BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035899
(131 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
communis]
Length = 450
Score = 110 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 1/80 (1%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD 92
NQ + ++ + SCGLFHS L+V+G +WIWGKGDGGRLGFGHE+ FVPTLNP LD
Sbjct: 97 NQNSTITKQEAIEVGISCGLFHSALLVDGNIWIWGKGDGGRLGFGHENPVFVPTLNPNLD 156
Query: 93 DHVRCIALGGVHSIALTSLA 112
+C+ALGGVHS+ALTSL
Sbjct: 157 P-AKCVALGGVHSVALTSLG 175
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
G F + L G++W WG LG G++ + P P L+ V IA GG HS+ALT
Sbjct: 275 GFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGGYHSLALT 334
>gi|42568678|ref|NP_200895.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product [Arabidopsis thaliana]
gi|332010005|gb|AED97388.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 41 SKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIA 99
S F SCGLFHSGL ++G LWIWGKGDGGRLGFG E++ FVP LNP ++H +RCIA
Sbjct: 99 SSSFRIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIA 158
Query: 100 LGGVHSIALT 109
LGG+HS+ALT
Sbjct: 159 LGGLHSVALT 168
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 47 SSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVH 104
S SCG F L G+LW WG LG G + P P L+ + IA GG H
Sbjct: 266 SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYH 325
Query: 105 SIALT 109
S+ALT
Sbjct: 326 SLALT 330
>gi|297797029|ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297312234|gb|EFH42658.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 445
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 41 SKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIA 99
S F SCGLFHSGL ++G LWIWGKGDGGRLGFG E++ FVP LNP ++H +RCIA
Sbjct: 99 SSSFPIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIA 158
Query: 100 LGGVHSIALT 109
LGG+HS+ALT
Sbjct: 159 LGGLHSVALT 168
Score = 42.4 bits (98), Expect = 0.061, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 47 SSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVH 104
S SCG F L G+LW WG LG G + P P LD + IA GG H
Sbjct: 266 SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPLPVPSLDSVRITQIACGGYH 325
Query: 105 SIALT 109
S+ALT
Sbjct: 326 SLALT 330
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 27 ENSPNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
+N W L S+ +CG +HS L GK+ WG G G+LG +P
Sbjct: 298 DNLGGWEPLPVPSLDSVRITQIACGGYHSLALTKEGKVLSWGHGGHGQLGNSSLRNQKIP 357
Query: 86 T-LNPYLDDHVRCIALGGVHSIALT 109
T + D + IA GG S A+T
Sbjct: 358 TEIEALADKKIVFIACGGSSSAAIT 382
>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
vinifera]
Length = 489
Score = 105 bits (262), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/64 (76%), Positives = 54/64 (84%), Gaps = 1/64 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS LVV+GKLWIWGKGDGGRLGFG E AF+PTLNP LD +R ALGGVHS+AL
Sbjct: 97 SCGLFHSSLVVDGKLWIWGKGDGGRLGFGQEYPAFLPTLNPNLDS-IRSTALGGVHSVAL 155
Query: 109 TSLA 112
+SL
Sbjct: 156 SSLG 159
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG F L G+LW WG LG G + + P P L D + IA GG HS+
Sbjct: 256 SCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSL 315
Query: 107 ALT 109
ALT
Sbjct: 316 ALT 318
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+ G +HS L +GK+ WG G G+LG + +PT+ L D+HV IA GG S
Sbjct: 308 ASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSA 367
Query: 107 ALT 109
A+T
Sbjct: 368 AIT 370
>gi|190610056|gb|ACE79739.1| At5g60870 [Arabidopsis thaliana]
Length = 376
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 41 SKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIA 99
S F SCGLFHSGL ++G LWIWGKGDGGRLGFG E++ FVP LNP ++H +RCIA
Sbjct: 30 SSSFRIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIA 89
Query: 100 LGGVHSIALT 109
LGG+HS+ALT
Sbjct: 90 LGGLHSVALT 99
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 47 SSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVH 104
S SCG F L G+LW WG LG G + P P L+ + IA GG H
Sbjct: 197 SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYH 256
Query: 105 SIALT 109
S+ALT
Sbjct: 257 SLALT 261
>gi|42573750|ref|NP_974971.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332010006|gb|AED97389.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 383
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/70 (67%), Positives = 56/70 (80%), Gaps = 1/70 (1%)
Query: 41 SKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIA 99
S F SCGLFHSGL ++G LWIWGKGDGGRLGFG E++ FVP LNP ++H +RCIA
Sbjct: 30 SSSFRIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIA 89
Query: 100 LGGVHSIALT 109
LGG+HS+ALT
Sbjct: 90 LGGLHSVALT 99
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 47 SSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVH 104
S SCG F L G+LW WG LG G + P P L+ + IA GG H
Sbjct: 197 SVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYH 256
Query: 105 SIALT 109
S+ALT
Sbjct: 257 SLALT 261
>gi|356524449|ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 444
Score = 102 bits (254), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/106 (50%), Positives = 70/106 (66%), Gaps = 2/106 (1%)
Query: 6 EELYIF-SLMAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLW 64
EE ++ S +A A+ F +P +L + SCGLFHS L+V+G LW
Sbjct: 63 EETRLYPSPVANLAVPKSSFALSQTPGRRRLLPSPPKRALEVGLSCGLFHSSLIVDGALW 122
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
IWGKGDGGRLGFGHE+ FVPTLNP+LD+ + +ALGG+HS+ALTS
Sbjct: 123 IWGKGDGGRLGFGHENPLFVPTLNPHLDN-LLSVALGGLHSVALTS 167
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL--GGVHS 105
SCG F L V+G+LW WG LG G + + P P L++ V+ I L GG HS
Sbjct: 266 SCGGFFTMALTVDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLEN-VKIIQLASGGYHS 324
Query: 106 IALT 109
+ALT
Sbjct: 325 LALT 328
>gi|449518441|ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 55/64 (85%), Gaps = 1/64 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS L+VNGK+WIWGKGDGGRLGFGHE+ FVPTLN L+ VRCIALGG+HS+AL
Sbjct: 125 SCGLFHSSLLVNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLES-VRCIALGGLHSVAL 183
Query: 109 TSLA 112
+L
Sbjct: 184 NALG 187
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG F L V+GKLW WG LG G+ + P P L+D + I GG HS+
Sbjct: 284 SCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYHSL 343
Query: 107 ALT 109
ALT
Sbjct: 344 ALT 346
>gi|449456530|ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 55/64 (85%), Gaps = 1/64 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS L+VNGK+WIWGKGDGGRLGFGHE+ FVPTLN L+ VRCIALGG+HS+AL
Sbjct: 125 SCGLFHSSLLVNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLES-VRCIALGGLHSVAL 183
Query: 109 TSLA 112
+L
Sbjct: 184 NALG 187
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG F L V+GKLW WG LG G+ + P P L+D + I GG HS+
Sbjct: 284 SCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYHSL 343
Query: 107 ALT 109
LT
Sbjct: 344 VLT 346
>gi|124359876|gb|ABN06170.1| Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II [Medicago truncatula]
Length = 444
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/105 (50%), Positives = 68/105 (64%), Gaps = 1/105 (0%)
Query: 6 EELYIFSLMAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWI 65
EE ++ L+ F N+P S +K SCGLFHS LVV+G LW+
Sbjct: 64 EETRLYPSPVTNLLLAPKFTLFNTPGLLPGPEGSNNKGVEVGISCGLFHSCLVVDGGLWV 123
Query: 66 WGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
WGKGDGGRLG GHE + FVPTLNP+L++ V+ +ALGG+HS+ALTS
Sbjct: 124 WGKGDGGRLGLGHESSMFVPTLNPHLEN-VKSVALGGLHSVALTS 167
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG F + L G+LW WG LG G + P P L+ V IA GG HS+
Sbjct: 266 SCGGFFTLALTEEGQLWNWGANSNYELGRGDRIGGWRPRPVPSLEKVRVIQIASGGYHSL 325
Query: 107 ALT 109
ALT
Sbjct: 326 ALT 328
>gi|147844431|emb|CAN82093.1| hypothetical protein VITISV_031209 [Vitis vinifera]
Length = 363
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 43/51 (84%), Gaps = 1/51 (1%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLA 112
+LWIWGKGDGGRLGFGHE AF+PTLNP LD +R ALGGVHS+AL+SL
Sbjct: 93 ELWIWGKGDGGRLGFGHEYPAFLPTLNPNLDS-IRSTALGGVHSVALSSLG 142
>gi|224118018|ref|XP_002331537.1| predicted protein [Populus trichocarpa]
gi|222873761|gb|EEF10892.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLA 112
+WGKGDGGRLGFGHE+ AF+PTLNP+LD VR IALGGVHS A+TSL
Sbjct: 1 MWGKGDGGRLGFGHENPAFLPTLNPFLDS-VRSIALGGVHSAAITSLG 47
>gi|218202624|gb|EEC85051.1| hypothetical protein OsI_32385 [Oryza sativa Indica Group]
Length = 624
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS +VV+G W+WGKGDGGRLG G E +AFVP NP L + +R +ALGG+HS AL
Sbjct: 97 SCGLFHSAVVVDGGAWVWGKGDGGRLGLGDESSAFVPRHNPNLSE-LRVLALGGIHSAAL 155
Query: 109 TS 110
T+
Sbjct: 156 TA 157
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
G F L +G+LW WG LG G + + P L P L + HV +A GG HS+ALT
Sbjct: 259 GFFTMALTSDGQLWSWGANSNFELGRGSNSSDWRPQLIPSLKNLHVIQVACGGYHSLALT 318
Query: 110 SLAV 113
V
Sbjct: 319 DEGV 322
>gi|222642086|gb|EEE70218.1| hypothetical protein OsJ_30332 [Oryza sativa Japonica Group]
Length = 607
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS +VV+G W+WGKGDGGRLG G E +AFVP NP L + +R +ALGG+HS AL
Sbjct: 97 SCGLFHSAVVVDGGAWVWGKGDGGRLGLGDESSAFVPRHNPNLSE-LRVLALGGIHSAAL 155
Query: 109 TS 110
T+
Sbjct: 156 TA 157
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
G F L +G+LW WG LG G + + P L P L + HV +A GG HS+ALT
Sbjct: 259 GFFTMALTSDGQLWSWGANSNFELGRGSNSSDWRPQLIPSLKNLHVIQVACGGYHSLALT 318
Query: 110 SLAV 113
V
Sbjct: 319 DEGV 322
>gi|194701680|gb|ACF84924.1| unknown [Zea mays]
gi|414886543|tpg|DAA62557.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 432
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS L+V G W+WGKGDGGRLG G E +AFVP NP L D +R +ALGG+HS AL
Sbjct: 92 SCGLFHSSLLVEGGAWVWGKGDGGRLGLGDESSAFVPHSNPNLRD-LRLLALGGIHSAAL 150
Query: 109 TS 110
T+
Sbjct: 151 TT 152
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
G F L +G+LW WG LG G + + P L P L V +A GG HS+ALT
Sbjct: 254 GFFTMALTSDGQLWSWGANSNFELGRGSNFSDWRPQLVPSLKSTRVIQVACGGYHSLALT 313
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
+CGLFHS L +++WGKGDGGRLG E + P +NP + V+ + GG+H+IAL
Sbjct: 92 TCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRI-KRVQMASAGGLHNIAL 150
Query: 109 TSLA 112
T +
Sbjct: 151 TEVG 154
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
KR +S+ GL + L G ++ WG G G LG G + +P L P+ D V ++
Sbjct: 135 KRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVH-VS 193
Query: 100 LGGVHSIALT 109
GG H+ A+T
Sbjct: 194 AGGSHTAAVT 203
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALT 109
G F L +G+LW WG LG G + P + L+D +A GG H+ ALT
Sbjct: 253 GFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALT 312
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
+CGLFHS L +++WGKGDGGRLG E + P +NP + V+ + GG+H+IAL
Sbjct: 92 TCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRI-KRVQMASAGGLHNIAL 150
Query: 109 TSLA 112
T +
Sbjct: 151 TEVG 154
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
KR +S+ GL + L G ++ WG G G LG G + +P L P+ D V ++
Sbjct: 135 KRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGPWKDRIVH-VS 193
Query: 100 LGGVHSIALT 109
GG HS A+T
Sbjct: 194 AGGSHSAAVT 203
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALT 109
G F L +G+LW WG LG G + P + L+D +A GG H+ ALT
Sbjct: 253 GFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALT 312
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 6/73 (8%)
Query: 43 RFSNSSSCGLFHSGLVVNGKLWIWGKGDG-GRLGFGHED-----AAFVPTLNPYLDDHVR 96
R + S+ G + + +G+L+ WG+ +G GRLG G+ D A PT LD +
Sbjct: 188 RIVHVSAGGSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDVPIA 247
Query: 97 CIALGGVHSIALT 109
+ GG ++ALT
Sbjct: 248 SVYCGGFFTMALT 260
>gi|242045582|ref|XP_002460662.1| hypothetical protein SORBIDRAFT_02g032760 [Sorghum bicolor]
