Query 035895
Match_columns 527
No_of_seqs 618 out of 4318
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 12:23:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 1.6E-40 5.6E-45 368.3 27.7 325 20-345 293-718 (768)
2 3rgz_A Protein brassinosteroid 100.0 7.4E-40 2.5E-44 363.0 24.6 330 10-344 258-693 (768)
3 3v47_A TOLL-like receptor 5B a 100.0 2.3E-37 8E-42 322.7 20.8 319 21-345 30-409 (455)
4 4eco_A Uncharacterized protein 100.0 2.6E-37 9E-42 335.2 21.4 325 9-345 66-527 (636)
5 2id5_A Lingo-1, leucine rich r 100.0 3.3E-36 1.1E-40 316.1 24.3 308 28-344 19-333 (477)
6 3t6q_A CD180 antigen; protein- 100.0 3.5E-36 1.2E-40 325.2 25.2 324 15-344 27-413 (606)
7 4eco_A Uncharacterized protein 100.0 2E-36 6.8E-41 328.3 20.9 312 19-343 247-599 (636)
8 2id5_A Lingo-1, leucine rich r 100.0 8.1E-36 2.8E-40 313.0 23.3 298 19-322 30-335 (477)
9 3t6q_A CD180 antigen; protein- 100.0 2.8E-35 9.6E-40 318.2 27.6 317 20-344 152-536 (606)
10 4ecn_A Leucine-rich repeat pro 100.0 1.7E-35 5.8E-40 327.4 24.4 317 16-345 315-767 (876)
11 3vq2_A TLR4, TOLL-like recepto 100.0 7.9E-36 2.7E-40 322.5 21.3 137 18-160 29-173 (606)
12 3vq2_A TLR4, TOLL-like recepto 100.0 1.6E-35 5.4E-40 320.1 22.5 112 19-136 54-173 (606)
13 2z7x_B TOLL-like receptor 1, v 100.0 3.6E-35 1.2E-39 311.4 24.5 314 15-343 15-480 (520)
14 3v47_A TOLL-like receptor 5B a 100.0 2.1E-35 7.3E-40 307.9 22.2 308 28-345 18-385 (455)
15 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.4E-35 3.2E-39 311.2 26.7 315 15-344 46-510 (562)
16 1ziw_A TOLL-like receptor 3; i 100.0 4.4E-34 1.5E-38 313.0 30.5 322 22-343 249-621 (680)
17 2z63_A TOLL-like receptor 4, v 100.0 6.9E-35 2.4E-39 312.7 23.2 160 185-344 344-507 (570)
18 4ecn_A Leucine-rich repeat pro 100.0 1.1E-34 3.7E-39 321.0 22.7 311 19-343 489-839 (876)
19 2z63_A TOLL-like receptor 4, v 100.0 7.2E-35 2.5E-39 312.5 20.4 135 209-344 344-483 (570)
20 1ziw_A TOLL-like receptor 3; i 100.0 1E-33 3.5E-38 310.1 27.4 322 16-343 20-442 (680)
21 2z81_A CD282 antigen, TOLL-lik 100.0 1.2E-33 4E-38 301.9 22.9 155 185-343 331-509 (549)
22 3j0a_A TOLL-like receptor 5; m 100.0 2.1E-33 7.1E-38 314.4 23.8 297 19-321 22-376 (844)
23 1ogq_A PGIP-2, polygalacturona 100.0 5.5E-34 1.9E-38 282.2 16.8 248 64-318 52-302 (313)
24 1ogq_A PGIP-2, polygalacturona 100.0 5.7E-34 1.9E-38 282.1 15.5 249 21-295 50-303 (313)
25 3j0a_A TOLL-like receptor 5; m 100.0 7.7E-33 2.6E-37 309.8 26.6 309 25-343 8-374 (844)
26 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 5.1E-33 1.7E-37 297.7 23.3 312 14-343 24-462 (562)
27 2z7x_B TOLL-like receptor 1, v 100.0 8.1E-33 2.8E-37 293.4 24.3 295 19-324 43-485 (520)
28 4fmz_A Internalin; leucine ric 100.0 2E-32 6.9E-37 275.0 25.1 304 14-343 37-345 (347)
29 2ft3_A Biglycan; proteoglycan, 100.0 3.1E-32 1.1E-36 272.1 25.0 282 45-340 34-329 (332)
30 3o6n_A APL1; leucine-rich repe 100.0 1.8E-32 6.1E-37 280.0 23.0 261 64-342 71-350 (390)
31 2z81_A CD282 antigen, TOLL-lik 100.0 6.3E-33 2.2E-37 296.2 19.2 316 19-344 24-444 (549)
32 1o6v_A Internalin A; bacterial 100.0 8.6E-32 2.9E-36 281.5 27.1 299 18-344 65-388 (466)
33 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-32 5.6E-37 297.6 22.2 134 22-161 53-194 (635)
34 3oja_B Anopheles plasmodium-re 100.0 2.7E-32 9.3E-37 294.0 23.0 298 23-343 53-357 (597)
35 1xku_A Decorin; proteoglycan, 100.0 1.9E-31 6.4E-36 266.1 26.2 284 44-340 31-328 (330)
36 4fmz_A Internalin; leucine ric 100.0 2.9E-31 9.9E-36 266.6 25.2 280 17-320 62-346 (347)
37 3o6n_A APL1; leucine-rich repe 100.0 2.7E-31 9.2E-36 271.3 25.0 266 64-344 47-331 (390)
38 3oja_B Anopheles plasmodium-re 100.0 2.7E-31 9.3E-36 286.2 25.7 284 41-344 48-337 (597)
39 1xku_A Decorin; proteoglycan, 100.0 5E-31 1.7E-35 263.1 24.1 266 63-343 32-305 (330)
40 1o6v_A Internalin A; bacterial 100.0 1.1E-30 3.6E-35 273.2 27.2 305 11-343 36-365 (466)
41 2ft3_A Biglycan; proteoglycan, 100.0 5.3E-31 1.8E-35 263.1 22.4 265 63-343 34-306 (332)
42 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-30 4.1E-35 271.4 24.7 298 15-344 36-352 (457)
43 2z80_A TOLL-like receptor 2, v 100.0 1.8E-31 6.2E-36 268.8 17.8 255 64-324 54-318 (353)
44 3zyi_A Leucine-rich repeat-con 100.0 2.4E-30 8.1E-35 269.5 22.6 248 64-321 56-304 (452)
45 3zyj_A Leucine-rich repeat-con 100.0 2.7E-30 9.3E-35 268.1 23.0 247 64-320 45-292 (440)
46 4g8a_A TOLL-like receptor 4; l 100.0 6.3E-30 2.2E-34 277.3 26.7 332 6-344 62-580 (635)
47 3omv_A RAF proto-oncogene seri 100.0 1.3E-31 4.4E-36 261.9 11.7 141 382-527 33-203 (307)
48 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.4E-31 4.9E-36 260.9 12.0 140 384-527 31-203 (311)
49 4fcg_A Uncharacterized protein 100.0 2.1E-30 7.1E-35 258.1 19.7 225 91-320 81-314 (328)
50 2z66_A Variable lymphocyte rec 100.0 4.5E-30 1.5E-34 253.3 20.5 248 66-323 11-264 (306)
51 4fcg_A Uncharacterized protein 100.0 6.6E-30 2.2E-34 254.5 19.5 223 116-342 81-312 (328)
52 4asz_A BDNF/NT-3 growth factor 100.0 3.3E-31 1.1E-35 258.8 9.4 140 385-527 13-199 (299)
53 4gt4_A Tyrosine-protein kinase 100.0 6E-31 2.1E-35 258.1 10.9 140 385-527 26-216 (308)
54 4aoj_A High affinity nerve gro 100.0 9E-31 3.1E-35 259.3 11.8 140 385-527 41-229 (329)
55 4b9d_A Serine/threonine-protei 100.0 6.9E-31 2.4E-35 260.4 10.2 140 383-527 22-194 (350)
56 4g3f_A NF-kappa-beta-inducing 100.0 1.8E-30 6.1E-35 256.3 12.3 141 383-527 56-225 (336)
57 4fih_A Serine/threonine-protei 100.0 2E-30 6.8E-35 256.7 12.6 136 385-527 74-239 (346)
58 1jl5_A Outer protein YOPM; leu 100.0 7.5E-29 2.6E-33 257.6 23.8 255 21-321 91-351 (454)
59 3bz5_A Internalin-J, INLJ; leu 100.0 4.8E-29 1.7E-33 259.3 22.3 285 30-344 28-331 (457)
60 1ozn_A Reticulon 4 receptor; N 100.0 1.4E-29 4.8E-34 247.1 16.4 205 91-296 32-238 (285)
61 3hmm_A TGF-beta receptor type- 100.0 4.5E-30 1.5E-34 252.2 12.6 140 385-527 3-181 (303)
62 3zyi_A Leucine-rich repeat-con 100.0 9.1E-29 3.1E-33 257.5 22.7 247 92-344 55-303 (452)
63 3ubd_A Ribosomal protein S6 ki 100.0 2.3E-30 7.9E-35 252.4 9.8 137 385-527 24-195 (304)
64 2z66_A Variable lymphocyte rec 100.0 1E-29 3.4E-34 250.8 14.2 277 48-331 11-298 (306)
65 4fie_A Serine/threonine-protei 100.0 7.8E-30 2.7E-34 258.7 13.6 136 385-527 151-316 (423)
66 2z80_A TOLL-like receptor 2, v 100.0 6.9E-30 2.4E-34 257.2 12.7 271 66-345 35-315 (353)
67 3zyj_A Leucine-rich repeat-con 100.0 1.8E-28 6E-33 254.5 22.7 247 92-344 44-292 (440)
68 4ase_A Vascular endothelial gr 100.0 9.8E-30 3.4E-34 253.9 11.4 149 376-527 55-256 (353)
69 3hyh_A Carbon catabolite-derep 100.0 1.7E-29 5.7E-34 242.9 12.2 136 384-527 12-180 (275)
70 1ozn_A Reticulon 4 receptor; N 100.0 1.6E-28 5.5E-33 239.6 19.0 227 93-323 13-241 (285)
71 3fpq_A Serine/threonine-protei 100.0 4.4E-29 1.5E-33 242.1 14.1 133 387-527 28-199 (290)
72 1jl5_A Outer protein YOPM; leu 100.0 4.7E-28 1.6E-32 251.6 22.1 245 23-306 133-382 (454)
73 4g31_A Eukaryotic translation 100.0 2.5E-29 8.5E-34 245.9 11.4 140 385-527 5-199 (299)
74 3o53_A Protein LRIM1, AGAP0063 100.0 1.8E-29 6.1E-34 250.3 9.4 254 66-339 14-270 (317)
75 1wwl_A Monocyte differentiatio 100.0 8.9E-30 3E-34 251.9 6.7 222 93-321 65-310 (312)
76 1wwl_A Monocyte differentiatio 100.0 1.7E-29 5.7E-34 249.9 7.9 246 87-343 39-308 (312)
77 1z7x_W Ribonuclease inhibitor; 100.0 4.3E-30 1.5E-34 268.1 2.9 326 18-344 25-411 (461)
78 3v5w_A G-protein coupled recep 100.0 1.7E-28 5.8E-33 260.1 13.6 137 383-527 187-359 (689)
79 3g06_A SSPH2 (leucine-rich rep 100.0 5.6E-27 1.9E-31 251.2 23.2 267 23-334 42-311 (622)
80 3o53_A Protein LRIM1, AGAP0063 99.9 2.2E-28 7.5E-33 242.5 9.2 245 28-291 18-270 (317)
81 3oja_A Leucine-rich immune mol 99.9 8.1E-28 2.8E-32 252.2 13.5 235 89-338 32-269 (487)
82 2z62_A TOLL-like receptor 4, v 99.9 7.9E-27 2.7E-31 226.5 18.2 207 117-324 29-241 (276)
83 4f9c_A Cell division cycle 7-r 99.9 1.4E-27 4.8E-32 239.8 12.8 120 381-507 17-169 (361)
84 3oja_A Leucine-rich immune mol 99.9 1.7E-27 5.8E-32 249.8 11.3 228 45-291 35-270 (487)
85 4b99_A Mitogen-activated prote 99.9 3.8E-27 1.3E-31 239.3 12.1 138 385-527 54-231 (398)
86 2z62_A TOLL-like receptor 4, v 99.9 1E-25 3.4E-30 218.7 19.4 205 91-297 28-238 (276)
87 3g06_A SSPH2 (leucine-rich rep 99.9 8.4E-25 2.9E-29 234.3 27.2 255 44-344 40-297 (622)
88 2o6q_A Variable lymphocyte rec 99.9 3E-25 1E-29 214.7 20.8 204 92-322 17-220 (270)
89 2o6q_A Variable lymphocyte rec 99.9 3.6E-25 1.2E-29 214.2 20.7 202 63-296 17-218 (270)
90 1p9a_G Platelet glycoprotein I 99.9 2.6E-25 9E-30 217.2 19.2 204 87-321 6-209 (290)
91 1z7x_W Ribonuclease inhibitor; 99.9 4.3E-28 1.5E-32 252.9 -1.1 321 22-344 4-383 (461)
92 3uto_A Twitchin; kinase, muscl 99.9 6.9E-26 2.4E-30 241.1 12.9 138 384-527 156-325 (573)
93 4aw2_A Serine/threonine-protei 99.9 8.5E-26 2.9E-30 232.8 13.0 147 377-527 66-245 (437)
94 3rfs_A Internalin B, repeat mo 99.9 2.5E-25 8.4E-30 215.5 15.2 205 117-332 42-247 (272)
95 4glp_A Monocyte differentiatio 99.9 2.1E-25 7.3E-30 220.2 13.8 225 91-321 64-308 (310)
96 2vd5_A DMPK protein; serine/th 99.9 1.6E-25 5.4E-30 229.2 12.7 147 377-527 53-232 (412)
97 3e7e_A HBUB1, BUB1A, mitotic c 99.9 1.7E-25 5.9E-30 226.1 12.5 143 382-527 62-254 (365)
98 2xwt_C Thyrotropin receptor; s 99.9 1.1E-24 3.9E-29 206.6 16.9 196 92-317 32-236 (239)
99 3rfs_A Internalin B, repeat mo 99.9 8.9E-25 3E-29 211.6 16.3 210 88-309 38-248 (272)
100 1p9a_G Platelet glycoprotein I 99.9 2.8E-24 9.4E-29 210.0 18.2 203 136-344 6-208 (290)
101 2xwt_C Thyrotropin receptor; s 99.9 5.9E-25 2E-29 208.6 12.8 196 117-338 32-233 (239)
102 3v8s_A RHO-associated protein 99.9 7E-25 2.4E-29 224.2 12.2 144 378-527 62-238 (410)
103 3txo_A PKC-L, NPKC-ETA, protei 99.9 1.5E-24 5.2E-29 217.8 12.5 139 383-527 21-193 (353)
104 3uim_A Brassinosteroid insensi 99.9 3.6E-24 1.2E-28 212.9 14.0 155 372-527 17-204 (326)
105 4ay9_X Follicle-stimulating ho 99.9 8.6E-24 2.9E-28 212.3 16.2 239 67-318 14-257 (350)
106 4dc2_A Protein kinase C IOTA t 99.9 3.5E-24 1.2E-28 217.9 13.3 139 383-527 50-222 (396)
107 1xjd_A Protein kinase C, theta 99.9 3.9E-24 1.3E-28 214.0 13.2 141 381-527 13-187 (345)
108 1o6l_A RAC-beta serine/threoni 99.9 4.6E-24 1.6E-28 212.9 13.5 138 384-527 4-174 (337)
109 2qkw_B Protein kinase; three-h 99.9 2.3E-24 7.9E-29 213.8 11.0 152 373-527 27-210 (321)
110 2i0e_A Protein kinase C-beta I 99.9 3.9E-24 1.3E-28 214.7 12.5 139 383-527 18-190 (353)
111 3m19_A Variable lymphocyte rec 99.9 3E-23 1E-27 198.4 18.0 179 118-322 16-194 (251)
112 1h6u_A Internalin H; cell adhe 99.9 3.2E-23 1.1E-27 204.3 18.7 191 117-322 42-232 (308)
113 2ca6_A RAN GTPase-activating p 99.9 1.3E-25 4.6E-30 228.7 1.4 238 86-324 27-320 (386)
114 3p1a_A MYT1 kinase, membrane-a 99.9 1.7E-24 6E-29 213.8 9.0 136 385-527 57-225 (311)
115 3fe3_A MAP/microtubule affinit 99.9 5.2E-24 1.8E-28 211.8 12.4 139 382-527 12-182 (328)
116 2psq_A Fibroblast growth facto 99.9 5.4E-24 1.8E-28 215.4 12.7 141 384-527 80-274 (370)
117 3goz_A Leucine-rich repeat-con 99.9 3.1E-25 1.1E-29 224.0 3.5 237 91-327 22-304 (362)
118 3goz_A Leucine-rich repeat-con 99.9 4.7E-25 1.6E-29 222.6 4.3 249 95-344 2-297 (362)
119 2ast_B S-phase kinase-associat 99.9 3.8E-25 1.3E-29 220.8 3.5 229 92-328 71-314 (336)
120 3soc_A Activin receptor type-2 99.9 9.3E-24 3.2E-28 209.6 13.0 140 382-527 21-202 (322)
121 2r5t_A Serine/threonine-protei 99.9 9E-24 3.1E-28 213.6 13.1 139 383-527 36-208 (373)
122 1fot_A TPK1 delta, CAMP-depend 99.9 1.3E-23 4.4E-28 208.0 13.7 135 384-527 5-172 (318)
123 3zgw_A Maternal embryonic leuc 99.9 1E-23 3.5E-28 211.0 12.6 140 383-527 8-178 (347)
124 3s95_A LIMK-1, LIM domain kina 99.9 1.8E-23 6.3E-28 206.2 14.0 141 384-527 9-191 (310)
125 3fxz_A Serine/threonine-protei 99.9 1.9E-23 6.6E-28 204.9 14.1 137 384-527 19-185 (297)
126 3a8x_A Protein kinase C IOTA t 99.9 1.2E-23 4.2E-28 210.6 12.8 138 384-527 8-179 (345)
127 3cbl_A C-FES, proto-oncogene t 99.9 7.4E-24 2.5E-28 215.0 11.1 142 383-527 112-284 (377)
128 3g2f_A Bone morphogenetic prot 99.9 2.2E-23 7.4E-28 208.1 14.1 139 383-527 11-197 (336)
129 3pfq_A PKC-B, PKC-beta, protei 99.9 1.7E-23 5.8E-28 227.4 14.4 140 382-527 338-511 (674)
130 4fr4_A YANK1, serine/threonine 99.9 1.4E-23 4.8E-28 212.7 12.5 137 384-527 14-183 (384)
131 3kul_A Ephrin type-A receptor 99.9 1.7E-23 5.8E-28 208.0 12.8 141 384-527 48-223 (325)
132 1rdq_E PKA C-alpha, CAMP-depen 99.9 1.8E-23 6E-28 209.9 12.9 135 384-527 40-207 (350)
133 3tki_A Serine/threonine-protei 99.9 7.2E-24 2.5E-28 210.5 10.0 140 384-527 6-176 (323)
134 2c30_A Serine/threonine-protei 99.9 2.4E-23 8.3E-28 206.5 13.6 148 373-527 23-210 (321)
135 2ca6_A RAN GTPase-activating p 99.9 1.6E-24 5.4E-29 220.7 5.1 243 36-298 24-318 (386)
136 1h6u_A Internalin H; cell adhe 99.9 8.5E-23 2.9E-27 201.3 17.0 194 88-297 38-231 (308)
137 3m19_A Variable lymphocyte rec 99.9 1.4E-22 4.8E-27 193.7 18.0 178 92-273 15-193 (251)
138 2acx_A G protein-coupled recep 99.9 2.1E-23 7.1E-28 220.4 13.2 139 383-527 182-354 (576)
139 4glp_A Monocyte differentiatio 99.9 1.4E-23 4.8E-28 207.2 11.1 222 117-343 65-306 (310)
140 3sxs_A Cytoplasmic tyrosine-pr 99.9 2.5E-23 8.6E-28 200.7 12.6 141 383-527 6-174 (268)
141 3vhe_A Vascular endothelial gr 99.9 1.2E-23 4.2E-28 211.9 10.5 150 375-527 12-264 (359)
142 3niz_A Rhodanese family protei 99.9 3.5E-23 1.2E-27 204.4 12.9 138 384-527 20-188 (311)
143 2nru_A Interleukin-1 receptor- 99.9 8.3E-23 2.8E-27 201.1 15.4 152 372-527 12-204 (307)
144 1tki_A Titin; serine kinase, m 99.9 4.1E-23 1.4E-27 204.8 13.1 138 384-527 4-172 (321)
145 4hcu_A Tyrosine-protein kinase 99.9 2E-23 6.7E-28 201.6 10.3 140 384-527 9-176 (269)
146 1vzo_A Ribosomal protein S6 ki 99.9 2.4E-23 8.1E-28 209.5 11.3 139 384-527 53-229 (355)
147 3q4u_A Activin receptor type-1 99.9 3.8E-23 1.3E-27 202.8 12.5 141 384-527 7-186 (301)
148 4ejn_A RAC-alpha serine/threon 99.9 2.3E-23 8E-28 216.2 11.5 139 383-527 146-318 (446)
149 2qol_A Ephrin receptor; recept 99.9 1.8E-23 6.2E-28 211.7 10.4 141 384-527 44-219 (373)
150 4eqm_A Protein kinase; transfe 99.9 3.6E-23 1.2E-27 202.6 12.1 138 385-527 11-181 (294)
151 3c4z_A Rhodopsin kinase; Ser/T 99.9 4.1E-23 1.4E-27 217.6 13.2 139 384-527 184-358 (543)
152 2izr_A Casein kinase I isoform 99.9 4E-23 1.4E-27 205.7 12.4 140 384-527 8-186 (330)
153 3lb7_A RAF proto-oncogene seri 99.9 4.3E-23 1.5E-27 203.4 12.3 141 382-527 33-203 (307)
154 2ast_B S-phase kinase-associat 99.9 1.2E-23 4E-28 210.0 8.2 244 92-343 48-305 (336)
155 3kex_A Receptor tyrosine-prote 99.9 3.7E-23 1.3E-27 205.6 11.7 141 384-527 12-186 (325)
156 2vuw_A Serine/threonine-protei 99.9 1.3E-23 4.4E-28 209.9 8.0 132 384-527 19-246 (336)
157 3p86_A Serine/threonine-protei 99.9 3.1E-23 1.1E-27 204.5 10.7 142 380-527 32-208 (309)
158 3a62_A Ribosomal protein S6 ki 99.9 3.9E-23 1.3E-27 205.5 11.5 138 384-527 16-190 (327)
159 1csn_A Casein kinase-1; phosph 99.9 1.1E-22 3.7E-27 199.3 14.4 140 384-527 9-187 (298)
160 3tt0_A Basic fibroblast growth 99.9 5.4E-23 1.8E-27 209.1 12.6 141 384-527 68-262 (382)
161 3op5_A Serine/threonine-protei 99.9 3.3E-23 1.1E-27 209.3 10.8 140 384-527 34-230 (364)
162 3gen_A Tyrosine-protein kinase 99.9 3.5E-23 1.2E-27 201.4 10.2 142 382-527 21-190 (283)
163 1ob3_A PFPK5, cell division co 99.9 3.9E-23 1.3E-27 201.7 10.5 137 385-527 2-169 (288)
164 1rjb_A FL cytokine receptor; k 99.9 6.7E-23 2.3E-27 205.2 12.2 144 381-527 41-243 (344)
165 3qd2_B Eukaryotic translation 99.9 7.4E-23 2.5E-27 203.5 12.4 141 384-527 5-245 (332)
166 3l9p_A Anaplastic lymphoma kin 99.9 1.9E-23 6.7E-28 211.1 8.2 141 384-527 70-255 (367)
167 1nxk_A MAP kinase-activated pr 99.9 6.8E-23 2.3E-27 209.4 12.2 138 384-527 60-232 (400)
168 3o0g_A Cell division protein k 99.9 1.2E-22 4.1E-27 198.6 13.3 137 385-527 2-170 (292)
169 1luf_A Muscle-specific tyrosin 99.9 3.6E-23 1.2E-27 207.0 9.7 144 381-527 43-245 (343)
170 2yab_A Death-associated protei 99.9 1.2E-22 4.2E-27 204.4 13.5 137 384-527 11-187 (361)
171 3ugc_A Tyrosine-protein kinase 99.9 4.5E-23 1.5E-27 201.9 9.7 141 384-527 9-186 (295)
172 3mdy_A Bone morphogenetic prot 99.9 9E-23 3.1E-27 203.5 12.0 138 384-527 36-215 (337)
173 4hgt_A Casein kinase I isoform 99.9 1.7E-22 5.7E-27 197.7 13.4 141 383-527 7-184 (296)
174 3h4j_B AMPK kdaid, SNF1-like p 99.9 9.3E-23 3.2E-27 203.2 11.6 137 383-527 7-176 (336)
175 1kob_A Twitchin; kinase, intra 99.9 1.6E-22 5.5E-27 205.5 13.4 138 384-527 50-219 (387)
176 2zmd_A Dual specificity protei 99.9 1.5E-22 5.2E-27 206.2 13.2 137 385-527 56-225 (390)
177 2y94_A 5'-AMP-activated protei 99.9 1.4E-22 4.8E-27 210.9 13.0 137 384-527 15-184 (476)
178 4ay9_X Follicle-stimulating ho 99.9 3.8E-22 1.3E-26 200.3 15.5 236 94-339 12-254 (350)
179 3sv0_A Casein kinase I-like; t 99.9 1.8E-22 6E-27 210.6 13.5 140 384-527 6-182 (483)
180 4euu_A Serine/threonine-protei 99.9 1.6E-22 5.6E-27 200.3 12.6 137 385-527 9-184 (319)
181 2pvf_A Fibroblast growth facto 99.9 1.7E-22 5.8E-27 201.6 12.7 141 384-527 34-228 (334)
182 3dbq_A Dual specificity protei 99.9 1E-22 3.5E-27 203.9 11.2 138 384-527 8-178 (343)
183 3mtl_A Cell division protein k 99.9 1.7E-22 5.8E-27 200.6 12.5 137 385-527 2-169 (324)
184 3uc3_A Serine/threonine-protei 99.9 1.3E-22 4.6E-27 204.5 11.7 137 384-527 19-186 (361)
185 1qcf_A Haematopoetic cell kina 99.9 4.1E-23 1.4E-27 214.8 8.1 144 380-527 183-354 (454)
186 2ivs_A Proto-oncogene tyrosine 99.9 1.5E-22 5.1E-27 199.8 11.4 142 383-527 21-221 (314)
187 1t46_A HOMO sapiens V-KIT hard 99.9 1.5E-22 5E-27 199.8 11.2 141 384-527 22-216 (313)
188 2pmi_A Negative RE, cyclin-dep 99.9 2.6E-22 8.9E-27 198.7 12.9 138 384-527 4-177 (317)
189 2xir_A Vascular endothelial gr 99.9 1.2E-22 4E-27 200.8 10.4 150 375-527 17-219 (316)
190 3c0i_A Peripheral plasma membr 99.9 2E-22 6.9E-27 202.4 12.3 138 385-527 24-202 (351)
191 3soa_A Calcium/calmodulin-depe 99.9 2.2E-22 7.4E-27 208.0 12.8 138 384-527 10-182 (444)
192 3ork_A Serine/threonine protei 99.9 8E-23 2.7E-27 201.8 9.2 140 384-527 11-188 (311)
193 1p4o_A Insulin-like growth fac 99.9 6.5E-23 2.2E-27 203.3 8.6 146 379-527 19-209 (322)
194 3oz6_A Mitogen-activated prote 99.9 1.9E-22 6.4E-27 205.6 12.1 139 383-527 7-199 (388)
195 3poz_A Epidermal growth factor 99.9 7.4E-23 2.5E-27 203.6 8.8 140 385-527 15-188 (327)
196 2qr7_A Ribosomal protein S6 ki 99.9 1.8E-22 6.2E-27 201.8 11.7 138 384-527 21-189 (342)
197 3uzp_A CKI-delta, CKID, casein 99.9 3E-22 1E-26 195.9 12.9 140 384-527 8-184 (296)
198 3og7_A AKAP9-BRAF fusion prote 99.9 1E-22 3.5E-27 198.8 9.4 139 384-527 23-191 (289)
199 2zv2_A Calcium/calmodulin-depe 99.9 2.2E-22 7.5E-27 197.3 11.7 138 383-527 11-206 (298)
200 3llt_A Serine/threonine kinase 99.9 2.4E-22 8.1E-27 202.6 12.3 146 373-527 23-228 (360)
201 4e5w_A Tyrosine-protein kinase 99.9 2.4E-22 8.4E-27 197.2 12.0 140 385-527 21-198 (302)
202 3cok_A Serine/threonine-protei 99.9 3.4E-22 1.2E-26 193.8 12.7 140 383-527 9-181 (278)
203 3lxl_A Tyrosine-protein kinase 99.9 2.5E-22 8.5E-27 199.7 11.6 140 385-527 23-199 (327)
204 1opk_A P150, C-ABL, proto-onco 99.9 1.7E-22 5.7E-27 212.3 10.6 142 382-527 217-388 (495)
205 2w4o_A Calcium/calmodulin-depe 99.9 3.3E-22 1.1E-26 200.7 12.1 138 383-527 51-219 (349)
206 3g33_A Cell division protein k 99.9 7E-22 2.4E-26 194.7 14.3 137 384-527 8-188 (308)
207 1mp8_A Focal adhesion kinase 1 99.9 1.4E-22 4.9E-27 196.9 9.1 141 383-527 13-186 (281)
208 2y0a_A Death-associated protei 99.9 6.2E-22 2.1E-26 196.8 13.7 136 385-527 11-186 (326)
209 2bdw_A Hypothetical protein K1 99.9 2.9E-22 9.8E-27 202.1 11.4 137 384-527 28-199 (362)
210 1qpc_A LCK kinase; alpha beta 99.9 1.6E-22 5.4E-27 196.3 9.2 143 381-527 9-179 (279)
211 2x4f_A Myosin light chain kina 99.9 3.1E-22 1E-26 202.7 11.6 133 389-527 93-257 (373)
212 3qup_A Tyrosine-protein kinase 99.9 1.5E-22 5.2E-27 200.8 9.0 144 381-527 19-208 (323)
213 3rp9_A Mitogen-activated prote 99.9 2.9E-22 9.8E-27 208.8 11.4 119 384-507 52-207 (458)
214 3t9t_A Tyrosine-protein kinase 99.9 2E-22 6.7E-27 194.2 9.4 140 384-527 7-174 (267)
215 3n9x_A Phosphotransferase; mal 99.9 4.1E-22 1.4E-26 205.8 12.1 139 384-527 25-220 (432)
216 3c1x_A Hepatocyte growth facto 99.9 3.2E-22 1.1E-26 202.4 11.0 139 386-527 90-265 (373)
217 3cvr_A Invasion plasmid antige 99.9 9.6E-22 3.3E-26 208.2 14.7 188 92-331 60-254 (571)
218 3f66_A Hepatocyte growth facto 99.9 5.5E-22 1.9E-26 194.4 11.9 140 385-527 25-201 (298)
219 3kn6_A Ribosomal protein S6 ki 99.9 5.5E-22 1.9E-26 197.1 12.0 132 390-527 16-178 (325)
220 2o6s_A Variable lymphocyte rec 99.9 1.3E-21 4.3E-26 181.4 13.6 178 66-258 11-188 (208)
221 3dls_A PAS domain-containing s 99.9 6.2E-22 2.1E-26 197.5 12.2 137 384-527 23-198 (335)
222 1x8b_A WEE1HU, WEE1-like prote 99.9 5.4E-22 1.8E-26 193.0 11.5 135 384-527 10-199 (289)
223 1u5q_A Serine/threonine protei 99.9 5E-22 1.7E-26 199.2 11.5 133 385-527 54-219 (348)
224 3gni_B Strad alpha; kinase fol 99.9 6.3E-22 2.2E-26 201.7 12.3 144 381-527 21-204 (389)
225 3q60_A ROP5B; pseudokinase, tr 99.9 1.9E-22 6.3E-27 204.3 8.3 135 384-527 61-260 (371)
226 4eut_A Serine/threonine-protei 99.9 3.7E-22 1.3E-26 203.8 10.2 137 385-527 9-184 (396)
227 1k9a_A Carboxyl-terminal SRC k 99.9 7.1E-22 2.4E-26 205.1 12.3 137 382-527 190-355 (450)
228 2y7j_A Phosphorylase B kinase 99.9 1E-21 3.5E-26 198.4 13.0 137 384-527 93-268 (365)
229 3gxj_A TGF-beta receptor type- 99.9 6.4E-23 2.2E-27 201.3 4.1 140 385-527 3-181 (303)
230 3fdn_A Serine/threonine-protei 99.9 8.3E-22 2.8E-26 191.2 11.9 137 383-527 7-176 (279)
231 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 2.3E-22 7.9E-27 209.0 8.5 142 382-527 181-350 (452)
232 3mi9_A Cell division protein k 99.9 8.5E-22 2.9E-26 197.8 12.3 140 384-527 16-197 (351)
233 2i1m_A Macrophage colony-stimu 99.9 4.4E-22 1.5E-26 198.3 10.1 144 381-527 42-235 (333)
234 3kfa_A Tyrosine-protein kinase 99.9 2.7E-22 9.1E-27 195.5 8.3 144 380-527 8-181 (288)
235 2o6s_A Variable lymphocyte rec 99.9 2.4E-21 8.2E-26 179.5 14.1 180 94-307 10-189 (208)
236 4agu_A Cyclin-dependent kinase 99.9 9.4E-22 3.2E-26 193.9 11.8 138 384-527 2-171 (311)
237 3lzb_A Epidermal growth factor 99.9 5.2E-22 1.8E-26 197.4 10.1 141 384-527 14-188 (327)
238 1mqb_A Ephrin type-A receptor 99.9 8E-22 2.7E-26 196.6 11.3 141 384-527 43-219 (333)
239 2v62_A Serine/threonine-protei 99.9 3.1E-22 1.1E-26 200.6 8.3 138 385-527 37-229 (345)
240 3an0_A Dual specificity mitoge 99.9 4.5E-22 1.5E-26 198.9 9.4 140 381-527 47-222 (340)
241 1ua2_A CAK, cell division prot 99.9 6.7E-22 2.3E-26 198.2 10.6 139 383-527 8-181 (346)
242 1zy4_A Serine/threonine-protei 99.9 1E-21 3.5E-26 192.5 11.6 141 384-527 5-199 (303)
243 3fme_A Dual specificity mitoge 99.9 5.4E-22 1.8E-26 193.5 9.4 138 383-527 5-178 (290)
244 2yex_A Serine/threonine-protei 99.9 5.6E-22 1.9E-26 191.9 9.4 140 384-527 6-176 (276)
245 3byv_A Rhoptry kinase; malaria 99.9 6.5E-22 2.2E-26 200.7 10.3 134 384-527 72-271 (377)
246 3eb0_A Putative uncharacterize 99.9 1.8E-21 6.1E-26 197.9 13.4 139 382-527 4-210 (383)
247 2ac3_A MAP kinase-interacting 99.9 1.6E-21 5.6E-26 192.7 12.8 139 385-527 12-190 (316)
248 4fvq_A Tyrosine-protein kinase 99.9 3.8E-22 1.3E-26 194.6 8.0 135 384-527 7-186 (289)
249 3cvr_A Invasion plasmid antige 99.9 8.9E-22 3E-26 208.4 11.5 188 63-283 60-254 (571)
250 3ttj_A Mitogen-activated prote 99.9 9.7E-22 3.3E-26 204.6 11.5 135 383-527 60-232 (464)
251 2jii_A Serine/threonine-protei 99.9 7.2E-22 2.5E-26 198.5 10.2 139 385-527 42-237 (352)
252 4f0f_A Serine/threonine-protei 99.9 2.2E-21 7.5E-26 189.0 13.2 136 384-527 18-195 (287)
253 2vx3_A Dual specificity tyrosi 99.9 2.3E-21 8E-26 197.0 13.9 138 383-527 52-227 (382)
254 2a19_B Interferon-induced, dou 99.9 1E-21 3.5E-26 190.9 10.7 137 385-527 11-190 (284)
255 3i6u_A CDS1, serine/threonine- 99.9 1E-21 3.5E-26 202.1 11.3 137 384-527 134-310 (419)
256 2w1i_A JAK2; chromosomal rearr 99.9 1.5E-21 5E-26 194.0 12.1 141 384-527 40-217 (326)
257 3is5_A Calcium-dependent prote 99.9 9.5E-22 3.3E-26 191.5 10.4 137 385-527 22-195 (285)
258 3fhr_A MAP kinase-activated pr 99.9 1.5E-21 5.2E-26 194.8 12.0 137 384-527 27-198 (336)
259 1cm8_A Phosphorylated MAP kina 99.9 1.7E-21 5.9E-26 196.8 12.5 133 384-527 24-194 (367)
260 3pg1_A Mitogen-activated prote 99.9 2E-21 6.7E-26 196.0 12.9 144 377-527 14-202 (362)
261 1u59_A Tyrosine-protein kinase 99.9 1.5E-21 5E-26 190.4 11.5 141 384-527 8-182 (287)
262 2eue_A Carbon catabolite derep 99.9 1.4E-21 4.8E-26 189.2 11.2 136 384-527 12-180 (275)
263 2a2a_A Death-associated protei 99.9 1.7E-21 5.7E-26 193.2 12.0 136 385-527 12-187 (321)
264 3cc6_A Protein tyrosine kinase 99.9 1.1E-21 3.7E-26 190.7 10.3 141 383-527 10-183 (281)
265 3com_A Serine/threonine-protei 99.9 2.1E-21 7E-26 191.8 12.2 139 384-527 28-194 (314)
266 3ogk_B Coronatine-insensitive 99.9 3E-22 1E-26 215.4 6.7 226 117-343 271-525 (592)
267 3f3z_A Calcium/calmodulin-depe 99.9 2.3E-21 7.8E-26 187.9 12.2 136 385-527 9-177 (277)
268 3kvw_A DYRK2, dual specificity 99.9 1.9E-21 6.6E-26 200.5 12.4 135 384-527 96-268 (429)
269 3mwu_A Calmodulin-domain prote 99.9 1.6E-21 5.5E-26 204.6 11.9 136 385-527 22-192 (486)
270 3brb_A Proto-oncogene tyrosine 99.8 1.1E-21 3.8E-26 193.6 10.0 145 380-527 29-218 (313)
271 2h6d_A 5'-AMP-activated protei 99.8 2.5E-21 8.6E-26 187.4 12.2 138 383-527 9-179 (276)
272 2x7f_A TRAF2 and NCK-interacti 99.8 9.9E-22 3.4E-26 195.1 9.5 148 375-527 14-198 (326)
273 3kk8_A Calcium/calmodulin depe 99.8 3.4E-21 1.2E-25 187.3 13.1 137 384-527 5-176 (284)
274 2yfx_A Tyrosine-protein kinase 99.8 9.7E-22 3.3E-26 195.4 9.3 141 384-527 29-214 (327)
275 3lij_A Calcium/calmodulin depe 99.8 2.7E-21 9.3E-26 203.3 13.2 136 385-527 37-207 (494)
276 3kmu_A ILK, integrin-linked ki 99.8 3.2E-21 1.1E-25 185.8 12.6 133 384-527 9-177 (271)
277 2h8h_A Proto-oncogene tyrosine 99.8 5E-22 1.7E-26 210.6 7.5 143 381-527 263-433 (535)
278 2ozo_A Tyrosine-protein kinase 99.8 1.1E-21 3.6E-26 211.2 10.0 140 385-527 335-508 (613)
279 2vwi_A Serine/threonine-protei 99.8 1.3E-21 4.6E-26 191.9 9.8 143 382-527 12-195 (303)
280 3pls_A Macrophage-stimulating 99.8 2E-21 6.8E-26 190.2 11.0 138 387-527 23-197 (298)
281 1z57_A Dual specificity protei 99.8 4E-21 1.4E-25 191.5 13.3 135 384-527 13-203 (339)
282 1b6c_B TGF-B superfamily recep 99.8 2E-21 6.8E-26 194.2 11.1 141 384-527 41-220 (342)
283 2vgo_A Serine/threonine-protei 99.8 3.9E-21 1.3E-25 186.9 12.8 136 384-527 13-181 (284)
284 2rku_A Serine/threonine-protei 99.8 3.8E-21 1.3E-25 188.0 12.7 138 384-527 14-184 (294)
285 3lxp_A Non-receptor tyrosine-p 99.8 4E-21 1.4E-25 190.2 12.9 136 387-527 33-206 (318)
286 3a7i_A MST3 kinase, serine/thr 99.8 4E-21 1.4E-25 188.7 12.8 136 385-527 22-188 (303)
287 3nsz_A CK II alpha, casein kin 99.8 3.7E-21 1.3E-25 191.3 12.6 134 384-527 35-199 (330)
288 2eva_A TAK1 kinase - TAB1 chim 99.8 2.7E-21 9.1E-26 190.5 11.5 138 384-527 7-172 (307)
289 3dtc_A Mitogen-activated prote 99.8 2.1E-21 7.2E-26 187.4 10.5 134 384-527 6-183 (271)
290 2owb_A Serine/threonine-protei 99.8 3.7E-21 1.3E-25 191.9 12.3 138 384-527 40-210 (335)
291 3cek_A Dual specificity protei 99.8 1.3E-21 4.6E-26 193.1 8.9 147 375-527 18-197 (313)
292 3lm5_A Serine/threonine-protei 99.8 2E-21 6.7E-26 193.2 10.0 137 385-527 28-202 (327)
293 2h34_A Serine/threonine-protei 99.8 2.6E-21 8.8E-26 190.8 10.7 140 383-527 32-204 (309)
294 1j1b_A Glycogen synthase kinas 99.8 4.5E-21 1.6E-25 197.2 13.0 136 385-527 54-225 (420)
295 4aaa_A Cyclin-dependent kinase 99.8 2E-21 6.8E-26 193.5 10.0 139 383-527 23-193 (331)
296 3hko_A Calcium/calmodulin-depe 99.8 1.5E-21 5E-26 195.5 9.1 144 381-527 22-243 (345)
297 3gbz_A Kinase, CMGC CDK; ssgci 99.8 1.6E-21 5.6E-26 194.0 9.2 140 381-527 30-206 (329)
298 3q5i_A Protein kinase; CDPK, m 99.8 5.5E-21 1.9E-25 201.4 13.7 137 384-527 35-217 (504)
299 4e7w_A Glycogen synthase kinas 99.8 4E-21 1.4E-25 196.0 12.1 137 385-527 40-210 (394)
300 3bhy_A Death-associated protei 99.8 5.2E-21 1.8E-25 185.9 12.3 136 385-527 5-180 (283)
301 4azs_A Methyltransferase WBDD; 99.8 5.9E-22 2E-26 210.8 6.0 127 392-527 241-408 (569)
302 3nyv_A Calmodulin-domain prote 99.8 2.3E-21 8E-26 203.3 10.5 136 385-527 26-197 (484)
303 3eqc_A Dual specificity mitoge 99.8 1.8E-21 6.1E-26 196.2 9.2 136 384-527 32-199 (360)
304 3ogk_B Coronatine-insensitive 99.8 7.2E-23 2.5E-27 220.2 -1.3 322 19-343 110-500 (592)
305 2j7t_A Serine/threonine-protei 99.8 1.3E-21 4.5E-26 192.0 7.8 139 384-527 18-186 (302)
306 2buj_A Serine/threonine-protei 99.8 3.7E-21 1.3E-25 190.2 11.0 141 384-527 28-212 (317)
307 1t4h_A Serine/threonine-protei 99.8 1.2E-20 4.2E-25 184.0 14.5 133 387-527 28-199 (290)
308 1phk_A Phosphorylase kinase; g 99.8 9.4E-21 3.2E-25 185.5 13.6 137 384-527 16-192 (298)
309 2j0j_A Focal adhesion kinase 1 99.8 2.4E-21 8.3E-26 209.8 10.3 142 382-527 387-561 (656)
310 1blx_A Cyclin-dependent kinase 99.8 5.2E-21 1.8E-25 189.8 11.7 140 381-527 7-188 (326)
311 2wtk_C Serine/threonine-protei 99.8 9.9E-21 3.4E-25 186.0 13.5 140 384-527 4-180 (305)
312 2wqm_A Serine/threonine-protei 99.8 5.1E-21 1.7E-25 188.6 11.4 140 383-527 30-205 (310)
313 2xot_A Amphoterin-induced prot 99.8 1.5E-20 5E-25 189.6 14.9 133 94-230 21-154 (361)
314 1fvr_A Tyrosine-protein kinase 99.8 4.7E-21 1.6E-25 190.4 10.8 137 385-527 25-210 (327)
315 1h6t_A Internalin B; cell adhe 99.8 9.6E-21 3.3E-25 184.9 12.8 189 94-322 27-215 (291)
316 1wak_A Serine/threonine-protei 99.8 5.4E-21 1.9E-25 195.0 11.5 134 385-527 37-262 (397)
317 2r3i_A Cell division protein k 99.8 4.9E-21 1.7E-25 187.6 10.5 138 384-527 2-172 (299)
318 3qyz_A Mitogen-activated prote 99.8 9.4E-21 3.2E-25 191.2 12.8 139 383-527 25-200 (364)
319 2pml_X PFPK7, Ser/Thr protein 99.8 4E-21 1.4E-25 192.6 9.9 136 384-527 30-219 (348)
320 1byg_A CSK, protein (C-termina 99.8 1.7E-21 6E-26 188.8 7.0 136 383-527 19-183 (278)
321 2eu9_A Dual specificity protei 99.8 1.2E-20 3.9E-25 189.5 13.1 135 384-527 18-208 (355)
322 3a99_A Proto-oncogene serine/t 99.8 1E-20 3.6E-25 187.4 12.4 137 383-527 41-217 (320)
323 2w5a_A Serine/threonine-protei 99.8 2.2E-21 7.6E-26 188.1 7.4 139 384-527 5-185 (279)
324 2y4i_B KSR2, HKSR2, kinase sup 99.8 4E-21 1.4E-25 190.1 9.3 144 378-527 26-203 (319)
325 2jam_A Calcium/calmodulin-depe 99.8 6.6E-21 2.3E-25 187.3 10.7 135 385-527 9-176 (304)
326 2clq_A Mitogen-activated prote 99.8 1.4E-20 4.8E-25 183.9 12.9 138 385-527 22-192 (295)
327 1xbb_A Tyrosine-protein kinase 99.8 5.8E-21 2E-25 186.5 10.0 141 383-527 14-189 (291)
328 1u46_A ACK-1, activated CDC42 99.8 4.6E-21 1.6E-25 187.0 9.0 141 384-527 17-193 (291)
329 2b9h_A MAP kinase FUS3, mitoge 99.8 1.2E-20 4.2E-25 189.3 12.3 138 384-527 10-191 (353)
330 1m9s_A Internalin B; cell inva 99.8 1.3E-20 4.6E-25 201.5 13.2 191 91-297 21-211 (605)
331 3e3p_A Protein kinase, putativ 99.8 1.4E-20 4.9E-25 189.4 12.7 144 379-527 17-200 (360)
332 2xot_A Amphoterin-induced prot 99.8 1.7E-20 5.7E-25 189.1 12.9 156 92-248 40-202 (361)
333 2xrw_A Mitogen-activated prote 99.8 1.2E-20 4E-25 191.0 11.8 134 384-527 24-195 (371)
334 3ll6_A Cyclin G-associated kin 99.8 1.9E-20 6.6E-25 186.4 13.2 141 383-527 26-219 (337)
335 4fl3_A Tyrosine-protein kinase 99.8 4.9E-21 1.7E-25 206.6 9.4 133 391-527 375-541 (635)
336 2ycf_A Serine/threonine-protei 99.8 6.3E-21 2.1E-25 189.1 9.1 136 385-527 10-185 (322)
337 2fst_X Mitogen-activated prote 99.8 4.1E-21 1.4E-25 193.9 7.8 134 383-527 27-198 (367)
338 2v70_A SLIT-2, SLIT homolog 2 99.8 4.4E-20 1.5E-24 172.6 14.1 152 66-226 15-167 (220)
339 3p23_A Serine/threonine-protei 99.8 5.5E-21 1.9E-25 197.1 8.7 140 384-527 23-195 (432)
340 3dzo_A Rhoptry kinase domain; 99.8 5.4E-21 1.8E-25 196.3 8.6 135 383-527 76-276 (413)
341 2pzi_A Probable serine/threoni 99.8 7.9E-21 2.7E-25 207.4 10.3 130 385-527 80-246 (681)
342 1h6t_A Internalin B; cell adhe 99.8 5.7E-20 1.9E-24 179.5 15.3 173 87-297 42-214 (291)
343 3aln_A Dual specificity mitoge 99.8 1.4E-20 4.8E-25 187.0 10.9 137 384-527 21-194 (327)
344 3rgf_A Cyclin-dependent kinase 99.8 8.1E-21 2.8E-25 194.5 8.9 138 386-527 21-204 (405)
345 2v9t_B SLIT homolog 2 protein 99.8 6.9E-20 2.4E-24 171.2 14.2 151 66-225 15-165 (220)
346 1m9s_A Internalin B; cell inva 99.8 5.6E-20 1.9E-24 196.7 15.3 190 66-276 25-214 (605)
347 4exu_A Mitogen-activated prote 99.8 2.1E-20 7.1E-25 189.2 10.6 132 384-527 41-210 (371)
348 2dyl_A Dual specificity mitoge 99.8 1.4E-20 4.8E-25 186.0 9.1 139 382-527 22-193 (318)
349 1dce_A Protein (RAB geranylger 99.8 2.3E-22 8E-27 213.8 -4.3 120 214-337 443-566 (567)
350 2iwi_A Serine/threonine-protei 99.8 2.2E-20 7.4E-25 184.3 10.0 137 383-527 29-207 (312)
351 2v70_A SLIT-2, SLIT homolog 2 99.8 1E-19 3.4E-24 170.1 13.9 156 143-324 14-170 (220)
352 1dce_A Protein (RAB geranylger 99.8 2.1E-22 7.3E-27 214.1 -5.1 204 88-314 346-567 (567)
353 2i6l_A Mitogen-activated prote 99.8 3.8E-20 1.3E-24 182.9 11.4 138 384-527 10-193 (320)
354 2v9t_B SLIT homolog 2 protein 99.8 1.3E-19 4.4E-24 169.4 14.3 153 143-321 14-166 (220)
355 2rio_A Serine/threonine-protei 99.8 1.9E-20 6.3E-25 193.5 9.4 137 387-527 17-201 (434)
356 1q8y_A SR protein kinase; tran 99.8 3.3E-20 1.1E-24 187.6 10.9 135 384-527 18-204 (373)
357 1xeu_A Internalin C; cellular 99.8 1.2E-20 4E-25 181.5 7.1 168 142-323 21-188 (263)
358 2wei_A Calmodulin-domain prote 99.8 3.6E-20 1.2E-24 180.4 10.2 137 384-527 21-192 (287)
359 3e6j_A Variable lymphocyte rec 99.8 3.3E-19 1.1E-23 167.7 15.6 135 140-274 40-174 (229)
360 2p1m_B Transport inhibitor res 99.8 3.3E-21 1.1E-25 207.3 2.1 322 18-343 102-493 (594)
361 3m2w_A MAP kinase-activated pr 99.8 1E-19 3.4E-24 178.4 12.3 122 384-508 16-172 (299)
362 3coi_A Mitogen-activated prote 99.8 4.3E-20 1.5E-24 185.6 9.0 132 384-527 23-192 (353)
363 3e6j_A Variable lymphocyte rec 99.8 4.1E-19 1.4E-23 167.0 15.1 153 64-226 21-173 (229)
364 3qa8_A MGC80376 protein; kinas 99.8 4.2E-20 1.4E-24 197.3 7.6 138 384-527 13-192 (676)
365 1zar_A RIO2 kinase; serine kin 99.8 1E-19 3.5E-24 176.5 8.6 115 381-507 86-243 (282)
366 4b8c_D Glucose-repressible alc 99.8 4.4E-20 1.5E-24 202.2 6.3 222 91-343 173-403 (727)
367 3en9_A Glycoprotease, O-sialog 99.8 4.6E-20 1.6E-24 195.1 5.7 125 388-527 339-505 (540)
368 4b8c_D Glucose-repressible alc 99.8 2.3E-20 7.9E-25 204.5 2.7 150 98-253 208-359 (727)
369 1xeu_A Internalin C; cellular 99.8 2.9E-19 9.8E-24 171.8 9.6 170 90-298 18-187 (263)
370 3uqc_A Probable conserved tran 99.8 3.6E-19 1.2E-23 173.4 9.8 114 385-504 31-177 (286)
371 2p1m_B Transport inhibitor res 99.8 1.6E-20 5.5E-25 201.9 0.1 319 19-343 128-518 (594)
372 4ezg_A Putative uncharacterize 99.8 2.3E-18 7.9E-23 157.9 13.1 110 184-296 84-194 (197)
373 4ezg_A Putative uncharacterize 99.8 2.8E-18 9.5E-23 157.4 13.5 148 117-271 45-193 (197)
374 3sb4_A Hypothetical leucine ri 99.7 2.8E-18 9.5E-23 170.6 10.6 101 234-336 225-326 (329)
375 3sb4_A Hypothetical leucine ri 99.7 8.5E-18 2.9E-22 167.1 12.9 238 90-339 48-305 (329)
376 1w8a_A SLIT protein; signaling 99.7 6.8E-18 2.3E-22 154.1 9.1 129 94-226 11-140 (192)
377 1w8a_A SLIT protein; signaling 99.7 4.6E-17 1.6E-21 148.6 12.8 131 191-324 11-143 (192)
378 2ell_A Acidic leucine-rich nuc 99.7 1.6E-17 5.3E-22 148.2 9.5 135 91-228 24-163 (168)
379 2ell_A Acidic leucine-rich nuc 99.7 1E-16 3.5E-21 142.9 12.8 133 140-296 24-160 (168)
380 2wfh_A SLIT homolog 2 protein 99.7 2.2E-16 7.7E-21 144.1 13.7 128 191-321 13-140 (193)
381 1zth_A RIO1 serine protein kin 99.7 3.1E-17 1.1E-21 157.0 6.3 113 387-507 49-220 (258)
382 4fdw_A Leucine rich hypothetic 99.7 1.8E-15 6.3E-20 153.8 19.1 258 19-330 111-368 (401)
383 2je0_A Acidic leucine-rich nuc 99.7 1.7E-16 5.9E-21 138.4 9.4 128 140-291 17-148 (149)
384 2je0_A Acidic leucine-rich nuc 99.7 1.1E-16 3.7E-21 139.7 8.0 126 116-243 17-148 (149)
385 4fdw_A Leucine rich hypothetic 99.7 2.5E-15 8.6E-20 152.8 19.3 242 89-343 111-357 (401)
386 2wfh_A SLIT homolog 2 protein 99.7 4.5E-16 1.5E-20 142.1 11.6 128 94-226 13-140 (193)
387 2o6r_A Variable lymphocyte rec 99.6 7.9E-16 2.7E-20 138.4 12.5 133 93-229 9-141 (177)
388 2o6r_A Variable lymphocyte rec 99.6 3E-15 1E-19 134.6 13.7 133 166-324 9-141 (177)
389 1ds9_A Outer arm dynein; leuci 99.6 3.8E-18 1.3E-22 156.6 -6.5 138 136-301 14-158 (198)
390 1a9n_A U2A', U2A'; complex (nu 99.6 4.2E-16 1.4E-20 140.0 6.9 135 86-226 14-154 (176)
391 4gyi_A RIO2 kinase; protein ki 99.6 2.2E-16 7.4E-21 157.4 4.9 111 386-506 96-265 (397)
392 1a9n_A U2A', U2A'; complex (nu 99.6 8.9E-16 3.1E-20 137.9 7.2 133 137-296 16-153 (176)
393 1ds9_A Outer arm dynein; leuci 99.6 1.5E-17 5E-22 152.7 -4.7 129 116-249 18-154 (198)
394 3g39_A Variable lymphocyte rec 99.5 2.6E-14 8.7E-19 127.5 11.5 109 214-324 11-119 (170)
395 2r9u_A Variable lymphocyte rec 99.5 6.2E-14 2.1E-18 125.5 11.5 107 215-323 15-121 (174)
396 3g39_A Variable lymphocyte rec 99.5 5.6E-14 1.9E-18 125.3 10.7 108 118-228 11-118 (170)
397 2r9u_A Variable lymphocyte rec 99.5 7.3E-14 2.5E-18 125.1 10.7 108 119-229 15-122 (174)
398 3un9_A NLR family member X1; l 99.4 1.6E-14 5.4E-19 145.5 -3.8 85 212-296 155-252 (372)
399 4fs7_A Uncharacterized protein 99.3 3.6E-11 1.2E-15 122.2 19.0 290 31-339 58-374 (394)
400 3un9_A NLR family member X1; l 99.3 1.4E-13 4.8E-18 138.6 0.5 187 91-296 72-283 (372)
401 2ifg_A High affinity nerve gro 99.3 3.5E-12 1.2E-16 127.3 10.4 102 193-320 13-116 (347)
402 2ifg_A High affinity nerve gro 99.3 3.5E-12 1.2E-16 127.3 10.3 105 120-227 12-118 (347)
403 4fs7_A Uncharacterized protein 99.2 1.4E-10 4.7E-15 117.9 17.2 298 20-334 70-391 (394)
404 4gt6_A Cell surface protein; l 99.1 3.1E-09 1.1E-13 107.8 17.7 104 232-339 262-365 (394)
405 4gt6_A Cell surface protein; l 99.1 1.9E-08 6.6E-13 101.9 23.1 244 86-339 82-342 (394)
406 4h09_A Hypothetical leucine ri 99.0 1.2E-07 4.1E-12 95.5 25.0 292 21-331 46-356 (379)
407 3tm0_A Aminoglycoside 3'-phosp 98.9 2.7E-09 9.3E-14 101.7 9.5 119 380-505 9-213 (263)
408 2ra8_A Uncharacterized protein 98.9 4.2E-10 1.4E-14 112.3 2.0 64 258-321 251-321 (362)
409 2ra8_A Uncharacterized protein 98.9 2.4E-09 8.1E-14 106.9 6.8 63 281-343 250-319 (362)
410 1nd4_A Aminoglycoside 3'-phosp 98.8 8.6E-09 2.9E-13 97.9 9.4 117 381-506 16-215 (264)
411 4h09_A Hypothetical leucine ri 98.7 7.9E-07 2.7E-11 89.4 20.2 130 205-338 210-340 (379)
412 3dxp_A Putative acyl-COA dehyd 98.5 2.1E-07 7.1E-12 93.0 8.3 114 388-505 41-248 (359)
413 1io0_A Tropomodulin; LRR prote 98.5 6.7E-08 2.3E-12 86.9 3.9 90 87-177 32-136 (185)
414 3rw6_A Nuclear RNA export fact 98.4 3.5E-08 1.2E-12 93.5 1.3 60 117-178 171-234 (267)
415 1io0_A Tropomodulin; LRR prote 98.4 1E-07 3.6E-12 85.6 3.7 91 136-226 32-137 (185)
416 3rw6_A Nuclear RNA export fact 98.4 6.8E-08 2.3E-12 91.5 2.1 104 136-241 137-257 (267)
417 3r70_A Aminoglycoside phosphot 97.9 2.4E-05 8.1E-10 76.6 8.7 114 386-506 38-238 (320)
418 3sg8_A APH(2'')-ID; antibiotic 97.9 2.7E-05 9.3E-10 75.6 8.0 110 390-506 25-224 (304)
419 3e4g_A ATP synthase subunit S, 97.7 1.8E-05 6.1E-10 69.6 3.7 83 141-223 62-150 (176)
420 3tdw_A Gentamicin resistance p 97.6 0.00021 7.3E-09 69.3 10.5 33 474-506 189-225 (306)
421 3e4g_A ATP synthase subunit S, 97.6 3E-05 1E-09 68.1 3.9 82 92-174 62-149 (176)
422 4gkh_A Aminoglycoside 3'-phosp 97.6 0.00055 1.9E-08 64.8 12.1 119 381-505 21-223 (272)
423 3ovc_A Hygromycin-B 4-O-kinase 97.5 0.00034 1.2E-08 69.5 9.4 31 475-505 213-243 (362)
424 2q83_A YTAA protein; 2635576, 97.3 0.00064 2.2E-08 66.7 8.8 32 474-505 221-252 (346)
425 3d1u_A Putative fructosamine-3 97.2 0.0012 4E-08 63.4 9.4 30 388-417 18-47 (288)
426 1pgv_A TMD-1, tropomodulin TMD 97.0 0.00049 1.7E-08 61.5 4.1 63 90-153 40-111 (197)
427 3ats_A Putative uncharacterize 97.0 0.0015 5.2E-08 64.5 8.1 32 474-505 221-252 (357)
428 2olc_A MTR kinase, methylthior 96.8 0.003 1E-07 63.5 8.8 31 474-505 226-256 (397)
429 3rfe_A Platelet glycoprotein I 96.8 0.0021 7.1E-08 53.5 6.2 36 284-319 32-67 (130)
430 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00054 1.9E-08 61.2 2.4 61 117-177 42-111 (197)
431 3rfe_A Platelet glycoprotein I 96.7 0.0023 7.8E-08 53.3 5.5 55 95-152 12-67 (130)
432 3f7w_A Putative fructosamine-3 96.1 0.013 4.5E-07 55.8 8.0 31 387-417 17-47 (288)
433 3jr1_A Putative fructosamine-3 95.9 0.021 7.3E-07 55.1 8.4 111 389-501 40-232 (312)
434 2ppq_A HSK, HK, homoserine kin 95.7 0.033 1.1E-06 53.8 9.4 44 462-505 170-217 (322)
435 3dxq_A Choline/ethanolamine ki 95.7 0.061 2.1E-06 51.5 10.8 31 474-505 172-202 (301)
436 3i1a_A Spectinomycin phosphotr 94.2 0.22 7.5E-06 48.5 10.4 32 474-505 205-236 (339)
437 3g15_A CK, chetk-alpha, cholin 91.9 0.17 5.7E-06 50.7 5.6 29 477-505 246-280 (401)
438 2pyw_A Uncharacterized protein 91.0 0.2 6.8E-06 50.4 5.0 31 474-505 231-261 (420)
439 3csv_A Aminoglycoside phosphot 87.4 0.64 2.2E-05 44.9 5.5 32 474-505 182-217 (333)
440 1zyl_A Hypothetical protein YI 83.5 1 3.6E-05 43.1 4.9 30 474-505 194-223 (328)
441 3c5i_A Choline kinase; choline 77.3 1 3.6E-05 44.1 2.5 31 474-505 211-241 (369)
442 2qg7_A Ethanolamine kinase PV0 76.1 2.3 7.8E-05 43.2 4.7 17 474-490 289-305 (458)
443 1nw1_A Choline kinase (49.2 KD 72.6 1.2 4.3E-05 44.7 1.7 32 474-505 248-307 (429)
444 3feg_A Choline/ethanolamine ki 69.8 2 6.8E-05 42.4 2.4 32 474-505 219-254 (379)
445 3f2s_A CK, chetk-alpha, cholin 67.9 2.2 7.7E-05 42.3 2.3 32 474-505 243-280 (401)
446 3mes_A Choline kinase; malaria 57.5 4.2 0.00014 40.7 2.1 31 474-505 261-291 (424)
447 4ano_A ESSB; membrane protein, 51.0 29 0.001 30.9 6.3 75 424-507 60-135 (219)
448 2lz0_A Uncharacterized protein 41.8 46 0.0016 25.4 5.4 41 131-172 11-51 (100)
449 2lz0_A Uncharacterized protein 32.8 70 0.0024 24.3 5.1 45 152-197 8-52 (100)
450 2pyw_A Uncharacterized protein 32.0 87 0.003 30.7 7.2 25 390-415 39-63 (420)
451 4ann_A ESSB; membrane protein, 27.6 40 0.0014 29.9 3.2 53 450-507 78-130 (215)
452 2yle_A Protein spire homolog 1 20.3 2E+02 0.0067 25.7 6.2 61 437-499 33-93 (229)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.6e-40 Score=368.28 Aligned_cols=325 Identities=31% Similarity=0.446 Sum_probs=270.5
Q ss_pred hcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc-------ccceEEcccccccC-CCCCCc--------
Q 035895 20 CYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS-------IVDELSLSDNYLTS-STPELS-------- 82 (527)
Q Consensus 20 ~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~-------~l~~L~Ls~N~l~~-~~~~~~-------- 82 (527)
|..+..++ ++|++++.+|..|.++++|++|++++|.+.+.+|. .++.|+|++|.+++ .+..+.
T Consensus 293 ~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~ 372 (768)
T 3rgz_A 293 CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLT 372 (768)
T ss_dssp CTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSE
T ss_pred cCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcE
Confidence 56777777 78888888888888888888888888877655552 36677777777763 222110
Q ss_pred -----------ccccCCC--CCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeec
Q 035895 83 -----------FLSSMSN--CKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGG 149 (527)
Q Consensus 83 -----------~~~~~~~--l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 149 (527)
.+..+.. +++|++|++++|++++.+|..+..+. +|+.|++++|.+++..|..+..+++|++|++++
T Consensus 373 L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~ 451 (768)
T 3rgz_A 373 LDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS-ELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWL 451 (768)
T ss_dssp EECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCS
T ss_pred EEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCC-CCCEEECcCCcccCcccHHHhcCCCCCEEECCC
Confidence 0112222 67788888888888888888888775 799999999999888888899999999999999
Q ss_pred CcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCC-Cc
Q 035895 150 NKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTS-IP 228 (527)
Q Consensus 150 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-lp 228 (527)
|++++..|..+..+++|+.|++++|++++.+|..+..+++|++|++++|++++.+|..|+.+++|++|++++|++++ +|
T Consensus 452 n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 531 (768)
T 3rgz_A 452 NMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP 531 (768)
T ss_dssp SCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECC
T ss_pred CcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCC
Confidence 99988888888899999999999999988889899999999999999999998899999999999999999999985 78
Q ss_pred hhhhCCCCccEEEccCCcccccCCccc-----------------------------------------------------
Q 035895 229 SILWNLKDILYLDFWSNLFVGPLPSKI----------------------------------------------------- 255 (527)
Q Consensus 229 ~~~~~l~~L~~l~l~~n~~~~~~p~~~----------------------------------------------------- 255 (527)
..+..+++|+.|++++|.+.+.+|..+
T Consensus 532 ~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 611 (768)
T 3rgz_A 532 AELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRN 611 (768)
T ss_dssp GGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTC
T ss_pred HHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccccc
Confidence 888889999999999988887766543
Q ss_pred -----------------cCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCc
Q 035895 256 -----------------GNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNN 318 (527)
Q Consensus 256 -----------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 318 (527)
+.++.|++|||++|+++|.+|..|+.+++|+.|+|++|+++|.+|..|+.+++|+.|||++|+
T Consensus 612 ~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 612 PCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp CSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred ccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 335678899999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCccchhhhccCCeeEeeeeeeec
Q 035895 319 LSEIIPLSLEKLLYLNILLIVVVILAL 345 (527)
Q Consensus 319 l~~~~p~~~~~l~~L~~L~~~~~~~~~ 345 (527)
++|.+|..+..++.|+.|+++.+.+..
T Consensus 692 l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 692 LDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred ccCcCChHHhCCCCCCEEECcCCcccc
Confidence 999999999999999999999887753
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.4e-40 Score=363.01 Aligned_cols=330 Identities=31% Similarity=0.441 Sum_probs=232.8
Q ss_pred ccccccchhhhcchhccc-CCCceeecCchhhhcC-CCCCEEEcccccccccccc------ccceEEcccccccC-CCCC
Q 035895 10 QLDGGMTGDVCYRICTID-SQNKLVGIVSITIFNL-STLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTS-STPE 80 (527)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~-s~N~l~~~~~~~~~~l-~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~-~~~~ 80 (527)
.+.+..+...+..+..++ ++|++++.+|..+.++ ++|++|+|++|.+.+.+|. .++.|+|++|.+++ ++.
T Consensus 258 ~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~- 336 (768)
T 3rgz_A 258 QFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM- 336 (768)
T ss_dssp CCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCH-
T ss_pred cccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCH-
Confidence 344445555677889999 9999999999888776 9999999999999877664 47899999999984 332
Q ss_pred CcccccCCCCCCCCEEEcccCCCCcccChhHhhcccc--------------------------ccEEEcccCccccccch
Q 035895 81 LSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQS--------------------------LEFIWMSDCNISGGISE 134 (527)
Q Consensus 81 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~--------------------------L~~L~Ls~n~l~~~~~~ 134 (527)
..+..+++|++|++++|++++.+|..+..+..+ |+.|++++|.+++.+|.
T Consensus 337 ----~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~ 412 (768)
T 3rgz_A 337 ----DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP 412 (768)
T ss_dssp ----HHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCG
T ss_pred ----HHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCH
Confidence 125677888888888888877777766655333 45555555555555566
Q ss_pred hhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccC
Q 035895 135 EIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTAL 214 (527)
Q Consensus 135 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 214 (527)
.+..+++|++|++++|++++..|..++.+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++.+|..|+++++|
T Consensus 413 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 492 (768)
T 3rgz_A 413 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNL 492 (768)
T ss_dssp GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred HHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCC
Confidence 66666666666666666666666666666666666666666666666666666777777777777766666667777777
Q ss_pred ceeeCCCCCCCC-CchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhh-------------
Q 035895 215 RNLHLDSNELTS-IPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQ------------- 280 (527)
Q Consensus 215 ~~L~L~~N~l~~-lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------------- 280 (527)
++|++++|++++ +|..+..+++|+.|++++|.+.+.+|..++.+++|++|++++|+++|.+|..+.
T Consensus 493 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~ 572 (768)
T 3rgz_A 493 NWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAG 572 (768)
T ss_dssp CEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCS
T ss_pred CEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhcccc
Confidence 777777777763 666666677777777777777777777777777777777777776665554332
Q ss_pred ---------------------------------------------------------cCCCCCEEEcccccceeecCCCC
Q 035895 281 ---------------------------------------------------------GLKSLQFLSLGHNRLQGSIPNSF 303 (527)
Q Consensus 281 ---------------------------------------------------------~l~~L~~L~L~~N~l~~~~p~~~ 303 (527)
.+++|++|+|++|+++|.+|..|
T Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l 652 (768)
T 3rgz_A 573 KRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEI 652 (768)
T ss_dssp CEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGG
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHH
Confidence 23556677777777777777777
Q ss_pred CCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeee
Q 035895 304 DDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 304 ~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
+.+++|+.|+|++|++++.+|..+..++.|+.|+++.+.+.
T Consensus 653 ~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~ 693 (768)
T 3rgz_A 653 GSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLD 693 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCE
T ss_pred hccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCccc
Confidence 77777777777777777777777777777777777766654
No 3
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.3e-37 Score=322.70 Aligned_cols=319 Identities=19% Similarity=0.202 Sum_probs=252.2
Q ss_pred cchhccc-CCCceeecCchhhhcCCCCCEEEccccccccccc-------cccceEEcccccccCCCCCCcccccCCCCCC
Q 035895 21 YRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS-------SIVDELSLSDNYLTSSTPELSFLSSMSNCKY 92 (527)
Q Consensus 21 ~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~-------~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 92 (527)
..+..+| ++|+++++.|..|.++++|++|++++|.+.+.++ ..++.|+|++|.++...+. .|.++++
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~-----~~~~l~~ 104 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETG-----AFNGLAN 104 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTT-----TTTTCTT
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChh-----hccCccc
Confidence 5677788 8889999888899999999999999998764443 2478899999988876443 5788889
Q ss_pred CCEEEcccCCCCcccChh--HhhccccccEEEcccCccccccchh-hcCCcCCcEEEeecCcccccCcccccCC--CCCC
Q 035895 93 LKKLDISRNPLDGFLPRV--VGNFSQSLEFIWMSDCNISGGISEE-IGNLTDLISIDLGGNKLNGSISITLGKL--QKLQ 167 (527)
Q Consensus 93 L~~L~Ls~N~l~~~~~~~--~~~~~~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~L~ 167 (527)
|++|++++|++++..|.. +..+. +|++|+|++|.+++..|.. +..+++|++|++++|++++..+..+..+ .+|+
T Consensus 105 L~~L~L~~n~l~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~ 183 (455)
T 3v47_A 105 LEVLTLTQCNLDGAVLSGNFFKPLT-SLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFT 183 (455)
T ss_dssp CCEEECTTSCCBTHHHHSSTTTTCT-TCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEE
T ss_pred CCEEeCCCCCCCccccCcccccCcc-cCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccc
Confidence 999999999888744443 65554 7999999999998877765 7888999999999999888777776655 4555
Q ss_pred EEeccCcccccccChh--------hhcCcccCeeeeecccCCCCCCccc-------------------------------
Q 035895 168 FLSFRGNELEGSIPNV--------LCHLAVLFQLDLRGNKLSGSIPTCF------------------------------- 208 (527)
Q Consensus 168 ~L~l~~N~l~~~~p~~--------~~~l~~L~~L~L~~N~l~~~~p~~~------------------------------- 208 (527)
.|++++|.+.+..+.. +..+++|+.|++++|++++..|..+
T Consensus 184 ~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 263 (455)
T 3v47_A 184 LLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKD 263 (455)
T ss_dssp EEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCC
T ss_pred ccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhcc
Confidence 5556555555433222 1234556666666666554333322
Q ss_pred ------cC--CccCceeeCCCCCCCCC-chhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhh
Q 035895 209 ------GN--LTALRNLHLDSNELTSI-PSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTI 279 (527)
Q Consensus 209 ------~~--l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 279 (527)
.. .++|++|++++|+++++ |..+..+++|+.|++++|.+.+..|..|..+++|++|++++|.+.+..|..|
T Consensus 264 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 343 (455)
T 3v47_A 264 PDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMF 343 (455)
T ss_dssp CCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGG
T ss_pred CcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHh
Confidence 11 25799999999999884 6678889999999999999999889999999999999999999988888999
Q ss_pred hcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeeec
Q 035895 280 QGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILAL 345 (527)
Q Consensus 280 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~~ 345 (527)
.++++|++|++++|++++..|..|..+++|++|++++|+++++++..+..++.|+.|+++.+.+..
T Consensus 344 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 409 (455)
T 3v47_A 344 ENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 409 (455)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCccc
Confidence 999999999999999998889999999999999999999999888888999999999998877754
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.6e-37 Score=335.17 Aligned_cols=325 Identities=22% Similarity=0.254 Sum_probs=269.7
Q ss_pred Cccccccchhhh---cchhccc-CCCceeecCchhhhcCCCCCEEEcccccc----------------------------
Q 035895 9 RQLDGGMTGDVC---YRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYV---------------------------- 56 (527)
Q Consensus 9 ~~~~~~~~~~~~---~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~---------------------------- 56 (527)
-+-|+...|..| .++..++ ++|.++|.+|.+|.+|++|++|||++|.+
T Consensus 66 ~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l 145 (636)
T 4eco_A 66 LDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHY 145 (636)
T ss_dssp GGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHH
T ss_pred cccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhH
Confidence 355533366667 4788888 89999999999999999999999999943
Q ss_pred --------------------------------------------------cccccc------ccceEEcccccccC----
Q 035895 57 --------------------------------------------------LGRLSS------IVDELSLSDNYLTS---- 76 (527)
Q Consensus 57 --------------------------------------------------~~~~~~------~l~~L~Ls~N~l~~---- 76 (527)
.+ +|. .++.|+|++|.+++
T Consensus 146 ~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~ 224 (636)
T 4eco_A 146 QKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENIC 224 (636)
T ss_dssp HHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBS
T ss_pred HHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccc
Confidence 23 343 37889999999987
Q ss_pred --------------CCCCCcccccCC--CCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCc-ccc-ccchhhcC
Q 035895 77 --------------STPELSFLSSMS--NCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCN-ISG-GISEEIGN 138 (527)
Q Consensus 77 --------------~~~~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~-l~~-~~~~~~~~ 138 (527)
++. .+. ++++|++|+|++|++.+.+|..+..+. +|++|++++|. +++ .+|..++.
T Consensus 225 ~~~~~~~~~~~~~~ip~------~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~n~~l~~~~lp~~~~~ 297 (636)
T 4eco_A 225 EAWENENSEYAQQYKTE------DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALP-EMQLINVACNRGISGEQLKDDWQA 297 (636)
T ss_dssp SSCSCTTSHHHHHHTTS------CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCS-SCCEEECTTCTTSCHHHHHHHHHH
T ss_pred ccccccccchhcccCch------hhhhcccCCCCEEEecCCcCCccChHHHhcCC-CCCEEECcCCCCCccccchHHHHh
Confidence 443 456 889999999999999999998888875 79999999998 888 78888877
Q ss_pred C------cCCcEEEeecCcccccCcc--cccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccC
Q 035895 139 L------TDLISIDLGGNKLNGSISI--TLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGN 210 (527)
Q Consensus 139 l------~~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 210 (527)
+ ++|++|++++|+++ .+|. .++.+++|+.|++++|+++|.+| .|..+++|+.|++++|+++ .+|..|..
T Consensus 298 L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 374 (636)
T 4eco_A 298 LADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCG 374 (636)
T ss_dssp HHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEE
T ss_pred hhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhh
Confidence 6 89999999999998 6777 89999999999999999998888 8999999999999999998 67888999
Q ss_pred Ccc-CceeeCCCCCCCCCchhhhCCC--CccEEEccCCcccccCCcccc-------CCCCCCEEEccCCCCCCCChhhhh
Q 035895 211 LTA-LRNLHLDSNELTSIPSILWNLK--DILYLDFWSNLFVGPLPSKIG-------NLKVLTRIDFSRNNLLGDIPTTIQ 280 (527)
Q Consensus 211 l~~-L~~L~L~~N~l~~lp~~~~~l~--~L~~l~l~~n~~~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~ 280 (527)
+++ |++|++++|+++.+|..+..+. +|+.|++++|.+.+..|..+. .+++|++|++++|++....+..+.
T Consensus 375 l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~ 454 (636)
T 4eco_A 375 FTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFS 454 (636)
T ss_dssp ECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHH
T ss_pred hcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHc
Confidence 999 9999999999999998776654 899999999999998888888 788999999999999865555567
Q ss_pred cCCCCCEEEcccccceeecCCCCCCCC-------CCCEEeCCCCcccccCccchh--hhccCCeeEeeeeeeec
Q 035895 281 GLKSLQFLSLGHNRLQGSIPNSFDDLV-------SLESLDLSNNNLSEIIPLSLE--KLLYLNILLIVVVILAL 345 (527)
Q Consensus 281 ~l~~L~~L~L~~N~l~~~~p~~~~~l~-------~L~~L~ls~N~l~~~~p~~~~--~l~~L~~L~~~~~~~~~ 345 (527)
.+++|++|+|++|+++...+..+.... +|+.|++++|+++. +|..+. .++.|+.|+++.+.+..
T Consensus 455 ~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 455 TGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK-LSDDFRATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp TTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCB-CCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred cCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCc-cChhhhhccCCCcCEEECCCCCCCC
Confidence 789999999999999843333444333 88999999998884 566665 88888888888776643
No 5
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=316.06 Aligned_cols=308 Identities=20% Similarity=0.201 Sum_probs=265.8
Q ss_pred CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccC
Q 035895 28 SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRN 101 (527)
Q Consensus 28 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N 101 (527)
++++++.++.. + .++++.|+|++|.+.+..+. .++.|+|++|.++.+.+. .|.++++|++|+|++|
T Consensus 19 ~~~~l~~ip~~-~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~-----~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 19 HRKRFVAVPEG-I--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPG-----AFNNLFNLRTLGLRSN 90 (477)
T ss_dssp CSCCCSSCCSC-C--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTT-----TTTTCTTCCEEECCSS
T ss_pred CCCCcCcCCCC-C--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChh-----hhhCCccCCEEECCCC
Confidence 34556655442 2 25789999999988765443 478899999988876543 5788999999999999
Q ss_pred CCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccC
Q 035895 102 PLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIP 181 (527)
Q Consensus 102 ~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 181 (527)
+++++.+..|..+. +|++|+|++|.+++..+..|..+++|++|++++|.+++..+..|..+++|+.|++++|.+++..+
T Consensus 91 ~l~~~~~~~~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 169 (477)
T 2id5_A 91 RLKLIPLGVFTGLS-NLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPT 169 (477)
T ss_dssp CCCSCCTTSSTTCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCH
T ss_pred cCCccCcccccCCC-CCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccCh
Confidence 99987666676664 79999999999998889999999999999999999998888899999999999999999997777
Q ss_pred hhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCC-CchhhhCCCCccEEEccCCcccccCCccccCCCC
Q 035895 182 NVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTS-IPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKV 260 (527)
Q Consensus 182 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~ 260 (527)
..|..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+ +|.......+|+.|++++|.+.+..+..+..+++
T Consensus 170 ~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~ 249 (477)
T 2id5_A 170 EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVY 249 (477)
T ss_dssp HHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTT
T ss_pred hHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccc
Confidence 789999999999999999998888899999999999999987655 7777777779999999999988665578899999
Q ss_pred CCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeee
Q 035895 261 LTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVV 340 (527)
Q Consensus 261 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~ 340 (527)
|++|+|++|.+.+..+..|.++++|++|+|++|++++..|..|..+++|+.|++++|+++++.+..|..++.|+.|+++.
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 329 (477)
T 2id5_A 250 LRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDS 329 (477)
T ss_dssp CCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCS
T ss_pred cCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccC
Confidence 99999999999988888899999999999999999999999999999999999999999998888889999999999888
Q ss_pred eeee
Q 035895 341 VILA 344 (527)
Q Consensus 341 ~~~~ 344 (527)
+.+.
T Consensus 330 N~l~ 333 (477)
T 2id5_A 330 NPLA 333 (477)
T ss_dssp SCEE
T ss_pred CCcc
Confidence 7764
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=3.5e-36 Score=325.23 Aligned_cols=324 Identities=21% Similarity=0.222 Sum_probs=267.5
Q ss_pred cchhhhcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccC
Q 035895 15 MTGDVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSM 87 (527)
Q Consensus 15 ~~~~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~ 87 (527)
++.++...+..+| ++|+++++.|.+|.++++|++|+|++|.+.+..|. .++.|+|++|.++...+. .|
T Consensus 27 iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-----~~ 101 (606)
T 3t6q_A 27 IPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAET-----AL 101 (606)
T ss_dssp CCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTT-----TT
T ss_pred CcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChh-----hh
Confidence 3444555678888 89999999999999999999999999988766553 478999999999876553 57
Q ss_pred CCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCC
Q 035895 88 SNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQ 167 (527)
Q Consensus 88 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 167 (527)
.++++|++|++++|++++..|..+..+. +|++|++++|.+++...+.+..+++|++|++++|++++..+..++.+++|+
T Consensus 102 ~~l~~L~~L~L~~n~i~~l~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 180 (606)
T 3t6q_A 102 SGPKALKHLFFIQTGISSIDFIPLHNQK-TLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQAT 180 (606)
T ss_dssp SSCTTCCEEECTTSCCSCGGGSCCTTCT-TCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCC
T ss_pred cccccccEeeccccCcccCCcchhccCC-cccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccc
Confidence 8899999999999999987666676664 799999999999876555556689999999999999988888888999998
Q ss_pred --EEeccCcccccccChhhhcC---------------------------------------------------cccCeee
Q 035895 168 --FLSFRGNELEGSIPNVLCHL---------------------------------------------------AVLFQLD 194 (527)
Q Consensus 168 --~L~l~~N~l~~~~p~~~~~l---------------------------------------------------~~L~~L~ 194 (527)
.|++++|.+.+..|..|... .+|+.|+
T Consensus 181 ~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~ 260 (606)
T 3t6q_A 181 NLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESIN 260 (606)
T ss_dssp SEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEE
T ss_pred eeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEE
Confidence 88999998887766554321 1677888
Q ss_pred eecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCC
Q 035895 195 LRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGD 274 (527)
Q Consensus 195 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 274 (527)
+++|.+++..+..|+++++|++|++++|+++.+|..+..+++|++|++++|.+.+..|..+..+++|++|++++|.+.+.
T Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~ 340 (606)
T 3t6q_A 261 LQKHYFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLE 340 (606)
T ss_dssp CTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCB
T ss_pred eecCccCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccc
Confidence 88888888888888999999999999999999988888888999999999988888888888888899999988888766
Q ss_pred Chh-hhhcCCCCCEEEcccccceeec--CCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeee
Q 035895 275 IPT-TIQGLKSLQFLSLGHNRLQGSI--PNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 275 ~p~-~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
+|. .+..+++|++|++++|++++.. |..+..+++|+.|++++|.+++..|..+..++.|+.|+++.+.+.
T Consensus 341 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 413 (606)
T 3t6q_A 341 LGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK 413 (606)
T ss_dssp CCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE
T ss_pred cchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC
Confidence 654 4888888888888888888766 778888888888888888888888888888888888888766553
No 7
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2e-36 Score=328.27 Aligned_cols=312 Identities=20% Similarity=0.214 Sum_probs=266.5
Q ss_pred hhcchhccc-CCCceeecCchhhhcCCCCCEEEccccc-ccc-ccc------------cccceEEcccccccCCCCCCcc
Q 035895 19 VCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNY-VLG-RLS------------SIVDELSLSDNYLTSSTPELSF 83 (527)
Q Consensus 19 ~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~-~~~------------~~l~~L~Ls~N~l~~~~~~~~~ 83 (527)
.+..+..++ ++|++.+.+|..|.++++|++|++++|. +.+ .+| ..++.|+|++|.++.++..
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~--- 323 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVE--- 323 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCH---
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCch---
Confidence 456788888 8899999999999999999999999998 877 555 4688999999999854430
Q ss_pred cccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcC-CcEEEeecCcccccCcccccC
Q 035895 84 LSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTD-LISIDLGGNKLNGSISITLGK 162 (527)
Q Consensus 84 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~~ 162 (527)
..+.++++|++|++++|+++|.+| .+..+. +|+.|++++|.++ .+|..+..+++ |++|++++|+++ .+|..+..
T Consensus 324 -~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~-~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~ 398 (636)
T 4eco_A 324 -TSLQKMKKLGMLECLYNQLEGKLP-AFGSEI-KLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDA 398 (636)
T ss_dssp -HHHTTCTTCCEEECCSCCCEEECC-CCEEEE-EESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCT
T ss_pred -hhhccCCCCCEEeCcCCcCccchh-hhCCCC-CCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhh
Confidence 146788999999999999998888 776664 7999999999998 77888999999 999999999998 56777776
Q ss_pred CC--CCCEEeccCcccccccChhhh-------cCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhC
Q 035895 163 LQ--KLQFLSFRGNELEGSIPNVLC-------HLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233 (527)
Q Consensus 163 l~--~L~~L~l~~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~ 233 (527)
++ +|+.|++++|.+.+..|..|. .+++|+.|++++|+++..++..+..+++|++|++++|+++.+|...+.
T Consensus 399 ~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~ 478 (636)
T 4eco_A 399 KSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLK 478 (636)
T ss_dssp TCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSE
T ss_pred cccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhc
Confidence 54 899999999999998888888 788999999999999976666677899999999999999998876544
Q ss_pred C--------CCccEEEccCCcccccCCcccc--CCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEc------cccccee
Q 035895 234 L--------KDILYLDFWSNLFVGPLPSKIG--NLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSL------GHNRLQG 297 (527)
Q Consensus 234 l--------~~L~~l~l~~n~~~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------~~N~l~~ 297 (527)
. ++|+.|++++|.+. .+|..+. .+++|++|+|++|++++ +|..+..+++|++|++ ++|++.+
T Consensus 479 ~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~ 556 (636)
T 4eco_A 479 DENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLR 556 (636)
T ss_dssp ETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCC
T ss_pred cccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccc
Confidence 2 28999999999998 6788887 99999999999999997 8889999999999999 5677888
Q ss_pred ecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeee
Q 035895 298 SIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 298 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~ 343 (527)
.+|..|..+++|+.|++++|++ +.+|..+. +.|+.|+++.+.+
T Consensus 557 ~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l 599 (636)
T 4eco_A 557 EWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPN 599 (636)
T ss_dssp CCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTT
T ss_pred cChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCC
Confidence 9999999999999999999999 45566555 6889999887755
No 8
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-36 Score=313.04 Aligned_cols=298 Identities=19% Similarity=0.188 Sum_probs=273.5
Q ss_pred hhcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCCC
Q 035895 19 VCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNCK 91 (527)
Q Consensus 19 ~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~ 91 (527)
+-..+..+| ++|+++++.+..|.++++|++|+|++|.+.+..+. .++.|+|++|.++.++.. .|.+++
T Consensus 30 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~ 104 (477)
T 2id5_A 30 IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG-----VFTGLS 104 (477)
T ss_dssp CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT-----SSTTCT
T ss_pred CCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc-----cccCCC
Confidence 345678888 99999999999999999999999999998776553 478999999999987654 478999
Q ss_pred CCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEec
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSF 171 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 171 (527)
+|++|+|++|++++..|..+..+. +|+.|++++|.+++..+..|..+++|++|++++|++++..+..+..+++|+.|++
T Consensus 105 ~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l 183 (477)
T 2id5_A 105 NLTKLDISENKIVILLDYMFQDLY-NLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL 183 (477)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCT-TCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEE
T ss_pred CCCEEECCCCccccCChhHccccc-cCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeC
Confidence 999999999999998888888775 7999999999999999999999999999999999999888888999999999999
Q ss_pred cCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCch-hhhCCCCccEEEccCCccccc
Q 035895 172 RGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS-ILWNLKDILYLDFWSNLFVGP 250 (527)
Q Consensus 172 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~l~l~~n~~~~~ 250 (527)
++|.+.+..+..|..+++|+.|++++|.+.+.+|..+....+|+.|++++|+++.+|. .+..+++|+.|++++|.+.+.
T Consensus 184 ~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 263 (477)
T 2id5_A 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTI 263 (477)
T ss_dssp ESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCcc
Confidence 9999998888899999999999999999888787777777799999999999999985 678899999999999999998
Q ss_pred CCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCccccc
Q 035895 251 LPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 322 (527)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 322 (527)
.+..|..+++|++|+|++|++.+..|..|.++++|++|++++|++++..+..|..+++|+.|++++|++...
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~ 335 (477)
T 2id5_A 264 EGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACD 335 (477)
T ss_dssp CTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECS
T ss_pred ChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCc
Confidence 889999999999999999999999999999999999999999999988888899999999999999999754
No 9
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.8e-35 Score=318.20 Aligned_cols=317 Identities=20% Similarity=0.235 Sum_probs=243.9
Q ss_pred hcchhccc-CCCceeecCchhhhcCCCCC--EEEcccccccccccc----------------------------------
Q 035895 20 CYRICTID-SQNKLVGIVSITIFNLSTLK--VFDVDNNYVLGRLSS---------------------------------- 62 (527)
Q Consensus 20 ~~~~~~~~-s~N~l~~~~~~~~~~l~~L~--~L~Ls~N~~~~~~~~---------------------------------- 62 (527)
+..+..++ ++|+++++.+..|.++++|+ .|++++|.+.+..+.
T Consensus 152 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~ 231 (606)
T 3t6q_A 152 TEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLW 231 (606)
T ss_dssp CTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEE
T ss_pred CcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhhee
Confidence 55666666 66677777677777777777 667777665543321
Q ss_pred -----------------------ccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhcccccc
Q 035895 63 -----------------------IVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLE 119 (527)
Q Consensus 63 -----------------------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~ 119 (527)
.++.|++++|.++.+++. .|..+++|++|++++|+++. +|..+..+. +|+
T Consensus 232 ~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~L~l~~n~l~~-lp~~l~~l~-~L~ 304 (606)
T 3t6q_A 232 LGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSN-----TFHCFSGLQELDLTATHLSE-LPSGLVGLS-TLK 304 (606)
T ss_dssp CCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTT-----TTTTCTTCSEEECTTSCCSC-CCSSCCSCT-TCC
T ss_pred chhhccccccccChhHhchhhcCceeEEEeecCccCccCHH-----HhccccCCCEEeccCCccCC-CChhhcccc-cCC
Confidence 234455666666554432 36778888888888888884 566666654 788
Q ss_pred EEEcccCccccccchhhcCCcCCcEEEeecCcccccCcc-cccCCCCCCEEeccCccccccc--ChhhhcCcccCeeeee
Q 035895 120 FIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISI-TLGKLQKLQFLSFRGNELEGSI--PNVLCHLAVLFQLDLR 196 (527)
Q Consensus 120 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~~l~~L~~L~l~~N~l~~~~--p~~~~~l~~L~~L~L~ 196 (527)
+|++++|.+++..|..+..+++|++|++++|.+.+..+. .+..+++|+.|++++|.+++.. |..+..+++|+.|+++
T Consensus 305 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~ 384 (606)
T 3t6q_A 305 KLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLS 384 (606)
T ss_dssp EEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECC
T ss_pred EEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECC
Confidence 888888888887788888888888888888888754443 4788888888888888887665 6778888888888888
Q ss_pred cccCCCCCCccccCCccCceeeCCCCCCCCC-c-hhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCC
Q 035895 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSI-P-SILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGD 274 (527)
Q Consensus 197 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l-p-~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 274 (527)
+|++.+..|..|..+++|++|++++|+++.. | ..+..+++|+.|++++|.+.+..|..+..+++|++|++++|.+.+.
T Consensus 385 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 464 (606)
T 3t6q_A 385 YNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKG 464 (606)
T ss_dssp SCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGG
T ss_pred CCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCcc
Confidence 8888888888888888888888888888764 3 3367788888888888888888888888888888888888888762
Q ss_pred ---ChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeee
Q 035895 275 ---IPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 275 ---~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
.+..+..+++|++|++++|++++..|..|..+++|+.|++++|++++..|..+..++.| .|+++.+.+.
