ + + + I+ L +I ++LG N L
Sbjct: 102 LERLYLSKNQLKE-LPE---KMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 157
Query: 153 NGSISITLGKLQKLQFLSF------------------------RGNELEGSIPNVLCHLA 188
S I G Q ++ LS+ GN++ L L
Sbjct: 158 KSS-GIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLN 216
Query: 189 VLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLK--DILYL 240
L +L L N +S N LR LHL++N+L +P L + K ++YL
Sbjct: 217 NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYL 270
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
++ + L+Y+H S IIH DLKP N ++++ + FG+A+ E T
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE-----MTG 181
Query: 518 TLAIIGYMAP 527
+A Y AP
Sbjct: 182 YVATRWYRAP 191
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 466 LEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504
+++LH S IIH DLKP N ++ + + DFG+A+
Sbjct: 139 IKHLH---SAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 27/59 (45%)
Query: 469 LHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527
+ F S IH DL N LL + + DFG+A+ + + + + + +MAP
Sbjct: 176 MAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 234
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 76/190 (40%), Gaps = 48/190 (25%)
Query: 383 ATDGFSANNLIGRGSFGSVYK-----------------------ARLQDGMEF---AIKV 416
A + + + +G+GSFG VY+ A +++ +EF A +
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 417 FHFSC----------SNEDFRALVLEYTTNGSLEKVLYS------SNYIL---DILQRLN 457
F+C S +++E T G L+ L S +N +L + + +
Sbjct: 77 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQ 136
Query: 458 IMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQ 517
+ ++ + YL+ + +H DL N ++ ++ + DFG+ + + D +
Sbjct: 137 MAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGK 193
Query: 518 TLAIIGYMAP 527
L + +M+P
Sbjct: 194 GLLPVRWMSP 203
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,964,831
Number of Sequences: 62578
Number of extensions: 557901
Number of successful extensions: 3079
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 385
Number of HSP's that attempted gapping in prelim test: 1509
Number of HSP's gapped (non-prelim): 1583
length of query: 527
length of database: 14,973,337
effective HSP length: 103
effective length of query: 424
effective length of database: 8,527,803
effective search space: 3615788472
effective search space used: 3615788472
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)