gi|241924039|gb|EER97183.1| hypothetical protein SORBIDRAFT_02g032760 [Sorghum bicolor]
Length = 432
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS L+V G +W+WGKGDGGRLG G E +AFVP NP L D +R +ALGG+HS AL
Sbjct: 92 SCGLFHSALLVEGSVWVWGKGDGGRLGLGDESSAFVPRPNPNLRD-LRLLALGGIHSAAL 150
Query: 109 TS 110
T+
Sbjct: 151 TT 152
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
G F L +G+LW WG LG G + + P L P L V +A GG HS+ALT
Sbjct: 254 GFFTMALTSDGQLWSWGANSNFELGRGSNFSDWRPQLVPSLKSIRVIQVACGGYHSLALT 313
>gi|326533910|dbj|BAJ93728.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/62 (64%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS L+V+G W+WGKGDGGRLG G E +AFVP NP L +R +ALGG+HS AL
Sbjct: 99 SCGLFHSALLVDGAAWVWGKGDGGRLGLGDEASAFVPRANPNLAG-LRVLALGGIHSAAL 157
Query: 109 TS 110
T+
Sbjct: 158 TA 159
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
G F L +G+LW WG LG G + + P + P L + HV +A GG HS+ALT
Sbjct: 261 GFFTLALTSDGQLWSWGANSNFELGRGSNSSDWRPQIVPSLKNVHVIQVACGGYHSLALT 320
>gi|357160066|ref|XP_003578646.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Brachypodium distachyon]
Length = 432
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS L+V+G W+WGKGDGGRLG G E +AFVP NP L D +R +ALGG+HS +L
Sbjct: 92 SCGLFHSALLVDGGTWVWGKGDGGRLGLGDESSAFVPRANPNLSD-LRVLALGGIHSASL 150
Query: 109 TS 110
T+
Sbjct: 151 TA 152
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
G F L G+LW WG LG G + + P L P L + V +A GG HS+ALT
Sbjct: 254 GFFTIALTSEGQLWSWGANSNFELGRGSNSSDWRPQLVPSLKNIRVVQVACGGYHSLALT 313
>gi|226498894|ref|NP_001144762.1| uncharacterized protein LOC100277821 [Zea mays]
gi|195646694|gb|ACG42815.1| hypothetical protein [Zea mays]
Length = 432
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/62 (66%), Positives = 48/62 (77%), Gaps = 1/62 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS L+V G W+WGKGDGGRLG G E +AFVP NP L D +R +ALGG+HS AL
Sbjct: 92 SCGLFHSSLLVEGGAWVWGKGDGGRLGLGDESSAFVPRSNPNLRD-LRLLALGGIHSAAL 150
Query: 109 TS 110
T+
Sbjct: 151 TT 152
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
G F L +G+LW WG LG G + + P L P L V +A GG HS+ALT
Sbjct: 254 GFFTMALTSDGQLWSWGANSNFELGRGSNFSDWRPQLVPSLKSTRVIQVACGGYHSLALT 313
>gi|52076951|dbj|BAD45962.1| HERC2 -like [Oryza sativa Japonica Group]
gi|52077045|dbj|BAD46077.1| HERC2 -like [Oryza sativa Japonica Group]
Length = 269
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/62 (64%), Positives = 49/62 (79%), Gaps = 1/62 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCGLFHS +VV+G W+WGKGDGGRLG G E +AFVP NP L + +R +ALGG+HS AL
Sbjct: 97 SCGLFHSAVVVDGGAWVWGKGDGGRLGLGDESSAFVPRHNPNLSE-LRVLALGGIHSAAL 155
Query: 109 TS 110
T+
Sbjct: 156 TA 157
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 27 ENSPNWNQLANLSVSKRFSNSSSCGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
+N + +L L V K + CG F L +G +W WGKG+G RLG G ED P
Sbjct: 164 KNPKSIERLQGLGVCKVY-----CGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHP 218
Query: 86 TLNPYLD-DHVRCIALGGVHSIALTSLAVEEC 116
L LD HV +++G +H +ALT C
Sbjct: 219 KLVEALDGKHVVDVSVGSIHCLALTDAGEVYC 250
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH----VRCIALGGV 103
SCG HS V + G+L+ WG+G+ GRLG G + VP L L H V C G
Sbjct: 75 SCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVAC-GSGDA 133
Query: 104 HSIA 107
H++A
Sbjct: 134 HTLA 137
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 36 ANLSVSKRFSNSSSCGL----FHSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
AN++V ++ N SS + HSG L + GKL+ WG+G+ G+LG G+ P
Sbjct: 2493 ANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHP 2552
Query: 86 TL-NPYLDDHVRCIALGGVHSIALTS 110
L + + VR ++ G HS A+ S
Sbjct: 2553 KLIDTFKSSCVRDMSCGSSHSAAILS 2578
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALTS 110
L G+++ WG GDGG+LG G PTL L V I+ G HS A+TS
Sbjct: 31 ALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTS 86
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG F L +G +W WGKGD RLG G++ P + L + +A+G +H +
Sbjct: 2673 ACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQIVDGLRGKKIVDVAVGALHCL 2732
Query: 107 ALT 109
A+T
Sbjct: 2733 AVT 2735
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALTS 110
L +G +W WG GD G+LG G + VP L C +A G S+AL++
Sbjct: 2629 ALTDDGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALST 2684
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
SCG HS + N +L+ WGKG GRLG G + +P +
Sbjct: 3499 SCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKV 3538
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 35 LANLSVSKRFSNSSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD- 92
L L VSK CG F L +G ++ WGKGD RLG G +D P L
Sbjct: 3596 LIGLGVSK-----VECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQG 3650
Query: 93 DHVRCIALGGVHSIALT 109
V IA G +H +A T
Sbjct: 3651 KKVITIATGSLHCVAST 3667
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 12/122 (9%)
Query: 4 NDEELYIFSLMAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVN-GK 62
+D ELY++ +E L + + +++P N +S +CG +H+ V + G+
Sbjct: 156 DDGELYVWGGGSEGQLGLGDIDDKSTPTLLSTDNKVIS------VACGYYHTAFVTDVGE 209
Query: 63 LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEECNRCLIL 122
++ +G+GDGG+LG G + V + + + +A GG H++ LT EC +
Sbjct: 210 VFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEKAKSVACGGSHTVVLT-----ECGKVYTF 264
Query: 123 GE 124
GE
Sbjct: 265 GE 266
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 46/106 (43%), Gaps = 7/106 (6%)
Query: 8 LYIFSLMAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIW 66
LY F + L V S N P + R + + G HS L +G+L++W
Sbjct: 109 LYTFGANGDGQLGVEDIPSSNCP-----VKVECEPRQYKALAAGADHSVALTDDGELYVW 163
Query: 67 GKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLA 112
G G G+LG G D PTL D+ V +A G H+ +T +
Sbjct: 164 GGGSEGQLGLGDIDDKSTPTLLS-TDNKVISVACGYYHTAFVTDVG 208
>gi|328873577|gb|EGG21944.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 736
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 56/107 (52%), Gaps = 9/107 (8%)
Query: 9 YIFSLMAEEALVVRLFNSENSPNWNQ---LANLSVSKRFSNSS--SCGLFHSGLV-VNGK 62
Y SL A L LF + ++Q A+L++ K+FSN S G HSGLV V+G
Sbjct: 11 YFVSLNANGQLGTNLFEGSDELVYDQDNCTADLTLLKQFSNIKCISMGTLHSGLVTVDGG 70
Query: 63 LWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIAL 108
LW +G G G+LG G+ D +P + P + ++ G H++AL
Sbjct: 71 LWTFGNGSFGKLGLGNTDNYKIPMQVRPGV--QFSMVSCGNEHTLAL 115
>gi|302803759|ref|XP_002983632.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
gi|300148469|gb|EFJ15128.1| hypothetical protein SELMODRAFT_180358 [Selaginella moellendorffii]
Length = 863
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 32 WNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL 91
W+ A + V R+SN+ S ++GKL+ WG GD RLG G ++ VPT L
Sbjct: 292 WHTAAVVEVMSRYSNAGSS--------LSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAAL 343
Query: 92 DDH-VRCIALGGVHSIALTS 110
DH R +A G ++ALT+
Sbjct: 344 VDHNFRQVACGHSLTVALTT 363
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 38 LSVSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHV 95
L + + SCG +H + L G + WGKG GRLG G + VPTL L D V
Sbjct: 391 LRLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPTLVEALRDKQV 450
Query: 96 RCIALGGVHSIAL 108
+ ++ G + A+
Sbjct: 451 KKVSCGSSFTSAI 463
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
+CG+ H+ LV G+++ WG+ GGRLG G + D A ++ V+ +A G HS
Sbjct: 129 ACGVRHTALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSC 188
Query: 107 ALT 109
A+T
Sbjct: 189 AVT 191
>gi|302817810|ref|XP_002990580.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
gi|300141748|gb|EFJ08457.1| hypothetical protein SELMODRAFT_185380 [Selaginella moellendorffii]
Length = 863
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 32 WNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL 91
W+ A + V R+SN+ S ++GKL+ WG GD RLG G ++ VPT L
Sbjct: 292 WHTAAVVEVMSRYSNAGSS--------LSGKLFTWGDGDKNRLGHGDKEQKLVPTCVAAL 343
Query: 92 DDH-VRCIALGGVHSIALTS 110
DH R +A G ++ALT+
Sbjct: 344 VDHNFRQVACGHSLTVALTT 363
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
+CG+ H+ LV G+++ WG+ GGRLG G + D A ++ V+ +A G HS
Sbjct: 129 ACGVRHAALVTRQGEVFSWGEESGGRLGHGVDADVAHPQLIDSLASSTVQYVACGEYHSC 188
Query: 107 ALT 109
A+T
Sbjct: 189 AVT 191
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 38 LSVSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHV 95
L + + SCG +H + L G + WGKG GRLG G + VP+L L D V
Sbjct: 391 LRLGRTLIEEVSCGAYHVAALTSKGDVCTWGKGANGRLGHGDAEDRDVPSLVEALRDKQV 450
Query: 96 RCIALGGVHSIAL 108
+ ++ G + A+
Sbjct: 451 KKVSCGSSFTSAI 463
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
+G L+ WG+GD GRLG G + + PTL L H V +ALGG HS+ALT
Sbjct: 255 SGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALGGGHSLALT 305
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTSLA 112
+GKL+ WG+G GRLG G E++ P L + ++ + GG +IAL+ A
Sbjct: 147 SGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIALSHTA 200
>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
Length = 1413
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 48 SSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTLNP-YLDDHVRCIALGGV 103
++CG H+ L+ NG L+ +G G G+LG G E+ F PTL P +LD HV + GG
Sbjct: 301 AACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGC 360
Query: 104 HSIALTSLAVEECNRCLILGEEE 126
H + L E + LIL E++
Sbjct: 361 HMLVLAKPRTERPDD-LILEEDD 382
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 12 SLMAEEALVVRLFNSENSPNWNQLAN------LSVSKRFSNSSSCGLFHSGLV-VNGKLW 64
+L + L +R NSE + +N +SV KR SCG +HS V V+G L+
Sbjct: 155 ALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKRVF-WVSCGYYHSAFVTVDGALY 213
Query: 65 IWGKGDGGRLGFGHEDAAF--VPTLNPYLDDHVRCIALGGVHSIALT 109
+G+ D G+LG E A VP + D V +A GG H++ALT
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALT 260
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
SCG H+ LV NGKL+++G + G+LG G + PT L + V+ A G H++
Sbjct: 42 SCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTL 101
Query: 107 ALTS 110
TS
Sbjct: 102 VFTS 105
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 48 SSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTLNP-YLDDHVRCIALGGV 103
++CG H+ L+ NG L+ +G G G+LG G E+ F PTL P +LD HV + GG
Sbjct: 301 AACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGC 360
Query: 104 HSIALTSLAVEECNRCLILGEEE 126
H + L E + LIL E++
Sbjct: 361 HMLVLAKPRTERPDD-LILEEDD 382
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAF--VPTLNPYLDDHVRCIALGGVHS 105
SCG +HS V V+G L+ +G+ D G+LG E A VP + D V +A GG H+
Sbjct: 197 SCGYYHSAFVTVDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHT 256
Query: 106 IALT 109
+ALT
Sbjct: 257 VALT 260
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
SCG H+ LV NGKL+++G + G+LG G + PT L + V+ A G H++
Sbjct: 42 SCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTL 101
Query: 107 ALTS 110
TS
Sbjct: 102 VFTS 105
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 36 ANLSVSKRFSNSSS----CGLFHSGLVVNGKLWIWGKGDGGRLGFG-HEDAAFVPTLNPY 90
N+S+ K N S CG +H+ + NG+L+ WGK D G+LG G + +PTL
Sbjct: 210 GNISLPKEVKNLKSTQIACGYYHTVAINNGQLYSWGKNDSGQLGIGIYSAKEILPTLVRD 269
Query: 91 LDDH-VRCIALGGVHSIAL 108
L+D + +A G H++AL
Sbjct: 270 LEDQEIVSVACGCYHTLAL 288
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 48 SSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTLNP-YLDDHVRCIALGGV 103
++CG H+ L+ NG L+ +G G G+LG G E+ F PTL P +LD HV + GG
Sbjct: 301 AACGENHTALITDNGLLYTFGDGRHGKLGLGEENFTNQFKPTLCPRFLDYHVHSVTCGGC 360
Query: 104 HSIALTSLAVEECNRCLILGEEE 126
H + L E + LIL E++
Sbjct: 361 HMLVLAKPRTERPDD-LILEEDD 382
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 10/107 (9%)
Query: 12 SLMAEEALVVRLFNSENSPNWNQLAN------LSVSKRFSNSSSCGLFHSGLV-VNGKLW 64
+L + L +R NSE + +N +SV KR SCG +HS V V+G L+
Sbjct: 155 ALTQDGRLYMRGDNSEGQIGLGKESNALTPQEVSVGKRVF-WVSCGYYHSAFVTVDGALY 213