T Consensus 465 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~ 536 (606)
T 3t6q_A 465 NIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHIS 536 (606)
T ss_dssp EECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCC
T ss_pred ccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCccc
Confidence 33568888888888888888888888888888888888888888888888888888888 8887776654
No 10
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.7e-35 Score=327.35 Aligned_cols=317 Identities=20% Similarity=0.221 Sum_probs=245.5
Q ss_pred chhhh---cchhccc-CCCceeecCchhhhcCCCCCEEEc-cccccccc-------------------------------
Q 035895 16 TGDVC---YRICTID-SQNKLVGIVSITIFNLSTLKVFDV-DNNYVLGR------------------------------- 59 (527)
Q Consensus 16 ~~~~~---~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~L-s~N~~~~~------------------------------- 59 (527)
.|..| .++..++ ++|.++|.+|.+|.+|++|+.||| ++|.+.|.
T Consensus 315 ~GV~C~~~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~ 394 (876)
T 4ecn_A 315 PGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDY 394 (876)
T ss_dssp TTEEECTTSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCC
T ss_pred CceEecCCCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhcc
Confidence 66667 4788888 999999999999999999999999 88865433
Q ss_pred ---------------------------------------------ccc------ccceEEcccccccC------------
Q 035895 60 ---------------------------------------------LSS------IVDELSLSDNYLTS------------ 76 (527)
Q Consensus 60 ---------------------------------------------~~~------~l~~L~Ls~N~l~~------------ 76 (527)
+|. .++.|+|++|.|++
T Consensus 395 ~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~ 474 (876)
T 4ecn_A 395 DQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANS 474 (876)
T ss_dssp CGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred CcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCccccccccccc
Confidence 343 36788899988887
Q ss_pred ------CCCCCcccccCC--CCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCc-ccc-ccchhhcCCc------
Q 035895 77 ------STPELSFLSSMS--NCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCN-ISG-GISEEIGNLT------ 140 (527)
Q Consensus 77 ------~~~~~~~~~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~-l~~-~~~~~~~~l~------ 140 (527)
++. .+. ++++|++|+|++|++.+.+|..+..+. +|+.|+|++|+ +++ .+|..+..++
T Consensus 475 n~~~g~iP~------~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~-~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l 547 (876)
T 4ecn_A 475 DYAKQYENE------ELSWSNLKDLTDVELYNCPNMTQLPDFLYDLP-ELQSLNIACNRGISAAQLKADWTRLADDEDTG 547 (876)
T ss_dssp HHHHHHTTS------CCCGGGCTTCCEEEEESCTTCCSCCGGGGGCS-SCCEEECTTCTTSCHHHHHHHHHHHHHCTTTT
T ss_pred ccccccCCh------hhhhccCCCCCEEECcCCCCCccChHHHhCCC-CCCEEECcCCCCcccccchHHHHhhhhccccc
Confidence 333 344 888899999999988888888888775 79999999997 887 6777766665
Q ss_pred -CCcEEEeecCcccccCcc--cccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCcc-Cce
Q 035895 141 -DLISIDLGGNKLNGSISI--TLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTA-LRN 216 (527)
Q Consensus 141 -~L~~L~L~~N~l~~~~~~--~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~ 216 (527)
+|++|+|++|+++ .+|. .++.+++|+.|++++|+++ .+| .|..+++|+.|+|++|+++ .+|..+.++++ |+.
T Consensus 548 ~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~ 623 (876)
T 4ecn_A 548 PKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEG 623 (876)
T ss_dssp TTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCE
T ss_pred CCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCE
Confidence 8899999999888 6666 7888899999999999888 777 7888889999999999888 67778888888 999
Q ss_pred eeCCCCCCCCCchhhhCCC--CccEEEccCCcccccCCccc---c--CCCCCCEEEccCCCCCCCChhhhhcCCCCCEEE
Q 035895 217 LHLDSNELTSIPSILWNLK--DILYLDFWSNLFVGPLPSKI---G--NLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLS 289 (527)
Q Consensus 217 L~L~~N~l~~lp~~~~~l~--~L~~l~l~~n~~~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 289 (527)
|++++|+++.+|..+..+. +|+.|++++|.+.+.+|... . .+++|+.|++++|.+....+..+..+++|+.|+
T Consensus 624 L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~ 703 (876)
T 4ecn_A 624 LGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTII 703 (876)
T ss_dssp EECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEE
T ss_pred EECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEE
Confidence 9999999888887766554 38888888888877655322 2 334788888888888744444455788888888
Q ss_pred cccccceeecCCC-CCCC-------CCCCEEeCCCCcccccCccchh--hhccCCeeEeeeeeeec
Q 035895 290 LGHNRLQGSIPNS-FDDL-------VSLESLDLSNNNLSEIIPLSLE--KLLYLNILLIVVVILAL 345 (527)
Q Consensus 290 L~~N~l~~~~p~~-~~~l-------~~L~~L~ls~N~l~~~~p~~~~--~l~~L~~L~~~~~~~~~ 345 (527)
|++|+++ .+|.. +... ++|+.|+|++|+++ .+|..+. .++.|+.|+++.+.+..
T Consensus 704 Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~ 767 (876)
T 4ecn_A 704 LSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS 767 (876)
T ss_dssp CCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred CCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc
Confidence 8888887 44443 3322 27888888888887 4566665 78888888887766543
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.9e-36 Score=322.49 Aligned_cols=137 Identities=23% Similarity=0.232 Sum_probs=95.6
Q ss_pred hhhcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCC
Q 035895 18 DVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNC 90 (527)
Q Consensus 18 ~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l 90 (527)
++...+..++ ++|+++++.+.+|.++++|++|+|++|.+.+..+. .++.|+|++|.++...+. .|.++
T Consensus 29 ~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~-----~~~~l 103 (606)
T 3vq2_A 29 DIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPG-----SFSGL 103 (606)
T ss_dssp TSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTT-----SSTTC
T ss_pred CCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChh-----hcCCc
Confidence 3345677777 77888888887888888888888888877665443 367788888887776443 46777
Q ss_pred CCCCEEEcccCCCCcccChhHhhccccccEEEcccCcccc-ccchhhcCCcCCcEEEeecCcccccCcccc
Q 035895 91 KYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISG-GISEEIGNLTDLISIDLGGNKLNGSISITL 160 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 160 (527)
++|++|++++|++++..+..+..+. +|++|++++|.+++ .+|..+.++++|++|++++|++++..+..+
T Consensus 104 ~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 173 (606)
T 3vq2_A 104 TSLENLVAVETKLASLESFPIGQLI-TLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDL 173 (606)
T ss_dssp TTCCEEECTTSCCCCSSSSCCTTCT-TCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTT
T ss_pred ccCCEEEccCCccccccccccCCCC-CCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhh
Confidence 7777777777777766556666654 67777777777765 347777777777777777777665544433
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.6e-35 Score=320.14 Aligned_cols=112 Identities=18% Similarity=0.163 Sum_probs=81.0
Q ss_pred hhcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCCC
Q 035895 19 VCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNCK 91 (527)
Q Consensus 19 ~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~ 91 (527)
.|..+..+| ++|+++++.|.+|.++++|++|+|++|.+.+..|. .++.|+|++|.++.+++. .+.+++
T Consensus 54 ~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~ 128 (606)
T 3vq2_A 54 NFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESF-----PIGQLI 128 (606)
T ss_dssp TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSS-----CCTTCT
T ss_pred CCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccccccc-----ccCCCC
Confidence 356788888 88899999888899999999999999988766553 367888888888776542 356677
Q ss_pred CCCEEEcccCCCCc-ccChhHhhccccccEEEcccCccccccchhh
Q 035895 92 YLKKLDISRNPLDG-FLPRVVGNFSQSLEFIWMSDCNISGGISEEI 136 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~-~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~ 136 (527)
+|++|++++|++++ .+|..+..+. +|++|++++|.+++..+..+
T Consensus 129 ~L~~L~L~~n~l~~~~lp~~~~~l~-~L~~L~Ls~n~l~~~~~~~~ 173 (606)
T 3vq2_A 129 TLKKLNVAHNFIHSCKLPAYFSNLT-NLVHVDLSYNYIQTITVNDL 173 (606)
T ss_dssp TCCEEECCSSCCCCCCCCGGGGTCT-TCCEEECCSSCCCEECTTTT
T ss_pred CCCEEeCCCCcccceechHhHhhcC-CCCEEEccCCcceecChhhh
Confidence 77777777777765 3466666654 57777777776665554433
No 13
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.6e-35 Score=311.45 Aligned_cols=314 Identities=22% Similarity=0.287 Sum_probs=201.9
Q ss_pred cchhhhcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccC
Q 035895 15 MTGDVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSM 87 (527)
Q Consensus 15 ~~~~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~ 87 (527)
++.++...+..+| ++|++++++|.+|.++++|++|+|++|.+.+..|. .++.|+|++|+|+.++..
T Consensus 15 ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~------- 87 (520)
T 2z7x_B 15 VPKDLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCH------- 87 (520)
T ss_dssp CCCSCCTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECC-------
T ss_pred ccccccccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCcc-------
Confidence 3333446788888 88888888888888888888888888888766543 467888888888764331
Q ss_pred CCCCCCCEEEcccCCCCcc-cChhHhhccccccEEEcccCccccccchhhcCCcCC--cEEEeecCcc--cccCcccccC
Q 035895 88 SNCKYLKKLDISRNPLDGF-LPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDL--ISIDLGGNKL--NGSISITLGK 162 (527)
Q Consensus 88 ~~l~~L~~L~Ls~N~l~~~-~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~ 162 (527)
.+++|++|++++|++++. +|..+..+. +|++|++++|.+++ ..+..+++| ++|++++|.+ .+..|..+..
T Consensus 88 -~l~~L~~L~L~~N~l~~~~~p~~~~~l~-~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~ 162 (520)
T 2z7x_B 88 -PTVNLKHLDLSFNAFDALPICKEFGNMS-QLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQD 162 (520)
T ss_dssp -CCCCCSEEECCSSCCSSCCCCGGGGGCT-TCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTT
T ss_pred -ccCCccEEeccCCccccccchhhhccCC-cceEEEecCcccch---hhccccccceeeEEEeecccccccccccccccc
Confidence 577788888888888763 567777664 67888887777764 234444555 6666666655 3333333332
Q ss_pred CC------------------------------------------------------------------------------
Q 035895 163 LQ------------------------------------------------------------------------------ 164 (527)
Q Consensus 163 l~------------------------------------------------------------------------------ 164 (527)
+.
T Consensus 163 l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~ 242 (520)
T 2z7x_B 163 FNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQ 242 (520)
T ss_dssp CCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHH
T ss_pred cccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHH
Confidence 11
Q ss_pred -----CCCEEeccCcccccccChhh-----------------------------------------------------hc
Q 035895 165 -----KLQFLSFRGNELEGSIPNVL-----------------------------------------------------CH 186 (527)
Q Consensus 165 -----~L~~L~l~~N~l~~~~p~~~-----------------------------------------------------~~ 186 (527)
+|+.|++++|++.+.+|..+ ..
T Consensus 243 ~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~ 322 (520)
T 2z7x_B 243 LVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSK 322 (520)
T ss_dssp HHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSS
T ss_pred HhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhh
Confidence 45555555555554444433 45
Q ss_pred CcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCC---chhhhCCCCccEEEccCCcccccCCc-cccCCCCCC
Q 035895 187 LAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSI---PSILWNLKDILYLDFWSNLFVGPLPS-KIGNLKVLT 262 (527)
Q Consensus 187 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l---p~~~~~l~~L~~l~l~~n~~~~~~p~-~~~~l~~L~ 262 (527)
+++|++|++++|++++..|..++.+++|++|++++|+++++ |..+..+++|++|++++|.+.+.+|. .+..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 56666666666666666666666666677777777766643 34556666667777776666664443 356666677
Q ss_pred EEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeee
Q 035895 263 RIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVI 342 (527)
Q Consensus 263 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~ 342 (527)
+|++++|++++..|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++++++..+..++.|+.|+++.+.
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~ 479 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNP 479 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCC
Confidence 777777666655554443 56677777777766 555555566777777777777765444446666667766666655
Q ss_pred e
Q 035895 343 L 343 (527)
Q Consensus 343 ~ 343 (527)
+
T Consensus 480 ~ 480 (520)
T 2z7x_B 480 W 480 (520)
T ss_dssp B
T ss_pred C
Confidence 4
No 14
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2.1e-35 Score=307.86 Aligned_cols=308 Identities=17% Similarity=0.187 Sum_probs=263.4
Q ss_pred CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccC-CCCCCcccccCCCCCCCCEEEccc
Q 035895 28 SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTS-STPELSFLSSMSNCKYLKKLDISR 100 (527)
Q Consensus 28 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~-~~~~~~~~~~~~~l~~L~~L~Ls~ 100 (527)
++++++.++. + .++|++|||++|.+.+..+. .++.|+|++|.+.. +++ ..|.++++|++|+|++
T Consensus 18 ~~~~l~~lp~--l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~-----~~~~~l~~L~~L~Ls~ 88 (455)
T 3v47_A 18 INRGLHQVPE--L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRN-----NTFRGLSSLIILKLDY 88 (455)
T ss_dssp CSSCCSSCCC--C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECT-----TTTTTCTTCCEEECTT
T ss_pred CCCCcccCCC--C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECc-----ccccccccCCEEeCCC
Confidence 5666776655 2 27899999999999876553 47899999998863 222 3578999999999999
Q ss_pred CCCCcccChhHhhccccccEEEcccCccccccchh--hcCCcCCcEEEeecCcccccCccc-ccCCCCCCEEeccCcccc
Q 035895 101 NPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEE--IGNLTDLISIDLGGNKLNGSISIT-LGKLQKLQFLSFRGNELE 177 (527)
Q Consensus 101 N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~~~-~~~l~~L~~L~l~~N~l~ 177 (527)
|++++..|..+..+. +|++|+|++|.+++..+.. +..+++|++|+|++|++++..|.. +..+++|++|++++|.++
T Consensus 89 n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~ 167 (455)
T 3v47_A 89 NQFLQLETGAFNGLA-NLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVK 167 (455)
T ss_dssp CTTCEECTTTTTTCT-TCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBS
T ss_pred CccCccChhhccCcc-cCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccc
Confidence 999998898888875 7999999999999755554 899999999999999999887766 889999999999999999
Q ss_pred cccChhhhcC--cccCeeeeecccCCCCCCccc--------cCCccCceeeCCCCCCCC-CchhhhC-------------
Q 035895 178 GSIPNVLCHL--AVLFQLDLRGNKLSGSIPTCF--------GNLTALRNLHLDSNELTS-IPSILWN------------- 233 (527)
Q Consensus 178 ~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~--------~~l~~L~~L~L~~N~l~~-lp~~~~~------------- 233 (527)
+..|..+..+ ..|+.|++++|.+.+..+..+ ..+++|++|++++|++++ +|..+..
T Consensus 168 ~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~ 247 (455)
T 3v47_A 168 SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247 (455)
T ss_dssp CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECT
T ss_pred ccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeec
Confidence 9888888876 789999999999997665543 367899999999999876 3433321
Q ss_pred --------------------------CCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCE
Q 035895 234 --------------------------LKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQF 287 (527)
Q Consensus 234 --------------------------l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 287 (527)
.++|+.+++++|.+.+..|..++.+++|++|++++|++.+..|..|.++++|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 327 (455)
T 3v47_A 248 NSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLK 327 (455)
T ss_dssp TCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCE
Confidence 257889999999999989999999999999999999999888889999999999
Q ss_pred EEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeeec
Q 035895 288 LSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILAL 345 (527)
Q Consensus 288 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~~ 345 (527)
|++++|++++..|..|..+++|++|++++|++++..|..+..++.|+.|+++.+.+..
T Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp EECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred EECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCcccc
Confidence 9999999998888999999999999999999999999999999999999998876643
No 15
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.4e-35 Score=311.20 Aligned_cols=315 Identities=20% Similarity=0.221 Sum_probs=247.6
Q ss_pred cchhhhcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccC
Q 035895 15 MTGDVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSM 87 (527)
Q Consensus 15 ~~~~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~ 87 (527)
++.+....+..+| ++|.++++++.+|.++++|++|+|++|.+.+..+. .++.|+|++|+|+.++..
T Consensus 46 ip~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~------- 118 (562)
T 3a79_B 46 VPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNISCC------- 118 (562)
T ss_dssp CCTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEECSC-------
T ss_pred CCCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCccCcc-------
Confidence 4455557788888 88899998888999999999999999988766553 478899999988865432
Q ss_pred CCCCCCCEEEcccCCCCcc-cChhHhhccccccEEEcccCccccccchhhcCCcCC--cEEEeecCcc--cccCcccccC
Q 035895 88 SNCKYLKKLDISRNPLDGF-LPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDL--ISIDLGGNKL--NGSISITLGK 162 (527)
Q Consensus 88 ~~l~~L~~L~Ls~N~l~~~-~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L--~~L~L~~N~l--~~~~~~~~~~ 162 (527)
.+++|++||+++|++++. .|..+..+. +|++|++++|.+++. .+..+++| ++|++++|++ ++..|..+..
T Consensus 119 -~l~~L~~L~Ls~N~l~~l~~p~~~~~l~-~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~ 193 (562)
T 3a79_B 119 -PMASLRHLDLSFNDFDVLPVCKEFGNLT-KLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQI 193 (562)
T ss_dssp -CCTTCSEEECCSSCCSBCCCCGGGGGCT-TCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEE
T ss_pred -ccccCCEEECCCCCccccCchHhhcccC-cccEEecCCCccccC---chhhhhhceeeEEEeecccccccccCcccccc
Confidence 678899999999998874 357777765 799999999888753 34444555 8888888877 5554444443
Q ss_pred CC------------------------------------------------------------------------------
Q 035895 163 LQ------------------------------------------------------------------------------ 164 (527)
Q Consensus 163 l~------------------------------------------------------------------------------ 164 (527)
+.
T Consensus 194 l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~ 273 (562)
T 3a79_B 194 PNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFF 273 (562)
T ss_dssp CCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH
T ss_pred cCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhh
Confidence 32
Q ss_pred ---CCCEEeccCcccccccChhh-----------------------------------------------------hcCc
Q 035895 165 ---KLQFLSFRGNELEGSIPNVL-----------------------------------------------------CHLA 188 (527)
Q Consensus 165 ---~L~~L~l~~N~l~~~~p~~~-----------------------------------------------------~~l~ 188 (527)
+|++|++++|.+++.+|..+ ..++
T Consensus 274 ~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~ 353 (562)
T 3a79_B 274 WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPS 353 (562)
T ss_dssp TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCC
T ss_pred hcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCC
Confidence 67777777777776666544 5678
Q ss_pred ccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCc---hhhhCCCCccEEEccCCcccccCCc-cccCCCCCCEE
Q 035895 189 VLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIP---SILWNLKDILYLDFWSNLFVGPLPS-KIGNLKVLTRI 264 (527)
Q Consensus 189 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp---~~~~~l~~L~~l~l~~n~~~~~~p~-~~~~l~~L~~L 264 (527)
+|++|++++|++++..|..|+++++|++|++++|+++++| ..+..+++|++|++++|.+.+.+|. .+..+++|++|
T Consensus 354 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L 433 (562)
T 3a79_B 354 SFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVL 433 (562)
T ss_dssp CCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEE
T ss_pred CceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEE
Confidence 8999999999999888889999999999999999999765 4577889999999999999884554 58888999999
Q ss_pred EccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeee
Q 035895 265 DFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 265 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
++++|++++..|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++++++..+..++.|+.++++.+.+.
T Consensus 434 ~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~ 510 (562)
T 3a79_B 434 NLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWD 510 (562)
T ss_dssp ECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBC
T ss_pred ECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcC
Confidence 9999999876665543 68999999999998 56776669999999999999999765555888999999998887764
No 16
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=4.4e-34 Score=313.00 Aligned_cols=322 Identities=22% Similarity=0.234 Sum_probs=198.5
Q ss_pred chhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCC--CCcc--cccCCCC
Q 035895 22 RICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTP--ELSF--LSSMSNC 90 (527)
Q Consensus 22 ~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~--~~~~--~~~~~~l 90 (527)
.+..+| ++|+++++.+.+|.++++|++|++++|.+.+..+. .++.|++++|....... .++. ...|..+
T Consensus 249 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l 328 (680)
T 1ziw_A 249 NLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWL 328 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTC
T ss_pred CCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccC
Confidence 366777 77777777777777788888888887776654432 24555555543321100 0000 0134455
Q ss_pred CCCCEEEcccCCCCcccChhHhhcc---------------------------ccccEEEcccCccccccchhhcCCcCCc
Q 035895 91 KYLKKLDISRNPLDGFLPRVVGNFS---------------------------QSLEFIWMSDCNISGGISEEIGNLTDLI 143 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~~~~~~---------------------------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 143 (527)
++|++|++++|++++..+..+..+. .+|+.|++++|.+++..|..|..+++|+
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 408 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLE 408 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCC
Confidence 5566666666665555444444332 2355555555666666666666666666
Q ss_pred EEEeecCcccccCc-ccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCC--CCCCccccCCccCceeeCC
Q 035895 144 SIDLGGNKLNGSIS-ITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLS--GSIPTCFGNLTALRNLHLD 220 (527)
Q Consensus 144 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~ 220 (527)
+|++++|++++.++ ..|.++++|+.|++++|++.+..+..|..+++|+.|++++|.+. +..|..|.++++|++|+++
T Consensus 409 ~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls 488 (680)
T 1ziw_A 409 VLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLS 488 (680)
T ss_dssp EEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECC
T ss_pred EEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECC
Confidence 66666666655433 45666666666666666666666666666666666666666665 3456667777777777777
Q ss_pred CCCCCCCch-hhhCCCCccEEEccCCcccccCC--------ccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcc
Q 035895 221 SNELTSIPS-ILWNLKDILYLDFWSNLFVGPLP--------SKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLG 291 (527)
Q Consensus 221 ~N~l~~lp~-~~~~l~~L~~l~l~~n~~~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 291 (527)
+|+++.+|. .+..+++|++|++++|.+.+..+ ..+..+++|++|++++|++....+..|.++++|++|+++
T Consensus 489 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls 568 (680)
T 1ziw_A 489 NNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLG 568 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECC
Confidence 777776654 35566677777777776654321 235666777777777777765444556777777777777
Q ss_pred cccceeecCCCCCCCCCCCEEeCCCCcccccCccchh-hhccCCeeEeeeeee
Q 035895 292 HNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLE-KLLYLNILLIVVVIL 343 (527)
Q Consensus 292 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~~~~~~~ 343 (527)
+|++++..+..|..+++|+.|++++|++++.+|..+. .++.|+.++++.+.+
T Consensus 569 ~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~ 621 (680)
T 1ziw_A 569 LNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPF 621 (680)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCC
T ss_pred CCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCc
Confidence 7777766566666777777777777777776666665 566666666665544
No 17
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-35 Score=312.68 Aligned_cols=160 Identities=28% Similarity=0.298 Sum_probs=126.1
Q ss_pred hcCcccCeeeeecccCCCCC--CccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCC-ccccCCCCC
Q 035895 185 CHLAVLFQLDLRGNKLSGSI--PTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLP-SKIGNLKVL 261 (527)
Q Consensus 185 ~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p-~~~~~l~~L 261 (527)
..+++|+.|++++|++++.. |..+.++++|++|++++|.++++|..+..+++|+.|++++|.+.+..| ..+..+++|
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 35677788888888887554 667788888888888888888877767778888888888888877655 467788888
Q ss_pred CEEEccCCCCCCCChhhhhcCCCCCEEEcccccce-eecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeee
Q 035895 262 TRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQ-GSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVV 340 (527)
Q Consensus 262 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~ 340 (527)
++|++++|.+.+..|..|.++++|++|++++|+++ +.+|..|..+++|+.|++++|++++..|..+..++.|+.|+++.
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 503 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMAS 503 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCC
Confidence 88888888888777888888888888888888876 56778888888888888888888887788888888888888777
Q ss_pred eeee
Q 035895 341 VILA 344 (527)
Q Consensus 341 ~~~~ 344 (527)
+.+.
T Consensus 504 n~l~ 507 (570)
T 2z63_A 504 NQLK 507 (570)
T ss_dssp SCCS
T ss_pred CcCC
Confidence 6553
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.1e-34 Score=320.95 Aligned_cols=311 Identities=19% Similarity=0.209 Sum_probs=246.9
Q ss_pred hhcchhccc-CCCceeecCchhhhcCCCCCEEEccccc-ccc-cccc-------------ccceEEcccccccCCCCCCc
Q 035895 19 VCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNY-VLG-RLSS-------------IVDELSLSDNYLTSSTPELS 82 (527)
Q Consensus 19 ~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~-~~~-~~~~-------------~l~~L~Ls~N~l~~~~~~~~ 82 (527)
.+..+..++ ++|++.+.+|..|.+|++|+.|+|++|. +.+ .+|. .++.|+|++|.++.++..
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~-- 566 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPAS-- 566 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCH--
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCCh--
Confidence 346788888 8888899899999999999999999997 776 5553 588899999988854430
Q ss_pred ccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcC-CcEEEeecCcccccCccccc
Q 035895 83 FLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTD-LISIDLGGNKLNGSISITLG 161 (527)
Q Consensus 83 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~~L~L~~N~l~~~~~~~~~ 161 (527)
..+.++++|++|+|++|+++ .+| .+..+. +|+.|+|++|.++ .+|..+..+++ |++|+|++|+++ .+|..+.
T Consensus 567 --~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~-~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~ 639 (876)
T 4ecn_A 567 --ASLQKMVKLGLLDCVHNKVR-HLE-AFGTNV-KLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFN 639 (876)
T ss_dssp --HHHTTCTTCCEEECTTSCCC-BCC-CCCTTS-EESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCC
T ss_pred --hhhhcCCCCCEEECCCCCcc-cch-hhcCCC-cceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhh
Confidence 14678889999999999988 566 666654 7999999999988 77778888888 999999999988 5667776
Q ss_pred CCCC--CCEEeccCcccccccChhh---h--cCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCC
Q 035895 162 KLQK--LQFLSFRGNELEGSIPNVL---C--HLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNL 234 (527)
Q Consensus 162 ~l~~--L~~L~l~~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l 234 (527)
.++. |+.|++++|++.+.+|... . .+++|+.|++++|+++..++..+..+++|+.|+|++|+++.+|..++..
T Consensus 640 ~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~ 719 (876)
T 4ecn_A 640 AKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKP 719 (876)
T ss_dssp TTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSC
T ss_pred ccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhcc
Confidence 6654 8999999999887665432 2 3447888999999988544445568888999999999998888766543
Q ss_pred C--------CccEEEccCCcccccCCcccc--CCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEccc------ccceee
Q 035895 235 K--------DILYLDFWSNLFVGPLPSKIG--NLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGH------NRLQGS 298 (527)
Q Consensus 235 ~--------~L~~l~l~~n~~~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~------N~l~~~ 298 (527)
. +|+.|++++|++. .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|+|++ |++.+.
T Consensus 720 ~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ 797 (876)
T 4ecn_A 720 KDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQ 797 (876)
T ss_dssp TTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCC
T ss_pred ccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCccccccccc
Confidence 3 8889999999887 6777776 88899999999999886 788888899999998876 777888
Q ss_pred cCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeee
Q 035895 299 IPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 299 ~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~ 343 (527)
+|..|..+++|+.|+|++|++ +.+|..+. +.|+.|+++.+.+
T Consensus 798 ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l 839 (876)
T 4ecn_A 798 WPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPN 839 (876)
T ss_dssp CCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTT
T ss_pred ChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCC
Confidence 888888899999999999998 55666554 5788888887665
No 19
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.2e-35 Score=312.51 Aligned_cols=135 Identities=24% Similarity=0.323 Sum_probs=117.0
Q ss_pred cCCccCceeeCCCCCCCCC---chhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCCh-hhhhcCCC
Q 035895 209 GNLTALRNLHLDSNELTSI---PSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP-TTIQGLKS 284 (527)
Q Consensus 209 ~~l~~L~~L~L~~N~l~~l---p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~ 284 (527)
..+++|++|++++|+++.+ |..+..+++|++|++++|.+.+..+. +..+++|++|++++|.+.+..| ..|..+++
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 422 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRN 422 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTT
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCC
Confidence 4678889999999998876 67788899999999999998876554 8899999999999999987766 57889999
Q ss_pred CCEEEcccccceeecCCCCCCCCCCCEEeCCCCccc-ccCccchhhhccCCeeEeeeeeee
Q 035895 285 LQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLS-EIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 285 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
|++|++++|++.+..|..|.++++|+.|++++|.++ +.+|..+..++.|+.|+++.+.+.
T Consensus 423 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~ 483 (570)
T 2z63_A 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLE 483 (570)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCC
T ss_pred CCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccc
Confidence 999999999999888999999999999999999997 578888999999999998876654
No 20
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1e-33 Score=310.13 Aligned_cols=322 Identities=21% Similarity=0.240 Sum_probs=199.8
Q ss_pred chhhhcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCC
Q 035895 16 TGDVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMS 88 (527)
Q Consensus 16 ~~~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~ 88 (527)
+.++..++..+| ++|.++++++..|.++++|++|+|++|.+.+..+. .++.|+|++|.++.+++. +|.
T Consensus 20 p~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~-----~~~ 94 (680)
T 1ziw_A 20 PDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDK-----TFA 94 (680)
T ss_dssp CSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTT-----TTT
T ss_pred ccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChh-----hhc
Confidence 334446777888 88888888888888888888888888887766553 367888888888876543 467
Q ss_pred CCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCccccc--CCCCC
Q 035895 89 NCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLG--KLQKL 166 (527)
Q Consensus 89 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~--~l~~L 166 (527)
++++|++|++++|++++..|..+..+. +|++|++++|.+++..|..+..+++|++|++++|++++..+..+. .+++|
T Consensus 95 ~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L 173 (680)
T 1ziw_A 95 FCTNLTELHLMSNSIQKIKNNPFVKQK-NLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSL 173 (680)
T ss_dssp TCTTCSEEECCSSCCCCCCSCTTTTCT-TCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEE
T ss_pred cCCCCCEEECCCCccCccChhHccccC-CCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccc
Confidence 788888888888888776666676664 688888888888777777777788888888888877766655443 34667
Q ss_pred CEEeccCcccccccChhhhcC---------------------------cccCeeeeecccCCCCCCccccCCcc--Ccee
Q 035895 167 QFLSFRGNELEGSIPNVLCHL---------------------------AVLFQLDLRGNKLSGSIPTCFGNLTA--LRNL 217 (527)
Q Consensus 167 ~~L~l~~N~l~~~~p~~~~~l---------------------------~~L~~L~L~~N~l~~~~p~~~~~l~~--L~~L 217 (527)
+.|++++|.+++..|..|..+ ++|+.|++++|.+++..|..|.+++. |++|
T Consensus 174 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L 253 (680)
T 1ziw_A 174 KKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTML 253 (680)
T ss_dssp SEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEE
T ss_pred cEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEE
Confidence 777777776665555444332 22334444444444444444444432 4444
Q ss_pred eCCCCCCCCCc-hhhhCCCCccEEEccCCcccccCCc---------------------------------cccCCCCCCE
Q 035895 218 HLDSNELTSIP-SILWNLKDILYLDFWSNLFVGPLPS---------------------------------KIGNLKVLTR 263 (527)
Q Consensus 218 ~L~~N~l~~lp-~~~~~l~~L~~l~l~~n~~~~~~p~---------------------------------~~~~l~~L~~ 263 (527)
++++|+++.++ ..+..+++|++|++++|.+.+..|. .|..+++|++
T Consensus 254 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~ 333 (680)
T 1ziw_A 254 DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEH 333 (680)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCE
T ss_pred ECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCE
Confidence 44444444432 2334444444444444444333332 3444555666
Q ss_pred EEccCCCCCCCChhhhhcCCCCCEEEcc----------------------------cccceeecCCCCCCCCCCCEEeCC
Q 035895 264 IDFSRNNLLGDIPTTIQGLKSLQFLSLG----------------------------HNRLQGSIPNSFDDLVSLESLDLS 315 (527)
Q Consensus 264 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~----------------------------~N~l~~~~p~~~~~l~~L~~L~ls 315 (527)
|++++|.+.+..|..|.++++|++|+++ +|++++..|..|..+++|+.|+++
T Consensus 334 L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 413 (680)
T 1ziw_A 334 LNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLG 413 (680)
T ss_dssp EECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred EECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCC
Confidence 6666666665555555555555554444 444555555666666666666666
Q ss_pred CCcccccCc-cchhhhccCCeeEeeeeee
Q 035895 316 NNNLSEIIP-LSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 316 ~N~l~~~~p-~~~~~l~~L~~L~~~~~~~ 343 (527)
+|.+++.+| ..+..+..|+.|+++.+.+
T Consensus 414 ~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l 442 (680)
T 1ziw_A 414 LNEIGQELTGQEWRGLENIFEIYLSYNKY 442 (680)
T ss_dssp SSCCEEECCSGGGTTCTTCCEEECCSCSE
T ss_pred CCcCccccCcccccCcccccEEecCCCCc
Confidence 666665433 4566666666666655443
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.2e-33 Score=301.85 Aligned_cols=155 Identities=26% Similarity=0.337 Sum_probs=104.1
Q ss_pred hcCcccCeeeeecccCCCCCC---ccccCCccCceeeCCCCCCCCCch---hhhCCCCccEEEccCCcccccCCccccCC
Q 035895 185 CHLAVLFQLDLRGNKLSGSIP---TCFGNLTALRNLHLDSNELTSIPS---ILWNLKDILYLDFWSNLFVGPLPSKIGNL 258 (527)
Q Consensus 185 ~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~lp~---~~~~l~~L~~l~l~~n~~~~~~p~~~~~l 258 (527)
..+++|+.|++++|++++..| ..++.+++|++|++++|+++++|. .+..+++|++|++++|++. .+|..+..+
T Consensus 331 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~ 409 (549)
T 2z81_A 331 QHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWP 409 (549)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCC
T ss_pred hcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhccc
Confidence 467778888888888876553 346777888888888888887753 4677788888888888777 567777777
Q ss_pred CCCCEEEccCCCCCCCChhhh------------------hcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCccc
Q 035895 259 KVLTRIDFSRNNLLGDIPTTI------------------QGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLS 320 (527)
Q Consensus 259 ~~L~~L~Ls~N~l~~~~p~~~------------------~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 320 (527)
++|++|++++|.+.+ +|..+ ..+++|++|++++|+++ .+|. ...+++|+.|++++|+++
T Consensus 410 ~~L~~L~Ls~N~l~~-l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~ 486 (549)
T 2z81_A 410 EKMRFLNLSSTGIRV-VKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLK 486 (549)
T ss_dssp TTCCEEECTTSCCSC-CCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCC
T ss_pred ccccEEECCCCCccc-ccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccC
Confidence 777777777777753 23222 24556666666666665 3443 345566666666666666
Q ss_pred ccCccchhhhccCCeeEeeeeee
Q 035895 321 EIIPLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 321 ~~~p~~~~~l~~L~~L~~~~~~~ 343 (527)
+.+|..+..++.|+.|+++.+.+
T Consensus 487 ~~~~~~~~~l~~L~~L~l~~N~~ 509 (549)
T 2z81_A 487 SVPDGIFDRLTSLQKIWLHTNPW 509 (549)
T ss_dssp CCCTTGGGGCTTCCEEECCSSCB
T ss_pred CcCHHHHhcCcccCEEEecCCCc
Confidence 66666666666666666665554
No 22
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-33 Score=314.42 Aligned_cols=297 Identities=22% Similarity=0.229 Sum_probs=177.6
Q ss_pred hhcchhccc-CCCceeecCchhhhcCCCCCEEEccccccccccc-------cccceEEcccccccCCCCCCcccccCCCC
Q 035895 19 VCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS-------SIVDELSLSDNYLTSSTPELSFLSSMSNC 90 (527)
Q Consensus 19 ~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~-------~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l 90 (527)
....+..+| ++|.++++.+..|.++++|++|||++|...+.++ ..++.|+|++|.++...+. .|.++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~-----~~~~l 96 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD-----AFQGL 96 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT-----SSCSC
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh-----HccCC
Confidence 334566666 6777777777777777777777777775443332 1356677777776655332 46666
Q ss_pred CCCCEEEcccCCCCcccChh--HhhccccccEEEcccCccccccc-hhhcCCcCCcEEEeecCcccccCcccccCC--CC
Q 035895 91 KYLKKLDISRNPLDGFLPRV--VGNFSQSLEFIWMSDCNISGGIS-EEIGNLTDLISIDLGGNKLNGSISITLGKL--QK 165 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~--~~~~~~~L~~L~Ls~n~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l--~~ 165 (527)
++|++|+|++|.+++..|.. +..+. +|++|+|++|.+++..+ ..|.++++|++|+|++|.+++..+..+..+ ++
T Consensus 97 ~~L~~L~Ls~n~l~~~~~~~~~~~~L~-~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~ 175 (844)
T 3j0a_A 97 FHLFELRLYFCGLSDAVLKDGYFRNLK-ALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKT 175 (844)
T ss_dssp SSCCCEECTTCCCSSCCSTTCCCSSCS-SCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCS
T ss_pred cccCEeeCcCCCCCcccccCccccccC-CCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCc
Confidence 77777777777776544433 44443 57777777777665543 456677777777777777766666666655 66
Q ss_pred CCEEeccCcccccccChhhhcCcc------cCeeeeecccCCCCCCccccC-----------------------------
Q 035895 166 LQFLSFRGNELEGSIPNVLCHLAV------LFQLDLRGNKLSGSIPTCFGN----------------------------- 210 (527)
Q Consensus 166 L~~L~l~~N~l~~~~p~~~~~l~~------L~~L~L~~N~l~~~~p~~~~~----------------------------- 210 (527)
|+.|++++|.+.+..|..+..+.+ |+.|++++|.+++..|..+..
T Consensus 176 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~ 255 (844)
T 3j0a_A 176 LSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDP 255 (844)
T ss_dssp SCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTG
T ss_pred cceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCC
Confidence 666666666666655555444443 666666666655444433321
Q ss_pred ---------CccCceeeCCCCCCCCC-chhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhh
Q 035895 211 ---------LTALRNLHLDSNELTSI-PSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQ 280 (527)
Q Consensus 211 ---------l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 280 (527)
.++|+.|++++|.++.+ |..+..+++|+.|++++|.+.+..|..|..+++|++|+|++|.+.+..|..|.
T Consensus 256 ~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 335 (844)
T 3j0a_A 256 DQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFY 335 (844)
T ss_dssp GGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCS
T ss_pred ChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhc
Confidence 13455556665555553 33445555566666666655555555555566666666666665555555555
Q ss_pred cCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccc
Q 035895 281 GLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSE 321 (527)
Q Consensus 281 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 321 (527)
++++|++|++++|++.+..+..|..+++|+.|++++|.+++
T Consensus 336 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~ 376 (844)
T 3j0a_A 336 GLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT 376 (844)
T ss_dssp SCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC
T ss_pred CCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc
Confidence 56666666666666555555555555666666666665554
No 23
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.5e-34 Score=282.23 Aligned_cols=248 Identities=27% Similarity=0.482 Sum_probs=127.2
Q ss_pred cceEEcccccccCCCCCCcccccCCCCCCCCEEEccc-CCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCC
Q 035895 64 VDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISR-NPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDL 142 (527)
Q Consensus 64 l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 142 (527)
++.|+|++|.+++. ...+..+.++++|++|++++ |.+.+.+|..+..+. +|++|+|++|.+++..|..+..+++|
T Consensus 52 l~~L~L~~~~l~~~---~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~-~L~~L~Ls~n~l~~~~p~~~~~l~~L 127 (313)
T 1ogq_A 52 VNNLDLSGLNLPKP---YPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLT-QLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp EEEEEEECCCCSSC---EECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCT-TCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred EEEEECCCCCccCC---cccChhHhCCCCCCeeeCCCCCcccccCChhHhcCC-CCCEEECcCCeeCCcCCHHHhCCCCC
Confidence 44555555555430 00112344555555555553 555555555554443 45555555555555555555555555
Q ss_pred cEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCc-ccCeeeeecccCCCCCCccccCCccCceeeCCC
Q 035895 143 ISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLA-VLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDS 221 (527)
Q Consensus 143 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 221 (527)
++|++++|++++..|..+..+++|++|++++|++++.+|..+..++ .|+.|++++|++++..|..|..++ |++|++++
T Consensus 128 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~ 206 (313)
T 1ogq_A 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSR 206 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCS
T ss_pred CEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcC
Confidence 5555555555555555555555555555555555555555555554 555555555555555555555554 55555555
Q ss_pred CCCCC-CchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecC
Q 035895 222 NELTS-IPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300 (527)
Q Consensus 222 N~l~~-lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 300 (527)
|++++ +|..+..+++|+.|++++|.+.+.+|. +..+++|++|++++|++++.+|..|..+++|++|++++|++++.+|
T Consensus 207 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip 285 (313)
T 1ogq_A 207 NMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285 (313)
T ss_dssp SEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECC
T ss_pred CcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCC
Confidence 55543 334444455555555555555444333 4445555555555555554555555555555555555555555554
Q ss_pred CCCCCCCCCCEEeCCCCc
Q 035895 301 NSFDDLVSLESLDLSNNN 318 (527)
Q Consensus 301 ~~~~~l~~L~~L~ls~N~ 318 (527)
.. ..+++|+.|++++|+
T Consensus 286 ~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 286 QG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp CS-TTGGGSCGGGTCSSS
T ss_pred CC-ccccccChHHhcCCC
Confidence 43 445555555555554
No 24
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.7e-34 Score=282.12 Aligned_cols=249 Identities=26% Similarity=0.425 Sum_probs=224.1
Q ss_pred cchhccc-CCCceee--cCchhhhcCCCCCEEEccc-cccccccccccceEEcccccccCCCCCCcccccCCCCCCCCEE
Q 035895 21 YRICTID-SQNKLVG--IVSITIFNLSTLKVFDVDN-NYVLGRLSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKL 96 (527)
Q Consensus 21 ~~~~~~~-s~N~l~~--~~~~~~~~l~~L~~L~Ls~-N~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L 96 (527)
.++..++ ++|.+++ .+|..|.++++|++|++++ |.+.+.+| ..|.++++|++|
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p-----------------------~~l~~l~~L~~L 106 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIP-----------------------PAIAKLTQLHYL 106 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCC-----------------------GGGGGCTTCSEE
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCC-----------------------hhHhcCCCCCEE
Confidence 3566677 7777777 6777777888888877774 65554433 246778999999
Q ss_pred EcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCC-CCCEEeccCcc
Q 035895 97 DISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQ-KLQFLSFRGNE 175 (527)
Q Consensus 97 ~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~ 175 (527)
+|++|++++.+|..+..+. +|++|++++|.+++.+|..+..+++|++|++++|++++..|..+..++ +|+.|++++|+
T Consensus 107 ~Ls~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 107 YITHTNVSGAIPDFLSQIK-TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp EEEEECCEEECCGGGGGCT-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE
T ss_pred ECcCCeeCCcCCHHHhCCC-CCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCe
Confidence 9999999998999998875 799999999999999999999999999999999999999999999998 99999999999
Q ss_pred cccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccc
Q 035895 176 LEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKI 255 (527)
Q Consensus 176 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~ 255 (527)
+++..|..|..+. |+.|++++|++++..|..|..+++|+.|++++|+++..++.+..+++|++|++++|.+.+.+|..+
T Consensus 186 l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 264 (313)
T 1ogq_A 186 LTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGL 264 (313)
T ss_dssp EEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGG
T ss_pred eeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHH
Confidence 9999999999998 999999999999999999999999999999999999877778889999999999999999999999
Q ss_pred cCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccc
Q 035895 256 GNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRL 295 (527)
Q Consensus 256 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 295 (527)
..+++|++|++++|++++.+|.. ..+++|+.|++++|+.
T Consensus 265 ~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~ 303 (313)
T 1ogq_A 265 TQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKC 303 (313)
T ss_dssp GGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSE
T ss_pred hcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCC
Confidence 99999999999999999999886 8899999999999983
No 25
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=7.7e-33 Score=309.85 Aligned_cols=309 Identities=21% Similarity=0.236 Sum_probs=270.3
Q ss_pred ccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEccccccc-CCCCCCcccccCCCCCCCCEE
Q 035895 25 TID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLT-SSTPELSFLSSMSNCKYLKKL 96 (527)
Q Consensus 25 ~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~-~~~~~~~~~~~~~~l~~L~~L 96 (527)
.+| ++++++.+++ -.++|++|||++|.+.+..+. .++.|+|++|.+. .+++ ..|.++++|++|
T Consensus 8 ~~dcs~~~L~~vP~----lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~-----~~f~~L~~L~~L 78 (844)
T 3j0a_A 8 IAFYRFCNLTQVPQ----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDK-----EAFRNLPNLRIL 78 (844)
T ss_dssp EEEESCCCSSCCCS----SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECT-----TTTSSCTTCCEE
T ss_pred EEEccCCCCCCCCC----CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCH-----HHhcCCCCCCEE
Confidence 344 6788888876 458999999999999876553 4789999999543 3323 368999999999
Q ss_pred EcccCCCCcccChhHhhccccccEEEcccCccccccchh--hcCCcCCcEEEeecCcccccCc-ccccCCCCCCEEeccC
Q 035895 97 DISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEE--IGNLTDLISIDLGGNKLNGSIS-ITLGKLQKLQFLSFRG 173 (527)
Q Consensus 97 ~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~--~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~ 173 (527)
+|++|++++..|..|..+. +|++|+|++|.+++..|.. +..+++|++|+|++|.+++..+ ..|+.+++|+.|++++
T Consensus 79 ~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~ 157 (844)
T 3j0a_A 79 DLGSSKIYFLHPDAFQGLF-HLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSS 157 (844)
T ss_dssp ECTTCCCCEECTTSSCSCS-SCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEES
T ss_pred ECCCCcCcccCHhHccCCc-ccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCC
Confidence 9999999999899998875 7999999999999866655 8999999999999999987654 5799999999999999
Q ss_pred cccccccChhhhcC--cccCeeeeecccCCCCCCccccCCcc------CceeeCCCCCCCC-CchhhhC-----------
Q 035895 174 NELEGSIPNVLCHL--AVLFQLDLRGNKLSGSIPTCFGNLTA------LRNLHLDSNELTS-IPSILWN----------- 233 (527)
Q Consensus 174 N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~------L~~L~L~~N~l~~-lp~~~~~----------- 233 (527)
|.+++..|..+..+ ++|+.|++++|.+.+..|..++.+++ |+.|++++|.++. +|..+..
T Consensus 158 N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~ 237 (844)
T 3j0a_A 158 NQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLI 237 (844)
T ss_dssp SCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEE
T ss_pred CcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCccccccee
Confidence 99999999999888 89999999999999988888777766 9999999998764 3322211
Q ss_pred ---------------------------CCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCC
Q 035895 234 ---------------------------LKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQ 286 (527)
Q Consensus 234 ---------------------------l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 286 (527)
.++|+.|++++|.+.+..|..|..+++|+.|+|++|.+.+..|..|.++++|+
T Consensus 238 l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~ 317 (844)
T 3j0a_A 238 LAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQ 317 (844)
T ss_dssp CCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCC
T ss_pred cccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCC
Confidence 25799999999999999999999999999999999999999999999999999
Q ss_pred EEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeee
Q 035895 287 FLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 287 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~ 343 (527)
+|+|++|++++..|..|..+++|+.|++++|.++++.+..+..++.|+.|+++.+.+
T Consensus 318 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l 374 (844)
T 3j0a_A 318 VLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNAL 374 (844)
T ss_dssp EEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCS
T ss_pred EEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCC
Confidence 999999999988899999999999999999999999999999999999999987654
No 26
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=5.1e-33 Score=297.75 Aligned_cols=312 Identities=19% Similarity=0.151 Sum_probs=203.3
Q ss_pred ccchhhhcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCccccc
Q 035895 14 GMTGDVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSS 86 (527)
Q Consensus 14 ~~~~~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~ 86 (527)
...+..|.....+| ++|+++++++..+ ++|++|+|++|.+.+..+. .++.|+|++|.|+++.+. .
T Consensus 24 ~~~~~~~~~~~~l~ls~~~L~~ip~~~~---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-----~ 95 (562)
T 3a79_B 24 SMTPFSNELESMVDYSNRNLTHVPKDLP---PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFH-----V 95 (562)
T ss_dssp ---------CCEEECTTSCCCSCCTTSC---TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTT-----T
T ss_pred cccccccCCCcEEEcCCCCCccCCCCCC---CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHH-----H
Confidence 34455666667788 8999998665433 8999999999999876543 478999999999987553 5
Q ss_pred CCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCcccccc-chhhcCCcCCcEEEeecCcccccCcccccCCCC
Q 035895 87 MSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGI-SEEIGNLTDLISIDLGGNKLNGSISITLGKLQK 165 (527)
Q Consensus 87 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 165 (527)
|.++++|++|||++|+++.+ |.. .+ ++|++|++++|.+++.. |..|.++++|++|++++|++++. .+..+++
T Consensus 96 ~~~l~~L~~L~Ls~N~l~~l-p~~--~l-~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~ 168 (562)
T 3a79_B 96 FLFNQDLEYLDVSHNRLQNI-SCC--PM-ASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAH 168 (562)
T ss_dssp TTTCTTCCEEECTTSCCCEE-CSC--CC-TTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTT
T ss_pred hCCCCCCCEEECCCCcCCcc-Ccc--cc-ccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhh
Confidence 88999999999999999964 544 44 58999999999999754 68999999999999999999863 4556666
Q ss_pred C--CEEeccCccc--ccccChhhhcCc-----------------------------------------------------
Q 035895 166 L--QFLSFRGNEL--EGSIPNVLCHLA----------------------------------------------------- 188 (527)
Q Consensus 166 L--~~L~l~~N~l--~~~~p~~~~~l~----------------------------------------------------- 188 (527)
| +.|++++|.+ ++..|..|..+.
T Consensus 169 L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l 248 (562)
T 3a79_B 169 LHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRG 248 (562)
T ss_dssp SCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSC
T ss_pred ceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhcc
Confidence 6 9999999998 666665555433
Q ss_pred ----------------------------ccCeeeeecccCCCCCCccc-----cCCcc----------------------
Q 035895 189 ----------------------------VLFQLDLRGNKLSGSIPTCF-----GNLTA---------------------- 213 (527)
Q Consensus 189 ----------------------------~L~~L~L~~N~l~~~~p~~~-----~~l~~---------------------- 213 (527)
+|++|++++|++++.+|..+ .+++.
T Consensus 249 ~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~ 328 (562)
T 3a79_B 249 PTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVF 328 (562)
T ss_dssp SSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHH
T ss_pred CcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhh
Confidence 67778888888887777665 33332
Q ss_pred ----CceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCC--hhhhhcCCCCCE
Q 035895 214 ----LRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDI--PTTIQGLKSLQF 287 (527)
Q Consensus 214 ----L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~ 287 (527)
|+.|++++|.+..++. ...+++|++|++++|.+.+..|..++.+++|++|++++|++.+.. |..|.++++|++
T Consensus 329 ~~~~L~~L~l~~n~~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~ 407 (562)
T 3a79_B 329 AEMNIKMLSISDTPFIHMVC-PPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLET 407 (562)
T ss_dssp HTCCCSEEEEESSCCCCCCC-CSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCE
T ss_pred ccCcceEEEccCCCcccccC-ccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCE
Confidence 2223333333222110 034455666666666666555555666666666666666655422 344556666666
Q ss_pred EEcccccceeecC-CCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeee
Q 035895 288 LSLGHNRLQGSIP-NSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 288 L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~ 343 (527)
|++++|++++.+| ..|..+++|+.|++++|++++..|..+. ..|+.|+++.+.+
T Consensus 408 L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l 462 (562)
T 3a79_B 408 LDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRI 462 (562)
T ss_dssp EECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCC
T ss_pred EECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcC
Confidence 6666666655233 3355555555566655555554444332 3455555554433
No 27
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.1e-33 Score=293.37 Aligned_cols=295 Identities=20% Similarity=0.217 Sum_probs=233.9
Q ss_pred hhcchhccc-CCCceeecCchhhhcCCCCCEEEccccccccccc---cccceEEcccccccCCCCCCcccccCCCCCCCC
Q 035895 19 VCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS---SIVDELSLSDNYLTSSTPELSFLSSMSNCKYLK 94 (527)
Q Consensus 19 ~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~---~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~ 94 (527)
.+.++..++ ++|+++++.|.+|.++++|++|||++|.+....+ ..+++|+|++|.+++.+. +..|.++++|+
T Consensus 43 ~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~l~~L~~L~L~~N~l~~~~~----p~~~~~l~~L~ 118 (520)
T 2z7x_B 43 SLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVKISCHPTVNLKHLDLSFNAFDALPI----CKEFGNMSQLK 118 (520)
T ss_dssp TCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCEEECCCCCCCSEEECCSSCCSSCCC----CGGGGGCTTCC
T ss_pred ccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceeecCccccCCccEEeccCCccccccc----hhhhccCCcce
Confidence 356788899 9999999999999999999999999999874322 358899999999987432 23577888888
Q ss_pred EEEcccCCCCcccChhHhhccccc--cEEEcccCcc--ccccchhhcCCc------------------------------
Q 035895 95 KLDISRNPLDGFLPRVVGNFSQSL--EFIWMSDCNI--SGGISEEIGNLT------------------------------ 140 (527)
Q Consensus 95 ~L~Ls~N~l~~~~~~~~~~~~~~L--~~L~Ls~n~l--~~~~~~~~~~l~------------------------------ 140 (527)
+|++++|++++. .+..+. +| +.|++++|.+ .+..|..+..+.
T Consensus 119 ~L~L~~n~l~~~---~~~~l~-~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~ 194 (520)
T 2z7x_B 119 FLGLSTTHLEKS---SVLPIA-HLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLEL 194 (520)
T ss_dssp EEEEEESSCCGG---GGGGGT-TSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEE
T ss_pred EEEecCcccchh---hccccc-cceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceee
Confidence 888888887652 222222 34 5555555555 333333333321
Q ss_pred -----------------------------------------------------CCcEEEeecCcccccCcccc-------
Q 035895 141 -----------------------------------------------------DLISIDLGGNKLNGSISITL------- 160 (527)
Q Consensus 141 -----------------------------------------------------~L~~L~L~~N~l~~~~~~~~------- 160 (527)
+|++|++++|++++.+|..+
T Consensus 195 L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~ 274 (520)
T 2z7x_B 195 SNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTS 274 (520)
T ss_dssp CCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCC
T ss_pred ccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhccccc
Confidence 45555555555554333322
Q ss_pred ----------------------------------------------cCCCCCCEEeccCcccccccChhhhcCcccCeee
Q 035895 161 ----------------------------------------------GKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLD 194 (527)
Q Consensus 161 ----------------------------------------------~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 194 (527)
..+++|+.|++++|++++..|..+..+++|+.|+
T Consensus 275 l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 354 (520)
T 2z7x_B 275 LKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLI 354 (520)
T ss_dssp CCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEE
T ss_pred CceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEE
Confidence 6788999999999999988999999999999999
Q ss_pred eecccCCC--CCCccccCCccCceeeCCCCCCCC-Cchh-hhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCC
Q 035895 195 LRGNKLSG--SIPTCFGNLTALRNLHLDSNELTS-IPSI-LWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNN 270 (527)
Q Consensus 195 L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~-lp~~-~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~ 270 (527)
+++|++++ ..|..|+.+++|++|++++|++++ +|.. +..+++|++|++++|.+.+..|..+. ++|++|++++|+
T Consensus 355 L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~ 432 (520)
T 2z7x_B 355 LQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNK 432 (520)
T ss_dssp CCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSC
T ss_pred ccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCc
Confidence 99999997 456789999999999999999998 8875 67789999999999999888877665 789999999999
Q ss_pred CCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCc
Q 035895 271 LLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 324 (527)
Q Consensus 271 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 324 (527)
++ .+|..+..+++|++|++++|+++...+..|..+++|+.|++++|+++...+
T Consensus 433 l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 433 IK-SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cc-ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccCC
Confidence 98 788888899999999999999995444459999999999999999987543
No 28
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=2e-32 Score=275.04 Aligned_cols=304 Identities=21% Similarity=0.311 Sum_probs=249.9
Q ss_pred ccchhhhcchhccc-CCCceeecCchhhhcCCCCCEEEccccccccccc----cccceEEcccccccCCCCCCcccccCC
Q 035895 14 GMTGDVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS----SIVDELSLSDNYLTSSTPELSFLSSMS 88 (527)
Q Consensus 14 ~~~~~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~----~~l~~L~Ls~N~l~~~~~~~~~~~~~~ 88 (527)
-.....+..+..++ ++|.+..+. .+..+++|++|++++|.+....+ ..++.|+|++|.++.+ +.+.
T Consensus 37 ~~~~~~l~~L~~L~l~~~~i~~~~--~~~~~~~L~~L~l~~n~i~~~~~~~~l~~L~~L~L~~n~i~~~-------~~~~ 107 (347)
T 4fmz_A 37 VVTQEELESITKLVVAGEKVASIQ--GIEYLTNLEYLNLNGNQITDISPLSNLVKLTNLYIGTNKITDI-------SALQ 107 (347)
T ss_dssp EECHHHHTTCSEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC-------GGGT
T ss_pred cccchhcccccEEEEeCCccccch--hhhhcCCccEEEccCCccccchhhhcCCcCCEEEccCCcccCc-------hHHc
Confidence 34445666778888 778887764 38889999999999998765332 2478999999988764 2478
Q ss_pred CCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCE
Q 035895 89 NCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQF 168 (527)
Q Consensus 89 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 168 (527)
.+++|++|++++|++++..+ +..+ ++|+.|++++|.....++ .+..+++|++|++++|.+.+..+ +..+++|+.
T Consensus 108 ~l~~L~~L~l~~n~i~~~~~--~~~l-~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~ 181 (347)
T 4fmz_A 108 NLTNLRELYLNEDNISDISP--LANL-TKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYS 181 (347)
T ss_dssp TCTTCSEEECTTSCCCCCGG--GTTC-TTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSE
T ss_pred CCCcCCEEECcCCcccCchh--hccC-CceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCE
Confidence 89999999999999987533 5555 479999999996654444 48899999999999999986544 788999999
Q ss_pred EeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCccc
Q 035895 169 LSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFV 248 (527)
Q Consensus 169 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~ 248 (527)
|++++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|+++.+|. +..+++|++|++++|.+.
T Consensus 182 L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~ 256 (347)
T 4fmz_A 182 LSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQIS 256 (347)
T ss_dssp EECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCC
T ss_pred EEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccC
Confidence 9999999985433 8889999999999999986554 8889999999999999999887 888899999999999887
Q ss_pred ccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchh
Q 035895 249 GPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLE 328 (527)
Q Consensus 249 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~ 328 (527)
+. +.+..+++|++|++++|.+.+. +.+..+++|++|++++|++++..|..|..+++|+.|++++|++++..| +.
T Consensus 257 ~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~ 330 (347)
T 4fmz_A 257 DI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LA 330 (347)
T ss_dssp CC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GG
T ss_pred CC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hh
Confidence 64 5688899999999999999864 468899999999999999998888889999999999999999998777 78
Q ss_pred hhccCCeeEeeeeee
Q 035895 329 KLLYLNILLIVVVIL 343 (527)
Q Consensus 329 ~l~~L~~L~~~~~~~ 343 (527)
.++.|+.|+++.+.+
T Consensus 331 ~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 331 SLSKMDSADFANQVI 345 (347)
T ss_dssp GCTTCSEESSSCC--
T ss_pred hhhccceeehhhhcc
Confidence 888999888776553
No 29
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.1e-32 Score=272.06 Aligned_cols=282 Identities=20% Similarity=0.272 Sum_probs=234.6
Q ss_pred CCCEEEccccccccc---cccccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEE
Q 035895 45 TLKVFDVDNNYVLGR---LSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFI 121 (527)
Q Consensus 45 ~L~~L~Ls~N~~~~~---~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L 121 (527)
+++.+++++|.+... +++.++.|+|++|.++.+++. .|.++++|++|++++|++++..|..+..+. +|++|
T Consensus 34 ~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L 107 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKD-----DFKGLQHLYALVLVNNKISKIHEKAFSPLR-KLQKL 107 (332)
T ss_dssp ETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTT-----TTTTCTTCCEEECCSSCCCEECGGGSTTCT-TCCEE
T ss_pred cCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHh-----HhhCCCCCcEEECCCCccCccCHhHhhCcC-CCCEE
Confidence 688899998876532 234678899999998876543 578899999999999999988788887775 79999
Q ss_pred EcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccc--cccChhhhcCcccCeeeeeccc
Q 035895 122 WMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELE--GSIPNVLCHLAVLFQLDLRGNK 199 (527)
Q Consensus 122 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~L~L~~N~ 199 (527)
++++|.++.. |..+. ++|++|++++|++++..+..|..+++|+.|++++|.++ +..|..|..+ +|+.|++++|+
T Consensus 108 ~L~~n~l~~l-~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~ 183 (332)
T 2ft3_A 108 YISKNHLVEI-PPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAK 183 (332)
T ss_dssp ECCSSCCCSC-CSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSB
T ss_pred ECCCCcCCcc-Ccccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCC
Confidence 9999999854 44333 78999999999999877778899999999999999986 3667778888 89999999999
Q ss_pred CCCCCCccccCCccCceeeCCCCCCCCCc-hhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhh
Q 035895 200 LSGSIPTCFGNLTALRNLHLDSNELTSIP-SILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTT 278 (527)
Q Consensus 200 l~~~~p~~~~~l~~L~~L~L~~N~l~~lp-~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 278 (527)
+++ +|..+. ++|++|++++|+++.++ ..+..+++|+.|++++|.+.+..+..+..+++|++|++++|++. .+|..
T Consensus 184 l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 259 (332)
T 2ft3_A 184 LTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG 259 (332)
T ss_dssp CSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT
T ss_pred CCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh
Confidence 986 454443 68999999999999876 56788899999999999999888888999999999999999997 68888
Q ss_pred hhcCCCCCEEEcccccceeecCCCCCCC------CCCCEEeCCCCccc--ccCccchhhhccCCeeEeee
Q 035895 279 IQGLKSLQFLSLGHNRLQGSIPNSFDDL------VSLESLDLSNNNLS--EIIPLSLEKLLYLNILLIVV 340 (527)
Q Consensus 279 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~ls~N~l~--~~~p~~~~~l~~L~~L~~~~ 340 (527)
+..+++|++|++++|++++..+..|... ..|+.|++++|++. ++.|..+..++.|+.++++.
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~ 329 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGN 329 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC--
T ss_pred hhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccc
Confidence 9999999999999999998777777653 67899999999987 67788888899998887654
No 30
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.8e-32 Score=280.04 Aligned_cols=261 Identities=22% Similarity=0.228 Sum_probs=119.6
Q ss_pred cceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCc
Q 035895 64 VDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLI 143 (527)
Q Consensus 64 l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 143 (527)
++.|+|++|.++.+++. .|..+++|++|++++|++++..|..+..+. +|++|++++|.++..++..|..+++|+
T Consensus 71 L~~L~L~~n~i~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~l~~~~~~~l~~L~ 144 (390)
T 3o6n_A 71 VELLNLNDLQIEEIDTY-----AFAYAHTIQKLYMGFNAIRYLPPHVFQNVP-LLTVLVLERNDLSSLPRGIFHNTPKLT 144 (390)
T ss_dssp CSEEECTTSCCCEECTT-----TTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CcEEECCCCcccccChh-----hccCCCCcCEEECCCCCCCcCCHHHhcCCC-CCCEEECCCCccCcCCHHHhcCCCCCc
Confidence 44445555544443321 244445555555555555544444444432 455555555555443333344455555
Q ss_pred EEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCee-------------------eeecccCCCCC
Q 035895 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQL-------------------DLRGNKLSGSI 204 (527)
Q Consensus 144 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L-------------------~L~~N~l~~~~ 204 (527)
+|++++|++++..+..+..+++|+.|++++|.+++. .+..+++|+.| ++++|.+....
T Consensus 145 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~ 221 (390)
T 3o6n_A 145 TLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVR 221 (390)
T ss_dssp EEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEE
T ss_pred EEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccccCCCCcceEEECCCCeeeecc
Confidence 555555555444444445555555555555554432 12334444444 44444444321
Q ss_pred CccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCC
Q 035895 205 PTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKS 284 (527)
Q Consensus 205 p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 284 (527)
.. ..++|+.|++++|.++.++ .+..+++|++|++++|.+.+..|..+..+++|++|++++|++.+ +|..+..+++
T Consensus 222 ~~---~~~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~ 296 (390)
T 3o6n_A 222 GP---VNVELTILKLQHNNLTDTA-WLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPT 296 (390)
T ss_dssp CC---CCSSCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTT
T ss_pred cc---ccccccEEECCCCCCcccH-HHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCC
Confidence 11 1234455555555554432 34444455555555555444444445555555555555554442 3333444445
Q ss_pred CCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeee
Q 035895 285 LQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVI 342 (527)
Q Consensus 285 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~ 342 (527)
|++|++++|+++ .+|..+..+++|+.|++++|+++... +..++.|+.|+++.+.
T Consensus 297 L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~ 350 (390)
T 3o6n_A 297 LKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHND 350 (390)
T ss_dssp CCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSC
T ss_pred CCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhhccCCEEEcCCCC
Confidence 555555555544 23333444445555555555544331 3334444444444443
No 31
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.3e-33 Score=296.16 Aligned_cols=316 Identities=20% Similarity=0.243 Sum_probs=243.8
Q ss_pred hhcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCCC
Q 035895 19 VCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNCK 91 (527)
Q Consensus 19 ~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~ 91 (527)
+...+..+| ++|+++++.|.+|.++++|++|+|++|.+.+..+. .++.|+|++|.+++.++. .|.+++
T Consensus 24 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-----~~~~l~ 98 (549)
T 2z81_A 24 LTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSS-----WFGPLS 98 (549)
T ss_dssp CCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHH-----HHTTCT
T ss_pred CCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHH-----HhccCC
Confidence 335788888 88899999888999999999999999988766543 478899999998876542 477889
Q ss_pred CCCEEEcccCCCCcc-cChhHhhccccccEEEcccCc-cccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEE
Q 035895 92 YLKKLDISRNPLDGF-LPRVVGNFSQSLEFIWMSDCN-ISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFL 169 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~-~~~~~~~~~~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 169 (527)
+|++|++++|++++. .|..+..+. +|++|++++|. +....+..+..+++|++|++++|++++..|..+..+++|+.|
T Consensus 99 ~L~~L~Ls~n~l~~~~~~~~~~~l~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L 177 (549)
T 2z81_A 99 SLKYLNLMGNPYQTLGVTSLFPNLT-NLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHL 177 (549)
T ss_dssp TCCEEECTTCCCSSSCSSCSCTTCT-TCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEE
T ss_pred CCcEEECCCCcccccchhhhhhccC-CccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceE
Confidence 999999999998863 455666664 79999999998 454555788899999999999999998888889999999999
Q ss_pred eccCcccccccChhhhcCcccCeeeeecccCCCCC--Ccc----------------------------------------
Q 035895 170 SFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSI--PTC---------------------------------------- 207 (527)
Q Consensus 170 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p~~---------------------------------------- 207 (527)
++++|.+....+..+..+++|+.|++++|++++.. |..
T Consensus 178 ~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~ 257 (549)
T 2z81_A 178 TLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVE 257 (549)
T ss_dssp EEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEE
T ss_pred ecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccc
Confidence 99999886433333467899999999999988631 100
Q ss_pred ------------------------------------------------ccCCccCceeeCCCCCCCCCchhhh-CCCCcc
Q 035895 208 ------------------------------------------------FGNLTALRNLHLDSNELTSIPSILW-NLKDIL 238 (527)
Q Consensus 208 ------------------------------------------------~~~l~~L~~L~L~~N~l~~lp~~~~-~l~~L~ 238 (527)
+..+++|+.|++++|+++.+|..++ .+++|+
T Consensus 258 l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~ip~~~~~~l~~L~ 337 (549)
T 2z81_A 258 FDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFLVPCSFSQHLKSLE 337 (549)
T ss_dssp EESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCCCCHHHHHHCTTCC
T ss_pred cccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccccCCHHHHhcCcccc
Confidence 0112357777777888888887764 688899
Q ss_pred EEEccCCcccccCC---ccccCCCCCCEEEccCCCCCCCCh--hhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEe
Q 035895 239 YLDFWSNLFVGPLP---SKIGNLKVLTRIDFSRNNLLGDIP--TTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLD 313 (527)
Q Consensus 239 ~l~l~~n~~~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 313 (527)
.|++++|.+.+..| ..++.+++|++|++++|++++..+ ..+..+++|++|++++|+++ .+|..+..+++|+.|+
T Consensus 338 ~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~ 416 (549)
T 2z81_A 338 FLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLN 416 (549)
T ss_dssp EEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEE
T ss_pred EEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEE
Confidence 99999998887664 346788889999999998876433 46888899999999999988 6788888888999999
Q ss_pred CCCCcccccCccchhhhccCCeeEeeeeeee
Q 035895 314 LSNNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 314 ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
+++|+++++..... ..|+.|+++.+.+.
T Consensus 417 Ls~N~l~~l~~~~~---~~L~~L~Ls~N~l~ 444 (549)
T 2z81_A 417 LSSTGIRVVKTCIP---QTLEVLDVSNNNLD 444 (549)
T ss_dssp CTTSCCSCCCTTSC---TTCSEEECCSSCCS
T ss_pred CCCCCcccccchhc---CCceEEECCCCChh
Confidence 99998876443222 46677777766543
No 32
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=8.6e-32 Score=281.51 Aligned_cols=299 Identities=27% Similarity=0.376 Sum_probs=203.4
Q ss_pred hhhcchhccc-CCCceeecCchhhhcCCCCCEEEccccccccccc----cccceEEcccccccCCCCCCcccccCCCCCC
Q 035895 18 DVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS----SIVDELSLSDNYLTSSTPELSFLSSMSNCKY 92 (527)
Q Consensus 18 ~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~----~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 92 (527)
..|..+..+| ++|.++++++ |.++++|++|++++|.+.+..+ ..++.|+|++|.++..+ .+..+++
T Consensus 65 ~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~-------~~~~l~~ 135 (466)
T 1o6v_A 65 EYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDID-------PLKNLTN 135 (466)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCG-------GGTTCTT
T ss_pred hhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChhhcCCCCCCEEECCCCCCCCCh-------HHcCCCC
Confidence 3455666677 6777777655 6777777777777776654332 23667777777766542 2456667
Q ss_pred CCEEEcccCCCCcccCh--------------------hHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcc
Q 035895 93 LKKLDISRNPLDGFLPR--------------------VVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKL 152 (527)
Q Consensus 93 L~~L~Ls~N~l~~~~~~--------------------~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 152 (527)
|++|++++|++.+. +. .+..+ ++|+.|++++|.++.. ..+..+++|++|++++|.+
T Consensus 136 L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~~~~~~~~~~~l-~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l 211 (466)
T 1o6v_A 136 LNRLELSSNTISDI-SALSGLTSLQQLSFGNQVTDLKPLANL-TTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQI 211 (466)
T ss_dssp CSEEEEEEEEECCC-GGGTTCTTCSEEEEEESCCCCGGGTTC-TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred CCEEECCCCccCCC-hhhccCCcccEeecCCcccCchhhccC-CCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCcc
Confidence 77777777766543 11 12222 2566666666666543 2356666677777777766
Q ss_pred cccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhh
Q 035895 153 NGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILW 232 (527)
Q Consensus 153 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~ 232 (527)
++..+ ++.+++|+.|++++|.+++. +.+..+++|+.|++++|.+++..| +..+++|+.|++++|.++.+|. +.
T Consensus 212 ~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~ 284 (466)
T 1o6v_A 212 SDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LA 284 (466)
T ss_dssp CCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GT
T ss_pred ccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-cc
Confidence 65444 55667777777777776642 356677777777777777776544 6777777788887777777766 66
Q ss_pred CCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEE
Q 035895 233 NLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESL 312 (527)
Q Consensus 233 ~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 312 (527)
.+++|+.|++++|.+.+..| +..+++|++|++++|++.+..| +..+++|++|++++|++++. ..+..+++|+.|
T Consensus 285 ~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 358 (466)
T 1o6v_A 285 GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWL 358 (466)
T ss_dssp TCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEE
T ss_pred CCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEE
Confidence 77778888888877766443 6777888888888888876555 67778888888888887754 367778888888
Q ss_pred eCCCCcccccCccchhhhccCCeeEeeeeeee
Q 035895 313 DLSNNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 313 ~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
++++|++++..| +..++.|+.|+++.+.+.
T Consensus 359 ~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 359 SAGHNQISDLTP--LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp ECCSSCCCBCGG--GTTCTTCCEEECCCEEEE
T ss_pred eCCCCccCccch--hhcCCCCCEEeccCCccc
Confidence 888888887766 777788888877766654
No 33
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-32 Score=297.60 Aligned_cols=134 Identities=23% Similarity=0.257 Sum_probs=109.2
Q ss_pred chhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCCCCCC
Q 035895 22 RICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNCKYLK 94 (527)
Q Consensus 22 ~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~ 94 (527)
.+..+| ++|+|+++.+.+|.++++|++|||++|.+.+..+. .++.|+|++|+|+.+++. .|.++++|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~-----~f~~L~~L~ 127 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALG-----AFSGLSSLQ 127 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGG-----GGTTCTTCC
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHH-----HhcCCCCCC
Confidence 567788 89999999999999999999999999988765543 378899999999887653 578899999
Q ss_pred EEEcccCCCCcccChhHhhccccccEEEcccCccccc-cchhhcCCcCCcEEEeecCcccccCccccc
Q 035895 95 KLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGG-ISEEIGNLTDLISIDLGGNKLNGSISITLG 161 (527)
Q Consensus 95 ~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 161 (527)
+|+|++|+++++.+..|..+. +|++|+|++|.++.. .|..+..+++|++|++++|++++..+..+.
T Consensus 128 ~L~Ls~N~l~~l~~~~~~~L~-~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~ 194 (635)
T 4g8a_A 128 KLVAVETNLASLENFPIGHLK-TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLR 194 (635)
T ss_dssp EEECTTSCCCCSTTCCCTTCT-TCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGH
T ss_pred EEECCCCcCCCCChhhhhcCc-ccCeeccccCccccCCCchhhccchhhhhhcccCcccccccccccc
Confidence 999999999887666677765 799999999998764 577888899999999999988765554443
No 34
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.7e-32 Score=293.98 Aligned_cols=298 Identities=19% Similarity=0.190 Sum_probs=190.0
Q ss_pred hhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCCCCCCE
Q 035895 23 ICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNCKYLKK 95 (527)
Q Consensus 23 ~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~ 95 (527)
+..++ ++|.+..+++..|.++++|++|+|++|.+.+..+. .++.|+|++|.|+.+++. .|.++++|++
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~ 127 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNVPLLTV 127 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTCTTCCE
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH-----HHcCCCCCCE
Confidence 34444 55666666666667777777777777766554432 356677777776665443 3566667777
Q ss_pred EEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcc
Q 035895 96 LDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNE 175 (527)
Q Consensus 96 L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 175 (527)
|+|++|.++++.+..|..+. +|++|+|++|.+++..|..|..+++|++|++++|.+++.. ++.+++|+.|++++|.
T Consensus 128 L~L~~n~l~~l~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~ 203 (597)
T 3oja_B 128 LVLERNDLSSLPRGIFHNTP-KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNL 203 (597)
T ss_dssp EECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSC
T ss_pred EEeeCCCCCCCCHHHhccCC-CCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCc
Confidence 77777777655444445543 5777777777776666666667777777777777766532 4456666666666666
Q ss_pred cccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccc
Q 035895 176 LEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKI 255 (527)
Q Consensus 176 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~ 255 (527)
+++. .....|+.|++++|.+....+.. .++|+.|+|++|.+++. ..+..+++|+.|++++|.+.+..|..|
T Consensus 204 l~~l-----~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~ 274 (597)
T 3oja_B 204 LSTL-----AIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPF 274 (597)
T ss_dssp CSEE-----ECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGG
T ss_pred cccc-----cCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHh
Confidence 6532 23345666777777666433322 24677777777777664 455666777777777777777767777
Q ss_pred cCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCe
Q 035895 256 GNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNI 335 (527)
Q Consensus 256 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 335 (527)
+.+++|++|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|.+++.. +..++.|+.
T Consensus 275 ~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~ 349 (597)
T 3oja_B 275 VKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKN 349 (597)
T ss_dssp TTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSE
T ss_pred cCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCE
Confidence 777777777777777764 4555666777777777777776 45555666777777777777776543 445556666
Q ss_pred eEeeeeee
Q 035895 336 LLIVVVIL 343 (527)
Q Consensus 336 L~~~~~~~ 343 (527)
|+++.+.+
T Consensus 350 L~l~~N~~ 357 (597)
T 3oja_B 350 LTLSHNDW 357 (597)
T ss_dssp EECCSSCE
T ss_pred EEeeCCCC
Confidence 66666555
No 35
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.9e-31 Score=266.14 Aligned_cols=284 Identities=18% Similarity=0.241 Sum_probs=212.8
Q ss_pred CCCCEEEccccccccc---cccccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccE
Q 035895 44 STLKVFDVDNNYVLGR---LSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEF 120 (527)
Q Consensus 44 ~~L~~L~Ls~N~~~~~---~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~ 120 (527)
.+++.++++++.+... ++..++.|+|++|.++.+++. .|.++++|++|++++|++++..|..+..+. +|++
T Consensus 31 c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~ 104 (330)
T 1xku_A 31 CHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDG-----DFKNLKNLHTLILINNKISKISPGAFAPLV-KLER 104 (330)
T ss_dssp EETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTT-----TTTTCTTCCEEECCSSCCCCBCTTTTTTCT-TCCE
T ss_pred CCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChh-----hhccCCCCCEEECCCCcCCeeCHHHhcCCC-CCCE
Confidence 3577888887766432 334577888888888776542 467788888888888888877777777764 6888
Q ss_pred EEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCccccc--ccChhhhcCcccCeeeeecc
Q 035895 121 IWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEG--SIPNVLCHLAVLFQLDLRGN 198 (527)
Q Consensus 121 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~L~~N 198 (527)
|++++|.++.. |..+. ++|++|++++|++++..+..+..+++|+.|++++|.+.. ..+..|..+++|+.|++++|
T Consensus 105 L~Ls~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n 181 (330)
T 1xku_A 105 LYLSKNQLKEL-PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADT 181 (330)
T ss_dssp EECCSSCCSBC-CSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSS
T ss_pred EECCCCcCCcc-Chhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCC
Confidence 88888888743 33332 678888888888887777778888888888888888753 56777888888888888888
Q ss_pred cCCCCCCccccCCccCceeeCCCCCCCCC-chhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChh
Q 035895 199 KLSGSIPTCFGNLTALRNLHLDSNELTSI-PSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPT 277 (527)
Q Consensus 199 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 277 (527)
.++. +|..+. ++|++|++++|+++++ |..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+. .+|.
T Consensus 182 ~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 257 (330)
T 1xku_A 182 NITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 257 (330)
T ss_dssp CCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred cccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh
Confidence 8875 444333 6788888888888876 566777888888888888888777777888888888888888887 6777
Q ss_pred hhhcCCCCCEEEcccccceeecCCCCCCC------CCCCEEeCCCCcccc--cCccchhhhccCCeeEeee
Q 035895 278 TIQGLKSLQFLSLGHNRLQGSIPNSFDDL------VSLESLDLSNNNLSE--IIPLSLEKLLYLNILLIVV 340 (527)
Q Consensus 278 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~~~~ 340 (527)
.+..+++|++|++++|++++..+..|... +.|+.|++++|++.. +.|..+..+..++.++++.
T Consensus 258 ~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~ 328 (330)
T 1xku_A 258 GLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGN 328 (330)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC--
T ss_pred hhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecc
Confidence 78888888888888888887766666543 677888888888764 5667777777777776553
No 36
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.98 E-value=2.9e-31 Score=266.56 Aligned_cols=280 Identities=23% Similarity=0.346 Sum_probs=241.4
Q ss_pred hhhhcchhccc-CCCceeecCchhhhcCCCCCEEEccccccccccc----cccceEEcccccccCCCCCCcccccCCCCC
Q 035895 17 GDVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS----SIVDELSLSDNYLTSSTPELSFLSSMSNCK 91 (527)
Q Consensus 17 ~~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~----~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~ 91 (527)
-..|..+..++ ++|+++++.+ |.++++|++|++++|.+..... ..++.|+|++|.++..++ +..++
T Consensus 62 ~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~~~~~~l~~L~~L~l~~n~i~~~~~-------~~~l~ 132 (347)
T 4fmz_A 62 IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISP-------LANLT 132 (347)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEECTTSCCCCCGG-------GTTCT
T ss_pred hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCchHHcCCCcCCEEECcCCcccCchh-------hccCC
Confidence 34577899999 8999998876 9999999999999998865311 258999999999987532 67899
Q ss_pred CCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEec
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSF 171 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 171 (527)
+|++|++++|.....++ .+..+. +|++|++++|.+....+ +..+++|++|++++|.+.+..+ +..+++|+.|++
T Consensus 133 ~L~~L~l~~n~~~~~~~-~~~~l~-~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 206 (347)
T 4fmz_A 133 KMYSLNLGANHNLSDLS-PLSNMT-GLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTA 206 (347)
T ss_dssp TCCEEECTTCTTCCCCG-GGTTCT-TCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEEC
T ss_pred ceeEEECCCCCCccccc-chhhCC-CCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccccc--ccCCCccceeec
Confidence 99999999996655444 366654 79999999999986554 8899999999999999986544 889999999999
Q ss_pred cCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccC
Q 035895 172 RGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPL 251 (527)
Q Consensus 172 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~ 251 (527)
++|.+.+..+ +..+++|+.|++++|++++..+ +..+++|++|++++|.++.++ .+..+++|+.|++++|.+.+.
T Consensus 207 ~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~l~~n~l~~~- 280 (347)
T 4fmz_A 207 YVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDIN-AVKDLTKLKMLNVGSNQISDI- 280 (347)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCC-
T ss_pred ccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCCh-hHhcCCCcCEEEccCCccCCC-
Confidence 9999986544 8899999999999999997554 899999999999999999985 578899999999999998875
Q ss_pred CccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCccc
Q 035895 252 PSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLS 320 (527)
Q Consensus 252 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 320 (527)
+.+..+++|++|++++|.+.+..|..|.++++|++|++++|++++..| +..+++|+.|++++|+++
T Consensus 281 -~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 281 -SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp -GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred -hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 568899999999999999999999999999999999999999997766 889999999999999986
No 37
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.98 E-value=2.7e-31 Score=271.27 Aligned_cols=266 Identities=17% Similarity=0.163 Sum_probs=216.4
Q ss_pred cceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCc
Q 035895 64 VDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLI 143 (527)
Q Consensus 64 l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 143 (527)
++.|++++|.++.+++. .|..+++|++|++++|.+++..+..+..+. +|++|+|++|.+++..|..|..+++|+
T Consensus 47 l~~l~l~~~~l~~l~~~-----~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~ 120 (390)
T 3o6n_A 47 QKIVTFKNSTMRKLPAA-----LLDSFRQVELLNLNDLQIEEIDTYAFAYAH-TIQKLYMGFNAIRYLPPHVFQNVPLLT 120 (390)
T ss_dssp CSEEEEESCEESEECTH-----HHHHCCCCSEEECTTSCCCEECTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred ceEEEecCCchhhCChh-----HhcccccCcEEECCCCcccccChhhccCCC-CcCEEECCCCCCCcCCHHHhcCCCCCC
Confidence 34455555555544432 256788999999999999998777888775 799999999999999999999999999
Q ss_pred EEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCce-------
Q 035895 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRN------- 216 (527)
Q Consensus 144 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~------- 216 (527)
+|++++|+++...+..|..+++|++|++++|.+++..|..|..+++|+.|++++|++++.. ++.+++|+.
T Consensus 121 ~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~ 197 (390)
T 3o6n_A 121 VLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNL 197 (390)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSC
T ss_pred EEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeeccccc
Confidence 9999999999777777899999999999999999888889999999999999999998754 334445555
Q ss_pred ------------eeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCC
Q 035895 217 ------------LHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKS 284 (527)
Q Consensus 217 ------------L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 284 (527)
|++++|.++.+|... .++|+.|++++|.+.+. ..+..+++|++|++++|.+.+..|..|..+++
T Consensus 198 l~~~~~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 273 (390)
T 3o6n_A 198 LSTLAIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQR 273 (390)
T ss_dssp CSEEECCSSCSEEECCSSCCCEEECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSS
T ss_pred ccccCCCCcceEEECCCCeeeeccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHcccccc
Confidence 455555554444322 35788888888888764 57888999999999999998888889999999
Q ss_pred CCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeee
Q 035895 285 LQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 285 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
|++|++++|++++ +|..+..+++|+.|++++|++++ +|..+..++.|+.|+++.+.+.
T Consensus 274 L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~ 331 (390)
T 3o6n_A 274 LERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIV 331 (390)
T ss_dssp CCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCC
T ss_pred CCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCccc
Confidence 9999999999985 56677888999999999999985 5666888899999988876653
No 38
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.98 E-value=2.7e-31 Score=286.15 Aligned_cols=284 Identities=20% Similarity=0.205 Sum_probs=251.6
Q ss_pred hcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhc
Q 035895 41 FNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNF 114 (527)
Q Consensus 41 ~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 114 (527)
..+++++.+++++|.+....+. .++.|+|++|.|+.+++. .|..+++|++|+|++|.+++..|..|..+
T Consensus 48 l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 122 (597)
T 3oja_B 48 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTY-----AFAYAHTIQKLYMGFNAIRYLPPHVFQNV 122 (597)
T ss_dssp GGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTT-----TTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred ccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChH-----HhcCCCCCCEEECCCCcCCCCCHHHHcCC
Confidence 4578999999999988765442 488999999999986653 57899999999999999999888888877
Q ss_pred cccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeee
Q 035895 115 SQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLD 194 (527)
Q Consensus 115 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 194 (527)
. +|++|+|++|.+++.++..|..+++|++|+|++|.+++..|..|+.+++|+.|++++|.+++.. +..+++|+.|+
T Consensus 123 ~-~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~ 198 (597)
T 3oja_B 123 P-LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHAN 198 (597)
T ss_dssp T-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEE
T ss_pred C-CCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhh
Confidence 5 7999999999999888888899999999999999999999989999999999999999998652 56788999999
Q ss_pred eecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCC
Q 035895 195 LRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGD 274 (527)
Q Consensus 195 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 274 (527)
+++|.+++ +...++|+.|++++|.++.+|..+. ++|+.|++++|.+.+ +..+..+++|++|+|++|.+.+.
T Consensus 199 l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~~--~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~ 269 (597)
T 3oja_B 199 VSYNLLST-----LAIPIAVEELDASHNSINVVRGPVN--VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKI 269 (597)
T ss_dssp CCSSCCSE-----EECCTTCSEEECCSSCCCEEECSCC--SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEE
T ss_pred cccCcccc-----ccCCchhheeeccCCcccccccccC--CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCC
Confidence 99999875 3445689999999999999876543 689999999999987 47899999999999999999999
Q ss_pred ChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeee
Q 035895 275 IPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 275 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
+|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.+++ +|..+..++.|+.|+++.+.+.
T Consensus 270 ~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~ 337 (597)
T 3oja_B 270 MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIV 337 (597)
T ss_dssp ESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCC
T ss_pred CHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCC
Confidence 99999999999999999999996 57778889999999999999985 6777899999999999987764
No 39
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=5e-31 Score=263.07 Aligned_cols=266 Identities=19% Similarity=0.188 Sum_probs=236.2
Q ss_pred ccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCC
Q 035895 63 IVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDL 142 (527)
Q Consensus 63 ~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 142 (527)
.++.++++++.++.++..+ .+.|++|++++|++++..+..+..+. +|++|++++|.+++..|..|..+++|
T Consensus 32 ~l~~l~~~~~~l~~lp~~~--------~~~l~~L~L~~n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L 102 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKDL--------PPDTALLDLQNNKITEIKDGDFKNLK-NLHTLILINNKISKISPGAFAPLVKL 102 (330)
T ss_dssp ETTEEECTTSCCCSCCCSC--------CTTCCEEECCSSCCCCBCTTTTTTCT-TCCEEECCSSCCCCBCTTTTTTCTTC
T ss_pred CCeEEEecCCCccccCccC--------CCCCeEEECCCCcCCEeChhhhccCC-CCCEEECCCCcCCeeCHHHhcCCCCC
Confidence 4788999999999876543 26899999999999998777887775 79999999999999889999999999
Q ss_pred cEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCC--CCCccccCCccCceeeCC
Q 035895 143 ISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSG--SIPTCFGNLTALRNLHLD 220 (527)
Q Consensus 143 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~ 220 (527)
++|++++|+++.. |..+. ++|+.|++++|.+++..+..|..+++|+.|++++|.+.. ..+..|.++++|++|+++
T Consensus 103 ~~L~Ls~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~ 179 (330)
T 1xku_A 103 ERLYLSKNQLKEL-PEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179 (330)
T ss_dssp CEEECCSSCCSBC-CSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECC
T ss_pred CEEECCCCcCCcc-Chhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECC
Confidence 9999999999854 44433 799999999999998888889999999999999999964 778899999999999999
Q ss_pred CCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecC
Q 035895 221 SNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300 (527)
Q Consensus 221 ~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 300 (527)
+|.++.+|..+. ++|+.|++++|.+.+..|..+..+++|++|++++|.+.+..+..|..+++|++|++++|+++ .+|
T Consensus 180 ~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp 256 (330)
T 1xku_A 180 DTNITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVP 256 (330)
T ss_dssp SSCCCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCC
T ss_pred CCccccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCC
Confidence 999999997664 78999999999999998999999999999999999999888889999999999999999998 788
Q ss_pred CCCCCCCCCCEEeCCCCcccccCccchhhh------ccCCeeEeeeeee
Q 035895 301 NSFDDLVSLESLDLSNNNLSEIIPLSLEKL------LYLNILLIVVVIL 343 (527)
Q Consensus 301 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l------~~L~~L~~~~~~~ 343 (527)
..+..+++|+.|++++|+++++.+..|... ..+..++++.+.+
T Consensus 257 ~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~ 305 (330)
T 1xku_A 257 GGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 305 (330)
T ss_dssp TTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSS
T ss_pred hhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcc
Confidence 899999999999999999999888777543 5566676666554
No 40
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.98 E-value=1.1e-30 Score=273.25 Aligned_cols=305 Identities=24% Similarity=0.338 Sum_probs=180.1
Q ss_pred cccccchhhhcchhccc-CCCceeecCchhhhcCCCCCEEEccccccccccc----cccceEEcccccccCCCCCCcccc
Q 035895 11 LDGGMTGDVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS----SIVDELSLSDNYLTSSTPELSFLS 85 (527)
Q Consensus 11 ~~~~~~~~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~----~~l~~L~Ls~N~l~~~~~~~~~~~ 85 (527)
+.+.+.......+..++ +++.+..++ .+..+++|++|+|++|.+.+..+ ..++.|++++|.++..++
T Consensus 36 ~~~~i~~~~l~~l~~L~l~~~~i~~l~--~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~------ 107 (466)
T 1o6v_A 36 VTDTVSQTDLDQVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP------ 107 (466)
T ss_dssp TTSEECHHHHHTCCEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG------
T ss_pred cccccChhHhccccEEecCCCCCccCc--chhhhcCCCEEECCCCccCCchhhhccccCCEEECCCCccccChh------
Confidence 34445545566778888 778887764 37889999999999999876543 358899999999987532
Q ss_pred cCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCC
Q 035895 86 SMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQK 165 (527)
Q Consensus 86 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 165 (527)
+.++++|++|++++|++++..+ +..+ ++|++|++++|.+++.. .+..+++|++|+++ |.+.+.. .+..+++
T Consensus 108 -~~~l~~L~~L~L~~n~l~~~~~--~~~l-~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~ 178 (466)
T 1o6v_A 108 -LANLTNLTGLTLFNNQITDIDP--LKNL-TNLNRLELSSNTISDIS--ALSGLTSLQQLSFG-NQVTDLK--PLANLTT 178 (466)
T ss_dssp -GTTCTTCCEEECCSSCCCCCGG--GTTC-TTCSEEEEEEEEECCCG--GGTTCTTCSEEEEE-ESCCCCG--GGTTCTT
T ss_pred -hcCCCCCCEEECCCCCCCCChH--HcCC-CCCCEEECCCCccCCCh--hhccCCcccEeecC-CcccCch--hhccCCC
Confidence 6789999999999999998643 6665 47999999999988642 35555555555554 2332221 1444555
Q ss_pred CCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCC--------------------ccccCCccCceeeCCCCCCC
Q 035895 166 LQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIP--------------------TCFGNLTALRNLHLDSNELT 225 (527)
Q Consensus 166 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p--------------------~~~~~l~~L~~L~L~~N~l~ 225 (527)
|+.|++++|.+++. ..+..+++|+.|++++|.+++..| +.+..+++|+.|++++|.++
T Consensus 179 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~ 256 (466)
T 1o6v_A 179 LERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQIS 256 (466)
T ss_dssp CCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCC
T ss_pred CCEEECcCCcCCCC--hhhccCCCCCEEEecCCcccccccccccCCCCEEECCCCCcccchhhhcCCCCCEEECCCCccc
Confidence 55555555554422 224444445555555544443332 23444455555555555555
Q ss_pred CCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCC
Q 035895 226 SIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDD 305 (527)
Q Consensus 226 ~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 305 (527)
+++. +..+++|+.|++++|.+.+..+ +..+++|++|++++|++.+..| +..+++|+.|++++|++++..| +..