Query: 65 IWGKGDGGRLGFGHEDAAF--VPTLNPYLDDHVRCIALGGVHSIALT 109
+G+ D G+LG E A VP + D V +A GG H++ALT
Sbjct: 214 TFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRVVQVACGGGHTVALT 260
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
SCG H+ LV NGKL+++G + G+LG G + PT L + V+ A G H++
Sbjct: 42 SCGDEHTALVTENGKLFMFGSNNWGQLGLGTKTTVNKPTCVKALRSERVKLTACGRTHTL 101
Query: 107 ALTS 110
TS
Sbjct: 102 VFTS 105
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL- 91
++L +++V + F G F + L G+++ WGKGD RLG G+E+ P L L
Sbjct: 662 DKLLDINVVRVFCG----GQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLR 717
Query: 92 DDHVRCIALGGVHSIALT 109
D ++ +++GG H +ALT
Sbjct: 718 DKKIKDLSVGGTHILALT 735
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
+CG + + L +G+L+ WG+G+ GRLG G D VPTL L H+
Sbjct: 567 ACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHM 614
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFG----HEDAAFVPTLNPYLDDHVRCIALGG 102
S S G + L +G ++ WG GDGGRLG G H++ + TL L+ ++ IA G
Sbjct: 514 SHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIETL---LEKNIIFIACGS 570
Query: 103 VHSIALTS 110
+S AL++
Sbjct: 571 TYSAALSA 578
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G++ PTL L + +A+G +H +A
Sbjct: 3203 CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLA 3262
Query: 108 LT 109
+T
Sbjct: 3263 VT 3264
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIAL--GGVHSIALT 109
GKL+ G+G GRLG G + P L P+L +V + +A+ GG H++ALT
Sbjct: 3003 GKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALT 3054
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G L+ WGKG GRLG G D P + L D+
Sbjct: 4077 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 4123
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIAL--GGVHSIALTS 110
+ +GK++ G G GRLG G D+ VPTL + ++ +A+ GG H +AL+S
Sbjct: 3979 AVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSS 4036
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIALTS 110
L G ++ WG+GD G+LG G+ + P L L + IA GG HS A+TS
Sbjct: 4033 ALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITS 4088
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 41 SKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
SKR + + CG HS + NG+L+ WG G+ GRLG G P L
Sbjct: 3089 SKRIRDIA-CGSGHSAAIASNGELYTWGLGEYGRLGHGDTATQMKPKL 3135
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
HSG L +GK++ WG+G+ G+LG G+ P L L +R IA G HS
Sbjct: 3044 HSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSA 3103
Query: 107 ALTS 110
A+ S
Sbjct: 3104 AIAS 3107
>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
Length = 1075
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHS 105
+CG FHS + ++G L+ WGKGD G LG G+E + +VP +L + HV IA G H+
Sbjct: 366 ACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHT 425
Query: 106 IALTS 110
+TS
Sbjct: 426 AVVTS 430
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G+++ VPT L +
Sbjct: 470 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP 529
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 530 NFCQVACGHSLTVALTT 546
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANL------------SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N + K F +CG +H ++ + +++ WGKG GRLG
Sbjct: 555 SPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 614
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D PTL L D V+ IA G + A+
Sbjct: 615 HGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648
>gi|325179516|emb|CCA13913.1| regulator of chromosome condensation (RCC1) putative [Albugo
laibachii Nc14]
Length = 1044
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 11/87 (12%)
Query: 34 QLANLSVSKRFSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFV--P 85
Q + + SNS S CG H GL ++GKL++WG DGGRLG G E ++ P
Sbjct: 564 QATKMELPYAISNSQSVRFVSCGAAHCGLTTLDGKLFMWGCADGGRLGLGAEFHDYIAKP 623
Query: 86 TLNPYLDDH---VRCIALGGVHSIALT 109
TL L VR +A G HS+ T
Sbjct: 624 TLVEPLSKEGVRVRQVACGTAHSVLCT 650
>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1075
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHS 105
+CG FHS + ++G L+ WGKGD G LG G+E + +VP +L + HV IA G H+
Sbjct: 366 ACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHT 425
Query: 106 IALTS 110
+TS
Sbjct: 426 AVVTS 430
Score = 45.1 bits (105), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G+++ VPT L +
Sbjct: 470 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP 529
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 530 NFCQVACGHSLTVALTT 546
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANL------------SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N + K F +CG +H ++ + +++ WGKG GRLG
Sbjct: 555 SPVYGQLGNSHADGKLPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 614
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D PTL L D V+ IA G + A+
Sbjct: 615 HGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 648
>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
Length = 1062
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHS 105
+CG FHS + ++G L+ WGKGD G LG G+E + +VP +L + HV IA G H+
Sbjct: 353 ACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHT 412
Query: 106 IALTS 110
+TS
Sbjct: 413 AVVTS 417
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G+++ VPT L +
Sbjct: 457 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP 516
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 517 NFCQVACGHSLTVALTT 533
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANL------------SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N + K F +CG +H ++ + +++ WGKG GRLG
Sbjct: 542 SPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 601
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D PTL L D V+ IA G + A+
Sbjct: 602 HGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAV 635
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIALGGVHS 105
SCG H+ L+V GKL+++G G G+LGFG D +P L P D + ++LG HS
Sbjct: 208 SCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHS 267
Query: 106 IALT 109
A+T
Sbjct: 268 AAVT 271
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCG +S + N G L +WG G G+LGFG+ + VP +N L + ++ +A H+ A
Sbjct: 48 SCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLKNVIQ-VACSDRHTAA 106
Query: 108 LTS 110
+ S
Sbjct: 107 ILS 109
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG +H+G L + K WG G GRLG G F P L L ++ I+ GG H+
Sbjct: 156 SCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTA 215
Query: 107 AL 108
L
Sbjct: 216 IL 217
>gi|359479203|ref|XP_002279847.2| PREDICTED: uncharacterized protein LOC100248282 isoform 1 [Vitis
vinifera]
Length = 1107
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVV-------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
S+CG++H+ VV +GKL+ WG GD GRLG G ++A VPT L D
Sbjct: 476 SACGVWHTAAVVEIMVGNPSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDP 535
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 536 NFCRVACGHSLTVALTT 552
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 29 SPNWNQLANLS------------VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N ++K F +CG +H ++ + +++ WGKG GRLG
Sbjct: 561 SPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 620
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALG 101
G D PTL L D V+ IA G
Sbjct: 621 HGDTDDRNSPTLVEALKDKQVKSIACG 647
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 318 ACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTC 377
Query: 107 ALT 109
A+T
Sbjct: 378 AVT 380
>gi|320169045|gb|EFW45944.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 411
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
L V GKL+ WG+G GRLG GH A+VPT P ++ V +A G H++A+
Sbjct: 355 ALTVTGKLFAWGRGQWGRLGLGHTADAWVPTRVP-IEGKVTSVACGVDHTLAI 406
>gi|403353979|gb|EJY76535.1| hypothetical protein OXYTRI_01950 [Oxytricha trifallax]
Length = 761
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG HS V + G+++ WG + G+LG GH++ PT P LD+ HV IA G HSIA
Sbjct: 210 CGNHHSFYVNDKGQVYSWGLNNHGQLGIGHKENTATPTHIPELDNQHVSVIAGGEHHSIA 269
Query: 108 LTS 110
+T+
Sbjct: 270 VTA 272
>gi|194758819|ref|XP_001961656.1| GF14822 [Drosophila ananassae]
gi|190615353|gb|EDV30877.1| GF14822 [Drosophila ananassae]
Length = 453
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN+++ CG+FH G V +G L++WGK G LG GH+ F P ++ V
Sbjct: 379 FSNATTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKAAINGKVSK 437
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 438 VAFGVDHTIAL 448
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIALGGVHS 105
SCG H+ L+V GKL+++G G G+LGFG D +P L P D + ++LG HS
Sbjct: 208 SCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQHS 267
Query: 106 IALT 109
A+T
Sbjct: 268 AAVT 271
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCG +S + N G L +WG G G+LGFG+ + VP +N L + V+ +A H+ A
Sbjct: 48 SCGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRVNLSLKNVVQ-VACSDRHTAA 106
Query: 108 LTS 110
+ S
Sbjct: 107 ILS 109
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG +H+G L + K WG G GRLG G F P L L ++ I+ GG H+
Sbjct: 156 SCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGLPIKEISCGGHHTA 215
Query: 107 AL 108
L
Sbjct: 216 IL 217
>gi|322711121|gb|EFZ02695.1| BTB domain and ankyrin repeat containing protein [Metarhizium
anisopliae ARSEF 23]
Length = 1592
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 28 NSPNWNQLANLSVSKRFS-NSSSCGLFHSGLVVN---GKLWIWGKGDGGRLGFGHEDA-- 81
+ P+ N + L ++R + FH+ ++ + L+I G G GRLG G E+
Sbjct: 292 SQPDLNDIPTLVRNQRLAIRDIVMSKFHTAVLTDDPVSNLYICGVGRRGRLGLGDENTQF 351
Query: 82 AFVPTLNPYLDDHVRCIALGGVHSIALT 109
FVP P++D +R +ALG HS+A+T
Sbjct: 352 KFVPVQGPFIDRKIRQVALGQDHSMAVT 379
>gi|195437580|ref|XP_002066718.1| GK24412 [Drosophila willistoni]
gi|194162803|gb|EDW77704.1| GK24412 [Drosophila willistoni]
Length = 461
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN+++ CG+FH G + +G L++WGK G LG GH+ F P L+ V
Sbjct: 387 FSNATTVVSIGCGVFHMGAINSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKTALNGKVTK 445
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 446 VAYGVDHTIAL 456
>gi|348534545|ref|XP_003454762.1| PREDICTED: hypothetical protein LOC100691941 [Oreochromis
niloticus]
Length = 1536
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFG-HEDAAF-VPTLNPYLDDHVRCIALGGVHS 105
SCG +HS LV V+G L+ +G+ D G+LG G H+ VP L + + VR +A GG H+
Sbjct: 197 SCGYYHSALVTVDGALYTFGERDSGKLGLGTHQLPGHRVPQLVKSIKEPVRQVACGGGHT 256
Query: 106 IAL 108
+AL
Sbjct: 257 VAL 259
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG H+ L+ NGKL+++G + G+LG G + PT L + V+ +A G H++
Sbjct: 42 ACGDEHTALITENGKLFMFGSNNWGQLGLGSKVTVNKPTCVKALKSEKVQLVACGRNHTL 101
Query: 107 ALTS 110
T+
Sbjct: 102 ICTA 105
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
SCG H+ ++ + GK++ WG+GD GRLG G FVP L L D VR + G H+
Sbjct: 40 SCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTA 99
Query: 107 ALT 109
A+T
Sbjct: 100 AVT 102
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H+ V V+G+L+ WG G G+LG G+E+ P+L + +VR +A G H++
Sbjct: 92 TCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTV 151
Query: 107 AL 108
L
Sbjct: 152 VL 153
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAF 83
NSE + + + + KR + CG FH+ V +G ++ WG G+ G+LG G +
Sbjct: 226 NSERNQPVAKCIDALIGKRIKQVA-CGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQI 284
Query: 84 VPT-LNPYLDDHVRCIALGGVHSIALT 109
+PT + +D ++ + G H++ALT
Sbjct: 285 IPTRVESLIDKNIIQLTCGWSHTVALT 311
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 48 SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
S+CG + L NG+++ +G+G GRLG E + ++ + ++ +A GG H+
Sbjct: 197 SACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQVACGGFHTA 256
Query: 107 ALT 109
A+T
Sbjct: 257 AVT 259
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 29 SPNWNQLANL-SVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