T Consensus 257 ~~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~ 329 (466)
T 1o6v_A 257 NLAP-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSS 329 (466)
T ss_dssp CCGG-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGG
T ss_pred cchh-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hcc
Confidence 4443 4444555555555555444322 4455555555555555544322 4555555555555555554433 445
Q ss_pred CCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeee
Q 035895 306 LVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 306 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~ 343 (527)
+++|+.|++++|.+++. ..+..++.|+.|+++.+.+
T Consensus 330 l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l 365 (466)
T 1o6v_A 330 LTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQI 365 (466)
T ss_dssp CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCC
T ss_pred CccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCcc
Confidence 55555555555555543 2445555555555554444
No 41
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=5.3e-31 Score=263.12 Aligned_cols=265 Identities=20% Similarity=0.211 Sum_probs=235.8
Q ss_pred ccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCC
Q 035895 63 IVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDL 142 (527)
Q Consensus 63 ~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 142 (527)
.++.++++++.++.++..+ .++|++|++++|.+++..|..+..+. +|++|++++|.+++..|..|..+++|
T Consensus 34 ~l~~l~~~~~~l~~ip~~~--------~~~l~~L~l~~n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L 104 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEI--------SPDTTLLDLQNNDISELRKDDFKGLQ-HLYALVLVNNKISKIHEKAFSPLRKL 104 (332)
T ss_dssp ETTEEECCSSCCSSCCSCC--------CTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECGGGSTTCTTC
T ss_pred cCCEEECCCCCccccCCCC--------CCCCeEEECCCCcCCccCHhHhhCCC-CCcEEECCCCccCccCHhHhhCcCCC
Confidence 4789999999999876643 26899999999999998888888875 79999999999999999999999999
Q ss_pred cEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCC--CCCCccccCCccCceeeCC
Q 035895 143 ISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLS--GSIPTCFGNLTALRNLHLD 220 (527)
Q Consensus 143 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~L~ 220 (527)
++|++++|+++.. |..+. ++|+.|++++|++++..+..|..+++|+.|++++|.++ +..|..|..+ +|+.|+++
T Consensus 105 ~~L~L~~n~l~~l-~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~ 180 (332)
T 2ft3_A 105 QKLYISKNHLVEI-PPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 180 (332)
T ss_dssp CEEECCSSCCCSC-CSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCC
T ss_pred CEEECCCCcCCcc-Ccccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECc
Confidence 9999999999854 44433 89999999999999877788999999999999999996 4778889988 99999999
Q ss_pred CCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecC
Q 035895 221 SNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300 (527)
Q Consensus 221 ~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 300 (527)
+|+++.+|..+. ++|+.|++++|.+.+..+..+..+++|++|++++|.+.+..|..|..+++|++|++++|+++ .+|
T Consensus 181 ~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp 257 (332)
T 2ft3_A 181 EAKLTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVP 257 (332)
T ss_dssp SSBCSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCC
T ss_pred CCCCCccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecC
Confidence 999999998665 78999999999999988899999999999999999999988889999999999999999998 788
Q ss_pred CCCCCCCCCCEEeCCCCcccccCccchhhh------ccCCeeEeeeeee
Q 035895 301 NSFDDLVSLESLDLSNNNLSEIIPLSLEKL------LYLNILLIVVVIL 343 (527)
Q Consensus 301 ~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l------~~L~~L~~~~~~~ 343 (527)
..+..+++|+.|++++|+++++.+..+... ..++.++++.+.+
T Consensus 258 ~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~ 306 (332)
T 2ft3_A 258 AGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPV 306 (332)
T ss_dssp TTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSS
T ss_pred hhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcc
Confidence 889999999999999999999888777654 4566777666554
No 42
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.97 E-value=1.2e-30 Score=271.39 Aligned_cols=298 Identities=19% Similarity=0.195 Sum_probs=236.9
Q ss_pred cchhhhcchhccc-CCCceeecCchhhhcCCCCCEEEccccccccccc---cccceEEcccccccCCCCCCcccccCCCC
Q 035895 15 MTGDVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS---SIVDELSLSDNYLTSSTPELSFLSSMSNC 90 (527)
Q Consensus 15 ~~~~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~---~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l 90 (527)
.....+.++..+| ++|.++++ | .|..+++|++|++++|.+.+..- ..++.|+|++|.+++++ +.++
T Consensus 36 ~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~~~~~l~~L~~L~Ls~N~l~~~~--------~~~l 105 (457)
T 3bz5_A 36 ISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTLDLSQNTNLTYLACDSNKLTNLD--------VTPL 105 (457)
T ss_dssp EEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCCCCTTCTTCSEEECCSSCCSCCC--------CTTC
T ss_pred cChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeEccccCCCCCEEECcCCCCceee--------cCCC
Confidence 3444577888888 88999987 3 68999999999999998876421 24789999999998741 5788
Q ss_pred CCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEe
Q 035895 91 KYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLS 170 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 170 (527)
++|++|++++|+++++ | +..+ ++|++|++++|.+++. + +..+++|++|++++|+..+.. .+..+++|+.|+
T Consensus 106 ~~L~~L~L~~N~l~~l-~--~~~l-~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ 176 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTKL-D--VSQN-PLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLD 176 (457)
T ss_dssp TTCCEEECCSSCCSCC-C--CTTC-TTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEE
T ss_pred CcCCEEECCCCcCCee-c--CCCC-CcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEE
Confidence 9999999999999874 4 5555 4799999999999875 2 778899999999999655444 478899999999
Q ss_pred ccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCccccc
Q 035895 171 FRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGP 250 (527)
Q Consensus 171 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~ 250 (527)
+++|++++ +| +..+++|+.|++++|++++. .++.+++|++|++++|+++++| +..+++|+.|++++|.+.+.
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCC
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCc
Confidence 99999986 45 78889999999999999875 3888999999999999999988 77889999999999999887
Q ss_pred CCccccCCC-------CCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCC--------CCCCCCCCCEEeCC
Q 035895 251 LPSKIGNLK-------VLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPN--------SFDDLVSLESLDLS 315 (527)
Q Consensus 251 ~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--------~~~~l~~L~~L~ls 315 (527)
.+..+..++ +|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. .+.++++|+.|+++
T Consensus 249 ~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~ 326 (457)
T 3bz5_A 249 DVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLN 326 (457)
T ss_dssp CCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECT
T ss_pred CHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECC
Confidence 655555554 45666667776666665 46778889999998887666654 25566788889999
Q ss_pred CCcccccCccchhhhccCCeeEeeeeeee
Q 035895 316 NNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 316 ~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
+|+++++ .+..++.|+.|+++.+.+.
T Consensus 327 ~N~l~~l---~l~~l~~L~~L~l~~N~l~ 352 (457)
T 3bz5_A 327 NTELTEL---DVSHNTKLKSLSCVNAHIQ 352 (457)
T ss_dssp TCCCSCC---CCTTCTTCSEEECCSSCCC
T ss_pred CCccccc---ccccCCcCcEEECCCCCCC
Confidence 9998885 3778888888888776654
No 43
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=1.8e-31 Score=268.82 Aligned_cols=255 Identities=19% Similarity=0.229 Sum_probs=214.4
Q ss_pred cceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCc
Q 035895 64 VDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLI 143 (527)
Q Consensus 64 l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 143 (527)
+++|+|++|.++.+++. .|.++++|++|++++|++++..|..+..+. +|++|++++|.+++..+..+..+++|+
T Consensus 54 L~~L~l~~n~i~~~~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 127 (353)
T 2z80_A 54 VKSLDLSNNRITYISNS-----DLQRCVNLQALVLTSNGINTIEEDSFSSLG-SLEHLDLSYNYLSNLSSSWFKPLSSLT 127 (353)
T ss_dssp CCEEECTTSCCCEECTT-----TTTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEECCSSCCSSCCHHHHTTCTTCS
T ss_pred CcEEECCCCcCcccCHH-----HhccCCCCCEEECCCCccCccCHhhcCCCC-CCCEEECCCCcCCcCCHhHhCCCccCC
Confidence 44555555555544332 477889999999999999998888888775 799999999999987777799999999
Q ss_pred EEEeecCcccccCc-ccccCCCCCCEEeccCc-ccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCC
Q 035895 144 SIDLGGNKLNGSIS-ITLGKLQKLQFLSFRGN-ELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDS 221 (527)
Q Consensus 144 ~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 221 (527)
+|++++|++++..+ ..+..+++|+.|++++| .+....+..|..+++|+.|++++|++++..|..|..+++|++|++++
T Consensus 128 ~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~ 207 (353)
T 2z80_A 128 FLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHM 207 (353)
T ss_dssp EEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEEC
T ss_pred EEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCC
Confidence 99999999996655 57899999999999999 57766778899999999999999999998899999999999999999
Q ss_pred CCCCCCchhhh-CCCCccEEEccCCcccccCCcccc---CCCCCCEEEccCCCCCC----CChhhhhcCCCCCEEEcccc
Q 035895 222 NELTSIPSILW-NLKDILYLDFWSNLFVGPLPSKIG---NLKVLTRIDFSRNNLLG----DIPTTIQGLKSLQFLSLGHN 293 (527)
Q Consensus 222 N~l~~lp~~~~-~l~~L~~l~l~~n~~~~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N 293 (527)
|+++.+|..+. .+++|+.|++++|.+.+..+..+. ....++.++++++.+.+ .+|..+..+++|++|++++|
T Consensus 208 n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N 287 (353)
T 2z80_A 208 KQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRN 287 (353)
T ss_dssp SCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSS
T ss_pred CccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCC
Confidence 99999887654 588999999999999876655443 46678899999998876 46888999999999999999
Q ss_pred cceeecCCCCCCCCCCCEEeCCCCcccccCc
Q 035895 294 RLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 324 (527)
Q Consensus 294 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 324 (527)
+++...+..|..+++|+.|++++|++.+..|
T Consensus 288 ~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 288 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 9995444457999999999999999987654
No 44
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.97 E-value=2.4e-30 Score=269.52 Aligned_cols=248 Identities=22% Similarity=0.223 Sum_probs=204.2
Q ss_pred cceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCc
Q 035895 64 VDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLI 143 (527)
Q Consensus 64 l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 143 (527)
...++.+++.++.++..++ ++|++|+|++|++++..|..|..+. +|+.|+|++|.+++..+..|..+++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~--------~~l~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~ 126 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP--------SNTRYLNLMENNIQMIQADTFRHLH-HLEVLQLGRNSIRQIEVGAFNGLASLN 126 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC--------TTCSEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCC
T ss_pred CcEEEECCCCcCccCCCCC--------CCccEEECcCCcCceECHHHcCCCC-CCCEEECCCCccCCcChhhccCcccCC
Confidence 3467777777777665432 5788899999998888788887765 799999999988888888888899999
Q ss_pred EEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeec-ccCCCCCCccccCCccCceeeCCCC
Q 035895 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRG-NKLSGSIPTCFGNLTALRNLHLDSN 222 (527)
Q Consensus 144 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N 222 (527)
+|+|++|++++..+..|..+++|+.|++++|.++...+..|..+++|+.|++++ |.+....+..|.++++|++|++++|
T Consensus 127 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n 206 (452)
T 3zyi_A 127 TLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMC 206 (452)
T ss_dssp EEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCC
Confidence 999999998887777788889999999999988877777888889999999988 5565555567888899999999999
Q ss_pred CCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCC
Q 035895 223 ELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNS 302 (527)
Q Consensus 223 ~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 302 (527)
+++.+|. +..+++|+.|++++|.+.+..|..|..+++|++|++++|++.+..|..|.++++|+.|+|++|++++..+..
T Consensus 207 ~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 285 (452)
T 3zyi_A 207 NIKDMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDL 285 (452)
T ss_dssp CCSSCCC-CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTS
T ss_pred ccccccc-ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHH
Confidence 9888864 667788888888888888888888888888888888888888878888888888888888888888777777
Q ss_pred CCCCCCCCEEeCCCCcccc
Q 035895 303 FDDLVSLESLDLSNNNLSE 321 (527)
Q Consensus 303 ~~~l~~L~~L~ls~N~l~~ 321 (527)
|..+++|+.|+|++|++.-
T Consensus 286 ~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 286 FTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp STTCTTCCEEECCSSCEEC
T ss_pred hccccCCCEEEccCCCcCC
Confidence 8888888888888887753
No 45
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.97 E-value=2.7e-30 Score=268.09 Aligned_cols=247 Identities=23% Similarity=0.237 Sum_probs=202.9
Q ss_pred cceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCc
Q 035895 64 VDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLI 143 (527)
Q Consensus 64 l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 143 (527)
...++.+++.++.++..++ ++++.|+|++|++++..+..|..+. +|+.|+|++|.++.+.+..|.++++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~--------~~l~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~n~i~~i~~~~~~~l~~L~ 115 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGIS--------TNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNGLANLN 115 (440)
T ss_dssp SCEEECCSCCCSSCCSCCC--------TTCSEEECCSCCCCEECTTTTSSCS-SCCEEECCSSCCCEECGGGGTTCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCC--------CCCcEEEccCCcCCeeCHHHhhCCC-CCCEEECCCCcCCccChhhccCCccCC
Confidence 3466777777777665432 5788889999988887777777764 788999999988888888888899999
Q ss_pred EEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeec-ccCCCCCCccccCCccCceeeCCCC
Q 035895 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRG-NKLSGSIPTCFGNLTALRNLHLDSN 222 (527)
Q Consensus 144 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N 222 (527)
+|+|++|++++..+..|..+++|+.|++++|.++...+..|..+++|+.|++++ |.+....+..|.++++|++|++++|
T Consensus 116 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n 195 (440)
T 3zyj_A 116 TLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMC 195 (440)
T ss_dssp EEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTS
T ss_pred EEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCC
Confidence 999999998877777888889999999999988877777888889999999988 4555555567888999999999999
Q ss_pred CCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCC
Q 035895 223 ELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNS 302 (527)
Q Consensus 223 ~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 302 (527)
+++.+|. +..+++|+.|++++|.+.+..|..|..+++|++|++++|++.+..|..|.++++|++|+|++|++++..+..
T Consensus 196 ~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 274 (440)
T 3zyj_A 196 NLREIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDL 274 (440)
T ss_dssp CCSSCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTT
T ss_pred cCccccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhH
Confidence 9988874 667788888888888888887888888888888888888888877888888888888888888888777777
Q ss_pred CCCCCCCCEEeCCCCccc
Q 035895 303 FDDLVSLESLDLSNNNLS 320 (527)
Q Consensus 303 ~~~l~~L~~L~ls~N~l~ 320 (527)
|..+++|+.|+|++|++.
T Consensus 275 ~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 275 FTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TSSCTTCCEEECCSSCEE
T ss_pred hccccCCCEEEcCCCCcc
Confidence 888888888888888875
No 46
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.97 E-value=6.3e-30 Score=277.25 Aligned_cols=332 Identities=23% Similarity=0.236 Sum_probs=261.0
Q ss_pred cCCCccccccchhhhcchhccc-CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCC
Q 035895 6 LNNRQLDGGMTGDVCYRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSST 78 (527)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~ 78 (527)
|+.+.+..+.+. .+.+++.+| ++|+|+++++.+|.+|++|++|+|++|.+.+..+. .++.|+|++|+|++++
T Consensus 62 N~i~~l~~~~f~-~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~ 140 (635)
T 4g8a_A 62 NPLRHLGSYSFF-SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 140 (635)
T ss_dssp SCCCEECTTTTT-TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCST
T ss_pred CCCCCCCHHHHh-CCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCC
Confidence 333444443332 367899999 99999999999999999999999999998765543 4789999999999876
Q ss_pred CCCcccccCCCCCCCCEEEcccCCCCcc-cChhHhhccccccEEEcccCccccccchhhcCCc-----------------
Q 035895 79 PELSFLSSMSNCKYLKKLDISRNPLDGF-LPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLT----------------- 140 (527)
Q Consensus 79 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~----------------- 140 (527)
+. .|+++++|++|++++|++++. .|..+..+. .|+.|++++|.+++..+..+..+.
T Consensus 141 ~~-----~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~ 214 (635)
T 4g8a_A 141 NF-----PIGHLKTLKELNVAHNLIQSFKLPEYFSNLT-NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN 214 (635)
T ss_dssp TC-----CCTTCTTCCEEECCSSCCCCCCCCGGGGGCT-TCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC
T ss_pred hh-----hhhcCcccCeeccccCccccCCCchhhccch-hhhhhcccCccccccccccccchhhhhhhhhhhhcccCccc
Confidence 53 478899999999999999764 466666664 799999999988766554443222
Q ss_pred --------------------------------------------------------------------------------
Q 035895 141 -------------------------------------------------------------------------------- 140 (527)
Q Consensus 141 -------------------------------------------------------------------------------- 140 (527)
T Consensus 215 ~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~ 294 (635)
T 4g8a_A 215 FIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYY 294 (635)
T ss_dssp EECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSC
T ss_pred ccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhccc
Confidence
Q ss_pred ----------------------------------CCcEEEeecCcccccCc-------------------ccccCCCCCC
Q 035895 141 ----------------------------------DLISIDLGGNKLNGSIS-------------------ITLGKLQKLQ 167 (527)
Q Consensus 141 ----------------------------------~L~~L~L~~N~l~~~~~-------------------~~~~~l~~L~ 167 (527)
.|+.|++.+|.+....+ .....+++|+
T Consensus 295 ~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~ 374 (635)
T 4g8a_A 295 LDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLE 374 (635)
T ss_dssp EEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCC
T ss_pred ccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccc
Confidence 12233333333221111 1122456778
Q ss_pred EEeccCcccccc-------------------------cChhhhcCcccCeeeeecccCCCCCC-ccccCCccCceeeCCC
Q 035895 168 FLSFRGNELEGS-------------------------IPNVLCHLAVLFQLDLRGNKLSGSIP-TCFGNLTALRNLHLDS 221 (527)
Q Consensus 168 ~L~l~~N~l~~~-------------------------~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~ 221 (527)
.|+++.|.+... .+..+..+++|+.++++.|......+ ..|..+++++.++++.
T Consensus 375 ~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~ 454 (635)
T 4g8a_A 375 FLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISH 454 (635)
T ss_dssp EEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTT
T ss_pred cchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhhhccccccccccccccccccccccccc
Confidence 888888776421 23346677889999999888766544 5689999999999999
Q ss_pred CCCCCC-chhhhCCCCccEEEccCCccc-ccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeec
Q 035895 222 NELTSI-PSILWNLKDILYLDFWSNLFV-GPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSI 299 (527)
Q Consensus 222 N~l~~l-p~~~~~l~~L~~l~l~~n~~~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 299 (527)
|.+..+ |..+..++.++.|++++|... +..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|+|++..
T Consensus 455 n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~ 534 (635)
T 4g8a_A 455 THTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLD 534 (635)
T ss_dssp SCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCC
T ss_pred cccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCC
Confidence 999986 456677899999999999854 567889999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCCCCCEEeCCCCcccccCccchhhh-ccCCeeEeeeeeee
Q 035895 300 PNSFDDLVSLESLDLSNNNLSEIIPLSLEKL-LYLNILLIVVVILA 344 (527)
Q Consensus 300 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l-~~L~~L~~~~~~~~ 344 (527)
|..|..+++|++|||++|++++++|..+..+ .+|+.|+++.+.+.
T Consensus 535 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 535 TFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred hhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 9999999999999999999999999999988 68999999887764
No 47
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.97 E-value=1.3e-31 Score=261.89 Aligned_cols=141 Identities=28% Similarity=0.464 Sum_probs=114.1
Q ss_pred hhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec------------------------------cCccceeEEEE
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS------------------------------CSNEDFRALVL 431 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~------------------------------~~~~~~~~lv~ 431 (527)
...++|++.+.||+|+||+||+|+++. .||||+++.. +..++..++||
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVm 110 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVT 110 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEE
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEE
Confidence 345678889999999999999999764 6999987421 11235578999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
|||+||+|.+++...+..+++.++..|+.|||.||+||| +++||||||||+|||+++++.+||+|||+|+.......
T Consensus 111 Ey~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred EcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 999999999999877777999999999999999999999 89999999999999999999999999999997654333
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
....+..+||+.||||
T Consensus 188 ~~~~~~~~GT~~ymAP 203 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAP 203 (307)
T ss_dssp ------CCCCTTSCCH
T ss_pred ceeecccccCCCccCH
Confidence 2233456799999998
No 48
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.97 E-value=1.4e-31 Score=260.95 Aligned_cols=140 Identities=32% Similarity=0.520 Sum_probs=120.1
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee--------------------------------ccCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF--------------------------------SCSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~--------------------------------~~~~~~~~~lv 430 (527)
.++|++.+.||+|+||+||+|+. .+|+.||||++.. ...+++..++|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999999985 5799999999852 12345677899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
||||+||+|.+++.+.+ .++..++..|+.||+.||+||| +++||||||||+|||+++++.+||+|||+|+.+....
T Consensus 111 mEy~~gG~L~~~i~~~~-~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIG-SFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred EecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 99999999999997653 5788899999999999999999 9999999999999999999999999999999875443
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
........+||+.||||
T Consensus 187 ~~~~~~~~~GTp~YmAP 203 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSP 203 (311)
T ss_dssp TCCCBCCCCSCGGGCCH
T ss_pred CcccccCcccCcccCCH
Confidence 33333456899999998
No 49
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=2.1e-30 Score=258.13 Aligned_cols=225 Identities=20% Similarity=0.278 Sum_probs=140.5
Q ss_pred CCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEe
Q 035895 91 KYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLS 170 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 170 (527)
+.++.|+|++|.++. +|..+..+. +|++|+|++|.++ .+|..+..+++|++|+|++|+++ .+|..++.+++|++|+
T Consensus 81 ~~l~~L~L~~n~l~~-lp~~l~~l~-~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 81 PGRVALELRSVPLPQ-FPDQAFRLS-HLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp TTCCEEEEESSCCSS-CCSCGGGGT-TCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred cceeEEEccCCCchh-cChhhhhCC-CCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 456666666666663 344444443 5666666666666 55556666666666666666666 4455566666666666
Q ss_pred ccCcccccccChhhhc---------CcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEE
Q 035895 171 FRGNELEGSIPNVLCH---------LAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLD 241 (527)
Q Consensus 171 l~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~ 241 (527)
+++|++.+.+|..+.. +++|++|++++|+++ .+|..++.+++|++|++++|+++++|..+..+++|++|+
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELD 235 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEE
Confidence 6666555555554433 666666666666666 455666666666666666666666666666666666666
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCccc
Q 035895 242 FWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLS 320 (527)
Q Consensus 242 l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 320 (527)
+++|.+.+.+|..++.+++|++|++++|++.+.+|..+..+++|++|++++|++.+.+|..+..+++|+.+++..|.+.
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 6666666666666666666666666666666666666666666666666666666666666666666666666655443
No 50
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=4.5e-30 Score=253.32 Aligned_cols=248 Identities=23% Similarity=0.286 Sum_probs=190.5
Q ss_pred eEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccc--cchhhcCCcCCc
Q 035895 66 ELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGG--ISEEIGNLTDLI 143 (527)
Q Consensus 66 ~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~--~~~~~~~l~~L~ 143 (527)
.++.+++.++.++..+ .++|++|++++|+++.+.+..+..+. +|++|+|++|.++.. .+..+..+++|+
T Consensus 11 ~l~c~~~~l~~ip~~~--------~~~l~~L~L~~n~l~~i~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~~~~~L~ 81 (306)
T 2z66_A 11 EIRCNSKGLTSVPTGI--------PSSATRLELESNKLQSLPHGVFDKLT-QLTKLSLSSNGLSFKGCCSQSDFGTTSLK 81 (306)
T ss_dssp EEECCSSCCSSCCSCC--------CTTCCEEECCSSCCCCCCTTTTTTCT-TCSEEECCSSCCCEEEEEEHHHHSCSCCC
T ss_pred EEEcCCCCcccCCCCC--------CCCCCEEECCCCccCccCHhHhhccc-cCCEEECCCCccCcccCcccccccccccC
Confidence 4555666666554432 14677777777777754444455543 677777777777633 256666777788
Q ss_pred EEEeecCcccccCcccccCCCCCCEEeccCcccccccC-hhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCC
Q 035895 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIP-NVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSN 222 (527)
Q Consensus 144 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 222 (527)
+|++++|.+++ ++..+..+++|+.|++++|.+++..+ ..+..+++|++|++++|.+.+..|..|..+++|++|++++|
T Consensus 82 ~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 82 YLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp EEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTC
T ss_pred EEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCC
Confidence 88888887774 44557778888888888888775544 56777888888888888887777777888888888888888
Q ss_pred CCCC--CchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecC
Q 035895 223 ELTS--IPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIP 300 (527)
Q Consensus 223 ~l~~--lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 300 (527)
.+++ +|..+..+++|++|++++|.+.+..|..+..+++|++|++++|.+++..+..|..+++|++|++++|++++..|
T Consensus 161 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 161 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK 240 (306)
T ss_dssp EEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSS
T ss_pred ccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCH
Confidence 8775 67777778888888888888887778889999999999999999998878889999999999999999999999
Q ss_pred CCCCCCC-CCCEEeCCCCcccccC
Q 035895 301 NSFDDLV-SLESLDLSNNNLSEII 323 (527)
Q Consensus 301 ~~~~~l~-~L~~L~ls~N~l~~~~ 323 (527)
..+..++ +|+.|++++|+++...
T Consensus 241 ~~~~~~~~~L~~L~L~~N~~~~~c 264 (306)
T 2z66_A 241 QELQHFPSSLAFLNLTQNDFACTC 264 (306)
T ss_dssp SSCCCCCTTCCEEECTTCCEECSG
T ss_pred HHHHhhhccCCEEEccCCCeeccc
Confidence 9999985 9999999999998653
No 51
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=6.6e-30 Score=254.51 Aligned_cols=223 Identities=20% Similarity=0.277 Sum_probs=209.0
Q ss_pred ccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeee
Q 035895 116 QSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195 (527)
Q Consensus 116 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 195 (527)
..++.|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..++.+++|++|++++|.++ .+|..|..+++|++|++
T Consensus 81 ~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L 157 (328)
T 4fcg_A 81 PGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSI 157 (328)
T ss_dssp TTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEE
T ss_pred cceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEEC
Confidence 47999999999998 66777888999999999999999 77888999999999999999999 78999999999999999
Q ss_pred ecccCCCCCCccccC---------CccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEc
Q 035895 196 RGNKLSGSIPTCFGN---------LTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDF 266 (527)
Q Consensus 196 ~~N~l~~~~p~~~~~---------l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~L 266 (527)
++|.+.+.+|..+.. +++|++|++++|+++.+|..+..+++|++|++++|.+.+ +|..++.+++|++|++
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDL 236 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEEC
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEEC
Confidence 999999899987765 999999999999999999999999999999999999985 6778999999999999
Q ss_pred cCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeee
Q 035895 267 SRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVI 342 (527)
Q Consensus 267 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~ 342 (527)
++|++.+.+|..|.++++|++|++++|++.+.+|..|..+++|+.|++++|++.+.+|..+..++.++.+.+....
T Consensus 237 s~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 237 RGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp TTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred cCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999988766443
No 52
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.97 E-value=3.3e-31 Score=258.82 Aligned_cols=140 Identities=28% Similarity=0.460 Sum_probs=115.5
Q ss_pred CCccccceeccCCceEEEEEEcc------CCcEEEEEEEee-----------------------------ccCccceeEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKVFHF-----------------------------SCSNEDFRAL 429 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~-----------------------------~~~~~~~~~l 429 (527)
++|.+.+.||+|+||+||+|++. +++.||||+++. .|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46888899999999999999863 478899999742 2445667899
Q ss_pred EEEeccCCcHHHHHHhcC------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 035895 430 VLEYTTNGSLEKVLYSSN------------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHL 497 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl 497 (527)
|||||++|+|.++++..+ ..++|.++..|+.|||+||+||| +++||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997642 35899999999999999999999 899999999999999999999999
Q ss_pred eecccccccCCCCCccceeccccccccccC
Q 035895 498 SDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 498 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+|||+|+...............||++||||
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAP 199 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPP 199 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCH
T ss_pred CCcccceecCCCCceeecCceecChhhcCH
Confidence 999999976543322222335689999998
No 53
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.97 E-value=6e-31 Score=258.07 Aligned_cols=140 Identities=24% Similarity=0.410 Sum_probs=116.6
Q ss_pred CCccccceeccCCceEEEEEEcc------CCcEEEEEEEee------------------------------ccCccceeE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKVFHF------------------------------SCSNEDFRA 428 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~------------------------------~~~~~~~~~ 428 (527)
+++++.+.||+|+||+||+|++. +++.||||+++. .|..++..+
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~ 105 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLS 105 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEE
Confidence 44677899999999999999862 568899999742 234456678
Q ss_pred EEEEeccCCcHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC
Q 035895 429 LVLEYTTNGSLEKVLYSSN---------------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI 493 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~ 493 (527)
+|||||++|+|.++|.... ..++|.++..|+.|||+||+||| +++||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCC
Confidence 9999999999999996432 35889999999999999999999 99999999999999999999
Q ss_pred cEEEeecccccccCCCCCccceeccccccccccC
Q 035895 494 VAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 494 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.+||+|||+|+.+.........+...||++||||
T Consensus 183 ~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAP 216 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAP 216 (308)
T ss_dssp CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCH
T ss_pred CEEECCcccceeccCCCceeEecccccCCcccCH
Confidence 9999999999977544333333456789999998
No 54
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.97 E-value=9e-31 Score=259.26 Aligned_cols=140 Identities=27% Similarity=0.438 Sum_probs=109.2
Q ss_pred CCccccceeccCCceEEEEEEcc------CCcEEEEEEEee-----------------------------ccCccceeEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKVFHF-----------------------------SCSNEDFRAL 429 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~-----------------------------~~~~~~~~~l 429 (527)
++|.+.+.||+|+||+||+|+++ +++.||||+++. .|.+++..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45778899999999999999864 578999999742 2455667899
Q ss_pred EEEeccCCcHHHHHHhcC--------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcE
Q 035895 430 VLEYTTNGSLEKVLYSSN--------------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVA 495 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~ 495 (527)
|||||++|+|.++++..+ ..++|.+++.|+.|||.||+||| +++||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997542 34889999999999999999999 8999999999999999999999
Q ss_pred EEeecccccccCCCCCccceeccccccccccC
Q 035895 496 HLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 496 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
||+|||+|+.+.........+...||+.||||
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAP 229 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPP 229 (329)
T ss_dssp EECCCC----------------CCCCGGGCCH
T ss_pred EEcccccceeccCCCcceecCcccccccccCh
Confidence 99999999977544333334456789999998
No 55
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.97 E-value=6.9e-31 Score=260.40 Aligned_cols=140 Identities=26% Similarity=0.442 Sum_probs=112.7
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccceeEEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNEDFRALV 430 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~~~~lv 430 (527)
..+.|++.+.||+|+||+||+|+. .+|+.||||++... +.+++..++|
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 457899999999999999999986 57999999998531 2344577899
Q ss_pred EEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 431 LEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+||+|.+++...+ ..+++.+...|+.||+.||+||| +++||||||||+|||+++++.+||+|||+|+.+...
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 178 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHH
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCC
Confidence 99999999999997544 45688888999999999999999 999999999999999999999999999999976432
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
. ...+..+||+.||||
T Consensus 179 ~--~~~~~~~GT~~YmAP 194 (350)
T 4b9d_A 179 V--ELARACIGTPYYLSP 194 (350)
T ss_dssp H--HHHHHHHSCCTTCCH
T ss_pred c--ccccccCCCccccCH
Confidence 1 122345799999998
No 56
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.97 E-value=1.8e-30 Score=256.29 Aligned_cols=141 Identities=28% Similarity=0.392 Sum_probs=115.6
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee------------------------ccCccceeEEEEEeccCC
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF------------------------SCSNEDFRALVLEYTTNG 437 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~------------------------~~~~~~~~~lv~ey~~~g 437 (527)
..+.|+..++||+|+||+||+|+. .+|+.||||+++. .+.+++..++|||||+||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 135 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGG 135 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHhHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCC
Confidence 345688889999999999999986 5799999999853 123456778999999999
Q ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC-cEEEeecccccccCCCCCc---c
Q 035895 438 SLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI-VAHLSDFGIAKLLTGEDQS---M 513 (527)
Q Consensus 438 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~-~~kl~Dfg~a~~~~~~~~~---~ 513 (527)
+|.+++...+ .+++.++..|+.||+.||+||| +++||||||||+|||++.++ ++||+|||+|+.+...... .
T Consensus 136 ~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~ 211 (336)
T 4g3f_A 136 SLGQLIKQMG-CLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLL 211 (336)
T ss_dssp BHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccccee
Confidence 9999997654 5899999999999999999999 99999999999999999887 6999999999987543211 1
Q ss_pred ceeccccccccccC
Q 035895 514 TQTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~~~~~~~t~~y~aP 527 (527)
.....+||+.||||
T Consensus 212 ~~~~~~GT~~YmAP 225 (336)
T 4g3f_A 212 TGDYIPGTETHMAP 225 (336)
T ss_dssp --CCCCCCGGGCCH
T ss_pred cCCccccCccccCH
Confidence 22235799999998
No 57
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.97 E-value=2e-30 Score=256.71 Aligned_cols=136 Identities=26% Similarity=0.339 Sum_probs=117.2
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-----------------------------cCccceeEEEEEec
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-----------------------------~~~~~~~~lv~ey~ 434 (527)
+.|+..+.||+|+||+||+|+. .+|+.||||++... +..++..++|||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 4599999999999999999986 57999999998531 23456778999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 514 (527)
+||+|.+++.+. .+++.++..|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+..... .
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--C
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--c
Confidence 999999999753 5789999999999999999999 99999999999999999999999999999998754322 2
Q ss_pred eeccccccccccC
Q 035895 515 QTQTLAIIGYMAP 527 (527)
Q Consensus 515 ~~~~~~t~~y~aP 527 (527)
.+..+||++||||
T Consensus 227 ~~~~~GTp~YmAP 239 (346)
T 4fih_A 227 RKSLVGTPYWMAP 239 (346)
T ss_dssp BCCCCSCGGGCCH
T ss_pred ccccccCcCcCCH
Confidence 2346899999998
No 58
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=7.5e-29 Score=257.64 Aligned_cols=255 Identities=29% Similarity=0.392 Sum_probs=161.1
Q ss_pred cchhccc-CCCceeecCchhhhcCCCCCEEEcccccccc--ccccccceEEcccccccCCCCCCcccccCCCCCCCCEEE
Q 035895 21 YRICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLG--RLSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLD 97 (527)
Q Consensus 21 ~~~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~--~~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~ 97 (527)
..+..++ ++|+++++++ .+++|+.|++++|.+.+ ..+..++.|++++|.+++++ .+.++++|++|+
T Consensus 91 ~~L~~L~l~~n~l~~lp~----~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~lp-------~~~~l~~L~~L~ 159 (454)
T 1jl5_A 91 PHLESLVASCNSLTELPE----LPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLP-------ELQNSSFLKIID 159 (454)
T ss_dssp TTCSEEECCSSCCSSCCC----CCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSSCC-------CCTTCTTCCEEE
T ss_pred CCCCEEEccCCcCCcccc----ccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCCCc-------ccCCCCCCCEEE
Confidence 3555666 6666666432 23667777777777654 23345777777777776533 367788888888
Q ss_pred cccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccc
Q 035895 98 ISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELE 177 (527)
Q Consensus 98 Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 177 (527)
+++|++++ +|..+ .+|++|++++|.+++ +| .+..+++|++|++++|++++. |.. .++|+.|++++|.++
T Consensus 160 l~~N~l~~-lp~~~----~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~---~~~L~~L~l~~n~l~ 228 (454)
T 1jl5_A 160 VDNNSLKK-LPDLP----PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDL---PLSLESIVAGNNILE 228 (454)
T ss_dssp CCSSCCSC-CCCCC----TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCC---CTTCCEEECCSSCCS
T ss_pred CCCCcCcc-cCCCc----ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCC---cCcccEEECcCCcCC
Confidence 88888876 44432 368888888888876 44 578888888888888888753 322 257888888888887
Q ss_pred cccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccc--cCCccc
Q 035895 178 GSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVG--PLPSKI 255 (527)
Q Consensus 178 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~--~~p~~~ 255 (527)
.+|. +..+++|+.|++++|++++ +|.. +++|+.|++++|+++++|.. .++|+.|++++|.+.+ .+|
T Consensus 229 -~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~~~---~~~L~~L~ls~N~l~~l~~~~--- 296 (454)
T 1jl5_A 229 -ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLPEL---PQSLTFLDVSENIFSGLSELP--- 296 (454)
T ss_dssp -SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSEESCCC---
T ss_pred -cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccccCcc---cCcCCEEECcCCccCcccCcC---
Confidence 5563 7788888888888888875 3432 36788888888888877753 3567777777777665 222
Q ss_pred cCCCCCCEEEccCCCCCCCChhhhhcC-CCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccc
Q 035895 256 GNLKVLTRIDFSRNNLLGDIPTTIQGL-KSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSE 321 (527)
Q Consensus 256 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 321 (527)
++|++|++++|++.+ ++ .+ ++|++|++++|++++ +|.. +++|+.|++++|++++
T Consensus 297 ---~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~ 351 (454)
T 1jl5_A 297 ---PNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAE 351 (454)
T ss_dssp ---TTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC
T ss_pred ---CcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCcccc
Confidence 334444444444432 11 11 244555555555543 3322 2444555555555543
No 59
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.96 E-value=4.8e-29 Score=259.29 Aligned_cols=285 Identities=20% Similarity=0.183 Sum_probs=236.7
Q ss_pred CceeecCchhhhcCCCCCEEEccccccccccc----cccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCc
Q 035895 30 NKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS----SIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDG 105 (527)
Q Consensus 30 N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~----~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 105 (527)
....+..+..+.++++|++|++++|.+.+... ..++.|+|++|.+++++ +..+++|++|++++|++++
T Consensus 28 ~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~--------~~~l~~L~~L~Ls~N~l~~ 99 (457)
T 3bz5_A 28 FEMQATDTISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTLD--------LSQNTNLTYLACDSNKLTN 99 (457)
T ss_dssp TTCCTTSEEEHHHHTTCCEEECCSSCCCCCTTGGGCTTCSEEECCSSCCSCCC--------CTTCTTCSEEECCSSCCSC
T ss_pred cCcCcccccChhHcCCCCEEEccCCCcccChhhcccCCCCEEEccCCcCCeEc--------cccCCCCCEEECcCCCCce
Confidence 34566677789999999999999999876421 24889999999998752 5788999999999999998
Q ss_pred ccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhh
Q 035895 106 FLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLC 185 (527)
Q Consensus 106 ~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 185 (527)
. | +..+. +|++|++++|.+++. | +..+++|++|++++|++++. .++.+++|+.|++++|...+.+ .+.
T Consensus 100 ~-~--~~~l~-~L~~L~L~~N~l~~l-~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~ 167 (457)
T 3bz5_A 100 L-D--VTPLT-KLTYLNCDTNKLTKL-D--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVT 167 (457)
T ss_dssp C-C--CTTCT-TCCEEECCSSCCSCC-C--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCT
T ss_pred e-e--cCCCC-cCCEEECCCCcCCee-c--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccc
Confidence 5 3 56654 799999999999975 3 88999999999999999974 3889999999999999655555 478
Q ss_pred cCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEE
Q 035895 186 HLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRID 265 (527)
Q Consensus 186 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~ 265 (527)
.+++|+.|++++|++++. | ++.+++|+.|++++|++++++ +..+++|+.|++++|++.+ +| ++.+++|++|+
T Consensus 168 ~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~~--l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~ 239 (457)
T 3bz5_A 168 PQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKLD--LNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFD 239 (457)
T ss_dssp TCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEE
T ss_pred cCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCeec--cccCCCCCEEECcCCcccc-cC--ccccCCCCEEE
Confidence 899999999999999974 4 889999999999999999985 7889999999999999998 56 88999999999
Q ss_pred ccCCCCCCCChhhhhcCC-------CCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccc--------hhhh
Q 035895 266 FSRNNLLGDIPTTIQGLK-------SLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLS--------LEKL 330 (527)
Q Consensus 266 Ls~N~l~~~~p~~~~~l~-------~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~--------~~~l 330 (527)
+++|++++..+..+..++ +|+.|++++|.+.+.+| +..+++|+.|++++|.+.+.+|.. +..+
T Consensus 240 l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~ 317 (457)
T 3bz5_A 240 CSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQN 317 (457)
T ss_dssp CCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTC
T ss_pred eeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhc
Confidence 999999987766666555 56777777887777776 578899999999999987777653 3444
Q ss_pred ccCCeeEeeeeeee
Q 035895 331 LYLNILLIVVVILA 344 (527)
Q Consensus 331 ~~L~~L~~~~~~~~ 344 (527)
+.|+.|+++.+.+.
T Consensus 318 ~~L~~L~L~~N~l~ 331 (457)
T 3bz5_A 318 PKLVYLYLNNTELT 331 (457)
T ss_dssp TTCCEEECTTCCCS
T ss_pred ccCCEEECCCCccc
Confidence 56666666655553
No 60
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.4e-29 Score=247.12 Aligned_cols=205 Identities=22% Similarity=0.259 Sum_probs=126.3
Q ss_pred CCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCc-ccccCcccccCCCCCCEE
Q 035895 91 KYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNK-LNGSISITLGKLQKLQFL 169 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L 169 (527)
++|++|++++|++++..+..+..+. +|++|++++|.+++..|..|..+++|++|++++|+ ++...+..+..+++|+.|
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACR-NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCC-CCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 4566677777766665555555543 56666666666666666666666666677776665 555556666666666666
Q ss_pred eccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchh-hhCCCCccEEEccCCccc
Q 035895 170 SFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSI-LWNLKDILYLDFWSNLFV 248 (527)
Q Consensus 170 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~l~l~~n~~~ 248 (527)
++++|.+++..|..|..+++|++|++++|++++..+..|+.+++|++|++++|+++.+|.. +..+++|+.|++++|.+.
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 6666666665566666666666666666666665555666666666666666666665542 444555555555555555
Q ss_pred ccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccce
Q 035895 249 GPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQ 296 (527)
Q Consensus 249 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 296 (527)
+..|..+..+++|++|++++|.+.+..+..|..+++|++|++++|++.
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCcc
Confidence 555555555555555555555555544445555555555555555554
No 61
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.96 E-value=4.5e-30 Score=252.24 Aligned_cols=140 Identities=26% Similarity=0.421 Sum_probs=111.7
Q ss_pred CCccccceeccCCceEEEEEEccCCcEEEEEEEeec----------------------------cCcc----ceeEEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS----------------------------CSNE----DFRALVLE 432 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~----------------------------~~~~----~~~~lv~e 432 (527)
++|.+.+.||+|+||+||+|++ +|+.||||++... |..+ ...++|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 3477889999999999999997 5899999997421 1111 24689999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG-----YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~-----~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
||++|+|.++++.. .++|.++.+++.|+++||+|+|.. +.++||||||||+|||+++++++||+|||+|+...
T Consensus 82 y~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 99999999999764 578999999999999999999932 23499999999999999999999999999999875
Q ss_pred CCCCc--cceeccccccccccC
Q 035895 508 GEDQS--MTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~--~~~~~~~~t~~y~aP 527 (527)
..... ......+||++||||
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAP 181 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAP 181 (303)
T ss_dssp TTTTEESCC-----CCGGGCCH
T ss_pred CCCCceeeecccccccccccCH
Confidence 43322 122245799999998
No 62
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=9.1e-29 Score=257.54 Aligned_cols=247 Identities=23% Similarity=0.254 Sum_probs=226.7
Q ss_pred CCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEec
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSF 171 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 171 (527)
....++.+++.++. +|..+ ..+++.|+|++|+|++..+..|..+++|++|+|++|++++..+..|.++++|+.|+|
T Consensus 55 ~~~~v~c~~~~l~~-iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLSE-VPQGI---PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCSS-CCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcCc-cCCCC---CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 46789999999986 45543 358999999999999999999999999999999999999999999999999999999
Q ss_pred cCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCC-CCCCCCch-hhhCCCCccEEEccCCcccc
Q 035895 172 RGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDS-NELTSIPS-ILWNLKDILYLDFWSNLFVG 249 (527)
Q Consensus 172 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~lp~-~~~~l~~L~~l~l~~n~~~~ 249 (527)
++|++++..+..|..+++|++|+|++|+++...+..|.++++|+.|++++ |.+..+|. .+..+++|++|++++|.+.+
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 99999987788899999999999999999988888999999999999999 66777775 57789999999999999986
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhh
Q 035895 250 PLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 329 (527)
Q Consensus 250 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 329 (527)
. | .+..+++|++|+|++|.+.+..|..|.++++|+.|++++|++++..|..|.++++|+.|+|++|+++++++..+..
T Consensus 211 ~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 288 (452)
T 3zyi_A 211 M-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTP 288 (452)
T ss_dssp C-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTT
T ss_pred c-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhcc
Confidence 4 4 5889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCeeEeeeeeee
Q 035895 330 LLYLNILLIVVVILA 344 (527)
Q Consensus 330 l~~L~~L~~~~~~~~ 344 (527)
++.|+.|+++.+.+.
T Consensus 289 l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 289 LRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred ccCCCEEEccCCCcC
Confidence 999999999987764
No 63
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.96 E-value=2.3e-30 Score=252.40 Aligned_cols=137 Identities=29% Similarity=0.426 Sum_probs=114.0
Q ss_pred CCccccceeccCCceEEEEEEc----cCCcEEEEEEEeec-------------------------------cCccceeEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARL----QDGMEFAIKVFHFS-------------------------------CSNEDFRAL 429 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~-------------------------------~~~~~~~~l 429 (527)
++|++.+.||+|+||+||+|+. .+++.||||+++.. +.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5699999999999999999985 25789999987421 223456789
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
|||||+||+|.+++.+.+ .+++.++..++.||+.||+||| +++||||||||+|||+++++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~~-~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 999999999999997654 5788899999999999999999 999999999999999999999999999999876433
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
.. .....+||+.||||
T Consensus 180 ~~--~~~~~~GT~~YmAP 195 (304)
T 3ubd_A 180 EK--KAYSFCGTVEYMAP 195 (304)
T ss_dssp -C--CCCSCCCCGGGCCH
T ss_pred Cc--cccccccCcccCCH
Confidence 22 22346799999998
No 64
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1e-29 Score=250.81 Aligned_cols=277 Identities=19% Similarity=0.223 Sum_probs=223.2
Q ss_pred EEEcccccccc---ccccccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcc--cChhHhhccccccEEE
Q 035895 48 VFDVDNNYVLG---RLSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGF--LPRVVGNFSQSLEFIW 122 (527)
Q Consensus 48 ~L~Ls~N~~~~---~~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~~~~~~~~L~~L~ 122 (527)
.++.+++.+.. .++..++.|+|++|.++.++.. .|.++++|++|++++|+++.. .+..+..+ ++|++|+
T Consensus 11 ~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~-----~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~-~~L~~L~ 84 (306)
T 2z66_A 11 EIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHG-----VFDKLTQLTKLSLSSNGLSFKGCCSQSDFGT-TSLKYLD 84 (306)
T ss_dssp EEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTT-----TTTTCTTCSEEECCSSCCCEEEEEEHHHHSC-SCCCEEE
T ss_pred EEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHh-----HhhccccCCEEECCCCccCcccCcccccccc-cccCEEE
Confidence 45555555432 2234577888888888766553 468899999999999999853 35666665 4799999
Q ss_pred cccCccccccchhhcCCcCCcEEEeecCcccccCc-ccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCC
Q 035895 123 MSDCNISGGISEEIGNLTDLISIDLGGNKLNGSIS-ITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLS 201 (527)
Q Consensus 123 Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 201 (527)
+++|.++. +|..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+.+..|..|..+++|++|++++|.++
T Consensus 85 Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 163 (306)
T 2z66_A 85 LSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQ 163 (306)
T ss_dssp CCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEG
T ss_pred CCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccc
Confidence 99999985 56668999999999999999987665 57899999999999999999888899999999999999999998
Q ss_pred C-CCCccccCCccCceeeCCCCCCCCC-chhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhh
Q 035895 202 G-SIPTCFGNLTALRNLHLDSNELTSI-PSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTI 279 (527)
Q Consensus 202 ~-~~p~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 279 (527)
+ ..|..|..+++|++|++++|+++++ |..+..+++|+.|++++|.+.+..+..+..+++|++|++++|++.+..|..+
T Consensus 164 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 164 ENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp GGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSC
T ss_pred cccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHH
Confidence 6 6788999999999999999999997 6678889999999999999998888889999999999999999999999999
Q ss_pred hcCC-CCCEEEcccccceeecCC--CCCCCCCCCEEeCCCCcccccCccchhhhc
Q 035895 280 QGLK-SLQFLSLGHNRLQGSIPN--SFDDLVSLESLDLSNNNLSEIIPLSLEKLL 331 (527)
Q Consensus 280 ~~l~-~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~ 331 (527)
..++ +|++|++++|.+++.-+. ...-+...+.+.+..+.+....|..+++..
T Consensus 244 ~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~~~~g~~ 298 (306)
T 2z66_A 244 QHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPSDKQGMP 298 (306)
T ss_dssp CCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESGGGTTCB
T ss_pred HhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCchhhCCce
Confidence 9984 999999999999753210 011122344445556666666666655443
No 65
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.96 E-value=7.8e-30 Score=258.71 Aligned_cols=136 Identities=27% Similarity=0.345 Sum_probs=117.2
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEee-----------------------------ccCccceeEEEEEec
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF-----------------------------SCSNEDFRALVLEYT 434 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~-----------------------------~~~~~~~~~lv~ey~ 434 (527)
+.|+..+.||+|+||+||+|+. .+|+.||||++.. .+..++..++|||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 4599999999999999999986 5799999999853 123456778999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 514 (527)
+||+|.+++... .+++.++..|+.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+..... .
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~--~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--R 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC--C
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc--c
Confidence 999999998653 4788899999999999999999 99999999999999999999999999999998754322 2
Q ss_pred eeccccccccccC
Q 035895 515 QTQTLAIIGYMAP 527 (527)
Q Consensus 515 ~~~~~~t~~y~aP 527 (527)
.+..+||++||||
T Consensus 304 ~~~~~GTp~YmAP 316 (423)
T 4fie_A 304 RKSLVGTPYWMAP 316 (423)
T ss_dssp BCCCEECTTTCCH
T ss_pred ccccccCcCcCCH
Confidence 2346899999998
No 66
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.9e-30 Score=257.23 Aligned_cols=271 Identities=18% Similarity=0.188 Sum_probs=230.2
Q ss_pred eEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEE
Q 035895 66 ELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISI 145 (527)
Q Consensus 66 ~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 145 (527)
..++++|.++.++..+ .++|++|++++|++++..+..+..+. +|+.|++++|.+++..+..|..+++|++|
T Consensus 35 ~c~~~~~~l~~iP~~~--------~~~L~~L~l~~n~i~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 35 ICKGSSGSLNSIPSGL--------TEAVKSLDLSNNRITYISNSDLQRCV-NLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp EEECCSTTCSSCCTTC--------CTTCCEEECTTSCCCEECTTTTTTCT-TCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred EeeCCCCCcccccccc--------cccCcEEECCCCcCcccCHHHhccCC-CCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 4788888888876643 25899999999999987776787775 79999999999999889999999999999
Q ss_pred EeecCcccccCcccccCCCCCCEEeccCcccccccC-hhhhcCcccCeeeeecc-cCCCCCCccccCCccCceeeCCCCC
Q 035895 146 DLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIP-NVLCHLAVLFQLDLRGN-KLSGSIPTCFGNLTALRNLHLDSNE 223 (527)
Q Consensus 146 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~ 223 (527)
++++|++++..+..++.+++|++|++++|++++..+ ..|..+++|++|++++| .+....|..|+++++|++|++++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999998777779999999999999999985444 47899999999999999 5777778899999999999999999
Q ss_pred CCCC-chhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhh---hcCCCCCEEEccccccee--
Q 035895 224 LTSI-PSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTI---QGLKSLQFLSLGHNRLQG-- 297 (527)
Q Consensus 224 l~~l-p~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~-- 297 (527)
++++ |..+..+++|++|++++|.+....+..+..+++|++|++++|.+++..+..+ .....++.++++++.+++
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~ 265 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDES 265 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHH
T ss_pred cCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcc
Confidence 9986 7788899999999999999865444445668999999999999987665544 346778889999988875
Q ss_pred --ecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeeec
Q 035895 298 --SIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILAL 345 (527)
Q Consensus 298 --~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~~ 345 (527)
.+|..+..+++|+.|++++|+++.+++..+..++.|+.|+++.+.+..
T Consensus 266 l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 266 LFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp HHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred hhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 367778899999999999999997666667999999999999887643
No 67
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.8e-28 Score=254.48 Aligned_cols=247 Identities=23% Similarity=0.260 Sum_probs=226.3
Q ss_pred CCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEec
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSF 171 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 171 (527)
..+.++.+++.++. +|..+ ..+++.|+|++|+++...+..|..+++|++|+|++|++++..+..|.++++|+.|+|
T Consensus 44 ~~~~v~c~~~~l~~-iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLRE-VPDGI---STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCSS-CCSCC---CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcCc-CCCCC---CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 46789999999986 45543 357999999999999999999999999999999999999988899999999999999
Q ss_pred cCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCC-CCCCCCch-hhhCCCCccEEEccCCcccc
Q 035895 172 RGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDS-NELTSIPS-ILWNLKDILYLDFWSNLFVG 249 (527)
Q Consensus 172 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~lp~-~~~~l~~L~~l~l~~n~~~~ 249 (527)
++|+++...+..|..+++|++|+|++|+++...+..|.++++|++|++++ |.+..+|. .+.++++|++|++++|.+..
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 199 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE 199 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc
Confidence 99999977777899999999999999999988888999999999999999 55666765 57889999999999999884
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhh
Q 035895 250 PLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEK 329 (527)
Q Consensus 250 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 329 (527)
+| .+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|+++++.+..+..
T Consensus 200 -~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 277 (440)
T 3zyj_A 200 -IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTP 277 (440)
T ss_dssp -CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSS
T ss_pred -cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcc
Confidence 44 4889999999999999999988999999999999999999999999999999999999999999999999999999
Q ss_pred hccCCeeEeeeeeee
Q 035895 330 LLYLNILLIVVVILA 344 (527)
Q Consensus 330 l~~L~~L~~~~~~~~ 344 (527)
+..|+.|+++.+.+.
T Consensus 278 l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 278 LHHLERIHLHHNPWN 292 (440)
T ss_dssp CTTCCEEECCSSCEE
T ss_pred ccCCCEEEcCCCCcc
Confidence 999999999887764
No 68
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.96 E-value=9.8e-30 Score=253.90 Aligned_cols=149 Identities=24% Similarity=0.385 Sum_probs=121.8
Q ss_pred cHHHHhhhcCCccccceeccCCceEEEEEEcc------CCcEEEEEEEee------------------------------
Q 035895 376 SYQELLRATDGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKVFHF------------------------------ 419 (527)
Q Consensus 376 ~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~------------------------------ 419 (527)
+.+.++...++|++.+.||+|+||+||+|++. +++.||||++..
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 33455556678999999999999999999853 246899998742
Q ss_pred -ccCc-cceeEEEEEeccCCcHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCC
Q 035895 420 -SCSN-EDFRALVLEYTTNGSLEKVLYSSN---------------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDL 482 (527)
Q Consensus 420 -~~~~-~~~~~lv~ey~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdl 482 (527)
.|.. .+..++|||||++|+|.++|+... ..+++.++..|+.|||+||+||| +++||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCcc
Confidence 2323 345789999999999999997532 34789999999999999999999 999999999
Q ss_pred CCCCeeeCCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 483 KPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 483 k~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
||+|||+++++.+||+|||+|+.+.........+...||+.||||
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAP 256 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 256 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCH
Confidence 999999999999999999999987544433334456789999998
No 69
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.96 E-value=1.7e-29 Score=242.94 Aligned_cols=136 Identities=27% Similarity=0.458 Sum_probs=103.8
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec--------------------------------cCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS--------------------------------CSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~--------------------------------~~~~~~~~lv 430 (527)
.++|++.+.||+|+||+||+|+. .+|+.||||+++.. ..+++..++|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 47899999999999999999986 57999999998521 2234567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||| +|+|.+++.+. ..++..++..++.||+.||+|+| +++||||||||+|||+++++.+||+|||+|+......
T Consensus 92 mEy~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred EeCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 9999 67999998765 46889999999999999999999 9999999999999999999999999999998765332
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
.....+||+.||||
T Consensus 167 ---~~~~~~GT~~Y~AP 180 (275)
T 3hyh_A 167 ---FLKTSCGSPNYAAP 180 (275)
T ss_dssp -----------CTTSCH
T ss_pred ---ccCCeeECcccCCh
Confidence 22346799999998
No 70
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.6e-28 Score=239.61 Aligned_cols=227 Identities=22% Similarity=0.208 Sum_probs=198.6
Q ss_pred CCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEecc
Q 035895 93 LKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFR 172 (527)
Q Consensus 93 L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 172 (527)
-++++.+++.++.+ |..+ .++|+.|++++|.+++..+..|..+++|++|++++|.+++..+..|..+++|+.|+++
T Consensus 13 ~~~~~c~~~~l~~i-p~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 88 (285)
T 1ozn_A 13 KVTTSCPQQGLQAV-PVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLS 88 (285)
T ss_dssp SCEEECCSSCCSSC-CTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CeEEEcCcCCcccC-CcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCC
Confidence 36788999988864 5433 4579999999999999888899999999999999999998888899999999999999
Q ss_pred Ccc-cccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchh-hhCCCCccEEEccCCccccc
Q 035895 173 GNE-LEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSI-LWNLKDILYLDFWSNLFVGP 250 (527)
Q Consensus 173 ~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~l~l~~n~~~~~ 250 (527)
+|. +....|..|..+++|++|++++|++++..|..|.++++|++|++++|+++.+|.. +..+++|+.|++++|.+.+.
T Consensus 89 ~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 168 (285)
T 1ozn_A 89 DNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV 168 (285)
T ss_dssp SCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc
Confidence 997 8877788999999999999999999998899999999999999999999998764 67788899999999988877
Q ss_pred CCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccC
Q 035895 251 LPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEII 323 (527)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 323 (527)
.+..+..+++|++|++++|.+.+..|..|..+++|++|++++|++++..+..|..+++|+.|++++|++....
T Consensus 169 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 241 (285)
T 1ozn_A 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDC 241 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred CHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCC
Confidence 7777888889999999999888888888888889999999999888766667888888999999999887543
No 71
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.96 E-value=4.4e-29 Score=242.12 Aligned_cols=133 Identities=27% Similarity=0.360 Sum_probs=110.4
Q ss_pred ccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------c----CccceeEEE
Q 035895 387 FSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------C----SNEDFRALV 430 (527)
Q Consensus 387 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~----~~~~~~~lv 430 (527)
|++.+.||+|+||+||+|+. .+++.||+|++... + ..++..++|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 36678899999999999986 56899999997421 0 113456899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeeC-CCCcEEEeecccccccC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP--IIHCDLKPHNKLLD-DNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~--iiHrdlk~~nill~-~~~~~kl~Dfg~a~~~~ 507 (527)
||||+||+|.+++.+. ..+++..+..|+.||+.||+||| +++ ||||||||+|||++ +++.+||+|||+|+...
T Consensus 108 mEy~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~ 183 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCC
Confidence 9999999999999764 46788899999999999999999 776 99999999999998 57999999999998653
Q ss_pred CCCCccceeccccccccccC
Q 035895 508 GEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~~~~~~~~t~~y~aP 527 (527)
.. .....+||+.||||
T Consensus 184 ~~----~~~~~~GTp~YmAP 199 (290)
T 3fpq_A 184 AS----FAKAVIGTPEFMAP 199 (290)
T ss_dssp TT----SBEESCSSCCCCCG
T ss_pred CC----ccCCcccCccccCH
Confidence 22 12346799999999
No 72
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.96 E-value=4.7e-28 Score=251.64 Aligned_cols=245 Identities=28% Similarity=0.331 Sum_probs=104.9
Q ss_pred hhccc-CCCceeecCchhhhcCCCCCEEEccccccccc--cccccceEEcccccccCCCCCCcccccCCCCCCCCEEEcc
Q 035895 23 ICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGR--LSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDIS 99 (527)
Q Consensus 23 ~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~--~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls 99 (527)
+..++ ++|+++++ | .|.++++|++|++++|.+.+. .+..++.|++++|.++.++ .+.++++|++|+++
T Consensus 133 L~~L~L~~n~l~~l-p-~~~~l~~L~~L~l~~N~l~~lp~~~~~L~~L~L~~n~l~~l~-------~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 133 LEYLGVSNNQLEKL-P-ELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELP-------ELQNLPFLTAIYAD 203 (454)
T ss_dssp CCEEECCSSCCSSC-C-CCTTCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCC-------CCTTCTTCCEEECC
T ss_pred CCEEECcCCCCCCC-c-ccCCCCCCCEEECCCCcCcccCCCcccccEEECcCCcCCcCc-------cccCCCCCCEEECC
Confidence 33344 44444442 2 244444445555544444331 1123444444444444321 13444445555555
Q ss_pred cCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccc
Q 035895 100 RNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGS 179 (527)
Q Consensus 100 ~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 179 (527)
+|++++ +|.. ..+|+.|++++|.++ .+| .+..+++|++|++++|++++. |. .+++|+.|++++|++++
T Consensus 204 ~N~l~~-l~~~----~~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l-~~---~~~~L~~L~l~~N~l~~- 271 (454)
T 1jl5_A 204 NNSLKK-LPDL----PLSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKTL-PD---LPPSLEALNVRDNYLTD- 271 (454)
T ss_dssp SSCCSS-CCCC----CTTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSSC-CS---CCTTCCEEECCSSCCSC-
T ss_pred CCcCCc-CCCC----cCcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCcc-cc---cccccCEEECCCCcccc-
Confidence 555443 2221 123455555555444 223 244455555555555554432 11 12445555555555443
Q ss_pred cChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCC
Q 035895 180 IPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLK 259 (527)
Q Consensus 180 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~ 259 (527)
+|.. +++|+.|++++|++++. |.. .++|+.|++++|++++++.. .++|+.|++++|++.+ +|.. ++
T Consensus 272 l~~~---~~~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~ 337 (454)
T 1jl5_A 272 LPEL---PQSLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRSLCDL---PPSLEELNVSNNKLIE-LPAL---PP 337 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSEECCC---CTTCCEEECCSSCCSC-CCCC---CT
T ss_pred cCcc---cCcCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCcccCC---cCcCCEEECCCCcccc-cccc---CC
Confidence 2221 23445555555554431 110 13444555555554443321 1244555555554443 3322 34
Q ss_pred CCCEEEccCCCCCCCChhhhhcCCCCCEEEccccccee--ecCCCCCCC
Q 035895 260 VLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQG--SIPNSFDDL 306 (527)
Q Consensus 260 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l 306 (527)
+|++|++++|++++ +|. .+++|++|++++|++++ .+|..+..+
T Consensus 338 ~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L 382 (454)
T 1jl5_A 338 RLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDL 382 (454)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE
T ss_pred cCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhh
Confidence 45555555555542 333 24455555555555544 344444444
No 73
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.96 E-value=2.5e-29 Score=245.86 Aligned_cols=140 Identities=24% Similarity=0.442 Sum_probs=104.6
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeecc------------------------------C-----------
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFSC------------------------------S----------- 422 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~------------------------------~----------- 422 (527)
++|++.+.||+|+||+||+|+. .+|+.||||+++... .
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4699999999999999999986 578999999985310 0
Q ss_pred -ccceeEEEEEeccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 035895 423 -NEDFRALVLEYTTNGSLEKVLYSSNY--ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSD 499 (527)
Q Consensus 423 -~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~D 499 (527)
.+...++|||||+||+|.+++..... ..++..+..|+.||++||+||| +++||||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 01135899999999999999976432 3456667889999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCc----------cceeccccccccccC
Q 035895 500 FGIAKLLTGEDQS----------MTQTQTLAIIGYMAP 527 (527)
Q Consensus 500 fg~a~~~~~~~~~----------~~~~~~~~t~~y~aP 527 (527)
||+|+.+...... ...+..+||+.||||
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAP 199 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSP 199 (299)
T ss_dssp CCCC--------------------------CCCTTSCH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCH
Confidence 9999987543211 112345799999998
No 74
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=1.8e-29 Score=250.29 Aligned_cols=254 Identities=19% Similarity=0.181 Sum_probs=207.2
Q ss_pred eEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEE
Q 035895 66 ELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISI 145 (527)
Q Consensus 66 ~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 145 (527)
..+++.+.+...... .+..+++|++|+|++|++++..|..+..+. +|++|+|++|.+++..+ +..+++|++|
T Consensus 14 i~~ls~~~l~~~~~~-----~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~--~~~l~~L~~L 85 (317)
T 3o53_A 14 IEKVTDSSLKQALAS-----LRQSAWNVKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTL 85 (317)
T ss_dssp EESCCTTTHHHHHHH-----HHTTGGGCSEEECTTSCCCCCCHHHHTTCT-TCCEEECTTSCCEEEEE--ETTCTTCCEE
T ss_pred EeeccccchhhhHHH-----HhccCCCCCEEECcCCccCcCCHHHhhCCC-cCCEEECCCCcCCcchh--hhhcCCCCEE
Confidence 345555555432211 235567899999999999987777887775 79999999999987665 8899999999
Q ss_pred EeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCC
Q 035895 146 DLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELT 225 (527)
Q Consensus 146 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 225 (527)
++++|++++.. ..++|+.|++++|++++..+. .+++|+.|++++|++++..|..|+.+++|++|++++|+++
T Consensus 86 ~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 157 (317)
T 3o53_A 86 DLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID 157 (317)
T ss_dssp ECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCC
T ss_pred ECcCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCC
Confidence 99999998644 348999999999999866554 3678999999999999888889999999999999999999
Q ss_pred CCc-hhh-hCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCC
Q 035895 226 SIP-SIL-WNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSF 303 (527)
Q Consensus 226 ~lp-~~~-~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 303 (527)
.++ ..+ ..+++|++|++++|.+.+.. ....+++|++|++++|++++. |..|..+++|++|++++|+++ .+|..+
T Consensus 158 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~ 233 (317)
T 3o53_A 158 TVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLV-LIEKAL 233 (317)
T ss_dssp EEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCC-EECTTC
T ss_pred cccHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECCCCcCCcc-hhhhcccCcccEEECcCCccc-chhhHh
Confidence 864 444 36889999999999988662 234589999999999999864 555999999999999999999 578889
Q ss_pred CCCCCCCEEeCCCCccc-ccCccchhhhccCCeeEee
Q 035895 304 DDLVSLESLDLSNNNLS-EIIPLSLEKLLYLNILLIV 339 (527)
Q Consensus 304 ~~l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~~~ 339 (527)
..+++|+.|++++|+++ +.+|..+..++.|+.+++.
T Consensus 234 ~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 234 RFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp CCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred hcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 99999999999999998 7778888888777766544
No 75
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=8.9e-30 Score=251.91 Aligned_cols=222 Identities=19% Similarity=0.234 Sum_probs=146.9
Q ss_pred CCEEEcccCCCC-cccChhHh-------hccccccEEEcccCccccccchhh--cCCcCCcEEEeecCcccccCcccccC
Q 035895 93 LKKLDISRNPLD-GFLPRVVG-------NFSQSLEFIWMSDCNISGGISEEI--GNLTDLISIDLGGNKLNGSISITLGK 162 (527)
Q Consensus 93 L~~L~Ls~N~l~-~~~~~~~~-------~~~~~L~~L~Ls~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~ 162 (527)
|+.|+|++|.++ ..+|..+. .+ ++|++|+|++|.+++..|..+ ..+++|++|+|++|++++. |..++.
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~ 142 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGI-SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE 142 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTT-SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCc-CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH
Confidence 555566666653 23343332 23 356666666666666556554 6666777777777777655 555555
Q ss_pred C-----CCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCC--CCccc--cCCccCceeeCCCCCCCCCch----
Q 035895 163 L-----QKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGS--IPTCF--GNLTALRNLHLDSNELTSIPS---- 229 (527)
Q Consensus 163 l-----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~lp~---- 229 (527)
+ ++|++|++++|++.+..|..|..+++|++|++++|++.+. .|..+ +.+++|++|++++|+++.+|.
T Consensus 143 l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 222 (312)
T 1wwl_A 143 LQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSA 222 (312)
T ss_dssp HHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHH
T ss_pred HHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHH
Confidence 5 6777777777777666666677777777777777776543 22223 677777777777777775442
Q ss_pred hhhCCCCccEEEccCCcccccCC-ccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCC
Q 035895 230 ILWNLKDILYLDFWSNLFVGPLP-SKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVS 308 (527)
Q Consensus 230 ~~~~l~~L~~l~l~~n~~~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 308 (527)
.+..+++|++|++++|.+.+..| ..+..+++|++|++++|+++ .+|..+. ++|++|++++|++++. |. +..+++
T Consensus 223 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~ 297 (312)
T 1wwl_A 223 LAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQ 297 (312)
T ss_dssp HHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCE
T ss_pred HHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCC
Confidence 22456777777777777776654 44556778888888888887 5666555 7788888888888755 55 778888
Q ss_pred CCEEeCCCCcccc
Q 035895 309 LESLDLSNNNLSE 321 (527)
Q Consensus 309 L~~L~ls~N~l~~ 321 (527)
|+.|++++|++++
T Consensus 298 L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 298 VGNLSLKGNPFLD 310 (312)
T ss_dssp EEEEECTTCTTTC
T ss_pred CCEEeccCCCCCC
Confidence 8888888888765
No 76
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.7e-29 Score=249.93 Aligned_cols=246 Identities=17% Similarity=0.143 Sum_probs=211.4
Q ss_pred CCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccc-cccchhhc-------CCcCCcEEEeecCcccccCcc
Q 035895 87 MSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNIS-GGISEEIG-------NLTDLISIDLGGNKLNGSISI 158 (527)
Q Consensus 87 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~-~~~~~~~~-------~l~~L~~L~L~~N~l~~~~~~ 158 (527)
+...++|+.|++++|.+ .+|..+.. .|+.|+|++|.++ ...|..+. .+++|++|+|++|++++..|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~---~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTD---IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHH---HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHH---HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 34567799999999999 57776654 3899999999995 45666665 799999999999999988888
Q ss_pred cc--cCCCCCCEEeccCcccccccChhhhcC-----cccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCC---Cc
Q 035895 159 TL--GKLQKLQFLSFRGNELEGSIPNVLCHL-----AVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTS---IP 228 (527)
Q Consensus 159 ~~--~~l~~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~---lp 228 (527)
.+ ..+++|+.|++++|++++. |..+..+ ++|++|++++|++++..|..|+.+++|++|++++|++.+ +|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 76 8999999999999999977 8888887 999999999999999998999999999999999999876 35
Q ss_pred hhh--hCCCCccEEEccCCcccc---cCCccccCCCCCCEEEccCCCCCCCCh-hhhhcCCCCCEEEcccccceeecCCC
Q 035895 229 SIL--WNLKDILYLDFWSNLFVG---PLPSKIGNLKVLTRIDFSRNNLLGDIP-TTIQGLKSLQFLSLGHNRLQGSIPNS 302 (527)
Q Consensus 229 ~~~--~~l~~L~~l~l~~n~~~~---~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~ 302 (527)
..+ ..+++|++|++++|.+.+ .....+..+++|++|++++|++.+..| ..+..+++|++|+|++|+++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 455 789999999999999873 222445688999999999999998775 56777899999999999998 67777
Q ss_pred CCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeee
Q 035895 303 FDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 303 ~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~ 343 (527)
+. ++|+.|++++|++++. |. +..++.|+.|+++.+.+
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l 308 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPF 308 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTT
T ss_pred cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCC
Confidence 76 8999999999999987 55 88999999998877654
No 77
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=4.3e-30 Score=268.14 Aligned_cols=326 Identities=17% Similarity=0.136 Sum_probs=258.1
Q ss_pred hhhcchhccc-CCCceeec----CchhhhcCCCCCEEEccccccccc--------ccc---ccceEEcccccccCCCCCC
Q 035895 18 DVCYRICTID-SQNKLVGI----VSITIFNLSTLKVFDVDNNYVLGR--------LSS---IVDELSLSDNYLTSSTPEL 81 (527)
Q Consensus 18 ~~~~~~~~~~-s~N~l~~~----~~~~~~~l~~L~~L~Ls~N~~~~~--------~~~---~l~~L~Ls~N~l~~~~~~~ 81 (527)
..|.++..++ ++|+++.. ++..+..+++|++|+|++|.+... ++. .++.|+|++|.++.... .
T Consensus 25 ~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~-~ 103 (461)
T 1z7x_W 25 PLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGC-G 103 (461)
T ss_dssp HHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGH-H
T ss_pred hhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHH-H
Confidence 4567888888 88888853 467788899999999999987431 121 58999999999875220 0
Q ss_pred cccccCCCCCCCCEEEcccCCCCcccChhHhhc----cccccEEEcccCcccccc----chhhcCCcCCcEEEeecCccc
Q 035895 82 SFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNF----SQSLEFIWMSDCNISGGI----SEEIGNLTDLISIDLGGNKLN 153 (527)
Q Consensus 82 ~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~----~~~L~~L~Ls~n~l~~~~----~~~~~~l~~L~~L~L~~N~l~ 153 (527)
.+...+..+++|++|++++|++++..+..+... ..+|+.|++++|.++... +..+..+++|++|++++|.++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 122457889999999999999986545444432 236999999999998643 666778899999999999998
Q ss_pred ccCccccc-----CCCCCCEEeccCcccccc----cChhhhcCcccCeeeeecccCCCCC-----CccccCCccCceeeC
Q 035895 154 GSISITLG-----KLQKLQFLSFRGNELEGS----IPNVLCHLAVLFQLDLRGNKLSGSI-----PTCFGNLTALRNLHL 219 (527)
Q Consensus 154 ~~~~~~~~-----~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L 219 (527)
...+..+. ..++|+.|++++|.++.. ++..+..+++|++|++++|.+.... +..+..+++|++|++
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L 263 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWI 263 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEEC
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEEC
Confidence 65444443 367999999999999864 5778889999999999999987532 333456899999999
Q ss_pred CCCCCCC-----CchhhhCCCCccEEEccCCcccccCCcccc-----CCCCCCEEEccCCCCCCC----ChhhhhcCCCC
Q 035895 220 DSNELTS-----IPSILWNLKDILYLDFWSNLFVGPLPSKIG-----NLKVLTRIDFSRNNLLGD----IPTTIQGLKSL 285 (527)
Q Consensus 220 ~~N~l~~-----lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L 285 (527)
++|.++. ++..+..+++|++|++++|.+....+..+. ..++|++|++++|.+++. +|..+..+++|
T Consensus 264 ~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L 343 (461)
T 1z7x_W 264 WECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFL 343 (461)
T ss_dssp TTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSC
T ss_pred cCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCc
Confidence 9999998 677888899999999999988754443333 236999999999999865 56778889999
Q ss_pred CEEEcccccceeecCCCCCC-----CCCCCEEeCCCCcccc----cCccchhhhccCCeeEeeeeeee
Q 035895 286 QFLSLGHNRLQGSIPNSFDD-----LVSLESLDLSNNNLSE----IIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 286 ~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
++|++++|++++..+..+.. .++|+.|++++|.+++ .+|..+..++.|+.|+++.+.+.
T Consensus 344 ~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 344 LELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred cEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 99999999998654443332 6799999999999986 67888999999999999987664
No 78
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.95 E-value=1.7e-28 Score=260.13 Aligned_cols=137 Identities=28% Similarity=0.464 Sum_probs=118.7
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee-----------------------------------ccCccce
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF-----------------------------------SCSNEDF 426 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~-----------------------------------~~~~~~~ 426 (527)
..++|++.++||+|+||+||+|+. .+|+.||||++.. ...+++.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 457899999999999999999986 5799999999842 1224567
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
.|+|||||+||+|.+++... ..++...+..|+.||+.||+||| +++||||||||+|||++.+|.+||+|||+|+.+
T Consensus 267 lylVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeec
Confidence 78999999999999999765 35788899999999999999999 999999999999999999999999999999987
Q ss_pred CCCCCccceeccccccccccC
Q 035895 507 TGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~~~~~~~~t~~y~aP 527 (527)
.... ....+||+.||||
T Consensus 343 ~~~~----~~t~~GTp~YmAP 359 (689)
T 3v5w_A 343 SKKK----PHASVGTHGYMAP 359 (689)
T ss_dssp SSCC----CCSCCSCGGGCCH
T ss_pred CCCC----CCCccCCcCccCH
Confidence 5432 2246799999998
No 79
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=5.6e-27 Score=251.19 Aligned_cols=267 Identities=23% Similarity=0.255 Sum_probs=212.7
Q ss_pred hhccc-CCCceeecCchhhhcCCCCCEEEcccccccccc--ccccceEEcccccccCCCCCCcccccCCCCCCCCEEEcc
Q 035895 23 ICTID-SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRL--SSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDIS 99 (527)
Q Consensus 23 ~~~~~-s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~--~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls 99 (527)
+..++ ++|.++.+++. +. ++|+.|+|++|.+.... ...++.|+|++|+|++++. .+++|++|+++
T Consensus 42 l~~L~ls~n~L~~lp~~-l~--~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~lp~---------~l~~L~~L~Ls 109 (622)
T 3g06_A 42 NAVLNVGESGLTTLPDC-LP--AHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPV---------LPPGLLELSIF 109 (622)
T ss_dssp CCEEECCSSCCSCCCSC-CC--TTCSEEEECSCCCSCCCCCCTTCCEEEECSCCCSCCCC---------CCTTCCEEEEC
T ss_pred CcEEEecCCCcCccChh-hC--CCCcEEEecCCCCCCCCCcCCCCCEEEcCCCcCCcCCC---------CCCCCCEEECc
Confidence 44566 77888866543 33 78999999999886432 2358899999999887543 45789999999
Q ss_pred cCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccc
Q 035895 100 RNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGS 179 (527)
Q Consensus 100 ~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 179 (527)
+|+++++ |. ...+|+.|++++|.++.+ |.. +++|++|++++|++++. |. .+++|+.|++++|.+++
T Consensus 110 ~N~l~~l-~~----~l~~L~~L~L~~N~l~~l-p~~---l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~- 175 (622)
T 3g06_A 110 SNPLTHL-PA----LPSGLCKLWIFGNQLTSL-PVL---PPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTS- 175 (622)
T ss_dssp SCCCCCC-CC----CCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-
T ss_pred CCcCCCC-CC----CCCCcCEEECCCCCCCcC-CCC---CCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCC-
Confidence 9999874 43 235799999999999864 432 48899999999999864 32 45789999999999985
Q ss_pred cChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCC
Q 035895 180 IPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLK 259 (527)
Q Consensus 180 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~ 259 (527)
+| ..+++|+.|++++|++++ +|.. +++|+.|++++|.++.+|.. +++|+.|++++|.+.+ +| ..++
T Consensus 176 l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~ 241 (622)
T 3g06_A 176 LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTS-LP---VLPS 241 (622)
T ss_dssp CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC-CC---CCCT
T ss_pred Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCcccccCCC---CCCCCEEEccCCccCc-CC---CCCC
Confidence 55 456889999999999986 4432 47899999999999998864 4789999999998886 55 4568
Q ss_pred CCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCC
Q 035895 260 VLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLN 334 (527)
Q Consensus 260 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~ 334 (527)
+|++|++++|+++. +|. .+++|+.|+|++|+++ .+|..|..+++|+.|+|++|++++..|..+..+....
T Consensus 242 ~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~~~~ 311 (622)
T 3g06_A 242 ELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREITSAP 311 (622)
T ss_dssp TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHHHST
T ss_pred cCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhccccc
Confidence 89999999999984 555 6788999999999998 6788899999999999999999999888888776543
No 80
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.2e-28 Score=242.47 Aligned_cols=245 Identities=19% Similarity=0.194 Sum_probs=121.8
Q ss_pred CCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccC
Q 035895 28 SQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRN 101 (527)
Q Consensus 28 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N 101 (527)
+.+.+...+...+..+++|++|+|++|.+.+..+. .++.|+|++|.+++.. .+..+++|++|++++|
T Consensus 18 s~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~-------~~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 18 TDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL-------DLESLSTLRTLDLNNN 90 (317)
T ss_dssp CTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE-------EETTCTTCCEEECCSS
T ss_pred cccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch-------hhhhcCCCCEEECcCC
Confidence 55666666667777788889999888877654432 2444444444444321 1344455555555555
Q ss_pred CCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccC
Q 035895 102 PLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIP 181 (527)
Q Consensus 102 ~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p 181 (527)
++++..+. ++|+.|++++|.+++..+.. +++|++|++++|++++..+..+..+++|+.|++++|.+++..+
T Consensus 91 ~l~~l~~~------~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 161 (317)
T 3o53_A 91 YVQELLVG------PSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNF 161 (317)
T ss_dssp EEEEEEEC------TTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEG
T ss_pred ccccccCC------CCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccH
Confidence 55543211 24555555555555443322 3445555555555554444455555555555555555554444
Q ss_pred hhhh-cCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCC
Q 035895 182 NVLC-HLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKV 260 (527)
Q Consensus 182 ~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~ 260 (527)
..+. .+++|++|++++|.+++..+ ...+++|++|++++|+++++|..+..+++|+.|++++|.+.+ +|..+..+++
T Consensus 162 ~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~ 238 (317)
T 3o53_A 162 AELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQN 238 (317)
T ss_dssp GGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTT
T ss_pred HHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccc-hhhHhhcCCC
Confidence 4332 44555555555555543311 122455555555555555544444444444444444444432 3333444444
Q ss_pred CCEEEccCCCCC-CCChhhhhcCCCCCEEEcc
Q 035895 261 LTRIDFSRNNLL-GDIPTTIQGLKSLQFLSLG 291 (527)
Q Consensus 261 L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~ 291 (527)
|+.|++++|.+. +.+|..+..+++|+.|+++
T Consensus 239 L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 239 LEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp CCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 444444444444 3334444444444444444
No 81
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=8.1e-28 Score=252.22 Aligned_cols=235 Identities=20% Similarity=0.193 Sum_probs=195.7
Q ss_pred CCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCE
Q 035895 89 NCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQF 168 (527)
Q Consensus 89 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 168 (527)
.+++|++|+|++|.+++..|..+..+. +|++|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|+.
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~ 103 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFT-KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIET 103 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCT-TCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCC-CCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCE
Confidence 455899999999999987777887765 79999999999987666 8889999999999999886543 388999
Q ss_pred EeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCC-chhhh-CCCCccEEEccCCc
Q 035895 169 LSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSI-PSILW-NLKDILYLDFWSNL 246 (527)
Q Consensus 169 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l-p~~~~-~l~~L~~l~l~~n~ 246 (527)
|++++|.+++..+. .+++|+.|++++|.+++..|..|+++++|+.|+|++|.++++ |..+. .++.|+.|++++|.
T Consensus 104 L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~ 180 (487)
T 3oja_A 104 LHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNF 180 (487)
T ss_dssp EECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSC
T ss_pred EECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCc
Confidence 99999999876554 457889999999999988888899999999999999999984 55555 68899999999999
Q ss_pred ccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCccc-ccCcc
Q 035895 247 FVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLS-EIIPL 325 (527)
Q Consensus 247 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~ 325 (527)
+.+..+ +..+++|++|+|++|.+++.+| .|..+++|+.|++++|++++ +|..+..+++|+.|++++|++. +.+|.
T Consensus 181 l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 181 IYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp CCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred cccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 887633 4468999999999999997555 59999999999999999995 7888999999999999999998 66677
Q ss_pred chhhhccCCeeEe
Q 035895 326 SLEKLLYLNILLI 338 (527)
Q Consensus 326 ~~~~l~~L~~L~~ 338 (527)
.+..++.+..+.+
T Consensus 257 ~~~~l~~L~~l~~ 269 (487)
T 3oja_A 257 FFSKNQRVQTVAK 269 (487)
T ss_dssp HHTTCHHHHHHHH
T ss_pred HHHhCCCCcEEec
Confidence 7777766665543
No 82
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.95 E-value=7.9e-27 Score=226.50 Aligned_cols=207 Identities=22% Similarity=0.213 Sum_probs=125.4
Q ss_pred cccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeee
Q 035895 117 SLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196 (527)
Q Consensus 117 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 196 (527)
+|++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|.+++..+..|..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34455555555544444445555555555555555554444455555555555555555554444555555555555555
Q ss_pred cccCCCCCCccccCCccCceeeCCCCCCCC--CchhhhCCCCccEEEccCCcccccCCccccCCCCCC----EEEccCCC
Q 035895 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTS--IPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLT----RIDFSRNN 270 (527)
Q Consensus 197 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~----~L~Ls~N~ 270 (527)
+|.+.+..+..|+.+++|++|++++|.++. +|..+..+++|++|++++|.+.+..+..+..++.|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 555555444455555555555555555554 345555555555555555555554445555555555 78888888
Q ss_pred CCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCc
Q 035895 271 LLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 324 (527)
Q Consensus 271 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 324 (527)
+.+..+..+.. .+|++|++++|++++..+..|..+++|+.|++++|+++...|
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 88655555544 478999999999887777778889999999999998876443
No 83
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.94 E-value=1.4e-27 Score=239.76 Aligned_cols=120 Identities=28% Similarity=0.393 Sum_probs=102.7
Q ss_pred hhhcCCccccceeccCCceEEEEEEcc----CCcEEEEEEEee----------------------------ccCccceeE
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHF----------------------------SCSNEDFRA 428 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~----------------------------~~~~~~~~~ 428 (527)
..-.+.|++.+.||+|+||+||+|+.+ +++.||||++.. ....++..+
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 344577999999999999999999753 578899998742 112345778
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC-CcEEEeecccccccC
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDN-IVAHLSDFGIAKLLT 507 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~-~~~kl~Dfg~a~~~~ 507 (527)
+|||||+||+|.+++. .++..++..++.|++.||+||| +++||||||||+|||++.+ +.+||+|||+|+...
T Consensus 97 lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 9999999999999984 3788889999999999999999 9999999999999999876 899999999998654
No 84
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.7e-27 Score=249.77 Aligned_cols=228 Identities=20% Similarity=0.215 Sum_probs=122.7
Q ss_pred CCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccc
Q 035895 45 TLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSL 118 (527)
Q Consensus 45 ~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L 118 (527)
+|+.|+|++|.+.+..|. .++.|+|++|.+++.. .+..+++|++|+|++|.++++.+. ++|
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-------~l~~l~~L~~L~Ls~N~l~~l~~~------~~L 101 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL-------DLESLSTLRTLDLNNNYVQELLVG------PSI 101 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEE-------ECTTCTTCCEEECCSSEEEEEEEC------TTC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCc-------ccccCCCCCEEEecCCcCCCCCCC------CCc
Confidence 677777777766543332 1333444444433211 134555566666666666543221 346
Q ss_pred cEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhh-cCcccCeeeeec
Q 035895 119 EFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLC-HLAVLFQLDLRG 197 (527)
Q Consensus 119 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~L~L~~ 197 (527)
+.|++++|.+++..+. .+++|++|+|++|.+++..|..++.+++|+.|++++|.+++..|..+. .+++|+.|+|++
T Consensus 102 ~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~ 178 (487)
T 3oja_A 102 ETLHAANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQY 178 (487)
T ss_dssp CEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTT
T ss_pred CEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCC
Confidence 6666666666554443 235566666666666655555555666666666666666655555554 456666666666
Q ss_pred ccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCC-CCCh
Q 035895 198 NKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLL-GDIP 276 (527)
Q Consensus 198 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p 276 (527)
|.|++..+ +..+++|+.|+|++|.++++|+.+..+++|+.|++++|.+.+ +|..+..+++|+.|++++|.+. +.+|
T Consensus 179 N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 179 NFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp SCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHH
T ss_pred Cccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchH
Confidence 66654422 223556666666666666655555555555555555555553 3444555555555555555554 3444
Q ss_pred hhhhcCCCCCEEEcc
Q 035895 277 TTIQGLKSLQFLSLG 291 (527)
Q Consensus 277 ~~~~~l~~L~~L~L~ 291 (527)
..+..++.|+.++++
T Consensus 256 ~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 256 DFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHTTCHHHHHHHHH
T ss_pred HHHHhCCCCcEEecc
Confidence 455555555555543
No 85
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.94 E-value=3.8e-27 Score=239.26 Aligned_cols=138 Identities=30% Similarity=0.422 Sum_probs=113.4
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------c------Cccce
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------C------SNEDF 426 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~------~~~~~ 426 (527)
+.|++.+.||+|+||+||+|+. .+|+.||||++... + .+.+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5699999999999999999986 57999999997421 0 12246
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
.++|||||+ |+|.+++... ..+++.++..|+.||+.||+||| +++||||||||+|||++.++.+|++|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 789999996 6899998654 46889999999999999999999 999999999999999999999999999999976
Q ss_pred CCCCC--ccceeccccccccccC
Q 035895 507 TGEDQ--SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~--~~~~~~~~~t~~y~aP 527 (527)
..... ....+..+||++||||
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~AP 231 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAP 231 (398)
T ss_dssp -------CCCCCSSCCCCTTCCH
T ss_pred ccCccccccccccceeChHhcCH
Confidence 43211 1223356799999998
No 86
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=1e-25 Score=218.71 Aligned_cols=205 Identities=26% Similarity=0.253 Sum_probs=143.2
Q ss_pred CCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEe
Q 035895 91 KYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLS 170 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 170 (527)
++|++|++++|++++..+..+..+. +|++|++++|.+++..+..|..+++|++|++++|++++..+..|.++++|+.|+
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFP-ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCT-TCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCccEEECCCCcccccCHhHhcccc-CCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 3567777777777766555565553 577777777777766666677777777777777777766666677777777777
Q ss_pred ccCcccccccChhhhcCcccCeeeeecccCCCC-CCccccCCccCceeeCCCCCCCCCc-hhhhCCCCcc----EEEccC
Q 035895 171 FRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGS-IPTCFGNLTALRNLHLDSNELTSIP-SILWNLKDIL----YLDFWS 244 (527)
Q Consensus 171 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~lp-~~~~~l~~L~----~l~l~~ 244 (527)
+++|.+.+..+..+..+++|++|++++|++++. +|..|+++++|++|++++|++++++ ..+..+..|+ .+++++
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 777777665555677777777777777777653 4667777777777777777777654 3344444444 677777
Q ss_pred CcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEccccccee
Q 035895 245 NLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQG 297 (527)
Q Consensus 245 n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 297 (527)
|.+.+..+..+.. .+|++|++++|++++..+..|..+++|+.|++++|++..
T Consensus 187 n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 187 NPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp SCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred CcccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccc
Confidence 7776655554443 378888888888887766777888888888888888874
No 87
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=8.4e-25 Score=234.32 Aligned_cols=255 Identities=25% Similarity=0.262 Sum_probs=211.8
Q ss_pred CCCCEEEccccccccc---cccccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccE
Q 035895 44 STLKVFDVDNNYVLGR---LSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEF 120 (527)
Q Consensus 44 ~~L~~L~Ls~N~~~~~---~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~ 120 (527)
.+++.|++++|.+... ++..++.|+|++|.|+.++. .+++|++|+|++|+++++ |. . .++|++
T Consensus 40 ~~l~~L~ls~n~L~~lp~~l~~~L~~L~L~~N~l~~lp~---------~l~~L~~L~Ls~N~l~~l-p~---~-l~~L~~ 105 (622)
T 3g06_A 40 NGNAVLNVGESGLTTLPDCLPAHITTLVIPDNNLTSLPA---------LPPELRTLEVSGNQLTSL-PV---L-PPGLLE 105 (622)
T ss_dssp HCCCEEECCSSCCSCCCSCCCTTCSEEEECSCCCSCCCC---------CCTTCCEEEECSCCCSCC-CC---C-CTTCCE
T ss_pred CCCcEEEecCCCcCccChhhCCCCcEEEecCCCCCCCCC---------cCCCCCEEEcCCCcCCcC-CC---C-CCCCCE
Confidence 4589999999998632 23468999999999997654 358899999999999974 54 2 358999
Q ss_pred EEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccC
Q 035895 121 IWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKL 200 (527)
Q Consensus 121 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 200 (527)
|++++|.+++..+ .+++|++|++++|++++. |. .+++|+.|++++|++++ +|. .+.+|+.|++++|+|
T Consensus 106 L~Ls~N~l~~l~~----~l~~L~~L~L~~N~l~~l-p~---~l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l 173 (622)
T 3g06_A 106 LSIFSNPLTHLPA----LPSGLCKLWIFGNQLTSL-PV---LPPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQL 173 (622)
T ss_dssp EEECSCCCCCCCC----CCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EECcCCcCCCCCC----CCCCcCEEECCCCCCCcC-CC---CCCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCC
Confidence 9999999997544 678999999999999864 33 35899999999999985 454 356899999999999
Q ss_pred CCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhh
Q 035895 201 SGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQ 280 (527)
Q Consensus 201 ~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 280 (527)
++ +| ..+++|+.|++++|+++.+|.. +++|+.|++++|.+.. +|. .+++|++|++++|.+++ +| .
T Consensus 174 ~~-l~---~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~~-l~~---~~~~L~~L~Ls~N~L~~-lp---~ 238 (622)
T 3g06_A 174 TS-LP---MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTS-LPA---LPSGLKELIVSGNRLTS-LP---V 238 (622)
T ss_dssp SC-CC---CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSS-CCC---CCTTCCEEECCSSCCSC-CC---C
T ss_pred CC-Cc---ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCcccc-cCC---CCCCCCEEEccCCccCc-CC---C
Confidence 96 45 4578999999999999999864 4789999999999874 443 35789999999999986 55 5
Q ss_pred cCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeee
Q 035895 281 GLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 281 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
.+++|+.|++++|+|+ .+|. .+++|+.|+|++|+++. +|..+..++.|+.|+++.+.+.
T Consensus 239 ~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~-lp~~l~~l~~L~~L~L~~N~l~ 297 (622)
T 3g06_A 239 LPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTR-LPESLIHLSSETTVNLEGNPLS 297 (622)
T ss_dssp CCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCCS-CCGGGGGSCTTCEEECCSCCCC
T ss_pred CCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCCc-CCHHHhhccccCEEEecCCCCC
Confidence 6689999999999998 4565 57899999999999994 5788999999999999987774
No 88
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=3e-25 Score=214.70 Aligned_cols=204 Identities=26% Similarity=0.305 Sum_probs=156.9
Q ss_pred CCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEec
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSF 171 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 171 (527)
..+.+++++|+++. +|..+ ..+++.|++++|.+++..+..|..+++|++|++++|+++...+..|..+++|++|++
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l 92 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNI---PADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWV 92 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCC---CTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEEC
T ss_pred CCCEEEccCCCCCc-cCCCC---CCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEEC
Confidence 46788888888885 45433 246788888888887777777777888888888888877666666677777777777
Q ss_pred cCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccC
Q 035895 172 RGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPL 251 (527)
Q Consensus 172 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~ 251 (527)
++|.+++..+..|..+++|++|++++|++++..|..|..+++|++|++++|+++.+|.
T Consensus 93 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~---------------------- 150 (270)
T 2o6q_A 93 TDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPK---------------------- 150 (270)
T ss_dssp CSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT----------------------
T ss_pred CCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCH----------------------
Confidence 7777776666667777777777777777777766777777777777777777766543
Q ss_pred CccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCccccc
Q 035895 252 PSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 322 (527)
Q Consensus 252 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 322 (527)
..|..+++|++|++++|.+.+..+..|.++++|++|++++|++++..+..|..+++|+.|++++|++...
T Consensus 151 -~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 151 -GVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp -TTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred -hHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 3466778888888888888877777788899999999999999877777788899999999999988654
No 89
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=3.6e-25 Score=214.15 Aligned_cols=202 Identities=23% Similarity=0.300 Sum_probs=169.4
Q ss_pred ccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCC
Q 035895 63 IVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDL 142 (527)
Q Consensus 63 ~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 142 (527)
..+.++++++.++.++..++ ++|++|++++|++++..+..+..+. +|++|++++|.++...+..|..+++|
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~--------~~l~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~i~~~~~~~l~~L 87 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIP--------ADTKKLDLQSNKLSSLPSKAFHRLT-KLRLLYLNDNKLQTLPAGIFKELKNL 87 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCC--------TTCSEEECCSSCCSCCCTTSSSSCT-TCCEEECCSSCCSCCCTTTTSSCTTC
T ss_pred CCCEEEccCCCCCccCCCCC--------CCCCEEECcCCCCCeeCHHHhcCCC-CCCEEECCCCccCeeChhhhcCCCCC
Confidence 46789999999998766432 5799999999999987777787765 79999999999998888888999999
Q ss_pred cEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCC
Q 035895 143 ISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSN 222 (527)
Q Consensus 143 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 222 (527)
++|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|
T Consensus 88 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 167 (270)
T 2o6q_A 88 ETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNN 167 (270)
T ss_dssp CEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCC
Confidence 99999999999888888999999999999999999888888999999999999999999888888999999999999999
Q ss_pred CCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccce
Q 035895 223 ELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQ 296 (527)
Q Consensus 223 ~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 296 (527)
+++.+|.. .|..+++|++|++++|++.+..+..|..+++|+.|++++|.+.
T Consensus 168 ~l~~~~~~-----------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 168 QLKRVPEG-----------------------AFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp CCSCCCTT-----------------------TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cCcEeChh-----------------------HhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCee
Confidence 99887642 2444556666666666666555555666666666666666654
No 90
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=2.6e-25 Score=217.23 Aligned_cols=204 Identities=23% Similarity=0.255 Sum_probs=169.2
Q ss_pred CCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCC
Q 035895 87 MSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKL 166 (527)
Q Consensus 87 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 166 (527)
+.++++++++++++|.++.+ |..+ ..+++.|+|++|.+++..+..|..+++|++|+|++|.+++..+. +.+++|
T Consensus 6 ~~~l~~l~~l~~~~~~l~~i-p~~~---~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTAL-PPDL---PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EECSTTCCEEECTTSCCSSC-CSCC---CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred ccccCCccEEECCCCCCCcC-CCCC---CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 56778899999999999864 4433 34799999999999988888999999999999999999865443 788899
Q ss_pred CEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCc
Q 035895 167 QFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNL 246 (527)
Q Consensus 167 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~ 246 (527)
+.|++++|+++ .+|..+..+++|++|++++|+|++..|..|.++++|++|+|++|+++.+|.
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~----------------- 141 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPP----------------- 141 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCT-----------------
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccCh-----------------
Confidence 99999999987 677788888888999999998888777888888888888888888887653
Q ss_pred ccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccc
Q 035895 247 FVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSE 321 (527)
Q Consensus 247 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 321 (527)
..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+++ .+|..+..+.+|+.|+|++|++..
T Consensus 142 ------~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 142 ------GLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp ------TTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ------hhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 34566778888888888888766677888899999999999998 677777778889999999998753
No 91
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.93 E-value=4.3e-28 Score=252.94 Aligned_cols=321 Identities=18% Similarity=0.194 Sum_probs=194.0
Q ss_pred chhccc-CCCceeecCchh-hhcCCCCCEEEccccccccc----cc------cccceEEcccccccCCCCCCcccccCCC
Q 035895 22 RICTID-SQNKLVGIVSIT-IFNLSTLKVFDVDNNYVLGR----LS------SIVDELSLSDNYLTSSTPELSFLSSMSN 89 (527)
Q Consensus 22 ~~~~~~-s~N~l~~~~~~~-~~~l~~L~~L~Ls~N~~~~~----~~------~~l~~L~Ls~N~l~~~~~~~~~~~~~~~ 89 (527)
++..+| +.|+++...... +..+++|++|+|++|.+... ++ +.++.|+|++|.++..... .+...+..
T Consensus 4 ~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~-~l~~~l~~ 82 (461)
T 1z7x_W 4 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVH-CVLQGLQT 82 (461)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHH-HHHHTTCS
T ss_pred cceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHH-HHHHHHhh
Confidence 455666 777777655443 77788888888888876531 11 2467777777776542110 00011111
Q ss_pred C-CCCCEEEcccCCCCc----ccChhHhhccccccEEEcccCccccccchhhc-----CCcCCcEEEeecCcccccC---
Q 035895 90 C-KYLKKLDISRNPLDG----FLPRVVGNFSQSLEFIWMSDCNISGGISEEIG-----NLTDLISIDLGGNKLNGSI--- 156 (527)
Q Consensus 90 l-~~L~~L~Ls~N~l~~----~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~~--- 156 (527)
. ++|++|++++|+++. .++..+..+. +|+.|++++|.++...+..+. ..++|++|++++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~-~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 161 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLP-TLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEP 161 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCT-TCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCC-ceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHH
Confidence 1 157777777777763 3355555553 677777777777644333332 2456777777777776532
Q ss_pred -cccccCCCCCCEEeccCcccccccChhhh-----cCcccCeeeeecccCCCC----CCccccCCccCceeeCCCCCCCC
Q 035895 157 -SITLGKLQKLQFLSFRGNELEGSIPNVLC-----HLAVLFQLDLRGNKLSGS----IPTCFGNLTALRNLHLDSNELTS 226 (527)
Q Consensus 157 -~~~~~~l~~L~~L~l~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~ 226 (527)
+..+..+++|+.|++++|.+....+..+. ..++|+.|++++|.++.. ++..+..+++|++|++++|.++.
T Consensus 162 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 241 (461)
T 1z7x_W 162 LASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGD 241 (461)
T ss_dssp HHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHH
T ss_pred HHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCCh
Confidence 44455667777777777776644333333 245777777777777653 35556667777777777777664
Q ss_pred C------chhhhCCCCccEEEccCCccccc----CCccccCCCCCCEEEccCCCCCCCChhhhhcC-----CCCCEEEcc
Q 035895 227 I------PSILWNLKDILYLDFWSNLFVGP----LPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGL-----KSLQFLSLG 291 (527)
Q Consensus 227 l------p~~~~~l~~L~~l~l~~n~~~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~L~ 291 (527)
. +.....++.|++|++++|.++.. ++..+..+++|++|++++|.+.+..+..+... ++|++|+++
T Consensus 242 ~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~ 321 (461)
T 1z7x_W 242 VGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVK 321 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECT
T ss_pred HHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcC
Confidence 2 11222466777777777766643 45556667777777777777654444333322 577777777
Q ss_pred cccceee----cCCCCCCCCCCCEEeCCCCcccccCccchhh-----hccCCeeEeeeeeee
Q 035895 292 HNRLQGS----IPNSFDDLVSLESLDLSNNNLSEIIPLSLEK-----LLYLNILLIVVVILA 344 (527)
Q Consensus 292 ~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-----l~~L~~L~~~~~~~~ 344 (527)
+|.+++. ++..+..+++|+.|++++|.+++..+..+.. .+.|+.|+++.+.+.
T Consensus 322 ~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~ 383 (461)
T 1z7x_W 322 SCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS 383 (461)
T ss_dssp TSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCC
T ss_pred CCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCC
Confidence 7777643 3445556677777777777776655544443 456777776665543
No 92
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.93 E-value=6.9e-26 Score=241.06 Aligned_cols=138 Identities=22% Similarity=0.372 Sum_probs=118.2
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee-----------------------------ccCccceeEEEEEe
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF-----------------------------SCSNEDFRALVLEY 433 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~-----------------------------~~~~~~~~~lv~ey 433 (527)
.++|++.+.||+|+||+||+|+. .+|+.||||++.. .+..++..++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 46799999999999999999986 5799999998743 12345677899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC--CcEEEeecccccccCCCCC
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDN--IVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~--~~~kl~Dfg~a~~~~~~~~ 511 (527)
|+||+|.+++......+++.++..|+.||+.||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999766567889999999999999999999 9999999999999999854 899999999999875432
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
.....+||+.||||
T Consensus 312 --~~~~~~GT~~y~AP 325 (573)
T 3uto_A 312 --SVKVTTGTAEFAAP 325 (573)
T ss_dssp --EEEEECSSGGGCCH
T ss_pred --ceeeeEECccccCH
Confidence 22345799999998
No 93
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.93 E-value=8.5e-26 Score=232.79 Aligned_cols=147 Identities=24% Similarity=0.397 Sum_probs=124.1
Q ss_pred HHHHhhhcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee--------------------------------ccCc
Q 035895 377 YQELLRATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF--------------------------------SCSN 423 (527)
Q Consensus 377 ~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~--------------------------------~~~~ 423 (527)
+.++....++|++.++||+|+||+||+|+.. +++.||||++.. .+..
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 3445566789999999999999999999975 578999999752 1234
Q ss_pred cceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 035895 424 EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIA 503 (527)
Q Consensus 424 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a 503 (527)
++..++|||||+||+|.+++...+..+++..+..++.|++.||+||| +.+||||||||+|||++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 56778999999999999999876667899999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCccceeccccccccccC
Q 035895 504 KLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 504 ~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+....... ...+..+||++||||
T Consensus 223 ~~~~~~~~-~~~~~~~GT~~Y~AP 245 (437)
T 4aw2_A 223 LKLMEDGT-VQSSVAVGTPDYISP 245 (437)
T ss_dssp EECCTTSC-EECCSCCSCGGGCCH
T ss_pred hhcccCCC-cccccccCCcCeeCh
Confidence 87653322 223345799999998
No 94
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.93 E-value=2.5e-25 Score=215.50 Aligned_cols=205 Identities=26% Similarity=0.290 Sum_probs=131.3
Q ss_pred cccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeee
Q 035895 117 SLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196 (527)
Q Consensus 117 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 196 (527)
+|+.|++++|.++.. ..+..+++|++|++++|++++. ..+..+++|++|++++|.+++..+..|..+++|++|+++
T Consensus 42 ~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 455555555555421 2345555566666666655542 245556666666666666655555555566666666666
Q ss_pred cccCCCCCCccccCCccCceeeCCCCCCCCCchh-hhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCC
Q 035895 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSI-LWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDI 275 (527)
Q Consensus 197 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 275 (527)
+|++++..+..|+.+++|++|++++|+++++|.. +..+++|+.|++++|.+.+..+..++.+++|++|++++|++.+..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP 197 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccC
Confidence 6666655555566666666666666666665443 345556666666666665555566777888888888888888777
Q ss_pred hhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhcc
Q 035895 276 PTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLY 332 (527)
Q Consensus 276 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 332 (527)
|..|..+++|++|++++|.+.+ .+++|+.|+++.|.++|.+|..++.+..
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 198 DGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCBCC-------CTTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred HHHHhCCcCCCEEEccCCCccc-------cCcHHHHHHHHHHhCCCcccCcccccCC
Confidence 7778888888888888887763 3456888888888888888877665543
No 95
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.92 E-value=2.1e-25 Score=220.24 Aligned_cols=225 Identities=20% Similarity=0.212 Sum_probs=187.2
Q ss_pred CCCCEEEcccCCCCcccChh---HhhccccccEEEcccCccccccchhh--cCCcCCcEEEeecCcccccCc----cccc
Q 035895 91 KYLKKLDISRNPLDGFLPRV---VGNFSQSLEFIWMSDCNISGGISEEI--GNLTDLISIDLGGNKLNGSIS----ITLG 161 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~---~~~~~~~L~~L~Ls~n~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~~----~~~~ 161 (527)
..++.|.+.++.++...-.. +... .+|++|++++|.+++..|..+ ..+++|++|+|++|++++..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAY-SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHH-SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhccc-CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 35788888888876321111 1122 359999999999999988888 899999999999999987544 4456
Q ss_pred CCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCC---CC-CccccCCccCceeeCCCCCCCCCchh----hhC
Q 035895 162 KLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSG---SI-PTCFGNLTALRNLHLDSNELTSIPSI----LWN 233 (527)
Q Consensus 162 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~---~~-p~~~~~l~~L~~L~L~~N~l~~lp~~----~~~ 233 (527)
.+++|++|++++|.+.+..|..|..+++|++|+|++|++.+ .. +..++.+++|++|++++|+++.+|.. +..
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 79999999999999998888999999999999999999865 22 33457899999999999999988763 467
Q ss_pred CCCccEEEccCCcccccCCccccCC---CCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCC
Q 035895 234 LKDILYLDFWSNLFVGPLPSKIGNL---KVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLE 310 (527)
Q Consensus 234 l~~L~~l~l~~n~~~~~~p~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 310 (527)
+++|++|++++|.+.+..|..+..+ ++|++|++++|+++ .+|..+. ++|++|+|++|++++. |. +..+++|+
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~ 297 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVD 297 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCS
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCcc
Confidence 8999999999999999888888777 69999999999998 5677664 7999999999999964 44 78889999
Q ss_pred EEeCCCCcccc
Q 035895 311 SLDLSNNNLSE 321 (527)
Q Consensus 311 ~L~ls~N~l~~ 321 (527)
.|++++|+++.
T Consensus 298 ~L~L~~N~l~~ 308 (310)
T 4glp_A 298 NLTLDGNPFLV 308 (310)
T ss_dssp CEECSSTTTSC
T ss_pred EEECcCCCCCC
Confidence 99999999875
No 96
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.92 E-value=1.6e-25 Score=229.19 Aligned_cols=147 Identities=26% Similarity=0.424 Sum_probs=123.5
Q ss_pred HHHHhhhcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee--------------------------------ccCc
Q 035895 377 YQELLRATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF--------------------------------SCSN 423 (527)
Q Consensus 377 ~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~--------------------------------~~~~ 423 (527)
..+.....++|++.++||+|+||+||+|+. .+|+.||||++.. .+..
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 344455678899999999999999999997 4789999999852 1234
Q ss_pred cceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 035895 424 EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIA 503 (527)
Q Consensus 424 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a 503 (527)
++..++||||++||+|.+++.+.+..+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhh
Confidence 45678999999999999999876667889899999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCccceeccccccccccC
Q 035895 504 KLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 504 ~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+....... ......+||++||||
T Consensus 210 ~~~~~~~~-~~~~~~~Gt~~Y~AP 232 (412)
T 2vd5_A 210 LKLRADGT-VRSLVAVGTPDYLSP 232 (412)
T ss_dssp EECCTTSC-EECSSCCSCGGGCCH
T ss_pred eeccCCCc-cccceeccccCcCCH
Confidence 87754322 122345789999998
No 97
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.92 E-value=1.7e-25 Score=226.10 Aligned_cols=143 Identities=21% Similarity=0.268 Sum_probs=117.3
Q ss_pred hhcCCccccceeccCCceEEEEEE------ccCCcEEEEEEEee-----------------------------ccCccce
Q 035895 382 RATDGFSANNLIGRGSFGSVYKAR------LQDGMEFAIKVFHF-----------------------------SCSNEDF 426 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~------~~~~~~vavK~~~~-----------------------------~~~~~~~ 426 (527)
...+.|.+.+.||+|+||+||+|. ..+++.||||++.. .+..++.
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 345679999999999999999994 45689999999742 1223456
Q ss_pred eEEEEEeccCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-----------
Q 035895 427 RALVLEYTTNGSLEKVLYS----SNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD----------- 491 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~----------- 491 (527)
.++|||||++|+|.+++.. .+..+++..+..|+.|++.||+||| +++||||||||+|||++.
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC------
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccccc
Confidence 7899999999999999975 2456899999999999999999999 999999999999999998
Q ss_pred CCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 492 NIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 492 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
++.+||+|||+|+.+.........+..+||++||||
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aP 254 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCV 254 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCH
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCCh
Confidence 899999999999765422222233456789999998
No 98
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=1.1e-24 Score=206.61 Aligned_cols=196 Identities=19% Similarity=0.227 Sum_probs=126.7
Q ss_pred CCCEEEcccCCCCcccChhHhhccccccEEEcccCc-cccccchhhcCCcCCcEEEeec-CcccccCcccccCCCCCCEE
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCN-ISGGISEEIGNLTDLISIDLGG-NKLNGSISITLGKLQKLQFL 169 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 169 (527)
+|++|++++|+++++.+..+..+. +|+.|++++|. ++.+.+..|..+++|++|++++ |++++..+..|..+++|+.|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~-~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLP-NISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCT-TCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcceEECHHHccCCC-CCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 566777777777665555555543 57777777775 6666666677777777777776 77776666667777777777
Q ss_pred eccCcccccccChhhhcCcccC---eeeeecc-cCCCCCCccccCCccCc-eeeCCCCCCCCCchhhhCCCCccEEEccC
Q 035895 170 SFRGNELEGSIPNVLCHLAVLF---QLDLRGN-KLSGSIPTCFGNLTALR-NLHLDSNELTSIPSILWNLKDILYLDFWS 244 (527)
Q Consensus 170 ~l~~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~lp~~~~~l~~L~~l~l~~ 244 (527)
++++|.+++ +|. |..+++|+ .|++++| ++++..+..|.++++|+ +|++++|+++.+|...+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~------------ 176 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAF------------ 176 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTT------------
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhc------------
Confidence 777777764 444 66666666 7777777 77666666677777777 77777777766654332
Q ss_pred CcccccCCccccCCCCCCEEEccCCC-CCCCChhhhhcC-CCCCEEEcccccceeecCCCCCCCCCCCEEeCCCC
Q 035895 245 NLFVGPLPSKIGNLKVLTRIDFSRNN-LLGDIPTTIQGL-KSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNN 317 (527)
Q Consensus 245 n~~~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 317 (527)
.. ++|++|++++|+ +.+..+..|.++ ++|++|++++|++++. |.. .+++|+.|+++++
T Consensus 177 -----------~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 177 -----------NG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp -----------TT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred -----------CC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 22 456666666663 655555566666 6677777777776643 332 4556667776655
No 99
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.92 E-value=8.9e-25 Score=211.59 Aligned_cols=210 Identities=20% Similarity=0.239 Sum_probs=162.5
Q ss_pred CCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCC
Q 035895 88 SNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQ 167 (527)
Q Consensus 88 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 167 (527)
..+++|+.|++++|.++.. + .+..+ ++|++|++++|.+++. +.+..+++|++|++++|++++..+..|..+++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~~~-~-~l~~l-~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 112 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIKSV-Q-GIQYL-PNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLK 112 (272)
T ss_dssp HHHTTCCEEECTTSCCCCC-T-TGGGC-TTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred ccccceeeeeeCCCCcccc-c-ccccC-CCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCC
Confidence 4566777777777777643 2 34444 3677777777777653 3677778888888888888777776777888888
Q ss_pred EEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchh-hhCCCCccEEEccCCc
Q 035895 168 FLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSI-LWNLKDILYLDFWSNL 246 (527)
Q Consensus 168 ~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~-~~~l~~L~~l~l~~n~ 246 (527)
+|++++|++++..+..|..+++|++|++++|++++..+..|+.+++|++|++++|+++++|.. +..+++|+.|++++|.
T Consensus 113 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 113 ELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp EEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCc
Confidence 888888888776666777888888888888888877777778888888888888888877654 4667888888888888
Q ss_pred ccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCC
Q 035895 247 FVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSL 309 (527)
Q Consensus 247 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 309 (527)
+.+..|..+..+++|++|++++|.+.+. +++|+.|+++.|.++|.+|..++.+...
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~~ 248 (272)
T 3rfs_A 193 LKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAPD 248 (272)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCGG
T ss_pred CCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCCC
Confidence 8877777788999999999999988754 4478899999999999999998876543
No 100
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.8e-24 Score=209.98 Aligned_cols=203 Identities=22% Similarity=0.207 Sum_probs=158.9
Q ss_pred hcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCc
Q 035895 136 IGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALR 215 (527)
Q Consensus 136 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 215 (527)
+..+++++++++++|.++.. |..+ .++++.|++++|.+++..|..|..+++|+.|++++|.|++..+. +.+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~i-p~~~--~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTAL-PPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCSSC-CSCC--CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTCC
T ss_pred ccccCCccEEECCCCCCCcC-CCCC--CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcCC
Confidence 44566667777777776643 3222 25677777777777766666777777777777777777654332 6677777
Q ss_pred eeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccc
Q 035895 216 NLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRL 295 (527)
Q Consensus 216 ~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 295 (527)
+|++++|+++.+|..+..+++|++|++++|++.+..|..|..+++|++|++++|++.+..+..|..+++|+.|+|++|++
T Consensus 81 ~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 81 TLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp EEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred EEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 88888887777777777777788888888877777778899999999999999999988888899999999999999999
Q ss_pred eeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEeeeeeee
Q 035895 296 QGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 296 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~~~~~~ 344 (527)
++..+..|..+++|+.|+|++|+++. +|..+..+..|+.+.+..+.+.
T Consensus 161 ~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 161 TELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp SCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBC
T ss_pred CccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCcc
Confidence 98777788999999999999999985 5666677788999988877663
No 101
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.92 E-value=5.9e-25 Score=208.57 Aligned_cols=196 Identities=18% Similarity=0.194 Sum_probs=129.3
Q ss_pred cccEEEcccCccccccchhhcCCcCCcEEEeecCc-ccccCcccccCCCCCCEEeccC-cccccccChhhhcCcccCeee
Q 035895 117 SLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNK-LNGSISITLGKLQKLQFLSFRG-NELEGSIPNVLCHLAVLFQLD 194 (527)
Q Consensus 117 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~~~~l~~L~~L~ 194 (527)
+|+.|++++|++++..+..|..+++|++|++++|+ +++..+..|..+++|+.|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 56666666666665555566666666666666664 5555555555666666666665 555544445555555555555
Q ss_pred eecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCC-cccccCCccccCCCCCC-EEEccCCCCC
Q 035895 195 LRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSN-LFVGPLPSKIGNLKVLT-RIDFSRNNLL 272 (527)
Q Consensus 195 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n-~~~~~~p~~~~~l~~L~-~L~Ls~N~l~ 272 (527)
+++|++++ +|. |..+++|+ .|++|++++| .+.+..+..|..+++|+ +|++++|.+.
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~--------------------~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~ 169 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTD--------------------IFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT 169 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCC--------------------SEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC
T ss_pred CCCCCCcc-ccc-cccccccc--------------------cccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc
Confidence 55555554 333 55555554 0014444444 44444455678889999 9999999998
Q ss_pred CCChhhhhcCCCCCEEEccccc-ceeecCCCCCCC-CCCCEEeCCCCcccccCccchhhhccCCeeEe
Q 035895 273 GDIPTTIQGLKSLQFLSLGHNR-LQGSIPNSFDDL-VSLESLDLSNNNLSEIIPLSLEKLLYLNILLI 338 (527)
Q Consensus 273 ~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~ 338 (527)
...+..|.. ++|++|++++|+ +++..+..|.++ ++|+.|++++|+++++++..+. .|+.|.+
T Consensus 170 ~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~~~~---~L~~L~l 233 (239)
T 2xwt_C 170 SVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLE---HLKELIA 233 (239)
T ss_dssp EECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCTTCT---TCSEEEC
T ss_pred ccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChhHhc---cCceeec
Confidence 544455555 899999999995 998888899999 9999999999999987666444 4444443
No 102
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.91 E-value=7e-25 Score=224.24 Aligned_cols=144 Identities=26% Similarity=0.420 Sum_probs=120.6
Q ss_pred HHHhhhcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee--------------------------------ccCcc
Q 035895 378 QELLRATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF--------------------------------SCSNE 424 (527)
Q Consensus 378 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~--------------------------------~~~~~ 424 (527)
.++....++|++.++||+|+||+||+|+.. +++.||+|++.. .+..+
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 344556788999999999999999999865 689999999742 12345
Q ss_pred ceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccc
Q 035895 425 DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504 (527)
Q Consensus 425 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~ 504 (527)
+..++|||||+||+|.+++... .+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~ 216 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 216 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeE
Confidence 5678999999999999998753 4788888999999999999999 9999999999999999999999999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
....... ......+||++||||
T Consensus 217 ~~~~~~~-~~~~~~~gt~~Y~AP 238 (410)
T 3v8s_A 217 KMNKEGM-VRCDTAVGTPDYISP 238 (410)
T ss_dssp ECCTTSE-EECCSCCSCGGGCCH
T ss_pred eeccCCc-ccccCCcCCccccCH
Confidence 7754321 122346799999998
No 103
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.91 E-value=1.5e-24 Score=217.78 Aligned_cols=139 Identities=32% Similarity=0.424 Sum_probs=112.8
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec---------------------------------cCccceeE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS---------------------------------CSNEDFRA 428 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~---------------------------------~~~~~~~~ 428 (527)
..++|++.++||+|+||+||+|+. .+++.||||++... +..++..+
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 457899999999999999999986 46899999997521 12345678
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
+|||||+||+|.+++... ..+++.++..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+....
T Consensus 101 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 999999999999999764 35788899999999999999999 99999999999999999999999999999986432
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
.. ......+||++||||
T Consensus 177 ~~--~~~~~~~gt~~y~aP 193 (353)
T 3txo_A 177 NG--VTTATFCGTPDYIAP 193 (353)
T ss_dssp -----------CCGGGCCH
T ss_pred CC--ccccccCCCcCeECh
Confidence 22 122345789999998
No 104
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.91 E-value=3.6e-24 Score=212.86 Aligned_cols=155 Identities=41% Similarity=0.599 Sum_probs=128.5
Q ss_pred cccccHHHHhhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec------------------------------c
Q 035895 372 RRRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS------------------------------C 421 (527)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~------------------------------~ 421 (527)
.+.++++++....++|+..+.||+|+||.||+|+.++++.||||++... +
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 3567888999999999999999999999999999888999999987431 2
Q ss_pred CccceeEEEEEeccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 035895 422 SNEDFRALVLEYTTNGSLEKVLYSSN---YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLS 498 (527)
Q Consensus 422 ~~~~~~~lv~ey~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~ 498 (527)
..++..++||||+++|+|.+++.... ..+++..+..++.+++.||+|||..+..+|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 33456689999999999999997643 248899999999999999999993223399999999999999999999999
Q ss_pred ecccccccCCCCCccceeccccccccccC
Q 035895 499 DFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 499 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|||+++....... .......||++|+||
T Consensus 177 Dfg~~~~~~~~~~-~~~~~~~gt~~y~aP 204 (326)
T 3uim_A 177 DFGLAKLMDYKDT-HVTTAVRGTIGHIAP 204 (326)
T ss_dssp CCSSCEECCSSSS-CEECCCCSCGGGCCH
T ss_pred cCccccccCcccc-cccccccCCcCccCH
Confidence 9999987753322 223345589999998
No 105
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.91 E-value=8.6e-24 Score=212.35 Aligned_cols=239 Identities=18% Similarity=0.139 Sum_probs=147.5
Q ss_pred EEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCcccccc-chhhcCCcCCcE-
Q 035895 67 LSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGI-SEEIGNLTDLIS- 144 (527)
Q Consensus 67 L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~-~~~~~~l~~L~~- 144 (527)
++-++++|+++|..+ .+++++|+|++|+|+.+.+..|.++. +|++|+|++|.+.+.+ +..|.+++++.+
T Consensus 14 v~C~~~~Lt~iP~~l--------~~~l~~L~Ls~N~i~~i~~~~f~~l~-~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~ 84 (350)
T 4ay9_X 14 FLCQESKVTEIPSDL--------PRNAIELRFVLTKLRVIQKGAFSGFG-DLEKIEISQNDVLEVIEADVFSNLPKLHEI 84 (350)
T ss_dssp EEEESTTCCSCCTTC--------CTTCSEEEEESCCCSEECTTSSTTCT-TCCEEEEECCTTCCEECTTSBCSCTTCCEE
T ss_pred EEecCCCCCccCcCc--------CCCCCEEEccCCcCCCcCHHHHcCCC-CCCEEECcCCCCCCccChhHhhcchhhhhh
Confidence 444555555554432 14567777777777765445565554 5777777777764433 445667766654
Q ss_pred EEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeec-ccCCCCCCccccCCc-cCceeeCCCC
Q 035895 145 IDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRG-NKLSGSIPTCFGNLT-ALRNLHLDSN 222 (527)
Q Consensus 145 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~L~~N 222 (527)
+.++.|+++...+..|..+++|+.|++++|+++...+..+.....+..|++.+ |++....+..|..+. .++.|++++|
T Consensus 85 l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp EEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred hcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccc
Confidence 55566777777677777777777777777777766555666666677777754 566666666676664 4777888888
Q ss_pred CCCCCchhhhCCCCccEEEccCCcccccC-CccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCC
Q 035895 223 ELTSIPSILWNLKDILYLDFWSNLFVGPL-PSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPN 301 (527)
Q Consensus 223 ~l~~lp~~~~~l~~L~~l~l~~n~~~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 301 (527)
+|+.+|...+...+|+.+++++++..+.+ ++.|..+++|++||+++|+++...+..|. +|+.|.+.++.-...+|
T Consensus 165 ~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~~lP- 240 (350)
T 4ay9_X 165 GIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNLKKLP- 240 (350)
T ss_dssp CCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTCCCCC-
T ss_pred cccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCcCcCC-
Confidence 88777776666666777777643333333 34567777777777777777654443333 34444433332222455
Q ss_pred CCCCCCCCCEEeCCCCc
Q 035895 302 SFDDLVSLESLDLSNNN 318 (527)
Q Consensus 302 ~~~~l~~L~~L~ls~N~ 318 (527)
.+..+++|+.++++++.
T Consensus 241 ~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 241 TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CTTTCCSCCEEECSCHH
T ss_pred CchhCcChhhCcCCCCc
Confidence 36667777777776543
No 106
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.91 E-value=3.5e-24 Score=217.90 Aligned_cols=139 Identities=29% Similarity=0.370 Sum_probs=116.7
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec---------------------------------cCccceeE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS---------------------------------CSNEDFRA 428 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~---------------------------------~~~~~~~~ 428 (527)
..++|++.++||+|+||+||+|+.+ +++.||||++... +..++..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 4567999999999999999999864 6889999998531 12345678
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
+|||||+||+|..++... ..+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+....
T Consensus 130 lV~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 999999999999998764 35788899999999999999999 99999999999999999999999999999986432
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... .....+||+.||||
T Consensus 206 ~~~--~~~~~~gt~~Y~aP 222 (396)
T 4dc2_A 206 PGD--TTSTFCGTPNYIAP 222 (396)
T ss_dssp TTC--CBCCCCBCGGGCCH
T ss_pred CCC--ccccccCCcccCCc
Confidence 221 22346789999998
No 107
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.91 E-value=3.9e-24 Score=214.03 Aligned_cols=141 Identities=28% Similarity=0.405 Sum_probs=116.8
Q ss_pred hhhcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec---------------------------------cCccce
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS---------------------------------CSNEDF 426 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~---------------------------------~~~~~~ 426 (527)
....++|++.+.||+|+||.||+|+.+ +++.||||+++.. +..++.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345688999999999999999999974 6899999998531 123456
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
.++||||++||+|.+++... ..+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+..
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 78999999999999999764 35788899999999999999999 999999999999999999999999999999865
Q ss_pred CCCCCccceeccccccccccC
Q 035895 507 TGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~~~~~~~~t~~y~aP 527 (527)
..... .....+||++|+||
T Consensus 169 ~~~~~--~~~~~~gt~~y~aP 187 (345)
T 1xjd_A 169 MLGDA--KTNTFCGTPDYIAP 187 (345)
T ss_dssp CCTTC--CBCCCCSCGGGCCH
T ss_pred ccCCC--cccCCCCCcccCCh
Confidence 32221 12345789999998
No 108
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.90 E-value=4.6e-24 Score=212.90 Aligned_cols=138 Identities=28% Similarity=0.424 Sum_probs=116.0
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee--------------------------------ccCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF--------------------------------SCSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~--------------------------------~~~~~~~~~lv 430 (527)
.++|++.+.||+|+||+||+|+.. +|+.||||+++. .+...+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467999999999999999999864 689999999853 12234567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||++||+|.+++... ..++..++..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+......
T Consensus 84 ~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp EECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999998754 35788889999999999999999 9999999999999999999999999999998643222
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
. .....+||+.||||
T Consensus 160 ~--~~~~~~gt~~y~aP 174 (337)
T 1o6l_A 160 A--TMKTFCGTPEYLAP 174 (337)
T ss_dssp C--CBCCCEECGGGCCG
T ss_pred C--cccccccChhhCCh
Confidence 1 22345789999998
No 109
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.90 E-value=2.3e-24 Score=213.82 Aligned_cols=152 Identities=39% Similarity=0.614 Sum_probs=124.0
Q ss_pred ccccHHHHhhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEee-----------------------------ccCc
Q 035895 373 RRFSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHF-----------------------------SCSN 423 (527)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~-----------------------------~~~~ 423 (527)
.++.+.++...+++|+..+.||+|+||.||+|+.++++.||||++.. .+..
T Consensus 27 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 106 (321)
T 2qkw_B 27 YRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE 106 (321)
T ss_dssp ---CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCC
T ss_pred eeecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 34445556678899999999999999999999998899999998642 1234
Q ss_pred cceeEEEEEeccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeec
Q 035895 424 EDFRALVLEYTTNGSLEKVLYSSN---YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDF 500 (527)
Q Consensus 424 ~~~~~lv~ey~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Df 500 (527)
++..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +++|+||||||+||+++.++.+|++||
T Consensus 107 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Df 183 (321)
T 2qkw_B 107 RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDF 183 (321)
T ss_dssp TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeec
Confidence 456789999999999999886543 24789999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCccceeccccccccccC
Q 035895 501 GIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 501 g~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|+++...............||+.|+||
T Consensus 184 g~~~~~~~~~~~~~~~~~~gt~~y~aP 210 (321)
T 2qkw_B 184 GISKKGTELDQTHLSTVVKGTLGYIDP 210 (321)
T ss_dssp TTCEECSSSSCCCCBCCCEEETTTCCH
T ss_pred ccccccccccccccccccCCCccccCH
Confidence 999875433222223345588999998
No 110
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.90 E-value=3.9e-24 Score=214.70 Aligned_cols=139 Identities=24% Similarity=0.329 Sum_probs=116.3
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec---------------------------------cCccceeE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS---------------------------------CSNEDFRA 428 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~---------------------------------~~~~~~~~ 428 (527)
..++|++.+.||+|+||.||+|+.. +++.||||++... +..++..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 4678999999999999999999975 5789999997521 12345678
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
+||||++||+|.+++...+ .+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+|+....
T Consensus 98 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999997643 5788899999999999999999 99999999999999999999999999999986432
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... .....+||+.||||
T Consensus 174 ~~~--~~~~~~gt~~y~aP 190 (353)
T 2i0e_A 174 DGV--TTKTFCGTPDYIAP 190 (353)
T ss_dssp TTC--CBCCCCSCGGGCCH
T ss_pred CCc--ccccccCCccccCh
Confidence 221 22345789999998
No 111
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.90 E-value=3e-23 Score=198.37 Aligned_cols=179 Identities=27% Similarity=0.317 Sum_probs=114.5
Q ss_pred ccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeec
Q 035895 118 LEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRG 197 (527)
Q Consensus 118 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 197 (527)
.+.++++++.++. +|..+. +++++|+|++|++++..+..|..+++|++|++++|.+++..|..|..+++|++|++++
T Consensus 16 ~~~l~~~~~~l~~-~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 92 (251)
T 3m19_A 16 KKEVDCQGKSLDS-VPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLAN 92 (251)
T ss_dssp GTEEECTTCCCSS-CCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CeEEecCCCCccc-cCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCC
Confidence 4445555555442 222222 3455555555555555555555556666666666666555555556666666666666
Q ss_pred ccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChh
Q 035895 198 NKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPT 277 (527)
Q Consensus 198 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 277 (527)
|++++..+..|..+++|++|+|++|+++.+|. ..|..+++|++|+|++|++.+..+.
T Consensus 93 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-----------------------~~~~~l~~L~~L~Ls~N~l~~~~~~ 149 (251)
T 3m19_A 93 NQLASLPLGVFDHLTQLDKLYLGGNQLKSLPS-----------------------GVFDRLTKLKELRLNTNQLQSIPAG 149 (251)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT-----------------------TTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CcccccChhHhcccCCCCEEEcCCCcCCCcCh-----------------------hHhccCCcccEEECcCCcCCccCHH
Confidence 66665555566666666666666666655442 3355667777777777777766666
Q ss_pred hhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCccccc
Q 035895 278 TIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 322 (527)
Q Consensus 278 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 322 (527)
.|..+++|++|+|++|++++..+..|..+++|+.|++++|++...
T Consensus 150 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 150 AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred HcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 777888888888888888877777788888888888888888764
No 112
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=3.2e-23 Score=204.33 Aligned_cols=191 Identities=23% Similarity=0.352 Sum_probs=107.8
Q ss_pred cccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeee
Q 035895 117 SLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196 (527)
Q Consensus 117 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 196 (527)
+|+.|++++|.++.. + .+..+++|++|++++|++++..+ +..+++|+.|++++|.+++. +.+..+++|+.|+++
T Consensus 42 ~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCCEEECC
Confidence 344444444444432 2 34445555555555555543332 45555555555555555432 235555555555555
Q ss_pred cccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCCh
Q 035895 197 GNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP 276 (527)
Q Consensus 197 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 276 (527)
+|++++. |. +..+++|++|++++|+++.++. +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+
T Consensus 116 ~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 116 STQITDV-TP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp TSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh
Confidence 5555542 21 5555555555555555555544 4455555555555555544222 5667777777777777765433
Q ss_pred hhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCccccc
Q 035895 277 TTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 322 (527)
Q Consensus 277 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 322 (527)
+..+++|++|++++|++++..| +..+++|+.|++++|++++.
T Consensus 191 --l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 191 --LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp --GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred --hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 6777777777777777775443 67777777888877777653
No 113
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.90 E-value=1.3e-25 Score=228.69 Aligned_cols=238 Identities=20% Similarity=0.217 Sum_probs=169.0
Q ss_pred cCCCCCCCCEEEcccCCCCcccChh----HhhccccccEEEcccCc---cccccchhh-------cCCcCCcEEEeecCc
Q 035895 86 SMSNCKYLKKLDISRNPLDGFLPRV----VGNFSQSLEFIWMSDCN---ISGGISEEI-------GNLTDLISIDLGGNK 151 (527)
Q Consensus 86 ~~~~l~~L~~L~Ls~N~l~~~~~~~----~~~~~~~L~~L~Ls~n~---l~~~~~~~~-------~~l~~L~~L~L~~N~ 151 (527)
.+..+++|++|+|++|.++...+.. +..+ ++|++|+|++|. +++.+|..+ ..+++|++|+|++|+
T Consensus 27 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~-~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 27 VLLEDDSVKEIVLSGNTIGTEAARWLSENIASK-KDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHCSCCCEEECTTSEECHHHHHHHHHTTTTC-TTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHhcCCCccEEECCCCCCCHHHHHHHHHHHHhC-CCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 3455677777788777777653333 2233 367777777753 333444444 677888888888888
Q ss_pred ccc----cCcccccCCCCCCEEeccCcccccccChh----hhcC---------cccCeeeeecccCC-CCCC---ccccC
Q 035895 152 LNG----SISITLGKLQKLQFLSFRGNELEGSIPNV----LCHL---------AVLFQLDLRGNKLS-GSIP---TCFGN 210 (527)
Q Consensus 152 l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~p~~----~~~l---------~~L~~L~L~~N~l~-~~~p---~~~~~ 210 (527)
++. .++..+..+++|+.|+|++|.++...+.. +..+ ++|++|++++|+++ ...| ..+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 876 35666777888888888888886443333 3333 78888888888886 3344 35667
Q ss_pred CccCceeeCCCCCCCC------CchhhhCCCCccEEEccCCccc----ccCCccccCCCCCCEEEccCCCCCCC----Ch
Q 035895 211 LTALRNLHLDSNELTS------IPSILWNLKDILYLDFWSNLFV----GPLPSKIGNLKVLTRIDFSRNNLLGD----IP 276 (527)
Q Consensus 211 l~~L~~L~L~~N~l~~------lp~~~~~l~~L~~l~l~~n~~~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p 276 (527)
+++|++|++++|+++. +|..+..+++|+.|++++|.+. ..+|..+..+++|++|+|++|.+.+. +|
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 7888888888888872 2336667788888888888875 56677788888888889988888765 45
Q ss_pred hhhhc--CCCCCEEEccccccee----ecCCCC-CCCCCCCEEeCCCCcccccCc
Q 035895 277 TTIQG--LKSLQFLSLGHNRLQG----SIPNSF-DDLVSLESLDLSNNNLSEIIP 324 (527)
Q Consensus 277 ~~~~~--l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~ls~N~l~~~~p 324 (527)
..+.. +++|++|+|++|.+++ .+|..+ ..+++|+.|++++|++++..+
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 66643 8889999999998886 366666 557888999999998887654
No 114
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.90 E-value=1.7e-24 Score=213.77 Aligned_cols=136 Identities=29% Similarity=0.335 Sum_probs=113.9
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEee--------------------------------ccCccceeEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF--------------------------------SCSNEDFRALVL 431 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~--------------------------------~~~~~~~~~lv~ 431 (527)
++|+..+.||+|+||+||+|+.. +++.||||++.. .+...+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 46999999999999999999875 789999998632 123345678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
||+ +|+|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 67999998877677899999999999999999999 8999999999999999999999999999998764332
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
......||++|+||
T Consensus 212 --~~~~~~gt~~y~aP 225 (311)
T 3p1a_A 212 --AGEVQEGDPRYMAP 225 (311)
T ss_dssp -----CCCCCGGGCCG
T ss_pred --CCcccCCCccccCH
Confidence 12334589999998
No 115
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.90 E-value=5.2e-24 Score=211.83 Aligned_cols=139 Identities=27% Similarity=0.400 Sum_probs=118.2
Q ss_pred hhcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccceeEE
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNEDFRAL 429 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~~~~l 429 (527)
...++|++.+.||+|+||.||+|+. .+|+.||||++... +..++..++
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 3467899999999999999999986 67999999997531 223456789
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++...+ .++...+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+.....
T Consensus 92 v~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHG-RMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EECCCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEECCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 999999999999987643 5788889999999999999999 999999999999999999999999999999876533
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
. .....+||++|+||
T Consensus 168 ~---~~~~~~gt~~y~aP 182 (328)
T 3fe3_A 168 G---KLDAFCGAPPYAAP 182 (328)
T ss_dssp C---GGGTTSSSGGGCCH
T ss_pred C---ccccccCCcceeCc
Confidence 2 22345689999998
No 116
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.90 E-value=5.4e-24 Score=215.43 Aligned_cols=141 Identities=26% Similarity=0.452 Sum_probs=115.4
Q ss_pred cCCccccceeccCCceEEEEEEc--------cCCcEEEEEEEee-------------------------------ccCcc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL--------QDGMEFAIKVFHF-------------------------------SCSNE 424 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~--------~~~~~vavK~~~~-------------------------------~~~~~ 424 (527)
.++|++.+.||+|+||.||+|+. .++..||||+++. .+..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 46789999999999999999975 2456799998742 12344
Q ss_pred ceeEEEEEeccCCcHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee
Q 035895 425 DFRALVLEYTTNGSLEKVLYSSN---------------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL 489 (527)
Q Consensus 425 ~~~~lv~ey~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill 489 (527)
+..++||||+++|+|.+++.... ..+++.++..++.||+.||+||| +++|+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence 56789999999999999997643 24788899999999999999999 9999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 490 DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 490 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+.++.+||+|||+|+...............+|+.||||
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP 274 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 274 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECH
Confidence 99999999999999976543322223344567889998
No 117
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=3.1e-25 Score=223.95 Aligned_cols=237 Identities=20% Similarity=0.245 Sum_probs=136.7
Q ss_pred CCCCEEEcccCCCCcccC----hhHhhccccccEEEcccCccccccchhhcCC-----cCCcEEEeecCcccccCccccc
Q 035895 91 KYLKKLDISRNPLDGFLP----RVVGNFSQSLEFIWMSDCNISGGISEEIGNL-----TDLISIDLGGNKLNGSISITLG 161 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~----~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~~~~~~ 161 (527)
++|++|||++|.+++..+ ..+..+..+|+.|+|++|.++...+..+..+ ++|++|+|++|++++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 335556666665554433 3333332245566666665555544444443 5566666666665544443222
Q ss_pred ----CC-CCCCEEeccCcccccccChhhhc-----CcccCeeeeecccCCCCCC----ccccCCc-cCceeeCCCCCCCC
Q 035895 162 ----KL-QKLQFLSFRGNELEGSIPNVLCH-----LAVLFQLDLRGNKLSGSIP----TCFGNLT-ALRNLHLDSNELTS 226 (527)
Q Consensus 162 ----~l-~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~ 226 (527)
.+ ++|+.|++++|.+++..+..+.. .++|++|+|++|.++...+ ..+..++ +|++|+|++|+++.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~ 181 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLAS 181 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCch
Confidence 22 55666666666665444333322 2356666666666653222 2233333 56666666666654
Q ss_pred Cch-----hhhCC-CCccEEEccCCccccc----CCccccC-CCCCCEEEccCCCCCCCChh----hhhcCCCCCEEEcc
Q 035895 227 IPS-----ILWNL-KDILYLDFWSNLFVGP----LPSKIGN-LKVLTRIDFSRNNLLGDIPT----TIQGLKSLQFLSLG 291 (527)
Q Consensus 227 lp~-----~~~~l-~~L~~l~l~~n~~~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~ 291 (527)
.+. .+... ++|++|++++|.+... ++..+.. .++|++|+|++|.+.+..+. .+..+++|++|+++
T Consensus 182 ~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~ 261 (362)
T 3goz_A 182 KNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLD 261 (362)
T ss_dssp SCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEE
T ss_pred hhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEec
Confidence 321 22233 3666666666665542 3344444 35888899999988876553 34667889999999
Q ss_pred ccccee-------ecCCCCCCCCCCCEEeCCCCcccccCccch
Q 035895 292 HNRLQG-------SIPNSFDDLVSLESLDLSNNNLSEIIPLSL 327 (527)
Q Consensus 292 ~N~l~~-------~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 327 (527)
+|.+.+ .++..+..+++|+.||+++|++.+..+..+
T Consensus 262 ~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 262 YDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp HHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred cCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 998432 345678888999999999999887654433
No 118
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=4.7e-25 Score=222.65 Aligned_cols=249 Identities=18% Similarity=0.188 Sum_probs=199.2
Q ss_pred EEEcccCCCCcccChhHhhccccccEEEcccCccccccc----hhhcCCc-CCcEEEeecCcccccCcccccCC-----C
Q 035895 95 KLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGIS----EEIGNLT-DLISIDLGGNKLNGSISITLGKL-----Q 164 (527)
Q Consensus 95 ~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l-----~ 164 (527)
.++++.|.+++.+|..+. ..++|+.|+|++|.++...+ ..+..++ +|++|+|++|++++..+..+..+ +
T Consensus 2 ~~~ls~n~~~~~~~~~~~-~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTS-IPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp EEECCCCTTCCHHHHHHT-SCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccccchHHHHHHHh-CCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 468999999998777654 44579999999999998777 7888898 99999999999998777777765 9
Q ss_pred CCCEEeccCcccccccChhhhc----C-cccCeeeeecccCCCCCCcccc----C-CccCceeeCCCCCCCC-----Cch
Q 035895 165 KLQFLSFRGNELEGSIPNVLCH----L-AVLFQLDLRGNKLSGSIPTCFG----N-LTALRNLHLDSNELTS-----IPS 229 (527)
Q Consensus 165 ~L~~L~l~~N~l~~~~p~~~~~----l-~~L~~L~L~~N~l~~~~p~~~~----~-l~~L~~L~L~~N~l~~-----lp~ 229 (527)
+|+.|++++|.+++..+..+.. + ++|+.|++++|++++..+..+. . .++|++|+|++|.++. ++.
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999999777665444 4 8999999999999877765543 3 3699999999999984 455
Q ss_pred hhhCCC-CccEEEccCCcccccCCcccc----CC-CCCCEEEccCCCCCCC----Chhhhhc-CCCCCEEEcccccceee
Q 035895 230 ILWNLK-DILYLDFWSNLFVGPLPSKIG----NL-KVLTRIDFSRNNLLGD----IPTTIQG-LKSLQFLSLGHNRLQGS 298 (527)
Q Consensus 230 ~~~~l~-~L~~l~l~~n~~~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~L~~N~l~~~ 298 (527)
.+...+ +|++|++++|.+.+..+..+. .+ ++|++|+|++|.+.+. ++..+.. .++|++|+|++|++++.
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 556665 999999999999877765444 44 5999999999999863 4556666 45999999999999864
Q ss_pred cC----CCCCCCCCCCEEeCCCCcccccCcc-------chhhhccCCeeEeeeeeee
Q 035895 299 IP----NSFDDLVSLESLDLSNNNLSEIIPL-------SLEKLLYLNILLIVVVILA 344 (527)
Q Consensus 299 ~p----~~~~~l~~L~~L~ls~N~l~~~~p~-------~~~~l~~L~~L~~~~~~~~ 344 (527)
.+ ..+..+++|+.|++++|.+.++.+. .+..+..|+.|+++.+.+.
T Consensus 241 ~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 241 SLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp CHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred HHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 33 4567889999999999997665543 4556667777777766654
No 119
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=3.8e-25 Score=220.80 Aligned_cols=229 Identities=16% Similarity=0.226 Sum_probs=108.1
Q ss_pred CCCEEEcccCCCCcccChhHhhccccccEEEcccCccccc-cchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEe
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGG-ISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLS 170 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 170 (527)
.++.|++++|.+.+..+.. ..+ ++|+.|++++|.+++. ++..+..+++|++|++++|.+++..+..++.+++|+.|+
T Consensus 71 ~l~~L~l~~n~l~~~~~~~-~~~-~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAEH-FSP-FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TCSEEECTTCEECSCCCSC-CCC-BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred cceEEEcCCccccccchhh-ccC-CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 3444444444444433322 122 2344444444444433 344444455555555555555444444444555555555
Q ss_pred ccCc-cccc-ccChhhhcCcccCeeeeecc-cCCCC-CCccccCCc-cCceeeCCCC--CCC--CCchhhhCCCCccEEE
Q 035895 171 FRGN-ELEG-SIPNVLCHLAVLFQLDLRGN-KLSGS-IPTCFGNLT-ALRNLHLDSN--ELT--SIPSILWNLKDILYLD 241 (527)
Q Consensus 171 l~~N-~l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~L~~N--~l~--~lp~~~~~l~~L~~l~ 241 (527)
+++| .+++ .++..+..+++|+.|++++| .+++. ++..+..++ +|++|++++| .++ .+|..+..+++|+.|+
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 5555 3433 13444445555555555555 44432 234444555 5555555555 232 2444444455555555
Q ss_pred ccCCc-ccccCCccccCCCCCCEEEccCCCCCCCChh---hhhcCCCCCEEEcccccceeecCCCCCCCC-CCCEEeCCC
Q 035895 242 FWSNL-FVGPLPSKIGNLKVLTRIDFSRNNLLGDIPT---TIQGLKSLQFLSLGHNRLQGSIPNSFDDLV-SLESLDLSN 316 (527)
Q Consensus 242 l~~n~-~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~ls~ 316 (527)
+++|. +++..+..+..+++|++|++++|. +..+. .+..+++|++|++++| ++ ...+..+. .++.|++++
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~ 302 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINC 302 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESC
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEec
Confidence 55555 344444455555666666666654 12222 3555666666666655 21 11222221 244555566
Q ss_pred CcccccCccchh
Q 035895 317 NNLSEIIPLSLE 328 (527)
Q Consensus 317 N~l~~~~p~~~~ 328 (527)
|++++..|..+.
T Consensus 303 n~l~~~~~~~~~ 314 (336)
T 2ast_B 303 SHFTTIARPTIG 314 (336)
T ss_dssp CCSCCTTCSSCS
T ss_pred ccCccccCCccc
Confidence 666665555443
No 120
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.90 E-value=9.3e-24 Score=209.61 Aligned_cols=140 Identities=27% Similarity=0.407 Sum_probs=115.8
Q ss_pred hhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec----------------------------cCc----cceeEE
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS----------------------------CSN----EDFRAL 429 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~----------------------------~~~----~~~~~l 429 (527)
...++|++.+.||+|+||.||+|+.. ++.||||++... +.. ....++
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cchhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 34567999999999999999999876 789999997421 011 123589
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCC----------CeEecCCCCCCeeeCCCCcEEEee
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYST----------PIIHCDLKPHNKLLDDNIVAHLSD 499 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~----------~iiHrdlk~~nill~~~~~~kl~D 499 (527)
||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999999764 4789999999999999999999 77 999999999999999999999999
Q ss_pred cccccccCCCCCccceeccccccccccC
Q 035895 500 FGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 500 fg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
||+|+...............||+.|+||
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aP 202 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAP 202 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCH
T ss_pred CCcccccccccCccccccCccCccccCH
Confidence 9999877544332233345689999998
No 121
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.90 E-value=9e-24 Score=213.58 Aligned_cols=139 Identities=32% Similarity=0.425 Sum_probs=115.3
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec---------------------------------cCccceeE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS---------------------------------CSNEDFRA 428 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~---------------------------------~~~~~~~~ 428 (527)
..++|++.+.||+|+||.||+|+.+ +++.||||+++.. +..++..+
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 3467999999999999999999875 5889999987421 12334668
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
+||||++||+|.+++...+ .++...+..++.+|+.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 116 lv~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 9999999999999997643 5778888899999999999999 99999999999999999999999999999986432
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... .....+||+.||||
T Consensus 192 ~~~--~~~~~~gt~~y~aP 208 (373)
T 2r5t_A 192 HNS--TTSTFCGTPEYLAP 208 (373)
T ss_dssp CCC--CCCSBSCCCCCCCH
T ss_pred CCC--ccccccCCccccCH
Confidence 221 22345789999998
No 122
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.90 E-value=1.3e-23 Score=208.02 Aligned_cols=135 Identities=33% Similarity=0.438 Sum_probs=115.6
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------cCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------CSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------~~~~~~~~lv 430 (527)
.++|++.+.||+|+||.||+|+.. +|+.||+|++... +..++..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467999999999999999999864 7899999997521 2234567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||++||+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred EeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 9999999999999764 35788888999999999999999 999999999999999999999999999999876432
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
....+||+.||||
T Consensus 160 ----~~~~~gt~~y~aP 172 (318)
T 1fot_A 160 ----TYTLCGTPDYIAP 172 (318)
T ss_dssp ----BCCCCSCTTTCCH
T ss_pred ----cccccCCccccCH
Confidence 1235689999998
No 123
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.90 E-value=1e-23 Score=211.03 Aligned_cols=140 Identities=28% Similarity=0.378 Sum_probs=111.6
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec------------------------------cCccceeEEEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS------------------------------CSNEDFRALVL 431 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~------------------------------~~~~~~~~lv~ 431 (527)
..+.|++.+.||+|+||+||+|+. .+|+.||||++... +...+..++||
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357799999999999999999985 67899999997431 22345678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
|||++|+|.+++...+ .+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+|+.......
T Consensus 88 E~~~gg~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 88 EYCPGGELFDYIISQD-RLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp ECCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 9999999999987543 5788899999999999999999 89999999999999999999999999999987643322
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
. .....+||++|+||
T Consensus 164 ~-~~~~~~gt~~y~aP 178 (347)
T 3zgw_A 164 Y-HLQTCCGSLAYAAP 178 (347)
T ss_dssp ---------CGGGCCH
T ss_pred c-cccccCCccCccCH
Confidence 1 22345689999998
No 124
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.90 E-value=1.8e-23 Score=206.24 Aligned_cols=141 Identities=27% Similarity=0.440 Sum_probs=116.3
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee-----------------------------ccCccceeEEEEEe
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF-----------------------------SCSNEDFRALVLEY 433 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~-----------------------------~~~~~~~~~lv~ey 433 (527)
.++|++.+.||+|+||+||+|+. .+++.||+|++.. .+..++..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 46789999999999999999986 4689999998632 12334567899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~ 513 (527)
+++|+|.+++......+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999999999876677899999999999999999999 9999999999999999999999999999998764332111
Q ss_pred c------------eeccccccccccC
Q 035895 514 T------------QTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~------------~~~~~~t~~y~aP 527 (527)
. .....||++|+||
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aP 191 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAP 191 (310)
T ss_dssp --------------CCCCSCGGGCCH
T ss_pred cccccccccccccccccCCCcceeCH
Confidence 0 1134689999998
No 125
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.90 E-value=1.9e-23 Score=204.88 Aligned_cols=137 Identities=31% Similarity=0.449 Sum_probs=116.1
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-----------------------------cCccceeEEEEEe
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-----------------------------CSNEDFRALVLEY 433 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-----------------------------~~~~~~~~lv~ey 433 (527)
.+.|++.+.||+|+||.||+|+. .+++.||||++... +..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35799999999999999999985 67899999997531 2234567899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~ 513 (527)
+++|+|.+++... .+++.+...++.+++.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 9999999999754 5788899999999999999999 89999999999999999999999999999987654322
Q ss_pred ceeccccccccccC
Q 035895 514 TQTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~~~~~~~t~~y~aP 527 (527)
......||+.|+||
T Consensus 172 ~~~~~~gt~~y~aP 185 (297)
T 3fxz_A 172 KRSTMVGTPYWMAP 185 (297)
T ss_dssp CBCCCCSCGGGCCH
T ss_pred ccCCccCCcCccCh
Confidence 22345689999998
No 126
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.90 E-value=1.2e-23 Score=210.61 Aligned_cols=138 Identities=30% Similarity=0.372 Sum_probs=115.8
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec---------------------------------cCccceeEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS---------------------------------CSNEDFRAL 429 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~---------------------------------~~~~~~~~l 429 (527)
.++|++.+.||+|+||.||+|+.. +++.||||++... +..++..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 467999999999999999999964 6899999998531 123456789
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||++||+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+.....
T Consensus 88 v~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp EECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999998754 35788899999999999999999 999999999999999999999999999999864322
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
.. .....+||+.|+||
T Consensus 164 ~~--~~~~~~gt~~y~aP 179 (345)
T 3a8x_A 164 GD--TTSTFCGTPNYIAP 179 (345)
T ss_dssp TC--CBCCCCSCGGGCCH
T ss_pred CC--cccccCCCccccCc
Confidence 21 22345789999998
No 127
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.90 E-value=7.4e-24 Score=215.04 Aligned_cols=142 Identities=26% Similarity=0.412 Sum_probs=116.7
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee------------------------------ccCccceeEEEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF------------------------------SCSNEDFRALVL 431 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~------------------------------~~~~~~~~~lv~ 431 (527)
..++|++.+.||+|+||.||+|+.. +++.||||+++. .+..++..++||
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 3467889999999999999999975 789999998742 123345678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
||+++|+|.+++...+..+++.+...++.|++.||+||| +++|+||||||+||++++++.+||+|||+|+.......
T Consensus 192 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~ 268 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVY 268 (377)
T ss_dssp ECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEE
T ss_pred EcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCce
Confidence 999999999999876667899999999999999999999 99999999999999999999999999999987543211
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
........+++.|+||
T Consensus 269 ~~~~~~~~~~~~y~aP 284 (377)
T 3cbl_A 269 AASGGLRQVPVKWTAP 284 (377)
T ss_dssp ECCSSCCEEEGGGSCH
T ss_pred eecCCCCCCCcCcCCH
Confidence 1111122357789998
No 128
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.90 E-value=2.2e-23 Score=208.07 Aligned_cols=139 Identities=37% Similarity=0.564 Sum_probs=112.8
Q ss_pred hcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec---------------------------------cCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS---------------------------------CSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~---------------------------------~~~~~~~~l 429 (527)
..++|++.+.||+|+||.||+|+. +++.||||++... .......++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 457899999999999999999976 6789999997421 111224579
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCC---------CeEecCCCCCCeeeCCCCcEEEeec
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYST---------PIIHCDLKPHNKLLDDNIVAHLSDF 500 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~---------~iiHrdlk~~nill~~~~~~kl~Df 500 (527)
||||+++|+|.+++.... .++.....++.|++.||+||| +. +|+||||||+||+++.++.+||+||
T Consensus 90 v~e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DF 164 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDF 164 (336)
T ss_dssp EECCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCC
T ss_pred EEecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeec
Confidence 999999999999997543 478888999999999999999 77 9999999999999999999999999
Q ss_pred ccccccCCCCC------ccceeccccccccccC
Q 035895 501 GIAKLLTGEDQ------SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 501 g~a~~~~~~~~------~~~~~~~~~t~~y~aP 527 (527)
|+|+.+..... ........||+.|+||
T Consensus 165 G~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (336)
T 3g2f_A 165 GLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197 (336)
T ss_dssp TTCEECSSSSCC---------CCTTSCGGGCCH
T ss_pred cceeecccccccCccccccccccCCCccceeCc
Confidence 99987653221 1112234689999998
No 129
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.90 E-value=1.7e-23 Score=227.39 Aligned_cols=140 Identities=24% Similarity=0.321 Sum_probs=117.2
Q ss_pred hhcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee---------------------------------ccCcccee
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF---------------------------------SCSNEDFR 427 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~---------------------------------~~~~~~~~ 427 (527)
...++|++.++||+|+||.||+|+.. +++.||||++.. .....+..
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~ 417 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRL 417 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEE
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEE
Confidence 34678999999999999999999864 688999999752 12234567
Q ss_pred EEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
++||||++||+|.+++...+ .+++..+..|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+...
T Consensus 418 ~lV~E~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 418 YFVMEYVNGGDLMYHIQQVG-RFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEECCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEeCcCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 89999999999999997653 5788899999999999999999 9999999999999999999999999999998643
Q ss_pred CCCCccceeccccccccccC
Q 035895 508 GEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~~~~~~~~t~~y~aP 527 (527)
.... .....+||++||||
T Consensus 494 ~~~~--~~~~~~GT~~Y~AP 511 (674)
T 3pfq_A 494 WDGV--TTKTFCGTPDYIAP 511 (674)
T ss_dssp CTTC--CBCCCCSCSSSCCH
T ss_pred cCCc--ccccccCCCcccCH
Confidence 2221 22346799999998
No 130
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.89 E-value=1.4e-23 Score=212.68 Aligned_cols=137 Identities=31% Similarity=0.439 Sum_probs=116.7
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee--------------------------------ccCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF--------------------------------SCSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~--------------------------------~~~~~~~~~lv 430 (527)
.++|++.+.||+|+||.||+|+. .+++.||+|++.. .+..++..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 46799999999999999999986 4688999998742 12344567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||++||+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.+....
T Consensus 94 ~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 169 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169 (384)
T ss_dssp ECCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC
Confidence 9999999999999754 45788899999999999999999 9999999999999999999999999999999775332
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
.....+||++||||
T Consensus 170 ---~~~~~~gt~~Y~aP 183 (384)
T 4fr4_A 170 ---QITTMAGTKPYMAP 183 (384)
T ss_dssp ---CBCCCCSCGGGCCG
T ss_pred ---ceeccCCCccccCC
Confidence 22345789999998
No 131
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.89 E-value=1.7e-23 Score=207.99 Aligned_cols=141 Identities=29% Similarity=0.493 Sum_probs=114.0
Q ss_pred cCCccccceeccCCceEEEEEEcc----CCcEEEEEEEeec------------------------------cCccceeEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFS------------------------------CSNEDFRAL 429 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~------------------------------~~~~~~~~l 429 (527)
.+.|++.+.||+|+||.||+|+.. .+..||||++... +...+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 356889999999999999999874 3456999997531 233456789
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++......+++.++..++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999999999876667899999999999999999999 999999999999999999999999999999987543
Q ss_pred CCc-cceeccccccccccC
Q 035895 510 DQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~-~~~~~~~~t~~y~aP 527 (527)
... .......+|+.|+||
T Consensus 205 ~~~~~~~~~~~~t~~y~aP 223 (325)
T 3kul_A 205 PDAAYTTTGGKIPIRWTAP 223 (325)
T ss_dssp --CCEECC---CCGGGSCH
T ss_pred ccceeeccCCCCcccccCH
Confidence 221 222234467789998
No 132
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.89 E-value=1.8e-23 Score=209.85 Aligned_cols=135 Identities=28% Similarity=0.413 Sum_probs=115.7
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee--------------------------------ccCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF--------------------------------SCSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~--------------------------------~~~~~~~~~lv 430 (527)
.++|++.+.||+|+||.||+|+.. +|+.||||++.. .+..++..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 467999999999999999999864 689999999742 12234567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||++||+|.+++...+ .++...+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~gg~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~ 195 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIG-RFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT 195 (350)
T ss_dssp EECCTTCBHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCCc
Confidence 99999999999997643 5788889999999999999999 9999999999999999999999999999999764321
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
...+||+.|+||
T Consensus 196 -----~~~~gt~~y~aP 207 (350)
T 1rdq_E 196 -----WTLCGTPEALAP 207 (350)
T ss_dssp -----CCCEECGGGCCH
T ss_pred -----ccccCCccccCH
Confidence 235689999998
No 133
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.89 E-value=7.2e-24 Score=210.47 Aligned_cols=140 Identities=24% Similarity=0.396 Sum_probs=116.8
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee------------------------------ccCccceeEEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF------------------------------SCSNEDFRALVLE 432 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~------------------------------~~~~~~~~~lv~e 432 (527)
.++|++.+.||+|+||+||+|+.. +++.||||++.. .+..++..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 478999999999999999999865 789999998742 1223456789999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~ 512 (527)
|+++|+|.+++... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+......
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred cCCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 99999999988643 45789999999999999999999 999999999999999999999999999999876433222
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
.......||+.|+||
T Consensus 162 ~~~~~~~gt~~y~aP 176 (323)
T 3tki_A 162 RLLNKMCGTLPYVAP 176 (323)
T ss_dssp CCBCSCCSCGGGSCH
T ss_pred cccCCCccCcCccCc
Confidence 222345689999998
No 134
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.89 E-value=2.4e-23 Score=206.50 Aligned_cols=148 Identities=25% Similarity=0.330 Sum_probs=120.4
Q ss_pred ccccHHHHhhhcCC----------ccccceeccCCceEEEEEEcc-CCcEEEEEEEeec---------------------
Q 035895 373 RRFSYQELLRATDG----------FSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------- 420 (527)
Q Consensus 373 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------- 420 (527)
..++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++...
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45666666655543 677789999999999999975 7999999997531
Q ss_pred --------cCccceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC
Q 035895 421 --------CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDN 492 (527)
Q Consensus 421 --------~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~ 492 (527)
+...+..++||||+++|+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTT
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCC
Confidence 2234567899999999999999854 35889999999999999999999 8999999999999999999
Q ss_pred CcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 493 IVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 493 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+.+||+|||+++....... ......||++|+||
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aP 210 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAP 210 (321)
T ss_dssp CCEEECCCTTCEECCSSSC--CBCCCCSCGGGCCH
T ss_pred CcEEEeeeeeeeecccCcc--ccccccCCccccCH
Confidence 9999999999987654321 22345689999998
No 135
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.6e-24 Score=220.74 Aligned_cols=243 Identities=17% Similarity=0.191 Sum_probs=172.8
Q ss_pred CchhhhcCCCCCEEEccccccccccccccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCC---CCcccChhH-
Q 035895 36 VSITIFNLSTLKVFDVDNNYVLGRLSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNP---LDGFLPRVV- 111 (527)
Q Consensus 36 ~~~~~~~l~~L~~L~Ls~N~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~~~~~- 111 (527)
.+.++..+++|+.|+|++|.+....+..+ ...+..+++|++|+|++|. +++.+|..+
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l-------------------~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~ 84 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWL-------------------SENIASKKDLEIAEFSDIFTGRVKDEIPEALR 84 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHH-------------------HHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHH-------------------HHHHHhCCCccEEeCcccccCccccchhHHHH
Confidence 34566777888888888886654322110 1135566778888887753 334444444
Q ss_pred ------hhccccccEEEcccCcccc----ccchhhcCCcCCcEEEeecCcccccCccccc----CC---------CCCCE
Q 035895 112 ------GNFSQSLEFIWMSDCNISG----GISEEIGNLTDLISIDLGGNKLNGSISITLG----KL---------QKLQF 168 (527)
Q Consensus 112 ------~~~~~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l---------~~L~~ 168 (527)
..+ ++|++|+|++|.++. .+|..+..+++|++|+|++|.++...+..+. .+ ++|+.
T Consensus 85 ~l~~~l~~~-~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~ 163 (386)
T 2ca6_A 85 LLLQALLKC-PKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRS 163 (386)
T ss_dssp HHHHHHTTC-TTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCE
T ss_pred HHHHHHhhC-CcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcE
Confidence 333 468888888888776 4666777788888888888887644333333 33 78888
Q ss_pred EeccCcccc-cccC---hhhhcCcccCeeeeecccCCC-----CCCccccCCccCceeeCCCCCC-----CCCchhhhCC
Q 035895 169 LSFRGNELE-GSIP---NVLCHLAVLFQLDLRGNKLSG-----SIPTCFGNLTALRNLHLDSNEL-----TSIPSILWNL 234 (527)
Q Consensus 169 L~l~~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~L~~N~l-----~~lp~~~~~l 234 (527)
|++++|+++ +.+| ..+..+++|+.|++++|+++. ..|..+..+++|++|+|++|.+ ..+|..+..+
T Consensus 164 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~ 243 (386)
T 2ca6_A 164 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSW 243 (386)
T ss_dssp EECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGC
T ss_pred EECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccC
Confidence 888888886 3344 456678888888888888862 3444778888888888888888 3467777888
Q ss_pred CCccEEEccCCccccc----CCccc--cCCCCCCEEEccCCCCCC----CChhhh-hcCCCCCEEEcccccceee
Q 035895 235 KDILYLDFWSNLFVGP----LPSKI--GNLKVLTRIDFSRNNLLG----DIPTTI-QGLKSLQFLSLGHNRLQGS 298 (527)
Q Consensus 235 ~~L~~l~l~~n~~~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~L~~N~l~~~ 298 (527)
++|+.|++++|.+.+. +|..+ +.+++|++|+|++|.+.+ .+|..+ .++++|++|++++|++++.
T Consensus 244 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 244 PNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp TTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred CCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 8888888888887755 45566 348999999999999987 477777 6789999999999998754
No 136
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=8.5e-23 Score=201.25 Aligned_cols=194 Identities=19% Similarity=0.269 Sum_probs=152.2
Q ss_pred CCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCC
Q 035895 88 SNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQ 167 (527)
Q Consensus 88 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 167 (527)
..+++|++|++++|.++.+ | .+..+ ++|+.|++++|.+++..+ +..+++|++|++++|++++. ..+..+++|+
T Consensus 38 ~~l~~L~~L~l~~~~i~~l-~-~~~~l-~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTI-E-GVQYL-NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHTCCEEECTTSCCCCC-T-TGGGC-TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHcCCcCEEEeeCCCccCc-h-hhhcc-CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 4567788888888887753 3 35554 368888888888876544 77888888888888888754 2577888888
Q ss_pred EEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcc
Q 035895 168 FLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLF 247 (527)
Q Consensus 168 ~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~ 247 (527)
.|++++|.+++. +. +..+++|+.|++++|++++..+ +..+++|+.|++++|+++.++. +..+++|+.|++++|.+
T Consensus 111 ~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 111 TLDLTSTQITDV-TP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EEECTTSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCC
T ss_pred EEECCCCCCCCc-hh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCcc
Confidence 888888888753 33 7888888888888888876544 7788888888888888888776 77788888888888888
Q ss_pred cccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEccccccee
Q 035895 248 VGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQG 297 (527)
Q Consensus 248 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 297 (527)
.+..+ +..+++|++|++++|++.+.. .+..+++|+.|++++|++++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 76543 788999999999999998654 38999999999999999974
No 137
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.4e-22 Score=193.67 Aligned_cols=178 Identities=25% Similarity=0.285 Sum_probs=117.2
Q ss_pred CCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEec
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSF 171 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 171 (527)
..++++++++.++. +|..+ ..+++.|+|++|.+++..+..|..+++|++|+|++|++++..+..|..+++|+.|++
T Consensus 15 ~~~~l~~~~~~l~~-~p~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 15 GKKEVDCQGKSLDS-VPSGI---PADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGTEEECTTCCCSS-CCSCC---CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCeEEecCCCCccc-cCCCC---CCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 45666777776664 33332 235777777777777766777777777777777777777777777777777888888
Q ss_pred cCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCch-hhhCCCCccEEEccCCccccc
Q 035895 172 RGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS-ILWNLKDILYLDFWSNLFVGP 250 (527)
Q Consensus 172 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~l~l~~n~~~~~ 250 (527)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|++|+|++|+++.+|. .+..+++|+.|++++|.+.+.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 8777776666777777888888888888877777777778888888888887777654 233344444444444444433
Q ss_pred CCccccCCCCCCEEEccCCCCCC
Q 035895 251 LPSKIGNLKVLTRIDFSRNNLLG 273 (527)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~N~l~~ 273 (527)
.+..+..+++|++|++++|.+..
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~c 193 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFDC 193 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBCT
T ss_pred CHHHHhCCCCCCEEEeeCCceeC
Confidence 33444445555555555555543
No 138
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.89 E-value=2.1e-23 Score=220.44 Aligned_cols=139 Identities=29% Similarity=0.454 Sum_probs=117.9
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee--------------------------------ccCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF--------------------------------SCSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~--------------------------------~~~~~~~~~l 429 (527)
..++|++.++||+|+||.||+|+.. +|+.||||++.. .+..++..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 3467999999999999999999864 799999999742 1234456789
Q ss_pred EEEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 430 VLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
||||++||+|.+++...+ ..+++..+..++.||+.||+||| +++||||||||+|||++.++.+||+|||+|+....
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 999999999999997653 34889999999999999999999 89999999999999999999999999999987753
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
.. .....+||++||||
T Consensus 339 ~~---~~~~~~GT~~Y~AP 354 (576)
T 2acx_A 339 GQ---TIKGRVGTVGYMAP 354 (576)
T ss_dssp TC---CEECCCSCGGGCCH
T ss_pred Cc---cccccCCCccccCH
Confidence 32 22345789999998
No 139
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.4e-23 Score=207.15 Aligned_cols=222 Identities=16% Similarity=0.134 Sum_probs=183.3
Q ss_pred cccEEEcccCccccccc---hhhcCCcCCcEEEeecCcccccCcccc--cCCCCCCEEeccCcccccccC----hhhhcC
Q 035895 117 SLEFIWMSDCNISGGIS---EEIGNLTDLISIDLGGNKLNGSISITL--GKLQKLQFLSFRGNELEGSIP----NVLCHL 187 (527)
Q Consensus 117 ~L~~L~Ls~n~l~~~~~---~~~~~l~~L~~L~L~~N~l~~~~~~~~--~~l~~L~~L~l~~N~l~~~~p----~~~~~l 187 (527)
.++.+.+.++.++...- ..+..+++|++|++++|.+++..|..+ ..+++|+.|++++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 47888888887753211 112345679999999999999888888 899999999999999997655 345679
Q ss_pred cccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCC---Cchh--hhCCCCccEEEccCCcccccC--Cc-cccCCC
Q 035895 188 AVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTS---IPSI--LWNLKDILYLDFWSNLFVGPL--PS-KIGNLK 259 (527)
Q Consensus 188 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~---lp~~--~~~l~~L~~l~l~~n~~~~~~--p~-~~~~l~ 259 (527)
++|++|++++|++.+..|..|+.+++|++|+|++|++.+ ++.. +..+++|++|++++|.+.... +. .++.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999875 4333 357899999999999986321 11 357889
Q ss_pred CCCEEEccCCCCCCCChhhhhcC---CCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCee
Q 035895 260 VLTRIDFSRNNLLGDIPTTIQGL---KSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNIL 336 (527)
Q Consensus 260 ~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 336 (527)
+|++|+|++|++.+..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|+++++ |. +..++.|+.|
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L 299 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNL 299 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEE
Confidence 99999999999998888887776 69999999999999 6677764 7999999999999986 33 6778889999
Q ss_pred Eeeeeee
Q 035895 337 LIVVVIL 343 (527)
Q Consensus 337 ~~~~~~~ 343 (527)
+++.+.+
T Consensus 300 ~L~~N~l 306 (310)
T 4glp_A 300 TLDGNPF 306 (310)
T ss_dssp ECSSTTT
T ss_pred ECcCCCC
Confidence 8877654
No 140
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.89 E-value=2.5e-23 Score=200.67 Aligned_cols=141 Identities=28% Similarity=0.430 Sum_probs=119.1
Q ss_pred hcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec----------------------------cCccceeEEEEEec
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~----------------------------~~~~~~~~lv~ey~ 434 (527)
..++|++.+.||+|+||.||+|+.+++..||+|++... +..++..++||||+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 34679999999999999999999988889999997531 23445678999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccc
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMT 514 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 514 (527)
++|+|.+++...+..+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~ 161 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VS 161 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-EE
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-hc
Confidence 999999999876666899999999999999999999 89999999999999999999999999999987654321 22
Q ss_pred eeccccccccccC
Q 035895 515 QTQTLAIIGYMAP 527 (527)
Q Consensus 515 ~~~~~~t~~y~aP 527 (527)
.....+|+.|+||
T Consensus 162 ~~~~~~~~~y~aP 174 (268)
T 3sxs_A 162 SVGTKFPVKWSAP 174 (268)
T ss_dssp CCSCCCCGGGCCH
T ss_pred ccCCCcCcccCCH
Confidence 2334467789998
No 141
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.89 E-value=1.2e-23 Score=211.86 Aligned_cols=150 Identities=24% Similarity=0.401 Sum_probs=120.6
Q ss_pred ccHHHHhhhcCCccccceeccCCceEEEEEEc------cCCcEEEEEEEeec----------------------------
Q 035895 375 FSYQELLRATDGFSANNLIGRGSFGSVYKARL------QDGMEFAIKVFHFS---------------------------- 420 (527)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~---------------------------- 420 (527)
+....+....+.|++.+.||+|+||.||+|++ .+++.||||++...
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44556666778899999999999999999973 35689999997431
Q ss_pred ---cCc-cceeEEEEEeccCCcHHHHHHhcCC------------------------------------------------
Q 035895 421 ---CSN-EDFRALVLEYTTNGSLEKVLYSSNY------------------------------------------------ 448 (527)
Q Consensus 421 ---~~~-~~~~~lv~ey~~~g~L~~~l~~~~~------------------------------------------------ 448 (527)
+.. ....++|||||++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 112 2347899999999999999976432
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 449 -----------------ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 449 -----------------~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
.+++.....++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 1788889999999999999999 99999999999999999999999999999987654433
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
........+|++||||
T Consensus 249 ~~~~~~~~~t~~y~aP 264 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAP 264 (359)
T ss_dssp CEEC--CEECGGGCCH
T ss_pred chhccccCCCceeECh
Confidence 3333445678899998
No 142
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.89 E-value=3.5e-23 Score=204.39 Aligned_cols=138 Identities=28% Similarity=0.417 Sum_probs=115.5
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeec-------------------------------cCccceeEEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS-------------------------------CSNEDFRALVLE 432 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~-------------------------------~~~~~~~~lv~e 432 (527)
.+.|++.+.||+|+||+||+|+..+|+.||+|++... +..++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 4679999999999999999999988999999987421 233456789999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~ 512 (527)
|+++ +|.+.+......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 174 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR- 174 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc-
Confidence 9985 888888776667899999999999999999999 99999999999999999999999999999987643222
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
..+...+|++|+||
T Consensus 175 -~~~~~~~t~~y~aP 188 (311)
T 3niz_A 175 -SYTHEVVTLWYRAP 188 (311)
T ss_dssp ----CCCCCCTTCCH
T ss_pred -cccCCcccCCcCCH
Confidence 22334678999998
No 143
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.89 E-value=8.3e-23 Score=201.12 Aligned_cols=152 Identities=33% Similarity=0.482 Sum_probs=125.7
Q ss_pred cccccHHHHhhhcCCcccc------ceeccCCceEEEEEEccCCcEEEEEEEeec-------------------------
Q 035895 372 RRRFSYQELLRATDGFSAN------NLIGRGSFGSVYKARLQDGMEFAIKVFHFS------------------------- 420 (527)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~vy~~~~~~~~~vavK~~~~~------------------------- 420 (527)
...+++.++..++..|... +.||+|+||.||+|+. +++.||||++...
T Consensus 12 ~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 3567888999999888776 8999999999999997 5789999987431
Q ss_pred --------cCccceeEEEEEeccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC
Q 035895 421 --------CSNEDFRALVLEYTTNGSLEKVLYSS--NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD 490 (527)
Q Consensus 421 --------~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~ 490 (527)
+...+..++||||+++|+|.+++... ...+++..+..++.+++.||+||| +++|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEc
Confidence 12334568999999999999998743 245889999999999999999999 89999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 491 DNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 491 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+++.+|++|||+++...............||+.|+||
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aP 204 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAP 204 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCH
T ss_pred CCCcEEEeecccccccccccccccccccCCCcCcCCh
Confidence 9999999999999876543322223345689999998
No 144
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=4.1e-23 Score=204.77 Aligned_cols=138 Identities=22% Similarity=0.357 Sum_probs=117.2
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee----------------------------ccCccceeEEEEEec
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF----------------------------SCSNEDFRALVLEYT 434 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~----------------------------~~~~~~~~~lv~ey~ 434 (527)
.+.|++.+.||+|+||.||+|+.. +++.||+|++.. .+...+..++|||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 467999999999999999999864 688999998742 123345778999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC--CCcEEEeecccccccCCCCCc
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD--NIVAHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~--~~~~kl~Dfg~a~~~~~~~~~ 512 (527)
+||+|.+++...+..+++.++..++.|++.||+||| +++|+||||||+||+++. ++.+|++|||+++......
T Consensus 84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~-- 158 (321)
T 1tki_A 84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD-- 158 (321)
T ss_dssp CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC--
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC--
Confidence 999999999766667899999999999999999999 999999999999999986 7899999999999875432
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
......+|++|+||
T Consensus 159 -~~~~~~gt~~y~aP 172 (321)
T 1tki_A 159 -NFRLLFTAPEYYAP 172 (321)
T ss_dssp -EEEEEESCGGGSCH
T ss_pred -ccccccCChhhcCc
Confidence 22335688999998
No 145
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.89 E-value=2e-23 Score=201.60 Aligned_cols=140 Identities=26% Similarity=0.405 Sum_probs=117.9
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEee----------------------------ccCccceeEEEEEecc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHF----------------------------SCSNEDFRALVLEYTT 435 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~----------------------------~~~~~~~~~lv~ey~~ 435 (527)
.++|++.+.||+|+||.||+|+..+++.||+|++.. .+..++..++||||++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 467899999999999999999998889999999753 1234456789999999
Q ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccce
Q 035895 436 NGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515 (527)
Q Consensus 436 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 515 (527)
+|+|.+++......+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+|++|||+++...... ....
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~ 164 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSS 164 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHST
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-cccc
Confidence 99999999876667899999999999999999999 9999999999999999999999999999998764321 1122
Q ss_pred eccccccccccC
Q 035895 516 TQTLAIIGYMAP 527 (527)
Q Consensus 516 ~~~~~t~~y~aP 527 (527)
....+|+.|+||
T Consensus 165 ~~~~~~~~y~aP 176 (269)
T 4hcu_A 165 TGTKFPVKWASP 176 (269)
T ss_dssp TSTTCCGGGCCH
T ss_pred cCcccccccCCH
Confidence 234467789998
No 146
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.89 E-value=2.4e-23 Score=209.55 Aligned_cols=139 Identities=29% Similarity=0.422 Sum_probs=115.6
Q ss_pred cCCccccceeccCCceEEEEEEc----cCCcEEEEEEEeec----------------------------------cCccc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL----QDGMEFAIKVFHFS----------------------------------CSNED 425 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~----------------------------------~~~~~ 425 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++... +..++
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46799999999999999999986 47899999987421 11234
Q ss_pred eeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 426 FRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 426 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
..++||||+++|+|.+++...+ .+++.+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRE-RFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 5679999999999999997643 5788889999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCccceeccccccccccC
Q 035895 506 LTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 506 ~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+..... .......||++|+||
T Consensus 209 ~~~~~~-~~~~~~~gt~~y~aP 229 (355)
T 1vzo_A 209 FVADET-ERAYDFCGTIEYMAP 229 (355)
T ss_dssp CCGGGG-GGGCGGGSCCTTCCH
T ss_pred cccCCC-CcccCcccCcCccCh
Confidence 643221 122345689999998
No 147
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.89 E-value=3.8e-23 Score=202.83 Aligned_cols=141 Identities=26% Similarity=0.420 Sum_probs=114.5
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeec--------------------------------cCccceeEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS--------------------------------CSNEDFRALVL 431 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~--------------------------------~~~~~~~~lv~ 431 (527)
.++|++.+.||+|+||.||+|+. +++.||||++... .......++||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~ 85 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLIT 85 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEeh
Confidence 46799999999999999999987 6889999997421 01123467999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG-----YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~-----~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
||+++|+|.+++.. ..+++..+..++.|++.||+|||.. ++++|+||||||+||+++.++.+||+|||+|+..
T Consensus 86 e~~~~g~L~~~l~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 163 (301)
T 3q4u_A 86 HYHEMGSLYDYLQL--TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163 (301)
T ss_dssp CCCTTCBHHHHHTT--CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred hhccCCCHHHHHhh--cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence 99999999999954 4588999999999999999999932 2679999999999999999999999999999876
Q ss_pred CCCCCcc--ceeccccccccccC
Q 035895 507 TGEDQSM--TQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~--~~~~~~~t~~y~aP 527 (527)
....... ......||++|+||
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aP 186 (301)
T 3q4u_A 164 SQSTNQLDVGNNPRVGTKRYMAP 186 (301)
T ss_dssp ETTTTEEECCCCCCCCCGGGCCH
T ss_pred ccccccccccccccccccceeCh
Confidence 5432211 12234689999998
No 148
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.89 E-value=2.3e-23 Score=216.20 Aligned_cols=139 Identities=27% Similarity=0.404 Sum_probs=114.8
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec--------------------------------cCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS--------------------------------CSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~--------------------------------~~~~~~~~l 429 (527)
..++|++.+.||+|+||.||+|+. .+|+.||||++... +...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 346799999999999999999985 57899999987521 223456689
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYS-TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~-~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
||||+++|+|.+++... ..+++..+..++.|++.||+||| + ++||||||||+|||++.++.+||+|||+|+....
T Consensus 226 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 99999999999998754 35788899999999999999999 7 8999999999999999999999999999986433
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... .....+||++||||
T Consensus 302 ~~~--~~~~~~gt~~y~aP 318 (446)
T 4ejn_A 302 DGA--TMKTFCGTPEYLAP 318 (446)
T ss_dssp -------CCSSSCGGGCCH
T ss_pred CCc--ccccccCCccccCH
Confidence 221 22346789999998
No 149
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.89 E-value=1.8e-23 Score=211.72 Aligned_cols=141 Identities=27% Similarity=0.515 Sum_probs=105.5
Q ss_pred cCCccccceeccCCceEEEEEEcc----CCcEEEEEEEee------------------------------ccCccceeEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHF------------------------------SCSNEDFRAL 429 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~------------------------------~~~~~~~~~l 429 (527)
.++|++.+.||+|+||.||+|+.. ++..||||+++. .+...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 356899999999999999999864 577899998742 1233456789
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++...+..+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999877667899999999999999999999 899999999999999999999999999999877533
Q ss_pred CCc-cceeccccccccccC
Q 035895 510 DQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~-~~~~~~~~t~~y~aP 527 (527)
... .......++++|+||
T Consensus 201 ~~~~~~~~~~~~~~~y~aP 219 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSP 219 (373)
T ss_dssp -------------CTTSCH
T ss_pred CccceeccCCCcCCCccCh
Confidence 211 111223356789998
No 150
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.89 E-value=3.6e-23 Score=202.64 Aligned_cols=138 Identities=27% Similarity=0.442 Sum_probs=110.8
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEee--------------------------------ccCccceeEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF--------------------------------SCSNEDFRALVL 431 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~--------------------------------~~~~~~~~~lv~ 431 (527)
+.|++.+.||+|+||.||+|+. .+++.||+|++.. .+..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 5699999999999999999985 5689999998742 122345678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
||++||+|.+++...+ .+++..+..++.|++.||+|+| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 91 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG-PLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp ECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 9999999999997653 5788999999999999999999 99999999999999999999999999999987653321
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
.......||+.|+||
T Consensus 167 -~~~~~~~gt~~y~aP 181 (294)
T 4eqm_A 167 -TQTNHVLGTVQYFSP 181 (294)
T ss_dssp ---------CCSSCCH
T ss_pred -cccCccccCccccCH
Confidence 122235689999998
No 151
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.89 E-value=4.1e-23 Score=217.60 Aligned_cols=139 Identities=29% Similarity=0.434 Sum_probs=117.3
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee--------------------------------ccCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF--------------------------------SCSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~--------------------------------~~~~~~~~~lv 430 (527)
.++|+..++||+|+||.||+|+.. +|+.||||++.. .+...+..++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 467999999999999999999974 699999999842 12234567899
Q ss_pred EEeccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 431 LEYTTNGSLEKVLYSSN---YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
|||++||+|.+++.... ..+++..+..++.||+.||+||| +++|+||||||+||+++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999987642 35888899999999999999999 9999999999999999999999999999998765
Q ss_pred CCCCccceeccccccccccC
Q 035895 508 GEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~~~~~~~~t~~y~aP 527 (527)
.... .....+||+.||||
T Consensus 341 ~~~~--~~~~~~GT~~Y~AP 358 (543)
T 3c4z_A 341 AGQT--KTKGYAGTPGFMAP 358 (543)
T ss_dssp TTCC--CBCCCCSCTTTSCH
T ss_pred CCCc--ccccccCCccccCh
Confidence 3321 12235789999998
No 152
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.89 E-value=4e-23 Score=205.71 Aligned_cols=140 Identities=26% Similarity=0.354 Sum_probs=115.5
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec----------------------------cCccceeEEEEEec
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~----------------------------~~~~~~~~lv~ey~ 434 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++... +...+..++||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 36799999999999999999985 67899999987531 12234568999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc-----EEEeecccccccCCC
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV-----AHLSDFGIAKLLTGE 509 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~-----~kl~Dfg~a~~~~~~ 509 (527)
+|+|.+++...+..+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+|+.+...
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 99999999876667899999999999999999999 899999999999999998887 999999999976433
Q ss_pred CCcc-----ceeccccccccccC
Q 035895 510 DQSM-----TQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~-----~~~~~~~t~~y~aP 527 (527)
.... ......||+.|+||
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aP 186 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSI 186 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCH
T ss_pred CCCccccccccCCcCCCccccCh
Confidence 2111 12345689999998
No 153
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.89 E-value=4.3e-23 Score=203.38 Aligned_cols=141 Identities=28% Similarity=0.464 Sum_probs=112.1
Q ss_pred hhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec------------------------------cCccceeEEEE
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS------------------------------CSNEDFRALVL 431 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~------------------------------~~~~~~~~lv~ 431 (527)
...+.|++.+.||+|+||.||+|+... .+|+|+++.. +...+..++||
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~ 110 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVT 110 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEE
T ss_pred ecccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCcEEEEE
Confidence 345679999999999999999998754 5888886531 11234567999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+|+.......