SP Q+ L +VS+ +S S F L +G L+ WGKG GGRLG G+ + + VP L
Sbjct: 714 SPIPVQIDTLVNVSRIYSGSQ----FSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKL 769
Query: 88 NPYLD-DHVRCIALGGVHSIALTS 110
L+ + +A+G H +ALTS
Sbjct: 770 VRALEGKKIADVAVGSAHCLALTS 793
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VHS 105
CG + + + + G+L+ WG+G GRLG G+ D VPT L + V +ALG HS
Sbjct: 627 CGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHS 686
Query: 106 IALT 109
+ +T
Sbjct: 687 MCVT 690
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFV 84
N+ +P + N V K+ + S G L ++GK++ WG+G+ G+LG G+
Sbjct: 2963 NNVPTPRQVPILNQYVVKKVAVHSG-GKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEK 3021
Query: 85 PTLNPYL-DDHVRCIALGGVHSIALTS 110
P L L VR IA G HS A+TS
Sbjct: 3022 PKLIESLRTKRVRDIACGSSHSAAITS 3048
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL--GGVHSIALT 109
+GKL+ G+G GRLG GH + P P L+ + V+ +A+ GG H++ALT
Sbjct: 2943 DGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALT 2995
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L +G++W WGKGD RLG G + PT + V +A+G +H +A
Sbjct: 3144 CGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3203
Query: 108 LT 109
+T
Sbjct: 3204 VT 3205
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALT 109
++W WG GDGGRLG G + PT+ L + C I G +S A+T
Sbjct: 588 EVWSWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSAAIT 636
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G+L+ WG G+ GRLG G P L L H
Sbjct: 3037 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGH 3083
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHS 105
+CG +HS + ++G L+ WGKGD G LG G+E + +VP +L + HV IA G H+
Sbjct: 365 ACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHT 424
Query: 106 IALTS 110
+TS
Sbjct: 425 AVVTS 429
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANL------------SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N + K F +CG +H ++ + +++ WGKG GRLG
Sbjct: 554 SPVYGQLGNPHADGKVPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 613
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D PTL L D V+ IA G + A+
Sbjct: 614 HGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 647
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD RLG G ++ VPT L +
Sbjct: 469 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEP 528
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 529 NFCQVACGHSLTVALTT 545
>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1102
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G ++ VPT L DH
Sbjct: 473 AACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDH 532
Query: 95 -VRCIALGGVHSIALTS 110
R +A G ++ALT+
Sbjct: 533 NFRKVACGHSLTVALTT 549
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG H V + +++ WGKG GRLG G ++ PTL L + V+ IA G +
Sbjct: 590 ACGAHHVACVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTA 649
Query: 107 AL 108
A+
Sbjct: 650 AV 651
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHS 105
+CG +HS + ++G L+ WGKGD G LG G+E + +VP +L + HV IA G H+
Sbjct: 370 ACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHT 429
Query: 106 IALTS 110
+TS
Sbjct: 430 AVVTS 434
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANL------------SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N + K F +CG +H ++ + +++ WGKG GRLG
Sbjct: 559 SPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 618
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D PTL L D V+ IA G + A+
Sbjct: 619 HGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 652
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD RLG G ++ VPT L +
Sbjct: 474 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEP 533
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 534 NFCQVACGHSLTVALTT 550
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHS 105
+CG +HS + ++G L+ WGKGD G LG G+E + +VP +L + HV IA G H+
Sbjct: 404 ACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHT 463
Query: 106 IALTS 110
+TS
Sbjct: 464 AVVTS 468
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANL------------SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N + K F +CG +H ++ + +++ WGKG GRLG
Sbjct: 593 SPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG 652
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D PTL L D V+ IA G + A+
Sbjct: 653 HGDADDRNSPTLVESLKDKQVKSIACGSNFTAAV 686
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD RLG G ++ VPT L +
Sbjct: 508 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEP 567
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 568 NFCQVACGHSLTVALTT 584
>gi|198474556|ref|XP_001356744.2| GA17737 [Drosophila pseudoobscura pseudoobscura]
gi|198138441|gb|EAL33809.2| GA17737 [Drosophila pseudoobscura pseudoobscura]
Length = 458
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN+++ CG+FH G V +G L++WGK G LG GH+ F P ++ V
Sbjct: 384 FSNATTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKAAINGKVTK 442
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 443 VAYGVDHTIAL 453
>gi|195148160|ref|XP_002015042.1| GL18631 [Drosophila persimilis]
gi|194106995|gb|EDW29038.1| GL18631 [Drosophila persimilis]
Length = 458
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN+++ CG+FH G V +G L++WGK G LG GH+ F P ++ V
Sbjct: 384 FSNATTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKAAINGKVTK 442
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 443 VAYGVDHTIAL 453
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRC 97
SV++ +S S F L +G L+ WGKG GGRLG G+ + + VP L L+ +
Sbjct: 734 SVARIYSGSQ----FSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVD 789
Query: 98 IALGGVHSIALTS 110
+A+G H +ALTS
Sbjct: 790 VAVGSAHCLALTS 802
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VHSIALT 109
G+L+ WG+G GRLG G+ D FVPT L + V +ALG HS+A+T
Sbjct: 648 GELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVT 699
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFV 84
N+ +P + N V K+ + S G L ++GK++ WG+G+ G+LG G+
Sbjct: 2978 NNVPTPRQVPILNQYVVKKVAVHSG-GKHAMALTLDGKVFSWGEGEDGKLGHGNRVTLEK 3036
Query: 85 PTLNPYL-DDHVRCIALGGVHSIALTS 110
P L L +R IA G HS A+TS
Sbjct: 3037 PKLLESLRTKRIRDIACGSSHSAAITS 3063
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL--GGVHSIALT 109
+GKL+ G+G GRLG GH + P P L+ + V+ +A+ GG H++ALT
Sbjct: 2958 DGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALT 3010
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + PT + V +A+G +H +A
Sbjct: 3159 CGAQFSLALTKIGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3218
Query: 108 LT 109
+T
Sbjct: 3219 VT 3220
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLA 112
G+++ WG G+GGRLG G + VPT L+ V I G +S A++S+
Sbjct: 598 GEVYSWGAGEGGRLGHGDTASKEVPT-KIALEKQVTAIYAGASYSAAVSSVG 648
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L +G+++ WG+G+ G+LG G+ D+ P L L V IA G HS +TS
Sbjct: 4045 ALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVVDIACGSAHSACITS 4100
Score = 35.0 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G+L+ WG G+ GRLG G P L L H
Sbjct: 3052 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQGH 3098
>gi|322698668|gb|EFY90436.1| BTB domain and ankyrin repeat containing protein [Metarhizium
acridum CQMa 102]
Length = 1590
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 28 NSPNWNQLANLSVSKRFS-NSSSCGLFHSGLVVN---GKLWIWGKGDGGRLGFGHEDAAF 83
+ P+ N + L ++R + FH+ ++ + L+I G G GRLG G E+ F
Sbjct: 290 SQPDLNDIPTLVRNQRLAIRDIIMSKFHTAVLTDDPVSNLYICGVGRRGRLGLGDENTQF 349
Query: 84 --VPTLNPYLDDHVRCIALGGVHSIALT 109
VP P++D +R +ALG HS+A+T
Sbjct: 350 RFVPVQGPFIDRKIRQVALGQDHSMAVT 377
>gi|195032946|ref|XP_001988590.1| GH10494 [Drosophila grimshawi]
gi|193904590|gb|EDW03457.1| GH10494 [Drosophila grimshawi]
Length = 455
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN+++ CG+FH G V +G L++WGK G LG GH+ F P ++ V
Sbjct: 381 FSNATTVISIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKAAINGKVTK 439
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 440 VAYGVDHTIAL 450
>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1125
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G ++ VPT L DH
Sbjct: 473 AACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHGDKEQRLVPTCVAALVDH 532
Query: 95 -VRCIALGGVHSIALTS 110
R +A G ++ALT+
Sbjct: 533 NFRKVACGHSLTVALTT 549
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG H V +++ WGKG GRLG G ++ PTL L + V+ IA G +
Sbjct: 590 ACGAHHVACVTLKSEVYTWGKGANGRLGHGDQEDRNTPTLVEALKEKQVKSIACGATFTA 649
Query: 107 AL 108
A+
Sbjct: 650 AV 651
>gi|357493985|ref|XP_003617281.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355518616|gb|AET00240.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1124
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 13/76 (17%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+SCG++H+ VV GKL+ WG GD GRLG G ++A VPT ++ +
Sbjct: 496 ASCGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVALVEHN 555
Query: 95 VRCIALGGVHSIALTS 110
+A G ++ALT+
Sbjct: 556 FCQVACGHSLTVALTT 571
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANLSVS------------KRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLG 75
SP + QL N K F +CG +H L + +++ WGKG GRLG
Sbjct: 580 SPVYGQLGNPQADGKLPTRVEGKLLKSFVEEIACGAYHVAVLTLRNEVYTWGKGANGRLG 639
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D PTL L D HV+ IA G + A+
Sbjct: 640 HGDTDDRNNPTLVDALKDKHVKSIACGTNFTAAI 673
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 338 ACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDALSNTNIELVACGEYHTC 397
Query: 107 ALT 109
A+T
Sbjct: 398 AVT 400
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
S G HS V +G+L+ WG+GD GRLG G + F+PTL L D V +A G H++
Sbjct: 485 SAGYRHSAAVTSDGQLYTWGEGDHGRLGHGDCNPRFIPTLVKSLSDMPVGYVACGSTHTL 544
Query: 107 ALT 109
A +
Sbjct: 545 ACS 547
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 23 LFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAA 82
L NS N P ++ K+ S+S C L G+++ WG GD G+LG G
Sbjct: 407 LGNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWGDGDYGKLGHGDVATH 466
Query: 83 FVPTL--NPYLDDHVRCIALGGVHSIALTS 110
P L P++ + ++ G HS A+TS
Sbjct: 467 KEPKLIQGPFIGKVIELVSAGYRHSAAVTS 496
>gi|297839563|ref|XP_002887663.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
gi|297333504|gb|EFH63922.1| zinc finger protein [Arabidopsis lyrata subsp. lyrata]
Length = 1103
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRC 97
++ F SCG +H + L +++ WGKG GRLG G + VPTL L D HV+
Sbjct: 554 LASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTLVEALKDRHVKY 613
Query: 98 IALGGVHSIAL------TSLAVEECNRC-LILGEEEKR 128
IA G ++ A+ + +C+ C L G KR
Sbjct: 614 IACGSNYTAAICLHKWVSGAEQSQCSTCRLAFGFTRKR 651
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 49 SCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH- 94
SCG++H+ VV GKL+ WG GD RLG G +D PT P L D+
Sbjct: 447 SCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYN 506
Query: 95 VRCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 507 FHKIACGHSLTVGLTT 522
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL--DDHVRCIALGGVHS 105
+CG+ H+ V G+++ WG+ GGRLG G F P L L V +A G H+
Sbjct: 287 ACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHT 346
Query: 106 IALT 109
A+T
Sbjct: 347 CAVT 350
>gi|222619882|gb|EEE56014.1| hypothetical protein OsJ_04782 [Oryza sativa Japonica Group]
Length = 1093
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G +D+ FVPT L +
Sbjct: 475 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP 534
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 535 NFCQVACGHCLTVALTT 551
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 42 KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIA 99
K F SCG +H ++ + +++ WGKG GRLG G D PTL L D VR +
Sbjct: 585 KNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVV 644