T Consensus 111 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 111 QWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp ECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred ecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 999999999999877777899999999999999999999 89999999999999999999999999999986543222
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
........||+.|+||
T Consensus 188 ~~~~~~~~gt~~y~aP 203 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAP 203 (307)
T ss_dssp ------CCCCTTSCCH
T ss_pred cccccCCCCCcceECc
Confidence 2222345689999998
No 154
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=1.2e-23 Score=209.97 Aligned_cols=244 Identities=22% Similarity=0.240 Sum_probs=199.5
Q ss_pred CCCEEEcccCCCCcccChhHhhc-cccccEEEcccCccccccchhhcCCcCCcEEEeecCccccc-CcccccCCCCCCEE
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNF-SQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGS-ISITLGKLQKLQFL 169 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~-~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L 169 (527)
.++.+|+++|.+. +..+..+ .+.++.|++++|.+.+..+. +..+++|++|++++|.+++. ++..+..+++|+.|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4789999999887 3444443 24799999999999977666 55799999999999999865 77788999999999
Q ss_pred eccCcccccccChhhhcCcccCeeeeecc-cCCC-CCCccccCCccCceeeCCCC-CCCC--CchhhhCCC-CccEEEcc
Q 035895 170 SFRGNELEGSIPNVLCHLAVLFQLDLRGN-KLSG-SIPTCFGNLTALRNLHLDSN-ELTS--IPSILWNLK-DILYLDFW 243 (527)
Q Consensus 170 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~-~~p~~~~~l~~L~~L~L~~N-~l~~--lp~~~~~l~-~L~~l~l~ 243 (527)
++++|.+++..+..+..+++|++|++++| .+++ .++..+.++++|++|++++| .++. ++..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999999888899999999999999999 6775 26677889999999999999 9986 678888899 99999999
Q ss_pred CC--ccc-ccCCccccCCCCCCEEEccCCC-CCCCChhhhhcCCCCCEEEccccc-ceeecCCCCCCCCCCCEEeCCCCc
Q 035895 244 SN--LFV-GPLPSKIGNLKVLTRIDFSRNN-LLGDIPTTIQGLKSLQFLSLGHNR-LQGSIPNSFDDLVSLESLDLSNNN 318 (527)
Q Consensus 244 ~n--~~~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~ls~N~ 318 (527)
+| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|++|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 444 4567778889999999999999 776778899999999999999995 33222235788999999999999
Q ss_pred ccccCccchhhhc-cCCeeEeeeeee
Q 035895 319 LSEIIPLSLEKLL-YLNILLIVVVIL 343 (527)
Q Consensus 319 l~~~~p~~~~~l~-~L~~L~~~~~~~ 343 (527)
+ ....+..+. .+..|.++.+.+
T Consensus 283 i---~~~~~~~l~~~l~~L~l~~n~l 305 (336)
T 2ast_B 283 V---PDGTLQLLKEALPHLQINCSHF 305 (336)
T ss_dssp S---CTTCHHHHHHHSTTSEESCCCS
T ss_pred c---CHHHHHHHHhhCcceEEecccC
Confidence 3 333455543 366666665554
No 155
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.89 E-value=3.7e-23 Score=205.56 Aligned_cols=141 Identities=26% Similarity=0.354 Sum_probs=112.4
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcE----EEEEEEeec-----------------------------cCccceeEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGME----FAIKVFHFS-----------------------------CSNEDFRAL 429 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~----vavK~~~~~-----------------------------~~~~~~~~l 429 (527)
.++|++.+.||+|+||.||+|+.. +++. ||+|++... +...+..++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL 91 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEE
Confidence 356899999999999999999853 4544 777776321 012345679
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999876567888889999999999999999 899999999999999999999999999999987544
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
..........+|.+|+||
T Consensus 169 ~~~~~~~~~~~~~~y~aP 186 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMAL 186 (325)
T ss_dssp TTCCC-----CCTTTSCH
T ss_pred cccccccCCCCcccccCh
Confidence 333333445678889998
No 156
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.88 E-value=1.3e-23 Score=209.85 Aligned_cols=132 Identities=23% Similarity=0.271 Sum_probs=110.1
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeecc-------------------------C----------------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFSC-------------------------S---------------- 422 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~-------------------------~---------------- 422 (527)
.++|++.+.||+|+||+||+|+. +|+.||||++.... .
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 45689999999999999999987 68999999986321 0
Q ss_pred -----------------------------------ccceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Q 035895 423 -----------------------------------NEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALE 467 (527)
Q Consensus 423 -----------------------------------~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ 467 (527)
.++..++|||||++|++.+.+.+ ..+++..+..++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 14678999999999976665533 45788999999999999999
Q ss_pred HHhcCCCCCeEecCCCCCCeeeCCCC--------------------cEEEeecccccccCCCCCccceeccccccccccC
Q 035895 468 YLHFGYSTPIIHCDLKPHNKLLDDNI--------------------VAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 468 ylH~~~~~~iiHrdlk~~nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|||+ +++||||||||+|||++.++ .+||+|||+|+..... ..+||+.||||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccCh
Confidence 9992 47899999999999999876 9999999999976432 23688999999
No 157
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.88 E-value=3.1e-23 Score=204.53 Aligned_cols=142 Identities=30% Similarity=0.476 Sum_probs=108.0
Q ss_pred HhhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEee-------------------------------ccCccceeE
Q 035895 380 LLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHF-------------------------------SCSNEDFRA 428 (527)
Q Consensus 380 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~-------------------------------~~~~~~~~~ 428 (527)
+....++|++.+.||+|+||.||+|+. +++.||||++.. .+...+..+
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 110 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCE
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceE
Confidence 334456799999999999999999986 578999999742 123345678
Q ss_pred EEEEeccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeeCCCCcEEEeeccccc
Q 035895 429 LVLEYTTNGSLEKVLYSSNY--ILDILQRLNIMIDVTSALEYLHFGYSTP--IIHCDLKPHNKLLDDNIVAHLSDFGIAK 504 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~ylH~~~~~~--iiHrdlk~~nill~~~~~~kl~Dfg~a~ 504 (527)
+||||+++|+|.+++...+. .+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||+++
T Consensus 111 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 187 (309)
T 3p86_A 111 IVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR 187 (309)
T ss_dssp EEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC---
T ss_pred EEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCc
Confidence 99999999999999976432 3788899999999999999999 888 9999999999999999999999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
...... .......||+.|+||
T Consensus 188 ~~~~~~--~~~~~~~gt~~y~aP 208 (309)
T 3p86_A 188 LKASTF--LSSKSAAGTPEWMAP 208 (309)
T ss_dssp ----------------CCTTSCH
T ss_pred cccccc--cccccCCCCccccCh
Confidence 654321 122345688999998
No 158
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.88 E-value=3.9e-23 Score=205.53 Aligned_cols=138 Identities=30% Similarity=0.434 Sum_probs=110.9
Q ss_pred cCCccccceeccCCceEEEEEEc----cCCcEEEEEEEeec---------------------------------cCccce
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL----QDGMEFAIKVFHFS---------------------------------CSNEDF 426 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~----~~~~~vavK~~~~~---------------------------------~~~~~~ 426 (527)
.++|++.+.||+|+||.||+|+. .+++.||+|+++.. +..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999999986 47899999987421 123346
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
.++||||+++|+|.+++...+ .++......++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~ 171 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG-IFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKES 171 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC---
T ss_pred EEEEEeCCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCccccc
Confidence 689999999999999997543 5778888899999999999999 899999999999999999999999999999865
Q ss_pred CCCCCccceeccccccccccC
Q 035895 507 TGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~~~~~~~~t~~y~aP 527 (527)
..... ......||++|+||
T Consensus 172 ~~~~~--~~~~~~gt~~y~aP 190 (327)
T 3a62_A 172 IHDGT--VTHTFCGTIEYMAP 190 (327)
T ss_dssp ---------CTTSSCCTTSCH
T ss_pred ccCCc--cccccCCCcCccCH
Confidence 32221 12235689999998
No 159
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.88 E-value=1.1e-22 Score=199.26 Aligned_cols=140 Identities=19% Similarity=0.263 Sum_probs=116.0
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec----------------------------cCccceeEEEEEec
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~----------------------------~~~~~~~~lv~ey~ 434 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++... +......++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 35699999999999999999985 67899999987531 12234668999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc-----EEEeecccccccCCC
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV-----AHLSDFGIAKLLTGE 509 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~-----~kl~Dfg~a~~~~~~ 509 (527)
+|+|.+++...+..+++.++..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+|+.....
T Consensus 89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 99999999876667899999999999999999999 999999999999999987766 999999999876543
Q ss_pred CCc-----cceeccccccccccC
Q 035895 510 DQS-----MTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~-----~~~~~~~~t~~y~aP 527 (527)
... .......||+.|+||
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aP 187 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSI 187 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCH
T ss_pred cccccccccCccCCCCCcccCCc
Confidence 221 112345689999998
No 160
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.88 E-value=5.4e-23 Score=209.11 Aligned_cols=141 Identities=26% Similarity=0.416 Sum_probs=115.6
Q ss_pred cCCccccceeccCCceEEEEEEcc--------CCcEEEEEEEee-------------------------------ccCcc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ--------DGMEFAIKVFHF-------------------------------SCSNE 424 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~--------~~~~vavK~~~~-------------------------------~~~~~ 424 (527)
.+.|.+.+.||+|+||.||+|+.. .+..||||++.. .+..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 457889999999999999999852 346799999742 12334
Q ss_pred ceeEEEEEeccCCcHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee
Q 035895 425 DFRALVLEYTTNGSLEKVLYSSN---------------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL 489 (527)
Q Consensus 425 ~~~~lv~ey~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill 489 (527)
+..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 56789999999999999997643 34889999999999999999999 8999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 490 DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 490 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
++++.+||+|||+|+...............+|++|+||
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aP 262 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAP 262 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCH
Confidence 99999999999999877543322233344578889998
No 161
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.88 E-value=3.3e-23 Score=209.30 Aligned_cols=140 Identities=21% Similarity=0.339 Sum_probs=113.7
Q ss_pred cCCccccceeccCCceEEEEEEccC------CcEEEEEEEeecc------------------------------------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQD------GMEFAIKVFHFSC------------------------------------ 421 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~------~~~vavK~~~~~~------------------------------------ 421 (527)
.++|++.+.||+|+||.||+|.... ++.||||++....
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999998754 4789999964210
Q ss_pred ----Cc----cceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC--C
Q 035895 422 ----SN----EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD--D 491 (527)
Q Consensus 422 ----~~----~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~--~ 491 (527)
.. ....++||||+ +|+|.+++...+..+++..+..|+.|++.||+||| +++|+||||||+|||++ .
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~ 189 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKN 189 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSC
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCC
Confidence 00 13468999999 99999999876667899999999999999999999 89999999999999998 8
Q ss_pred CCcEEEeecccccccCCCCCcc-----ceeccccccccccC
Q 035895 492 NIVAHLSDFGIAKLLTGEDQSM-----TQTQTLAIIGYMAP 527 (527)
Q Consensus 492 ~~~~kl~Dfg~a~~~~~~~~~~-----~~~~~~~t~~y~aP 527 (527)
++.+||+|||+|+.+....... ......||+.||||
T Consensus 190 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 230 (364)
T 3op5_A 190 PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSI 230 (364)
T ss_dssp TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCH
T ss_pred CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCH
Confidence 8999999999998765322111 11234589999998
No 162
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.88 E-value=3.5e-23 Score=201.37 Aligned_cols=142 Identities=25% Similarity=0.410 Sum_probs=115.7
Q ss_pred hhcCCccccceeccCCceEEEEEEccCCcEEEEEEEee----------------------------ccCccceeEEEEEe
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHF----------------------------SCSNEDFRALVLEY 433 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~----------------------------~~~~~~~~~lv~ey 433 (527)
...++|++.+.||+|+||.||+|+..++..||||++.. .+..++..++||||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 34567999999999999999999999889999999753 12344567899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~ 513 (527)
+++|+|.+++......+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...... ..
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~ 176 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YT 176 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HH
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-cc
Confidence 9999999999875567899999999999999999999 9999999999999999999999999999998764321 11
Q ss_pred ceeccccccccccC
Q 035895 514 TQTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~~~~~~~t~~y~aP 527 (527)
......+|+.|+||
T Consensus 177 ~~~~~~~~~~y~aP 190 (283)
T 3gen_A 177 SSVGSKFPVRWSPP 190 (283)
T ss_dssp STTSTTSCGGGCCH
T ss_pred cccCCccCcccCCH
Confidence 12233467789998
No 163
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.88 E-value=3.9e-23 Score=201.71 Aligned_cols=137 Identities=26% Similarity=0.446 Sum_probs=112.8
Q ss_pred CCccccceeccCCceEEEEEEccCCcEEEEEEEeec-------------------------------cCccceeEEEEEe
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS-------------------------------CSNEDFRALVLEY 433 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~-------------------------------~~~~~~~~lv~ey 433 (527)
++|++.+.||+|+||.||+|+..+++.||+|++... +..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 579999999999999999999988999999997431 1234566899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~ 513 (527)
+++ +|.+++......+++.....++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR-- 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc--
Confidence 986 999998876667889999999999999999999 89999999999999999999999999999987643221
Q ss_pred ceeccccccccccC
Q 035895 514 TQTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~~~~~~~t~~y~aP 527 (527)
..+...+|+.|+||
T Consensus 156 ~~~~~~~t~~y~aP 169 (288)
T 1ob3_A 156 KYTHEIVTLWYRAP 169 (288)
T ss_dssp ------CCCTTCCH
T ss_pred ccccccccccccCc
Confidence 12234578899998
No 164
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.88 E-value=6.7e-23 Score=205.22 Aligned_cols=144 Identities=24% Similarity=0.403 Sum_probs=116.5
Q ss_pred hhhcCCccccceeccCCceEEEEEEc------cCCcEEEEEEEeec-------------------------------cCc
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARL------QDGMEFAIKVFHFS-------------------------------CSN 423 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~-------------------------------~~~ 423 (527)
....++|++.+.||+|+||.||+|+. .+++.||||++... +..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 33457899999999999999999985 24678999997421 223
Q ss_pred cceeEEEEEeccCCcHHHHHHhcCC----------------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 035895 424 EDFRALVLEYTTNGSLEKVLYSSNY----------------------ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCD 481 (527)
Q Consensus 424 ~~~~~lv~ey~~~g~L~~~l~~~~~----------------------~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrd 481 (527)
.+..++||||+++|+|.+++..... .+++..+..++.|++.||+||| +++|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCC
Confidence 4566899999999999999976432 2688889999999999999999 89999999
Q ss_pred CCCCCeeeCCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 482 LKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 482 lk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|||+||+++.++.+||+|||+++...............+|++|+||
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 243 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAP 243 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCH
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCH
Confidence 9999999999999999999999876543332223344578889998
No 165
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.88 E-value=7.4e-23 Score=203.54 Aligned_cols=141 Identities=26% Similarity=0.445 Sum_probs=111.3
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeeccC----------------------------------------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSCS---------------------------------------- 422 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~~---------------------------------------- 422 (527)
.++|++.+.||+|+||.||+|+.. +++.||||++.....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356899999999999999999975 789999999752100
Q ss_pred -----------------------------------------------ccceeEEEEEeccCCcHHHHHHhcC--CCCCHH
Q 035895 423 -----------------------------------------------NEDFRALVLEYTTNGSLEKVLYSSN--YILDIL 453 (527)
Q Consensus 423 -----------------------------------------------~~~~~~lv~ey~~~g~L~~~l~~~~--~~~~~~ 453 (527)
.+...++|||||++|+|.+++.... ...++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 0112689999999999999997643 234666
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc----------cceeccccccc
Q 035895 454 QRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS----------MTQTQTLAIIG 523 (527)
Q Consensus 454 ~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~----------~~~~~~~~t~~ 523 (527)
.+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 78889999999999999 999999999999999999999999999999987543211 11233568999
Q ss_pred cccC
Q 035895 524 YMAP 527 (527)
Q Consensus 524 y~aP 527 (527)
|+||
T Consensus 242 y~aP 245 (332)
T 3qd2_B 242 YMSP 245 (332)
T ss_dssp GSCH
T ss_pred ccCh
Confidence 9998
No 166
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.88 E-value=1.9e-23 Score=211.12 Aligned_cols=141 Identities=24% Similarity=0.385 Sum_probs=112.8
Q ss_pred cCCccccceeccCCceEEEEEEcc------CCcEEEEEEEeec------------------------------cCcccee
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKVFHFS------------------------------CSNEDFR 427 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~~------------------------------~~~~~~~ 427 (527)
.++|++.+.||+|+||+||+|+.. +++.||||++... +...+..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 356889999999999999999842 4678999997421 2234566
Q ss_pred EEEEEeccCCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC---cEEEe
Q 035895 428 ALVLEYTTNGSLEKVLYSSN------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI---VAHLS 498 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~---~~kl~ 498 (527)
++||||+++|+|.+++...+ ..+++.++..++.|++.||+||| +++|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence 89999999999999997643 34788899999999999999999 99999999999999999554 59999
Q ss_pred ecccccccCCCCCccceeccccccccccC
Q 035895 499 DFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 499 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|||+|+...............+|+.||||
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aP 255 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPP 255 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCH
T ss_pred CCccccccccccccccCCCcCCcccEECH
Confidence 99999865322222222334578899998
No 167
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.88 E-value=6.8e-23 Score=209.44 Aligned_cols=138 Identities=28% Similarity=0.400 Sum_probs=108.2
Q ss_pred cCCcccc-ceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------c----CccceeEEEEE
Q 035895 384 TDGFSAN-NLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------C----SNEDFRALVLE 432 (527)
Q Consensus 384 ~~~~~~~-~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------~----~~~~~~~lv~e 432 (527)
.++|.+. ++||+|+||+||+|+. .+++.||||++... + ...+..++|||
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E 139 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 139 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcchhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEE
Confidence 4567776 7899999999999986 46899999997421 0 12345789999
Q ss_pred eccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEeecccccccCC
Q 035895 433 YTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 433 y~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~---~~~~kl~Dfg~a~~~~~ 508 (527)
||+||+|.+++...+ ..+++.++..|+.||+.||+||| +.+|+||||||+|||++. ++.+||+|||+++....
T Consensus 140 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~ 216 (400)
T 1nxk_A 140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 216 (400)
T ss_dssp CCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-
T ss_pred eCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccccccCC
Confidence 999999999997643 35889999999999999999999 899999999999999987 78999999999987643
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
.. ..+..+||++||||
T Consensus 217 ~~---~~~~~~gt~~y~aP 232 (400)
T 1nxk_A 217 HN---SLTTPCYTPYYVAP 232 (400)
T ss_dssp -------------CTTCCG
T ss_pred CC---ccccCCCCCCccCH
Confidence 22 12345689999998
No 168
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.88 E-value=1.2e-22 Score=198.60 Aligned_cols=137 Identities=26% Similarity=0.402 Sum_probs=113.5
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccceeEEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNEDFRALVLE 432 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~~~~lv~e 432 (527)
++|++.+.||+|+||+||+|+. .+++.||||++... +..++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5799999999999999999986 46899999998531 123456689999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~ 512 (527)
|+++ ++.+.+......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+.......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 9986 666666665567899999999999999999999 89999999999999999999999999999987643322
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
......+|++|+||
T Consensus 157 -~~~~~~~t~~y~aP 170 (292)
T 3o0g_A 157 -CYSAEVVTLWYRPP 170 (292)
T ss_dssp -CCCSCCSCGGGCCH
T ss_pred -cccCCccccCCcCh
Confidence 22335678999998
No 169
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.88 E-value=3.6e-23 Score=207.03 Aligned_cols=144 Identities=26% Similarity=0.421 Sum_probs=116.4
Q ss_pred hhhcCCccccceeccCCceEEEEEEcc------CCcEEEEEEEee------------------------------ccCcc
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKVFHF------------------------------SCSNE 424 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~------------------------------~~~~~ 424 (527)
....++|++.+.||+|+||.||+|+.. +++.||||+++. .+...
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 344578999999999999999999864 358899999742 12344
Q ss_pred ceeEEEEEeccCCcHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 035895 425 DFRALVLEYTTNGSLEKVLYSSN-----------------------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCD 481 (527)
Q Consensus 425 ~~~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrd 481 (527)
+..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +++|+|||
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~D 199 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRD 199 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 56789999999999999997632 45788899999999999999999 99999999
Q ss_pred CCCCCeeeCCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 482 LKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 482 lk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|||+||+++.++.+||+|||+++...............+|+.|+||
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 245 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPP 245 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCH
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecCh
Confidence 9999999999999999999999876433222222334578899998
No 170
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.88 E-value=1.2e-22 Score=204.43 Aligned_cols=137 Identities=28% Similarity=0.414 Sum_probs=114.8
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-----------------------------------cCcccee
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-----------------------------------CSNEDFR 427 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-----------------------------------~~~~~~~ 427 (527)
.+.|++.+.||+|+||.||+|+.. +|+.||+|++... +...+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 456999999999999999999864 6899999998531 1223456
Q ss_pred EEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC----cEEEeecccc
Q 035895 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI----VAHLSDFGIA 503 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~----~~kl~Dfg~a 503 (527)
++||||++||+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 8999999999999999654 46789999999999999999999 89999999999999998776 7999999999
Q ss_pred cccCCCCCccceeccccccccccC
Q 035895 504 KLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 504 ~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+....... .....||++|+||
T Consensus 167 ~~~~~~~~---~~~~~gt~~y~aP 187 (361)
T 2yab_A 167 HEIEDGVE---FKNIFGTPEFVAP 187 (361)
T ss_dssp EECCTTCC---CCCCCSCGGGCCH
T ss_pred eEcCCCCc---cccCCCCccEECc
Confidence 87754321 2345689999998
No 171
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.88 E-value=4.5e-23 Score=201.87 Aligned_cols=141 Identities=27% Similarity=0.430 Sum_probs=111.3
Q ss_pred cCCccccceeccCCceEEEEEEc-----cCCcEEEEEEEeec-----------------------------cC--cccee
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-----QDGMEFAIKVFHFS-----------------------------CS--NEDFR 427 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~-----------------------------~~--~~~~~ 427 (527)
.+.|++.+.||+|+||.||+|++ .+++.||||++... +. .....
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 45689999999999999999984 36889999997431 11 12346
Q ss_pred EEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
++||||+++|+|.+++...+..+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 7999999999999999877666899999999999999999999 9999999999999999999999999999998775
Q ss_pred CCCCc-cceeccccccccccC
Q 035895 508 GEDQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~-~~~~~~~~t~~y~aP 527 (527)
..... .......++..|+||
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aP 186 (295)
T 3ugc_A 166 QDKEFFKVKEPGESPIFWYAP 186 (295)
T ss_dssp ----------CTTCGGGGCCH
T ss_pred CCcceeeeccCCCCccceeCc
Confidence 43221 122234467789998
No 172
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.88 E-value=9e-23 Score=203.51 Aligned_cols=138 Identities=28% Similarity=0.436 Sum_probs=112.3
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeec----------------------------cCcc----ceeEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS----------------------------CSNE----DFRALVL 431 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~----------------------------~~~~----~~~~lv~ 431 (527)
.++|++.+.||+|+||.||+|+.. ++.||||++... +... ...++||
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~ 114 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLIT 114 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEE
T ss_pred ccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEE
Confidence 467999999999999999999876 899999997421 1111 4678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCC--------CeEecCCCCCCeeeCCCCcEEEeecccc
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYST--------PIIHCDLKPHNKLLDDNIVAHLSDFGIA 503 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~--------~iiHrdlk~~nill~~~~~~kl~Dfg~a 503 (527)
||+++|+|.+++... .+++..+..++.+++.||+||| +. +|+||||||+||+++.++.+||+|||+|
T Consensus 115 e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 115 DYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp CCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred eccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 999999999999654 5788899999999999999999 66 9999999999999999999999999999
Q ss_pred cccCCCCCcc--ceeccccccccccC
Q 035895 504 KLLTGEDQSM--TQTQTLAIIGYMAP 527 (527)
Q Consensus 504 ~~~~~~~~~~--~~~~~~~t~~y~aP 527 (527)
+.+....... ......||++|+||
T Consensus 190 ~~~~~~~~~~~~~~~~~~gt~~y~aP 215 (337)
T 3mdy_A 190 VKFISDTNEVDIPPNTRVGTKRYMPP 215 (337)
T ss_dssp EECC---------CCSSCSCGGGCCH
T ss_pred eeeccccccccCCCCCCccCcceeCh
Confidence 8764332211 11234689999998
No 173
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.88 E-value=1.7e-22 Score=197.66 Aligned_cols=141 Identities=26% Similarity=0.398 Sum_probs=114.5
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec----------------------------cCccceeEEEEEe
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS----------------------------CSNEDFRALVLEY 433 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~----------------------------~~~~~~~~lv~ey 433 (527)
..+.|++.+.||+|+||.||+|+. .+++.||||++... ....+..++||||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 346799999999999999999985 67899999985321 1234566899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEeecccccccCCCC
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill---~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
+ +|+|.+++......+++.++..++.|++.||+||| +++|+||||||+||++ ++++.+||+|||+++......
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~ 162 (296)
T 4hgt_A 87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp C-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred c-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcc
Confidence 9 99999999866667899999999999999999999 9999999999999999 788999999999998765432
Q ss_pred Cc-----cceeccccccccccC
Q 035895 511 QS-----MTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~-----~~~~~~~~t~~y~aP 527 (527)
.. .......+|+.|+||
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aP 184 (296)
T 4hgt_A 163 THQHIPYRENKNLTGTARYASI 184 (296)
T ss_dssp TCCBCCCCCSCCCCSCGGGCCH
T ss_pred cCccCCCCcccccCCCccccch
Confidence 21 112245689999998
No 174
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.88 E-value=9.3e-23 Score=203.23 Aligned_cols=137 Identities=27% Similarity=0.430 Sum_probs=115.1
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee--------------------------------ccCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF--------------------------------SCSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~--------------------------------~~~~~~~~~l 429 (527)
..+.|++.+.||+|+||.||+|+. .+++.||||++.. .+..++..++
T Consensus 7 ~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 86 (336)
T 3h4j_B 7 HIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVM 86 (336)
T ss_dssp EETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 357899999999999999999996 6789999998742 1223456789
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+ +|+|.+++... ..+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 87 v~E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 87 VIEYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp EECCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EEECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 99999 68999988654 35788899999999999999999 899999999999999999999999999999876543
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
.. ....+||++|+||
T Consensus 162 ~~---~~~~~gt~~y~aP 176 (336)
T 3h4j_B 162 NF---LKTSCGSPNYAAP 176 (336)
T ss_dssp BT---TCCCTTSTTTSCG
T ss_pred cc---cccccCCcCcCCH
Confidence 21 1235689999998
No 175
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.88 E-value=1.6e-22 Score=205.46 Aligned_cols=138 Identities=25% Similarity=0.405 Sum_probs=116.2
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee-----------------------------ccCccceeEEEEEe
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF-----------------------------SCSNEDFRALVLEY 433 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~-----------------------------~~~~~~~~~lv~ey 433 (527)
.+.|++.+.||+|+||.||+|.. .+++.||+|++.. .+..++..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 35799999999999999999986 4689999998753 12334567899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC--CCcEEEeecccccccCCCCC
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD--NIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~--~~~~kl~Dfg~a~~~~~~~~ 511 (527)
+++|+|.+++...+..+++.++..++.|++.||+||| +++|+||||||+||+++. ++.+||+|||+|+.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999766667899999999999999999999 999999999999999974 57899999999998754321
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
.....||++|+||
T Consensus 207 ---~~~~~gt~~y~aP 219 (387)
T 1kob_A 207 ---VKVTTATAEFAAP 219 (387)
T ss_dssp ---EEEECSSGGGCCH
T ss_pred ---eeeeccCCCccCc
Confidence 2234689999998
No 176
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.88 E-value=1.5e-22 Score=206.19 Aligned_cols=137 Identities=26% Similarity=0.391 Sum_probs=110.2
Q ss_pred CCccccceeccCCceEEEEEEccCCcEEEEEEEeec---------------------------------cCccceeEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS---------------------------------CSNEDFRALVL 431 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~---------------------------------~~~~~~~~lv~ 431 (527)
+.|++.+.||+|+||.||+|...+++.||||++... +..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 349999999999999999999888999999997421 12334568999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
| +.+|+|.+++...+ .+++.++..++.||+.||+||| +.+|+||||||+|||++ ++.+||+|||+|+.+.....
T Consensus 136 E-~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK-SIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHCS-SCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 57889999997654 5788889999999999999999 99999999999999996 58999999999997754332
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
.......+||++||||
T Consensus 210 ~~~~~~~~gt~~y~aP 225 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPP 225 (390)
T ss_dssp ----CCSCCCGGGCCH
T ss_pred cccCCCCCcCCCccCh
Confidence 2223345689999998
No 177
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.88 E-value=1.4e-22 Score=210.94 Aligned_cols=137 Identities=26% Similarity=0.461 Sum_probs=116.6
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------cCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------CSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------~~~~~~~~lv 430 (527)
.++|.+.+.||+|+||.||+|+.. +|+.||||++... +..++..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 577999999999999999999864 7999999997421 2234567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||+++|+|.+++... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 95 ~E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 95 MEYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp EECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999998653 45889999999999999999999 9999999999999999999999999999999775432
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
. ....+||++|+||
T Consensus 171 ~---~~~~~gt~~y~aP 184 (476)
T 2y94_A 171 F---LRTSCGSPNYAAP 184 (476)
T ss_dssp C---BCCCCSCSTTCCH
T ss_pred c---ccccCCCcCeECh
Confidence 1 1235689999998
No 178
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=3.8e-22 Score=200.29 Aligned_cols=236 Identities=17% Similarity=0.137 Sum_probs=188.5
Q ss_pred CEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccC-cccccCCCCCCE-Eec
Q 035895 94 KKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSI-SITLGKLQKLQF-LSF 171 (527)
Q Consensus 94 ~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~-L~l 171 (527)
++++.++++++. +|..+ +.+++.|+|++|+|+.+.+.+|.++++|++|+|++|++.+.+ +..|.++++|.. +.+
T Consensus 12 ~~v~C~~~~Lt~-iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVTE-IPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCCS-CCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCCc-cCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 678999999996 56544 457999999999999888889999999999999999986644 567899998875 667
Q ss_pred cCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCC-CCCCCCchh-hhCC-CCccEEEccCCccc
Q 035895 172 RGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDS-NELTSIPSI-LWNL-KDILYLDFWSNLFV 248 (527)
Q Consensus 172 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~lp~~-~~~l-~~L~~l~l~~n~~~ 248 (527)
+.|+++...|..|..+++|++|++++|+++...+..+....++..|++.+ |+++.+|.. +..+ ..++.|++++|.+.
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 78999988899999999999999999999988888888888899999965 678888753 4444 46889999999998
Q ss_pred ccCCccccCCCCCCEEEccC-CCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCC-cccccCccc
Q 035895 249 GPLPSKIGNLKVLTRIDFSR-NNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNN-NLSEIIPLS 326 (527)
Q Consensus 249 ~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N-~l~~~~p~~ 326 (527)
...+..| ...+|++|++++ |.+....++.|.++++|++|++++|+|+...+..|.+ |+.|.+.++ .++. +| .
T Consensus 168 ~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~~-lP-~ 241 (350)
T 4ay9_X 168 EIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLKK-LP-T 241 (350)
T ss_dssp EECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCCC-CC-C
T ss_pred CCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcCc-CC-C
Confidence 6555444 567899999985 5666555567899999999999999999665555655 455554444 4544 44 4
Q ss_pred hhhhccCCeeEee
Q 035895 327 LEKLLYLNILLIV 339 (527)
Q Consensus 327 ~~~l~~L~~L~~~ 339 (527)
+.++.+|+.+++.
T Consensus 242 l~~l~~L~~l~l~ 254 (350)
T 4ay9_X 242 LEKLVALMEASLT 254 (350)
T ss_dssp TTTCCSCCEEECS
T ss_pred chhCcChhhCcCC
Confidence 7788888887754
No 179
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.88 E-value=1.8e-22 Score=210.59 Aligned_cols=140 Identities=26% Similarity=0.386 Sum_probs=116.8
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec----------------------------cCccceeEEEEEec
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~----------------------------~~~~~~~~lv~ey~ 434 (527)
.+.|++.+.||+|+||.||+|+. .+++.||||++... +...+..++||||+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 46799999999999999999985 67899999986431 12345668999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEeecccccccCCCCC
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill---~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
+|+|.+++......+++..+..|+.||+.||+||| +++||||||||+|||+ +.++.+||+|||+|+.+.....
T Consensus 86 -g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~ 161 (483)
T 3sv0_A 86 -GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTST 161 (483)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred -CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcc
Confidence 99999999866667899999999999999999999 9999999999999999 5889999999999997754322
Q ss_pred c-----cceeccccccccccC
Q 035895 512 S-----MTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~-----~~~~~~~~t~~y~aP 527 (527)
. .......||..|+||
T Consensus 162 ~~~~~~~~~~~~~gt~~Y~aP 182 (483)
T 3sv0_A 162 HQHIPYRENKNLTGTARYASV 182 (483)
T ss_dssp CCBCCCCCCCCCCSCTTTCCH
T ss_pred ccccccccccccCCCccccCH
Confidence 1 112245689999998
No 180
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.88 E-value=1.6e-22 Score=200.27 Aligned_cols=137 Identities=28% Similarity=0.447 Sum_probs=113.8
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec------------------------------cC--ccceeEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS------------------------------CS--NEDFRALVL 431 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~------------------------------~~--~~~~~~lv~ 431 (527)
+.|++.+.||+|+||.||+|+.. +++.||||++... +. .....++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 46899999999999999999865 5899999997531 11 122568999
Q ss_pred EeccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----CCCCcEEEeecccccc
Q 035895 432 EYTTNGSLEKVLYSSNY--ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL----DDNIVAHLSDFGIAKL 505 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill----~~~~~~kl~Dfg~a~~ 505 (527)
||+++|+|.+++..... .+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|+.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999976432 3889999999999999999999 9999999999999999 7888899999999988
Q ss_pred cCCCCCccceeccccccccccC
Q 035895 506 LTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 506 ~~~~~~~~~~~~~~~t~~y~aP 527 (527)
...... .....+|..|+||
T Consensus 166 ~~~~~~---~~~~~gt~~y~aP 184 (319)
T 4euu_A 166 LEDDEQ---FVSLYGTEEYLHP 184 (319)
T ss_dssp CCTTCC---BCCCCSCGGGCCH
T ss_pred cCCCCc---eeecccCCCccCH
Confidence 754322 2234688999998
No 181
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.88 E-value=1.7e-22 Score=201.56 Aligned_cols=141 Identities=26% Similarity=0.454 Sum_probs=113.7
Q ss_pred cCCccccceeccCCceEEEEEEc--------cCCcEEEEEEEee-------------------------------ccCcc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL--------QDGMEFAIKVFHF-------------------------------SCSNE 424 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~--------~~~~~vavK~~~~-------------------------------~~~~~ 424 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++.. .+..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 46789999999999999999985 3567899998742 12334
Q ss_pred ceeEEEEEeccCCcHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee
Q 035895 425 DFRALVLEYTTNGSLEKVLYSSN---------------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL 489 (527)
Q Consensus 425 ~~~~lv~ey~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill 489 (527)
+..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 56789999999999999997643 23788899999999999999999 8999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 490 DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 490 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+.++.+||+|||+++...............+|+.|+||
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 228 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAP 228 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeCh
Confidence 99999999999999877543322222334567889998
No 182
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.88 E-value=1e-22 Score=203.92 Aligned_cols=138 Identities=25% Similarity=0.379 Sum_probs=109.7
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeec---------------------------------cCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS---------------------------------CSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~---------------------------------~~~~~~~~lv 430 (527)
.+.|++.+.||+|+||.||+|...+++.||||++... +..++..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 3569999999999999999999988999999997521 1234466899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|| +.+|+|.+++... ..+++.++..++.|++.||+||| +++|+||||||+|||++ ++.+||+|||+|+......
T Consensus 88 ~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp EC-CCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred Ee-CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 99 5678999999764 45788899999999999999999 89999999999999997 5789999999998775433
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
.........||++|+||
T Consensus 162 ~~~~~~~~~gt~~y~aP 178 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPP 178 (343)
T ss_dssp --------CCCCSSCCH
T ss_pred ccccCCCCcCCcCcCCH
Confidence 32233345689999998
No 183
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.88 E-value=1.7e-22 Score=200.65 Aligned_cols=137 Identities=24% Similarity=0.432 Sum_probs=110.4
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec------------------------------cCccceeEEEEEe
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS------------------------------CSNEDFRALVLEY 433 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~------------------------------~~~~~~~~lv~ey 433 (527)
++|++.+.||+|+||.||+|+.. +++.||||++... +..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 57999999999999999999865 7899999987421 2234566899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~ 513 (527)
++ |+|.+++...+..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~-- 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-- 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc--
Confidence 98 5999998877667899999999999999999999 99999999999999999999999999999986543221
Q ss_pred ceeccccccccccC
Q 035895 514 TQTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~~~~~~~t~~y~aP 527 (527)
......+|++|+||
T Consensus 156 ~~~~~~~t~~y~aP 169 (324)
T 3mtl_A 156 TYDNEVVTLWYRPP 169 (324)
T ss_dssp -------CGGGCCH
T ss_pred ccccccCcccccCh
Confidence 22234678999998
No 184
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.87 E-value=1.3e-22 Score=204.47 Aligned_cols=137 Identities=26% Similarity=0.351 Sum_probs=107.2
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec----------------------------cCccceeEEEEEec
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~----------------------------~~~~~~~~lv~ey~ 434 (527)
.+.|++.+.||+|+||.||+|+.. +++.||||++... +...+..++||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 467999999999999999999875 7899999997531 22345678999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc--EEEeecccccccCCCCCc
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV--AHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~--~kl~Dfg~a~~~~~~~~~ 512 (527)
++|+|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+|+......
T Consensus 99 ~~~~L~~~l~~~~-~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~-- 172 (361)
T 3uc3_A 99 SGGELYERICNAG-RFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-- 172 (361)
T ss_dssp CSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred CCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC--
Confidence 9999999987543 5788899999999999999999 999999999999999987665 9999999998543221
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
......||++|+||
T Consensus 173 -~~~~~~gt~~y~aP 186 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAP 186 (361)
T ss_dssp ---------CTTSCH
T ss_pred -CCCCCcCCCCcCCh
Confidence 12335689999998
No 185
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.87 E-value=4.1e-23 Score=214.80 Aligned_cols=144 Identities=19% Similarity=0.377 Sum_probs=117.4
Q ss_pred HhhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec---------------------------cCccceeEEEEE
Q 035895 380 LLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS---------------------------CSNEDFRALVLE 432 (527)
Q Consensus 380 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~---------------------------~~~~~~~~lv~e 432 (527)
+....++|++.+.||+|+||.||+|+..++..||||+++.. +...+..++|||
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e 262 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITE 262 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEC
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEe
Confidence 34455678999999999999999999988899999997531 112345689999
Q ss_pred eccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 433 YTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 433 y~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
|+++|+|.+++...+ ..+++.+...++.||+.||+||| +++|+||||||+|||++.++.+||+|||+|+......
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~- 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE- 338 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-
Confidence 999999999997542 35788889999999999999999 8999999999999999999999999999998764321
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
........+|+.|+||
T Consensus 339 ~~~~~~~~~~~~y~aP 354 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAP 354 (454)
T ss_dssp HHTTCSSSSCGGGSCH
T ss_pred eeccCCCcccccccCH
Confidence 1112234467789998
No 186
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.87 E-value=1.5e-22 Score=199.85 Aligned_cols=142 Identities=25% Similarity=0.419 Sum_probs=115.5
Q ss_pred hcCCccccceeccCCceEEEEEEc------cCCcEEEEEEEee------------------------------ccCccce
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL------QDGMEFAIKVFHF------------------------------SCSNEDF 426 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~------------------------------~~~~~~~ 426 (527)
..++|.+.+.||+|+||.||+|+. .+++.||||+++. .+...+.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 346689999999999999999985 3458899999742 1233456
Q ss_pred eEEEEEeccCCcHHHHHHhcC-----------------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCC
Q 035895 427 RALVLEYTTNGSLEKVLYSSN-----------------------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLK 483 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk 483 (527)
.++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +++|+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccc
Confidence 789999999999999997643 23788889999999999999999 8999999999
Q ss_pred CCCeeeCCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 484 PHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 484 ~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|+||++++++.+||+|||+++...............+|+.|+||
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 221 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAI 221 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCH
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccCh
Confidence 99999999999999999999877543322222334567889998
No 187
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.87 E-value=1.5e-22 Score=199.83 Aligned_cols=141 Identities=26% Similarity=0.438 Sum_probs=116.1
Q ss_pred cCCccccceeccCCceEEEEEEc------cCCcEEEEEEEeec-------------------------------cCccce
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL------QDGMEFAIKVFHFS-------------------------------CSNEDF 426 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~-------------------------------~~~~~~ 426 (527)
.++|++.+.||+|+||.||+|+. .+++.||||+++.. +..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46789999999999999999974 35689999997521 223456
Q ss_pred eEEEEEeccCCcHHHHHHhcCC-----------------CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee
Q 035895 427 RALVLEYTTNGSLEKVLYSSNY-----------------ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL 489 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~-----------------~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill 489 (527)
.++||||+++|+|.+++..... .+++.+...++.|++.||+||| +++|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 6899999999999999976532 3789999999999999999999 8999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 490 DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 490 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+.++.+|++|||+++...............+|+.|+||
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 216 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAP 216 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeCh
Confidence 99999999999999877544332222334567889998
No 188
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.87 E-value=2.6e-22 Score=198.71 Aligned_cols=138 Identities=26% Similarity=0.406 Sum_probs=100.3
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec------------------------------cCccceeEEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS------------------------------CSNEDFRALVLE 432 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~------------------------------~~~~~~~~lv~e 432 (527)
.++|++.+.||+|+||.||+|+.. +++.||+|++... +..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 467999999999999999999864 6899999997531 223456789999
Q ss_pred eccCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 433 YTTNGSLEKVLYSSN-----YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 433 y~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
|++ |+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999886532 34788888999999999999999 8999999999999999999999999999998764
Q ss_pred CCCCccceeccccccccccC
Q 035895 508 GEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~~~~~~~~t~~y~aP 527 (527)
.... ......+|++|+||
T Consensus 160 ~~~~--~~~~~~~t~~y~aP 177 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAP 177 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCH
T ss_pred CCcc--cCCCCcccccccCc
Confidence 3221 12234678999998
No 189
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.87 E-value=1.2e-22 Score=200.76 Aligned_cols=150 Identities=24% Similarity=0.389 Sum_probs=120.2
Q ss_pred ccHHHHhhhcCCccccceeccCCceEEEEEEc------cCCcEEEEEEEeec----------------------------
Q 035895 375 FSYQELLRATDGFSANNLIGRGSFGSVYKARL------QDGMEFAIKVFHFS---------------------------- 420 (527)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~---------------------------- 420 (527)
+....+....++|++.+.||+|+||.||+|+. .+++.||||++...
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34445555667899999999999999999973 35689999997421
Q ss_pred ---cC-ccceeEEEEEeccCCcHHHHHHhcCCC---------------CCHHHHHHHHHHHHHHHHHHhcCCCCCeEecC
Q 035895 421 ---CS-NEDFRALVLEYTTNGSLEKVLYSSNYI---------------LDILQRLNIMIDVTSALEYLHFGYSTPIIHCD 481 (527)
Q Consensus 421 ---~~-~~~~~~lv~ey~~~g~L~~~l~~~~~~---------------~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrd 481 (527)
+. .....++||||+++|+|.+++...... +++..+..++.|++.||+||| +++|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence 11 123478999999999999999765322 788889999999999999999 89999999
Q ss_pred CCCCCeeeCCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 482 LKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 482 lk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|||+||+++.++.+|++|||+++...............+|++|+||
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aP 219 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP 219 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCH
T ss_pred CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCc
Confidence 9999999999999999999999876543332233344578899998
No 190
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.87 E-value=2e-22 Score=202.39 Aligned_cols=138 Identities=26% Similarity=0.428 Sum_probs=112.9
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec----------------------------------cCccceeEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS----------------------------------CSNEDFRAL 429 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~----------------------------------~~~~~~~~l 429 (527)
+.|++.+.||+|+||.||+|+. .+++.||||++... +..++..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4589999999999999999986 57899999987421 123456789
Q ss_pred EEEeccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc---EEEeecccc
Q 035895 430 VLEYTTNGSLEKVLYSS---NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV---AHLSDFGIA 503 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~---~kl~Dfg~a 503 (527)
|||||+||+|.+.+... +..+++..+..++.|++.||+||| +++|+||||||+||+++.++. +|++|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998887643 234788889999999999999999 999999999999999986544 999999999
Q ss_pred cccCCCCCccceeccccccccccC
Q 035895 504 KLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 504 ~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+....... ......||++|+||
T Consensus 181 ~~~~~~~~--~~~~~~gt~~y~aP 202 (351)
T 3c0i_A 181 IQLGESGL--VAGGRVGTPHFMAP 202 (351)
T ss_dssp EECCTTSC--BCCCCCSCGGGCCH
T ss_pred eEecCCCe--eecCCcCCcCccCH
Confidence 87754321 22345689999998
No 191
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.87 E-value=2.2e-22 Score=208.05 Aligned_cols=138 Identities=25% Similarity=0.403 Sum_probs=113.8
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee-------------------------------ccCccceeEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF-------------------------------SCSNEDFRALVL 431 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~-------------------------------~~~~~~~~~lv~ 431 (527)
.+.|++.+.||+|+||.||+|.. .+|+.||+|++.. .+..++..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 45699999999999999999985 5789999998743 123455678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC---CCCcEEEeecccccccCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD---DNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~---~~~~~kl~Dfg~a~~~~~ 508 (527)
|||+||+|.+.+...+ .+++.++..++.|++.||+||| +++|+||||||+||+++ +++.+||+|||+|+....
T Consensus 90 E~~~gg~L~~~i~~~~-~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 90 DLVTGGELFEDIVARE-YYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp CCCBCCBHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 9999999999987653 5788899999999999999999 99999999999999998 468899999999987754
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... ......||++||||
T Consensus 166 ~~~--~~~~~~gt~~Y~AP 182 (444)
T 3soa_A 166 EQQ--AWFGFAGTPGYLSP 182 (444)
T ss_dssp TCC--BCCCSCSCGGGCCH
T ss_pred CCc--eeecccCCcccCCH
Confidence 322 22345689999998
No 192
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.87 E-value=8e-23 Score=201.79 Aligned_cols=140 Identities=24% Similarity=0.458 Sum_probs=107.4
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeeccC--------------------------------cc----ce
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFSCS--------------------------------NE----DF 426 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~--------------------------------~~----~~ 426 (527)
.+.|++.+.||+|+||.||+|+. .+++.||||++..... .+ ..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 36799999999999999999985 6789999999853110 01 12
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
.++||||++||+|.+++...+ .+++.+...++.|++.||+|+| +++|+||||||+||+++.++.+||+|||+++.+
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG-PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred cEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 389999999999999997543 5788899999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCc-cceeccccccccccC
Q 035895 507 TGEDQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~-~~~~~~~~t~~y~aP 527 (527)
...... .......||++|+||
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aP 188 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSP 188 (311)
T ss_dssp ---------------CCTTCCH
T ss_pred cccccccccccccCcCcccCCH
Confidence 533221 112234589999998
No 193
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.87 E-value=6.5e-23 Score=203.31 Aligned_cols=146 Identities=22% Similarity=0.374 Sum_probs=117.2
Q ss_pred HHhhhcCCccccceeccCCceEEEEEEcc------CCcEEEEEEEee------------------------------ccC
Q 035895 379 ELLRATDGFSANNLIGRGSFGSVYKARLQ------DGMEFAIKVFHF------------------------------SCS 422 (527)
Q Consensus 379 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~~------~~~~vavK~~~~------------------------------~~~ 422 (527)
++....+.|++.+.||+|+||.||+|+.. +++.||||++.. .+.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 44455678999999999999999999754 468899998742 123
Q ss_pred ccceeEEEEEeccCCcHHHHHHhcC---------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC
Q 035895 423 NEDFRALVLEYTTNGSLEKVLYSSN---------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI 493 (527)
Q Consensus 423 ~~~~~~lv~ey~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~ 493 (527)
..+..++||||+++|+|.+++...+ ..+++..+..++.|++.||+||| +++|+||||||+||+++.++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCCC
Confidence 3456789999999999999987532 34578889999999999999999 89999999999999999999
Q ss_pred cEEEeecccccccCCCCCccceeccccccccccC
Q 035895 494 VAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 494 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.+||+|||+++...............+|+.|+||
T Consensus 176 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 209 (322)
T 1p4o_A 176 TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209 (322)
T ss_dssp CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCH
T ss_pred eEEECcCccccccccccccccccCCCCCCCccCh
Confidence 9999999999876433222222234567889998
No 194
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.87 E-value=1.9e-22 Score=205.55 Aligned_cols=139 Identities=25% Similarity=0.428 Sum_probs=104.6
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec--------------------------------c--Ccccee
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS--------------------------------C--SNEDFR 427 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~--------------------------------~--~~~~~~ 427 (527)
..+.|++.+.||+|+||.||+|.. .+|+.||||++... + ......
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 357899999999999999999985 57899999987321 1 112357
Q ss_pred EEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
++|||||+ |+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA--NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHH--TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 89999998 599999875 35788888999999999999999 9999999999999999999999999999998764
Q ss_pred CCCC-------------------ccceeccccccccccC
Q 035895 508 GEDQ-------------------SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~-------------------~~~~~~~~~t~~y~aP 527 (527)
.... ....+..+||++|+||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 199 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAP 199 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCH
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCH
Confidence 2110 1112345789999998
No 195
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.87 E-value=7.4e-23 Score=203.56 Aligned_cols=140 Identities=25% Similarity=0.384 Sum_probs=108.7
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcE----EEEEEEeecc-----------------------------CccceeEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGME----FAIKVFHFSC-----------------------------SNEDFRALV 430 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~----vavK~~~~~~-----------------------------~~~~~~~lv 430 (527)
++|+..+.||+|+||.||+|+.. +++. ||+|.+.... ...+..++|
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v 94 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 56899999999999999999853 4443 5888763210 012345789
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+......
T Consensus 95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 9999999999999887777899999999999999999999 8999999999999999999999999999999875443
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
.........+|+.|+||
T Consensus 172 ~~~~~~~~~~t~~y~aP 188 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMAL 188 (327)
T ss_dssp C-------CCCGGGSCH
T ss_pred ccccccCCCccccccCh
Confidence 33333344568899998
No 196
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.87 E-value=1.8e-22 Score=201.84 Aligned_cols=138 Identities=28% Similarity=0.467 Sum_probs=113.4
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------cCccceeEEEEEeccC
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------CSNEDFRALVLEYTTN 436 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------~~~~~~~~lv~ey~~~ 436 (527)
.++|++.+.||+|+||.||+|+.. +++.||||++... +...+..++|||||+|
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~g 100 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKG 100 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCCCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCC
Confidence 356999999999999999999864 6899999997531 2334567899999999
Q ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-C---CcEEEeecccccccCCCCCc
Q 035895 437 GSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD-N---IVAHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 437 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~-~---~~~kl~Dfg~a~~~~~~~~~ 512 (527)
|+|.+++... ..+++.++..++.+|+.||+||| +++|+||||||+||++.+ + +.+||+|||+++.......
T Consensus 101 g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~- 175 (342)
T 2qr7_A 101 GELLDKILRQ-KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG- 175 (342)
T ss_dssp CBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC-
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC-
Confidence 9999998754 45788899999999999999999 999999999999999843 2 3599999999987654322
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
.....++|+.|+||
T Consensus 176 -~~~~~~gt~~y~aP 189 (342)
T 2qr7_A 176 -LLMTPCYTANFVAP 189 (342)
T ss_dssp -CBCCSSCCSSCCCH
T ss_pred -ceeccCCCccccCH
Confidence 12235689999998
No 197
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.87 E-value=3e-22 Score=195.92 Aligned_cols=140 Identities=26% Similarity=0.402 Sum_probs=116.3
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec----------------------------cCccceeEEEEEec
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~----------------------------~~~~~~~~lv~ey~ 434 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++... ....+..++||||+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 46799999999999999999985 67899999987531 12234568999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEeecccccccCCCCC
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill---~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
+|+|.+++...+..+++.++..++.|++.||+||| +++|+||||||+||++ ++++.+||+|||+++.......
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~ 163 (296)
T 3uzp_A 88 -GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred -CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccc
Confidence 89999999866667899999999999999999999 9999999999999999 4789999999999987654322
Q ss_pred cc-----ceeccccccccccC
Q 035895 512 SM-----TQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~-----~~~~~~~t~~y~aP 527 (527)
.. ......||+.|+||
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aP 184 (296)
T 3uzp_A 164 HQHIPYRENKNLTGTARYASI 184 (296)
T ss_dssp CCBCCCCCSCCCCSCTTTCCH
T ss_pred ccccccccccccccccccCCh
Confidence 11 12345688999998
No 198
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.87 E-value=1e-22 Score=198.82 Aligned_cols=139 Identities=29% Similarity=0.459 Sum_probs=104.4
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeecc------------------------------CccceeEEEEEe
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFSC------------------------------SNEDFRALVLEY 433 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~------------------------------~~~~~~~lv~ey 433 (527)
.+.|++.+.||+|+||.||+|+... .||+|++.... ...+..++||||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~ 100 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW 100 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEe
Confidence 4679999999999999999998754 59999975311 123456799999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~ 513 (527)
+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 9999999999766667899999999999999999999 8999999999999999999999999999998664322222
Q ss_pred ceeccccccccccC
Q 035895 514 TQTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~~~~~~~t~~y~aP 527 (527)
......||+.|+||
T Consensus 178 ~~~~~~gt~~y~aP 191 (289)
T 3og7_A 178 QFEQLSGSILWMAP 191 (289)
T ss_dssp ------CCCTTCCH
T ss_pred cccccCCCccccCc
Confidence 22345688999998
No 199
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.87 E-value=2.2e-22 Score=197.34 Aligned_cols=138 Identities=30% Similarity=0.455 Sum_probs=112.2
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-----------------------------------------
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS----------------------------------------- 420 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~----------------------------------------- 420 (527)
..++|++.+.||+|+||.||+|+. .+++.||||++...
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 357899999999999999999985 56899999987421
Q ss_pred --------------cC--ccceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCC
Q 035895 421 --------------CS--NEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKP 484 (527)
Q Consensus 421 --------------~~--~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~ 484 (527)
+. .++..++||||+++|+|.+++. ...+++.+...++.|++.||+||| +++|+||||||
T Consensus 91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp 165 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT--LKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKP 165 (298)
T ss_dssp HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC--SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCG
T ss_pred HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCH
Confidence 00 1345689999999999987653 346889999999999999999999 89999999999
Q ss_pred CCeeeCCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 485 HNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 485 ~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+||+++.++.+||+|||+++....... ......||+.|+||
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aP 206 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAP 206 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCG
T ss_pred HHEEECCCCCEEEecCCCccccccccc--cccCCcCCccccCh
Confidence 999999999999999999987654322 22345689999998
No 200
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.87 E-value=2.4e-22 Score=202.59 Aligned_cols=146 Identities=28% Similarity=0.386 Sum_probs=118.7
Q ss_pred ccccHHHHhhhcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------
Q 035895 373 RRFSYQELLRATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS------------------------------- 420 (527)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~------------------------------- 420 (527)
..+++++-....++|++.+.||+|+||.||+|+. .+++.||||++...
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 3444444445567899999999999999999986 57899999997420
Q ss_pred --cCccceeEEEEEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC------
Q 035895 421 --CSNEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD------ 491 (527)
Q Consensus 421 --~~~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~------ 491 (527)
+...+..++||||+ +|+|.+++.... ..+++.++..++.|++.||+||| +++|+||||||+|||++.
T Consensus 103 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~ 178 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKS 178 (360)
T ss_dssp EEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEE
T ss_pred ceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccccc
Confidence 11235678999999 899999997654 34788899999999999999999 999999999999999975
Q ss_pred -------------------CCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 492 -------------------NIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 492 -------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
++.+||+|||+|+...... ....||+.|+||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aP 228 (360)
T 3llt_A 179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAP 228 (360)
T ss_dssp EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCH
T ss_pred ccchhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCc
Confidence 7899999999998754321 235678999998
No 201
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.87 E-value=2.4e-22 Score=197.22 Aligned_cols=140 Identities=23% Similarity=0.433 Sum_probs=114.7
Q ss_pred CCccccceeccCCceEEEEEEc-----cCCcEEEEEEEeec------------------------------cCcc--cee
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-----QDGMEFAIKVFHFS------------------------------CSNE--DFR 427 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~------------------------------~~~~--~~~ 427 (527)
+.|++.+.||+|+||.||+|++ .+++.||||+++.. +..+ ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3488899999999999999983 46899999997521 1112 456
Q ss_pred EEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
++||||+++|+|.+++......+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 8999999999999999766667899999999999999999999 9999999999999999999999999999998875
Q ss_pred CCCCc-cceeccccccccccC
Q 035895 508 GEDQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~-~~~~~~~~t~~y~aP 527 (527)
..... .......+|..|+||
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aP 198 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAP 198 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCH
T ss_pred CCCcceeccCCCCCCccccCC
Confidence 43321 122234578889998
No 202
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.87 E-value=3.4e-22 Score=193.84 Aligned_cols=140 Identities=30% Similarity=0.501 Sum_probs=107.9
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec--------------------------------cCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS--------------------------------CSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~--------------------------------~~~~~~~~l 429 (527)
..++|++.+.||+|+||.||+|+. .+++.||||++... +...+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 456799999999999999999986 57899999997421 123456789
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++......+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+|++|||+++.....
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999999999876667899999999999999999999 899999999999999999999999999999876432
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
.. ......+|+.|+||
T Consensus 166 ~~--~~~~~~~~~~y~aP 181 (278)
T 3cok_A 166 HE--KHYTLCGTPNYISP 181 (278)
T ss_dssp ------------------
T ss_pred CC--cceeccCCCCcCCc
Confidence 21 11234578899998
No 203
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.87 E-value=2.5e-22 Score=199.68 Aligned_cols=140 Identities=29% Similarity=0.415 Sum_probs=116.2
Q ss_pred CCccccceeccCCceEEEEEEc-----cCCcEEEEEEEeec-----------------------------c--CccceeE
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-----QDGMEFAIKVFHFS-----------------------------C--SNEDFRA 428 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~-----------------------------~--~~~~~~~ 428 (527)
++|++.+.||+|+||.||+|+. .+++.||||++... + ......+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5689999999999999999983 46889999997421 1 1345578
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
+||||+++|+|.+++......+++.++..++.+++.||+||| +++|+||||||+||+++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999875566899999999999999999999 89999999999999999999999999999997754
Q ss_pred CCCc-cceeccccccccccC
Q 035895 509 EDQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~-~~~~~~~~t~~y~aP 527 (527)
.... .......+|..|+||
T Consensus 180 ~~~~~~~~~~~~~~~~y~aP 199 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAP 199 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCH
T ss_pred CCccceeeccCCccccccCH
Confidence 3221 122234578889998
No 204
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.87 E-value=1.7e-22 Score=212.32 Aligned_cols=142 Identities=25% Similarity=0.444 Sum_probs=117.4
Q ss_pred hhcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee----------------------------ccCccceeEEEEE
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF----------------------------SCSNEDFRALVLE 432 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~----------------------------~~~~~~~~~lv~e 432 (527)
...++|++.+.||+|+||.||+|+.. ++..||||+++. .+..++..++|||
T Consensus 217 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred cCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 34566899999999999999999976 488999999742 2334556789999
Q ss_pred eccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 433 YTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 433 y~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
|+++|+|.+++... ...+++..+..++.||+.||+||| +++|+||||||+|||++.++.+||+|||+++......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 372 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT- 372 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-
Confidence 99999999999864 345889899999999999999999 9999999999999999999999999999999775332
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
........+++.|+||
T Consensus 373 ~~~~~~~~~~~~y~aP 388 (495)
T 1opk_A 373 YTAHAGAKFPIKWTAP 388 (495)
T ss_dssp EECCTTCCCCGGGCCH
T ss_pred eeecCCCcCCcceeCH
Confidence 1122234467789998
No 205
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.87 E-value=3.3e-22 Score=200.67 Aligned_cols=138 Identities=27% Similarity=0.421 Sum_probs=106.4
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec---------------------------cCccceeEEEEEec
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS---------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~---------------------------~~~~~~~~lv~ey~ 434 (527)
..+.|++.+.||+|+||.||+|+.. +++.||||++... +...+..++||||+
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 130 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELV 130 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccchhHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeC
Confidence 3467999999999999999999975 5789999997531 22345678999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEeecccccccCCCCC
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~---~~~~kl~Dfg~a~~~~~~~~ 511 (527)
++|+|.+++... ..+++.+...++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++......
T Consensus 131 ~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~- 205 (349)
T 2w4o_A 131 TGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV- 205 (349)
T ss_dssp CSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc-
Confidence 999999998654 45788899999999999999999 899999999999999975 8999999999998764322
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
......||++|+||
T Consensus 206 --~~~~~~gt~~y~aP 219 (349)
T 2w4o_A 206 --LMKTVCGTPGYCAP 219 (349)
T ss_dssp ---------CGGGSCH
T ss_pred --ccccccCCCCccCH
Confidence 12235689999998
No 206
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.87 E-value=7e-22 Score=194.66 Aligned_cols=137 Identities=29% Similarity=0.403 Sum_probs=112.5
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeecc-------------------------------------Ccc-
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFSC-------------------------------------SNE- 424 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~-------------------------------------~~~- 424 (527)
.+.|++.+.||+|+||+||+|+. .+++.||||++.... ...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56899999999999999999996 578999999985210 001
Q ss_pred ----ceeEEEEEeccCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 035895 425 ----DFRALVLEYTTNGSLEKVLYSSNY-ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSD 499 (527)
Q Consensus 425 ----~~~~lv~ey~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~D 499 (527)
...++||||+. |+|.+++..... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~D 163 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLAD 163 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECS
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEee
Confidence 14679999997 599999876543 3889999999999999999999 99999999999999999999999999
Q ss_pred cccccccCCCCCccceeccccccccccC
Q 035895 500 FGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 500 fg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
||+|+....... .+...+|++|+||
T Consensus 164 fg~a~~~~~~~~---~~~~~gt~~y~aP 188 (308)
T 3g33_A 164 FGLARIYSYQMA---LTPVVVTLWYRAP 188 (308)
T ss_dssp CSCTTTSTTCCC---SGGGGCCCSSCCH
T ss_pred CccccccCCCcc---cCCccccccccCc
Confidence 999987653322 2345689999998
No 207
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.87 E-value=1.4e-22 Score=196.90 Aligned_cols=141 Identities=26% Similarity=0.407 Sum_probs=105.0
Q ss_pred hcCCccccceeccCCceEEEEEEcc----CCcEEEEEEEeec-----------------------------cCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFS-----------------------------CSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~-----------------------------~~~~~~~~l 429 (527)
..+.|++.+.||+|+||.||+|+.. .+..||+|++... +..++..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~l 92 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI 92 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEE
Confidence 3467899999999999999999864 3467999986421 112345689
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++...+..+++.....++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 169 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCcc
Confidence 99999999999999876667899999999999999999999 899999999999999999999999999999876533
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
.. .......+|+.|+||
T Consensus 170 ~~-~~~~~~~~~~~y~aP 186 (281)
T 1mp8_A 170 TY-YKASKGKLPIKWMAP 186 (281)
T ss_dssp ----------CCGGGCCH
T ss_pred cc-cccccCCCcccccCh
Confidence 21 122234467789998
No 208
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.87 E-value=6.2e-22 Score=196.79 Aligned_cols=136 Identities=27% Similarity=0.407 Sum_probs=113.8
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-----------------------------------cCccceeE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-----------------------------------CSNEDFRA 428 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-----------------------------------~~~~~~~~ 428 (527)
+.|++.+.||+|+||.||+|+.. +|+.||+|++... +..++..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45899999999999999999864 6899999987531 12234568
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC----cEEEeeccccc
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI----VAHLSDFGIAK 504 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~----~~kl~Dfg~a~ 504 (527)
+||||+++|+|.+++... ..+++.++..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 91 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 999999999999998653 45788899999999999999999 99999999999999998877 89999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
....... .....||+.|+||
T Consensus 167 ~~~~~~~---~~~~~gt~~y~aP 186 (326)
T 2y0a_A 167 KIDFGNE---FKNIFGTPEFVAP 186 (326)
T ss_dssp ECCTTSC---CCCCCSCTTTCCH
T ss_pred ECCCCCc---cccccCCcCcCCc
Confidence 7753321 2235689999998
No 209
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.87 E-value=2.9e-22 Score=202.08 Aligned_cols=137 Identities=26% Similarity=0.478 Sum_probs=114.0
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccceeEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNEDFRALVL 431 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~~~~lv~ 431 (527)
.++|++.+.||+|+||.||+|.. .+++.||+|++... +..++..++||
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 35699999999999999999986 46899999998531 23345678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC---CcEEEeecccccccCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDN---IVAHLSDFGIAKLLTG 508 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~---~~~kl~Dfg~a~~~~~ 508 (527)
||+++|+|.+.+... ..+++.++..++.||+.||+||| +++|+||||||+||+++.+ +.+||+|||+++....
T Consensus 108 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 108 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp CCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 999999999988654 45788899999999999999999 8999999999999999854 4699999999987653
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... .....||++|+||
T Consensus 184 ~~~---~~~~~gt~~y~aP 199 (362)
T 2bdw_A 184 SEA---WHGFAGTPGYLSP 199 (362)
T ss_dssp CCS---CCCSCSCTTTCCH
T ss_pred Ccc---cccCCCCccccCH
Confidence 321 2235689999998
No 210
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.87 E-value=1.6e-22 Score=196.28 Aligned_cols=143 Identities=22% Similarity=0.409 Sum_probs=116.5
Q ss_pred hhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec---------------------------cCccceeEEEEEe
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS---------------------------CSNEDFRALVLEY 433 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~---------------------------~~~~~~~~lv~ey 433 (527)
....++|++.+.||+|+||.||+|+..++..||||++... +...+..++||||
T Consensus 9 ~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~ 88 (279)
T 1qpc_A 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEY 88 (279)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred ccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEec
Confidence 3345679999999999999999999888889999987531 1123456899999
Q ss_pred ccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 035895 434 TTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 434 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~ 512 (527)
+++|+|.+++.... ..+++.++..++.|++.||+||| +++|+||||||+||++++++.+||+|||+++.......
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 164 (279)
T 1qpc_A 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY- 164 (279)
T ss_dssp CTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-
T ss_pred CCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-
Confidence 99999999986532 25788899999999999999999 99999999999999999999999999999987753321
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
.......++..|+||
T Consensus 165 ~~~~~~~~~~~y~aP 179 (279)
T 1qpc_A 165 TAREGAKFPIKWTAP 179 (279)
T ss_dssp ECCTTCCCCTTTSCH
T ss_pred ccccCCCCccCccCh
Confidence 112233467789998
No 211
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.87 E-value=3.1e-22 Score=202.66 Aligned_cols=133 Identities=26% Similarity=0.467 Sum_probs=106.8
Q ss_pred ccceeccCCceEEEEEEc-cCCcEEEEEEEee-----------------------------ccCccceeEEEEEeccCCc
Q 035895 389 ANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF-----------------------------SCSNEDFRALVLEYTTNGS 438 (527)
Q Consensus 389 ~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~-----------------------------~~~~~~~~~lv~ey~~~g~ 438 (527)
..+.||+|+||.||+|+. .+|+.||+|++.. .+...+..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 357899999999999986 5789999999753 1234456789999999999
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee--CCCCcEEEeecccccccCCCCCcccee
Q 035895 439 LEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL--DDNIVAHLSDFGIAKLLTGEDQSMTQT 516 (527)
Q Consensus 439 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 516 (527)
|.+++......+++.++..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++....... ..
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~ 246 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LK 246 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---cc
Confidence 99998776667899999999999999999999 9999999999999999 5678999999999997754322 22
Q ss_pred ccccccccccC
Q 035895 517 QTLAIIGYMAP 527 (527)
Q Consensus 517 ~~~~t~~y~aP 527 (527)
...||++|+||
T Consensus 247 ~~~gt~~y~aP 257 (373)
T 2x4f_A 247 VNFGTPEFLAP 257 (373)
T ss_dssp CCCSSCTTCCH
T ss_pred cccCCCcEeCh
Confidence 34689999998
No 212
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.87 E-value=1.5e-22 Score=200.79 Aligned_cols=144 Identities=24% Similarity=0.478 Sum_probs=101.2
Q ss_pred hhhcCCccccceeccCCceEEEEEEccCC----cEEEEEEEeecc-------------------------------Cccc
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARLQDG----MEFAIKVFHFSC-------------------------------SNED 425 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~----~~vavK~~~~~~-------------------------------~~~~ 425 (527)
....+.|++.+.||+|+||.||+|+.... ..||||++.... ...+
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 34456799999999999999999987543 379999874310 1111
Q ss_pred ------eeEEEEEeccCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc
Q 035895 426 ------FRALVLEYTTNGSLEKVLYSSN-----YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV 494 (527)
Q Consensus 426 ------~~~lv~ey~~~g~L~~~l~~~~-----~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~ 494 (527)
..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +++|+||||||+||++++++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCC
Confidence 1289999999999999986432 24788899999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCCCCCccceeccccccccccC
Q 035895 495 AHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 495 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+||+|||+|+...............+++.|+||
T Consensus 176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aP 208 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLAL 208 (323)
T ss_dssp EEECCCCC-----------------CCGGGCCH
T ss_pred EEEeeccccccccccccccccccccCcccccCc
Confidence 999999999876543322223334567789998
No 213
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.87 E-value=2.9e-22 Score=208.77 Aligned_cols=119 Identities=29% Similarity=0.444 Sum_probs=93.7
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------c-----Cccce
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------C-----SNEDF 426 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~-----~~~~~ 426 (527)
.+.|++.+.||+|+||+||+|+. .+++.||||++... + .....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 46799999999999999999986 47899999987421 1 11245
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
.++||||+. |+|.+++... ..+++..+..++.||+.||+||| +.+||||||||+|||++.++.+||+|||+|+..
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 789999985 6999998654 45888899999999999999999 899999999999999999999999999999976
Q ss_pred C
Q 035895 507 T 507 (527)
Q Consensus 507 ~ 507 (527)
.
T Consensus 207 ~ 207 (458)
T 3rp9_A 207 D 207 (458)
T ss_dssp T
T ss_pred c
Confidence 4
No 214
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.87 E-value=2e-22 Score=194.17 Aligned_cols=140 Identities=26% Similarity=0.400 Sum_probs=117.3
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeec----------------------------cCccceeEEEEEecc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS----------------------------CSNEDFRALVLEYTT 435 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~----------------------------~~~~~~~~lv~ey~~ 435 (527)
.++|++.+.||+|+||.||+|+..+++.||+|++... +..++..++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 4578999999999999999999988899999997531 233456789999999
Q ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccce
Q 035895 436 NGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515 (527)
Q Consensus 436 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 515 (527)
+|+|.+++......+++.....++.+++.||+||| +++|+||||||+||+++.++.+|++|||+++...... ....
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~ 162 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSS 162 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHST
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-cccc
Confidence 99999999876667889999999999999999999 9999999999999999999999999999998764321 1112
Q ss_pred eccccccccccC
Q 035895 516 TQTLAIIGYMAP 527 (527)
Q Consensus 516 ~~~~~t~~y~aP 527 (527)
....++..|+||
T Consensus 163 ~~~~~~~~y~aP 174 (267)
T 3t9t_A 163 TGTKFPVKWASP 174 (267)
T ss_dssp TSTTCCGGGCCH
T ss_pred ccccccccccCh
Confidence 234467789998
No 215
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.86 E-value=4.1e-22 Score=205.85 Aligned_cols=139 Identities=30% Similarity=0.446 Sum_probs=111.3
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCcc-----ce
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNE-----DF 426 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~-----~~ 426 (527)
.+.|++.+.||+|+||.||+|+. .+++.||||++... +... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46799999999999999999986 56889999997421 1111 45
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
.++||||++ |+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 789999987 5999998653 45889999999999999999999 999999999999999999999999999999976
Q ss_pred CCCCCc--------------------cceeccccccccccC
Q 035895 507 TGEDQS--------------------MTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~--------------------~~~~~~~~t~~y~aP 527 (527)
...... ...+..+||++|+||
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 220 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAP 220 (432)
T ss_dssp -------------------------------CCCCCTTCCH
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCH
Confidence 533211 112456789999998
No 216
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.86 E-value=3.2e-22 Score=202.44 Aligned_cols=139 Identities=26% Similarity=0.456 Sum_probs=103.0
Q ss_pred CccccceeccCCceEEEEEEcc--C--CcEEEEEEEee------------------------------cc-CccceeEEE
Q 035895 386 GFSANNLIGRGSFGSVYKARLQ--D--GMEFAIKVFHF------------------------------SC-SNEDFRALV 430 (527)
Q Consensus 386 ~~~~~~~lg~G~~g~vy~~~~~--~--~~~vavK~~~~------------------------------~~-~~~~~~~lv 430 (527)
.|++.+.||+|+||.||+|+.. + +..||||.+.. .+ ..++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3677899999999999999863 2 24689998642 11 223466899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||+++|+|.+++...+..+++.+...++.|++.||+||| +++|+||||||+||++++++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999876667888899999999999999999 9999999999999999999999999999998764332
Q ss_pred Cc--cceeccccccccccC
Q 035895 511 QS--MTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~--~~~~~~~~t~~y~aP 527 (527)
.. ...+...+|+.|+||
T Consensus 247 ~~~~~~~~~~~~~~~y~aP 265 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMAL 265 (373)
T ss_dssp -----------CCGGGSCH
T ss_pred cccccccCCCCCcccccCh
Confidence 11 122334567889998
No 217
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=9.6e-22 Score=208.17 Aligned_cols=188 Identities=25% Similarity=0.334 Sum_probs=102.3
Q ss_pred CCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEec
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSF 171 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 171 (527)
+|+.|++++|.+++ +|..+. ++|+.|+|++|.|+. +| ..+++|++|+|++|+|++ +|. +.. +|+.|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~---~~L~~L~Ls~N~l~~-ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP---PQITVLEITQNALIS-LP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC---TTCSEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhHc---CCCCEEECcCCCCcc-cc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 66777777777765 344331 356666666666663 33 335666666666666665 333 433 6666666
Q ss_pred cCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccC
Q 035895 172 RGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPL 251 (527)
Q Consensus 172 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~ 251 (527)
++|.+++ +|. .+++|+.|++++|+|++ +|. .+++|++|+|++|+|+.+|. +
T Consensus 128 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l-------------------- 178 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-L-------------------- 178 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-C--------------------
T ss_pred CCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch-h--------------------
Confidence 6666664 343 45566666666666654 333 34556666666666665554 2
Q ss_pred CccccCCCCCCEEEccCCCCCCCChhhhhcCCCC-------CEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCc
Q 035895 252 PSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSL-------QFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 324 (527)
Q Consensus 252 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 324 (527)
. ++|++|+|++|+++ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|++++.+|
T Consensus 179 ----~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 179 ----P--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp ----C--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred ----h--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 2 44555555555544 2333 332 34 55555555555 344444445555555555555555555
Q ss_pred cchhhhc
Q 035895 325 LSLEKLL 331 (527)
Q Consensus 325 ~~~~~l~ 331 (527)
..+..+.
T Consensus 248 ~~l~~l~ 254 (571)
T 3cvr_A 248 ESLSQQT 254 (571)
T ss_dssp HHHHHHH
T ss_pred HHHHHhh
Confidence 5555543
No 218
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.86 E-value=5.5e-22 Score=194.36 Aligned_cols=140 Identities=26% Similarity=0.415 Sum_probs=111.8
Q ss_pred CCccccceeccCCceEEEEEEccC----CcEEEEEEEee------------------------------c-cCccceeEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQD----GMEFAIKVFHF------------------------------S-CSNEDFRAL 429 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~~----~~~vavK~~~~------------------------------~-~~~~~~~~l 429 (527)
..|++.+.||+|+||.||+|+..+ ...||+|.+.. . ...++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 458888999999999999998532 34689998642 1 123456689
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++......+++.++..++.|++.||+||| +++|+||||||+||++++++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999876667889999999999999999999 999999999999999999999999999999876433
Q ss_pred CCc--cceeccccccccccC
Q 035895 510 DQS--MTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~--~~~~~~~~t~~y~aP 527 (527)
... ...+...+|+.|+||
T Consensus 182 ~~~~~~~~~~~~~~~~y~aP 201 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMAL 201 (298)
T ss_dssp GGCBC-----CCBCGGGSCH
T ss_pred chhccccccCCCCCccccCh
Confidence 211 122344567889998
No 219
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.86 E-value=5.5e-22 Score=197.07 Aligned_cols=132 Identities=27% Similarity=0.387 Sum_probs=98.3
Q ss_pred cceeccCCceEEEEEEcc-CCcEEEEEEEee---------------------------ccCccceeEEEEEeccCCcHHH
Q 035895 390 NNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF---------------------------SCSNEDFRALVLEYTTNGSLEK 441 (527)
Q Consensus 390 ~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~---------------------------~~~~~~~~~lv~ey~~~g~L~~ 441 (527)
.+.||+|+||.||+|+.. +++.||||++.. .+..++..++||||+++|+|.+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~ 95 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE 95 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHH
Confidence 378999999999999874 689999999753 1233456789999999999999
Q ss_pred HHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC---cEEEeecccccccCCCCCccceecc
Q 035895 442 VLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI---VAHLSDFGIAKLLTGEDQSMTQTQT 518 (527)
Q Consensus 442 ~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~ 518 (527)
++... ..+++.++..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+++....... .....
T Consensus 96 ~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~ 169 (325)
T 3kn6_A 96 RIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--PLKTP 169 (325)
T ss_dssp HHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------
T ss_pred HHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC--ccccc
Confidence 99764 45789999999999999999999 99999999999999997655 899999999987643322 22234
Q ss_pred ccccccccC
Q 035895 519 LAIIGYMAP 527 (527)
Q Consensus 519 ~~t~~y~aP 527 (527)
.+|++|+||
T Consensus 170 ~~t~~y~aP 178 (325)
T 3kn6_A 170 CFTLHYAAP 178 (325)
T ss_dssp ---------
T ss_pred CCCcCccCH
Confidence 578999998
No 220
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=1.3e-21 Score=181.42 Aligned_cols=178 Identities=23% Similarity=0.289 Sum_probs=97.7
Q ss_pred eEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEE
Q 035895 66 ELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISI 145 (527)
Q Consensus 66 ~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 145 (527)
.++.+++.++.++..+ .++|++|++++|++++..+..+..+. +|++|++++|.+++..+..|..+++|++|
T Consensus 11 ~v~c~~~~l~~~p~~~--------~~~l~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 81 (208)
T 2o6s_A 11 TVECYSQGRTSVPTGI--------PAQTTYLDLETNSLKSLPNGVFDELT-SLTQLYLGGNKLQSLPNGVFNKLTSLTYL 81 (208)
T ss_dssp EEECCSSCCSSCCSCC--------CTTCSEEECCSSCCCCCCTTTTTTCT-TCSEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred EEEecCCCccCCCCCC--------CCCCcEEEcCCCccCcCChhhhcccc-cCcEEECCCCccCccChhhcCCCCCcCEE
Confidence 4455555555443321 24566666666666655444444443 56666666666665555555666666666
Q ss_pred EeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCC
Q 035895 146 DLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELT 225 (527)
Q Consensus 146 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 225 (527)
++++|++++..+..|..+++|+.|++++|++++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|.+.
T Consensus 82 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 82 NLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred ECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 66666666555555556666666666666665544445556666666666666666555555566666666666666543
Q ss_pred CCchhhhCCCCccEEEccCCcccccCCccccCC
Q 035895 226 SIPSILWNLKDILYLDFWSNLFVGPLPSKIGNL 258 (527)
Q Consensus 226 ~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l 258 (527)
. .++.|++|+++.|.+.|.+|..++.+
T Consensus 162 ~------~~~~l~~L~~~~n~~~g~ip~~~~~l 188 (208)
T 2o6s_A 162 C------TCPGIRYLSEWINKHSGVVRNSAGSV 188 (208)
T ss_dssp C------CTTTTHHHHHHHHHCTTTBBCTTSSB
T ss_pred c------CCCCHHHHHHHHHhCCceeeccCccc
Confidence 2 22334444444444444444444433
No 221
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.86 E-value=6.2e-22 Score=197.50 Aligned_cols=137 Identities=28% Similarity=0.377 Sum_probs=114.6
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------------cCccc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------------CSNED 425 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------------~~~~~ 425 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++... +..++
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 45699999999999999999985 57899999987532 12234
Q ss_pred eeEEEEEeccCC-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccc
Q 035895 426 FRALVLEYTTNG-SLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504 (527)
Q Consensus 426 ~~~lv~ey~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~ 504 (527)
..++||||+.+| +|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 567999999777 999998754 35789899999999999999999 9999999999999999999999999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
....... .....||++|+||
T Consensus 179 ~~~~~~~---~~~~~gt~~y~aP 198 (335)
T 3dls_A 179 YLERGKL---FYTFCGTIEYCAP 198 (335)
T ss_dssp ECCTTCC---BCEECSCGGGCCH
T ss_pred ECCCCCc---eeccCCCccccCh
Confidence 7754322 2235689999998
No 222
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.86 E-value=5.4e-22 Score=193.03 Aligned_cols=135 Identities=25% Similarity=0.441 Sum_probs=112.1
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------cCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------CSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------~~~~~~~~lv 430 (527)
.++|++.+.||+|+||.||+|+.. +++.||||++... +..++..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456999999999999999999875 7899999997531 1234567899
Q ss_pred EEeccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC----------------
Q 035895 431 LEYTTNGSLEKVLYSSN---YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---------------- 491 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~---------------- 491 (527)
|||+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++.
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997532 45789999999999999999999 999999999999999984
Q ss_pred ---CCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 492 ---NIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 492 ---~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
...+|++|||.++...... ...+|..|+||
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aP 199 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLAN 199 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC------CCCCCGGGCCH
T ss_pred cCCceEEEEcccccccccCCcc------ccCCCccccCh
Confidence 4489999999998764321 23478889998
No 223
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.86 E-value=5e-22 Score=199.17 Aligned_cols=133 Identities=34% Similarity=0.444 Sum_probs=112.7
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec--------------------------------cCccceeEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS--------------------------------CSNEDFRALVL 431 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~--------------------------------~~~~~~~~lv~ 431 (527)
+.|+..+.||+|+||.||+|+. .+++.||||++... +..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3488899999999999999985 67899999997521 12345678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
||++ |++.+.+......+++.++..++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9998 5888888766667899999999999999999999 899999999999999999999999999999876422
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
....||++|+||
T Consensus 208 ----~~~~gt~~y~aP 219 (348)
T 1u5q_A 208 ----NSFVGTPYWMAP 219 (348)
T ss_dssp ----CCCCSCGGGCCH
T ss_pred ----CcccCCcceeCH
Confidence 234688999998
No 224
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.86 E-value=6.3e-22 Score=201.70 Aligned_cols=144 Identities=17% Similarity=0.260 Sum_probs=116.8
Q ss_pred hhhcCCccccceeccC--CceEEEEEEcc-CCcEEEEEEEeec-------------------------------cCccce
Q 035895 381 LRATDGFSANNLIGRG--SFGSVYKARLQ-DGMEFAIKVFHFS-------------------------------CSNEDF 426 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G--~~g~vy~~~~~-~~~~vavK~~~~~-------------------------------~~~~~~ 426 (527)
....+.|++.+.||+| +||.||+|+.. +++.||||++... +..++.
T Consensus 21 ~~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 100 (389)
T 3gni_B 21 LPEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE 100 (389)
T ss_dssp CCCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred cCCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence 3445679999999999 99999999975 7899999998531 223456
Q ss_pred eEEEEEeccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 427 RALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
.++|||||++|+|.+++... ...+++..+..++.|++.||+||| +++|+||||||+|||++.++.+||+|||.+..
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~ 177 (389)
T 3gni_B 101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLS 177 (389)
T ss_dssp EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEccccccee
Confidence 78999999999999999764 245788899999999999999999 99999999999999999999999999999875
Q ss_pred cCCCCCc-----cceeccccccccccC
Q 035895 506 LTGEDQS-----MTQTQTLAIIGYMAP 527 (527)
Q Consensus 506 ~~~~~~~-----~~~~~~~~t~~y~aP 527 (527)
....... .......||++|+||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~gt~~y~aP 204 (389)
T 3gni_B 178 MISHGQRQRVVHDFPKYSVKVLPWLSP 204 (389)
T ss_dssp CEETTEECSCBCCCCTTCTTTGGGSCH
T ss_pred eccccccccccccccccccccccccCH
Confidence 4322110 111223678899998
No 225
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.86 E-value=1.9e-22 Score=204.31 Aligned_cols=135 Identities=14% Similarity=0.166 Sum_probs=108.6
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeecc----------------------Ccc----------------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFSC----------------------SNE---------------- 424 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~----------------------~~~---------------- 424 (527)
...|+..+.||+|+||.||+|+. .+++.||||++.... .++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 34589999999999999999996 478999999986411 011
Q ss_pred --------------------ceeEEEEEeccCCcHHHHHHhcCCCCCHHHH------HHHHHHHHHHHHHHhcCCCCCeE
Q 035895 425 --------------------DFRALVLEYTTNGSLEKVLYSSNYILDILQR------LNIMIDVTSALEYLHFGYSTPII 478 (527)
Q Consensus 425 --------------------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~------~~i~~~i~~~l~ylH~~~~~~ii 478 (527)
...++|||||+ |+|.+++...+..+++..+ ..++.|++.||+||| +++|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 22689999999 8999999865444455555 678899999999999 99999
Q ss_pred ecCCCCCCeeeCCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 479 HCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 479 Hrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
||||||+|||++.++.+||+|||+|+..... .....+|+.|+||
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aP 260 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPR 260 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcCh
Confidence 9999999999999999999999999876421 1134566899998
No 226
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.86 E-value=3.7e-22 Score=203.84 Aligned_cols=137 Identities=28% Similarity=0.447 Sum_probs=113.3
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec------------------------------cC--ccceeEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS------------------------------CS--NEDFRALVL 431 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~------------------------------~~--~~~~~~lv~ 431 (527)
+.|++.+.||+|+||.||+|+.. +|+.||||++... +. .....++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46899999999999999999865 5899999997531 11 122568999
Q ss_pred EeccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----CCCCcEEEeecccccc
Q 035895 432 EYTTNGSLEKVLYSSNY--ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL----DDNIVAHLSDFGIAKL 505 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill----~~~~~~kl~Dfg~a~~ 505 (527)
|||++|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+|+.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 99999999999975432 3889999999999999999999 9999999999999999 7788899999999987
Q ss_pred cCCCCCccceeccccccccccC
Q 035895 506 LTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 506 ~~~~~~~~~~~~~~~t~~y~aP 527 (527)
...... .....||..|+||
T Consensus 166 ~~~~~~---~~~~~gt~~y~aP 184 (396)
T 4eut_A 166 LEDDEQ---FVSLYGTEEYLHP 184 (396)
T ss_dssp CCCGGG---SSCSSSCCTTCCH
T ss_pred ccCCCc---cccccCCccccCH
Confidence 653321 2235688999998
No 227
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.86 E-value=7.1e-22 Score=205.13 Aligned_cols=137 Identities=29% Similarity=0.407 Sum_probs=112.3
Q ss_pred hhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec---------------------------cC-ccceeEEEEEe
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS---------------------------CS-NEDFRALVLEY 433 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~---------------------------~~-~~~~~~lv~ey 433 (527)
...++|++.+.||+|+||.||+|... ++.||||+++.. +. .+...++||||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCTTSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred cChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCchHHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 34567899999999999999999875 779999997531 11 22367899999
Q ss_pred ccCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 035895 434 TTNGSLEKVLYSSNY-ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~ 512 (527)
+++|+|.+++...+. .+++.....++.|++.||+||| +++|+||||||+|||+++++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 999999999986543 3688889999999999999999 999999999999999999999999999999865321
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
.....+++.|+||
T Consensus 343 --~~~~~~~~~y~aP 355 (450)
T 1k9a_A 343 --QDTGKLPVKWTAP 355 (450)
T ss_dssp ------CCCTTTSCH
T ss_pred --ccCCCCCcceeCH
Confidence 1123467889998
No 228
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.86 E-value=1e-21 Score=198.36 Aligned_cols=137 Identities=32% Similarity=0.521 Sum_probs=115.7
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------------cCcc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------------CSNE 424 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------------~~~~ 424 (527)
.++|++.+.||+|+||.||+|+.. +|+.||||+++.. +...
T Consensus 93 ~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 172 (365)
T 2y7j_A 93 YQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS 172 (365)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred hhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence 466999999999999999999975 7999999987421 1123
Q ss_pred ceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccc
Q 035895 425 DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504 (527)
Q Consensus 425 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~ 504 (527)
+..++||||++||+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+++
T Consensus 173 ~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~ 248 (365)
T 2y7j_A 173 SFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSC 248 (365)
T ss_dssp SEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCccc
Confidence 4568999999999999998754 35788899999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.+..... .....||+.|+||
T Consensus 249 ~~~~~~~---~~~~~gt~~y~aP 268 (365)
T 2y7j_A 249 HLEPGEK---LRELCGTPGYLAP 268 (365)
T ss_dssp ECCTTCC---BCCCCSCGGGCCH
T ss_pred ccCCCcc---cccCCCCCCccCh
Confidence 7754322 2335689999998
No 229
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.86 E-value=6.4e-23 Score=201.31 Aligned_cols=140 Identities=26% Similarity=0.431 Sum_probs=102.7
Q ss_pred CCccccceeccCCceEEEEEEccCCcEEEEEEEeec----------------------------cCccc----eeEEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS----------------------------CSNED----FRALVLE 432 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~----------------------------~~~~~----~~~lv~e 432 (527)
+.|++.+.||+|+||.||+|+.. ++.||||++... +.... ..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 81 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccchhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEe
Confidence 56899999999999999999875 889999997421 11112 5689999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG-----YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~-----~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
|+++|+|.+++... .+++..+..++.+++.|++|+|.. ++++|+||||||+||+++.++.+||+|||+|+...
T Consensus 82 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~ 159 (303)
T 3gxj_A 82 YHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEE
T ss_pred ccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceecc
Confidence 99999999999654 456677888999999999999932 27899999999999999999999999999998765
Q ss_pred CCCCcc--ceeccccccccccC
Q 035895 508 GEDQSM--TQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~--~~~~~~~t~~y~aP 527 (527)
...... ......||+.|+||
T Consensus 160 ~~~~~~~~~~~~~~gt~~y~aP 181 (303)
T 3gxj_A 160 SATDTIDIAPNHRVGTKRYMAP 181 (303)
T ss_dssp TTTTEESCC-----CCGGGCCH
T ss_pred CCCcccccccCCCCcCccccCH
Confidence 432211 12234689999998
No 230
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.86 E-value=8.3e-22 Score=191.21 Aligned_cols=137 Identities=29% Similarity=0.460 Sum_probs=112.0
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee--------------------------------ccCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF--------------------------------SCSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~--------------------------------~~~~~~~~~l 429 (527)
+.++|++.+.||+|+||.||+|+. .+++.||+|++.. .+...+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 457799999999999999999986 4678999998742 1223456789
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++... ..+++..+..++.+++.|++||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp EECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 99999999999998754 35788889999999999999999 999999999999999999999999999998765322
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
. .....+|+.|+||
T Consensus 163 ~----~~~~~~~~~y~aP 176 (279)
T 3fdn_A 163 R----RTDLCGTLDYLPP 176 (279)
T ss_dssp ---------CCCCTTCCH
T ss_pred c----ccccCCCCCccCH
Confidence 1 2234678899998
No 231
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.86 E-value=2.3e-22 Score=208.95 Aligned_cols=142 Identities=25% Similarity=0.433 Sum_probs=111.2
Q ss_pred hhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeecc---------------------------CccceeEEEEEec
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFSC---------------------------SNEDFRALVLEYT 434 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~---------------------------~~~~~~~lv~ey~ 434 (527)
...++|++.+.||+|+||.||+|+...+..||||+++... ..++..++||||+
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~ 260 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 260 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhh
Confidence 3456788999999999999999999888889999975311 1224568999999
Q ss_pred cCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 035895 435 TNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513 (527)
Q Consensus 435 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~ 513 (527)
++|+|.+++... +..+++.+...++.|++.||+||| +++|+||||||+|||+++++.+||+|||+++...... ..