Query: 100 LG 101
G
Sbjct: 645 CG 646
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + D A ++ ++ +A G H+
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTC 376
Query: 107 ALT 109
A+T
Sbjct: 377 AVT 379
>gi|57899942|dbj|BAD87854.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 1091
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G +D+ FVPT L +
Sbjct: 475 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP 534
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 535 NFCQVACGHCLTVALTT 551
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 42 KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIA 99
K F SCG +H ++ + +++ WGKG GRLG G D PTL L D VR +
Sbjct: 585 KNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVV 644
Query: 100 LG 101
G
Sbjct: 645 CG 646
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + D A ++ ++ +A G H+
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTC 376
Query: 107 ALT 109
A+T
Sbjct: 377 AVT 379
>gi|218189748|gb|EEC72175.1| hypothetical protein OsI_05225 [Oryza sativa Indica Group]
Length = 1093
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G +D+ FVPT L +
Sbjct: 475 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP 534
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 535 NFCQVACGHCLTVALTT 551
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 42 KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIA 99
K F SCG +H ++ + +++ WGKG GRLG G D PTL L D VR +
Sbjct: 585 KNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVV 644
Query: 100 LG 101
G
Sbjct: 645 CG 646
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + D A ++ ++ +A G H+
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTC 376
Query: 107 ALT 109
A+T
Sbjct: 377 AVT 379
>gi|390479661|ref|XP_002762827.2| PREDICTED: LOW QUALITY PROTEIN: X-linked retinitis pigmentosa
GTPase regulator, partial [Callithrix jacchus]
Length = 817
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHS 105
SCG +HS V +G+L+I+G+ + G+LG +E +P L P + + V +A GG HS
Sbjct: 196 SCGYYHSAFVTTDGELYIFGESENGKLGLPNELLSNHRIPQLVPEIPEKVIQVACGGEHS 255
Query: 106 IALTSLAV 113
+ LT AV
Sbjct: 256 VVLTEDAV 263
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 11/112 (9%)
Query: 5 DEELYIFSL--MAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVV-NG 61
++ +Y F L + L LF + + N ++S SCG H+ L+ NG
Sbjct: 260 EDAVYTFGLGQFGQLGLGTLLFETSEPKVVENIGNKTIS-----YISCGENHAALLTDNG 314
Query: 62 KLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVHSIALTS 110
++ +G G G+LG G E+ F PTL +L V+ +A GG H + +
Sbjct: 315 LMYTFGDGRHGKLGLGLENFTNQFTPTLCCNFLKFVVKLVACGGCHMVVFAA 366
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG HS +V N KL+++G + G+LG G + A PT L + V+ A G H++
Sbjct: 41 SCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTL 100
Query: 107 ALT 109
T
Sbjct: 101 VST 103
>gi|195118174|ref|XP_002003615.1| GI18011 [Drosophila mojavensis]
gi|193914190|gb|EDW13057.1| GI18011 [Drosophila mojavensis]
Length = 460
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN+++ CG+FH G V +G L++WGK G LG GH+ F P ++ V
Sbjct: 386 FSNATTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKAAINGKVLK 444
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 445 VAYGVDHTIAL 455
>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
Length = 1133
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G +D+ FVPT L +
Sbjct: 475 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEP 534
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 535 NFCQVACGHCLTVALTT 551
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 42 KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIA 99
K F SCG +H ++ + +++ WGKG GRLG G D PTL L D VR +
Sbjct: 585 KNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGGTDDKNTPTLVEALKDKQVRSVV 644
Query: 100 LG 101
G
Sbjct: 645 CG 646
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + D A ++ ++ +A G H+
Sbjct: 317 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDSLAHMNIELVACGEYHTC 376
Query: 107 ALT 109
A+T
Sbjct: 377 AVT 379
>gi|194853774|ref|XP_001968219.1| GG24626 [Drosophila erecta]
gi|190660086|gb|EDV57278.1| GG24626 [Drosophila erecta]
Length = 454
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN ++ CG+FH G V +G L++WGK G LG GH+ F P ++ V
Sbjct: 380 FSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKTAINGKVTK 438
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 439 VAYGVDHTIAL 449
>gi|154335100|ref|XP_001563790.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060819|emb|CAM37835.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1249
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 51 GLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDH-VRCIALGGVHSIA 107
G +HSG + +G+L+ WG G GRLG G + A+VPTL L+ H V +A G H++A
Sbjct: 816 GQWHSGAINEHGELFTWGVGYQGRLGHGSKSPAYVPTLVRGALEGHRVVDVACGSFHTVA 875
Query: 108 LTSLAVEEC 116
LT+ C
Sbjct: 876 LTAAGAVFC 884
>gi|298710339|emb|CBJ31957.1| guanyl nucleotide exchange factor [Ectocarpus siliculosus]
Length = 622
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-------DDHVRCIAL 100
SCG H+ V +G L+IWG GDGGRLG G E P P L + ++
Sbjct: 219 SCGAAHTACVTASGHLFIWGCGDGGRLGLGEERLG--PQYEPVLVESLATGGQRIGAVSC 276
Query: 101 GGVHSIALTSLAVEECNRCLILGEEEKR 128
G H++ALT AV E + GE E R
Sbjct: 277 GNSHTLALT--AVREAHE----GEGEGR 298
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 14/79 (17%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G +++ VPT LD+
Sbjct: 469 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEP 528
Query: 95 VRC-IALGGVHSIALTSLA 112
C +A G ++AL+ L
Sbjct: 529 NFCQVACGHSMTVALSRLG 547
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 40 VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRC 97
+SK F +CG +H ++ + +++ WGKG G LG G + PTL L D V+
Sbjct: 577 LSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNTPTLVEALKDKQVKS 636
Query: 98 IALGGVHSIAL 108
IA G + A+
Sbjct: 637 IACGTNFTAAI 647
>gi|24580714|ref|NP_608550.1| CG3862 [Drosophila melanogaster]
gi|7296158|gb|AAF51451.1| CG3862 [Drosophila melanogaster]
Length = 454
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN ++ CG+FH G V +G L++WGK G LG GH+ F P ++ V
Sbjct: 380 FSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKAAINGKVTK 438
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 439 VAYGVDHTIAL 449
>gi|408681154|ref|YP_006880981.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
gi|328885483|emb|CCA58722.1| RCC1 repeat domain protein [Streptomyces venezuelae ATCC 10712]
Length = 394
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 53 FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLA 112
F L +G +W WGKGD GRLG G+ P P L D V +A+G H +ALT+
Sbjct: 187 FSVALRQDGTVWTWGKGDNGRLGTGNNTTRETPQKVPDLAD-VESVAVGCEHVLALTADG 245
Query: 113 V 113
V
Sbjct: 246 V 246
>gi|162944936|gb|ABY20537.1| RH09889p [Drosophila melanogaster]
Length = 462
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN ++ CG+FH G V +G L++WGK G LG GH+ F P ++ V
Sbjct: 388 FSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKAAINGKVTK 446
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 447 VAYGVDHTIAL 457
>gi|301107029|ref|XP_002902597.1| regulator of chromosome condensation (RCC1), putative [Phytophthora
infestans T30-4]
gi|262098471|gb|EEY56523.1| regulator of chromosome condensation (RCC1), putative [Phytophthora
infestans T30-4]
Length = 731
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 42 KRFSNSSSCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHE--DAAFVPTL-NPYLDDHVRC 97
KR S SCG H+G V G+L++WG +GGRLG G D VPTL + +R
Sbjct: 289 KRTIRSVSCGPSHTGAVSTAGELFMWGSANGGRLGLGQHMNDTVVVPTLVRELVKKRIRV 348
Query: 98 --IALGGVHSIALTSLAVEEC 116
++ G HS AL + EC
Sbjct: 349 WQVSCGTAHS-ALCTEVTSEC 368
>gi|383861352|ref|XP_003706150.1| PREDICTED: uncharacterized protein LOC100881287 [Megachile rotundata]
Length = 1884
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIAL 108
G +HS L +G+++ WG G G+LG G+ D VPTL L +R I+ G H++AL
Sbjct: 932 GQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKIVPTLITSLLGTVIRYISAGHAHTLAL 991
Query: 109 TSLAVEECNRCLILGE 124
++ + C I G+
Sbjct: 992 STEGIVYAFGCNIFGQ 1007
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGG-VHS 105
S SCG H+ V N ++ WG G+LG G P L YL V A+ G HS
Sbjct: 877 SVSCGHCHTLAVTNNGVYAWGSSRFGQLGLGKILQCSTPELITYLAQEVIIDAVAGQYHS 936
Query: 106 IALTS 110
+ALT+
Sbjct: 937 VALTA 941
>gi|195470358|ref|XP_002087475.1| GE15898 [Drosophila yakuba]
gi|194173576|gb|EDW87187.1| GE15898 [Drosophila yakuba]
Length = 454
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN ++ CG+FH G V +G L++WGK G LG GH+ F P ++ V
Sbjct: 380 FSNETTVVSIGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKTAINGKVTK 438
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 439 VAYGVDHTIAL 449
>gi|195350203|ref|XP_002041631.1| GM16641 [Drosophila sechellia]
gi|194123404|gb|EDW45447.1| GM16641 [Drosophila sechellia]
Length = 434
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 48 SSCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSI 106
S CG+FH G V +G L++WGK G LG GH+ F P ++ V +A G H+I
Sbjct: 369 SGCGVFHMGAVNSDGDLFMWGKNRFGHLGLGHKKDQFFP-FKAAINGKVTKVAYGVDHTI 427
Query: 107 AL 108
AL
Sbjct: 428 AL 429
>gi|325179570|emb|CCA13968.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 530
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSI 106
SCG+ H+G+V + G ++ WG GDGGRLG G+ + P + L + + IA H++
Sbjct: 341 SCGVMHAGIVCMKGHVYTWGSGDGGRLGHGNNISHSKPKIVEELRNDIMVDIACAVWHTV 400
Query: 107 ALT 109
ALT
Sbjct: 401 ALT 403
>gi|407838156|gb|EKF99968.1| hypothetical protein TCSYLVIO_009110 [Trypanosoma cruzi]
Length = 644
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 51 GLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPT--LNPYLDDHVRCIALGGVHSIA 107
G +HSG++ G+L+ WG G GRLG G ++ A VPT HV +A G H++A
Sbjct: 383 GQWHSGVINTAGELFTWGVGYQGRLGHGDKEPALVPTKVRGALTGQHVIDVACGSFHTVA 442
Query: 108 LTSLAVEEC 116
LT C
Sbjct: 443 LTERGAVYC 451
>gi|2829910|gb|AAC00618.1| Unknown protein, contains regulator of chromosome condensation
motifs [Arabidopsis thaliana]
Length = 1108
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRC 97
++ F SCG +H + L +++ WGKG GRLG G + VPT+ L D HV+
Sbjct: 559 LASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKY 618
Query: 98 IALGGVHSIAL------TSLAVEECNRC-LILGEEEKR 128
IA G ++ A+ + +C+ C L G KR
Sbjct: 619 IACGSNYTAAICLHKWVSGAEQSQCSTCRLAFGFTRKR 656
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 49 SCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH- 94
SCG++H+ VV GKL+ WG GD RLG G +D PT P L D+
Sbjct: 452 SCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYN 511
Query: 95 VRCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 512 FHKIACGHSLTVGLTT 527
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL--DDHVRCIALGGVHS 105
+CG+ H+ V G+++ WG+ GGRLG G F P L L V +A G H+
Sbjct: 292 ACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHT 351
Query: 106 IALT 109
A+T
Sbjct: 352 CAVT 355
>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 456
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 50 CGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG FH+ L +G++W WG G+ GRLG G D VP + + D+V IA G S A
Sbjct: 229 CGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFA 288
Query: 108 LT 109
LT
Sbjct: 289 LT 290
>gi|398013382|ref|XP_003859883.1| hypothetical protein, conserved [Leishmania donovani]
gi|322498101|emb|CBZ33176.1| hypothetical protein, conserved [Leishmania donovani]
Length = 1172
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 51 GLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDH-VRCIALGGVHSIA 107
G +HSG + +G+L+ WG G GRLG G + A+VPTL L+ H V +A G H++A