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~ 336 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 336 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-ee
Confidence 999999999753 245788899999999999999999 9999999999999999999999999999998765322 11
Q ss_pred ceeccccccccccC
Q 035895 514 TQTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~~~~~~~t~~y~aP 527 (527)
......+++.|+||
T Consensus 337 ~~~~~~~~~~y~aP 350 (452)
T 1fmk_A 337 ARQGAKFPIKWTAP 350 (452)
T ss_dssp ------CCGGGSCH
T ss_pred cccCCcccccccCH
Confidence 22234467889998
No 232
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.86 E-value=8.5e-22 Score=197.85 Aligned_cols=140 Identities=25% Similarity=0.411 Sum_probs=114.4
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeecc-------------------------------Cc--------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFSC-------------------------------SN-------- 423 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~-------------------------------~~-------- 423 (527)
.+.|++.+.||+|+||.||+|+. .+|+.||||++.... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46799999999999999999987 578999999863210 01
Q ss_pred cceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 035895 424 EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIA 503 (527)
Q Consensus 424 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a 503 (527)
.+..++||||+++ +|.+.+......+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 2356899999985 888888766667899999999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCC--ccceeccccccccccC
Q 035895 504 KLLTGEDQ--SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 504 ~~~~~~~~--~~~~~~~~~t~~y~aP 527 (527)
+.+..... ........+|++|+||
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPP 197 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCH
T ss_pred ccccccccccccccCCcccccCccCc
Confidence 87643221 1122345679999998
No 233
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.86 E-value=4.4e-22 Score=198.31 Aligned_cols=144 Identities=24% Similarity=0.380 Sum_probs=115.6
Q ss_pred hhhcCCccccceeccCCceEEEEEEcc-C-----CcEEEEEEEee-------------------------------ccCc
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARLQ-D-----GMEFAIKVFHF-------------------------------SCSN 423 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~~-~-----~~~vavK~~~~-------------------------------~~~~ 423 (527)
....++|++.+.||+|+||.||+|+.. + ...||+|++.. .+..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 344578999999999999999999853 2 34799998742 1233
Q ss_pred cceeEEEEEeccCCcHHHHHHhc-------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC
Q 035895 424 EDFRALVLEYTTNGSLEKVLYSS-------------NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD 490 (527)
Q Consensus 424 ~~~~~lv~ey~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~ 490 (527)
.+..++||||+++|+|.+++... ...+++.....++.|++.||+||| +++|+||||||+||+++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEEC
Confidence 45678999999999999998753 234688899999999999999999 89999999999999999
Q ss_pred CCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 491 DNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 491 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.++.+||+|||+++...............+|+.|+||
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 235 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAP 235 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCH
T ss_pred CCCeEEECccccccccccccceeecCCCCCCccccCH
Confidence 9999999999999876543322222334567889998
No 234
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.86 E-value=2.7e-22 Score=195.54 Aligned_cols=144 Identities=26% Similarity=0.444 Sum_probs=118.7
Q ss_pred HhhhcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee----------------------------ccCccceeEEE
Q 035895 380 LLRATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF----------------------------SCSNEDFRALV 430 (527)
Q Consensus 380 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~----------------------------~~~~~~~~~lv 430 (527)
+....++|++.+.||+|+||.||+|+.. +++.||+|++.. .+..++..++|
T Consensus 8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 3445677999999999999999999875 588999999743 12345567899
Q ss_pred EEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 431 LEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
|||+++|+|.+++.... ..+++..+..++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 99999999999997643 45789899999999999999999 899999999999999999999999999999877543
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
.. .......+|+.|+||
T Consensus 165 ~~-~~~~~~~~~~~y~aP 181 (288)
T 3kfa_A 165 TY-TAHAGAKFPIKWTAP 181 (288)
T ss_dssp SS-EEETTEEECGGGCCH
T ss_pred cc-ccccCCccccCcCCh
Confidence 22 222334567889998
No 235
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=2.4e-21 Score=179.55 Aligned_cols=180 Identities=24% Similarity=0.305 Sum_probs=91.1
Q ss_pred CEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccC
Q 035895 94 KKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRG 173 (527)
Q Consensus 94 ~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 173 (527)
+.++.+++.++.+ |..+ ..+|++|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|++|++++
T Consensus 10 ~~v~c~~~~l~~~-p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 10 TTVECYSQGRTSV-PTGI---PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp TEEECCSSCCSSC-CSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCccCC-CCCC---CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 4555555555542 2221 22455555555555544444455555555555555555544444444555555555555
Q ss_pred cccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCc
Q 035895 174 NELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPS 253 (527)
Q Consensus 174 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~ 253 (527)
|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|+++++| +.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-----------------------~~ 142 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVP-----------------------DG 142 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC-----------------------TT
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeC-----------------------HH
Confidence 5554433334444455555555555554444444444444444444444444433 23
Q ss_pred cccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCC
Q 035895 254 KIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLV 307 (527)
Q Consensus 254 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 307 (527)
.+..+++|++|++++|.+.+. +++|++|+++.|+++|.+|..++.++
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred HhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCceeeccCcccc
Confidence 344555566666666655432 33556666666666666666655544
No 236
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.86 E-value=9.4e-22 Score=193.94 Aligned_cols=138 Identities=30% Similarity=0.404 Sum_probs=109.5
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-------------------------------cCccceeEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-------------------------------CSNEDFRALVL 431 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-------------------------------~~~~~~~~lv~ 431 (527)
.++|++.+.||+|+||.||+|+.. +|+.||||++... +..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 367999999999999999999874 5899999987321 22345678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
||+++++|.+++... ..+++.....++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 e~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp ECCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred EeCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 999999999887643 45788899999999999999999 99999999999999999999999999999987653322
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
......+|.+|+||
T Consensus 158 --~~~~~~~~~~y~aP 171 (311)
T 4agu_A 158 --YYDDEVATRWYRSP 171 (311)
T ss_dssp ----------GGGCCH
T ss_pred --ccCCCcCCccccCh
Confidence 12234678899998
No 237
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.86 E-value=5.2e-22 Score=197.39 Aligned_cols=141 Identities=25% Similarity=0.385 Sum_probs=105.8
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcE----EEEEEEeecc-----------------------------CccceeEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGME----FAIKVFHFSC-----------------------------SNEDFRAL 429 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~----vavK~~~~~~-----------------------------~~~~~~~l 429 (527)
.++|++.+.||+|+||.||+|+. .+++. ||+|.+.... ...+..++
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 93 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL 93 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceE
Confidence 46799999999999999999985 34554 4677653210 01234578
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++......+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999999999877677899999999999999999999 999999999999999999999999999999877543
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
..........+|+.|+||
T Consensus 171 ~~~~~~~~~~~t~~y~aP 188 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMAL 188 (327)
T ss_dssp ---------CCCGGGSCH
T ss_pred cccccccCCCccccccCH
Confidence 333333344567889998
No 238
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.86 E-value=8e-22 Score=196.58 Aligned_cols=141 Identities=28% Similarity=0.509 Sum_probs=108.0
Q ss_pred cCCccccceeccCCceEEEEEEccC-----CcEEEEEEEeec------------------------------cCccceeE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQD-----GMEFAIKVFHFS------------------------------CSNEDFRA 428 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~-----~~~vavK~~~~~------------------------------~~~~~~~~ 428 (527)
.+.|+..+.||+|+||.||+|+... +..||||+++.. +...+..+
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 3467888999999999999998642 246999997531 23345678
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
+||||+++|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 999999999999999876667899999999999999999999 89999999999999999999999999999987653
Q ss_pred CCCc-cceeccccccccccC
Q 035895 509 EDQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~-~~~~~~~~t~~y~aP 527 (527)
.... .......+|+.|+||
T Consensus 200 ~~~~~~~~~~~~~~~~y~aP 219 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAP 219 (333)
T ss_dssp -----------CCCGGGSCH
T ss_pred ccccccccCCCCccccccCc
Confidence 3211 112233457789998
No 239
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.86 E-value=3.1e-22 Score=200.61 Aligned_cols=138 Identities=22% Similarity=0.303 Sum_probs=107.0
Q ss_pred CCccccceeccCCceEEEEEEcc----CCcEEEEEEEeecc---------------------------------------
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSC--------------------------------------- 421 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~--------------------------------------- 421 (527)
++|++.+.||+|+||.||+|+.. ++..||||++....
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56999999999999999999975 57889999875310
Q ss_pred -C----ccceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC--c
Q 035895 422 -S----NEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI--V 494 (527)
Q Consensus 422 -~----~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~--~ 494 (527)
. .....++||||+ +|+|.+++...+ .+++.++..++.|++.||+||| +++|+||||||+||+++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence 0 145678999999 999999987544 6899999999999999999999 89999999999999998777 9
Q ss_pred EEEeecccccccCCCCCc-----cceeccccccccccC
Q 035895 495 AHLSDFGIAKLLTGEDQS-----MTQTQTLAIIGYMAP 527 (527)
Q Consensus 495 ~kl~Dfg~a~~~~~~~~~-----~~~~~~~~t~~y~aP 527 (527)
+||+|||+|+.+...... .......||+.|+||
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 229 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSL 229 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCH
Confidence 999999999876432111 111334689999998
No 240
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.86 E-value=4.5e-22 Score=198.90 Aligned_cols=140 Identities=29% Similarity=0.353 Sum_probs=115.4
Q ss_pred hhhcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccceeE
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNEDFRA 428 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~~~~ 428 (527)
....++|++.+.||+|+||.||+|+. .+|+.||||+++.. +..++..+
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~ 126 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW 126 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence 34467899999999999999999985 57899999997431 22345678
Q ss_pred EEEEeccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCeeeCCCCcEEEeeccccc
Q 035895 429 LVLEYTTNGSLEKVLYS---SNYILDILQRLNIMIDVTSALEYLHFGYST-PIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrdlk~~nill~~~~~~kl~Dfg~a~ 504 (527)
+||||+++ +|.+++.. .+..+++..+..++.|++.||+||| ++ +|+||||||+||+++.++.+||+|||+++
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 99999986 99888764 3457899999999999999999999 76 99999999999999999999999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
...... ......||++|+||
T Consensus 203 ~~~~~~---~~~~~~gt~~y~aP 222 (340)
T 3an0_A 203 YLVDSV---AKTIDAGCKPYMAP 222 (340)
T ss_dssp HHSCHH---HHHHSSCCCCCCCH
T ss_pred eccccc---ccccCCCCccccCc
Confidence 764321 12234688899998
No 241
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.86 E-value=6.7e-22 Score=198.24 Aligned_cols=139 Identities=32% Similarity=0.496 Sum_probs=111.3
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec----------------------------------cCcccee
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS----------------------------------CSNEDFR 427 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~----------------------------------~~~~~~~ 427 (527)
..+.|++.+.||+|+||.||+|+.. +|+.||||++... +...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4577999999999999999999974 6899999987421 1234456
Q ss_pred EEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
++||||+++ +|.+++......+++.+...++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 899999986 899988766666788888999999999999999 9999999999999999999999999999998764
Q ss_pred CCCCccceeccccccccccC
Q 035895 508 GEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~~~~~~~~t~~y~aP 527 (527)
.... ..+...+|++|+||
T Consensus 164 ~~~~--~~~~~~~t~~y~aP 181 (346)
T 1ua2_A 164 SPNR--AYTHQVVTRWYRAP 181 (346)
T ss_dssp SCCC--CCCCSCCCCTTCCH
T ss_pred CCcc--cCCcccccccccCc
Confidence 3322 22335678999998
No 242
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.86 E-value=1e-21 Score=192.51 Aligned_cols=141 Identities=30% Similarity=0.454 Sum_probs=111.1
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec----------------------------c-------------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS----------------------------C------------- 421 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~----------------------------~------------- 421 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++... +
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 35699999999999999999986 57899999987421 0
Q ss_pred CccceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 035895 422 SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501 (527)
Q Consensus 422 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg 501 (527)
...+..++||||+++|+|.+++...+..+++.+...++.|++.||+||| +++|+||||||+||+++.++.+|++|||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 1134568999999999999999876666788888999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCCC------------ccceeccccccccccC
Q 035895 502 IAKLLTGEDQ------------SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 502 ~a~~~~~~~~------------~~~~~~~~~t~~y~aP 527 (527)
+++....... ........+|..|+||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aP 199 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT 199 (303)
T ss_dssp CCSCTTC-------------------------CTTSCH
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCc
Confidence 9987642210 0111234578889998
No 243
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.86 E-value=5.4e-22 Score=193.50 Aligned_cols=138 Identities=28% Similarity=0.367 Sum_probs=105.3
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccceeEEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNEDFRALV 430 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~~~~lv 430 (527)
..++|++.+.||+|+||.||+|+. .+++.||||++... +..++..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 356799999999999999999986 57899999987421 2234567899
Q ss_pred EEeccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 431 LEYTTNGSLEKVLYS---SNYILDILQRLNIMIDVTSALEYLHFGYST-PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
|||+++ +|.+++.. .+..+++..+..++.|++.||+||| ++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 999985 88777654 3456899999999999999999999 87 9999999999999999999999999999876
Q ss_pred CCCCCccceeccccccccccC
Q 035895 507 TGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~~~~~~~~t~~y~aP 527 (527)
..... .....+|++|+||
T Consensus 161 ~~~~~---~~~~~~t~~y~aP 178 (290)
T 3fme_A 161 VDDVA---KDIDAGCKPYMAP 178 (290)
T ss_dssp ------------CCCCCCSCH
T ss_pred ccccc---ccccCCCccccCh
Confidence 53321 2234578899998
No 244
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.86 E-value=5.6e-22 Score=191.94 Aligned_cols=140 Identities=24% Similarity=0.396 Sum_probs=115.1
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec------------------------------cCccceeEEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS------------------------------CSNEDFRALVLE 432 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~------------------------------~~~~~~~~lv~e 432 (527)
.++|++.+.||+|+||.||+|+.. +++.||||++... +..++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467999999999999999999865 7899999997531 122345689999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~ 512 (527)
|+++|+|.+++... ..+++.+...++.|++.||+||| +.+|+||||||+||+++.++.+|++|||.++........
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999988543 45788899999999999999999 899999999999999999999999999999876432221
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
.......+|..|+||
T Consensus 162 ~~~~~~~~~~~y~aP 176 (276)
T 2yex_A 162 RLLNKMCGTLPYVAP 176 (276)
T ss_dssp CCBCCCCSCGGGCCG
T ss_pred hcccCCccccCccCh
Confidence 122345678899998
No 245
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.86 E-value=6.5e-22 Score=200.72 Aligned_cols=134 Identities=19% Similarity=0.218 Sum_probs=107.4
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec--------------------c---Ccc---------------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS--------------------C---SNE--------------- 424 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~--------------------~---~~~--------------- 424 (527)
.+.|++.+.||+|+||+||+|+. .+|+.||||++... . .++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46688999999999999999996 56899999997521 0 000
Q ss_pred ----------------c-----eeEEEEEeccCCcHHHHHHhcCCC------CCHHHHHHHHHHHHHHHHHHhcCCCCCe
Q 035895 425 ----------------D-----FRALVLEYTTNGSLEKVLYSSNYI------LDILQRLNIMIDVTSALEYLHFGYSTPI 477 (527)
Q Consensus 425 ----------------~-----~~~lv~ey~~~g~L~~~l~~~~~~------~~~~~~~~i~~~i~~~l~ylH~~~~~~i 477 (527)
+ ..++||||+ +|+|.+++...+.. +++..+..|+.||+.||+||| +++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 0 267999999 68999999754322 225777889999999999999 8999
Q ss_pred EecCCCCCCeeeCCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 478 IHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 478 iHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+||||||+|||++.++.+||+|||+|+.... ......| ++|+||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aP 271 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPP 271 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccCh
Confidence 9999999999999999999999999986432 1233456 889998
No 246
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.86 E-value=1.8e-21 Score=197.94 Aligned_cols=139 Identities=29% Similarity=0.428 Sum_probs=110.5
Q ss_pred hhcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------c--------------
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------C-------------- 421 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------~-------------- 421 (527)
...+.|++.+.||+|+||+||+|+. .+|+.||||++... +
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcchHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 3467899999999999999999985 67899999987421 0
Q ss_pred ------------------------CccceeEEEEEeccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 035895 422 ------------------------SNEDFRALVLEYTTNGSLEKVLYS---SNYILDILQRLNIMIDVTSALEYLHFGYS 474 (527)
Q Consensus 422 ------------------------~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~ylH~~~~ 474 (527)
..+...++||||+++ +|.+.+.. .+..+++..+..++.|+++||+||| +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~ 159 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH---S 159 (383)
T ss_dssp --------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---T
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---H
Confidence 112236799999984 88777753 3456889999999999999999999 9
Q ss_pred CCeEecCCCCCCeeeC-CCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 475 TPIIHCDLKPHNKLLD-DNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 475 ~~iiHrdlk~~nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.+|+||||||+||+++ .++.+||+|||+|+....... .....+|.+|+||
T Consensus 160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aP 210 (383)
T 3eb0_A 160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAP 210 (383)
T ss_dssp TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCH
T ss_pred CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCH
Confidence 9999999999999998 689999999999997653322 2234578889998
No 247
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.85 E-value=1.6e-21 Score=192.65 Aligned_cols=139 Identities=26% Similarity=0.363 Sum_probs=107.5
Q ss_pred CCcccc-ceeccCCceEEEEEEc-cCCcEEEEEEEeec------------------------------cCccceeEEEEE
Q 035895 385 DGFSAN-NLIGRGSFGSVYKARL-QDGMEFAIKVFHFS------------------------------CSNEDFRALVLE 432 (527)
Q Consensus 385 ~~~~~~-~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~------------------------------~~~~~~~~lv~e 432 (527)
+.|++. +.||+|+||.||+|+. .+++.||||++... +..++..++|||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 457774 7899999999999985 57899999998531 123356689999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc---EEEeecccccccCCC
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV---AHLSDFGIAKLLTGE 509 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~---~kl~Dfg~a~~~~~~ 509 (527)
|+++|+|.+++... ..+++.++..++.|++.||+||| +++|+||||||+||+++.++. +||+|||+++.....
T Consensus 92 ~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 92 KMRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred cCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999999764 35788889999999999999999 899999999999999987765 999999999865422
Q ss_pred CCc-----cceeccccccccccC
Q 035895 510 DQS-----MTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~-----~~~~~~~~t~~y~aP 527 (527)
... .......||+.|+||
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aP 190 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAP 190 (316)
T ss_dssp --------------CCSGGGCCH
T ss_pred CccccccccccccccCCcCccCh
Confidence 110 111234588999998
No 248
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.85 E-value=3.8e-22 Score=194.58 Aligned_cols=135 Identities=26% Similarity=0.417 Sum_probs=112.2
Q ss_pred cCCccccceeccCCceEEEEEEccC-C-------cEEEEEEEee-----------------------------ccCccce
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQD-G-------MEFAIKVFHF-----------------------------SCSNEDF 426 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~-~-------~~vavK~~~~-----------------------------~~~~~~~ 426 (527)
.++|++.+.||+|+||.||+|+... + ..||+|++.. .+..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 3568999999999999999998642 3 4799998742 1233456
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc--------EEEe
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV--------AHLS 498 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~--------~kl~ 498 (527)
.++||||+++|+|.+++...+..+++..+..++.|++.||+||| +++|+||||||+||+++.++. +|++
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeec
Confidence 68999999999999999876666899999999999999999999 999999999999999998876 9999
Q ss_pred ecccccccCCCCCccceeccccccccccC
Q 035895 499 DFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 499 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|||+++..... ....+|++|+||
T Consensus 164 Dfg~~~~~~~~------~~~~~~~~y~aP 186 (289)
T 4fvq_A 164 DPGISITVLPK------DILQERIPWVPP 186 (289)
T ss_dssp CCCSCTTTSCH------HHHHHTTTTSCH
T ss_pred cCcccccccCc------cccCCcCcccCH
Confidence 99999765321 123467889998
No 249
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=8.9e-22 Score=208.43 Aligned_cols=188 Identities=24% Similarity=0.342 Sum_probs=148.7
Q ss_pred ccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCC
Q 035895 63 IVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDL 142 (527)
Q Consensus 63 ~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 142 (527)
.++.|+|++|.|++++..+ +++|++|+|++|+|+. +| ...++|+.|+|++|.|++ +|. +.. +|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l--------~~~L~~L~Ls~N~l~~-ip----~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L 122 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNL--------PPQITVLEITQNALIS-LP----ELPASLEYLDACDNRLST-LPE-LPA--SL 122 (571)
T ss_dssp TCSEEECCSSCCSCCCSCC--------CTTCSEEECCSSCCSC-CC----CCCTTCCEEECCSSCCSC-CCC-CCT--TC
T ss_pred CccEEEeCCCCCCccCHhH--------cCCCCEEECcCCCCcc-cc----cccCCCCEEEccCCCCCC-cch-hhc--CC
Confidence 5789999999999876543 2689999999999995 56 224589999999999997 555 655 99
Q ss_pred cEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCC
Q 035895 143 ISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSN 222 (527)
Q Consensus 143 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 222 (527)
++|+|++|++++ +|. .+++|+.|++++|.+++ +|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|
T Consensus 123 ~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N 190 (571)
T 3cvr_A 123 KHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTN 190 (571)
T ss_dssp CEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSS
T ss_pred CEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCC
Confidence 999999999998 444 68999999999999996 665 67899999999999997 566 66 89999999999
Q ss_pred CCCCCchhhhCCCCc-------cEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCC
Q 035895 223 ELTSIPSILWNLKDI-------LYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLK 283 (527)
Q Consensus 223 ~l~~lp~~~~~l~~L-------~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 283 (527)
+|+.+|. +.. +| +.|++++|.+. .+|..+..+++|++|+|++|.+++.+|..+..+.
T Consensus 191 ~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 191 LLESLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CCSSCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHH
T ss_pred CCCchhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhh
Confidence 9999987 443 55 67777777666 3566666677777777777777666666665543
No 250
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.85 E-value=9.7e-22 Score=204.62 Aligned_cols=135 Identities=26% Similarity=0.275 Sum_probs=105.1
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cC------cc
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CS------NE 424 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~------~~ 424 (527)
..+.|++.+.||+|+||+||+|+. .+++.||||++... +. ..
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 357899999999999999999985 56899999998521 00 11
Q ss_pred ceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccc
Q 035895 425 DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504 (527)
Q Consensus 425 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~ 504 (527)
...++||||+++ ++.+.+.. .+++.++..++.|++.||+||| +++|+||||||+|||++.++.+||+|||+|+
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred CeEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 346899999986 46666632 4788889999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
...... ..+..+||++|+||
T Consensus 213 ~~~~~~---~~~~~~gt~~y~aP 232 (464)
T 3ttj_A 213 TAGTSF---MMTPYVVTRYYRAP 232 (464)
T ss_dssp ----CC---CC----CCCTTCCH
T ss_pred ecCCCc---ccCCCcccccccCH
Confidence 765322 22346789999998
No 251
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.85 E-value=7.2e-22 Score=198.49 Aligned_cols=139 Identities=19% Similarity=0.288 Sum_probs=112.7
Q ss_pred CCccccceeccCCceEEEEEEcc---------CCcEEEEEEEeec-----------------------------------
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ---------DGMEFAIKVFHFS----------------------------------- 420 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~---------~~~~vavK~~~~~----------------------------------- 420 (527)
++|++.+.||+|+||.||+|+.. +++.||||++...
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 57999999999999999999875 3789999997421
Q ss_pred ----c-CccceeEEEEEeccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC-
Q 035895 421 ----C-SNEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI- 493 (527)
Q Consensus 421 ----~-~~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~- 493 (527)
+ ..++..++||||+ +|+|.+++... +..+++.++..++.|++.||+||| +++|+||||||+||+++.++
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~~~~~ 197 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVDPEDQ 197 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEETTEE
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEcCCCC
Confidence 0 1246778999999 99999999865 356899999999999999999999 89999999999999999988
Q ss_pred -cEEEeecccccccCCCCCc-----cceeccccccccccC
Q 035895 494 -VAHLSDFGIAKLLTGEDQS-----MTQTQTLAIIGYMAP 527 (527)
Q Consensus 494 -~~kl~Dfg~a~~~~~~~~~-----~~~~~~~~t~~y~aP 527 (527)
.+||+|||+++.+...... .......||+.|+||
T Consensus 198 ~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 237 (352)
T 2jii_A 198 SQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISM 237 (352)
T ss_dssp EEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCH
T ss_pred ceEEEecCcceeeccCCCccccccccccccccCCccccCH
Confidence 9999999999876532211 111234688999998
No 252
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.85 E-value=2.2e-21 Score=189.00 Aligned_cols=136 Identities=28% Similarity=0.441 Sum_probs=112.9
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeeccC----------------------------------ccceeE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFSCS----------------------------------NEDFRA 428 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~~----------------------------------~~~~~~ 428 (527)
.++|++.+.||+|+||.||+|+. .+++.||+|++..... ..+..+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR 97 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTE
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCe
Confidence 46799999999999999999986 5789999999742110 012236
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeeCCCCc-----EEEeecc
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP--IIHCDLKPHNKLLDDNIV-----AHLSDFG 501 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~--iiHrdlk~~nill~~~~~-----~kl~Dfg 501 (527)
+||||+++|+|.+.+......+++..+..++.|++.|++||| +++ |+||||||+||+++.++. +||+|||
T Consensus 98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred EEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 999999999999999877677899999999999999999999 888 999999999999987776 9999999
Q ss_pred cccccCCCCCccceeccccccccccC
Q 035895 502 IAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 502 ~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+++..... .....+|+.|+||
T Consensus 175 ~~~~~~~~-----~~~~~g~~~y~aP 195 (287)
T 4f0f_A 175 LSQQSVHS-----VSGLLGNFQWMAP 195 (287)
T ss_dssp TCBCCSSC-----EECCCCCCTTSCG
T ss_pred cccccccc-----ccccCCCccccCc
Confidence 99854321 2335688899998
No 253
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.85 E-value=2.3e-21 Score=197.00 Aligned_cols=138 Identities=30% Similarity=0.362 Sum_probs=112.5
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec----------------------------------cCcccee
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS----------------------------------CSNEDFR 427 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~----------------------------------~~~~~~~ 427 (527)
..++|++.+.||+|+||+||+|+.. +++.||||++... +..++..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 3578999999999999999999864 6889999997421 1123566
Q ss_pred EEEEEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC--CCCcEEEeeccccc
Q 035895 428 ALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD--DNIVAHLSDFGIAK 504 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~--~~~~~kl~Dfg~a~ 504 (527)
++||||++ |+|.+++.... ..+++..+..++.|++.||+||| .+..+||||||||+|||++ .++.+||+|||+|+
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH-~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLA-TPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHT-STTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhc-cCCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 79999996 59999997654 45889999999999999999999 2357899999999999995 57889999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
..... .....+|+.|+||
T Consensus 210 ~~~~~-----~~~~~~t~~y~aP 227 (382)
T 2vx3_A 210 QLGQR-----IYQYIQSRFYRSP 227 (382)
T ss_dssp ETTCC-----CCSSCSCGGGCCH
T ss_pred ecccc-----cccccCCccccCh
Confidence 76432 1235678899998
No 254
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.85 E-value=1e-21 Score=190.87 Aligned_cols=137 Identities=31% Similarity=0.570 Sum_probs=114.5
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeecc-----------------------------------------C
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFSC-----------------------------------------S 422 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~~-----------------------------------------~ 422 (527)
++|+..+.||+|+||.||+|+.. +++.||+|++.... .
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 90 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence 45899999999999999999975 78999999975310 0
Q ss_pred ccceeEEEEEeccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 035895 423 NEDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501 (527)
Q Consensus 423 ~~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg 501 (527)
.....++||||+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 167 (284)
T 2a19_B 91 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFG 167 (284)
T ss_dssp EEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEECcch
Confidence 123468999999999999999754 346889999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCCCccceeccccccccccC
Q 035895 502 IAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 502 ~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+++....... .....+|+.|+||
T Consensus 168 ~~~~~~~~~~---~~~~~~~~~y~aP 190 (284)
T 2a19_B 168 LVTSLKNDGK---RTRSKGTLRYMSP 190 (284)
T ss_dssp TCEESSCCSC---CCCCCSCCTTSCH
T ss_pred hheecccccc---ccccCCcccccCh
Confidence 9987754321 2234578899998
No 255
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.85 E-value=1e-21 Score=202.06 Aligned_cols=137 Identities=26% Similarity=0.348 Sum_probs=107.4
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeecc------------------------------------Cccce
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFSC------------------------------------SNEDF 426 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~------------------------------------~~~~~ 426 (527)
.+.|.+.+.||+|+||.||+|.. .+++.||||++.... ...+.
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 213 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 213 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESSE
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecCc
Confidence 46799999999999999999986 568999999975310 01234
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC---CcEEEeecccc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDN---IVAHLSDFGIA 503 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~---~~~kl~Dfg~a 503 (527)
.++||||+++|+|.+++... ..+++.++..++.|++.||+||| +++|+||||||+||+++.+ +.+||+|||+|
T Consensus 214 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 214 YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred eEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecccc
Confidence 57999999999999887643 45789999999999999999999 8999999999999999644 46999999999
Q ss_pred cccCCCCCccceeccccccccccC
Q 035895 504 KLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 504 ~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+...... ......||++||||
T Consensus 290 ~~~~~~~---~~~~~~gt~~y~aP 310 (419)
T 3i6u_A 290 KILGETS---LMRTLCGTPTYLAP 310 (419)
T ss_dssp TSCC--------------CTTCCT
T ss_pred eecCCCc---cccccCCCCCccCc
Confidence 9765322 12335689999999
No 256
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.85 E-value=1.5e-21 Score=194.03 Aligned_cols=141 Identities=27% Similarity=0.436 Sum_probs=114.8
Q ss_pred cCCccccceeccCCceEEEEEEc-----cCCcEEEEEEEeec-----------------------------cCc--ccee
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-----QDGMEFAIKVFHFS-----------------------------CSN--EDFR 427 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~-----------------------------~~~--~~~~ 427 (527)
.+.|++.+.||+|+||.||+|+. .+++.||||++... +.. ....
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 35688999999999999999983 46899999997421 111 2256
Q ss_pred EEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
++||||+++|+|.+++...+..+++.++..++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 8999999999999999877667899999999999999999999 8999999999999999999999999999998875
Q ss_pred CCCCcc-ceeccccccccccC
Q 035895 508 GEDQSM-TQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~-~~~~~~~t~~y~aP 527 (527)
...... ......++..|+||
T Consensus 197 ~~~~~~~~~~~~~~~~~y~aP 217 (326)
T 2w1i_A 197 QDKEYYKVKEPGESPIFWYAP 217 (326)
T ss_dssp SSCSEEECSSCCSCCGGGCCH
T ss_pred ccccccccccCCCCceeEECc
Confidence 432211 11223467789998
No 257
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.85 E-value=9.5e-22 Score=191.53 Aligned_cols=137 Identities=29% Similarity=0.428 Sum_probs=109.4
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec------------------------------cCccceeEEEEEe
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS------------------------------CSNEDFRALVLEY 433 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~------------------------------~~~~~~~~lv~ey 433 (527)
+.|.+.+.||+|+||.||+|+. .+++.||+|++... +...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4588999999999999999986 46899999997532 2234566899999
Q ss_pred ccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEeecccccccC
Q 035895 434 TTNGSLEKVLYSS---NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 434 ~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill---~~~~~~kl~Dfg~a~~~~ 507 (527)
+++|+|.+.+... +..+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988643 356889999999999999999999 9999999999999999 456889999999998764
Q ss_pred CCCCccceeccccccccccC
Q 035895 508 GEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~~~~~~~~t~~y~aP 527 (527)
... ......+|..|+||
T Consensus 179 ~~~---~~~~~~~t~~y~aP 195 (285)
T 3is5_A 179 SDE---HSTNAAGTALYMAP 195 (285)
T ss_dssp -----------CTTGGGCCH
T ss_pred Ccc---cCcCcccccCcCCh
Confidence 332 12335688999998
No 258
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.85 E-value=1.5e-21 Score=194.82 Aligned_cols=137 Identities=28% Similarity=0.400 Sum_probs=101.1
Q ss_pred cCCcccc-ceeccCCceEEEEEEcc-CCcEEEEEEEeec-------------------------c----CccceeEEEEE
Q 035895 384 TDGFSAN-NLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-------------------------C----SNEDFRALVLE 432 (527)
Q Consensus 384 ~~~~~~~-~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-------------------------~----~~~~~~~lv~e 432 (527)
.++|.+. ++||+|+||.||+|+.. +++.||||++... + ......++|||
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 106 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence 4678885 56999999999999875 6899999997431 0 11344789999
Q ss_pred eccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEeecccccccCC
Q 035895 433 YTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 433 y~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~---~~~~kl~Dfg~a~~~~~ 508 (527)
|+++|+|.+++...+ ..+++.++..++.|++.||+||| +++|+||||||+||+++. ++.+||+|||+++....
T Consensus 107 ~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp CCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 999999999998653 35889999999999999999999 899999999999999975 45699999999987643
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
.. .....+|++|+||
T Consensus 184 ~~----~~~~~~t~~y~aP 198 (336)
T 3fhr_A 184 NA----LQTPCYTPYYVAP 198 (336)
T ss_dssp -------------------
T ss_pred cc----cccCCCCcCccCh
Confidence 21 1234578899998
No 259
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.85 E-value=1.7e-21 Score=196.79 Aligned_cols=133 Identities=26% Similarity=0.356 Sum_probs=105.8
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCcc------c
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNE------D 425 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~------~ 425 (527)
.+.|+..+.||+|+||.||+|+. .+|+.||||++... +..+ .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46799999999999999999986 57899999997321 0111 2
Q ss_pred eeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 426 FRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 426 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
..++||||+ +++|.+++.. ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH--EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 348999999 8899999876 35788889999999999999999 99999999999999999999999999999987
Q ss_pred cCCCCCccceeccccccccccC
Q 035895 506 LTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 506 ~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.... .+..++|.+|+||
T Consensus 178 ~~~~-----~~~~~~t~~y~aP 194 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAP 194 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCT
T ss_pred cccc-----cCcCcCCCCcCCH
Confidence 6432 2345688999998
No 260
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.85 E-value=2e-21 Score=195.99 Aligned_cols=144 Identities=26% Similarity=0.344 Sum_probs=112.4
Q ss_pred HHHHhhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec------------------------------------
Q 035895 377 YQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS------------------------------------ 420 (527)
Q Consensus 377 ~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~------------------------------------ 420 (527)
.+++....++|++.+.||+|+||.||+|+..+|+.||||++...
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 44566778999999999999999999999888999999987321
Q ss_pred ----c-----CccceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC
Q 035895 421 ----C-----SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD 491 (527)
Q Consensus 421 ----~-----~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~ 491 (527)
+ ......++||||++ |+|.+.+......+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred eeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcC
Confidence 0 11124589999998 5898888776667899999999999999999999 899999999999999999
Q ss_pred CCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 492 NIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 492 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
++.+||+|||+++...... ......+|.+|+||
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aP 202 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADA---NKTHYVTHRWYRAP 202 (362)
T ss_dssp TCCEEECCTTC------------------CGGGCCH
T ss_pred CCCEEEEecCccccccccc---ccceecccceecCc
Confidence 9999999999998654322 22335678889998
No 261
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.85 E-value=1.5e-21 Score=190.37 Aligned_cols=141 Identities=26% Similarity=0.424 Sum_probs=114.1
Q ss_pred cCCccccc-eeccCCceEEEEEEcc---CCcEEEEEEEeecc-----------------------------CccceeEEE
Q 035895 384 TDGFSANN-LIGRGSFGSVYKARLQ---DGMEFAIKVFHFSC-----------------------------SNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~-~lg~G~~g~vy~~~~~---~~~~vavK~~~~~~-----------------------------~~~~~~~lv 430 (527)
.++|.+.+ .||+|+||.||+|... +++.||||+++... ...+..++|
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv 87 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV 87 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEE
Confidence 34566666 9999999999999853 67889999985311 123456899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999999766667899999999999999999999 9999999999999999999999999999998775332
Q ss_pred Ccc-ceeccccccccccC
Q 035895 511 QSM-TQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~-~~~~~~~t~~y~aP 527 (527)
... ......+|+.|+||
T Consensus 165 ~~~~~~~~~~~~~~y~aP 182 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAP 182 (287)
T ss_dssp CEECCCCSSCCCGGGCCH
T ss_pred ceeeccccccccccccCH
Confidence 211 12233467889998
No 262
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.85 E-value=1.4e-21 Score=189.16 Aligned_cols=136 Identities=26% Similarity=0.442 Sum_probs=96.6
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec--------------------------------cCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS--------------------------------CSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~--------------------------------~~~~~~~~lv 430 (527)
.++|++.+.||+|+||.||+|+. .+++.||+|++... +..++..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 46899999999999999999985 57899999987421 2234567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||+ +|++.+.+... ..+++.++..++.+++.|++||| +.+|+||||||+||++++++.+|++|||+++......
T Consensus 92 ~e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp EECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred ehhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 9999 67888887654 45789999999999999999999 9999999999999999999999999999998764332
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
. .....+|+.|+||
T Consensus 167 ~---~~~~~~t~~y~aP 180 (275)
T 2eue_A 167 F---LKTSCGSPNYAAP 180 (275)
T ss_dssp -----------CTTCCH
T ss_pred c---ccCCCCCcCcCCc
Confidence 1 1234578899998
No 263
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.85 E-value=1.7e-21 Score=193.20 Aligned_cols=136 Identities=28% Similarity=0.418 Sum_probs=113.8
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-----------------------------------cCccceeE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-----------------------------------CSNEDFRA 428 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-----------------------------------~~~~~~~~ 428 (527)
+.|++.+.||+|+||.||+|+.. +|+.||+|++... +...+..+
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVV 91 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 45899999999999999999864 6899999987531 12234568
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC----cEEEeeccccc
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI----VAHLSDFGIAK 504 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~----~~kl~Dfg~a~ 504 (527)
+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+|++|||+++
T Consensus 92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 92 LILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 999999999999999754 45788899999999999999999 89999999999999999887 79999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
....... .....||+.|+||
T Consensus 168 ~~~~~~~---~~~~~gt~~y~aP 187 (321)
T 2a2a_A 168 EIEDGVE---FKNIFGTPEFVAP 187 (321)
T ss_dssp ECCTTCC---CCCCCSCGGGCCH
T ss_pred ecCcccc---ccccCCCCCccCc
Confidence 7654321 2234688999998
No 264
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.85 E-value=1.1e-21 Score=190.66 Aligned_cols=141 Identities=25% Similarity=0.416 Sum_probs=112.2
Q ss_pred hcCCccccceeccCCceEEEEEEccC----CcEEEEEEEeec-----------------------------cCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQD----GMEFAIKVFHFS-----------------------------CSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~~----~~~vavK~~~~~-----------------------------~~~~~~~~l 429 (527)
..++|++.+.||+|+||.||+|+... +..||+|++... +..++..++
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWI 89 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEE
Confidence 35679999999999999999998542 346999987531 112344579
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++...+..+++.....++.+++.||+||| +++|+||||||+||+++.++.+|++|||+++.....
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999876667899999999999999999999 999999999999999999999999999999876543
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
.. .......+++.|+||
T Consensus 167 ~~-~~~~~~~~~~~y~aP 183 (281)
T 3cc6_A 167 DY-YKASVTRLPIKWMSP 183 (281)
T ss_dssp -------CCCCCGGGCCH
T ss_pred cc-cccccCCCCcceeCc
Confidence 21 122234467889998
No 265
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.85 E-value=2.1e-21 Score=191.76 Aligned_cols=139 Identities=32% Similarity=0.413 Sum_probs=111.9
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec---------------------------cCccceeEEEEEecc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS---------------------------CSNEDFRALVLEYTT 435 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~---------------------------~~~~~~~~lv~ey~~ 435 (527)
.+.|++.+.||+|+||.||+|+.. +|+.||||++... +...+..++||||++
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 107 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCG 107 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCC
Confidence 467999999999999999999865 5899999987531 223456689999999
Q ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccce
Q 035895 436 NGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQ 515 (527)
Q Consensus 436 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~ 515 (527)
+|+|.+++......+++.....++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 108 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~ 182 (314)
T 3com_A 108 AGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA--KR 182 (314)
T ss_dssp TEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS--CB
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc--cc
Confidence 99999999765667899999999999999999999 99999999999999999999999999999987653321 12
Q ss_pred eccccccccccC
Q 035895 516 TQTLAIIGYMAP 527 (527)
Q Consensus 516 ~~~~~t~~y~aP 527 (527)
....+|..|+||
T Consensus 183 ~~~~~~~~y~aP 194 (314)
T 3com_A 183 NTVIGTPFWMAP 194 (314)
T ss_dssp CCCCSCGGGCCH
T ss_pred CccCCCCCccCh
Confidence 234578899998
No 266
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.85 E-value=3e-22 Score=215.38 Aligned_cols=226 Identities=15% Similarity=0.052 Sum_probs=123.1
Q ss_pred cccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCc-ccccCCCCCCEEeccCcccccccChhhhcCcccCeeee
Q 035895 117 SLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSIS-ITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDL 195 (527)
Q Consensus 117 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 195 (527)
+|+.|+++++.. ..+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++++...+.++..+..+++|+.|++
T Consensus 271 ~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L 349 (592)
T 3ogk_B 271 KLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRI 349 (592)
T ss_dssp TCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEE
T ss_pred cccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEe
Confidence 566666666432 2455566666677777777766553322 23456667777777633222233444455666777777
Q ss_pred e-----------cccCCCCC-CccccCCccCceeeCCCCCCCC-CchhhhC-CCCccEEEcc----CCccccc-----CC
Q 035895 196 R-----------GNKLSGSI-PTCFGNLTALRNLHLDSNELTS-IPSILWN-LKDILYLDFW----SNLFVGP-----LP 252 (527)
Q Consensus 196 ~-----------~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~-lp~~~~~-l~~L~~l~l~----~n~~~~~-----~p 252 (527)
+ .|.++... +..+..+++|++|+++.|.++. .+..+.. +++|+.|+++ .|.+++. ++
T Consensus 350 ~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~ 429 (592)
T 3ogk_B 350 ERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVR 429 (592)
T ss_dssp ECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHH
T ss_pred ecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHH
Confidence 6 24444321 1123446667777776666654 2233332 5666666664 4444432 22
Q ss_pred ccccCCCCCCEEEccCCC--CCCCChhhhh-cCCCCCEEEccccccee-ecCCCCCCCCCCCEEeCCCCccccc-Cccch
Q 035895 253 SKIGNLKVLTRIDFSRNN--LLGDIPTTIQ-GLKSLQFLSLGHNRLQG-SIPNSFDDLVSLESLDLSNNNLSEI-IPLSL 327 (527)
Q Consensus 253 ~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~-~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~~~-~p~~~ 327 (527)
..+..+++|++|++++|. +++..+..+. .+++|++|++++|++++ .++..+..+++|+.|++++|.+++. ++...
T Consensus 430 ~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 509 (592)
T 3ogk_B 430 SLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAV 509 (592)
T ss_dssp HHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHH
T ss_pred HHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHH
Confidence 234556667777775433 4433333333 36667777777776654 2333445566677777777766543 23334
Q ss_pred hhhccCCeeEeeeeee
Q 035895 328 EKLLYLNILLIVVVIL 343 (527)
Q Consensus 328 ~~l~~L~~L~~~~~~~ 343 (527)
..++.|+.|+++.+.+
T Consensus 510 ~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 510 TKLPSLRYLWVQGYRA 525 (592)
T ss_dssp HHCSSCCEEEEESCBC
T ss_pred HhcCccCeeECcCCcC
Confidence 4566666666666554
No 267
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.85 E-value=2.3e-21 Score=187.85 Aligned_cols=136 Identities=29% Similarity=0.355 Sum_probs=113.6
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-----------------------------cCccceeEEEEEec
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-----------------------------~~~~~~~~lv~ey~ 434 (527)
+.|++.+.||+|+||.||+|+.. ++..||+|++... +...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 45899999999999999999864 5789999987531 22345678999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEeecccccccCCCCC
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill---~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
++|+|.+++... ..+++.....++.+++.|++||| +++|+||||||+||++ +.++.+|++|||+++.......
T Consensus 89 ~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 89 TGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp CSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred CCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 999999988754 35788899999999999999999 9999999999999999 7889999999999987653321
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
.....+|++|+||
T Consensus 165 ---~~~~~~t~~y~aP 177 (277)
T 3f3z_A 165 ---MRTKVGTPYYVSP 177 (277)
T ss_dssp ---BCCCCSCTTTCCH
T ss_pred ---hhccCCCCCccCh
Confidence 2234588899998
No 268
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.85 E-value=1.9e-21 Score=200.51 Aligned_cols=135 Identities=24% Similarity=0.317 Sum_probs=111.6
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec----------------------------------cCccceeE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS----------------------------------CSNEDFRA 428 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~----------------------------------~~~~~~~~ 428 (527)
...|++.+.||+|+||.||+|+. .+++.||||++... +...+..+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 35699999999999999999975 46899999998421 11235668
Q ss_pred EEEEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc--EEEeecccccc
Q 035895 429 LVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV--AHLSDFGIAKL 505 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~--~kl~Dfg~a~~ 505 (527)
+||||+. |+|.+++.... ..+++..+..++.||+.||+||| +++||||||||+|||++.++. +||+|||+|+.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999996 69999887654 34889999999999999999999 899999999999999998887 99999999986
Q ss_pred cCCCCCccceeccccccccccC
Q 035895 506 LTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 506 ~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.... .....+|++||||
T Consensus 252 ~~~~-----~~~~~gt~~y~aP 268 (429)
T 3kvw_A 252 EHQR-----VYTYIQSRFYRAP 268 (429)
T ss_dssp TTCC-----CCSSCSCGGGCCH
T ss_pred cCCc-----ccccCCCCCccCh
Confidence 5432 1234678999998
No 269
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.85 E-value=1.6e-21 Score=204.62 Aligned_cols=136 Identities=26% Similarity=0.429 Sum_probs=112.6
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEee-------------------------------ccCccceeEEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF-------------------------------SCSNEDFRALVLE 432 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~-------------------------------~~~~~~~~~lv~e 432 (527)
+.|++.+.||+|+||+||+|+.. +++.||||++.. .+...+..++|||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 101 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGE 101 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEE
Confidence 45899999999999999999864 789999999742 1223456789999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC---CCCcEEEeecccccccCCC
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD---DNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~---~~~~~kl~Dfg~a~~~~~~ 509 (527)
||++|+|.+.+... ..+++..+..++.|++.||+||| +++|+||||||+||+++ .++.+||+|||+|+.....
T Consensus 102 ~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 102 LYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred cCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 99999999988654 35788899999999999999999 99999999999999995 4578999999999876533
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
. ......||++|+||
T Consensus 178 ~---~~~~~~gt~~y~aP 192 (486)
T 3mwu_A 178 T---KMKDRIGTAYYIAP 192 (486)
T ss_dssp -------CCTTGGGGCCG
T ss_pred C---ccCCCcCCCCCCCH
Confidence 2 12345689999998
No 270
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.85 E-value=1.1e-21 Score=193.63 Aligned_cols=145 Identities=21% Similarity=0.391 Sum_probs=105.3
Q ss_pred HhhhcCCccccceeccCCceEEEEEEcc----CCcEEEEEEEeecc-------------------------------Ccc
Q 035895 380 LLRATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFSC-------------------------------SNE 424 (527)
Q Consensus 380 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~~-------------------------------~~~ 424 (527)
+....+.|++.+.||+|+||.||+|+.. +++.||+|++.... ...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3444567899999999999999999753 35689999975310 011
Q ss_pred -----ceeEEEEEeccCCcHHHHHHh-----cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc
Q 035895 425 -----DFRALVLEYTTNGSLEKVLYS-----SNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV 494 (527)
Q Consensus 425 -----~~~~lv~ey~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~ 494 (527)
...++||||+++|+|.+++.. ....+++.++..++.+++.||+||| +++|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCc
Confidence 134899999999999999853 2345889999999999999999999 999999999999999999999
Q ss_pred EEEeecccccccCCCCCccceeccccccccccC
Q 035895 495 AHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 495 ~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+||+|||+++...............+++.|+||
T Consensus 186 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 218 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218 (313)
T ss_dssp EEECSCSCC----------------CCGGGSCH
T ss_pred EEEeecCcceecccccccCcccccCCCccccCc
Confidence 999999999876543222222334467789997
No 271
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.85 E-value=2.5e-21 Score=187.40 Aligned_cols=138 Identities=25% Similarity=0.465 Sum_probs=109.0
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------cCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------CSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------~~~~~~~~l 429 (527)
..++|++.+.||+|+||.||+|+.. +++.||||++... +..++..++
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM 88 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence 3567999999999999999999975 7899999997421 223456789
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++++|.+++...+ .+++.+...++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+++.....
T Consensus 89 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 89 VMEYVSGGELFDYICKHG-RVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EEECCCSCBHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EEeccCCCcHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 999999999999997643 5788899999999999999999 899999999999999999999999999999876533
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
.. .....+++.|+||
T Consensus 165 ~~---~~~~~~~~~y~aP 179 (276)
T 2h6d_A 165 EF---LRTSCGSPNYAAP 179 (276)
T ss_dssp ---------------CCT
T ss_pred cc---eecccCCccccCH
Confidence 21 1234578889998
No 272
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.85 E-value=9.9e-22 Score=195.13 Aligned_cols=148 Identities=28% Similarity=0.416 Sum_probs=114.6
Q ss_pred ccHHHHhhhcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-----------------------------cCc-
Q 035895 375 FSYQELLRATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-----------------------------CSN- 423 (527)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-----------------------------~~~- 423 (527)
++..++....+.|++.+.||+|+||.||+|+. .+++.||||++... +..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 44445555678899999999999999999986 57899999997421 001
Q ss_pred -----cceeEEEEEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 035895 424 -----EDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHL 497 (527)
Q Consensus 424 -----~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl 497 (527)
.+..++||||+++|+|.+++.... ..++......++.|++.||+||| +.+|+||||||+||+++.++.+||
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEE
Confidence 346789999999999999997643 45788888999999999999999 899999999999999999999999
Q ss_pred eecccccccCCCCCccceeccccccccccC
Q 035895 498 SDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 498 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+|||+++....... ......+|..|+||
T Consensus 171 ~Dfg~~~~~~~~~~--~~~~~~~~~~y~aP 198 (326)
T 2x7f_A 171 VDFGVSAQLDRTVG--RRNTFIGTPYWMAP 198 (326)
T ss_dssp CCCTTTC---------------CCGGGCCH
T ss_pred eeCcCceecCcCcc--ccccccCCccccCh
Confidence 99999987643211 12234578899998
No 273
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.85 E-value=3.4e-21 Score=187.26 Aligned_cols=137 Identities=26% Similarity=0.474 Sum_probs=113.4
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccceeEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNEDFRALVL 431 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~~~~lv~ 431 (527)
.++|++.+.||+|+||.||+|.. .+++.||+|++... +..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 46799999999999999999986 46899999997531 22345668999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc---EEEeecccccccCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV---AHLSDFGIAKLLTG 508 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~---~kl~Dfg~a~~~~~ 508 (527)
||+++|+|.+.+... ..+++.....++.+++.|++||| +.+|+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999888754 35788899999999999999999 899999999999999976554 99999999987653
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... .....+|++|+||
T Consensus 161 ~~~---~~~~~~~~~y~aP 176 (284)
T 3kk8_A 161 SEA---WHGFAGTPGYLSP 176 (284)
T ss_dssp SCB---CCCSCSCGGGCCH
T ss_pred Ccc---ccCCCCCcCCcCc
Confidence 321 2235688999998
No 274
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.85 E-value=9.7e-22 Score=195.41 Aligned_cols=141 Identities=23% Similarity=0.390 Sum_probs=108.7
Q ss_pred cCCccccceeccCCceEEEEEEc------cCCcEEEEEEEeec------------------------------cCcccee
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL------QDGMEFAIKVFHFS------------------------------CSNEDFR 427 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~------~~~~~vavK~~~~~------------------------------~~~~~~~ 427 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++... +...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46799999999999999999984 35778999997421 2234566
Q ss_pred EEEEEeccCCcHHHHHHhcC------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEe
Q 035895 428 ALVLEYTTNGSLEKVLYSSN------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLS 498 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~---~~~~kl~ 498 (527)
++||||+++|+|.+++.... ..+++.++..++.+++.||+||| +.+|+||||||+||+++. +..+|++
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 89999999999999998653 34788899999999999999999 899999999999999984 4569999
Q ss_pred ecccccccCCCCCccceeccccccccccC
Q 035895 499 DFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 499 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|||+++...............+|+.|+||
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aP 214 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPP 214 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCH
T ss_pred ccccccccccccccccCCCcCCCcceeCH
Confidence 99999865433222222334578889998
No 275
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.85 E-value=2.7e-21 Score=203.26 Aligned_cols=136 Identities=26% Similarity=0.452 Sum_probs=110.0
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-------------------------------cCccceeEEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-------------------------------CSNEDFRALVLE 432 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-------------------------------~~~~~~~~lv~e 432 (527)
+.|++.+.||+|+||.||+|+.. ++..||||++... +...+..++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 35899999999999999999864 7899999997531 223456789999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEeecccccccCCC
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~---~~~~kl~Dfg~a~~~~~~ 509 (527)
||++|+|.+.+... ..+++..+..++.|++.||+||| +++|+||||||+||+++. ++.+||+|||+|+.....
T Consensus 117 ~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 117 CYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred cCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 99999999988654 35788889999999999999999 999999999999999975 456999999999877543
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
. ......||++|+||
T Consensus 193 ~---~~~~~~gt~~y~aP 207 (494)
T 3lij_A 193 K---KMKERLGTAYYIAP 207 (494)
T ss_dssp B---CBCCCCSCTTTCCH
T ss_pred c---cccccCCCcCeeCH
Confidence 2 12345689999998
No 276
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.85 E-value=3.2e-21 Score=185.85 Aligned_cols=133 Identities=20% Similarity=0.375 Sum_probs=111.8
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeec-------------------------------cCcc--ceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS-------------------------------CSNE--DFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~-------------------------------~~~~--~~~~lv 430 (527)
.++|++.+.||+|+||.||+|+.+ ++.||||++... +... +..++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 457899999999999999999985 889999997521 1122 566899
Q ss_pred EEeccCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 431 LEYTTNGSLEKVLYSSNY-ILDILQRLNIMIDVTSALEYLHFGYSTP--IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~ylH~~~~~~--iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
|||+++|+|.+++..... .+++.++..++.|++.||+||| +++ |+||||||+||+++.++.++++|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999986543 4899999999999999999999 878 9999999999999999999999999876532
Q ss_pred CCCCccceeccccccccccC
Q 035895 508 GEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~~~~~~~~t~~y~aP 527 (527)
. ....+|+.|+||
T Consensus 165 ~-------~~~~~t~~y~aP 177 (271)
T 3kmu_A 165 S-------PGRMYAPAWVAP 177 (271)
T ss_dssp C-------TTCBSCGGGSCH
T ss_pred c-------cCccCCccccCh
Confidence 2 124578889998
No 277
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.85 E-value=5e-22 Score=210.64 Aligned_cols=143 Identities=24% Similarity=0.424 Sum_probs=116.4
Q ss_pred hhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeecc---------------------------CccceeEEEEEe
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFSC---------------------------SNEDFRALVLEY 433 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~---------------------------~~~~~~~lv~ey 433 (527)
....+.|++.+.||+|+||.||+|++..+..||||+++... ..++..++||||
T Consensus 263 ~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~ 342 (535)
T 2h8h_A 263 EIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEY 342 (535)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECC
T ss_pred ecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeeh
Confidence 33456789999999999999999999888889999985311 122456899999
Q ss_pred ccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc
Q 035895 434 TTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 434 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~ 512 (527)
+++|+|.+++... +..+++.+...++.||+.||+||| +++||||||||+|||+++++.+||+|||+++...... .
T Consensus 343 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 418 (535)
T 2h8h_A 343 MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-Y 418 (535)
T ss_dssp CTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-H
T ss_pred hcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-e
Confidence 9999999999753 245788899999999999999999 9999999999999999999999999999998764321 1
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
.......++..||||
T Consensus 419 ~~~~~~~~~~~y~aP 433 (535)
T 2h8h_A 419 TARQGAKFPIKWTAP 433 (535)
T ss_dssp HTTCSTTSCGGGSCH
T ss_pred ecccCCcCcccccCH
Confidence 112234467889998
No 278
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.85 E-value=1.1e-21 Score=211.22 Aligned_cols=140 Identities=26% Similarity=0.421 Sum_probs=108.0
Q ss_pred CCccccc-eeccCCceEEEEEEcc---CCcEEEEEEEeecc-----------------------------CccceeEEEE
Q 035895 385 DGFSANN-LIGRGSFGSVYKARLQ---DGMEFAIKVFHFSC-----------------------------SNEDFRALVL 431 (527)
Q Consensus 385 ~~~~~~~-~lg~G~~g~vy~~~~~---~~~~vavK~~~~~~-----------------------------~~~~~~~lv~ 431 (527)
+.+.+.+ .||+|+||.||+|..+ ++..||||+++... ...+..++||
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~ 414 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM 414 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEE
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEE
Confidence 3444444 7999999999999764 56789999975311 0123467999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
|||++|+|.+++......+++.++..++.||+.||+||| +++||||||||+|||+++++.+||+|||+|+.+.....
T Consensus 415 E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~ 491 (613)
T 2ozo_A 415 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDS 491 (613)
T ss_dssp ECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC----
T ss_pred EeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCc
Confidence 999999999999776667899999999999999999999 89999999999999999999999999999997653322
Q ss_pred cc-ceeccccccccccC
Q 035895 512 SM-TQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~-~~~~~~~t~~y~aP 527 (527)
.. ......+++.||||
T Consensus 492 ~~~~~~~~~~~~~y~AP 508 (613)
T 2ozo_A 492 YYTARSAGKWPLKWYAP 508 (613)
T ss_dssp ----------CCTTSCH
T ss_pred eeeeccCCCCccceeCH
Confidence 11 11223356789998
No 279
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.85 E-value=1.3e-21 Score=191.88 Aligned_cols=143 Identities=27% Similarity=0.368 Sum_probs=107.1
Q ss_pred hhcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee------------------------------ccCccceeEEE
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF------------------------------SCSNEDFRALV 430 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~------------------------------~~~~~~~~~lv 430 (527)
...++|++.+.||+|+||.||+|+. .+++.||||++.. .+..++..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3457899999999999999999986 4688999997632 11234566899
Q ss_pred EEeccCCcHHHHHHh-------cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 035895 431 LEYTTNGSLEKVLYS-------SNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIA 503 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~-------~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a 503 (527)
|||+++|+|.+++.. ....+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 999999999999864 2345889999999999999999999 899999999999999999999999999999
Q ss_pred cccCCCCCc---cceeccccccccccC
Q 035895 504 KLLTGEDQS---MTQTQTLAIIGYMAP 527 (527)
Q Consensus 504 ~~~~~~~~~---~~~~~~~~t~~y~aP 527 (527)
+........ .......+|+.|+||
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aP 195 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAP 195 (303)
T ss_dssp HHCC---------------CCCTTCCH
T ss_pred heeccCCCccchhhhcccCCCccccCH
Confidence 876432111 111234578899998
No 280
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.85 E-value=2e-21 Score=190.24 Aligned_cols=138 Identities=23% Similarity=0.410 Sum_probs=110.1
Q ss_pred ccccceeccCCceEEEEEEccC----CcEEEEEEEeec------------------------------cC-ccceeEEEE
Q 035895 387 FSANNLIGRGSFGSVYKARLQD----GMEFAIKVFHFS------------------------------CS-NEDFRALVL 431 (527)
Q Consensus 387 ~~~~~~lg~G~~g~vy~~~~~~----~~~vavK~~~~~------------------------------~~-~~~~~~lv~ 431 (527)
|+..+.||+|+||.||+|+..+ +..||+|++... +. .+...++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 5667999999999999998532 337999987421 11 223348999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
||+.+|+|.+++......+++.++..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 103 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999999876667889999999999999999999 89999999999999999999999999999986643221
Q ss_pred c--cceeccccccccccC
Q 035895 512 S--MTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~--~~~~~~~~t~~y~aP 527 (527)
. .......+|..|+||
T Consensus 180 ~~~~~~~~~~~~~~y~aP 197 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTAL 197 (298)
T ss_dssp GCSCCSSCTTCGGGGSCH
T ss_pred cccccCcCCCCCccccCh
Confidence 1 112234567889987
No 281
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.85 E-value=4e-21 Score=191.49 Aligned_cols=135 Identities=21% Similarity=0.336 Sum_probs=111.9
Q ss_pred cCCccccceeccCCceEEEEEEc--cCCcEEEEEEEeec----------------------------------cCcccee
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL--QDGMEFAIKVFHFS----------------------------------CSNEDFR 427 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~--~~~~~vavK~~~~~----------------------------------~~~~~~~ 427 (527)
.+.|++.+.||+|+||.||+|.. .+++.||||++... +...+..
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 35799999999999999999985 46889999997421 1234567
Q ss_pred EEEEEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---------------
Q 035895 428 ALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD--------------- 491 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~--------------- 491 (527)
++||||+ +++|.+++...+ ..+++..+..++.|++.||+||| +++|+||||||+||+++.
T Consensus 93 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~ 168 (339)
T 1z57_A 93 CIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE 168 (339)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence 8999999 889999987654 35788899999999999999999 899999999999999987
Q ss_pred ----CCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 492 ----NIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 492 ----~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
++.+||+|||+++...... ....+|++|+||
T Consensus 169 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aP 203 (339)
T 1z57_A 169 RTLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAP 203 (339)
T ss_dssp EEESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCH
T ss_pred ccccCCCceEeeCcccccCcccc-----ccccCCccccCh
Confidence 6789999999998754321 234678999998
No 282
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.85 E-value=2e-21 Score=194.21 Aligned_cols=141 Identities=26% Similarity=0.425 Sum_probs=114.6
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeec----------------------------cCccc----eeEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS----------------------------CSNED----FRALVL 431 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~----------------------------~~~~~----~~~lv~ 431 (527)
.++|++.+.||+|+||.||+|+. +++.||||++... +..++ ..++||
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~ 119 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 119 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEE
T ss_pred cccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEE
Confidence 46799999999999999999987 4899999997421 11122 678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC-----CCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG-----YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~-----~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
||+++|+|.+++... .+++.++..++.+++.||+|||.. ++++|+||||||+||+++.++.+||+|||+++..
T Consensus 120 e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~ 197 (342)
T 1b6c_B 120 DYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 197 (342)
T ss_dssp CCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEE
T ss_pred eecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceec
Confidence 999999999999753 578899999999999999999932 2578999999999999999999999999999876
Q ss_pred CCCCCcc--ceeccccccccccC
Q 035895 507 TGEDQSM--TQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~--~~~~~~~t~~y~aP 527 (527)
....... ......+|+.|+||
T Consensus 198 ~~~~~~~~~~~~~~~gt~~y~aP 220 (342)
T 1b6c_B 198 DSATDTIDIAPNHRVGTKRYMAP 220 (342)
T ss_dssp ETTTTEEEECCCSCCCCGGGCCH
T ss_pred cccccccccccccCCcCcccCCH
Confidence 5432211 12334688999998
No 283
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.85 E-value=3.9e-21 Score=186.95 Aligned_cols=136 Identities=28% Similarity=0.453 Sum_probs=114.2
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEee--------------------------------ccCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHF--------------------------------SCSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~--------------------------------~~~~~~~~~lv 430 (527)
.++|++.+.||+|+||.||+|+.. +++.||+|++.. .+..++..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 467999999999999999999864 678999999742 12234567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||+++|+|.+++...+ .+++.....++.|++.|++||| +.+|+||||||+||+++.++.+|++|||++.......
T Consensus 93 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHG-RFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp ECCCTTEEHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred EEeCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 99999999999987643 5788899999999999999999 9999999999999999999999999999997654321
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
.....++..|+||
T Consensus 169 ----~~~~~~~~~y~aP 181 (284)
T 2vgo_A 169 ----RRTMCGTLDYLPP 181 (284)
T ss_dssp ----BCCCCSCGGGCCH
T ss_pred ----cccccCCCCcCCH
Confidence 1234578899998
No 284
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.85 E-value=3.8e-21 Score=188.02 Aligned_cols=138 Identities=23% Similarity=0.365 Sum_probs=114.7
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------cCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------CSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------~~~~~~~~lv 430 (527)
.+.|++.+.||+|+||.||+|+.. +++.||+|++... +..++..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 356899999999999999999875 5789999987421 2234567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||+++++|.+++... ..+++.++..++.|++.|++||| +.+|+||||||+||+++.++.+|++|||+++......
T Consensus 94 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 94 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999999988654 35788899999999999999999 8999999999999999999999999999998764322
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
. ......+|..|+||
T Consensus 170 ~--~~~~~~~~~~y~aP 184 (294)
T 2rku_A 170 E--RKKVLCGTPNYIAP 184 (294)
T ss_dssp C--CBCCCCSCCSSCCH
T ss_pred c--ccccccCCCCcCCc
Confidence 1 12234578899998
No 285
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.85 E-value=4e-21 Score=190.19 Aligned_cols=136 Identities=27% Similarity=0.412 Sum_probs=110.2
Q ss_pred ccccceeccCCceEEEEEEc-----cCCcEEEEEEEeec------------------------------cC--ccceeEE
Q 035895 387 FSANNLIGRGSFGSVYKARL-----QDGMEFAIKVFHFS------------------------------CS--NEDFRAL 429 (527)
Q Consensus 387 ~~~~~~lg~G~~g~vy~~~~-----~~~~~vavK~~~~~------------------------------~~--~~~~~~l 429 (527)
|++.+.||+|+||.||+|.+ .+++.||||++... +. .....++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48899999999999999864 36889999997531 11 1345689
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++|+|.+++... .+++.++..++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999999654 4788999999999999999999 999999999999999999999999999999987543
Q ss_pred CCc-cceeccccccccccC
Q 035895 510 DQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~-~~~~~~~~t~~y~aP 527 (527)
... .......+|..|+||
T Consensus 188 ~~~~~~~~~~~~~~~y~aP 206 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAP 206 (318)
T ss_dssp CSEEEC---CCCCGGGCCH
T ss_pred ccccccccCCCCCceeeCh
Confidence 221 112234577889998
No 286
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.85 E-value=4e-21 Score=188.70 Aligned_cols=136 Identities=32% Similarity=0.437 Sum_probs=114.0
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec------------------------------cCccceeEEEEEe
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS------------------------------CSNEDFRALVLEY 433 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~------------------------------~~~~~~~~lv~ey 433 (527)
+.|+..+.||+|+||.||+|+. .+++.||||++... +..++..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 5589999999999999999985 57899999997531 1234566899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~ 513 (527)
+++|+|.+++.. ..+++.....++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 102 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 174 (303)
T 3a7i_A 102 LGGGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-- 174 (303)
T ss_dssp CTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--
T ss_pred CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcccc--
Confidence 999999999854 45789999999999999999999 89999999999999999999999999999987653321
Q ss_pred ceeccccccccccC
Q 035895 514 TQTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~~~~~~~t~~y~aP 527 (527)
......+|..|+||
T Consensus 175 ~~~~~~~~~~y~aP 188 (303)
T 3a7i_A 175 KRNTFVGTPFWMAP 188 (303)
T ss_dssp CBCCCCSCGGGCCH
T ss_pred ccCccCCCcCccCH
Confidence 12234678899998
No 287
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.85 E-value=3.7e-21 Score=191.29 Aligned_cols=134 Identities=25% Similarity=0.412 Sum_probs=111.0
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec---------------------------cCc--cceeEEEEEe
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS---------------------------CSN--EDFRALVLEY 433 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~---------------------------~~~--~~~~~lv~ey 433 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++... +.. ....++||||
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~ 114 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEH 114 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEEC
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEec
Confidence 36799999999999999999985 67899999997521 111 3456899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC-cEEEeecccccccCCCCCc
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI-VAHLSDFGIAKLLTGEDQS 512 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~-~~kl~Dfg~a~~~~~~~~~ 512 (527)
+++++|.+++.. ++..++..++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+|+.......
T Consensus 115 ~~~~~l~~~~~~----~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~- 186 (330)
T 3nsz_A 115 VNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE- 186 (330)
T ss_dssp CCCCCHHHHGGG----CCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC-
T ss_pred cCchhHHHHHHh----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc-
Confidence 999999998743 678888999999999999999 99999999999999999766 899999999987654322
Q ss_pred cceeccccccccccC
Q 035895 513 MTQTQTLAIIGYMAP 527 (527)
Q Consensus 513 ~~~~~~~~t~~y~aP 527 (527)
.....+|..|+||
T Consensus 187 --~~~~~~~~~y~aP 199 (330)
T 3nsz_A 187 --YNVRVASRYFKGP 199 (330)
T ss_dssp --CCSCCSCGGGCCH
T ss_pred --cccccccccccCh
Confidence 2234578889998
No 288
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.85 E-value=2.7e-21 Score=190.50 Aligned_cols=138 Identities=29% Similarity=0.420 Sum_probs=105.1
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeecc-------------------------CccceeEEEEEeccCCc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFSC-------------------------SNEDFRALVLEYTTNGS 438 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~-------------------------~~~~~~~lv~ey~~~g~ 438 (527)
.++|++.+.||+|+||.||+|+.. ++.||||++.... ...+..++||||+++|+
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~~ 85 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGS 85 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTCB
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCCC
Confidence 356889999999999999999875 6889999974210 01234679999999999
Q ss_pred HHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc-EEEeecccccccCCCCCccce
Q 035895 439 LEKVLYSSNY--ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV-AHLSDFGIAKLLTGEDQSMTQ 515 (527)
Q Consensus 439 L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~-~kl~Dfg~a~~~~~~~~~~~~ 515 (527)
|.+++...+. .+++.....++.|+++||+|||..+.++|+||||||+||+++.++. +||+|||+++..... .
T Consensus 86 L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-----~ 160 (307)
T 2eva_A 86 LYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-----M 160 (307)
T ss_dssp HHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------
T ss_pred HHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc-----c
Confidence 9999976542 4678888999999999999999333389999999999999998876 799999999865422 1
Q ss_pred eccccccccccC
Q 035895 516 TQTLAIIGYMAP 527 (527)
Q Consensus 516 ~~~~~t~~y~aP 527 (527)
....||+.|+||
T Consensus 161 ~~~~gt~~y~aP 172 (307)
T 2eva_A 161 TNNKGSAAWMAP 172 (307)
T ss_dssp ----CCTTSSCH
T ss_pred ccCCCCCceECh
Confidence 234578899998
No 289
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.85 E-value=2.1e-21 Score=187.40 Aligned_cols=134 Identities=31% Similarity=0.505 Sum_probs=103.2
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEee---------------------------------ccCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHF---------------------------------SCSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~---------------------------------~~~~~~~~~lv 430 (527)
.++|++.+.||+|+||.||+|+.. ++.||||+++. .+..++..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467999999999999999999975 78999998642 12234566899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC---eEecCCCCCCeeeCC--------CCcEEEee
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP---IIHCDLKPHNKLLDD--------NIVAHLSD 499 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~---iiHrdlk~~nill~~--------~~~~kl~D 499 (527)
|||+++|+|.+++.. ..+++.....++.|++.|++||| +++ |+||||||+||+++. ++.+|++|
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG--KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp EECCTTEEHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred EEcCCCCCHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999999853 46788899999999999999999 777 999999999999986 77899999
Q ss_pred cccccccCCCCCccceeccccccccccC
Q 035895 500 FGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 500 fg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
||+++...... .....+|+.|+||
T Consensus 160 fg~~~~~~~~~----~~~~~~~~~y~aP 183 (271)
T 3dtc_A 160 FGLAREWHRTT----KMSAAGAYAWMAP 183 (271)
T ss_dssp CCC-----------------CCGGGSCH
T ss_pred CCccccccccc----ccCCCCccceeCH
Confidence 99998764322 1234578899998
No 290
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.84 E-value=3.7e-21 Score=191.92 Aligned_cols=138 Identities=23% Similarity=0.365 Sum_probs=115.1
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------cCccceeEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------CSNEDFRALV 430 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------~~~~~~~~lv 430 (527)
.+.|.+.+.||+|+||.||+|+.. +++.||+|++... +...+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 457999999999999999999864 5789999987421 2234567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||+++++|.+++... ..+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999988654 45788899999999999999999 8999999999999999999999999999998764322
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
. ......+|..|+||
T Consensus 196 ~--~~~~~~gt~~y~aP 210 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAP 210 (335)
T ss_dssp C--CBCCCCSCCSSCCH
T ss_pred c--cccccCCCccccCH
Confidence 1 12234578899998
No 291
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.84 E-value=1.3e-21 Score=193.09 Aligned_cols=147 Identities=25% Similarity=0.376 Sum_probs=111.5
Q ss_pred ccHHHHhhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec---------------------------------c
Q 035895 375 FSYQELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS---------------------------------C 421 (527)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~---------------------------------~ 421 (527)
+.++.+....+.|++.+.||+|+||.||+|+..+++.||||++... +
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 3444444455679999999999999999999988999999997421 1
Q ss_pred CccceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 035895 422 SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501 (527)
Q Consensus 422 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg 501 (527)
..++..++||| +.+|+|.+++... ..+++.++..++.++++||+||| +.+|+||||||+||++++ +.+||+|||
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeecc
Confidence 23345679999 5678999999764 35788889999999999999999 899999999999999964 899999999
Q ss_pred cccccCCCCCccceeccccccccccC
Q 035895 502 IAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 502 ~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+++...............||+.|+||
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aP 197 (313)
T 3cek_A 172 IANQMQPDTTSVVKDSQVGTVNYMPP 197 (313)
T ss_dssp SSCC--------------CCGGGCCH
T ss_pred ccccccCccccccccCCCCCCCcCCH
Confidence 99876543322222345688999998
No 292
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.84 E-value=2e-21 Score=193.22 Aligned_cols=137 Identities=24% Similarity=0.409 Sum_probs=109.3
Q ss_pred CCcccc-ceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------cCccceeEEE
Q 035895 385 DGFSAN-NLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------CSNEDFRALV 430 (527)
Q Consensus 385 ~~~~~~-~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------~~~~~~~~lv 430 (527)
+.|.+. +.||+|+||.||+|+.. +++.||+|++... +...+..++|
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv 107 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILI 107 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEE
Confidence 446666 89999999999999864 6899999987531 1234566899
Q ss_pred EEeccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEeeccccccc
Q 035895 431 LEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLL 506 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~---~~~~kl~Dfg~a~~~ 506 (527)
|||+++|+|.+++... ...+++.++..++.|++.||+||| +++|+||||||+||+++. ++.+||+|||+++..
T Consensus 108 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~ 184 (327)
T 3lm5_A 108 LEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184 (327)
T ss_dssp EECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC
T ss_pred EEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCcccccc
Confidence 9999999999988543 346889999999999999999999 999999999999999987 789999999999876
Q ss_pred CCCCCccceeccccccccccC
Q 035895 507 TGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~~~~~~~~t~~y~aP 527 (527)
..... .....+|++|+||
T Consensus 185 ~~~~~---~~~~~gt~~y~aP 202 (327)
T 3lm5_A 185 GHACE---LREIMGTPEYLAP 202 (327)
T ss_dssp ------------CCCGGGCCH
T ss_pred CCccc---cccccCCcCccCC
Confidence 53321 2235688999998
No 293
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.84 E-value=2.6e-21 Score=190.79 Aligned_cols=140 Identities=27% Similarity=0.339 Sum_probs=108.3
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------cCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------CSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------~~~~~~~~l 429 (527)
..++|++.+.||+|+||.||+|+.. +++.||+|++... +..++..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3578999999999999999999864 7899999997421 123456689
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGE 509 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~ 509 (527)
||||+++++|.+++... ..+++.++..++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EEECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 99999999999999754 35788899999999999999999 899999999999999999999999999999876533
Q ss_pred CCccceeccccccccccC
Q 035895 510 DQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 510 ~~~~~~~~~~~t~~y~aP 527 (527)
.. .......+++.|+||
T Consensus 188 ~~-~~~~~~~~~~~y~aP 204 (309)
T 2h34_A 188 KL-TQLGNTVGTLYYMAP 204 (309)
T ss_dssp ----------CCGGGCCG
T ss_pred cc-ccccccCCCcCccCH
Confidence 21 112234578899998
No 294
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.84 E-value=4.5e-21 Score=197.24 Aligned_cols=136 Identities=34% Similarity=0.499 Sum_probs=108.1
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-------------------------c------CccceeEEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-------------------------C------SNEDFRALVLE 432 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-------------------------~------~~~~~~~lv~e 432 (527)
..|+..+.||+|+||+||+|+.. +|+.||||++... + ..+...++|||
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e 133 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLD 133 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehh
Confidence 35889999999999999999974 6899999987421 0 11123568999
Q ss_pred eccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC-CcEEEeecccccccCC
Q 035895 433 YTTNGSLEKVLYS---SNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDN-IVAHLSDFGIAKLLTG 508 (527)
Q Consensus 433 y~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~-~~~kl~Dfg~a~~~~~ 508 (527)
|+++ ++.+.+.. .+..+++.....++.||++||+||| +++|+||||||+|||++.+ +.+||+|||+|+.+..
T Consensus 134 ~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 134 YVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp CCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred cccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 9986 66665542 3456889899999999999999999 9999999999999999954 6789999999997643
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... .....+|.+|+||
T Consensus 210 ~~~---~~~~~~t~~y~aP 225 (420)
T 1j1b_A 210 GEP---NVSYICSRYYRAP 225 (420)
T ss_dssp TCC---CCSCCSCTTSCCH
T ss_pred CCC---ceeeeeCCCcCCH
Confidence 322 2235678999998
No 295
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.84 E-value=2e-21 Score=193.52 Aligned_cols=139 Identities=30% Similarity=0.460 Sum_probs=110.0
Q ss_pred hcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-------------------------------cCccceeEEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-------------------------------CSNEDFRALV 430 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-------------------------------~~~~~~~~lv 430 (527)
..++|++.+.||+|+||.||+|+.. +++.||||++... +...+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 4567999999999999999999864 5899999987421 2234567899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||+++++|.++.... ..+++..+..++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 103 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 103 FEFVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp EECCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred EecCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 9999999998876543 45789999999999999999999 9999999999999999999999999999998764332
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
. ......+|.+|+||
T Consensus 179 ~--~~~~~~~t~~y~aP 193 (331)
T 4aaa_A 179 E--VYDDEVATRWYRAP 193 (331)
T ss_dssp -------CCCCCTTCCH
T ss_pred c--ccCCCcCCccccCc
Confidence 1 12234578899998
No 296
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.84 E-value=1.5e-21 Score=195.52 Aligned_cols=144 Identities=31% Similarity=0.391 Sum_probs=110.0
Q ss_pred hhhcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee----------------------------------ccCccc
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF----------------------------------SCSNED 425 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~----------------------------------~~~~~~ 425 (527)
....+.|++.+.||+|+||.||+|+. .+++.||+|++.. .+..++
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 34456799999999999999999986 5688999998742 122345
Q ss_pred eeEEEEEeccCCcHHHHHHhc---------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 035895 426 FRALVLEYTTNGSLEKVLYSS---------------------------------------NYILDILQRLNIMIDVTSAL 466 (527)
Q Consensus 426 ~~~lv~ey~~~g~L~~~l~~~---------------------------------------~~~~~~~~~~~i~~~i~~~l 466 (527)
..++|||||++|+|.+++... ...+++.....++.|++.||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 678999999999999988421 11124556678999999999
Q ss_pred HHHhcCCCCCeEecCCCCCCeeeCCCC--cEEEeecccccccCCCCC--ccceeccccccccccC
Q 035895 467 EYLHFGYSTPIIHCDLKPHNKLLDDNI--VAHLSDFGIAKLLTGEDQ--SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 467 ~ylH~~~~~~iiHrdlk~~nill~~~~--~~kl~Dfg~a~~~~~~~~--~~~~~~~~~t~~y~aP 527 (527)
+||| +.+|+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+||
T Consensus 182 ~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aP 243 (345)
T 3hko_A 182 HYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAP 243 (345)
T ss_dssp HHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCH
T ss_pred HHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCc
Confidence 9999 89999999999999998766 899999999987643211 1122345689999998
No 297
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.84 E-value=1.6e-21 Score=193.96 Aligned_cols=140 Identities=25% Similarity=0.404 Sum_probs=107.5
Q ss_pred hhhcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccceeE
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNEDFRA 428 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~~~~ 428 (527)
....+.|++.+.||+|+||+||+|+. .+++.||||++... +..++..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 34467899999999999999999985 57899999987421 12345668
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee-----CCCCcEEEeecccc
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL-----DDNIVAHLSDFGIA 503 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill-----~~~~~~kl~Dfg~a 503 (527)
+||||+++ +|.+++...+ .+++..+..++.|++.||+||| +++|+||||||+||++ ++++.+||+|||+|
T Consensus 110 lv~e~~~~-~L~~~~~~~~-~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a 184 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNP-DVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLA 184 (329)
T ss_dssp EEEECCSE-EHHHHHHHCT-TCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHH
T ss_pred EEEecCCC-CHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCc
Confidence 99999985 9999987653 5788899999999999999999 8999999999999999 45566999999999
Q ss_pred cccCCCCCccceeccccccccccC
Q 035895 504 KLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 504 ~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+....... ..+...+|.+|+||
T Consensus 185 ~~~~~~~~--~~~~~~~t~~y~aP 206 (329)
T 3gbz_A 185 RAFGIPIR--QFTHEIITLWYRPP 206 (329)
T ss_dssp HHHC-------------CCTTCCH
T ss_pred cccCCccc--ccCCCcCCccccCH
Confidence 87643221 12334578899998
No 298
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.84 E-value=5.5e-21 Score=201.42 Aligned_cols=137 Identities=28% Similarity=0.450 Sum_probs=112.0
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec------------------------------------------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS------------------------------------------ 420 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~------------------------------------------ 420 (527)
.+.|++.+.||+|+||+||+|+.. +++.||||++...
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467999999999999999999864 6889999997531
Q ss_pred cCccceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC---cEEE
Q 035895 421 CSNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI---VAHL 497 (527)
Q Consensus 421 ~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~---~~kl 497 (527)
+...+..++|||||++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||+++.++ .+||
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEE
Confidence 12234568999999999999988754 35789999999999999999999 99999999999999998765 6999
Q ss_pred eecccccccCCCCCccceeccccccccccC
Q 035895 498 SDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 498 ~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+|||+|+...... ......||++|+||
T Consensus 191 ~Dfg~a~~~~~~~---~~~~~~gt~~y~aP 217 (504)
T 3q5i_A 191 VDFGLSSFFSKDY---KLRDRLGTAYYIAP 217 (504)
T ss_dssp CCCTTCEECCTTS---CBCCCCSCTTTCCH
T ss_pred EECCCCEEcCCCC---ccccccCCcCCCCH
Confidence 9999998775432 12335689999998
No 299
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.84 E-value=4e-21 Score=196.01 Aligned_cols=137 Identities=34% Similarity=0.459 Sum_probs=108.4
Q ss_pred CCccccceeccCCceEEEEEEccCCcEEEEEEEeec-------------------------c------CccceeEEEEEe
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS-------------------------C------SNEDFRALVLEY 433 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~-------------------------~------~~~~~~~lv~ey 433 (527)
..|+..+.||+|+||+||+|+...+..||+|++... + ..+...++||||
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~ 119 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEY 119 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEEC
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcchHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeec
Confidence 458999999999999999999877777999986321 1 112236799999
Q ss_pred ccCCcHHHHHH--hcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC-CCCcEEEeecccccccCCCC
Q 035895 434 TTNGSLEKVLY--SSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 434 ~~~g~L~~~l~--~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~-~~~~~kl~Dfg~a~~~~~~~ 510 (527)
++++.+..... .....+++..+..++.|+++||+||| +++|+||||||+||+++ .++.+||+|||+|+......
T Consensus 120 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 120 VPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp CSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred cCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 99754443322 23456888889999999999999999 99999999999999999 79999999999998764332
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
. .....+|.+|+||
T Consensus 197 ~---~~~~~~t~~y~aP 210 (394)
T 4e7w_A 197 P---NVSYICSRYYRAP 210 (394)
T ss_dssp C---CCSSCSCGGGCCH
T ss_pred C---CcccccCcCccCH
Confidence 2 2235678999998
No 300
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.84 E-value=5.2e-21 Score=185.89 Aligned_cols=136 Identities=29% Similarity=0.435 Sum_probs=110.9
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-----------------------------------cCccceeE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-----------------------------------CSNEDFRA 428 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-----------------------------------~~~~~~~~ 428 (527)
++|++.+.||+|+||.||+|+.. +++.||+|++... +...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 45899999999999999999875 6899999987531 12234568
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC----cEEEeeccccc
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI----VAHLSDFGIAK 504 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~----~~kl~Dfg~a~ 504 (527)
+||||+++++|.+++... ..+++.++..++.+++.||+||| +++|+||||||+||+++.++ .+|++|||+++
T Consensus 85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999999999754 35789999999999999999999 99999999999999998776 89999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
....... .....+|+.|+||
T Consensus 161 ~~~~~~~---~~~~~~~~~y~aP 180 (283)
T 3bhy_A 161 KIEAGNE---FKNIFGTPEFVAP 180 (283)
T ss_dssp ECC-----------CCCGGGCCH
T ss_pred eccCCCc---ccccCCCcCccCc
Confidence 7643221 2234578899998
No 301
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.84 E-value=5.9e-22 Score=210.77 Aligned_cols=127 Identities=20% Similarity=0.179 Sum_probs=93.4
Q ss_pred eeccCCceEEEEEEc-cCCcEEEEEEEee----------------------------------------ccCccceeEEE
Q 035895 392 LIGRGSFGSVYKARL-QDGMEFAIKVFHF----------------------------------------SCSNEDFRALV 430 (527)
Q Consensus 392 ~lg~G~~g~vy~~~~-~~~~~vavK~~~~----------------------------------------~~~~~~~~~lv 430 (527)
..+.|++|.+..++. -.|+.||+|++.. +..+++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 456677776666553 3588999999742 12245678999
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
||||+||+|.++|...+ .++.. +|+.||+.||+|+| +++||||||||+|||++++|++||+|||+|+......
T Consensus 321 MEyv~G~~L~d~i~~~~-~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-EIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp EECCCSEEHHHHHHTTC-CCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred EecCCCCcHHHHHHhCC-CCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999997654 45543 48899999999999 9999999999999999999999999999999775432
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
. ..+..+||++||||
T Consensus 394 ~--~~~t~vGTp~YmAP 408 (569)
T 4azs_A 394 S--WPTNLVQSFFVFVN 408 (569)
T ss_dssp C--CSHHHHHHHHHHHH
T ss_pred c--cccCceechhhccH
Confidence 2 22346799999998
No 302
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.84 E-value=2.3e-21 Score=203.33 Aligned_cols=136 Identities=29% Similarity=0.479 Sum_probs=114.0
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------cCccceeEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------CSNEDFRALVL 431 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------~~~~~~~~lv~ 431 (527)
+.|++.+.||+|+||.||+|+.. +++.||||++... +...+..++||
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 105 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVG 105 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 45899999999999999999865 7899999997421 12345678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEeecccccccCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill---~~~~~~kl~Dfg~a~~~~~ 508 (527)
|||++|+|.+++... ..+++..+..++.|++.||+||| +++|+||||||+||++ +.++.+||+|||+|+.+..
T Consensus 106 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 106 EVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp CCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 999999999998754 45788899999999999999999 8999999999999999 4678999999999987754
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... .....||++|+||
T Consensus 182 ~~~---~~~~~gt~~y~aP 197 (484)
T 3nyv_A 182 SKK---MKDKIGTAYYIAP 197 (484)
T ss_dssp CCS---HHHHTTGGGTCCH
T ss_pred ccc---cccCCCCccccCc
Confidence 321 2235689999998
No 303
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.84 E-value=1.8e-21 Score=196.16 Aligned_cols=136 Identities=27% Similarity=0.429 Sum_probs=112.1
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec------------------------------cCccceeEEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS------------------------------CSNEDFRALVLE 432 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~------------------------------~~~~~~~~lv~e 432 (527)
.++|++.+.||+|+||.||+|+.. +++.||+|++... +..++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 356999999999999999999875 7899999997531 123456789999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCeeeCCCCcEEEeecccccccCCCCC
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYST-PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
|+++|+|.+++...+ .+++.....++.+++.|++||| +. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CCTTCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999997643 5788889999999999999999 74 8999999999999999999999999999765321
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
......||++|+||
T Consensus 186 --~~~~~~gt~~y~aP 199 (360)
T 3eqc_A 186 --MANSFVGTRSYMSP 199 (360)
T ss_dssp --C----CCCCTTCCH
T ss_pred --cccCCCCCCCeECH
Confidence 12234678899998
No 304
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.84 E-value=7.2e-23 Score=220.25 Aligned_cols=322 Identities=11% Similarity=0.067 Sum_probs=173.4
Q ss_pred hhcchhccc-CCCceeecCchhhhcC--CCCCEEEcccccc-cc-ccc------cccceEEcccccccCCCCCCcccccC
Q 035895 19 VCYRICTID-SQNKLVGIVSITIFNL--STLKVFDVDNNYV-LG-RLS------SIVDELSLSDNYLTSSTPELSFLSSM 87 (527)
Q Consensus 19 ~~~~~~~~~-s~N~l~~~~~~~~~~l--~~L~~L~Ls~N~~-~~-~~~------~~l~~L~Ls~N~l~~~~~~~~~~~~~ 87 (527)
.|..+..++ ++|.+++..+..+..+ .+|++|+|++|.- .. .++ +.+++|+|++|.++.....+ +...+
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~-l~~~~ 188 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKW-LHELA 188 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHH-HHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhH-HHHHH
Confidence 355566666 5566555555555443 3366666666541 10 010 24667777777665432110 00112
Q ss_pred CCCCCCCEEEcccCCCCc----ccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCccc----------
Q 035895 88 SNCKYLKKLDISRNPLDG----FLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLN---------- 153 (527)
Q Consensus 88 ~~l~~L~~L~Ls~N~l~~----~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~---------- 153 (527)
..+++|++|++++|.+++ .++..+..+ ++|+.|++++|.+.+ ++..+..+++|++|+++.....
T Consensus 189 ~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~-~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l 266 (592)
T 3ogk_B 189 QHNTSLEVLNFYMTEFAKISPKDLETIARNC-RSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNL 266 (592)
T ss_dssp HHCCCCCEEECTTCCCSSCCHHHHHHHHHHC-TTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCC
T ss_pred hcCCCccEEEeeccCCCccCHHHHHHHHhhC-CCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHh
Confidence 456677777777777752 223333343 367777777777664 4566666666776666542211
Q ss_pred ----------------ccCcccccCCCCCCEEeccCcccccccC-hhhhcCcccCeeeeecccCCCCCCccccCCccCce
Q 035895 154 ----------------GSISITLGKLQKLQFLSFRGNELEGSIP-NVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRN 216 (527)
Q Consensus 154 ----------------~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 216 (527)
+.++..+..+++|+.|++++|.+++... ..+..+++|+.|+++++-..+.++..+..+++|++
T Consensus 267 ~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~ 346 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKR 346 (592)
T ss_dssp CCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCE
T ss_pred hccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCE
Confidence 1123333444455555555555432221 22344555555555522111122222344566666
Q ss_pred eeCC-----------CCCCCC--CchhhhCCCCccEEEccCCcccccCCccccC-CCCCCEEEcc----CCCCCCC----
Q 035895 217 LHLD-----------SNELTS--IPSILWNLKDILYLDFWSNLFVGPLPSKIGN-LKVLTRIDFS----RNNLLGD---- 274 (527)
Q Consensus 217 L~L~-----------~N~l~~--lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~---- 274 (527)
|+++ .|.++. ++.....+++|++|+++.|.+++..+..+.. +++|++|+++ .|.+++.
T Consensus 347 L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~ 426 (592)
T 3ogk_B 347 LRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDN 426 (592)
T ss_dssp EEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHH
T ss_pred EEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHH
Confidence 6666 244443 2333344666777777666666554445544 6777777775 5566653
Q ss_pred -ChhhhhcCCCCCEEEcccc--cceeecCCCC-CCCCCCCEEeCCCCccccc-CccchhhhccCCeeEeeeeee
Q 035895 275 -IPTTIQGLKSLQFLSLGHN--RLQGSIPNSF-DDLVSLESLDLSNNNLSEI-IPLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 275 -~p~~~~~l~~L~~L~L~~N--~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~-~p~~~~~l~~L~~L~~~~~~~ 343 (527)
++..+.++++|++|++++| .+++..+..+ ..+++|+.|++++|.+++. ++..+..++.|+.|+++.+.+
T Consensus 427 ~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 427 GVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp HHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred HHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 3344666777777777643 2443333222 2367788888888887763 344556777888888887764
No 305
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.84 E-value=1.3e-21 Score=191.97 Aligned_cols=139 Identities=26% Similarity=0.350 Sum_probs=112.0
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-----------------------------cCccceeEEEEEe
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-----------------------------CSNEDFRALVLEY 433 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-----------------------------~~~~~~~~lv~ey 433 (527)
.+.|++.+.||+|+||.||+|+.. +++.||+|++... +..++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 456999999999999999999975 5899999987421 2234567899999
Q ss_pred ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 035895 434 TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513 (527)
Q Consensus 434 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~ 513 (527)
+++|+|.+++......+++.....++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 172 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--Q 172 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--H
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc--c
Confidence 9999999998776667899999999999999999999 8999999999999999999999999999986432111 1
Q ss_pred ceeccccccccccC
Q 035895 514 TQTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~~~~~~~t~~y~aP 527 (527)
......+|..|+||
T Consensus 173 ~~~~~~~~~~y~aP 186 (302)
T 2j7t_A 173 KRDSFIGTPYWMAP 186 (302)
T ss_dssp C-----CCGGGCCH
T ss_pred ccccccCChhhcCC
Confidence 11234578889998
No 306
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.84 E-value=3.7e-21 Score=190.20 Aligned_cols=141 Identities=25% Similarity=0.296 Sum_probs=111.5
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-----------------------------cC----ccceeEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-----------------------------CS----NEDFRAL 429 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-----------------------------~~----~~~~~~l 429 (527)
.+.|++.+.||+|+||.||+|+. .+++.||||++... +. .....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 45699999999999999999986 67899999987421 11 2235679
Q ss_pred EEEeccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 430 VLEYTTNGSLEKVLYS---SNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
||||+++|+|.+++.. .+..+++.++..++.|++.||+||| +.+|+||||||+||+++.++.+|++|||+++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999875 3456889999999999999999999 899999999999999999999999999998865
Q ss_pred CCCCCcc-------ceeccccccccccC
Q 035895 507 TGEDQSM-------TQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~-------~~~~~~~t~~y~aP 527 (527)
....... ......+|+.|+||
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aP 212 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAP 212 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCG
T ss_pred ccccccccccccccccccccCCcccCCH
Confidence 3211100 01123468889998
No 307
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.84 E-value=1.2e-20 Score=184.01 Aligned_cols=133 Identities=27% Similarity=0.357 Sum_probs=110.1
Q ss_pred ccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-----------------------------------cCccceeEEE
Q 035895 387 FSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-----------------------------------CSNEDFRALV 430 (527)
Q Consensus 387 ~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-----------------------------------~~~~~~~~lv 430 (527)
|++.+.||+|+||.||+|.. .++..||+|++... .......++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 78888999999999999986 56889999987421 0113456899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeeC-CCCcEEEeecccccccC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTP--IIHCDLKPHNKLLD-DNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~--iiHrdlk~~nill~-~~~~~kl~Dfg~a~~~~ 507 (527)
|||+++|+|.+++... ..+++.....++.+++.||+||| +.+ |+||||||+||+++ +++.+||+|||+++...