Sbjct: 727 GQWHSGAINEHGELFTWGVGYQGRLGHGSKAPAYVPTLVRGALEGHRVVDVACGSFHTVA 786
Query: 108 LTSLAVEEC 116
LT+ C
Sbjct: 787 LTAAGAVFC 795
>gi|401418791|ref|XP_003873886.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490119|emb|CBZ25380.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1168
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 51 GLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDH-VRCIALGGVHSIA 107
G +HSG + +G+L+ WG G GRLG G + A+VPTL L+ H V +A G H++A
Sbjct: 728 GQWHSGAINEHGELFTWGVGYQGRLGHGSKAPAYVPTLVRGALEGHRVVDVACGSFHTVA 787
Query: 108 LTSLAVEEC 116
LT+ C
Sbjct: 788 LTAAGAVFC 796
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G +D VPT L +
Sbjct: 519 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 578
Query: 95 VRC-IALGGVHSIALTS 110
C IA G ++ALT+
Sbjct: 579 NFCQIACGHCMTVALTT 595
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 29 SPNWNQLANLS------------VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N + K F SCG +H ++ + +++ WGKG GRLG
Sbjct: 604 SPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 663
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALG 101
G D PTL L D VR + G
Sbjct: 664 HGDTDDRSSPTLVESLKDKQVRTVVCG 690
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKG--DGGRLGFGHEDAAFVPTL--NPYLDDHVRCIALGGV 103
+CG +H+ + ++G L+ WG G + G LG G+E + +VP P HV I+ G
Sbjct: 413 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPW 472
Query: 104 HSIALTS 110
H+ +TS
Sbjct: 473 HTAIVTS 479
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 361 SCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTC 420
Query: 107 ALT 109
A+T
Sbjct: 421 AVT 423
>gi|146083222|ref|XP_001464682.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134068776|emb|CAM59710.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 1172
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 51 GLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDH-VRCIALGGVHSIA 107
G +HSG + +G+L+ WG G GRLG G + A+VPTL L+ H V +A G H++A
Sbjct: 727 GQWHSGAINEHGELFTWGVGYQGRLGHGSKAPAYVPTLVRGALEGHRVVDVACGSFHTVA 786
Query: 108 LTSLAVEEC 116
LT+ C
Sbjct: 787 LTAAGAVFC 795
>gi|157867448|ref|XP_001682278.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68125731|emb|CAJ03462.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 1142
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 51 GLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDH-VRCIALGGVHSIA 107
G +HSG + +G+L+ WG G GRLG G + A+VPTL L+ H V +A G H++A
Sbjct: 727 GQWHSGAINEHGELFTWGVGYQGRLGHGSKAPAYVPTLVRGALEGHRVVDVACGSFHTVA 786
Query: 108 LTSLAVEEC 116
LT+ C
Sbjct: 787 LTAAGAVFC 795
>gi|18411298|ref|NP_565144.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940.1| zinc finger protein [Arabidopsis thaliana]
gi|332197787|gb|AEE35908.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1103
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRC 97
++ F SCG +H + L +++ WGKG GRLG G + VPT+ L D HV+
Sbjct: 554 LASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKY 613
Query: 98 IALGGVHSIAL------TSLAVEECNRC-LILGEEEKR 128
IA G ++ A+ + +C+ C L G KR
Sbjct: 614 IACGSNYTAAICLHKWVSGAEQSQCSTCRLAFGFTRKR 651
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 49 SCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH- 94
SCG++H+ VV GKL+ WG GD RLG G +D PT P L D+
Sbjct: 447 SCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYN 506
Query: 95 VRCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 507 FHKIACGHSLTVGLTT 522
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL--DDHVRCIALGGVHS 105
+CG+ H+ V G+++ WG+ GGRLG G F P L L V +A G H+
Sbjct: 287 ACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHT 346
Query: 106 IALT 109
A+T
Sbjct: 347 CAVT 350
>gi|195388414|ref|XP_002052875.1| GJ19641 [Drosophila virilis]
gi|194149332|gb|EDW65030.1| GJ19641 [Drosophila virilis]
Length = 455
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 44 FSNSSS-----CGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
FSN+++ CG+FH G + +G L++WGK G LG GH+ F P ++ V
Sbjct: 381 FSNATTVVSIGCGVFHMGAINSDGDLFMWGKNRFGHLGVGHKKDQFFP-FKAAINGKVLK 439
Query: 98 IALGGVHSIAL 108
+A G H+IAL
Sbjct: 440 VAYGVDHTIAL 450
>gi|18087541|gb|AAL58903.1|AF462811_1 At1g76950/F22K20_5 [Arabidopsis thaliana]
gi|27363446|gb|AAO11642.1| At1g76950/F22K20_5 [Arabidopsis thaliana]
Length = 1103
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRC 97
++ F SCG +H + L +++ WGKG GRLG G + VPT+ L D HV+
Sbjct: 554 LASEFVEEISCGAYHVAALTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKY 613
Query: 98 IALGGVHSIAL------TSLAVEECNRC-LILGEEEKR 128
IA G ++ A+ + +C+ C L G KR
Sbjct: 614 IACGSNYTAAICLHKWVSGAEQSQCSTCRLAFGFTRKR 651
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 14/76 (18%)
Query: 49 SCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH- 94
SCG++H+ VV GKL+ WG GD RLG G +D PT P L D+
Sbjct: 447 SCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYN 506
Query: 95 VRCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 507 FHKIACGHSLTVGLTT 522
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL--DDHVRCIALGGVHS 105
+CG+ H+ V G+++ WG+ GGRLG G F P L L V +A G H+
Sbjct: 287 ACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFHT 346
Query: 106 IALT 109
A+T
Sbjct: 347 CAVT 350
>gi|145540984|ref|XP_001456181.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423991|emb|CAK88784.1| unnamed protein product [Paramecium tetraurelia]
Length = 1005
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 50 CGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
CG H+ +V +L++WG+GDGG+LG E + ++V+ +A G H+I L
Sbjct: 783 CGGLHNAAIVEDRLYVWGRGDGGQLGLPLELGMEIAIPTKVEVENVQAVACGDAHTIILN 842
Query: 110 S 110
S
Sbjct: 843 S 843
>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 49 SCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
+CG++H+ VV GKL+ WG GD GRLG G ++A VPT L +
Sbjct: 436 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATLVEPS 495
Query: 96 RC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 496 FCQVACGHSLTVALTT 511
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANLSVS------------KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N K F +CG +H ++ + +++ WGKG GRLG
Sbjct: 520 SPVYGQLGNPQADGKVPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 579
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D P++ L D V+ I G + A+
Sbjct: 580 HGDTDDRNFPSIVEALKDKQVKGIICGTSFTAAI 613
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 33 NQLANLSVSKRFSNSS-------SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFV 84
+Q A++++ + N S S G HS L ++G ++ WG+ D G+LG GH D
Sbjct: 292 SQFASIAIPQIVENLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDF 351
Query: 85 PTLNPYLDDH-VRCIALGGVHSIALT 109
P+L LD+ V +A GG H+ LT
Sbjct: 352 PSLIEALDNQKVEFLACGGSHTALLT 377
>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
Length = 1090
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 13/74 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ VV +GKL+ WG GD GRLG G ++ VPT L D+
Sbjct: 472 ACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGDGDKGRLGHGDKEQKLVPTCVAALVDYNF 531
Query: 96 RCIALGGVHSIALT 109
+ +A G ++ALT
Sbjct: 532 KQVACGHTLTVALT 545
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
+CG H+ LV G+++ WG GGRLG G + D A + + +A G HS
Sbjct: 313 ACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKLVEALATTNTEFVACGEYHSC 372
Query: 107 ALT 109
A+T
Sbjct: 373 AVT 375
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 44 FSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALG 101
F +CG +H L +++ WGKG GRLG G PTL L + V+ +A G
Sbjct: 582 FVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMDRNTPTLVEALKEKQVKSVACG 641
Query: 102 GVHSIAL 108
+ A+
Sbjct: 642 SGFTAAI 648
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G +D VPT L +
Sbjct: 520 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 579
Query: 95 VRC-IALGGVHSIALTS 110
C IA G ++ALT+
Sbjct: 580 NFCQIACGHCMTVALTT 596
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 29 SPNWNQLANLSVS------------KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N K F SCG +H ++ + +++ WGKG GRLG
Sbjct: 605 SPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 664
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALG 101
G D PTL L D VR + G
Sbjct: 665 HGDTDDRSSPTLVEALKDKQVRTVVCG 691
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKG--DGGRLGFGHEDAAFVPTL--NPYLDDHVRCIALGGV 103
+CG +H+ + ++G L+ WG G + G LG G+E + +VP P HV I+ G
Sbjct: 414 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPW 473
Query: 104 HSIALTS 110
H+ +TS
Sbjct: 474 HTAIVTS 480
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 362 SCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTC 421
Query: 107 ALT 109
A+T
Sbjct: 422 AVT 424
>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
distachyon]
Length = 1090
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVV-------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV +GK++ WG GD GRLG G +D VPT L +
Sbjct: 475 AACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVASLVEP 534
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 535 NFCQVACGHCFTVALTT 551
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 42 KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIA 99
K F SCG +H ++ + +++ WGKG GRLG G D PTL L D VR +
Sbjct: 585 KNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVV 644
Query: 100 LG 101
G
Sbjct: 645 CG 646
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + P L L ++ +A G H+
Sbjct: 317 SCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLVEALAHMNIELVACGEYHTC 376
Query: 107 ALT 109
A+T
Sbjct: 377 AVT 379
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G +D VPT L +
Sbjct: 474 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 533
Query: 95 VRC-IALGGVHSIALTS 110
C IA G ++ALT+
Sbjct: 534 NFCQIACGHCMTVALTT 550
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 29 SPNWNQLANLSVS------------KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N K F SCG +H ++ + +++ WGKG GRLG
Sbjct: 559 SPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 618
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALG 101
G D PTL L D VR + G
Sbjct: 619 HGDTDDRSSPTLVEALKDKQVRTVVCG 645
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKG--DGGRLGFGHEDAAFVPTL--NPYLDDHVRCIALGGV 103
+CG +H+ + ++G L+ WG G + G LG G+E + +VP P HV I+ G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPW 427
Query: 104 HSIALTS 110
H+ +TS
Sbjct: 428 HTAIVTS 434
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 316 SCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTC 375
Query: 107 ALT 109
A+T
Sbjct: 376 AVT 378
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD 92
++L +++V K F S F + L +G+++ WGKGD RLG G E+ P + L
Sbjct: 721 DKLLDINVVKVFCGSQ----FSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLR 776
Query: 93 DH-VRCIALGGVHSIALT 109
D V+ +++G H +ALT
Sbjct: 777 DRKVKDLSVGTTHILALT 794
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG + + L NG+L+ WG+G+ GRLG G+ D PTL L H
Sbjct: 626 ACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGH 672
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G++ PTL L + +A+G +H +A
Sbjct: 3264 CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 3323
Query: 108 LT 109
+T
Sbjct: 3324 VT 3325
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHS 105
S + G + L +G ++ WG GDGGRLG G + P L L+ ++ IA G +S
Sbjct: 573 SHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEALLEKNIIFIACGSTYS 632
Query: 106 IALTS 110
AL++
Sbjct: 633 AALSA 637
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G L+ WGKG GRLG G D P + L D+
Sbjct: 4139 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 4185
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV----RCIALGGVHSIALTS 110