T Consensus 108 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 9999999999999764 35788889999999999999999 877 99999999999998 78999999999997654
Q ss_pred CCCCccceeccccccccccC
Q 035895 508 GEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~~~~~~~~t~~y~aP 527 (527)
... .....+|+.|+||
T Consensus 184 ~~~----~~~~~~t~~y~aP 199 (290)
T 1t4h_A 184 ASF----AKAVIGTPEFMAP 199 (290)
T ss_dssp TTS----BEESCSSCCCCCG
T ss_pred ccc----cccccCCcCcCCH
Confidence 321 2234688999998
No 308
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.84 E-value=9.4e-21 Score=185.49 Aligned_cols=137 Identities=27% Similarity=0.438 Sum_probs=115.2
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec---------------------------------------cCc
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS---------------------------------------CSN 423 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~---------------------------------------~~~ 423 (527)
.++|++.+.||+|+||.||+|+.. +++.||||++... +..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 577999999999999999999874 6899999997421 112
Q ss_pred cceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccc
Q 035895 424 EDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIA 503 (527)
Q Consensus 424 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a 503 (527)
++..++||||+++|+|.+++... ..+++.....++.+++.||+||| +++|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccch
Confidence 34568999999999999999754 45788899999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCCccceeccccccccccC
Q 035895 504 KLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 504 ~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+....... .....++..|+||
T Consensus 172 ~~~~~~~~---~~~~~~~~~y~aP 192 (298)
T 1phk_A 172 CQLDPGEK---LREVCGTPSYLAP 192 (298)
T ss_dssp EECCTTCC---BCCCCSCGGGCCH
T ss_pred hhcCCCcc---cccccCCccccCH
Confidence 87653321 2234578899998
No 309
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.84 E-value=2.4e-21 Score=209.77 Aligned_cols=142 Identities=25% Similarity=0.396 Sum_probs=113.0
Q ss_pred hhcCCccccceeccCCceEEEEEEcc----CCcEEEEEEEeec-----------------------------cCccceeE
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARLQ----DGMEFAIKVFHFS-----------------------------CSNEDFRA 428 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~~----~~~~vavK~~~~~-----------------------------~~~~~~~~ 428 (527)
...+.|++.+.||+|+||.||+|+.. .+..||||++... +..++..+
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 466 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVW 466 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceE
Confidence 34467899999999999999999863 3567999986421 11234568
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
+||||+++|+|.+++...+..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+....
T Consensus 467 lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 999999999999999876667899999999999999999999 89999999999999999999999999999987753
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... .......+|+.||||
T Consensus 544 ~~~-~~~~~~~~t~~y~aP 561 (656)
T 2j0j_A 544 STY-YKASKGKLPIKWMAP 561 (656)
T ss_dssp -----------CCGGGCCH
T ss_pred Ccc-eeccCCCCCcceeCH
Confidence 322 222334567889998
No 310
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.84 E-value=5.2e-21 Score=189.83 Aligned_cols=140 Identities=29% Similarity=0.443 Sum_probs=114.9
Q ss_pred hhhcCCccccceeccCCceEEEEEEc--cCCcEEEEEEEeec----------------------------------cC--
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARL--QDGMEFAIKVFHFS----------------------------------CS-- 422 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~--~~~~~vavK~~~~~----------------------------------~~-- 422 (527)
....++|++.+.||+|+||.||+|+. .+++.||+|++... +.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred cCchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 34567899999999999999999986 46889999987421 00
Q ss_pred ---ccceeEEEEEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEe
Q 035895 423 ---NEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLS 498 (527)
Q Consensus 423 ---~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~ 498 (527)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEEC
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEe
Confidence 2345679999998 69999987643 34789899999999999999999 8999999999999999999999999
Q ss_pred ecccccccCCCCCccceeccccccccccC
Q 035895 499 DFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 499 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|||+++...... ......+|..|+||
T Consensus 163 Dfg~~~~~~~~~---~~~~~~~~~~y~aP 188 (326)
T 1blx_A 163 DFGLARIYSFQM---ALTSVVVTLWYRAP 188 (326)
T ss_dssp SCCSCCCCCGGG---GGCCCCCCCTTCCH
T ss_pred cCcccccccCCC---CccccccccceeCH
Confidence 999998764321 22335678899998
No 311
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.84 E-value=9.9e-21 Score=185.99 Aligned_cols=140 Identities=25% Similarity=0.361 Sum_probs=112.2
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec---------------------------------c--Ccccee
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS---------------------------------C--SNEDFR 427 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~---------------------------------~--~~~~~~ 427 (527)
.++|++.+.||+|+||.||+|.. .+++.||+|++... + ...+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999996 46899999997421 1 223466
Q ss_pred EEEEEeccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 428 ALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
++||||+++| |.+++... +..+++.....++.|++.||+||| +++|+||||||+||+++.++.+|++|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 8999999987 76766543 356889899999999999999999 899999999999999999999999999999876
Q ss_pred CCCCCccceeccccccccccC
Q 035895 507 TGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~~~~~~~~t~~y~aP 527 (527)
.............+|..|+||
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aP 180 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPP 180 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCH
T ss_pred CccccccccccCCCCCCCcCh
Confidence 533222222344588899998
No 312
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.84 E-value=5.1e-21 Score=188.64 Aligned_cols=140 Identities=26% Similarity=0.479 Sum_probs=104.3
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEee--------------------------------ccCccceeEE
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHF--------------------------------SCSNEDFRAL 429 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~--------------------------------~~~~~~~~~l 429 (527)
..++|++.+.||+|+||.||+|.. .+|+.||||++.. .+..++..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 346799999999999999999985 5789999998752 1123456789
Q ss_pred EEEeccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 430 VLEYTTNGSLEKVLYS---SNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
||||+++|+|.+++.. .+..+++.....++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 9999999999999864 2455788899999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCccceeccccccccccC
Q 035895 507 TGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~~~~~~~~t~~y~aP 527 (527)
..... ......++..|+||
T Consensus 187 ~~~~~--~~~~~~~~~~y~aP 205 (310)
T 2wqm_A 187 SSKTT--AAHSLVGTPYYMSP 205 (310)
T ss_dssp --------------CCSSCCH
T ss_pred cCCCc--cccccCCCeeEeCh
Confidence 43221 12234578889998
No 313
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.84 E-value=1.5e-20 Score=189.56 Aligned_cols=133 Identities=24% Similarity=0.261 Sum_probs=82.5
Q ss_pred CEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhc-CCcCCcEEEeecCcccccCcccccCCCCCCEEecc
Q 035895 94 KKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIG-NLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFR 172 (527)
Q Consensus 94 ~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 172 (527)
+.+++++|.++. +|..+ ...++.|+|++|+|++..+..+. .+++|++|+|++|+|++..+..|..+++|+.|+|+
T Consensus 21 ~~l~c~~~~l~~-iP~~~---~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSL---PSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCSS-CCSSC---CTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcCc-cCccC---CCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 345555555554 23322 22455566666666555555555 66666666666666666666666666666666666
Q ss_pred CcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchh
Q 035895 173 GNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSI 230 (527)
Q Consensus 173 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~ 230 (527)
+|+|+...+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++|+|+.+|..
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 6666655555666666777777777777666666677777777777777777666653
No 314
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.84 E-value=4.7e-21 Score=190.44 Aligned_cols=137 Identities=32% Similarity=0.519 Sum_probs=109.3
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcE--EEEEEEeec-------------------------------cCccceeEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGME--FAIKVFHFS-------------------------------CSNEDFRALV 430 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~--vavK~~~~~-------------------------------~~~~~~~~lv 430 (527)
++|++.+.||+|+||.||+|+.. ++.. ||+|.+... +..++..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56899999999999999999864 5654 499987531 1223466899
Q ss_pred EEeccCCcHHHHHHhcC---------------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcE
Q 035895 431 LEYTTNGSLEKVLYSSN---------------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVA 495 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~ 495 (527)
|||+++|+|.+++...+ ..+++.++..++.|++.||+||| +++|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997543 35789999999999999999999 9999999999999999999999
Q ss_pred EEeecccccccCCCCCccceeccccccccccC
Q 035895 496 HLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 496 kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
||+|||+++..... .......+++.|+||
T Consensus 182 kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aP 210 (327)
T 1fvr_A 182 KIADFGLSRGQEVY---VKKTMGRLPVRWMAI 210 (327)
T ss_dssp EECCTTCEESSCEE---CCC----CCTTTCCH
T ss_pred EEcccCcCcccccc---ccccCCCCCccccCh
Confidence 99999999854321 112223457789988
No 315
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.84 E-value=9.6e-21 Score=184.93 Aligned_cols=189 Identities=24% Similarity=0.359 Sum_probs=108.8
Q ss_pred CEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccC
Q 035895 94 KKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRG 173 (527)
Q Consensus 94 ~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 173 (527)
..+.+..+.+++..+. ..+ ++|+.|++++|.++.. + .+..+++|++|++++|++++..+ +..+++|+.|++++
T Consensus 27 ~~~~l~~~~~~~~~~~--~~l-~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 27 IKDNLKKKSVTDAVTQ--NEL-NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHTTCSCTTSEECH--HHH-HTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHhcCCCcccccch--hhc-CcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 3344555555543222 222 2566666666666543 2 35556666666666666665433 55666666666666
Q ss_pred cccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCc
Q 035895 174 NELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPS 253 (527)
Q Consensus 174 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~ 253 (527)
|.+++ +| .+..+++|+.|++++|++++. ..+..+++|+.|++++|+++.+ .
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-------------------------~ 150 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-------------------------T 150 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-------------------------G
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-------------------------h
Confidence 66653 22 255555566666666655542 2355555555555555555544 3
Q ss_pred cccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCccccc
Q 035895 254 KIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEI 322 (527)
Q Consensus 254 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 322 (527)
.+..+++|++|++++|++.+..| +..+++|++|++++|++++. | .+..+++|+.|++++|+++..
T Consensus 151 ~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 151 VLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEECC
T ss_pred hhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccCC
Confidence 35556667777777777665433 66677777777777777643 3 366677777777777776653
No 316
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.84 E-value=5.4e-21 Score=194.99 Aligned_cols=134 Identities=27% Similarity=0.320 Sum_probs=108.6
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec------------------------------------cC----c
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS------------------------------------CS----N 423 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~------------------------------------~~----~ 423 (527)
+.|++.+.||+|+||+||+|+. .+++.||||++... +. .
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~ 116 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVN 116 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETT
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCC
Confidence 6799999999999999999985 56899999997421 00 2
Q ss_pred cceeEEEEEeccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCeeeCCCC--------
Q 035895 424 EDFRALVLEYTTNGSLEKVLYSS-NYILDILQRLNIMIDVTSALEYLHFGYST-PIIHCDLKPHNKLLDDNI-------- 493 (527)
Q Consensus 424 ~~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrdlk~~nill~~~~-------- 493 (527)
....++||||+ +|++.+.+... ...+++..+..++.|++.||+||| ++ +|+||||||+|||++.++
T Consensus 117 ~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 117 GTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp EEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhhh
Confidence 34568999999 55666655543 356889999999999999999999 87 999999999999999775
Q ss_pred -----------------------------------------cEEEeecccccccCCCCCccceeccccccccccC
Q 035895 494 -----------------------------------------VAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 494 -----------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.+||+|||+|+..... .+...||.+||||
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aP 262 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSL 262 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCH
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCC
Confidence 7999999999876432 2234688999998
No 317
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.84 E-value=4.9e-21 Score=187.64 Aligned_cols=138 Identities=29% Similarity=0.457 Sum_probs=112.7
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-------------------------------cCccceeEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-------------------------------CSNEDFRALVL 431 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-------------------------------~~~~~~~~lv~ 431 (527)
.++|++.+.||+|+||.||+|+.. +++.||||++... +..++..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 468999999999999999999865 7899999987421 12345678999
Q ss_pred EeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 432 EYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
||++ |+|.+++.... ..+++.....++.+++.||+||| +.+|+||||||+||+++.++.+|++|||+++......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9998 59999987643 45788889999999999999999 8999999999999999999999999999998764332
Q ss_pred CccceeccccccccccC
Q 035895 511 QSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~~~~~~~~t~~y~aP 527 (527)
. ......+|.+|+||
T Consensus 158 ~--~~~~~~~~~~y~aP 172 (299)
T 2r3i_A 158 R--TYTHEVVTLWYRAP 172 (299)
T ss_dssp B--CTTSCBCCCTTCCH
T ss_pred c--ccCcccccccccCc
Confidence 1 12234578889998
No 318
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.84 E-value=9.4e-21 Score=191.23 Aligned_cols=139 Identities=25% Similarity=0.330 Sum_probs=113.0
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec------------------------------cC-----ccce
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS------------------------------CS-----NEDF 426 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~------------------------------~~-----~~~~ 426 (527)
..+.|++.+.||+|+||.||+|+. .+++.||||++... +. ....
T Consensus 25 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 25 VGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred ccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 346799999999999999999985 46889999997421 00 1135
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
.++||||++ |+|.+++... .+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++..
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEcccC-cCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 689999998 4999998653 4788899999999999999999 999999999999999999999999999999876
Q ss_pred CCCCCc-cceeccccccccccC
Q 035895 507 TGEDQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~-~~~~~~~~t~~y~aP 527 (527)
...... ...+...||++|+||
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aP 200 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAP 200 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCH
T ss_pred CCCCCccccccccccccCCCCC
Confidence 532211 112345689999998
No 319
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.84 E-value=4e-21 Score=192.57 Aligned_cols=136 Identities=26% Similarity=0.403 Sum_probs=114.8
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeec-------------------------------------------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS------------------------------------------- 420 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~------------------------------------------- 420 (527)
.++|++.+.||+|+||.||+|+. +++.||||++...
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 56899999999999999999999 8999999987421
Q ss_pred ---cCccceeEEEEEeccCCcHHHH------HHhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCC-CCeEecCCCCCCeee
Q 035895 421 ---CSNEDFRALVLEYTTNGSLEKV------LYSS-NYILDILQRLNIMIDVTSALEYLHFGYS-TPIIHCDLKPHNKLL 489 (527)
Q Consensus 421 ---~~~~~~~~lv~ey~~~g~L~~~------l~~~-~~~~~~~~~~~i~~~i~~~l~ylH~~~~-~~iiHrdlk~~nill 489 (527)
+..++..++||||+++|+|.++ +... ...+++..+..++.|++.||+||| + ++|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 1123466899999999999988 5432 456889999999999999999999 7 999999999999999
Q ss_pred CCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 490 DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 490 ~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+.++.+||+|||.++..... ......+|..|+||
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aP 219 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPP 219 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCG
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCc
Confidence 99999999999999876432 22345678899998
No 320
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.84 E-value=1.7e-21 Score=188.84 Aligned_cols=136 Identities=29% Similarity=0.417 Sum_probs=106.0
Q ss_pred hcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec----------------------------cCccceeEEEEEec
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~----------------------------~~~~~~~~lv~ey~ 434 (527)
..++|++.+.||+|+||.||+|+.. |+.||||++... ....+..++||||+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred ChhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 3567999999999999999999875 789999987421 12234678999999
Q ss_pred cCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCcc
Q 035895 435 TNGSLEKVLYSSNY-ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSM 513 (527)
Q Consensus 435 ~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~ 513 (527)
++|+|.+++...+. .+++.....++.+++.|++||| +++|+||||||+||+++.++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--- 171 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 171 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc---
Confidence 99999999975432 3788889999999999999999 8999999999999999999999999999998654321
Q ss_pred ceeccccccccccC
Q 035895 514 TQTQTLAIIGYMAP 527 (527)
Q Consensus 514 ~~~~~~~t~~y~aP 527 (527)
....+++.|+||
T Consensus 172 --~~~~~~~~y~aP 183 (278)
T 1byg_A 172 --DTGKLPVKWTAP 183 (278)
T ss_dssp ------CCTTTSCH
T ss_pred --cCCCccccccCH
Confidence 123467789988
No 321
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.83 E-value=1.2e-20 Score=189.46 Aligned_cols=135 Identities=23% Similarity=0.356 Sum_probs=109.1
Q ss_pred cCCccccceeccCCceEEEEEEcc-CC-cEEEEEEEeec----------------------------------cCcccee
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DG-MEFAIKVFHFS----------------------------------CSNEDFR 427 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~-~~vavK~~~~~----------------------------------~~~~~~~ 427 (527)
.+.|++.+.||+|+||.||+|+.. ++ +.||+|+++.. +...+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 367999999999999999999864 44 78999997421 1123466
Q ss_pred EEEEEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee-----------------
Q 035895 428 ALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL----------------- 489 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill----------------- 489 (527)
++||||+ +|++.+.+.... ..+++.++..++.|++.||+||| +++|+||||||+||++
T Consensus 98 ~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 98 CIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccccccc
Confidence 8999999 567767665543 46889999999999999999999 9999999999999999
Q ss_pred --CCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 490 --DDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 490 --~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+.++.+||+|||+++...... ....||+.|+||
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aP 208 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPP 208 (355)
T ss_dssp EEESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCH
T ss_pred cccCCCcEEEeecCccccccccc-----cCCcCCCcccCC
Confidence 567899999999998754321 234688999998
No 322
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.83 E-value=1e-20 Score=187.40 Aligned_cols=137 Identities=26% Similarity=0.309 Sum_probs=113.7
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeecc-------------------------------------Ccc
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFSC-------------------------------------SNE 424 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~~-------------------------------------~~~ 424 (527)
..+.|++.+.||+|+||.||+|+. .+++.||||++.... ..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 356799999999999999999985 578999999975321 123
Q ss_pred ceeEEEEEeccC-CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC-CCCcEEEeeccc
Q 035895 425 DFRALVLEYTTN-GSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD-DNIVAHLSDFGI 502 (527)
Q Consensus 425 ~~~~lv~ey~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~-~~~~~kl~Dfg~ 502 (527)
+..++||||+.+ ++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ +++.+||+|||+
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred CcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 456799999986 8999998754 35788889999999999999999 99999999999999999 789999999999
Q ss_pred ccccCCCCCccceeccccccccccC
Q 035895 503 AKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 503 a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
++...... .....+|+.|+||
T Consensus 197 ~~~~~~~~----~~~~~gt~~y~aP 217 (320)
T 3a99_A 197 GALLKDTV----YTDFDGTRVYSPP 217 (320)
T ss_dssp CEECCSSC----BCCCCSCGGGSCH
T ss_pred cccccccc----ccCCCCCccCCCh
Confidence 98775322 2234588999998
No 323
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.83 E-value=2.2e-21 Score=188.09 Aligned_cols=139 Identities=29% Similarity=0.467 Sum_probs=112.2
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-------------------------------c--CccceeEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-------------------------------C--SNEDFRAL 429 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-------------------------------~--~~~~~~~l 429 (527)
.++|++.+.||+|+||.||+|+.. +++.||+|++... + ......++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 567999999999999999999864 7899999997521 1 12346789
Q ss_pred EEEeccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhcCCCCC-----eEecCCCCCCeeeCCCCcEEEeecc
Q 035895 430 VLEYTTNGSLEKVLYSS---NYILDILQRLNIMIDVTSALEYLHFGYSTP-----IIHCDLKPHNKLLDDNIVAHLSDFG 501 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~-----iiHrdlk~~nill~~~~~~kl~Dfg 501 (527)
||||+++|+|.+++... ...+++.....++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998753 234889999999999999999999 777 9999999999999999999999999
Q ss_pred cccccCCCCCccceeccccccccccC
Q 035895 502 IAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 502 ~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+++....... ......+|..|+||
T Consensus 162 ~~~~~~~~~~--~~~~~~~~~~y~aP 185 (279)
T 2w5a_A 162 LARILNHDTS--FAKTFVGTPYYMSP 185 (279)
T ss_dssp HHHHC---CH--HHHHHHSCCTTCCH
T ss_pred hheeeccccc--cccccCCCccccCh
Confidence 9987643221 11234578889998
No 324
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.83 E-value=4e-21 Score=190.07 Aligned_cols=144 Identities=26% Similarity=0.418 Sum_probs=111.2
Q ss_pred HHHhhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec-------------------------------cCccce
Q 035895 378 QELLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS-------------------------------CSNEDF 426 (527)
Q Consensus 378 ~~~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~-------------------------------~~~~~~ 426 (527)
++.....++|++.+.||+|+||.||+|+... .||+|++... +..++.
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 103 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPH 103 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSC
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCc
Confidence 3444556789999999999999999998754 5999987531 122345
Q ss_pred eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
.++||||+++|+|.+++...+..+++.++..++.+++.||+||| +++|+||||||+||+++ ++.+|++|||+++..
T Consensus 104 ~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 104 LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp EEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred eEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 68999999999999999776666888899999999999999999 89999999999999998 679999999998765
Q ss_pred CCCCC---ccceeccccccccccC
Q 035895 507 TGEDQ---SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~---~~~~~~~~~t~~y~aP 527 (527)
..... ........||+.|+||
T Consensus 180 ~~~~~~~~~~~~~~~~g~~~y~aP 203 (319)
T 2y4i_B 180 GVLQAGRREDKLRIQNGWLCHLAP 203 (319)
T ss_dssp --------CCSCBCCSGGGGTSCH
T ss_pred ccccccccccccccCCCcccccCh
Confidence 32111 1112234578899998
No 325
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.83 E-value=6.6e-21 Score=187.32 Aligned_cols=135 Identities=27% Similarity=0.470 Sum_probs=112.6
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-----------------------------cCccceeEEEEEec
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-----------------------------~~~~~~~~lv~ey~ 434 (527)
++|++.+.||+|+||.||+|+.. +|+.||+|++... +...+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLV 88 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcC
Confidence 46899999999999999999864 7899999997531 22345668999999
Q ss_pred cCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee---CCCCcEEEeecccccccCCCCC
Q 035895 435 TNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL---DDNIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 435 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill---~~~~~~kl~Dfg~a~~~~~~~~ 511 (527)
++|+|.+++...+ .+++.....++.|++.||+||| +.+|+||||||+||++ ++++.+|++|||+++.....
T Consensus 89 ~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-- 162 (304)
T 2jam_A 89 SGGELFDRILERG-VYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-- 162 (304)
T ss_dssp CSCBHHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB--
T ss_pred CCccHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC--
Confidence 9999999986543 5788889999999999999999 8999999999999999 78899999999999865322
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
......+|++|+||
T Consensus 163 --~~~~~~~~~~y~aP 176 (304)
T 2jam_A 163 --IMSTACGTPGYVAP 176 (304)
T ss_dssp --TTHHHHSCCCBCCT
T ss_pred --ccccccCCCCccCh
Confidence 11234578899998
No 326
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.83 E-value=1.4e-20 Score=183.93 Aligned_cols=138 Identities=29% Similarity=0.410 Sum_probs=110.1
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-----------------------------cCccceeEEEEEec
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-----------------------------CSNEDFRALVLEYT 434 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-----------------------------~~~~~~~~lv~ey~ 434 (527)
+.|....+||+|+||.||+|+. .+++.||||++... +...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 4455667999999999999985 56889999987531 22345668999999
Q ss_pred cCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-CCcEEEeecccccccCCCCC
Q 035895 435 TNGSLEKVLYSSNY--ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD-NIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 435 ~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~-~~~~kl~Dfg~a~~~~~~~~ 511 (527)
++|+|.+++..... ..++.....++.|++.||+||| +.+|+||||||+||+++. ++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 99999999976532 3567778889999999999999 899999999999999987 89999999999987643221
Q ss_pred ccceeccccccccccC
Q 035895 512 SMTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~~~~~~~~~t~~y~aP 527 (527)
......+|..|+||
T Consensus 179 --~~~~~~~~~~y~aP 192 (295)
T 2clq_A 179 --CTETFTGTLQYMAP 192 (295)
T ss_dssp ----CCCCCCGGGCCH
T ss_pred --cccccCCCccccCh
Confidence 12234578899998
No 327
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.83 E-value=5.8e-21 Score=186.50 Aligned_cols=141 Identities=25% Similarity=0.380 Sum_probs=111.1
Q ss_pred hcCCccccc-eeccCCceEEEEEEc---cCCcEEEEEEEeecc------------------------------CccceeE
Q 035895 383 ATDGFSANN-LIGRGSFGSVYKARL---QDGMEFAIKVFHFSC------------------------------SNEDFRA 428 (527)
Q Consensus 383 ~~~~~~~~~-~lg~G~~g~vy~~~~---~~~~~vavK~~~~~~------------------------------~~~~~~~ 428 (527)
..+.|++.+ .||+|+||.||+|.. .+++.||||++.... ...+..+
T Consensus 14 ~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 93 (291)
T 1xbb_A 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWM 93 (291)
T ss_dssp CGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEE
T ss_pred cchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcE
Confidence 345688877 999999999999954 346889999975311 1234567
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
+||||+++|+|.+++... ..+++.+...++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 94 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 999999999999999764 35788899999999999999999 89999999999999999999999999999987754
Q ss_pred CCCcc-ceeccccccccccC
Q 035895 509 EDQSM-TQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~-~~~~~~~t~~y~aP 527 (527)
..... ......+++.|+||
T Consensus 170 ~~~~~~~~~~~~~~~~y~aP 189 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAP 189 (291)
T ss_dssp TCSEEEC----CCCGGGCCH
T ss_pred CCCcccccccCCCCceeeCh
Confidence 32211 11223456889998
No 328
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.83 E-value=4.6e-21 Score=187.00 Aligned_cols=141 Identities=24% Similarity=0.331 Sum_probs=105.3
Q ss_pred cCCccccceeccCCceEEEEEEcc--CC--cEEEEEEEeecc-------------------------------CccceeE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ--DG--MEFAIKVFHFSC-------------------------------SNEDFRA 428 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~--~~--~~vavK~~~~~~-------------------------------~~~~~~~ 428 (527)
.++|++.+.||+|+||.||+|++. ++ ..||||+++... ...+..+
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK 96 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCce
Confidence 356999999999999999999853 33 368999874210 1122357
Q ss_pred EEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 429 LVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 429 lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
+||||+++|+|.+++......+++.....++.+++.||+||| +++|+||||||+||+++.++.+|++|||+++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999999876566889999999999999999999 89999999999999999999999999999987754
Q ss_pred CCCcc-ceeccccccccccC
Q 035895 509 EDQSM-TQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~-~~~~~~~t~~y~aP 527 (527)
..... ......+|..|+||
T Consensus 174 ~~~~~~~~~~~~~~~~y~aP 193 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAP 193 (291)
T ss_dssp -CCEEEC-----CCGGGCCH
T ss_pred cccchhhhccCCCCceeeCc
Confidence 32211 12234467789998
No 329
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.83 E-value=1.2e-20 Score=189.34 Aligned_cols=138 Identities=26% Similarity=0.377 Sum_probs=111.1
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec------------------------------cC-----cccee
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS------------------------------CS-----NEDFR 427 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~------------------------------~~-----~~~~~ 427 (527)
.++|++.+.||+|+||.||+|+.. +|+.||||++... +. .....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467999999999999999999864 6899999997421 01 12457
Q ss_pred EEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
++||||+. |+|.+++.. ..+++..+..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST--QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 89999998 599998875 35788899999999999999999 8999999999999999999999999999998765
Q ss_pred CCCCcc--------ceeccccccccccC
Q 035895 508 GEDQSM--------TQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~--------~~~~~~~t~~y~aP 527 (527)
...... ......||.+|+||
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aP 191 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAP 191 (353)
T ss_dssp ----------------CCCCCCGGGCCH
T ss_pred cccccccCccccccchhhccccccccCC
Confidence 321110 11234678999998
No 330
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.83 E-value=1.3e-20 Score=201.48 Aligned_cols=191 Identities=24% Similarity=0.326 Sum_probs=111.8
Q ss_pred CCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEe
Q 035895 91 KYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLS 170 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 170 (527)
..+..++++.+.+....+. ..+ .+|+.|++++|.+... + .+..+++|+.|+|++|++++..+ +..+++|+.|+
T Consensus 21 ~~l~~l~l~~~~i~~~~~~--~~L-~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 93 (605)
T 1m9s_A 21 AETIKDNLKKKSVTDAVTQ--NEL-NSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLF 93 (605)
T ss_dssp HHHHHHHTTCSCTTSEECH--HHH-TTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEE
T ss_pred HHHHHHhccCCCcccccch--hcC-CCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEE
Confidence 3455556666666655432 233 3577777777776643 2 46667777777777777765444 66677777777
Q ss_pred ccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCccccc
Q 035895 171 FRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGP 250 (527)
Q Consensus 171 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~ 250 (527)
|++|.+.+ +| .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.++.+ ..+..+++|+.|++++|.+.+.
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCc
Confidence 77777663 22 566666677777777766642 3466666666677666666665 3445555555555555555544
Q ss_pred CCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEccccccee
Q 035895 251 LPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQG 297 (527)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 297 (527)
.| +..+++|+.|+|++|++++. | .+..+++|+.|+|++|++.+
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEEC
T ss_pred hh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcC
Confidence 33 55555555555555555432 2 35555555555555555543
No 331
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.83 E-value=1.4e-20 Score=189.39 Aligned_cols=144 Identities=25% Similarity=0.388 Sum_probs=102.8
Q ss_pred HHhhhcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec----------------------------cC-------
Q 035895 379 ELLRATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS----------------------------CS------- 422 (527)
Q Consensus 379 ~~~~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~----------------------------~~------- 422 (527)
......++|++.+.||+|+||.||+|+. .+++.||||++... +.
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~ 96 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR 96 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence 3456678999999999999999999986 46899999987421 00
Q ss_pred ccceeEEEEEeccCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-CCcEEEe
Q 035895 423 NEDFRALVLEYTTNGSLEKVLYS---SNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD-NIVAHLS 498 (527)
Q Consensus 423 ~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~-~~~~kl~ 498 (527)
.....++||||+++ +|...+.. ....+++.....++.+++.|++|+| .++++|+||||||+||+++. ++.+||+
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 97 RDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp TCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEEEC
T ss_pred cceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEEEe
Confidence 01126799999987 55444332 3456788888999999999999999 45889999999999999996 8999999
Q ss_pred ecccccccCCCCCccceeccccccccccC
Q 035895 499 DFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 499 Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|||+++....... .....+|++|+||
T Consensus 175 Dfg~a~~~~~~~~---~~~~~gt~~y~aP 200 (360)
T 3e3p_A 175 DFGSAKKLSPSEP---NVAYICSRYYRAP 200 (360)
T ss_dssp CCTTCBCCCTTSC---CCSTTSCGGGCCH
T ss_pred eCCCceecCCCCC---cccccCCcceeCH
Confidence 9999987754322 2234678999998
No 332
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.83 E-value=1.7e-20 Score=189.13 Aligned_cols=156 Identities=25% Similarity=0.226 Sum_probs=94.7
Q ss_pred CCCEEEcccCCCCcccChhHh-hccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEe
Q 035895 92 YLKKLDISRNPLDGFLPRVVG-NFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLS 170 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~-~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 170 (527)
.++.|+|++|+|++..+..+. .+ .+|+.|+|++|.|+++.+..|..+++|++|+|++|+|++..+..|..+++|+.|+
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l-~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 118 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRL-TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLL 118 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCC-TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCCCCccChhhhhhcc-cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEE
Confidence 355666666666655444443 33 3566666666666665556666666666666666666665555666666666666
Q ss_pred ccCcccccccChhhhcCcccCeeeeecccCCCCCCccc---cCCccCceeeCCCCCCCCCch-hhhCCCC--ccEEEccC
Q 035895 171 FRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCF---GNLTALRNLHLDSNELTSIPS-ILWNLKD--ILYLDFWS 244 (527)
Q Consensus 171 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~L~~N~l~~lp~-~~~~l~~--L~~l~l~~ 244 (527)
|++|++++..|..|..+++|+.|+|++|+|++..+..| ..+++|+.|+|++|+|+.+|. .+..++. ++.|++.+
T Consensus 119 L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~ 198 (361)
T 2xot_A 119 LYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHN 198 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCS
T ss_pred CCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecC
Confidence 66666665556666666666666666666665544444 456667777777777766653 3444444 35666666
Q ss_pred Cccc
Q 035895 245 NLFV 248 (527)
Q Consensus 245 n~~~ 248 (527)
|.+.
T Consensus 199 N~~~ 202 (361)
T 2xot_A 199 NPLE 202 (361)
T ss_dssp SCEE
T ss_pred CCcc
Confidence 6554
No 333
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.83 E-value=1.2e-20 Score=191.04 Aligned_cols=134 Identities=25% Similarity=0.280 Sum_probs=102.0
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCcc------c
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNE------D 425 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~------~ 425 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++... +... .
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 47899999999999999999985 46899999997531 1111 2
Q ss_pred eeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 426 FRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 426 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
..++||||+++ +|.+.+.. .+++.+...++.|++.||+||| +++|+||||||+||+++.++.+||+|||+|+.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 56899999985 78888753 4788888999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCccceeccccccccccC
Q 035895 506 LTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 506 ~~~~~~~~~~~~~~~t~~y~aP 527 (527)
..... ..+...+|+.|+||
T Consensus 177 ~~~~~---~~~~~~gt~~y~aP 195 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAP 195 (371)
T ss_dssp ----------------CTTCCH
T ss_pred ccccc---ccCCceecCCccCH
Confidence 64321 12335688999998
No 334
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.83 E-value=1.9e-20 Score=186.39 Aligned_cols=141 Identities=26% Similarity=0.311 Sum_probs=103.3
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec------------------------------c--------Cc
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS------------------------------C--------SN 423 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~------------------------------~--------~~ 423 (527)
....|++.+.||+|+||.||+|+. .+++.||||++... + ..
T Consensus 26 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 26 GELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred cCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 345689999999999999999996 57899999987321 0 12
Q ss_pred cceeEEEEEeccCCcHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC--eEecCCCCCCeeeCCCCcEEEee
Q 035895 424 EDFRALVLEYTTNGSLEKVLYS--SNYILDILQRLNIMIDVTSALEYLHFGYSTP--IIHCDLKPHNKLLDDNIVAHLSD 499 (527)
Q Consensus 424 ~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~--iiHrdlk~~nill~~~~~~kl~D 499 (527)
....++||||+. |+|.+++.. ....+++.++..++.|++.||+||| +.+ |+||||||+||+++.++.+||+|
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~D 181 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCD 181 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEec
Confidence 234689999996 699998865 3446899999999999999999999 888 99999999999999999999999
Q ss_pred cccccccCCCCCcc----------ceeccccccccccC
Q 035895 500 FGIAKLLTGEDQSM----------TQTQTLAIIGYMAP 527 (527)
Q Consensus 500 fg~a~~~~~~~~~~----------~~~~~~~t~~y~aP 527 (527)
||+++......... ......+|+.|+||
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aP 219 (337)
T 3ll6_A 182 FGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTP 219 (337)
T ss_dssp CTTCBCCSSCC---------------------------
T ss_pred CccceeccccCcccccccccccchhhccccCCCCcCCh
Confidence 99998765322110 11134578899998
No 335
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.83 E-value=4.9e-21 Score=206.59 Aligned_cols=133 Identities=26% Similarity=0.400 Sum_probs=103.9
Q ss_pred ceeccCCceEEEEEEc---cCCcEEEEEEEeecc------------------------------CccceeEEEEEeccCC
Q 035895 391 NLIGRGSFGSVYKARL---QDGMEFAIKVFHFSC------------------------------SNEDFRALVLEYTTNG 437 (527)
Q Consensus 391 ~~lg~G~~g~vy~~~~---~~~~~vavK~~~~~~------------------------------~~~~~~~lv~ey~~~g 437 (527)
+.||+|+||.||+|.+ ..++.||||+++... ...+..++|||||++|
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 454 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence 5799999999999965 346789999985321 1123457999999999
Q ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCCCc-ccee
Q 035895 438 SLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQS-MTQT 516 (527)
Q Consensus 438 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~ 516 (527)
+|.+++... ..+++.++..|+.||+.||+||| +++||||||||+|||++.++.+||+|||+|+.+...... ...+
T Consensus 455 ~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 530 (635)
T 4fl3_A 455 PLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530 (635)
T ss_dssp EHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccccc
Confidence 999999754 45789999999999999999999 899999999999999999999999999999977543221 2223
Q ss_pred ccccccccccC
Q 035895 517 QTLAIIGYMAP 527 (527)
Q Consensus 517 ~~~~t~~y~aP 527 (527)
...+|+.|+||
T Consensus 531 ~~~~t~~y~AP 541 (635)
T 4fl3_A 531 HGKWPVKWYAP 541 (635)
T ss_dssp ----CGGGSCH
T ss_pred CCCCceeeeCh
Confidence 34467889998
No 336
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.83 E-value=6.3e-21 Score=189.11 Aligned_cols=136 Identities=27% Similarity=0.353 Sum_probs=110.3
Q ss_pred CCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec------------------------------------cCcccee
Q 035895 385 DGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS------------------------------------CSNEDFR 427 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~------------------------------------~~~~~~~ 427 (527)
++|++.+.||+|+||.||+|+. .+++.||||++... +...+..
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 89 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDY 89 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSSE
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCce
Confidence 5699999999999999999986 46899999987421 0012336
Q ss_pred EEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC---cEEEeeccccc
Q 035895 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI---VAHLSDFGIAK 504 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~---~~kl~Dfg~a~ 504 (527)
++||||+++|+|.+++... ..+++.....++.|++.||+||| +++|+||||||+||+++.++ .+||+|||+++
T Consensus 90 ~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 90 YIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp EEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred EEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 8999999999999988643 46788889999999999999999 99999999999999998655 49999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
...... ......||+.|+||
T Consensus 166 ~~~~~~---~~~~~~gt~~y~aP 185 (322)
T 2ycf_A 166 ILGETS---LMRTLCGTPTYLAP 185 (322)
T ss_dssp ECCCCH---HHHHHHSCCTTCCH
T ss_pred eccccc---ccccccCCcCccCc
Confidence 764321 11234578899998
No 337
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.83 E-value=4.1e-21 Score=193.93 Aligned_cols=134 Identities=26% Similarity=0.377 Sum_probs=94.9
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cC------cc
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CS------NE 424 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~------~~ 424 (527)
..+.|++.+.||+|+||.||+|.. .+|+.||||++... +. ..
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 347899999999999999999985 57899999997421 00 11
Q ss_pred ceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccc
Q 035895 425 DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504 (527)
Q Consensus 425 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~ 504 (527)
...++||||+ +++|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC-----
T ss_pred CeEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 3468999999 6899998864 45788899999999999999999 9999999999999999999999999999998
Q ss_pred ccCCCCCccceeccccccccccC
Q 035895 505 LLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 505 ~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
..... .+...+|.+|+||
T Consensus 181 ~~~~~-----~~~~~~t~~y~aP 198 (367)
T 2fst_X 181 HTADE-----MTGYVATRWYRAP 198 (367)
T ss_dssp ---------------CCCTTCCH
T ss_pred ccccc-----CCCcCcCcCccCh
Confidence 75432 2335688999998
No 338
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.83 E-value=4.4e-20 Score=172.58 Aligned_cols=152 Identities=19% Similarity=0.246 Sum_probs=99.0
Q ss_pred eEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccCh-hHhhccccccEEEcccCccccccchhhcCCcCCcE
Q 035895 66 ELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPR-VVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLIS 144 (527)
Q Consensus 66 ~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~-~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 144 (527)
.+++++|.++.++..+ .+.+++|+|++|++++..|. .|..+. +|+.|+|++|.|++..+..|..+++|++
T Consensus 15 ~l~~s~n~l~~iP~~~--------~~~~~~L~L~~N~l~~~~~~~~~~~l~-~L~~L~L~~N~i~~i~~~~~~~l~~L~~ 85 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHI--------PQYTAELRLNNNEFTVLEATGIFKKLP-QLRKINFSNNKITDIEEGAFEGASGVNE 85 (220)
T ss_dssp EEECCSSCCSSCCSCC--------CTTCSEEECCSSCCCEECCCCCGGGCT-TCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred EeEeCCCCcccCccCC--------CCCCCEEEcCCCcCCccCchhhhccCC-CCCEEECCCCcCCEECHHHhCCCCCCCE
Confidence 4555555555544332 13356777777777765442 344443 5777777777776666666777777777
Q ss_pred EEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCC
Q 035895 145 IDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNEL 224 (527)
Q Consensus 145 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 224 (527)
|+|++|++++..+..|..+++|+.|++++|++++..|..|..+++|+.|+|++|+|++..|..|..+++|+.|++++|.+
T Consensus 86 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 86 ILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp EECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred EECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 77777777766666667777777777777777766666677777777777777777766666777777777777777766
Q ss_pred CC
Q 035895 225 TS 226 (527)
Q Consensus 225 ~~ 226 (527)
..
T Consensus 166 ~c 167 (220)
T 2v70_A 166 NC 167 (220)
T ss_dssp EC
T ss_pred cC
Confidence 53
No 339
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.83 E-value=5.5e-21 Score=197.11 Aligned_cols=140 Identities=27% Similarity=0.438 Sum_probs=105.4
Q ss_pred cCCccccceeccCCceEEEEEEccCCcEEEEEEEeec---------------------------cCccceeEEEEEeccC
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS---------------------------CSNEDFRALVLEYTTN 436 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~---------------------------~~~~~~~~lv~ey~~~ 436 (527)
..+|+..++||+|+||+||.....+++.||||++... +...+..++|||||+
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~- 101 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA- 101 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence 3458889999999999977666678899999987421 123456789999997
Q ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC-----CCcEEEeecccccccCCCCC
Q 035895 437 GSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD-----NIVAHLSDFGIAKLLTGEDQ 511 (527)
Q Consensus 437 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~-----~~~~kl~Dfg~a~~~~~~~~ 511 (527)
|+|.+++..........++..++.||+.||+||| +++|+||||||+||+++. ...+||+|||+|+.......
T Consensus 102 g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 102 ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 5999999866544444456789999999999999 899999999999999942 34688999999987753322
Q ss_pred c-cceeccccccccccC
Q 035895 512 S-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 512 ~-~~~~~~~~t~~y~aP 527 (527)
. ...+...||++||||
T Consensus 179 ~~~~~~~~~gt~~y~AP 195 (432)
T 3p23_A 179 SFSRRSGVPGTEGWIAP 195 (432)
T ss_dssp -------CCSCTTSCCG
T ss_pred ceeeccccCCCcCccCh
Confidence 1 222345689999998
No 340
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.83 E-value=5.4e-21 Score=196.26 Aligned_cols=135 Identities=18% Similarity=0.214 Sum_probs=104.8
Q ss_pred hcCCccccceeccCCceEEEEEE-ccCCcEEEEEEEeeccC--------------------c------------------
Q 035895 383 ATDGFSANNLIGRGSFGSVYKAR-LQDGMEFAIKVFHFSCS--------------------N------------------ 423 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~-~~~~~~vavK~~~~~~~--------------------~------------------ 423 (527)
....|...++||+|+||+||+|+ ..+|+.||||++..... +
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 34457888999999999999999 46799999999862100 0
Q ss_pred ---------------------cceeEEEEEeccCCcHHHHHHh------cCCCCCHHHHHHHHHHHHHHHHHHhcCCCCC
Q 035895 424 ---------------------EDFRALVLEYTTNGSLEKVLYS------SNYILDILQRLNIMIDVTSALEYLHFGYSTP 476 (527)
Q Consensus 424 ---------------------~~~~~lv~ey~~~g~L~~~l~~------~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~ 476 (527)
....+++|++ .+|+|.+++.. .+..+++..+..++.|++.||+||| +++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYG 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred hcccCCCCccccccCCCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 0012455555 46899998842 2344677788899999999999999 999
Q ss_pred eEecCCCCCCeeeCCCCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 477 IIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 477 iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
||||||||+|||++.++.+||+|||+++..... ....+| ++||||
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aP 276 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPP 276 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCc
Confidence 999999999999999999999999999875422 223456 889998
No 341
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.83 E-value=7.9e-21 Score=207.43 Aligned_cols=130 Identities=25% Similarity=0.412 Sum_probs=106.9
Q ss_pred CCccccceeccCCceEEEEEEcc--CCcEEEEEEEeec------------------------------cCccce-----e
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ--DGMEFAIKVFHFS------------------------------CSNEDF-----R 427 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~--~~~~vavK~~~~~------------------------------~~~~~~-----~ 427 (527)
+.|++.+.||+|+||.||+|+.. +++.||||++... +...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 67999999999999999999864 6899999987421 111112 5
Q ss_pred EEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 428 ALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 428 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
++||||++|++|.+++.. .+++.++..|+.||+.||+|+| +++||||||||+||+++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 899999999999987743 5889999999999999999999 8999999999999999976 89999999998764
Q ss_pred CCCCccceeccccccccccC
Q 035895 508 GEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 508 ~~~~~~~~~~~~~t~~y~aP 527 (527)
.. ....||++||||
T Consensus 233 ~~------~~~~gt~~y~aP 246 (681)
T 2pzi_A 233 SF------GYLYGTPGFQAP 246 (681)
T ss_dssp CC------SCCCCCTTTSCT
T ss_pred cC------CccCCCccccCH
Confidence 32 234689999999
No 342
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=5.7e-20 Score=179.47 Aligned_cols=173 Identities=23% Similarity=0.335 Sum_probs=144.4
Q ss_pred CCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCC
Q 035895 87 MSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKL 166 (527)
Q Consensus 87 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 166 (527)
+..+++|+.|++++|.++.. + .+..+ ++|+.|++++|.+++..+ +..+++|++|++++|++++. ..+..+++|
T Consensus 42 ~~~l~~L~~L~l~~~~i~~~-~-~~~~l-~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L 114 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIKSV-Q-GIQYL-PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKL 114 (291)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TGGGC-TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTC
T ss_pred hhhcCcccEEEccCCCcccC-h-hHhcC-CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCC
Confidence 45678999999999999875 4 35555 489999999999997665 89999999999999999864 348999999
Q ss_pred CEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCc
Q 035895 167 QFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNL 246 (527)
Q Consensus 167 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~ 246 (527)
+.|++++|++++. +.+..+++|+.|++++|++++. ..+..+++|++|++++|+++.++.
T Consensus 115 ~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~----------------- 173 (291)
T 1h6t_A 115 KSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP----------------- 173 (291)
T ss_dssp CEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-----------------
T ss_pred CEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh-----------------
Confidence 9999999999864 5689999999999999999975 578999999999999999988753
Q ss_pred ccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEccccccee
Q 035895 247 FVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQG 297 (527)
Q Consensus 247 ~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 297 (527)
+..+++|++|++++|.+++ +| .+..+++|+.|++++|+++.
T Consensus 174 --------l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 --------LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp --------GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred --------hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 3455667777777777764 34 37788888888888888874
No 343
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.82 E-value=1.4e-20 Score=186.96 Aligned_cols=137 Identities=29% Similarity=0.357 Sum_probs=100.4
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccceeEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNEDFRALVL 431 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~~~~lv~ 431 (527)
.++|+..+.||+|+||.||+|.. .+|+.||||++... +..++..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 46799999999999999999987 47899999997531 12345668999
Q ss_pred EeccCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 432 EYTTNGSLEKVLYS----SNYILDILQRLNIMIDVTSALEYLHFGYST-PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 432 ey~~~g~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
||+++ +|.+++.. ....+++.....++.+++.|++||| +. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 176 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL 176 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence 99986 88777653 2456788889999999999999999 77 9999999999999999999999999999876
Q ss_pred CCCCCccceeccccccccccC
Q 035895 507 TGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 507 ~~~~~~~~~~~~~~t~~y~aP 527 (527)
.... ......||..|+||
T Consensus 177 ~~~~---~~~~~~gt~~y~aP 194 (327)
T 3aln_A 177 VDSI---AKTRDAGCRPYMAP 194 (327)
T ss_dssp ---------------------
T ss_pred cccc---ccccCCCCccccCc
Confidence 4322 12234588899998
No 344
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.82 E-value=8.1e-21 Score=194.55 Aligned_cols=138 Identities=24% Similarity=0.404 Sum_probs=97.0
Q ss_pred Cccc-cceeccCCceEEEEEEcc---CCcEEEEEEEeec---------------------------c--CccceeEEEEE
Q 035895 386 GFSA-NNLIGRGSFGSVYKARLQ---DGMEFAIKVFHFS---------------------------C--SNEDFRALVLE 432 (527)
Q Consensus 386 ~~~~-~~~lg~G~~g~vy~~~~~---~~~~vavK~~~~~---------------------------~--~~~~~~~lv~e 432 (527)
.|++ .++||+|+||.||+|+.. +++.||||++... + ......++|||
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 3665 458999999999999965 5789999987421 1 23456789999
Q ss_pred eccCCcHHHHHHhcC--------CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeee----CCCCcEEEeec
Q 035895 433 YTTNGSLEKVLYSSN--------YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLL----DDNIVAHLSDF 500 (527)
Q Consensus 433 y~~~g~L~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill----~~~~~~kl~Df 500 (527)
|+++ +|.+++.... ..+++..+..|+.|++.||+||| +.+|+||||||+|||+ +.++.+||+||
T Consensus 101 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 9975 8888775321 23788889999999999999999 9999999999999999 67899999999
Q ss_pred ccccccCCCCCc-cceeccccccccccC
Q 035895 501 GIAKLLTGEDQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 501 g~a~~~~~~~~~-~~~~~~~~t~~y~aP 527 (527)
|+|+........ .......||++|+||
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aP 204 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAP 204 (405)
T ss_dssp TCCC----------------CCCTTCCH
T ss_pred CCceecCCCCcccccCCCceecCcccCc
Confidence 999876532211 122345689999998
No 345
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.82 E-value=6.9e-20 Score=171.23 Aligned_cols=151 Identities=23% Similarity=0.260 Sum_probs=96.8
Q ss_pred eEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEE
Q 035895 66 ELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISI 145 (527)
Q Consensus 66 ~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 145 (527)
.+++++|.++.++..+ .++|++|++++|+++++.+..|..+. +|+.|+|++|.|++..|..|..+++|++|
T Consensus 15 ~v~c~~~~l~~iP~~l--------~~~l~~L~l~~n~i~~i~~~~~~~l~-~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L 85 (220)
T 2v9t_B 15 IVDCRGKGLTEIPTNL--------PETITEIRLEQNTIKVIPPGAFSPYK-KLRRIDLSNNQISELAPDAFQGLRSLNSL 85 (220)
T ss_dssp EEECTTSCCSSCCSSC--------CTTCCEEECCSSCCCEECTTSSTTCT-TCCEEECCSSCCCEECTTTTTTCSSCCEE
T ss_pred EEEcCCCCcCcCCCcc--------CcCCCEEECCCCcCCCcCHhHhhCCC-CCCEEECCCCcCCCcCHHHhhCCcCCCEE
Confidence 3455555555544332 14566777777777665555555543 56666666666666666666666677777
Q ss_pred EeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCC
Q 035895 146 DLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELT 225 (527)
Q Consensus 146 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 225 (527)
+|++|+|+...+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|++++|.+.
T Consensus 86 ~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 86 VLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred ECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 77777766655555666667777777777666666666666666777777777666666666666666666666666654
No 346
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.82 E-value=5.6e-20 Score=196.68 Aligned_cols=190 Identities=21% Similarity=0.268 Sum_probs=154.0
Q ss_pred eEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEE
Q 035895 66 ELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISI 145 (527)
Q Consensus 66 ~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 145 (527)
.+.++.+.+.... .+..++.|+.|++++|.+..+ | .+..+ ++|+.|+|++|.+++..+ +..+++|+.|
T Consensus 25 ~l~l~~~~i~~~~-------~~~~L~~L~~L~l~~n~i~~l-~-~l~~l-~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 25 KDNLKKKSVTDAV-------TQNELNSIDQIIANNSDIKSV-Q-GIQYL-PNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHTTCSCTTSEE-------CHHHHTTCCCCBCTTCCCCCC-T-TGGGC-TTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHhccCCCccccc-------chhcCCCCCEEECcCCCCCCC-h-HHccC-CCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 3456666555421 245678899999999999864 3 45555 479999999999987665 8899999999
Q ss_pred EeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCC
Q 035895 146 DLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELT 225 (527)
Q Consensus 146 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 225 (527)
+|++|++++. ..+..+++|+.|+|++|.+.+. +.+..+++|+.|+|++|++++. ..+..+++|+.|+|++|.|+
T Consensus 93 ~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~ 166 (605)
T 1m9s_A 93 FLDENKIKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQIS 166 (605)
T ss_dssp ECCSSCCCCC--TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCC
T ss_pred ECcCCCCCCC--hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCC
Confidence 9999999863 3688899999999999999853 4588899999999999999875 57889999999999999999
Q ss_pred CCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCCh
Q 035895 226 SIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP 276 (527)
Q Consensus 226 ~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 276 (527)
.+++ +..+++|+.|++++|.+.+. ..+..+++|+.|+|++|.+.+...
T Consensus 167 ~~~~-l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 167 DIVP-LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp CCGG-GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCC
T ss_pred Cchh-hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcc
Confidence 9876 88889999999999988764 468889999999999999876443
No 347
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.82 E-value=2.1e-20 Score=189.21 Aligned_cols=132 Identities=25% Similarity=0.390 Sum_probs=105.4
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccce-----
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNEDF----- 426 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~~----- 426 (527)
.+.|.+.+.||+|+||.||+|+. .+|+.||||++... +...+.
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 46799999999999999999985 56899999998531 111121
Q ss_pred -eEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 427 -RALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 427 -~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
.++||||+. |+|.+++. ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhh---cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 289999998 58888773 34789999999999999999999 89999999999999999999999999999986
Q ss_pred cCCCCCccceeccccccccccC
Q 035895 506 LTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 506 ~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.... .....+|++|+||
T Consensus 194 ~~~~-----~~~~~~t~~y~aP 210 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAP 210 (371)
T ss_dssp -----------CTTCCCTTSCH
T ss_pred cccC-----cCCcccCccccCH
Confidence 5432 2234678899998
No 348
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.82 E-value=1.4e-20 Score=185.96 Aligned_cols=139 Identities=26% Similarity=0.369 Sum_probs=100.8
Q ss_pred hhcCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-------------------------------cCccceeEE
Q 035895 382 RATDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-------------------------------CSNEDFRAL 429 (527)
Q Consensus 382 ~~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-------------------------------~~~~~~~~l 429 (527)
...++|+..+.||+|+||.||+|+.. +|+.||||++... +..++..++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 34577999999999999999999874 7899999997531 223456789
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCeeeCCCCcEEEeecccccccCC
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYST-PIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~ 508 (527)
||||+ ++.+..+.......+++.....++.+++.||+||| +. +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 v~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 99999 56777666554567889999999999999999999 74 999999999999999999999999999987643
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
.. ......+|+.|+||
T Consensus 178 ~~---~~~~~~~~~~y~aP 193 (318)
T 2dyl_A 178 DK---AKDRSAGCAAYMAP 193 (318)
T ss_dssp ------------CCTTCCH
T ss_pred Cc---cccccCCCccccCh
Confidence 22 12234578889998
No 349
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.82 E-value=2.3e-22 Score=213.78 Aligned_cols=120 Identities=30% Similarity=0.325 Sum_probs=73.8
Q ss_pred CceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccc
Q 035895 214 LRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHN 293 (527)
Q Consensus 214 L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 293 (527)
|+.|+|++|+|+++|. +..+++|+.|++++|.+. .+|..++.+++|++|+|++|++++ +| .|+.+++|++|+|++|
T Consensus 443 L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 443 VRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 518 (567)
T ss_dssp CSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred ceEEEecCCCCCCCcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCC
Confidence 5555555555555554 555555555555555555 455566666666666777666664 45 6666777777777777
Q ss_pred cceeec-CCCCCCCCCCCEEeCCCCcccccCccc---hhhhccCCeeE
Q 035895 294 RLQGSI-PNSFDDLVSLESLDLSNNNLSEIIPLS---LEKLLYLNILL 337 (527)
Q Consensus 294 ~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~p~~---~~~l~~L~~L~ 337 (527)
++++.. |..|..+++|+.|+|++|++++.+|.. +..++.|+.|+
T Consensus 519 ~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 519 RLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSIL 566 (567)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEE
T ss_pred CCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccC
Confidence 776554 666667777777777777776655532 23355565554
No 350
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.82 E-value=2.2e-20 Score=184.28 Aligned_cols=137 Identities=28% Similarity=0.342 Sum_probs=110.0
Q ss_pred hcCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec---------------------------------------cC
Q 035895 383 ATDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS---------------------------------------CS 422 (527)
Q Consensus 383 ~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~---------------------------------------~~ 422 (527)
-.++|++.+.||+|+||.||+|+. .+++.||||+++.. +.
T Consensus 29 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~ 108 (312)
T 2iwi_A 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFE 108 (312)
T ss_dssp ----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-
T ss_pred hhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEe
Confidence 356799999999999999999986 56899999997421 11
Q ss_pred ccceeEEEEEe-ccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC-CCCcEEEeec
Q 035895 423 NEDFRALVLEY-TTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD-DNIVAHLSDF 500 (527)
Q Consensus 423 ~~~~~~lv~ey-~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~-~~~~~kl~Df 500 (527)
.++..++|||| +++++|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++ +++.+||+||
T Consensus 109 ~~~~~~~v~e~~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~df 184 (312)
T 2iwi_A 109 TQEGFMLVLERPLPAQDLFDYITEKG-PLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDF 184 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHHHC-SCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred cCCeEEEEEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEEc
Confidence 22345799999 78999999997643 5789999999999999999999 89999999999999999 8899999999
Q ss_pred ccccccCCCCCccceeccccccccccC
Q 035895 501 GIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 501 g~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
|+++...... .....+|..|+||
T Consensus 185 g~~~~~~~~~----~~~~~~~~~y~aP 207 (312)
T 2iwi_A 185 GSGALLHDEP----YTDFDGTRVYSPP 207 (312)
T ss_dssp SSCEECCSSC----BCCCCSCTTTSCH
T ss_pred chhhhcccCc----ccccCCcccccCc
Confidence 9998775332 2234578889998
No 351
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.82 E-value=1e-19 Score=170.11 Aligned_cols=156 Identities=23% Similarity=0.293 Sum_probs=118.2
Q ss_pred cEEEeecCcccccCcccccCCCCCCEEeccCcccccccC-hhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCC
Q 035895 143 ISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIP-NVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDS 221 (527)
Q Consensus 143 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 221 (527)
+++++++|.++.+ |..+ .+.++.|++++|++++..| ..|..+++|+.|+|++|+|++..+.+|.++++|++|+|++
T Consensus 14 ~~l~~s~n~l~~i-P~~~--~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 14 TTVDCSNQKLNKI-PEHI--PQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp TEEECCSSCCSSC-CSCC--CTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEeEeCCCCcccC-ccCC--CCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 4778888887753 4333 2345777777777776543 3467777777777777777776666777777777777777
Q ss_pred CCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCC
Q 035895 222 NELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPN 301 (527)
Q Consensus 222 N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 301 (527)
|+++.+| +..|..+++|++|+|++|++.+..|..|.++++|++|+|++|++++..|.
T Consensus 91 N~l~~~~-----------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 147 (220)
T 2v70_A 91 NRLENVQ-----------------------HKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPG 147 (220)
T ss_dssp SCCCCCC-----------------------GGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTT
T ss_pred CccCccC-----------------------HhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHH
Confidence 7776654 34566778888888888888888888888889999999999999888888
Q ss_pred CCCCCCCCCEEeCCCCcccccCc
Q 035895 302 SFDDLVSLESLDLSNNNLSEIIP 324 (527)
Q Consensus 302 ~~~~l~~L~~L~ls~N~l~~~~p 324 (527)
.|..+++|+.|++++|++....+
T Consensus 148 ~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 148 AFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTTTCTTCCEEECCSCCEECSGG
T ss_pred HhcCCCCCCEEEecCcCCcCCCc
Confidence 89999999999999998876543
No 352
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=2.1e-22 Score=214.09 Aligned_cols=204 Identities=18% Similarity=0.126 Sum_probs=152.6
Q ss_pred CCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCc-------------cccccchhhcCCcCCcEEE-eecCccc
Q 035895 88 SNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCN-------------ISGGISEEIGNLTDLISID-LGGNKLN 153 (527)
Q Consensus 88 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~-------------l~~~~~~~~~~l~~L~~L~-L~~N~l~ 153 (527)
..++.|+.|+|++|+++. +|..++.+. +|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~~-Lp~~i~~l~-~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKSTV-LQSELESCK-ELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp STTTTSSSCCCCHHHHHH-HHHHHHHHH-HHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred ccCccceeccCChhhHHh-hHHHHHHHH-HHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc
Confidence 455667777777777763 566666654 57777765553 3334445555555555555 4444332
Q ss_pred ccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhC
Q 035895 154 GSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN 233 (527)
Q Consensus 154 ~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~ 233 (527)
.|..+.+++|.++.. |. ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|+|+.+|..+..
T Consensus 424 -----------~L~~l~l~~n~i~~l-~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~ 484 (567)
T 1dce_A 424 -----------DLRSKFLLENSVLKM-EY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAA 484 (567)
T ss_dssp -----------HHHHHHHHHHHHHHH-HH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGG
T ss_pred -----------hhhhhhhhccccccc-Cc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhc
Confidence 233344555555432 11 258999999999997 566 99999999999999999999999999
Q ss_pred CCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCC-hhhhhcCCCCCEEEcccccceeecCCC---CCCCCCC
Q 035895 234 LKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDI-PTTIQGLKSLQFLSLGHNRLQGSIPNS---FDDLVSL 309 (527)
Q Consensus 234 l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L 309 (527)
+++|+.|++++|.+++ +| .++.+++|++|+|++|++++.. |..|+.+++|+.|+|++|++++.+|.. +..+++|
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L 562 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 562 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTC
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCccc
Confidence 9999999999999997 56 8999999999999999999887 999999999999999999999765532 2347899
Q ss_pred CEEeC
Q 035895 310 ESLDL 314 (527)
Q Consensus 310 ~~L~l 314 (527)
+.|++
T Consensus 563 ~~L~l 567 (567)
T 1dce_A 563 SSILT 567 (567)
T ss_dssp SEEEC
T ss_pred CccCC
Confidence 99875
No 353
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.81 E-value=3.8e-20 Score=182.90 Aligned_cols=138 Identities=25% Similarity=0.348 Sum_probs=103.7
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-----------------------------c------------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-----------------------------C------------ 421 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-----------------------------~------------ 421 (527)
.+.|++.+.||+|+||.||+|+.. +++.||||++... +
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 357899999999999999999875 5899999987421 0
Q ss_pred --CccceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeC-CCCcEEEe
Q 035895 422 --SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLD-DNIVAHLS 498 (527)
Q Consensus 422 --~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~-~~~~~kl~ 498 (527)
......++||||++ |+|.+++.. ..+++.....++.|++.||+||| +++|+||||||+||+++ +++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEc
Confidence 12346689999998 599999854 45788889999999999999999 89999999999999997 67899999
Q ss_pred ecccccccCCCCCc-cceeccccccccccC
Q 035895 499 DFGIAKLLTGEDQS-MTQTQTLAIIGYMAP 527 (527)
Q Consensus 499 Dfg~a~~~~~~~~~-~~~~~~~~t~~y~aP 527 (527)
|||+++........ .......+|.+|+||
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aP 193 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSP 193 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCH
T ss_pred cCccccccCCCcccccccccccccccccCc
Confidence 99999876432111 112234568889998
No 354
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=1.3e-19 Score=169.39 Aligned_cols=153 Identities=24% Similarity=0.327 Sum_probs=121.3
Q ss_pred cEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCC
Q 035895 143 ISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSN 222 (527)
Q Consensus 143 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 222 (527)
+.+++++|.++.+ |..+. ++|+.|++++|++++..+..|..+++|+.|+|++|+|++..|.+|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~i-P~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTEI-PTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSSC-CSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCcC-CCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 5778888888754 43332 67888888888888766667888888888888888888777888888888888888888
Q ss_pred CCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCC
Q 035895 223 ELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNS 302 (527)
Q Consensus 223 ~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 302 (527)
+|+.+|. ..|..+++|++|+|++|++.+..|..|.++++|++|+|++|++++..+..
T Consensus 91 ~l~~l~~-----------------------~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 147 (220)
T 2v9t_B 91 KITELPK-----------------------SLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGT 147 (220)
T ss_dssp CCCCCCT-----------------------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred cCCccCH-----------------------hHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHH
Confidence 8877654 34566778888888888888888888888888888888888888777778
Q ss_pred CCCCCCCCEEeCCCCcccc
Q 035895 303 FDDLVSLESLDLSNNNLSE 321 (527)
Q Consensus 303 ~~~l~~L~~L~ls~N~l~~ 321 (527)
|..+++|+.|++++|++..
T Consensus 148 ~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 148 FSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTCTTCCEEECCSSCEEC
T ss_pred HhCCCCCCEEEeCCCCcCC
Confidence 8888889999999998864
No 355
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.81 E-value=1.9e-20 Score=193.53 Aligned_cols=137 Identities=27% Similarity=0.397 Sum_probs=99.6
Q ss_pred ccccceeccCCceEEEEEEccCCcEEEEEEEeec---------------------------cCccceeEEEEEeccCCcH
Q 035895 387 FSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS---------------------------CSNEDFRALVLEYTTNGSL 439 (527)
Q Consensus 387 ~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~---------------------------~~~~~~~~lv~ey~~~g~L 439 (527)
|...+.||+|+||+||.+...+|+.||||++... +..++..++|||||. |+|
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 4556889999999998877778999999987431 123456789999996 699
Q ss_pred HHHHHhcCCCC------CHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCC-------------CcEEEeec
Q 035895 440 EKVLYSSNYIL------DILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDN-------------IVAHLSDF 500 (527)
Q Consensus 440 ~~~l~~~~~~~------~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~-------------~~~kl~Df 500 (527)
.+++....... .+..+..++.||+.||+||| +++|+||||||+||+++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99997643211 22234679999999999999 9999999999999999654 58999999
Q ss_pred ccccccCCCCCcc--ceeccccccccccC
Q 035895 501 GIAKLLTGEDQSM--TQTQTLAIIGYMAP 527 (527)
Q Consensus 501 g~a~~~~~~~~~~--~~~~~~~t~~y~aP 527 (527)
|+|+......... ......||++||||
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aP 201 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAP 201 (434)
T ss_dssp TTCEECCC--------------CCTTSCH
T ss_pred ccceecCCCCccceeeecCCCCCCCccCH
Confidence 9999875432211 12235689999998
No 356
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.81 E-value=3.3e-20 Score=187.62 Aligned_cols=135 Identities=22% Similarity=0.342 Sum_probs=110.3
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec---------------------------------------cC-
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS---------------------------------------CS- 422 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~---------------------------------------~~- 422 (527)
.++|++.+.||+|+||.||+|+. .+++.||||++... +.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 35799999999999999999985 57899999997521 00
Q ss_pred ---ccceeEEEEEeccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCC-CeEecCCCCCCeeeC------C
Q 035895 423 ---NEDFRALVLEYTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYST-PIIHCDLKPHNKLLD------D 491 (527)
Q Consensus 423 ---~~~~~~lv~ey~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~-~iiHrdlk~~nill~------~ 491 (527)
.....++||||+ +++|.+++.... ..+++..+..++.|++.||+||| ++ +|+||||||+||+++ .
T Consensus 98 ~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTT
T ss_pred cCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcC
Confidence 111568999999 889999997643 45888899999999999999999 87 999999999999994 4
Q ss_pred CCcEEEeecccccccCCCCCccceeccccccccccC
Q 035895 492 NIVAHLSDFGIAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 492 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.+.+||+|||+|+..... .+...+|+.|+||
T Consensus 174 ~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aP 204 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH-----YTNSIQTREYRSP 204 (373)
T ss_dssp EEEEEECCCTTCEETTBC-----CCSCCSCGGGCCH
T ss_pred cceEEEcccccccccCCC-----CCCCCCCccccCc
Confidence 458999999999876432 1234678999998
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.81 E-value=1.2e-20 Score=181.46 Aligned_cols=168 Identities=20% Similarity=0.243 Sum_probs=98.9
Q ss_pred CcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCC
Q 035895 142 LISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDS 221 (527)
Q Consensus 142 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 221 (527)
++.+++++|.+++.. .+..+++|+.|++++|.++ .+| .+..+++|+.|++++|++++..| +..+++|++|++++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 334444444444322 2344444444444444444 222 34444555555555555544332 45555555555555
Q ss_pred CCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCC
Q 035895 222 NELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPN 301 (527)
Q Consensus 222 N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 301 (527)
|+++++|.... ++|+.|++++|.+.+. +.+..+++|++|++++|++++. | .+..+++|++|++++|++++. .
T Consensus 95 N~l~~l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~ 166 (263)
T 1xeu_A 95 NRLKNLNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--G 166 (263)
T ss_dssp SCCSCCTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--T
T ss_pred CccCCcCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--H
Confidence 55555443222 4555555555555442 2466778888888888888754 4 678888888888888888765 6
Q ss_pred CCCCCCCCCEEeCCCCcccccC
Q 035895 302 SFDDLVSLESLDLSNNNLSEII 323 (527)
Q Consensus 302 ~~~~l~~L~~L~ls~N~l~~~~ 323 (527)
.+..+++|+.|++++|++++..
T Consensus 167 ~l~~l~~L~~L~l~~N~~~~~~ 188 (263)
T 1xeu_A 167 GLTRLKKVNWIDLTGQKCVNEP 188 (263)
T ss_dssp TSTTCCCCCEEEEEEEEEECCC
T ss_pred HhccCCCCCEEeCCCCcccCCc
Confidence 7788888888888888887653
No 358
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.81 E-value=3.6e-20 Score=180.42 Aligned_cols=137 Identities=26% Similarity=0.445 Sum_probs=112.4
Q ss_pred cCCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec-------------------------------cCccceeEEEE
Q 035895 384 TDGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS-------------------------------CSNEDFRALVL 431 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~-------------------------------~~~~~~~~lv~ 431 (527)
.+.|++.+.||+|+||.||+|+.. +++.||||++... +...+..++||
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 457999999999999999999875 7899999997431 12335668999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEeecccccccCC
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~---~~~~kl~Dfg~a~~~~~ 508 (527)
||+++++|.+.+...+ .+++.+...++.+++.||+||| +.+|+||||||+||+++. ++.+|++|||+++....
T Consensus 101 e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 101 ELYTGGELFDEIIKRK-RFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp CCCCSCBHHHHHHHHS-SCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EccCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 9999999999886543 5788899999999999999999 899999999999999975 35799999999987643
Q ss_pred CCCccceeccccccccccC
Q 035895 509 EDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 509 ~~~~~~~~~~~~t~~y~aP 527 (527)
... .....+|..|+||
T Consensus 177 ~~~---~~~~~~~~~y~aP 192 (287)
T 2wei_A 177 NTK---MKDRIGTAYYIAP 192 (287)
T ss_dssp CSS---CSCHHHHHTTCCH
T ss_pred CCc---cccccCcccccCh
Confidence 321 1234578889998
No 359
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=3.3e-19 Score=167.73 Aligned_cols=135 Identities=23% Similarity=0.196 Sum_probs=74.4
Q ss_pred cCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeC
Q 035895 140 TDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHL 219 (527)
Q Consensus 140 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 219 (527)
++|++|+|++|++++..+..|..+++|+.|+|++|+++...+..|..+++|+.|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 44555555555555544555555555555555555555444444555556666666666665555555566666666666
Q ss_pred CCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCC
Q 035895 220 DSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGD 274 (527)
Q Consensus 220 ~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 274 (527)
++|+|+.+|..+..+++|+.|++++|.+.+..+..+..+++|++|++++|.+...
T Consensus 120 s~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 120 CCNKLTELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp CSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTT
T ss_pred cCCcccccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCC
Confidence 6666665555444444444444444444433344455566666666666666543
No 360
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.81 E-value=3.3e-21 Score=207.30 Aligned_cols=322 Identities=15% Similarity=0.112 Sum_probs=172.0
Q ss_pred hhhcchhccc-CCCceeecCchhhh-cCCCCCEEEccccc-cccc-c------ccccceEEcccccccCCCCCCcccccC
Q 035895 18 DVCYRICTID-SQNKLVGIVSITIF-NLSTLKVFDVDNNY-VLGR-L------SSIVDELSLSDNYLTSSTPELSFLSSM 87 (527)
Q Consensus 18 ~~~~~~~~~~-s~N~l~~~~~~~~~-~l~~L~~L~Ls~N~-~~~~-~------~~~l~~L~Ls~N~l~~~~~~~~~~~~~ 87 (527)
..|..+..++ ++|.+++..+..+. .+++|+.|+|++|. +... + -+.+++|+|++|.++...... +....
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~-l~~~~ 180 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHW-LSHFP 180 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGG-GGGSC
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHH-HHHHh
Confidence 3466788888 78888877776665 79999999999883 3221 1 135899999999987643221 11223
Q ss_pred CCCCCCCEEEcccCC--CCcc-cChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCc-------------
Q 035895 88 SNCKYLKKLDISRNP--LDGF-LPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNK------------- 151 (527)
Q Consensus 88 ~~l~~L~~L~Ls~N~--l~~~-~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~------------- 151 (527)
..+++|++|++++|. +... ++..+.. .++|+.|++++|.-.+.++..+..+++|++|+++.+.
T Consensus 181 ~~~~~L~~L~l~~~~~~~~~~~l~~l~~~-~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~ 259 (594)
T 2p1m_B 181 DTYTSLVSLNISCLASEVSFSALERLVTR-CPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSV 259 (594)
T ss_dssp TTCCCCCEEECTTCCSCCCHHHHHHHHHH-CTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHH
T ss_pred hcCCcCcEEEecccCCcCCHHHHHHHHHh-CCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHH
Confidence 478899999999987 3211 1111223 3579999999883222356666666667777644331
Q ss_pred -------------cc----ccCcccccCCCCCCEEeccCccccccc-ChhhhcCcccCeeeeecccCCCC-CCccccCCc
Q 035895 152 -------------LN----GSISITLGKLQKLQFLSFRGNELEGSI-PNVLCHLAVLFQLDLRGNKLSGS-IPTCFGNLT 212 (527)
Q Consensus 152 -------------l~----~~~~~~~~~l~~L~~L~l~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~ 212 (527)
+. +.++..+..+++|+.|++++|.+++.. +..+..+++|+.|++++| +... ++.....++
T Consensus 260 ~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~ 338 (594)
T 2p1m_B 260 ALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCK 338 (594)
T ss_dssp HHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCT
T ss_pred HHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCC
Confidence 11 112222234677777777777765332 223456677777777766 3211 111223456
Q ss_pred cCceeeCC---------CCCCCC--CchhhhCCCCccEEEccCCcccccCCcccc-CCCCCCEEEcc--C----CCCCCC
Q 035895 213 ALRNLHLD---------SNELTS--IPSILWNLKDILYLDFWSNLFVGPLPSKIG-NLKVLTRIDFS--R----NNLLGD 274 (527)
Q Consensus 213 ~L~~L~L~---------~N~l~~--lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~ 274 (527)
+|++|+++ .+.++. +......+++|+.|.+..|.+++..+..+. .+++|+.|+++ + |.+++.
T Consensus 339 ~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~ 418 (594)
T 2p1m_B 339 DLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLE 418 (594)
T ss_dssp TCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCC
T ss_pred CCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCC
Confidence 66666662 233332 111122355555555555555443333332 35555666655 2 333321
Q ss_pred C-----hhhhhcCCCCCEEEcccccceeecCCCCCC-CCCCCEEeCCCCcccccCccch-hhhccCCeeEeeeeee
Q 035895 275 I-----PTTIQGLKSLQFLSLGHNRLQGSIPNSFDD-LVSLESLDLSNNNLSEIIPLSL-EKLLYLNILLIVVVIL 343 (527)
Q Consensus 275 ~-----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~ls~N~l~~~~p~~~-~~l~~L~~L~~~~~~~ 343 (527)
. +..+..+++|+.|++++ .+++..+..+.. +++|+.|++++|.+++..+..+ ..++.|+.|+++.+.+
T Consensus 419 ~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 419 PLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp CTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred chhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 1 11244455555555544 333322222222 4455555555555544333322 3445555555554443
No 361
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.81 E-value=1e-19 Score=178.44 Aligned_cols=122 Identities=29% Similarity=0.432 Sum_probs=104.5
Q ss_pred cCCcccc-ceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------c----CccceeEEEEE
Q 035895 384 TDGFSAN-NLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------C----SNEDFRALVLE 432 (527)
Q Consensus 384 ~~~~~~~-~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------~----~~~~~~~lv~e 432 (527)
.++|.+. +.||+|+||.||+|.. .+++.||+|++... + ......++|||
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 95 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVME 95 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEC
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecccHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEe
Confidence 4567776 7899999999999986 57899999997531 1 12456789999
Q ss_pred eccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCC---CCcEEEeecccccccCC
Q 035895 433 YTTNGSLEKVLYSSN-YILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDD---NIVAHLSDFGIAKLLTG 508 (527)
Q Consensus 433 y~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~---~~~~kl~Dfg~a~~~~~ 508 (527)
|+++|+|.+++.... ..+++..+..++.|++.||+||| +++|+||||||+||+++. ++.+||+|||+|+....
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 172 (299)
T 3m2w_A 96 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG 172 (299)
T ss_dssp CCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc
Confidence 999999999998653 35889999999999999999999 999999999999999997 78999999999987654
No 362
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.80 E-value=4.3e-20 Score=185.55 Aligned_cols=132 Identities=25% Similarity=0.388 Sum_probs=105.6
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec-------------------------------cCccc------
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS-------------------------------CSNED------ 425 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~-------------------------------~~~~~------ 425 (527)
.+.|...+.||+|+||.||+|+. .+|+.||||++... +...+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46799999999999999999986 57899999997421 01111
Q ss_pred eeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 426 FRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 426 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
..++||||++ |+|.+++. ..+++.++..++.|++.||+||| +++|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMG---LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CCEEEEECCS-EEGGGTTT---SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred eEEEEecccc-CCHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 2489999998 58887763 24788899999999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCccceeccccccccccC
Q 035895 506 LTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 506 ~~~~~~~~~~~~~~~t~~y~aP 527 (527)
.... .+...+|.+|+||
T Consensus 176 ~~~~-----~~~~~~t~~y~aP 192 (353)
T 3coi_A 176 ADAE-----MTGYVVTRWYRAP 192 (353)
T ss_dssp -------------CCSBCCSCH
T ss_pred CCCC-----ccccccCcCcCCH
Confidence 5422 2234678899998
No 363
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.80 E-value=4.1e-19 Score=167.03 Aligned_cols=153 Identities=21% Similarity=0.236 Sum_probs=116.7
Q ss_pred cceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCc
Q 035895 64 VDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLI 143 (527)
Q Consensus 64 l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 143 (527)
.+.++.+++.++.++..+ .++|++|+|++|++++..|..+..+. +|+.|+|++|.|+...+..|..+++|+
T Consensus 21 ~~~v~c~~~~l~~ip~~~--------~~~L~~L~Ls~n~i~~~~~~~~~~l~-~L~~L~L~~N~l~~i~~~~~~~l~~L~ 91 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGI--------PTNAQILYLHDNQITKLEPGVFDSLI-NLKELYLGSNQLGALPVGVFDSLTQLT 91 (229)
T ss_dssp TTEEECTTSCCSSCCSCC--------CTTCSEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred CCEeEccCCCcCccCCCC--------CCCCCEEEcCCCccCccCHHHhhCcc-CCcEEECCCCCCCCcChhhcccCCCcC
Confidence 456777777777766543 26788888888888877777776664 688888888888776667777888888
Q ss_pred EEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCC
Q 035895 144 SIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNE 223 (527)
Q Consensus 144 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 223 (527)
+|+|++|++++..+..|..+++|+.|++++|+++ .+|..+..+++|+.|+|++|+|++..+..|..+++|+.|++++|.
T Consensus 92 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 170 (229)
T 3e6j_A 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNP 170 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred EEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCC
Confidence 8888888888776767778888888888888887 667777788888888888888887766777788888888888887
Q ss_pred CCC
Q 035895 224 LTS 226 (527)
Q Consensus 224 l~~ 226 (527)
+..
T Consensus 171 ~~c 173 (229)
T 3e6j_A 171 WDC 173 (229)
T ss_dssp BCT
T ss_pred ccC
Confidence 764
No 364
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.79 E-value=4.2e-20 Score=197.34 Aligned_cols=138 Identities=31% Similarity=0.437 Sum_probs=110.6
Q ss_pred cCCccccceeccCCceEEEEEEc-cCCcEEEEEEEeec------------------------------c------Cccce
Q 035895 384 TDGFSANNLIGRGSFGSVYKARL-QDGMEFAIKVFHFS------------------------------C------SNEDF 426 (527)
Q Consensus 384 ~~~~~~~~~lg~G~~g~vy~~~~-~~~~~vavK~~~~~------------------------------~------~~~~~ 426 (527)
.+.|++.+.||+|+||.||+|+. .+|+.||||++... + ...+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 47799999999999999999986 56899999986421 1 11455
Q ss_pred eEEEEEeccCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCc---EEEeecc
Q 035895 427 RALVLEYTTNGSLEKVLYSSNY--ILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIV---AHLSDFG 501 (527)
Q Consensus 427 ~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~---~kl~Dfg 501 (527)
.++|||||+||+|.+++...+. .+++..+..++.+++.||+||| +.+|+||||||+||+++.++. +|++|||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 6899999999999999976432 4777788899999999999999 899999999999999986654 9999999
Q ss_pred cccccCCCCCccceeccccccccccC
Q 035895 502 IAKLLTGEDQSMTQTQTLAIIGYMAP 527 (527)
Q Consensus 502 ~a~~~~~~~~~~~~~~~~~t~~y~aP 527 (527)
+++....... .....+|.+|+||
T Consensus 170 ~a~~~~~~~~---~~~~~gt~~Y~AP 192 (676)
T 3qa8_A 170 YAKELDQGEL---CTEFVGTLQYLAP 192 (676)
T ss_dssp CCCBTTSCCC---CCCCCSCCTTCSS
T ss_pred cccccccccc---cccccCCcccCCh
Confidence 9987754321 2345688999998
No 365
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.79 E-value=1e-19 Score=176.55 Aligned_cols=115 Identities=16% Similarity=0.163 Sum_probs=94.4
Q ss_pred hhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeecc---------------------------------------
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFSC--------------------------------------- 421 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~--------------------------------------- 421 (527)
.....-|++.+.||+|+||.||+|+..+|+.||||+++...
T Consensus 86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~ 165 (282)
T 1zar_A 86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLA 165 (282)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCC
Confidence 33445577789999999999999999789999999985210
Q ss_pred ----CccceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEE
Q 035895 422 ----SNEDFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHL 497 (527)
Q Consensus 422 ----~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl 497 (527)
...+..++||||++||+|.+ +.. + ....++.|++.|++|+| +.+|+||||||+|||++ ++.+||
T Consensus 166 v~~~~~~~~~~lvmE~~~g~~L~~-l~~-----~--~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 166 VPKVYAWEGNAVLMELIDAKELYR-VRV-----E--NPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp SCCEEEEETTEEEEECCCCEEGGG-CCC-----S--CHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE-TTEEEE
T ss_pred cCeEEeccceEEEEEecCCCcHHH-cch-----h--hHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE-CCcEEE
Confidence 01234579999999999988 421 1 24468999999999999 99999999999999999 999999
Q ss_pred eecccccccC
Q 035895 498 SDFGIAKLLT 507 (527)
Q Consensus 498 ~Dfg~a~~~~ 507 (527)
+|||+|+...
T Consensus 234 ~DFG~a~~~~ 243 (282)
T 1zar_A 234 IDFPQSVEVG 243 (282)
T ss_dssp CCCTTCEETT
T ss_pred EECCCCeECC
Confidence 9999998764
No 366
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=4.4e-20 Score=202.21 Aligned_cols=222 Identities=22% Similarity=0.235 Sum_probs=97.3
Q ss_pred CCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEe
Q 035895 91 KYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLS 170 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 170 (527)
+.++.|+|++|.+... +.. .++.++|++|.|.+ +++..|++. ..+..+..+++|+.|+
T Consensus 173 ~~~~~l~L~~n~~~~~-~~~------~l~~l~Ls~~~i~~--------------~~~~~n~~~-~~~~~~~~l~~L~~L~ 230 (727)
T 4b8c_D 173 PLTPKIELFANGKDEA-NQA------LLQHKKLSQYSIDE--------------DDDIENRMV-MPKDSKYDDQLWHALD 230 (727)
T ss_dssp -----------------------------------------------------------------------CCCCCCEEE
T ss_pred CccceEEeeCCCCCcc-hhh------HhhcCccCcccccC--------------cccccccee-cChhhhccCCCCcEEE
Confidence 4567777777776642 221 25555666665442 234445544 4455666667777777
Q ss_pred ccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCccccc
Q 035895 171 FRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGP 250 (527)
Q Consensus 171 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~ 250 (527)
|++|.+. .+|..+..+++|+.|+|++|.|+ .+|..|+++++|++|+|++|+|+.+|..+..+++|++|++++|.+. .
T Consensus 231 Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~ 307 (727)
T 4b8c_D 231 LSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-T 307 (727)
T ss_dssp CTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-C
T ss_pred CCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-c
Confidence 7777766 45555556777777777777776 5666677777777777777777777777777777777777777665 5
Q ss_pred CCccccCCCCCCEEEccCCCCCCCChhhhhcCCC-CCEEEcccccceeecCCCCCCCCCCCEEeCCCC--------cccc
Q 035895 251 LPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKS-LQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNN--------NLSE 321 (527)
Q Consensus 251 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N--------~l~~ 321 (527)
+|..|+.+++|++|+|++|.+++.+|..+..+.. +..|+|++|.+++.+|.. |+.|+++.| .+.+
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~~~~~l~~ 381 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQREYDSLQQ 381 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------------------
T ss_pred cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecccccccccCCccc
Confidence 5666778888888888888888777777655422 224678888887777654 444556655 3444
Q ss_pred cCccchhhhccCCeeEeeeeee
Q 035895 322 IIPLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 322 ~~p~~~~~l~~L~~L~~~~~~~ 343 (527)
..+..+..+..+....++.+.+
T Consensus 382 ~~~~~~~~l~~~~~~~ls~Nil 403 (727)
T 4b8c_D 382 STEHLATDLAKRTFTVLSYNTL 403 (727)
T ss_dssp --------------------CC
T ss_pred cccchhhcccccceeeeecccc
Confidence 4444445555555555555554
No 367
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.78 E-value=4.6e-20 Score=195.14 Aligned_cols=125 Identities=19% Similarity=0.270 Sum_probs=92.0
Q ss_pred cccceeccCCceEEEEEEccCCcEEEEEEEee-------------------------------------ccCccceeEEE
Q 035895 388 SANNLIGRGSFGSVYKARLQDGMEFAIKVFHF-------------------------------------SCSNEDFRALV 430 (527)
Q Consensus 388 ~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~-------------------------------------~~~~~~~~~lv 430 (527)
...+.||+|+||+||+|+. .++.+|+|+... .+..++..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 3457899999999999954 467889987521 01123345899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccCCCC
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLTGED 510 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~~~~ 510 (527)
|||++||+|.+++.. +..++.|+++||+||| +++|+||||||+|||+++ .+||+|||+|+......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999854 4578999999999999 999999999999999998 99999999999875322
Q ss_pred Ccc-----ceeccccccccccC
Q 035895 511 QSM-----TQTQTLAIIGYMAP 527 (527)
Q Consensus 511 ~~~-----~~~~~~~t~~y~aP 527 (527)
... ......||++||||
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~AP 505 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFD 505 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHH
T ss_pred ccccchhhhhhhhcCCCCcCCH
Confidence 111 11245689999998
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.78 E-value=2.3e-20 Score=204.45 Aligned_cols=150 Identities=25% Similarity=0.231 Sum_probs=88.5
Q ss_pred cccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccc
Q 035895 98 ISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELE 177 (527)
Q Consensus 98 Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 177 (527)
++.|.+. ..|..+..+. .|+.|+|++|.+. .+|..+..+++|++|+|++|+|+ .+|..|+.+++|+.|+|++|.|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~-~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQ-LWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ---------------CCC-CCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred cccccee-cChhhhccCC-CCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 3444444 3445555543 5777777777776 44455556777777777777777 55666777777777777777777
Q ss_pred cccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCC-chhhhCCC-CccEEEccCCcccccCCc
Q 035895 178 GSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSI-PSILWNLK-DILYLDFWSNLFVGPLPS 253 (527)
Q Consensus 178 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l-p~~~~~l~-~L~~l~l~~n~~~~~~p~ 253 (527)
.+|..|..+++|++|+|++|.|+ .+|..|+++++|++|+|++|.|++. |..+..+. .+..+++++|.+.+.+|.
T Consensus 284 -~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~ 359 (727)
T 4b8c_D 284 -SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH 359 (727)
T ss_dssp -SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_pred -ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc
Confidence 56777777777777777777776 4566677777777777777777763 33333221 112345566666655554
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.78 E-value=2.9e-19 Score=171.76 Aligned_cols=170 Identities=21% Similarity=0.268 Sum_probs=93.3
Q ss_pred CCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEE
Q 035895 90 CKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFL 169 (527)
Q Consensus 90 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 169 (527)
+.++..+++++|.+++.. .+..+. +|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +..+++|+.|
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~-~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELS-GVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHT-TCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcC-cCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 344555555555555432 233332 455555555555532 2 44555555555555555554333 5555555555
Q ss_pred eccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccc
Q 035895 170 SFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVG 249 (527)
Q Consensus 170 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~ 249 (527)
++++|++++ +|.. .. ++|+.|++++|++ +.+| .+..+++|+.|++++|++.+
T Consensus 91 ~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l------------------------~~~~-~l~~l~~L~~L~Ls~N~i~~ 142 (263)
T 1xeu_A 91 SVNRNRLKN-LNGI-PS-ACLSRLFLDNNEL------------------------RDTD-SLIHLKNLEILSIRNNKLKS 142 (263)
T ss_dssp ECCSSCCSC-CTTC-CC-SSCCEEECCSSCC------------------------SBSG-GGTTCTTCCEEECTTSCCCB
T ss_pred ECCCCccCC-cCcc-cc-CcccEEEccCCcc------------------------CCCh-hhcCcccccEEECCCCcCCC
Confidence 555555543 2221 11 4455555555554 4443 24444444444554444443
Q ss_pred cCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceee
Q 035895 250 PLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGS 298 (527)
Q Consensus 250 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 298 (527)
. +.+..+++|++|++++|++.+. ..+..+++|+.|++++|+++..
T Consensus 143 ~--~~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 143 I--VMLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--GGGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred C--hHHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 2 2456677788888888888765 5678888888888888888754
No 370
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.78 E-value=3.6e-19 Score=173.37 Aligned_cols=114 Identities=13% Similarity=0.033 Sum_probs=97.5
Q ss_pred CCccccceeccCCceEEEEEEcc-CCcEEEEEEEeec--------------------------------cCccceeEEEE
Q 035895 385 DGFSANNLIGRGSFGSVYKARLQ-DGMEFAIKVFHFS--------------------------------CSNEDFRALVL 431 (527)
Q Consensus 385 ~~~~~~~~lg~G~~g~vy~~~~~-~~~~vavK~~~~~--------------------------------~~~~~~~~lv~ 431 (527)
+.|++.+.||+|+||.||+|+.. +++.||||+++.. +..++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56999999999999999999875 5899999997531 12345678999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccccc
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAK 504 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~ 504 (527)
||++|++|.+++... ....+...++.|++.||+||| +++|+||||||+||+++.++.+||+++|...
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~~~~ 177 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPATMP 177 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCCCCT
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEeccccC
Confidence 999999999998532 355578889999999999999 9999999999999999999999999887654
No 371
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.78 E-value=1.6e-20 Score=201.93 Aligned_cols=319 Identities=15% Similarity=0.108 Sum_probs=212.8
Q ss_pred hhcchhccc-CCC-ceeec-CchhhhcCCCCCEEEccccccccccc----------cccceEEcccccccCCCCCCcccc
Q 035895 19 VCYRICTID-SQN-KLVGI-VSITIFNLSTLKVFDVDNNYVLGRLS----------SIVDELSLSDNYLTSSTPELSFLS 85 (527)
Q Consensus 19 ~~~~~~~~~-s~N-~l~~~-~~~~~~~l~~L~~L~Ls~N~~~~~~~----------~~l~~L~Ls~N~l~~~~~~~~~~~ 85 (527)
.|..+..++ +.| .++.. .+..+.++++|++|+|++|.+.+..+ ..++.|+|++|. ..+... .+..
T Consensus 128 ~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~-~~~~~~-~l~~ 205 (594)
T 2p1m_B 128 SFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA-SEVSFS-ALER 205 (594)
T ss_dssp HCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC-SCCCHH-HHHH
T ss_pred hCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC-CcCCHH-HHHH
Confidence 467888888 666 55543 44555689999999999998643211 257899999886 221110 0111
Q ss_pred cCCCCCCCCEEEcccC-CCCcccChhHhhccccccEEEcccCc--------------------------cc----cccch
Q 035895 86 SMSNCKYLKKLDISRN-PLDGFLPRVVGNFSQSLEFIWMSDCN--------------------------IS----GGISE 134 (527)
Q Consensus 86 ~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~L~~L~Ls~n~--------------------------l~----~~~~~ 134 (527)
.+..+++|++|++++| .+.+ +|..+..+. +|+.|+++.+. +. ..++.