+ +GK++ G G GRLG G D+ +PTL + HV ++ GG H IAL+S
Sbjct: 4041 AVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESI-QHVFIKKVAVSSGGKHCIALSS 4098
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 48 SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSI 106
SS G L G ++ WG+GD G+LG G++ + P L L + IA GG HS
Sbjct: 4087 SSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSA 4146
Query: 107 ALTS 110
A+TS
Sbjct: 4147 AITS 4150
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIAL--GGVHSIALT 109
GKL+ G+G GRLG G ++ P P+L V + +A+ GG H++ALT
Sbjct: 3064 GKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALT 3115
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
L +G ++ WG GD G+LG G D + P L L++ V C G S+ALT
Sbjct: 3219 ALTTDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVEC---GAQFSLALT 3273
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 41 SKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCI 98
SKR + + CG HS + NG+L+ WG G+ GRLG G P L L H V +
Sbjct: 3150 SKRIRDIA-CGSGHSAAIASNGELYTWGLGEYGRLGHGDTITQTRPKLVQALIGHRVVQV 3208
Query: 99 ALGG--VHSIALTS 110
A G ++ALT+
Sbjct: 3209 ACGSRDAQTMALTT 3222
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
HSG L +GK++ WG+G+ G+LG G+ + P L L +R IA G HS
Sbjct: 3105 HSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSA 3164
Query: 107 ALTS 110
A+ S
Sbjct: 3165 AIAS 3168
>gi|281205292|gb|EFA79484.1| ankyrin repeat-containing protein [Polysphondylium pallidum PN500]
Length = 903
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 30 PNWNQLANLSVSKRFSNSS----SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFV 84
P N ++ S+ F N +CG HS L G ++ WG G GGRLG G+ + +
Sbjct: 243 PTKNDISIPSMISAFKNKQITQIACGKDHSLALDEIGVVYAWGNGSGGRLGLGNSEVVSI 302
Query: 85 PTLNPYLDDH-VRCIALGGVHSIALT 109
P + P+ +D + IA G S+AL+
Sbjct: 303 PKIIPHFEDEKITSIACGQEFSLALS 328
>gi|348666178|gb|EGZ06006.1| hypothetical protein PHYSODRAFT_533148 [Phytophthora sojae]
Length = 429
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 50 CGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG FH+ L +G++W WG G+ GRLG G D VP + + D+V IA G S A
Sbjct: 202 CGEFHTVALSKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVSIAAGRDFSFA 261
Query: 108 LT 109
LT
Sbjct: 262 LT 263
>gi|403263569|ref|XP_003924096.1| PREDICTED: uncharacterized protein LOC101049856 [Saimiri
boliviensis boliviensis]
Length = 1170
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE + N V + + SCG +HS V +G+L+I+G+ +
Sbjct: 160 RLFMWGDNSEGQIGLPDMPNACVPHQVTTGKPVSWISCGYYHSAFVTTDGELYIFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
G+LG +E +P L P + + V +A GG HS+ LT
Sbjct: 220 GKLGLPYELLSNHRIPQLVPEIPEKVIQVACGGEHSVVLT 259
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG HS +V N KL+++G + G+LG G + A PT L + V+ A G H++
Sbjct: 41 SCGDEHSAVVTGNNKLYVFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTL 100
Query: 107 ALT 109
T
Sbjct: 101 VST 103
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 53 FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTSL 111
+H+ L G+++ WGKGDG RLG G+ ++ +P L L + ++LG H IAL+S
Sbjct: 685 WHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSE 744
Query: 112 AV 113
V
Sbjct: 745 GV 746
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIAL--GGVHSIALTS 110
+GKL+ G+G GRLG GH + P NPYL VR +A+ GG H++ALT+
Sbjct: 3108 DGKLFACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTA 3161
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G++W WGKGD RLG G + PTL L V +A+G +H +A
Sbjct: 3309 CGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLA 3368
Query: 108 LTS 110
+TS
Sbjct: 3369 VTS 3371
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L +G+++ WG+G+ G+LG G+ + P L L V CIA GG HS LT+
Sbjct: 4052 ALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTA 4107
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVH 104
S +CG HS V G L+ WG G+ GRLG G ++ VP + L ++ V +A G
Sbjct: 3200 SIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQVACG--- 3256
Query: 105 SIALTSLAVEECNRCLILGE 124
S +LA+ C + G+
Sbjct: 3257 SRDAQTLALTACGKVFSWGD 3276
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG HS L G+++ WGKG GRLG G + +P L
Sbjct: 4096 ACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKL 4135
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFV 84
N+ ++P N + + +R + S G L +GK++ WG+G+ G+LG G+
Sbjct: 3128 NNVSTPRANPYLSHVLVRRVAVHSG-GKHALALTADGKVYSWGEGEDGKLGHGNRITLEA 3186
Query: 85 PTLNPYL-DDHVRCIALGGVHSIALTS 110
P L L + V IA G HS +T+
Sbjct: 3187 PRLIESLAGERVISIACGSAHSACVTA 3213
>gi|356576039|ref|XP_003556142.1| PREDICTED: uncharacterized protein LOC100811999 [Glycine max]
Length = 1098
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHV 95
+CG++H+ ++ +GKL+ WG GD RLG G +DA PT P L +D+
Sbjct: 444 ACGVWHTAAIIEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKDARLEPTCVPSLIEDNF 503
Query: 96 RCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 504 HRIACGHSLTVGLTT 518
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H L +++ WGKG GRLG G + PTL L D HV+ IA G +S
Sbjct: 559 ACGAYHVAVLTSKNEVFTWGKGANGRLGHGDVEDRKSPTLVEALKDRHVKYIACGSNYSS 618
Query: 107 AL 108
A+
Sbjct: 619 AI 620
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSI 106
+CG+ H+ LV G+L+ WG+ GGRLG G P L V +A G H+
Sbjct: 285 ACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVVQPRLVEAMASTTVDFVACGEFHTC 344
Query: 107 ALT 109
A+T
Sbjct: 345 AVT 347
>gi|348681821|gb|EGZ21637.1| hypothetical protein PHYSODRAFT_313731 [Phytophthora sojae]
Length = 817
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 42 KRFSNSSSCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHE--DAAFVPTL-NPYLDDHVRC 97
KR S SCG HSG V G+L++WG +GGRLG G D VPTL ++ VR
Sbjct: 293 KRKIRSVSCGASHSGAVSTAGELFMWGSANGGRLGLGPHVIDTIVVPTLVRDLVNRKVRV 352
Query: 98 --IALGGVHSIALTSLAVE 114
++ G HS T + E
Sbjct: 353 WQVSCGTAHSAICTEVTSE 371
>gi|348681462|gb|EGZ21278.1| hypothetical protein PHYSODRAFT_491910 [Phytophthora sojae]
Length = 687
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG H+GLV +G+ + WG GDGGRLG G + P L L D + IA H++
Sbjct: 361 SCGAMHAGLVTTDGQAYTWGSGDGGRLGHGDNTSYVNPKLVEALKTDVIVEIACACWHTV 420
Query: 107 AL 108
A+
Sbjct: 421 AV 422
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G +D VPT L +
Sbjct: 474 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCVAALVEP 533
Query: 95 VRC-IALGGVHSIALTS 110
C IA G ++ALT+
Sbjct: 534 NFCQIACGHCMTVALTT 550
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 29 SPNWNQLANLSVS------------KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N K F SCG +H ++ + +++ WGKG GRLG
Sbjct: 559 SPVYGQLGNPQADGMLPVRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLG 618
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALG 101
G D PTL L D VR + G
Sbjct: 619 HGDTDDRSSPTLVEALKDKQVRTVVCG 645
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKG--DGGRLGFGHEDAAFVPTL--NPYLDDHVRCIALGGV 103
+CG +H+ + ++G L+ WG G + G LG G+E + +VP P HV I+ G
Sbjct: 368 ACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIHVSAISCGPW 427
Query: 104 HSIALTS 110
H+ +TS
Sbjct: 428 HTAIVTS 434
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 316 SCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALANMNIELVACGEYHTC 375
Query: 107 ALT 109
A+T
Sbjct: 376 AVT 378
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
LA+ V+ F SS + + + +G+L+ WG+G GRLG G+ + +VPTL L H
Sbjct: 658 LADRQVTGVFCGSS----YSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAH 713
Query: 95 -VRCIAL--GGVHSIALT 109
V +AL G HS+ +T
Sbjct: 714 RVVHVALGCGDAHSLCVT 731
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCI 98
V K FS S F L G ++ WGKG GGRLG G+ + + VP + L+ + +
Sbjct: 769 VVKVFSGSQ----FSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVDL 824
Query: 99 ALGGVHSIALTS 110
A+G H +ALT+
Sbjct: 825 AVGLAHCLALTA 836
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 23 LFNSENSPNWNQLANLS--VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHED 80
L ++ N P Q+ LS V K+ + S G L ++GK++ WG+G+ G+LG G+
Sbjct: 3095 LGHNNNVPTPKQVPILSQYVVKKVAVHSG-GKHAMALTLDGKVFSWGEGEDGKLGHGNRL 3153
Query: 81 AAFVPTLNPYL-DDHVRCIALGGVHSIALTS 110
P L L +R IA G HS A+TS
Sbjct: 3154 TLEKPKLIETLRTKRIRDIACGSSHSAAITS 3184
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIALTS 110
L +G ++ WG GDGGRLG G A +PT + D V + G +S A+T+
Sbjct: 623 ALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSSYSAAITA 678
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL--GGVHSIALT 109
+GKL+ G+G GRLG GH + P P L + V+ +A+ GG H++ALT
Sbjct: 3079 DGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALT 3131
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + PT + V +A+G +H +A
Sbjct: 3280 CGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3339
Query: 108 LT 109
+T
Sbjct: 3340 VT 3341
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G+L+ WG G+ GRLG G P L L DH
Sbjct: 3173 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDH 3219
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 35 LANLSVSKRFSNSSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD- 92
LA L V+K CG F L +G ++ WGKGD RLG G+ D P L
Sbjct: 4331 LAGLGVTK-----VECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQG 4385
Query: 93 DHVRCIALGGVHSIALT 109
+ IA G +H +A +
Sbjct: 4386 KKIISIATGSLHCVACS 4402
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 19/110 (17%)
Query: 18 ALVVRLFNSEN-----SPNWNQLANLS------------VSKRFSNSSSCGLFHSGLVVN 60
+L V L NS + SP + QL N +SK F +CG +H ++ +
Sbjct: 541 SLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTS 600
Query: 61 -GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
+++ WGKG GRLG G D PTL L D V+ IA G + A+
Sbjct: 601 RTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G ++A VPT L +
Sbjct: 472 AACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP 531
Query: 95 VRC-IALGGVHSIALT 109
C +A G ++ALT
Sbjct: 532 NFCQVACGHSLTVALT 547
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + A P L L + ++ +A G H+
Sbjct: 314 ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTC 373
Query: 107 ALT 109
A+T
Sbjct: 374 AVT 376
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 46 NSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP 85
+S SCG +H+ LV + GKL+ +G G G LG G D+ +P
Sbjct: 418 SSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIP 458
>gi|345323514|ref|XP_003430715.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Ornithorhynchus anatinus]
Length = 806
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDHVRCIALGGVHS 105
SCG +HS LV +G+L+ +G+ + G+LG E +P L P + V +A GG H+
Sbjct: 282 SCGYYHSALVTTDGELYTFGEPENGKLGLSSEQLKNHRIPQLVPGISGKVNQVACGGGHT 341
Query: 106 IALT 109
+ALT
Sbjct: 342 VALT 345
Score = 40.4 bits (93), Expect = 0.20, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V +A GG H
Sbjct: 387 ACGENHTALISDTGLMYTFGDGRHGKLGLGEENFTNQFIPTLCSNFLRFSVHLVACGGCH 446
Query: 105 SIALT--------SLAVEECNRC 119
+ +AVEE + C
Sbjct: 447 MLVFAIPRLKGSEEIAVEEFSEC 469
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 19/110 (17%)
Query: 18 ALVVRLFNSEN-----SPNWNQLANLS------------VSKRFSNSSSCGLFHSGLVVN 60
+L V L NS + SP + QL N +SK F +CG +H ++ +
Sbjct: 541 SLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPARVEGKLSKSFVEELACGAYHVAVLTS 600
Query: 61 -GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
+++ WGKG GRLG G D PTL L D V+ IA G + A+
Sbjct: 601 RTEVYTWGKGANGRLGHGSTDDRNTPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 45.4 bits (106), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 14/76 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G ++A VPT L +
Sbjct: 472 AACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEP 531
Query: 95 VRC-IALGGVHSIALT 109
C +A G ++ALT
Sbjct: 532 NFCQVACGHSLTVALT 547
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + A P L L + ++ +A G H+