T Consensus 206 l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~-~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~ 283 (594)
T 2p1m_B 206 LVTRCPNLKSLKLNRAVPLEK-LATLLQRAP-QLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPA 283 (594)
T ss_dssp HHHHCTTCCEEECCTTSCHHH-HHHHHHHCT-TCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGG
T ss_pred HHHhCCCCcEEecCCCCcHHH-HHHHHhcCC-cceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHH
Confidence 1245789999999998 4444 566666654 68888765542 11 12333
Q ss_pred hhcCCcCCcEEEeecCcccccC-cccccCCCCCCEEeccCccccc-ccChhhhcCcccCeeeeec---------ccCCCC
Q 035895 135 EIGNLTDLISIDLGGNKLNGSI-SITLGKLQKLQFLSFRGNELEG-SIPNVLCHLAVLFQLDLRG---------NKLSGS 203 (527)
Q Consensus 135 ~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~L~L~~---------N~l~~~ 203 (527)
.+..+++|++|++++|.+++.. ...+..+++|+.|++++| +.. .++.....+++|+.|++++ +.++..
T Consensus 284 ~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~ 362 (594)
T 2p1m_B 284 VYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQ 362 (594)
T ss_dssp GHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHH
T ss_pred HHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHH
Confidence 3446789999999999976432 223568899999999988 432 2333445688999998843 455432
Q ss_pred CCcccc-CCccCceeeCCCCCCCCC-chhh-hCCCCccEEEcc--C----Cccccc-----CCccccCCCCCCEEEccCC
Q 035895 204 IPTCFG-NLTALRNLHLDSNELTSI-PSIL-WNLKDILYLDFW--S----NLFVGP-----LPSKIGNLKVLTRIDFSRN 269 (527)
Q Consensus 204 ~p~~~~-~l~~L~~L~L~~N~l~~l-p~~~-~~l~~L~~l~l~--~----n~~~~~-----~p~~~~~l~~L~~L~Ls~N 269 (527)
....+. .+++|+.|.++.|.++.. +..+ ..+++|+.|+++ + +.++.. ++..+..+++|++|++++
T Consensus 363 ~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~- 441 (594)
T 2p1m_B 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG- 441 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-
T ss_pred HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-
Confidence 222332 478899999988888763 2233 357889999998 3 344321 122256788999999977
Q ss_pred CCCCCChhhhhc-CCCCCEEEcccccceeecCCCC-CCCCCCCEEeCCCCcccccCcc-chhhhccCCeeEeeeeee
Q 035895 270 NLLGDIPTTIQG-LKSLQFLSLGHNRLQGSIPNSF-DDLVSLESLDLSNNNLSEIIPL-SLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 270 ~l~~~~p~~~~~-l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~L~~L~~~~~~~ 343 (527)
.+++..+..+.. +++|+.|++++|.+++..+..+ ..+++|+.|++++|.+++.... ....++.|+.|+++.+..
T Consensus 442 ~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 442 LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 666555555655 8899999999999875544444 5678999999999998655443 445688999999887765
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=2.3e-18 Score=157.95 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=49.9
Q ss_pred hhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCC-CchhhhCCCCccEEEccCCcccccCCccccCCCCCC
Q 035895 184 LCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTS-IPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLT 262 (527)
Q Consensus 184 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~ 262 (527)
+..+++|++|++++|++++..|..|+.+++|++|++++|+++. .|..+..+++|++|++++|...+.+| .+..+++|+
T Consensus 84 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~ 162 (197)
T 4ezg_A 84 ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELK 162 (197)
T ss_dssp GTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCC
T ss_pred hhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCC
Confidence 3333344444444444433333334444444444444444433 23333334444444444443222222 355566666
Q ss_pred EEEccCCCCCCCChhhhhcCCCCCEEEcccccce
Q 035895 263 RIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQ 296 (527)
Q Consensus 263 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 296 (527)
+|++++|.+.+ ++ .+..+++|++|++++|++.
T Consensus 163 ~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 163 SLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp EEECTTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred EEECCCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 66666666654 33 5666666777777766654
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.77 E-value=2.8e-18 Score=157.41 Aligned_cols=148 Identities=18% Similarity=0.225 Sum_probs=65.4
Q ss_pred cccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeee
Q 035895 117 SLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLR 196 (527)
Q Consensus 117 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 196 (527)
+|+.|++++|.++. +| .+..+++|++|++++|.++. ...+..+++|+.|++++|.+++..|..|..+++|++|+++
T Consensus 45 ~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVTD-LT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCSC-CT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCccC-hH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 34444444444442 22 34444444444444444331 1234444444444444444444344444444444444444
Q ss_pred cccCCCCCCccccCCccCceeeCCCCC-CCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCC
Q 035895 197 GNKLSGSIPTCFGNLTALRNLHLDSNE-LTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNL 271 (527)
Q Consensus 197 ~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l 271 (527)
+|++++..|..++.+++|++|++++|. ++.+| .+..+++|+.|++++|.+.+. + .+..+++|++|++++|++
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC--
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCccc
Confidence 444444444444444444444444444 44443 344444444444444444331 1 344444444444444444
No 374
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=2.8e-18 Score=170.58 Aligned_cols=101 Identities=12% Similarity=0.049 Sum_probs=60.9
Q ss_pred CCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCC-EEEcccccceeecCCCCCCCCCCCEE
Q 035895 234 LKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQ-FLSLGHNRLQGSIPNSFDDLVSLESL 312 (527)
Q Consensus 234 l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L 312 (527)
+++|+.+++++|.+....+..|.++++|+.++|++| +..+.+.+|.++.+|+ .+++.+ +++...+..|.++++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 344444444444444444455666666666666665 5545555666666666 666666 5555556666666666666
Q ss_pred eCCCCcccccCccchhhhccCCee
Q 035895 313 DLSNNNLSEIIPLSLEKLLYLNIL 336 (527)
Q Consensus 313 ~ls~N~l~~~~p~~~~~l~~L~~L 336 (527)
++++|.++.+.+..|.++..|+.+
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEE
T ss_pred EeCCCccCccchhhhcCCcchhhh
Confidence 666666666666666666666654
No 375
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=8.5e-18 Score=167.06 Aligned_cols=238 Identities=17% Similarity=0.120 Sum_probs=127.1
Q ss_pred CCCCCEEEcccCCCC--cccChhHhhccccccEEEcccCccccccchhhcC--------CcCCcEEEeecCcccccCccc
Q 035895 90 CKYLKKLDISRNPLD--GFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGN--------LTDLISIDLGGNKLNGSISIT 159 (527)
Q Consensus 90 l~~L~~L~Ls~N~l~--~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~--------l~~L~~L~L~~N~l~~~~~~~ 159 (527)
+++|++|||++|++. ...+..+ +.++.+.+..|. +.+.+|.+ +++|++|+|.+ .++.+.+.+
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~----~~~~~~~~~~~~---I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~a 119 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTY----PNGKFYIYMANF---VPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAA 119 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSS----GGGCCEEECTTE---ECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTT
T ss_pred hccCeEEecCcceeEEecCccccc----cccccccccccc---cCHHHhcccccccccccCCCcEEECCc-cccchhHHH
Confidence 677888888888887 2222111 123455555553 34566666 88888888887 777777777
Q ss_pred ccCCCCCCEEeccCcccccccChhhhcCcccCeeeeeccc----CCCCCCccccCCccCc-eeeCCCCCCCCCchhhh--
Q 035895 160 LGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNK----LSGSIPTCFGNLTALR-NLHLDSNELTSIPSILW-- 232 (527)
Q Consensus 160 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~----l~~~~p~~~~~l~~L~-~L~L~~N~l~~lp~~~~-- 232 (527)
|.++++|+.+++++|.+....+.+|.++..+..+.+..+. .....+.+|.++..|+ .+.+.. ...+|..++
T Consensus 120 F~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~--~~~l~~~~~~~ 197 (329)
T 3sb4_A 120 FKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGA--MGKLEDEIMKA 197 (329)
T ss_dssp TTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECT--TCCHHHHHHHT
T ss_pred hhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecC--CCcHHHHHhhc
Confidence 8888888888888887776667777777666666555421 1222333444444433 222221 112222221
Q ss_pred --CCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCC
Q 035895 233 --NLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLE 310 (527)
Q Consensus 233 --~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 310 (527)
...++..+.+.++-...........+++|+.++|++|++....+.+|.++.+|+.+++.+| ++...+..|.++++|+
T Consensus 198 ~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~ 276 (329)
T 3sb4_A 198 GLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLA 276 (329)
T ss_dssp TCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred ccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhcc
Confidence 1223333333222110000000012455555666555555444455555555666665555 5445555555555565
Q ss_pred -EEeCCCCcccccCccchhhhccCCeeEee
Q 035895 311 -SLDLSNNNLSEIIPLSLEKLLYLNILLIV 339 (527)
Q Consensus 311 -~L~ls~N~l~~~~p~~~~~l~~L~~L~~~ 339 (527)
.+++.+ .++.+.+..|..+..|+.+.+.
T Consensus 277 ~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~ 305 (329)
T 3sb4_A 277 GTLELPA-SVTAIEFGAFMGCDNLRYVLAT 305 (329)
T ss_dssp EEEEECT-TCCEECTTTTTTCTTEEEEEEC
T ss_pred EEEEEcc-cceEEchhhhhCCccCCEEEeC
Confidence 555555 4555555555555555555543
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=6.8e-18 Score=154.11 Aligned_cols=129 Identities=23% Similarity=0.349 Sum_probs=91.8
Q ss_pred CEEEcccCCCCcccChhHhhccccccEEEcccCccccccch-hhcCCcCCcEEEeecCcccccCcccccCCCCCCEEecc
Q 035895 94 KKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISE-EIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFR 172 (527)
Q Consensus 94 ~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 172 (527)
+.+++++|.++. +|..+ ..+++.|++++|.+++..+. .|..+++|++|+|++|++++..|..|..+++|+.|+++
T Consensus 11 ~~l~~s~~~l~~-ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDI---PLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCSS-CCSCC---CTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcCc-CccCC---CCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 556666666654 34322 22566666666666655553 36777777777777777777777777777777777777
Q ss_pred CcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCC
Q 035895 173 GNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTS 226 (527)
Q Consensus 173 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 226 (527)
+|++++..|..|.++++|++|+|++|+|++..|..|..+++|++|++++|.++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 777777777777777788888888888877777778888888888888888775
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.71 E-value=4.6e-17 Score=148.59 Aligned_cols=131 Identities=26% Similarity=0.340 Sum_probs=97.1
Q ss_pred CeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchh--hhCCCCccEEEccCCcccccCCccccCCCCCCEEEccC
Q 035895 191 FQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSI--LWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSR 268 (527)
Q Consensus 191 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~--~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~ 268 (527)
+.+++++|.++ .+|..+.. +|++|++++|+++.++.. +..+++|++|++++|.+.+..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 44555555554 23333322 555666666666555432 45556666666666666666677888899999999999
Q ss_pred CCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCc
Q 035895 269 NNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 324 (527)
Q Consensus 269 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 324 (527)
|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|++++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 99998888889999999999999999999999999999999999999999987644
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.71 E-value=1.6e-17 Score=148.23 Aligned_cols=135 Identities=22% Similarity=0.318 Sum_probs=69.3
Q ss_pred CCCCEEEcccCCCC-cccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEE
Q 035895 91 KYLKKLDISRNPLD-GFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFL 169 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~-~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 169 (527)
++|++|++++|.++ +.+|..+..+. +|++|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|+.|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFV-NLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGG-GCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCC-CCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 45556666666555 33444444332 455555555555543 445555555555555555554444444445555555
Q ss_pred eccCccccccc-ChhhhcCcccCeeeeecccCCCCCC---ccccCCccCceeeCCCCCCCCCc
Q 035895 170 SFRGNELEGSI-PNVLCHLAVLFQLDLRGNKLSGSIP---TCFGNLTALRNLHLDSNELTSIP 228 (527)
Q Consensus 170 ~l~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~lp 228 (527)
++++|.+++.. +..+..+++|+.|++++|.+++..+ ..|..+++|++|++++|.+.++|
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~ 163 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEAP 163 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBCC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhcc
Confidence 55555554321 1445555555555555555554333 34555555555555555555544
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.70 E-value=1e-16 Score=142.86 Aligned_cols=133 Identities=23% Similarity=0.272 Sum_probs=78.9
Q ss_pred cCCcEEEeecCccc-ccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceee
Q 035895 140 TDLISIDLGGNKLN-GSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLH 218 (527)
Q Consensus 140 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 218 (527)
++|++|++++|+++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 45666666666665 34455555566666666666665543 4455555555566665555554555555555555555
Q ss_pred CCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCCh---hhhhcCCCCCEEEcccccc
Q 035895 219 LDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP---TTIQGLKSLQFLSLGHNRL 295 (527)
Q Consensus 219 L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~~N~l 295 (527)
+++|+++.+|. +..+..+++|++|++++|.+++..+ ..|..+++|++|++++|.+
T Consensus 102 Ls~N~l~~~~~----------------------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 102 LSGNKLKDIST----------------------LEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp CBSSSCCSSGG----------------------GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred ccCCccCcchh----------------------HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCCh
Confidence 55555555431 1345566667777777777765444 4667777777777777776
Q ss_pred e
Q 035895 296 Q 296 (527)
Q Consensus 296 ~ 296 (527)
.
T Consensus 160 ~ 160 (168)
T 2ell_A 160 Q 160 (168)
T ss_dssp C
T ss_pred h
Confidence 5
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.69 E-value=2.2e-16 Score=144.07 Aligned_cols=128 Identities=28% Similarity=0.334 Sum_probs=101.4
Q ss_pred CeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCC
Q 035895 191 FQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNN 270 (527)
Q Consensus 191 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~ 270 (527)
+.+++++|.++. +|..+. ++|++|++++|+++.+|..+.++++|+.|++++|.+.+..+..|..+++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 456666666653 333332 46677777777777777666677777777777777776677788899999999999999
Q ss_pred CCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccc
Q 035895 271 LLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSE 321 (527)
Q Consensus 271 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 321 (527)
+++..|..|.++++|++|+|++|+++...+..|..+++|+.|++++|++..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 998888899999999999999999997777789999999999999999865
No 381
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.67 E-value=3.1e-17 Score=157.04 Aligned_cols=113 Identities=23% Similarity=0.288 Sum_probs=88.3
Q ss_pred ccccceeccCCceEEEEEEc-cCCcE--EEEEEEeecc-------------------------------C----------
Q 035895 387 FSANNLIGRGSFGSVYKARL-QDGME--FAIKVFHFSC-------------------------------S---------- 422 (527)
Q Consensus 387 ~~~~~~lg~G~~g~vy~~~~-~~~~~--vavK~~~~~~-------------------------------~---------- 422 (527)
|++.+.||+|+||.||+|.. .+|+. ||||+++... .
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67789999999999999998 78888 9999853210 0
Q ss_pred c----------cceeEEEEEeccC-C----cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCe
Q 035895 423 N----------EDFRALVLEYTTN-G----SLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNK 487 (527)
Q Consensus 423 ~----------~~~~~lv~ey~~~-g----~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~ni 487 (527)
+ .+..++||||+.+ | +|.++... .++.....++.|++.|++|+|. +.+||||||||+||
T Consensus 129 ~~~i~~p~~~~~~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlkp~NI 202 (258)
T 1zth_A 129 EAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLSEYNI 202 (258)
T ss_dssp HTTCCCCCEEEEETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCSTTSE
T ss_pred hCCCCCCeEEEcCCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCCHHHE
Confidence 0 0123599999953 4 78776532 1233456789999999999993 56899999999999
Q ss_pred eeCCCCcEEEeecccccccC
Q 035895 488 LLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 488 ll~~~~~~kl~Dfg~a~~~~ 507 (527)
|+++ .++|+|||+|....
T Consensus 203 Ll~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 203 MYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp EESS--SEEECCCTTCEETT
T ss_pred EEcC--cEEEEECcccccCC
Confidence 9998 99999999998764
No 382
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.67 E-value=1.8e-15 Score=153.84 Aligned_cols=258 Identities=11% Similarity=0.055 Sum_probs=141.8
Q ss_pred hhcchhcccCCCceeecCchhhhcCCCCCEEEccccccccccccccceEEcccccccCCCCCCcccccCCCCCCCCEEEc
Q 035895 19 VCYRICTIDSQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSSIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDI 98 (527)
Q Consensus 19 ~~~~~~~~~s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~L 98 (527)
.|..+..+.=-|.++.+.+.+|.+. +|+.+++..| ++.+... +|.++ +|+.+++
T Consensus 111 ~~~~l~~i~ip~~i~~I~~~aF~~~-~L~~i~l~~~-------------------i~~I~~~-----aF~~~-~L~~i~l 164 (401)
T 4fdw_A 111 ILKGYNEIILPNSVKSIPKDAFRNS-QIAKVVLNEG-------------------LKSIGDM-----AFFNS-TVQEIVF 164 (401)
T ss_dssp ECSSCSEEECCTTCCEECTTTTTTC-CCSEEECCTT-------------------CCEECTT-----TTTTC-CCCEEEC
T ss_pred ecCCccEEEECCccCEehHhhcccC-CccEEEeCCC-------------------ccEECHH-----hcCCC-CceEEEe
Confidence 3333444443445556666666653 5666665544 2222221 34443 4666666
Q ss_pred ccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCccccc
Q 035895 99 SRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEG 178 (527)
Q Consensus 99 s~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 178 (527)
.. .++.+.+..|.++. +|+.+++++|.++.+...+|. ..+|+.+.+..+ ++.+...+|.++++|+.+++..| ++.
T Consensus 165 p~-~l~~I~~~aF~~c~-~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~ 239 (401)
T 4fdw_A 165 PS-TLEQLKEDIFYYCY-NLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VST 239 (401)
T ss_dssp CT-TCCEECSSTTTTCT-TCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCE
T ss_pred CC-CccEehHHHhhCcc-cCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccC
Confidence 54 45544445555443 566666666666655555555 356666666533 55555666666666666666654 443
Q ss_pred ccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCC
Q 035895 179 SIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNL 258 (527)
Q Consensus 179 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l 258 (527)
.-..+|.+ .+|+.+.+. +.++.+.+.+|.++++|+.+++.+|.+..- ......+..|.++
T Consensus 240 I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~------------------~~~~I~~~aF~~c 299 (401)
T 4fdw_A 240 IGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDD------------------PEAMIHPYCLEGC 299 (401)
T ss_dssp ECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCC------------------TTCEECTTTTTTC
T ss_pred cccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCC------------------cccEECHHHhhCC
Confidence 44555666 567777773 445555666777777777777766665411 0111223445555
Q ss_pred CCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhh
Q 035895 259 KVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKL 330 (527)
Q Consensus 259 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l 330 (527)
++|+.++|. +.+......+|.++.+|+.+.+..| ++...+..|.++ +|+.+++++|.+..+.+..|..+
T Consensus 300 ~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~ 368 (401)
T 4fdw_A 300 PKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGF 368 (401)
T ss_dssp TTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCS
T ss_pred ccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCC
Confidence 566666665 3344444455666666666666433 444555566666 66666666666655555555554
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=1.7e-16 Score=138.42 Aligned_cols=128 Identities=21% Similarity=0.277 Sum_probs=65.4
Q ss_pred cCCcEEEeecCccc-ccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceee
Q 035895 140 TDLISIDLGGNKLN-GSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLH 218 (527)
Q Consensus 140 ~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 218 (527)
++|++|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555554 34444445555555555555555433 3444444455555555544444444444444444444
Q ss_pred CCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCCh---hhhhcCCCCCEEEcc
Q 035895 219 LDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP---TTIQGLKSLQFLSLG 291 (527)
Q Consensus 219 L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L~ 291 (527)
+++|+++++| .+..++.+++|++|++++|.+++..+ ..+..+++|++|+++
T Consensus 95 ls~N~i~~~~----------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLS----------------------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHH----------------------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChH----------------------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 4444444432 12345555666666666666655444 356666666666654
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.66 E-value=1.1e-16 Score=139.72 Aligned_cols=126 Identities=21% Similarity=0.289 Sum_probs=110.5
Q ss_pred ccccEEEcccCccc-cccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeee
Q 035895 116 QSLEFIWMSDCNIS-GGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLD 194 (527)
Q Consensus 116 ~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 194 (527)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..++.+++|+.|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 57999999999998 67888889999999999999999976 7789999999999999999987898898999999999
Q ss_pred eecccCCCC-CCccccCCccCceeeCCCCCCCCCch----hhhCCCCccEEEcc
Q 035895 195 LRGNKLSGS-IPTCFGNLTALRNLHLDSNELTSIPS----ILWNLKDILYLDFW 243 (527)
Q Consensus 195 L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~lp~----~~~~l~~L~~l~l~ 243 (527)
+++|++++. .+..+..+++|++|++++|.++++|. .+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 999999974 34789999999999999999998775 45556666666543
No 385
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.66 E-value=2.5e-15 Score=152.83 Aligned_cols=242 Identities=9% Similarity=0.021 Sum_probs=188.7
Q ss_pred CCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCE
Q 035895 89 NCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQF 168 (527)
Q Consensus 89 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 168 (527)
.+..++.+.+.. .++.+....|.+. +|+.+.+..+ ++.+...+|.+. +|+.+.+.. .++.+.+.+|.++++|+.
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~--~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~ 184 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS--QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKK 184 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC--CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCE
T ss_pred ecCCccEEEECC-ccCEehHhhcccC--CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCe
Confidence 346677777764 4665555666652 5888888766 666777778774 688888875 676677778888888888
Q ss_pred EeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCccc
Q 035895 169 LSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFV 248 (527)
Q Consensus 169 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~ 248 (527)
++++.|.++......|. ..+|+.+.+..+ ++.+...+|.++++|+.+++..| ++.++...+.-..|+.+.+ .+.+.
T Consensus 185 l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 185 ADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKL-PNGVT 260 (401)
T ss_dssp EECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEE-ETTCC
T ss_pred eecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEe-CCCcc
Confidence 88888888866666666 578888888754 77677788888889999998874 6777665444478888888 45566
Q ss_pred ccCCccccCCCCCCEEEccCCCCC-----CCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccC
Q 035895 249 GPLPSKIGNLKVLTRIDFSRNNLL-----GDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEII 323 (527)
Q Consensus 249 ~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 323 (527)
..-+.+|.++++|+.+++.+|.+. ...+.+|.++++|+.+.+. +.++......|.++++|+.+.+..| ++.+.
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 666788999999999999988765 3567789999999999999 5588788899999999999999655 88888
Q ss_pred ccchhhhccCCeeEeeeeee
Q 035895 324 PLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 324 p~~~~~l~~L~~L~~~~~~~ 343 (527)
+..|..+ .|+.+.+..+..
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~ 357 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTP 357 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSC
T ss_pred HHhCCCC-CCCEEEEcCCCC
Confidence 8999999 999998876543
No 386
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.65 E-value=4.5e-16 Score=142.07 Aligned_cols=128 Identities=23% Similarity=0.337 Sum_probs=89.8
Q ss_pred CEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccC
Q 035895 94 KKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRG 173 (527)
Q Consensus 94 ~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 173 (527)
+.+++++|.++. +|..+ ..+|+.|+|++|.|+ .+|..|..+++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 13 ~~l~~~~~~l~~-ip~~~---~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~ 87 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGI---PRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSY 87 (193)
T ss_dssp TEEECTTSCCSS-CCSCC---CTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCCCc-CCCCC---CCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCC
Confidence 456666666664 33322 235677777777776 4456677777777777777777776666777777777777777
Q ss_pred cccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCC
Q 035895 174 NELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTS 226 (527)
Q Consensus 174 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 226 (527)
|++++..|..|..+++|+.|+|++|+|+...+..|..+++|+.|++++|.+..
T Consensus 88 N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 88 NRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 77776666677777777777777777776666677777778888887777653
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.65 E-value=7.9e-16 Score=138.36 Aligned_cols=133 Identities=21% Similarity=0.241 Sum_probs=100.8
Q ss_pred CCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEecc
Q 035895 93 LKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFR 172 (527)
Q Consensus 93 L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 172 (527)
.+.+++++|+++.+ |..+ ..+|+.|++++|.+++..+..|..+++|++|++++|++++..+..|..+++|+.|+++
T Consensus 9 ~~~l~~~~~~l~~~-p~~~---~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 84 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI---PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLH 84 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC---CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEEecCCCCccC-CCCC---CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECC
Confidence 45667777777653 3322 2367777777777776666677778888888888888887766677888888888888
Q ss_pred CcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCch
Q 035895 173 GNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229 (527)
Q Consensus 173 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~ 229 (527)
+|++++..+..|..+++|+.|++++|++++..+..|..+++|++|++++|.++..++
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 85 ENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 888887666677888888888888888887777777888888888888888876443
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=3e-15 Score=134.56 Aligned_cols=133 Identities=26% Similarity=0.301 Sum_probs=94.8
Q ss_pred CCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEccCC
Q 035895 166 LQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSN 245 (527)
Q Consensus 166 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n 245 (527)
.+.+++++|+++ .+|..+ .++|+.|++++|++++..+..|..+++|++|++++|+++.+
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~------------------ 67 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSL------------------ 67 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCC------------------
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEe------------------
Confidence 345566666655 233222 24556666666666555555555556666666666555544
Q ss_pred cccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCc
Q 035895 246 LFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 324 (527)
Q Consensus 246 ~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 324 (527)
.+..|..+++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|+.|++++|++.+..|
T Consensus 68 -----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 68 -----PDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp -----CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -----ChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 34556778889999999999988777788999999999999999997777778889999999999999987654
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.62 E-value=3.8e-18 Score=156.64 Aligned_cols=138 Identities=22% Similarity=0.247 Sum_probs=70.7
Q ss_pred hcCCcCCcEEEeecCcccccCcc------cccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCcccc
Q 035895 136 IGNLTDLISIDLGGNKLNGSISI------TLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFG 209 (527)
Q Consensus 136 ~~~l~~L~~L~L~~N~l~~~~~~------~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 209 (527)
+.....++.++++.+.+++..|. .+..+++|+.|++++|.+++ +| .+..+++|+.|++++|+++ .+|..+.
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhh
Confidence 34445566666666666555443 45555555555555555553 34 4555555555555555555 3344444
Q ss_pred CCccCceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCCh-hhhhcCCCCCEE
Q 035895 210 NLTALRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIP-TTIQGLKSLQFL 288 (527)
Q Consensus 210 ~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L 288 (527)
.+++|++|++++|+++++| . +..+++|++|++++|++.+..+ ..+..+++|++|
T Consensus 91 ~~~~L~~L~L~~N~l~~l~-~------------------------~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L 145 (198)
T 1ds9_A 91 VADTLEELWISYNQIASLS-G------------------------IEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDL 145 (198)
T ss_dssp HHHHCSEEEEEEEECCCHH-H------------------------HHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEE
T ss_pred cCCcCCEEECcCCcCCcCC-c------------------------cccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEE
Confidence 4455555555555555443 2 3334445555555555543221 245555555555
Q ss_pred EcccccceeecCC
Q 035895 289 SLGHNRLQGSIPN 301 (527)
Q Consensus 289 ~L~~N~l~~~~p~ 301 (527)
++++|++.+..|.
T Consensus 146 ~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 146 LLAGNPLYNDYKE 158 (198)
T ss_dssp EECSCHHHHHHHT
T ss_pred EecCCcccccccc
Confidence 5555555544433
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.61 E-value=4.2e-16 Score=140.05 Aligned_cols=135 Identities=18% Similarity=0.151 Sum_probs=90.7
Q ss_pred cCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCC
Q 035895 86 SMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQK 165 (527)
Q Consensus 86 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 165 (527)
.+.++++|++|++++|+++.+ |. +....++|+.|++++|.+++. ..+..+++|++|++++|++++..+..+..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 356677888888888888854 43 344444677888888877754 56677777777777777777655555567777
Q ss_pred CCEEeccCcccccccCh--hhhcCcccCeeeeecccCCCCCCc----cccCCccCceeeCCCCCCCC
Q 035895 166 LQFLSFRGNELEGSIPN--VLCHLAVLFQLDLRGNKLSGSIPT----CFGNLTALRNLHLDSNELTS 226 (527)
Q Consensus 166 L~~L~l~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~ 226 (527)
|+.|++++|.++ .+|. .+..+++|+.|++++|.++. .|. .+..+++|+.|++++|.+.+
T Consensus 90 L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 90 LTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 777777777775 3444 56667777777777777763 333 36666677777776666544
No 391
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=2.2e-16 Score=157.43 Aligned_cols=111 Identities=14% Similarity=0.204 Sum_probs=87.7
Q ss_pred CccccceeccCCceEEEEEEccCCcEEEEEEEeeccC-------------------------------------------
Q 035895 386 GFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFSCS------------------------------------------- 422 (527)
Q Consensus 386 ~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~~~------------------------------------------- 422 (527)
-|++.+.||+|+||.||+|..++|+.||||+++....
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3899999999999999999999999999998642100
Q ss_pred cc------ceeEEEEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCC---
Q 035895 423 NE------DFRALVLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNI--- 493 (527)
Q Consensus 423 ~~------~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~--- 493 (527)
.. ...++||||++|++|.++.. .+ ....++.|++.++.|+| +.+||||||||.|||+++++
T Consensus 176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~-----~~--~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~~ 245 (397)
T 4gyi_A 176 PVPEPIAQSRHTIVMSLVDALPMRQVSS-----VP--DPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKDAE 245 (397)
T ss_dssp SCCCEEEEETTEEEEECCSCEEGGGCCC-----CS--CHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEECSS
T ss_pred CCCeeeeccCceEEEEecCCccHhhhcc-----cH--HHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCcc
Confidence 00 01249999999998865431 11 23457899999999999 89999999999999998776
Q ss_pred -------cEEEeeccccccc
Q 035895 494 -------VAHLSDFGIAKLL 506 (527)
Q Consensus 494 -------~~kl~Dfg~a~~~ 506 (527)
.+.|+||+=+...
T Consensus 246 d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 246 DPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CTTSEEEEEEECCCTTCEET
T ss_pred cccccccceEEEEeCCcccC
Confidence 3889999976543
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.60 E-value=8.9e-16 Score=137.91 Aligned_cols=133 Identities=22% Similarity=0.237 Sum_probs=67.4
Q ss_pred cCCcCCcEEEeecCcccccCcccccCCC-CCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCc
Q 035895 137 GNLTDLISIDLGGNKLNGSISITLGKLQ-KLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALR 215 (527)
Q Consensus 137 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 215 (527)
.++.+|++|++++|+++.. +. +..+. +|+.|++++|.+++. ..|..+++|++|++++|+|++..|..|..+++|+
T Consensus 16 ~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 91 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLT 91 (176)
T ss_dssp ECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCC
T ss_pred CCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCC
Confidence 3445555555555555532 22 22222 555555555555533 3455555555555555555544444445555555
Q ss_pred eeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChh----hhhcCCCCCEEEcc
Q 035895 216 NLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPT----TIQGLKSLQFLSLG 291 (527)
Q Consensus 216 ~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~ 291 (527)
+|++++|+++.+|.. ..+..+++|++|++++|.+.. +|. .+..+++|++|+++
T Consensus 92 ~L~L~~N~i~~~~~~----------------------~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~ 148 (176)
T 1a9n_A 92 ELILTNNSLVELGDL----------------------DPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQ 148 (176)
T ss_dssp EEECCSCCCCCGGGG----------------------GGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTE
T ss_pred EEECCCCcCCcchhh----------------------HhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCC
Confidence 666655555555430 123444555555555555542 333 25556666666666
Q ss_pred cccce
Q 035895 292 HNRLQ 296 (527)
Q Consensus 292 ~N~l~ 296 (527)
+|.+.
T Consensus 149 ~n~~~ 153 (176)
T 1a9n_A 149 KVKLK 153 (176)
T ss_dssp ECCHH
T ss_pred cCCHH
Confidence 65543
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.60 E-value=1.5e-17 Score=152.71 Aligned_cols=129 Identities=22% Similarity=0.252 Sum_probs=107.1
Q ss_pred ccccEEEcccCccccccch------hhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcc
Q 035895 116 QSLEFIWMSDCNISGGISE------EIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAV 189 (527)
Q Consensus 116 ~~L~~L~Ls~n~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 189 (527)
..++.++++.+.+++..|. .+..+++|++|++++|++++ +| .+..+++|+.|++++|.++ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 3688888888888887776 89999999999999999997 55 8899999999999999998 67888888999
Q ss_pred cCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCch--hhhCCCCccEEEccCCcccc
Q 035895 190 LFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS--ILWNLKDILYLDFWSNLFVG 249 (527)
Q Consensus 190 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~--~~~~l~~L~~l~l~~n~~~~ 249 (527)
|+.|++++|++++ +| .+..+++|++|++++|+++.+|. .+..+++|++|++++|.+.+
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc
Confidence 9999999999997 44 68999999999999999998764 44445555555554444443
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.54 E-value=2.6e-14 Score=127.55 Aligned_cols=109 Identities=26% Similarity=0.274 Sum_probs=90.7
Q ss_pred CceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccc
Q 035895 214 LRNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHN 293 (527)
Q Consensus 214 L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 293 (527)
.+++++++|.++.+|..+. +.+++|++++|.+.+..|..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 4566777777777765542 56677777777777777788899999999999999999888888999999999999999
Q ss_pred cceeecCCCCCCCCCCCEEeCCCCcccccCc
Q 035895 294 RLQGSIPNSFDDLVSLESLDLSNNNLSEIIP 324 (527)
Q Consensus 294 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 324 (527)
++++..+..|..+++|+.|+|++|+++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9998777889999999999999999976543
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=6.2e-14 Score=125.49 Aligned_cols=107 Identities=24% Similarity=0.228 Sum_probs=88.0
Q ss_pred ceeeCCCCCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEccccc
Q 035895 215 RNLHLDSNELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNR 294 (527)
Q Consensus 215 ~~L~L~~N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 294 (527)
+.+++++|+++.+|..+. +.|+.|++++|.+.+..|..|..+++|++|+|++|++++..+..|.++++|++|+|++|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 566667777766666443 566777777777777777888899999999999999998777778999999999999999
Q ss_pred ceeecCCCCCCCCCCCEEeCCCCcccccC
Q 035895 295 LQGSIPNSFDDLVSLESLDLSNNNLSEII 323 (527)
Q Consensus 295 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 323 (527)
|++..+..|..+++|+.|+|++|++....
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred cceeCHHHhccccCCCEEEeCCCCccccc
Confidence 99777777999999999999999997643
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.51 E-value=5.6e-14 Score=125.33 Aligned_cols=108 Identities=22% Similarity=0.194 Sum_probs=69.4
Q ss_pred ccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeec
Q 035895 118 LEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRG 197 (527)
Q Consensus 118 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 197 (527)
.+.+++++|.++. +|..+ .++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 4455555555553 22222 24566666666666666666666666777777777777655555666777777777777
Q ss_pred ccCCCCCCccccCCccCceeeCCCCCCCCCc
Q 035895 198 NKLSGSIPTCFGNLTALRNLHLDSNELTSIP 228 (527)
Q Consensus 198 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp 228 (527)
|+|++..+..|..+++|++|+|++|.++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 7777666666777777777777777776544
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.50 E-value=7.3e-14 Score=125.05 Aligned_cols=108 Identities=25% Similarity=0.273 Sum_probs=67.4
Q ss_pred cEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecc
Q 035895 119 EFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGN 198 (527)
Q Consensus 119 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 198 (527)
+.+++++|.++. +|..+. ++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 445555555542 232222 45666666666666555666666666666666666666555555666777777777777
Q ss_pred cCCCCCCccccCCccCceeeCCCCCCCCCch
Q 035895 199 KLSGSIPTCFGNLTALRNLHLDSNELTSIPS 229 (527)
Q Consensus 199 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~ 229 (527)
+|++..+..|..+++|++|+|++|.+...+.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 7776666667777777777777777776554
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.36 E-value=1.6e-14 Score=145.51 Aligned_cols=85 Identities=19% Similarity=0.215 Sum_probs=38.5
Q ss_pred ccCceeeCCCCCCCC-----CchhhhCCCCccEEEccCCcccc----cCCccccCCCCCCEEEccCCCCCCC----Chhh
Q 035895 212 TALRNLHLDSNELTS-----IPSILWNLKDILYLDFWSNLFVG----PLPSKIGNLKVLTRIDFSRNNLLGD----IPTT 278 (527)
Q Consensus 212 ~~L~~L~L~~N~l~~-----lp~~~~~l~~L~~l~l~~n~~~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 278 (527)
++|++|+|++|.|+. ++..+...++|++|++++|.+.. .++..+...+.|++|+|++|.++.. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 445555555555543 12222333334444444433321 1123334445566666666665432 2223
Q ss_pred hhcCCCCCEEEcccccce
Q 035895 279 IQGLKSLQFLSLGHNRLQ 296 (527)
Q Consensus 279 ~~~l~~L~~L~L~~N~l~ 296 (527)
+...++|++|+|++|.|+
T Consensus 235 L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 235 AREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHCSSCCEEECTTSSCC
T ss_pred HHhCCCCCEEeccCCCCC
Confidence 344455556666555554
No 399
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.33 E-value=3.6e-11 Score=122.18 Aligned_cols=290 Identities=13% Similarity=0.093 Sum_probs=167.8
Q ss_pred ceeecCchhhhcCCCCCEEEccccccccccc------cccceEEcccccccCCCCCCcccccCCCCCCCCEEEcccCCCC
Q 035895 31 KLVGIVSITIFNLSTLKVFDVDNNYVLGRLS------SIVDELSLSDNYLTSSTPELSFLSSMSNCKYLKKLDISRNPLD 104 (527)
Q Consensus 31 ~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~------~~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 104 (527)
.++.+...+|.++++|+.+.+..+ +...-. ..|+.++|..+ ++.+... +|.++++|+.+.+..+ +.
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~-----aF~~c~~L~~i~~p~~-l~ 129 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRC-----TFSGCYALKSILLPLM-LK 129 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTT-----TTTTCTTCCCCCCCTT-CC
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccch-----hhcccccchhhcccCc-ee
Confidence 577788888888888888888754 221111 23666777644 4444332 4677777777666543 33
Q ss_pred cccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEeccCcccccccChhh
Q 035895 105 GFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVL 184 (527)
Q Consensus 105 ~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~ 184 (527)
.+....|.... +...... ..+..+...+|.++.+|+.+.+..+. ..+....|.++.+|+.+.+..| ++......|
T Consensus 130 ~i~~~aF~~~~--~~~~~~~-~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F 204 (394)
T 4fs7_A 130 SIGVEAFKGCD--FKEITIP-EGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCF 204 (394)
T ss_dssp EECTTTTTTCC--CSEEECC-TTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTT
T ss_pred eecceeeeccc--ccccccC-ccccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhh
Confidence 33333343321 2222211 12222334566666667777665443 3345556666666666666554 333344455
Q ss_pred hcCcccCeeeeecccC---------------------CCCCCccccCCccCceeeCCCCCCCCCchhhhCCCCccEEEcc
Q 035895 185 CHLAVLFQLDLRGNKL---------------------SGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLKDILYLDFW 243 (527)
Q Consensus 185 ~~l~~L~~L~L~~N~l---------------------~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~l~l~ 243 (527)
.++..|+.+.+..+.. +.....+|.++..|+.+.+..+...--...+.....+..+...
T Consensus 205 ~~~~~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~ 284 (394)
T 4fs7_A 205 AECILLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYG 284 (394)
T ss_dssp TTCTTCCBCCCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEEC
T ss_pred ccccccceeecCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccC
Confidence 5655555555544322 2222334555555555555544322112234444555555444
Q ss_pred CCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccC
Q 035895 244 SNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEII 323 (527)
Q Consensus 244 ~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 323 (527)
.+.+ ....|..+.+|+.+.+..+ +...-..+|.++.+|+.+++..+ ++.....+|.++.+|+.+++..| ++.+.
T Consensus 285 ~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~ 358 (394)
T 4fs7_A 285 SVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIG 358 (394)
T ss_dssp SSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEEC
T ss_pred ceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEeh
Confidence 3322 2345667778888888654 55455667888888888888654 66666778888888888888766 77777
Q ss_pred ccchhhhccCCeeEee
Q 035895 324 PLSLEKLLYLNILLIV 339 (527)
Q Consensus 324 p~~~~~l~~L~~L~~~ 339 (527)
...|.++..|+.+.+.
T Consensus 359 ~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 359 ANAFQGCINLKKVELP 374 (394)
T ss_dssp TTTBTTCTTCCEEEEE
T ss_pred HHHhhCCCCCCEEEEC
Confidence 7788888888877654
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.33 E-value=1.4e-13 Score=138.56 Aligned_cols=187 Identities=13% Similarity=0.140 Sum_probs=89.7
Q ss_pred CCCCEEEcccCCCCcccChhHhhc----cccccEEEcccCccccccchhh-cCCcCCcEEEeecCcccccCcccc-----
Q 035895 91 KYLKKLDISRNPLDGFLPRVVGNF----SQSLEFIWMSDCNISGGISEEI-GNLTDLISIDLGGNKLNGSISITL----- 160 (527)
Q Consensus 91 ~~L~~L~Ls~N~l~~~~~~~~~~~----~~~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~~----- 160 (527)
+.|+.|+|++|.++......+... ..+|+.|+|++|.++......+ ..+++|++|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 446666666666654332333222 1246666666666543222222 234456666666666653322222
Q ss_pred cCCCCCCEEeccCccccc----ccChhhhcCcccCeeeeecccCCCC----CCccccCCccCceeeCCCCCCCCCchhhh
Q 035895 161 GKLQKLQFLSFRGNELEG----SIPNVLCHLAVLFQLDLRGNKLSGS----IPTCFGNLTALRNLHLDSNELTSIPSILW 232 (527)
Q Consensus 161 ~~l~~L~~L~l~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~lp~~~~ 232 (527)
...++|+.|+|++|.++. .++..+...++|++|+|++|.|+.. ++..+...++|++|+|++|.|+....
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~--- 228 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAA--- 228 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHH---
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHH---
Confidence 134556666666666543 1233334455566666666655431 12334445556666666665543211
Q ss_pred CCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCC-----CCEEE--cccccce
Q 035895 233 NLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKS-----LQFLS--LGHNRLQ 296 (527)
Q Consensus 233 ~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-----L~~L~--L~~N~l~ 296 (527)
..++..+...+.|++|+|++|.++..-...+..+.. |+.+. +..|.+.
T Consensus 229 ----------------~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~~~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 229 ----------------LALARAAREHPSLELLHLYFNELSSEGRQVLRDLGGAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp ----------------HHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHCC------CEEECCCC----CH
T ss_pred ----------------HHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHHhcCCCccchhhHhhhcCCccC
Confidence 012233344566777777777776544444444321 55555 5555544
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=3.5e-12 Score=127.31 Aligned_cols=102 Identities=21% Similarity=0.243 Sum_probs=56.7
Q ss_pred eeeecc-cCCCCCCccccCCccCceeeCCC-CCCCCCchhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCC
Q 035895 193 LDLRGN-KLSGSIPTCFGNLTALRNLHLDS-NELTSIPSILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNN 270 (527)
Q Consensus 193 L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~lp~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~ 270 (527)
++++++ ++++ +|. +..+++|+.|+|++ |+|+.+| +..|+.+++|++|+|++|+
T Consensus 13 v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~-----------------------~~~~~~l~~L~~L~l~~N~ 67 (347)
T 2ifg_A 13 LRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLE-----------------------LRDLRGLGELRNLTIVKSG 67 (347)
T ss_dssp EECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEEC-----------------------GGGSCSCCCCSEEECCSSC
T ss_pred EEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcC-----------------------hhHhccccCCCEEECCCCc
Confidence 455555 5553 344 55555555555553 5555544 4445555556666666666
Q ss_pred CCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCccc
Q 035895 271 LLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLS 320 (527)
Q Consensus 271 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 320 (527)
+++..|..|.++++|++|+|++|+|++..+..|..++ |+.|+|++|.+.
T Consensus 68 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 68 LRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp CCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred cceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCcc
Confidence 6555555556666666666666666554444454444 666666666554
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.32 E-value=3.5e-12 Score=127.32 Aligned_cols=105 Identities=18% Similarity=0.161 Sum_probs=78.9
Q ss_pred EEEcccC-ccccccchhhcCCcCCcEEEeec-CcccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeec
Q 035895 120 FIWMSDC-NISGGISEEIGNLTDLISIDLGG-NKLNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRG 197 (527)
Q Consensus 120 ~L~Ls~n-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 197 (527)
.++++++ +++. +|. +..+++|++|+|++ |+|++..+..|..+++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3466666 6664 444 77777788888875 788777777788888888888888888877777788888888888888
Q ss_pred ccCCCCCCccccCCccCceeeCCCCCCCCC
Q 035895 198 NKLSGSIPTCFGNLTALRNLHLDSNELTSI 227 (527)
Q Consensus 198 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~l 227 (527)
|+|++.++..|..++ |+.|+|++|.+...
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 888877766776665 88888888887753
No 403
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.24 E-value=1.4e-10 Score=117.88 Aligned_cols=298 Identities=12% Similarity=0.125 Sum_probs=201.9
Q ss_pred hcchhcccCCCceeecCchhhhcCCCCCEEEccccccccccc-------cccceEEcccccccCCC--------------
Q 035895 20 CYRICTIDSQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLS-------SIVDELSLSDNYLTSST-------------- 78 (527)
Q Consensus 20 ~~~~~~~~s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~-------~~l~~L~Ls~N~l~~~~-------------- 78 (527)
|..+..+.=.+.++.+...+|.++++|+.+++..+- . .+. ..++.+.+..+ ++.+.
T Consensus 70 c~~L~~i~lp~~i~~I~~~aF~~c~~L~~i~lp~~l-~-~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~~~~~~~ 146 (394)
T 4fs7_A 70 CRKVTEIKIPSTVREIGEFAFENCSKLEIINIPDSV-K-MIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCDFKEITI 146 (394)
T ss_dssp CTTEEEEECCTTCCEECTTTTTTCTTCCEECCCTTC-C-EECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCCCSEEEC
T ss_pred CCCceEEEeCCCccCcchhHhhCCCCCcEEEeCCCc-e-EccchhhcccccchhhcccCc-eeeecceeeeccccccccc
Confidence 667777764466889999999999999999997662 1 111 01222222211 11100
Q ss_pred -CCCc--ccccCCCCCCCCEEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCccccc
Q 035895 79 -PELS--FLSSMSNCKYLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGS 155 (527)
Q Consensus 79 -~~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 155 (527)
.... -..+|.+|++|+.+.+..+ +..+....|.... +|+.+.+..+ ++.+...+|.++..|+.+.+..+...
T Consensus 147 ~~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~-~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~-- 221 (394)
T 4fs7_A 147 PEGVTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCG-KLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY-- 221 (394)
T ss_dssp CTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT-TCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--
T ss_pred CccccccchhhhcccCCCcEEecCCc-cceeccccccCCC-CceEEEcCCC-ceEeCchhhccccccceeecCCCceE--
Confidence 0000 0135777888888888755 3334445555543 6888877766 55566777788888888877766543
Q ss_pred CcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhCCC
Q 035895 156 ISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWNLK 235 (527)
Q Consensus 156 ~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~ 235 (527)
....+....+|+.+.+..+ ++..-...|.++..|+.+.+..+... ....+|..+..++.+....+.+.. ..+..+.
T Consensus 222 i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~--~~F~~~~ 297 (394)
T 4fs7_A 222 LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPE--KTFYGCS 297 (394)
T ss_dssp ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECT--TTTTTCT
T ss_pred eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeecc--ccccccc
Confidence 2223334567777777543 33344567888999999999887554 677889999999999887765322 3456778
Q ss_pred CccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCC
Q 035895 236 DILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLS 315 (527)
Q Consensus 236 ~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 315 (527)
+|..+.+..+ +...-..+|.++.+|+.++|.. .+...-..+|.++.+|+.+.+..| ++.....+|.++++|+.+++.
T Consensus 298 ~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~-~v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 298 SLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPY-LVEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp TCCEEEECTT-CCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred cccccccccc-cceechhhhcCCCCCCEEEeCC-cccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 8999888654 5555667899999999999975 466566789999999999999877 776778899999999999997
Q ss_pred CCcccccCccchhhhccCC
Q 035895 316 NNNLSEIIPLSLEKLLYLN 334 (527)
Q Consensus 316 ~N~l~~~~p~~~~~l~~L~ 334 (527)
.+ ++. +...|.++..|+
T Consensus 375 ~~-~~~-~~~~F~~c~~L~ 391 (394)
T 4fs7_A 375 KR-LEQ-YRYDFEDTTKFK 391 (394)
T ss_dssp GG-GGG-GGGGBCTTCEEE
T ss_pred CC-CEE-hhheecCCCCCc
Confidence 54 332 345566666554
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.07 E-value=3.1e-09 Score=107.79 Aligned_cols=104 Identities=14% Similarity=0.157 Sum_probs=57.4
Q ss_pred hCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCE
Q 035895 232 WNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLES 311 (527)
Q Consensus 232 ~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 311 (527)
.++..|+.+.+..+. ...-...|.+++.|+.+.+. +.+......+|.++.+|+.+.+..+ ++.....+|.++.+|+.
T Consensus 262 ~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~ 338 (394)
T 4gt6_A 262 DSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLER 338 (394)
T ss_dssp TTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCE
T ss_pred eecccccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCE
Confidence 344555555553332 22334455666666666664 3344344455666666666666543 44455556666666666
Q ss_pred EeCCCCcccccCccchhhhccCCeeEee
Q 035895 312 LDLSNNNLSEIIPLSLEKLLYLNILLIV 339 (527)
Q Consensus 312 L~ls~N~l~~~~p~~~~~l~~L~~L~~~ 339 (527)
+.+..+ ++.+....|.++..|+.+.+.
T Consensus 339 i~ip~s-v~~I~~~aF~~C~~L~~i~~~ 365 (394)
T 4gt6_A 339 IAIPSS-VTKIPESAFSNCTALNNIEYS 365 (394)
T ss_dssp EEECTT-CCBCCGGGGTTCTTCCEEEES
T ss_pred EEECcc-cCEEhHhHhhCCCCCCEEEEC
Confidence 666433 555555666666666665544
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.06 E-value=1.9e-08 Score=101.93 Aligned_cols=244 Identities=15% Similarity=0.160 Sum_probs=142.5
Q ss_pred cCCCCCCCCEEEcccCC---CCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcccccCcccccC
Q 035895 86 SMSNCKYLKKLDISRNP---LDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGSISITLGK 162 (527)
Q Consensus 86 ~~~~l~~L~~L~Ls~N~---l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 162 (527)
+|.+|++|+.+.++.|. ++.+-...|.... .|+.+.+..+ ++.+...+|..+.+|+.+.+..+ +..+....|..
T Consensus 82 AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~-~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~ 158 (394)
T 4gt6_A 82 AFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCS-ELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSY 158 (394)
T ss_dssp TTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCT-TCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT
T ss_pred HhhCCccCceEeecCCCCCeeeEechhhchhcc-cceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccceec
Confidence 56777777777776653 5544444454443 4666555443 44455666777777777777543 33355566777
Q ss_pred CCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCchhhhC---------
Q 035895 163 LQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPSILWN--------- 233 (527)
Q Consensus 163 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~~~~~--------- 233 (527)
+.+|+.+.+..+ ++..-..+|.+ ..|+.+.+..+-. .....+|.++.++.......+....+...+..
T Consensus 159 c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T 4gt6_A 159 CYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYAL 235 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEE
T ss_pred ccccccccccce-eeEeccccccc-cceeEEEECCccc-ccccchhhhccccceecccccccccccceeecccccccccc
Confidence 777777777654 33233444543 4566666655432 24455666666666666655554433322111
Q ss_pred -----CCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCC
Q 035895 234 -----LKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVS 308 (527)
Q Consensus 234 -----l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 308 (527)
...+..+.+. +.+...-..+|..+..|+.+.+..+.. .....+|.++.+|+.+.+. +.++......|.++.+
T Consensus 236 ~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~ 312 (394)
T 4gt6_A 236 IRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCIS 312 (394)
T ss_dssp EECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTT
T ss_pred cccccccccceEEcC-CcceEcccceeeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCC
Confidence 1112222221 222333345677777777777765443 2445667777788877775 4455566677777788
Q ss_pred CCEEeCCCCcccccCccchhhhccCCeeEee
Q 035895 309 LESLDLSNNNLSEIIPLSLEKLLYLNILLIV 339 (527)
Q Consensus 309 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~~ 339 (527)
|+.+++..+ ++.+....|..+..|+.+.+.
T Consensus 313 L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 313 LKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 888887654 666666777777777776653
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.98 E-value=1.2e-07 Score=95.46 Aligned_cols=292 Identities=13% Similarity=0.083 Sum_probs=153.3
Q ss_pred cchhcccCCCceeecCchhhhcCCCCCEEEcccccccccccc------ccceEEcccccccCCCCCCcccccCCCCCCCC
Q 035895 21 YRICTIDSQNKLVGIVSITIFNLSTLKVFDVDNNYVLGRLSS------IVDELSLSDNYLTSSTPELSFLSSMSNCKYLK 94 (527)
Q Consensus 21 ~~~~~~~s~N~l~~~~~~~~~~l~~L~~L~Ls~N~~~~~~~~------~l~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~ 94 (527)
..+..+.=...++.+...+|.++.+|+.+++..+ +. .+.. .+..+.+..+ ++.+... +|.++ +|+
T Consensus 46 ~~i~~v~ip~~vt~Ig~~aF~~C~~L~~I~lp~~-v~-~Ig~~aF~~c~l~~i~~~~~-l~~I~~~-----aF~~~-~L~ 116 (379)
T 4h09_A 46 DRISEVRVNSGITSIGEANFNSCYNMTKVTVAST-VT-SIGDGAFADTKLQSYTGMER-VKKFGDY-----VFQGT-DLD 116 (379)
T ss_dssp GGCSEEEECTTEEEECTTTTTTCTTCCEEEECTT-CC-EECTTTTTTCCCCEEEECTT-CCEECTT-----TTTTC-CCS
T ss_pred cCCEEEEeCCCccChHHHHhhCCCCCCEEEeCCc-ce-EechhhhcCCCCceEECCce-eeEeccc-----eeccC-Ccc
Confidence 3444444345688888999999999999999755 22 1111 2334444322 3333222 35444 677
Q ss_pred EEEcccCCCCcccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCccccc------------CcccccC
Q 035895 95 KLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKLNGS------------ISITLGK 162 (527)
Q Consensus 95 ~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~------------~~~~~~~ 162 (527)
.+++..+ ++......|... +++.+.+..+ ++.+....|..+.+++.+.+..+..... ....+..
T Consensus 117 ~i~lp~~-~~~i~~~~F~~~--~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (379)
T 4h09_A 117 DFEFPGA-TTEIGNYIFYNS--SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPA 192 (379)
T ss_dssp EEECCTT-CCEECTTTTTTC--CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCT
T ss_pred cccCCCc-cccccccccccc--eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccc
Confidence 7777654 333333334332 4555555433 4445556677777777777665443211 1112233
Q ss_pred CCCCCEEeccCcccccccChhhhcCcccCeeeeecccCCCCCCccccCCccCceeeCCCCCCCCCch-hhhCCCCccEEE
Q 035895 163 LQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRGNKLSGSIPTCFGNLTALRNLHLDSNELTSIPS-ILWNLKDILYLD 241 (527)
Q Consensus 163 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~lp~-~~~~l~~L~~l~ 241 (527)
...+..+.+....- ......+.....|+.+.+..+ +......+|.++..|+.+.+..+ ++.+.. .+.++..|..+.
T Consensus 193 ~~~~~~~~~~~~~~-~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 193 AKTGTEFTIPSTVK-TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp TCCCSEEECCTTCC-EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred ccccccccccccee-EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 33444444332221 133345555666666665543 33344556666666766666554 444433 334455555555
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCCCCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccc
Q 035895 242 FWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLKSLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSE 321 (527)
Q Consensus 242 l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 321 (527)
+..+ +.......|.++++|+.+.+..+.+......+|.++.+|+.+.|..+ ++.....+|.++.+|+.+.+..+ ++.
T Consensus 270 l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~ 346 (379)
T 4h09_A 270 FYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-ITL 346 (379)
T ss_dssp ECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CCE
T ss_pred cccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cCE
Confidence 5332 33333445566666666666655555444556666666666666543 44444556666666666666433 444
Q ss_pred cCccchhhhc
Q 035895 322 IIPLSLEKLL 331 (527)
Q Consensus 322 ~~p~~~~~l~ 331 (527)
+-...|.++.
T Consensus 347 I~~~aF~~c~ 356 (379)
T 4h09_A 347 IESGAFEGSS 356 (379)
T ss_dssp ECTTTTTTSS
T ss_pred EchhHhhCCC
Confidence 4444554443
No 407
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.92 E-value=2.7e-09 Score=101.75 Aligned_cols=119 Identities=14% Similarity=0.090 Sum_probs=89.8
Q ss_pred HhhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec------------------------------cCccceeEE
Q 035895 380 LLRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS------------------------------CSNEDFRAL 429 (527)
Q Consensus 380 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~------------------------------~~~~~~~~l 429 (527)
+....++|+.....+.|+++.||++... +..+++|+.... +...+..++
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l 87 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL 87 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred HHHHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence 3455678999999999999999999865 678999997521 112345679
Q ss_pred EEEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC-------------------------------------
Q 035895 430 VLEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG------------------------------------- 472 (527)
Q Consensus 430 v~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~------------------------------------- 472 (527)
||||++|.++.+.+.. ......++.+++++++.||..
T Consensus 88 v~e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 88 LMSEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EEECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEEecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 9999999999876321 112346788999999999951
Q ss_pred -------------------CCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 473 -------------------YSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 473 -------------------~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
....++|+|++|.||+++++..+.|.||+.+..
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 014589999999999998766667999998764
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.87 E-value=4.2e-10 Score=112.30 Aligned_cols=64 Identities=14% Similarity=0.199 Sum_probs=31.6
Q ss_pred CCCCCEEEccCCCCCCCChhhhh---cCCCCCEEEcccccceee----cCCCCCCCCCCCEEeCCCCcccc
Q 035895 258 LKVLTRIDFSRNNLLGDIPTTIQ---GLKSLQFLSLGHNRLQGS----IPNSFDDLVSLESLDLSNNNLSE 321 (527)
Q Consensus 258 l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~ 321 (527)
+++|++|+|++|.+.+..+..+. .+++|++|+|+.|.+.+. ++..+..+++|+.|++++|.+++
T Consensus 251 ~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 45555555555555432222222 345566666666655532 22222344566666666665543
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=2.4e-09 Score=106.86 Aligned_cols=63 Identities=22% Similarity=0.314 Sum_probs=40.5
Q ss_pred cCCCCCEEEcccccceeecCCCC---CCCCCCCEEeCCCCccccc----CccchhhhccCCeeEeeeeee
Q 035895 281 GLKSLQFLSLGHNRLQGSIPNSF---DDLVSLESLDLSNNNLSEI----IPLSLEKLLYLNILLIVVVIL 343 (527)
Q Consensus 281 ~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~~~~~~~ 343 (527)
.+++|++|+|.+|.+....+..+ ..+++|++|+|+.|.+++. ++..+..+++|+.|+++.+.+
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 46778888888777753221111 2466788888888887763 344456677788887776654
No 410
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.83 E-value=8.6e-09 Score=97.89 Aligned_cols=117 Identities=15% Similarity=0.050 Sum_probs=82.2
Q ss_pred hhhcCCccccceeccCCceEEEEEEccCCcEEEEEEEeec----------------------------cCccceeEEEEE
Q 035895 381 LRATDGFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS----------------------------CSNEDFRALVLE 432 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~----------------------------~~~~~~~~lv~e 432 (527)
.....+|.+..+.+.|..+.||++...+|..+++|+.... ....+..++|||
T Consensus 16 ~~~~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e 95 (264)
T 1nd4_A 16 VERLFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSGALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLG 95 (264)
T ss_dssp TTTTTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEE
T ss_pred HHhcCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcccchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEE
Confidence 3445667665544566679999998877888999986421 011234589999
Q ss_pred eccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------
Q 035895 433 YTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY--------------------------------------- 473 (527)
Q Consensus 433 y~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~--------------------------------------- 473 (527)
|++|.++. ... .+ ...++.++++.++.+|...
T Consensus 96 ~i~G~~l~--~~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (264)
T 1nd4_A 96 EVPGQDLL--SSH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLA 166 (264)
T ss_dssp CCSSEETT--TSC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCC
T ss_pred ecCCcccC--cCc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCcc
Confidence 99998884 211 12 2346677888888888321
Q ss_pred ----------------CCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 474 ----------------STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 474 ----------------~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
...++|+|++|.||++++++.+.+.|||.+..-
T Consensus 167 ~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 167 PAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 122999999999999987766779999998753
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.71 E-value=7.9e-07 Score=89.41 Aligned_cols=130 Identities=16% Similarity=0.190 Sum_probs=84.3
Q ss_pred CccccCCccCceeeCCCCCCCCCc-hhhhCCCCccEEEccCCcccccCCccccCCCCCCEEEccCCCCCCCChhhhhcCC
Q 035895 205 PTCFGNLTALRNLHLDSNELTSIP-SILWNLKDILYLDFWSNLFVGPLPSKIGNLKVLTRIDFSRNNLLGDIPTTIQGLK 283 (527)
Q Consensus 205 p~~~~~l~~L~~L~L~~N~l~~lp-~~~~~l~~L~~l~l~~n~~~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 283 (527)
..+|....+|+.+.+..+ ++.++ ..+.++..|..+.+..+ +...-...|.++..|+.+.+..+ +.......|.++.
T Consensus 210 ~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~ 286 (379)
T 4h09_A 210 AYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCS 286 (379)
T ss_dssp TTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCT
T ss_pred ecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccccc
Confidence 344555566666666543 33333 34455667777776554 44444566777777777777543 4444456777788
Q ss_pred CCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcccccCccchhhhccCCeeEe
Q 035895 284 SLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNLSEIIPLSLEKLLYLNILLI 338 (527)
Q Consensus 284 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~~ 338 (527)
+|+.+.+.++.++......|.++.+|+.+.+..+ ++.+....|.++..|+.+.+
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 8888888777777666777888888888887644 66666677777777765543
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.49 E-value=2.1e-07 Score=93.00 Aligned_cols=114 Identities=15% Similarity=0.184 Sum_probs=82.9
Q ss_pred cccceeccCCceEEEEEEccCCcEEEEEEEe--ec--------------------------------cCcc---ceeEEE
Q 035895 388 SANNLIGRGSFGSVYKARLQDGMEFAIKVFH--FS--------------------------------CSNE---DFRALV 430 (527)
Q Consensus 388 ~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~--~~--------------------------------~~~~---~~~~lv 430 (527)
...+.++.|.++.||++...+ ..+++|+.. .. +... +..++|
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~v 119 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYI 119 (359)
T ss_dssp CEEEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEE
T ss_pred ceEEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEE
Confidence 346789999999999998765 567787654 10 1111 236899
Q ss_pred EEeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCC-------------------------------------
Q 035895 431 LEYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY------------------------------------- 473 (527)
Q Consensus 431 ~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~------------------------------------- 473 (527)
|||++|..+.+.. -..++..++..++.++++.|+.+|...
T Consensus 120 me~v~G~~l~~~~---~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 120 MEFVSGRVLWDQS---LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp EECCCCBCCCCTT---CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EEecCCeecCCCc---cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9999998774311 123567777888999999999999420
Q ss_pred ------------------CCCeEecCCCCCCeeeCCCCc--EEEeecccccc
Q 035895 474 ------------------STPIIHCDLKPHNKLLDDNIV--AHLSDFGIAKL 505 (527)
Q Consensus 474 ------------------~~~iiHrdlk~~nill~~~~~--~kl~Dfg~a~~ 505 (527)
...+||+|+++.||+++.++. +.|.||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999987653 68999999874
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.47 E-value=6.7e-08 Score=86.89 Aligned_cols=90 Identities=13% Similarity=0.109 Sum_probs=46.0
Q ss_pred CCCCCCCCEEEcccC-CCCcccCh----hHhhccccccEEEcccCccccc----cchhhcCCcCCcEEEeecCccccc--
Q 035895 87 MSNCKYLKKLDISRN-PLDGFLPR----VVGNFSQSLEFIWMSDCNISGG----ISEEIGNLTDLISIDLGGNKLNGS-- 155 (527)
Q Consensus 87 ~~~l~~L~~L~Ls~N-~l~~~~~~----~~~~~~~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~-- 155 (527)
+...+.|++|+|++| .+...-.. .+... ++|++|+|++|.|... +...+...+.|++|+|++|.|+..
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~-~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTN-TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTC-CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhC-CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 455677777777777 77542111 11221 3466666666666421 223334445566666666665532
Q ss_pred --CcccccCCCCCCEEec--cCcccc
Q 035895 156 --ISITLGKLQKLQFLSF--RGNELE 177 (527)
Q Consensus 156 --~~~~~~~l~~L~~L~l--~~N~l~ 177 (527)
+...+...++|+.|+| ++|.+.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~ 136 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLG 136 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCC
Confidence 2233444455555555 455554
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.44 E-value=3.5e-08 Score=93.47 Aligned_cols=60 Identities=27% Similarity=0.334 Sum_probs=26.7
Q ss_pred cccEEEcccCccccc--cchhhcCCcCCcEEEeecCcccccCcccccCCC--CCCEEeccCccccc
Q 035895 117 SLEFIWMSDCNISGG--ISEEIGNLTDLISIDLGGNKLNGSISITLGKLQ--KLQFLSFRGNELEG 178 (527)
Q Consensus 117 ~L~~L~Ls~n~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~--~L~~L~l~~N~l~~ 178 (527)
+|+.|+|++|.|+++ +|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+.+
T Consensus 171 ~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~ 234 (267)
T 3rw6_A 171 ELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCD 234 (267)
T ss_dssp TCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGG
T ss_pred CCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcc
Confidence 455555555555442 233444455555555555555432 1122222 44445555554443
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.42 E-value=1e-07 Score=85.60 Aligned_cols=91 Identities=21% Similarity=0.236 Sum_probs=42.8
Q ss_pred hcCCcCCcEEEeecC-ccccc----CcccccCCCCCCEEeccCcccccc----cChhhhcCcccCeeeeecccCCCC---
Q 035895 136 IGNLTDLISIDLGGN-KLNGS----ISITLGKLQKLQFLSFRGNELEGS----IPNVLCHLAVLFQLDLRGNKLSGS--- 203 (527)
Q Consensus 136 ~~~l~~L~~L~L~~N-~l~~~----~~~~~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~--- 203 (527)
+...+.|++|+|++| .+... +...+...++|++|+|++|.+... +...+...+.|++|+|++|.|...
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~ 111 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGIL 111 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHH
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHH
Confidence 344445555555555 44321 122333445555555555555421 122333344555555555555422
Q ss_pred -CCccccCCccCceeeC--CCCCCCC
Q 035895 204 -IPTCFGNLTALRNLHL--DSNELTS 226 (527)
Q Consensus 204 -~p~~~~~l~~L~~L~L--~~N~l~~ 226 (527)
+...+...++|++|+| ++|.++.
T Consensus 112 ~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 112 ALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHhCCCceEEEecCCCCCCCH
Confidence 2233444555666666 5566553
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.40 E-value=6.8e-08 Score=91.51 Aligned_cols=104 Identities=25% Similarity=0.359 Sum_probs=68.2
Q ss_pred hcCCcCCcE--EEeecCccc---ccCcccccCCCCCCEEeccCccccc--ccChhhhcCcccCeeeeecccCCCCCCccc
Q 035895 136 IGNLTDLIS--IDLGGNKLN---GSISITLGKLQKLQFLSFRGNELEG--SIPNVLCHLAVLFQLDLRGNKLSGSIPTCF 208 (527)
Q Consensus 136 ~~~l~~L~~--L~L~~N~l~---~~~~~~~~~l~~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 208 (527)
|...+.|.. ++++.|+.. +.++.....+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+
T Consensus 137 l~~dp~L~~~~l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l 214 (267)
T 3rw6_A 137 LRSDPDLVAQNIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--REL 214 (267)
T ss_dssp GGGCHHHHHTTCCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGG
T ss_pred cCCCcchhhcCccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhh
Confidence 444445554 666777433 2223333467788888888888876 4456677888888888888888764 234
Q ss_pred cCCc--cCceeeCCCCCCCC-Cc-------hhhhCCCCccEEE
Q 035895 209 GNLT--ALRNLHLDSNELTS-IP-------SILWNLKDILYLD 241 (527)
Q Consensus 209 ~~l~--~L~~L~L~~N~l~~-lp-------~~~~~l~~L~~l~ 241 (527)
..+. +|++|+|++|.+.+ +| ..+..+++|+.||
T Consensus 215 ~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 215 DKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp GGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred hhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 4444 78888888888875 44 2355677888776
No 417
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=97.91 E-value=2.4e-05 Score=76.62 Aligned_cols=114 Identities=17% Similarity=0.216 Sum_probs=80.0
Q ss_pred CccccceeccCCceEEEEEEccCCcEEEEEEEeec---------------cCc------------cceeEEEEEeccCCc
Q 035895 386 GFSANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS---------------CSN------------EDFRALVLEYTTNGS 438 (527)
Q Consensus 386 ~~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~---------------~~~------------~~~~~lv~ey~~~g~ 438 (527)
.....+.++.|..+.||++ +..+++|+.... ... .+..++||||++|.+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~~~~~lvme~i~G~~ 113 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDSVRISQKRELELYRFLENCKLSYQIPAVVYQSDRFNIMKYIKGER 113 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEECSSCEEEECCCCBC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHHHHHHHHHHHHHHHHHHhcCCCCCcceEEecCCcEEEEeecCCcc
Confidence 4555678999999999998 667888875321 000 033569999999988
Q ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------------
Q 035895 439 LEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGY--------------------------------------------- 473 (527)
Q Consensus 439 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~--------------------------------------------- 473 (527)
+..... ..++..++..++.++++.++.+|...
T Consensus 114 l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (320)
T 3r70_A 114 ITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIE 190 (320)
T ss_dssp CCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred cccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHH
Confidence 864321 12355555666777777777777221
Q ss_pred ---------------CCCeEecCCCCCCeeeCCCCcEEEeeccccccc
Q 035895 474 ---------------STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLL 506 (527)
Q Consensus 474 ---------------~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~ 506 (527)
...++|+|++|.||+++++..+.+.||+.+..-
T Consensus 191 ~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 191 TIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 234599999999999998766799999998653
No 418
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=97.85 E-value=2.7e-05 Score=75.55 Aligned_cols=110 Identities=22% Similarity=0.240 Sum_probs=77.0
Q ss_pred cceeccCCceEEEEEEccCCcEEEEEEEeec------------------------------cCcc---ceeEEEEEeccC
Q 035895 390 NNLIGRGSFGSVYKARLQDGMEFAIKVFHFS------------------------------CSNE---DFRALVLEYTTN 436 (527)
Q Consensus 390 ~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~------------------------------~~~~---~~~~lv~ey~~~ 436 (527)
.+.++.|.+..||++. ..+++|+.... .... ...++||||++|
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G 100 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKG 100 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCC
Confidence 4568999999999864 46788874210 0011 134789999999
Q ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 035895 437 GSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFG-------------------------------------------- 472 (527)
Q Consensus 437 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~-------------------------------------------- 472 (527)
.++...... .++..++..++.++++.++.+|..
T Consensus 101 ~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (304)
T 3sg8_A 101 VPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFY 177 (304)
T ss_dssp EECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHH
T ss_pred eECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHH
Confidence 888653321 245556667777777777777731
Q ss_pred -----------CCCCeEecCCCCCCeeeCC--CCcEEEeeccccccc
Q 035895 473 -----------YSTPIIHCDLKPHNKLLDD--NIVAHLSDFGIAKLL 506 (527)
Q Consensus 473 -----------~~~~iiHrdlk~~nill~~--~~~~kl~Dfg~a~~~ 506 (527)
....++|+|++|.||++++ ...+.+.||+.+..-
T Consensus 178 ~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 178 RDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 1245899999999999997 456789999998753
No 419
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.71 E-value=1.8e-05 Score=69.58 Aligned_cols=83 Identities=12% Similarity=0.127 Sum_probs=38.7
Q ss_pred CCcEEEeecCcccccCcccccCCCCCCEEeccCcc-cccccChhhhcC----cccCeeeeeccc-CCCCCCccccCCccC
Q 035895 141 DLISIDLGGNKLNGSISITLGKLQKLQFLSFRGNE-LEGSIPNVLCHL----AVLFQLDLRGNK-LSGSIPTCFGNLTAL 214 (527)
Q Consensus 141 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~L 214 (527)
.|++||++++.|+..--..+.++++|+.|+|++|. ++..--..+..+ ++|++|+|++|. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 34444444444443222334455555555555553 332212223332 246666666653 443222234556666
Q ss_pred ceeeCCCCC
Q 035895 215 RNLHLDSNE 223 (527)
Q Consensus 215 ~~L~L~~N~ 223 (527)
+.|+++++.
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 666666653
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.64 E-value=0.00021 Score=69.27 Aligned_cols=33 Identities=30% Similarity=0.433 Sum_probs=26.9
Q ss_pred CCCeEecCCCCCCeeeCC---CCc-EEEeeccccccc
Q 035895 474 STPIIHCDLKPHNKLLDD---NIV-AHLSDFGIAKLL 506 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~---~~~-~kl~Dfg~a~~~ 506 (527)
...++|+|++|.||+++. ++. +.|.||+.+..-
T Consensus 189 ~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 189 TPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp CCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred CCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 456799999999999987 455 479999988753
No 421
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.63 E-value=3e-05 Score=68.11 Aligned_cols=82 Identities=16% Similarity=0.281 Sum_probs=35.3
Q ss_pred CCCEEEcccCCCCcccChhHhhccccccEEEcccCc-cccccchhhcCC----cCCcEEEeecCc-ccccCcccccCCCC
Q 035895 92 YLKKLDISRNPLDGFLPRVVGNFSQSLEFIWMSDCN-ISGGISEEIGNL----TDLISIDLGGNK-LNGSISITLGKLQK 165 (527)
Q Consensus 92 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~n~-l~~~~~~~~~~l----~~L~~L~L~~N~-l~~~~~~~~~~l~~ 165 (527)
.|+.||++++.++..--..+..+ ++|+.|+|++|. |+..--..+..+ ++|++|+|++|. |+..--..+..+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~-~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGL-QYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTC-SCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred eEeEEeCcCCCccHHHHHHhcCC-CCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 46666666666554322233333 245555555553 332222223322 235555555542 44222223334444
Q ss_pred CCEEeccCc
Q 035895 166 LQFLSFRGN 174 (527)
Q Consensus 166 L~~L~l~~N 174 (527)
|+.|+++++
T Consensus 141 L~~L~L~~c 149 (176)
T 3e4g_A 141 LKYLFLSDL 149 (176)
T ss_dssp CCEEEEESC
T ss_pred CCEEECCCC
Confidence 555554444
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.56 E-value=0.00055 Score=64.83 Aligned_cols=119 Identities=18% Similarity=0.104 Sum_probs=74.9
Q ss_pred hhhcCCccccceeccCCce-EEEEEEcc-CCcEEEEEEEee---------------------------ccCccceeEEEE
Q 035895 381 LRATDGFSANNLIGRGSFG-SVYKARLQ-DGMEFAIKVFHF---------------------------SCSNEDFRALVL 431 (527)
Q Consensus 381 ~~~~~~~~~~~~lg~G~~g-~vy~~~~~-~~~~vavK~~~~---------------------------~~~~~~~~~lv~ 431 (527)
.....+|+. +.+..|..| .||+.... ++..+.+|+-.. .+...+..++||
T Consensus 21 ~~~l~g~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvm 99 (272)
T 4gkh_A 21 DADLYGYRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKGSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLT 99 (272)
T ss_dssp HHHHTTCEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred hccccCCeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCCCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEE
Confidence 334556654 355666666 68988764 456788997431 223456778999
Q ss_pred EeccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 035895 432 EYTTNGSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHF---------------------------------------- 471 (527)
Q Consensus 432 ey~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~---------------------------------------- 471 (527)
|+++|.++.+...... .....++.++++.++-||.
T Consensus 100 e~l~G~~~~~~~~~~~-----~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (272)
T 4gkh_A 100 TAIPGKTAFQVLEEYP-----DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGW 174 (272)
T ss_dssp ECCCSEEHHHHHHHCG-----GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTC
T ss_pred EeeCCccccccccCCH-----HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccch
Confidence 9999988776542210 0112233333333333331
Q ss_pred ---------------CCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 472 ---------------GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 472 ---------------~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
.....++|+|+.+.||++++++.+-|.||+.+..
T Consensus 175 ~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 175 PVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 1122379999999999999877777999998865
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.46 E-value=0.00034 Score=69.54 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=27.5
Q ss_pred CCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 475 TPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 475 ~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
+.++|+|+++.||++++++.+.|.||+.+..
T Consensus 213 ~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 213 RHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp CEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred cEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 5689999999999998777788999998865
No 424
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.27 E-value=0.00064 Score=66.68 Aligned_cols=32 Identities=25% Similarity=0.315 Sum_probs=28.8
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
...+||+|+++.||+++.++.+.+.||+.+..
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 57899999999999998888999999998754
No 425
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.19 E-value=0.0012 Score=63.40 Aligned_cols=30 Identities=23% Similarity=0.342 Sum_probs=26.7
Q ss_pred cccceeccCCceEEEEEEccCCcEEEEEEE
Q 035895 388 SANNLIGRGSFGSVYKARLQDGMEFAIKVF 417 (527)
Q Consensus 388 ~~~~~lg~G~~g~vy~~~~~~~~~vavK~~ 417 (527)
...+.||.|.++.||+++..+|+.+++|+.
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~ 47 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKAL 47 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEEC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEec
Confidence 446789999999999999888999999985
No 426
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.97 E-value=0.00049 Score=61.51 Aligned_cols=63 Identities=22% Similarity=0.224 Sum_probs=27.9
Q ss_pred CCCCCEEEcccC-CCCcc----cChhHhhccccccEEEcccCccccc----cchhhcCCcCCcEEEeecCccc
Q 035895 90 CKYLKKLDISRN-PLDGF----LPRVVGNFSQSLEFIWMSDCNISGG----ISEEIGNLTDLISIDLGGNKLN 153 (527)
Q Consensus 90 l~~L~~L~Ls~N-~l~~~----~~~~~~~~~~~L~~L~Ls~n~l~~~----~~~~~~~l~~L~~L~L~~N~l~ 153 (527)
-+.|++|+|++| .|... +-+.+.. ...|+.|+|++|.|... +.+.+..-+.|++|+|+.|.|.
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~-N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACN-SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTT-CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhh-CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 345666666664 55421 1111111 12455555555555421 1222333344555555555554
No 427
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=96.97 E-value=0.0015 Score=64.54 Aligned_cols=32 Identities=19% Similarity=0.218 Sum_probs=26.8
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
...+||+|+.+.||+++++..+.|.||+.+..
T Consensus 221 ~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 221 EPVLLWGDARVGNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp CCEEECSSCSGGGEEEETTEEEEECCGGGCEE
T ss_pred CceEEeCCCCCCeEEEeCCcEEEEEccccccc
Confidence 46789999999999999654578999998764
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=96.80 E-value=0.003 Score=63.46 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=26.6
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
...++|+|+.|.||+++.+ .+++.||..+..
T Consensus 226 ~~~L~HGDl~~~Nil~~~~-~~~lID~e~a~~ 256 (397)
T 2olc_A 226 AETLIHGDLHTGSIFASEH-ETKVIDPEFAFY 256 (397)
T ss_dssp CCEEECSCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred CCceeeCCCCcCcEEEeCC-CeEEEeCccccc
Confidence 5678999999999999866 489999987764
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.78 E-value=0.0021 Score=53.53 Aligned_cols=36 Identities=28% Similarity=0.286 Sum_probs=19.1
Q ss_pred CCCEEEcccccceeecCCCCCCCCCCCEEeCCCCcc
Q 035895 284 SLQFLSLGHNRLQGSIPNSFDDLVSLESLDLSNNNL 319 (527)
Q Consensus 284 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 319 (527)
+|++|+|++|+|+...++.|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 345555555555544444555555555555555554
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.73 E-value=0.00054 Score=61.24 Aligned_cols=61 Identities=16% Similarity=0.189 Sum_probs=31.4
Q ss_pred cccEEEcccC-cccc----ccchhhcCCcCCcEEEeecCcccccC----cccccCCCCCCEEeccCcccc
Q 035895 117 SLEFIWMSDC-NISG----GISEEIGNLTDLISIDLGGNKLNGSI----SITLGKLQKLQFLSFRGNELE 177 (527)
Q Consensus 117 ~L~~L~Ls~n-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~l~~N~l~ 177 (527)
.|+.|+|++| .|.. .+.+++..-..|++|+|++|.|...- ...+..-+.|+.|+|+.|.|.
T Consensus 42 ~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 42 DLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp SCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred CccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 5666777664 5542 12334444555666666666665321 122233455666666666554
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.65 E-value=0.0023 Score=53.28 Aligned_cols=55 Identities=22% Similarity=0.276 Sum_probs=29.6
Q ss_pred EEEcccCCCC-cccChhHhhccccccEEEcccCccccccchhhcCCcCCcEEEeecCcc
Q 035895 95 KLDISRNPLD-GFLPRVVGNFSQSLEFIWMSDCNISGGISEEIGNLTDLISIDLGGNKL 152 (527)
Q Consensus 95 ~L~Ls~N~l~-~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 152 (527)
.+|.+++.++ ..+|.. ++.+|+.|+|++|+|+.+.+..|..+++|++|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~---lp~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTA---FPVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSC---CCTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCC---CCcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 113322 233466666666666655555556666666666666654
No 432
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.07 E-value=0.013 Score=55.84 Aligned_cols=31 Identities=23% Similarity=0.332 Sum_probs=27.5
Q ss_pred ccccceeccCCceEEEEEEccCCcEEEEEEE
Q 035895 387 FSANNLIGRGSFGSVYKARLQDGMEFAIKVF 417 (527)
Q Consensus 387 ~~~~~~lg~G~~g~vy~~~~~~~~~vavK~~ 417 (527)
....+.+|.|..+.||+.+..+|+.|.+|+.
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~ 47 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKAL 47 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEe
Confidence 4556789999999999999999999999984
No 433
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=95.86 E-value=0.021 Score=55.11 Aligned_cols=111 Identities=13% Similarity=0.068 Sum_probs=68.1
Q ss_pred ccceeccCCceEEEEEEccCCcEEEEEEEeec-----------------------------cCccceeEEEEEeccCCcH
Q 035895 389 ANNLIGRGSFGSVYKARLQDGMEFAIKVFHFS-----------------------------CSNEDFRALVLEYTTNGSL 439 (527)
Q Consensus 389 ~~~~lg~G~~g~vy~~~~~~~~~vavK~~~~~-----------------------------~~~~~~~~lv~ey~~~g~L 439 (527)
..+.|+.|.+..+|+.... +..+++|+.... +..++..++||||++|..+
T Consensus 40 ~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDE-VQTVFVKINERSYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEEEECCSSSSEEEEEESS-SCEEEEEEEEGGGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred eeEEeCCccceeeeEEEEC-CCeEEEEeCCcccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 3467999999999999864 568889975321 1123457899999998754
Q ss_pred H--------H---HHHhcCC---------------------CCCHHHHH---HHHH----------------HHHHH-HH
Q 035895 440 E--------K---VLYSSNY---------------------ILDILQRL---NIMI----------------DVTSA-LE 467 (527)
Q Consensus 440 ~--------~---~l~~~~~---------------------~~~~~~~~---~i~~----------------~i~~~-l~ 467 (527)
. . .++.... .-+|.... ++.. .+.+. .+
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 1 1 1222111 01354321 1111 11111 12
Q ss_pred HHh-cCCCCCeEecCCCCCCeeeCCCCcEEEeecc
Q 035895 468 YLH-FGYSTPIIHCDLKPHNKLLDDNIVAHLSDFG 501 (527)
Q Consensus 468 ylH-~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg 501 (527)
.+. +...+.+||+|+.+.|++++.++ +.|.||.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 332 12357799999999999999887 8899984
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=95.74 E-value=0.033 Score=53.80 Aligned_cols=44 Identities=25% Similarity=0.357 Sum_probs=31.9
Q ss_pred HHHHHHHHhc----CCCCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 462 VTSALEYLHF----GYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 462 i~~~l~ylH~----~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
+...+++++. .....+||+|+.+.||++++++.+.+.||+.+..
T Consensus 170 l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 170 IRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 3444555542 1245789999999999999876668999988753
No 435
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=95.66 E-value=0.061 Score=51.48 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=25.8
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
...++|+|+.+.||+ ..++.+.+.||..+..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 445899999999999 5567789999988764
No 436
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.22 E-value=0.22 Score=48.52 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=28.1
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
...++|+|+.+.||++++++.+.+.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 45689999999999999888899999988764
No 437
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.91 E-value=0.17 Score=50.70 Aligned_cols=29 Identities=28% Similarity=0.324 Sum_probs=24.6
Q ss_pred eEecCCCCCCeee------CCCCcEEEeecccccc
Q 035895 477 IIHCDLKPHNKLL------DDNIVAHLSDFGIAKL 505 (527)
Q Consensus 477 iiHrdlk~~nill------~~~~~~kl~Dfg~a~~ 505 (527)
++|+|+.+.||++ +++..+.+.||-+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999988763
No 438
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=90.96 E-value=0.2 Score=50.44 Aligned_cols=31 Identities=16% Similarity=0.281 Sum_probs=27.9
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
...++|+|++|.||+++.++ +++.||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 78899999999999998776 99999988775
No 439
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=87.36 E-value=0.64 Score=44.86 Aligned_cols=32 Identities=28% Similarity=0.297 Sum_probs=27.9
Q ss_pred CCCeEecCCCCCCeeeCCC----CcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDN----IVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~----~~~kl~Dfg~a~~ 505 (527)
...+||+|+.+.||+++.+ +.+.+.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 5679999999999999874 6889999998865
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=83.45 E-value=1 Score=43.11 Aligned_cols=30 Identities=20% Similarity=0.169 Sum_probs=25.9
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
...+||+|+++.||+++ + .+.+.||+.+..
T Consensus 194 ~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 194 TVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 45689999999999999 4 899999988764
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=77.27 E-value=1 Score=44.10 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=25.3
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
...++|+|+++.||++++++ +.+.||..|..
T Consensus 211 ~~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 211 TIVFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp CEEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred CeEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 45689999999999998654 89999987753
No 442
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=76.06 E-value=2.3 Score=43.15 Aligned_cols=17 Identities=29% Similarity=0.501 Sum_probs=15.1
Q ss_pred CCCeEecCCCCCCeeeC
Q 035895 474 STPIIHCDLKPHNKLLD 490 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~ 490 (527)
...++|+|+.+.|||++
T Consensus 289 ~~v~cHnDl~~gNIL~~ 305 (458)
T 2qg7_A 289 PIVLCHCDLLSSNIINT 305 (458)
T ss_dssp CEEEECSCCCGGGEEEC
T ss_pred CeeEEecCCCCCcEEee
Confidence 45689999999999998
No 443
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=72.63 E-value=1.2 Score=44.70 Aligned_cols=32 Identities=31% Similarity=0.306 Sum_probs=25.6
Q ss_pred CCCeEecCCCCCCeeeCCC----------------------------CcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDN----------------------------IVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~----------------------------~~~kl~Dfg~a~~ 505 (527)
...++|+|+.+.||+++++ +.+.+.||..|..
T Consensus 248 ~~v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~ 307 (429)
T 1nw1_A 248 PVTFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY 307 (429)
T ss_dssp CEEEECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred CeEEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence 3458999999999999875 6789999987763
No 444
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=69.79 E-value=2 Score=42.41 Aligned_cols=32 Identities=25% Similarity=0.252 Sum_probs=27.5
Q ss_pred CCCeEecCCCCCCeeeCCC----CcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDN----IVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~----~~~kl~Dfg~a~~ 505 (527)
...++|+|+.+.||+++.+ +.+.+.||..|..
T Consensus 219 ~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 219 PVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp CEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred CcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 4568999999999999876 7899999988764
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=67.88 E-value=2.2 Score=42.31 Aligned_cols=32 Identities=25% Similarity=0.229 Sum_probs=27.6
Q ss_pred CCCeEecCCCCCCeeeCCC------CcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDN------IVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~------~~~kl~Dfg~a~~ 505 (527)
...++|+|+.+.||+++++ +.+.+.||..|..
T Consensus 243 ~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 243 PVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp CEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred CeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 4568999999999999876 7899999988763
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=57.48 E-value=4.2 Score=40.67 Aligned_cols=31 Identities=23% Similarity=0.316 Sum_probs=26.8
Q ss_pred CCCeEecCCCCCCeeeCCCCcEEEeecccccc
Q 035895 474 STPIIHCDLKPHNKLLDDNIVAHLSDFGIAKL 505 (527)
Q Consensus 474 ~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~ 505 (527)
...++|+|+.+.||+ +.++.+.+.||..|..
T Consensus 261 ~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 261 SLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp CEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 356899999999999 7788999999988763
No 447
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=50.98 E-value=29 Score=30.92 Aligned_cols=75 Identities=16% Similarity=0.232 Sum_probs=50.3
Q ss_pred cceeEEEEEeccCC-cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeeccc
Q 035895 424 EDFRALVLEYTTNG-SLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGI 502 (527)
Q Consensus 424 ~~~~~lv~ey~~~g-~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~ 502 (527)
++...+.++.-+++ +.. .+. ..+...+++++..++...+ .+...-+|--+.|+|+++|.++.+++.-.|+
T Consensus 60 eD~~~i~y~~~~~~~~f~-~i~----~~~~~eKlrll~nl~~L~~----~~~~~r~tf~l~P~NL~f~~~~~p~i~hRGi 130 (219)
T 4ano_A 60 EDEVKVVIKPPSSFLTFA-AIR----KTTLLSRIRAAIHLVSKVK----HHSARRLIFIVCPENLMFNRALEPFFLHVGV 130 (219)
T ss_dssp SSEEEEEEECCTTCEEHH-HHH----TSCHHHHHHHHHHHHHHHS----SCCSSSEECCCCGGGEEECTTCCEEESCCEE
T ss_pred CCEEEEEEEcCcccCcHH-HHH----hcCHHHHHHHHHHHHHHHH----HhhhCceeEEEeCceEEEeCCCcEEEEEcCC
Confidence 34555555554333 344 332 3567778878777765444 1234557888999999999999999999998
Q ss_pred ccccC
Q 035895 503 AKLLT 507 (527)
Q Consensus 503 a~~~~ 507 (527)
-..++
T Consensus 131 ~~~lp 135 (219)
T 4ano_A 131 KESLP 135 (219)
T ss_dssp TTTBS
T ss_pred cccCC
Confidence 66554
No 448
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=41.82 E-value=46 Score=25.37 Aligned_cols=41 Identities=12% Similarity=-0.050 Sum_probs=19.1
Q ss_pred ccchhhcCCcCCcEEEeecCcccccCcccccCCCCCCEEecc
Q 035895 131 GISEEIGNLTDLISIDLGGNKLNGSISITLGKLQKLQFLSFR 172 (527)
Q Consensus 131 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 172 (527)
+-..+|.++.+|+.+.+..+ ++.+-..+|.++.+|+.+.+.
T Consensus 11 I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 11 MDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp SCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred ecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 33445555555555555432 232334444455555544443
No 449
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.81 E-value=70 Score=24.32 Aligned_cols=45 Identities=13% Similarity=0.087 Sum_probs=22.7
Q ss_pred ccccCcccccCCCCCCEEeccCcccccccChhhhcCcccCeeeeec
Q 035895 152 LNGSISITLGKLQKLQFLSFRGNELEGSIPNVLCHLAVLFQLDLRG 197 (527)
Q Consensus 152 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 197 (527)
++.+-..+|.++.+|+.+.+-.+ ++..-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34444455556666666555443 2223344555555555555543
No 450
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=32.03 E-value=87 Score=30.67 Aligned_cols=25 Identities=20% Similarity=0.251 Sum_probs=21.0
Q ss_pred cceeccCCceEEEEEEccCCcEEEEE
Q 035895 390 NNLIGRGSFGSVYKARLQDGMEFAIK 415 (527)
Q Consensus 390 ~~~lg~G~~g~vy~~~~~~~~~vavK 415 (527)
.+.+|.|..+.||++.. +++.++||
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK 63 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIK 63 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEE
Confidence 46789999999999965 46789999
No 451
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=27.57 E-value=40 Score=29.92 Aligned_cols=53 Identities=9% Similarity=0.171 Sum_probs=42.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEeecccccccC
Q 035895 450 LDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSDFGIAKLLT 507 (527)
Q Consensus 450 ~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~Dfg~a~~~~ 507 (527)
.+...+++++..|+...++++ .=+|=-+.|+|++++.++.+++.-.|+-..+.
T Consensus 78 ~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~f~~~~~p~i~~RGik~~l~ 130 (215)
T 4ann_A 78 FTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELFFTRDGLPIAKTRGLQNVVD 130 (215)
T ss_dssp SCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEEECTTSCEEESCCEETTTBS
T ss_pred cCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEEEcCCCCEEEEEccCccCCC
Confidence 567788888888877665444 34677899999999999999999999865554
No 452
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=20.29 E-value=2e+02 Score=25.66 Aligned_cols=61 Identities=15% Similarity=-0.020 Sum_probs=45.5
Q ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCeEecCCCCCCeeeCCCCcEEEee
Q 035895 437 GSLEKVLYSSNYILDILQRLNIMIDVTSALEYLHFGYSTPIIHCDLKPHNKLLDDNIVAHLSD 499 (527)
Q Consensus 437 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~ylH~~~~~~iiHrdlk~~nill~~~~~~kl~D 499 (527)
-+|.++|...+.++...++..++.|.+.+|.-.-. ...-..+=.-|..|++..+|.|...+
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~ 93 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP 93 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc
Confidence 38999999888999999999999999888766511 11111334456889999999998764
Done!