Sbjct: 314 ACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALSNLNIELVACGEYHTC 373
Query: 107 ALT 109
A+T
Sbjct: 374 AVT 376
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 46 NSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP 85
+S SCG +H+ LV + GKL+ +G G G LG G D+ +P
Sbjct: 418 SSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIP 458
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL- 91
++L +++V K F G F + L +G+++ WGKGD RLG G E+ P + L
Sbjct: 300 DKLLDINVVKVFCG----GQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLR 355
Query: 92 DDHVRCIALGGVHSIALT 109
D ++ +++G H +ALT
Sbjct: 356 DKKIKDLSVGTTHILALT 373
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG + + L +G+L+ WG+G+ GRLG G+ D PTL L H
Sbjct: 205 ACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGH 251
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G++ PTL L + +A+G +H +A
Sbjct: 2841 CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 2900
Query: 108 LT 109
+T
Sbjct: 2901 VT 2902
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHS 105
S + G + L +G ++ WG GDGGRLG G + P L LD ++ IA G +S
Sbjct: 152 SHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIESLLDKNIVFIACGSTYS 211
Query: 106 IALTS 110
AL++
Sbjct: 212 AALSA 216
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIAL--GGVHSIALT 109
GKL+ G+G GRLG G ++ P P+L V + +A+ GG H++ALT
Sbjct: 2641 GKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALT 2692
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
HSG L +GK++ WG+G+ G+LG G+ + P L L +R IA G HS
Sbjct: 2682 HSGGKHALALTQDGKVFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSA 2741
Query: 107 ALTS 110
A+ S
Sbjct: 2742 AIAS 2745
>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1100
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G ++A VPT L +
Sbjct: 468 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 527
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 528 NFCQVACGHSLTVALTT 544
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANLS------------VSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLG 75
SP + QL N +SK F +CG +H L +++ WGKG GRLG
Sbjct: 553 SPVYGQLGNPQADGKLPNRVEGRLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLG 612
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D P+L L D V+ IA G + A+
Sbjct: 613 HGDTDDRNFPSLVEALKDKQVKSIACGTNFTAAI 646
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 310 ACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIDSLSNINIELVACGEYHTC 369
Query: 107 ALT 109
A+T
Sbjct: 370 AVT 372
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
+CG + + L NG+L+ WG+G+ GRLG G+ D +PTL L+ H+
Sbjct: 563 ACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHM 610
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD 92
++L +++V+K + G F + L G+++ WGKG+ RLG G+ED P + L
Sbjct: 658 DKLLDINVAKVYCG----GQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILK 713
Query: 93 -DHVRCIALGGVHSIALT 109
V+ + +G +H +ALT
Sbjct: 714 TKKVKELCVGNLHVLALT 731
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G++ PTL L V +A+G +H +A
Sbjct: 3186 CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLA 3245
Query: 108 LTSLA 112
+T +
Sbjct: 3246 VTDIG 3250
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
HSG L +GK++ WG+G+ G+LG G+ + P L L +R IA G HS
Sbjct: 3027 HSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSA 3086
Query: 107 ALTS 110
A+TS
Sbjct: 3087 AITS 3090
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHS 105
S S G + L + ++ WG GDGGRLG G P L ++ ++ IA G +S
Sbjct: 510 SHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEALVEKNITFIACGSTYS 569
Query: 106 IALTS 110
AL+S
Sbjct: 570 AALSS 574
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G L+ WGKG GRLG G + P L L D+
Sbjct: 4098 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDY 4144
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIALTS 110
L G ++ WG+GD G+LG G+ + P L L + IA GG HS A+TS
Sbjct: 4054 ALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITS 4109
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 35 LANLSVSKRFSNSSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD- 92
LA L V K CG F L +G ++ WGKGD RLG G +D P L
Sbjct: 4195 LAGLGVVK-----VECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG 4249
Query: 93 DHVRCIALGGVHSIALT 109
+ IA G +H +A T
Sbjct: 4250 KKIISIATGSLHCVACT 4266
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEECNRCL 120
GKL+ G+G GRLG G + P P+L +V I VHS +LA+ + +
Sbjct: 2986 GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYV--IKKVSVHSGGKHALALTQDGKVF 3043
Query: 121 ILGEEEKRRL 130
GE E +L
Sbjct: 3044 SWGEGEDGKL 3053
Score = 35.4 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIAL--GGVHSIALTS 110
+ +GK++ G G GRLG G D+ VPTL + V+ +A+ GG H +AL+S
Sbjct: 4000 AVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS 4057
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG FHS V G +++WGK D G LG G +P Y DD V ++ GG H++
Sbjct: 229 ACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCGGWHTV 288
Query: 107 ALTSLAVEECNRCLILGEEEKRRL 130
V + C G E RL
Sbjct: 289 -----VVAKSGDCYAFGRGEYGRL 307
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH------EDAAFVPTLNPYL-----DDHVR 96
SCG H+ + + G++++WG+GD G+LG G E+ + + P+L + V
Sbjct: 167 SCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVV 226
Query: 97 CIALGGVHSIALT 109
+A G HS A+T
Sbjct: 227 QVACGAFHSAAVT 239
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 48 SSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSI 106
++CG H+ V +G ++ G+ D GRLG A VPT VR + GG HS+
Sbjct: 332 AACGGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLDLGPIPVRQFSAGGAHSV 391
Query: 107 AL 108
AL
Sbjct: 392 AL 393
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAF--VPTLNPYLD----DHVRCIAL 100
SCG HS V +G L++WG+ G+LG E +AA +P P + + + ++
Sbjct: 109 SCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSC 168
Query: 101 GGVHSIALTSLA 112
GG H+ ALTS
Sbjct: 169 GGTHTAALTSFG 180
>gi|326436402|gb|EGD81972.1| hypothetical protein PTSG_02656 [Salpingoeca sp. ATCC 50818]
Length = 5125
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CG HS V G+L++WG GRLG G ++ + PTL P L V+ +A G H++
Sbjct: 3202 ACGRRHSAAVTATGQLYMWGCNHHGRLGLGDQNDRYEPTLVPNLPP-VQMVACGDRHTLV 3260
Query: 108 LT 109
LT
Sbjct: 3261 LT 3262
>gi|405970894|gb|EKC35758.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Crassostrea gigas]
Length = 1288
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 35/94 (37%), Positives = 44/94 (46%), Gaps = 15/94 (15%)
Query: 33 NQLANLSVSKRFSNS-----SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
N AN V KR S G H G+V NG+L+ WGK GRL GH D A T+
Sbjct: 684 NAQANQPVQKRRRLSFQPRPVGTGPQHVGVVRNGELYTWGKTSQGRL--GHGDLALENTV 741
Query: 88 NP--------YLDDHVRCIALGGVHSIALTSLAV 113
+P L V ++ GG H++ALT V
Sbjct: 742 SPPCRVETLHMLQIKVLSVSCGGEHTVALTQQGV 775
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 23 LFNSENSPNWNQL-----ANLSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGF 76
++ +P+ N+ + + SKRF S SCG FHS + NGKL+ WG GRLG
Sbjct: 221 IYGQIAAPSMNKFHLPYRISFNTSKRFV-SVSCGSFHSAAITENGKLYAWGLETDGRLGL 279
Query: 77 GHEDAAFVPT-LNPYLDDHVRCIALGGVHSIALTSLA 112
G PT + + D + IA G H+ AL L+
Sbjct: 280 GDCKQRSSPTEVEGFRDKKIGRIACGSKHTAALIILS 316
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--IALGGVHS 105
+CG +HS L G L++WG GD G+LG G+ + + PT+ + + +A G +H+
Sbjct: 146 ACGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHT 205
Query: 106 IALT 109
LT
Sbjct: 206 CILT 209
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G ++ VPT L D
Sbjct: 472 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDP 531
Query: 95 VRC-IALGGVHSIALTS 110
C ++ G ++ALT+
Sbjct: 532 NFCRVSCGHSMTVALTT 548
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANL------------SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N +SK F +CG +H ++ + +++ WGKG GRLG
Sbjct: 557 SPVYGQLGNPHADGKVPVRVEGKLSKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 616
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D PTL L D V+ IA G + A+
Sbjct: 617 HGDTDDRNSPTLVEALKDKQVKSIACGTNFTAAI 650
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ ++ G H+
Sbjct: 314 ACGGRHAALVTKQGEIFTWGEESGGRLGHGVDSDVLQPKLVDALGNTNIELVSCGEYHTC 373
Query: 107 ALT 109
A+T
Sbjct: 374 AVT 376
>gi|71412092|ref|XP_808247.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70872413|gb|EAN86396.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 301
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 51 GLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPT--LNPYLDDHVRCIALGGVHSIA 107
G +HSG++ G+L+ WG G GRLG G ++ A VPT HV +A G H++A
Sbjct: 40 GQWHSGVINTAGELFTWGVGYQGRLGHGDKEPALVPTKVRGALTGQHVIDVACGSFHTVA 99
Query: 108 LTSLAVEEC 116
LT C
Sbjct: 100 LTERGAVYC 108
>gi|350402535|ref|XP_003486520.1| PREDICTED: hypothetical protein LOC100745121 [Bombus impatiens]
Length = 1865
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIAL 108
G +HS L +G+++ WG G G+LG G+ D PTL L +R I G H++AL
Sbjct: 930 GQYHSVALTADGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGTVIRYITAGHAHTLAL 989
Query: 109 TSLAVEECNRCLILGE 124
++ + C I G+
Sbjct: 990 STEGIVYAFGCNIFGQ 1005
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGG-VHS 105
S SCG H+ V N ++ WG G+LG G P L L V A+ G HS
Sbjct: 875 SVSCGHCHTLAVTNNGVYAWGSSQFGQLGLGKVLQCSTPELITSLAQEVIIDAVAGQYHS 934
Query: 106 IALTS 110
+ALT+
Sbjct: 935 VALTA 939
>gi|307176968|gb|EFN66274.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Camponotus floridanus]
Length = 1719
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 38 LSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHV 95
+S+++ + G +HS L +G+++ WG G G+LG G+ D P+L L V
Sbjct: 913 ISLAQEIIIDAVAGQYHSVALTADGRVFTWGWGIHGQLGHGNTDEKITPSLVTALLGVVV 972
Query: 96 RCIALGGVHSIALT 109
RCI+ G H++AL+
Sbjct: 973 RCISAGYAHTLALS 986
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGG-VHS 105
S SCG H+ V N ++ WG G+LG G P L L + A+ G HS
Sbjct: 871 SVSCGHCHTLAVTNNGIYAWGSSQFGQLGLGKVLQCSSPELIISLAQEIIIDAVAGQYHS 930
Query: 106 IALTS 110
+ALT+
Sbjct: 931 VALTA 935
>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1096
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G +++ VPT L +
Sbjct: 469 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAALVEP 528
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 529 NFCQVACGHSMTVALTT 545
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANLS------------VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N +SK F CG +H ++ + +++ WGKG GRLG
Sbjct: 554 SPVYGQLGNPQADGKLPVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWGKGANGRLG 613
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D PT+ L D V+ + G + A+
Sbjct: 614 HGDTDDRSSPTIVEALKDKQVKSVVCGTSFTAAI 647
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + +V +A G HS
Sbjct: 311 ACGRRHAALVTKQGEVFSWGEELGGRLGHGVDSDVLHPKLVDGLKNTNVELVACGEYHSC 370
Query: 107 ALT 109
A+T
Sbjct: 371 AVT 373
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 49 SCGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIALGGVHS 105
+CG F L GK+W WGKGD RLG G++ P L P + IA+G +H
Sbjct: 3120 ACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRITEIAVGALHC 3179
Query: 106 IALT 109
+A+T
Sbjct: 3180 LAVT 3183
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIA 107
CG F L +G +W WGK DG RLG G D P + ++ H+ IA+G H +A
Sbjct: 678 CGSQFSVALGKDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVDIAVGPSHCLA 737
Query: 108 LT 109
LT
Sbjct: 738 LT 739
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 3/72 (4%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCI 98
V+K+ + + + + + NG+L+ WG+G GRLG G+ + +PTL L HV +
Sbjct: 561 VNKKITQIACGSTYSAAVTSNGELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDV 620
Query: 99 ALGG--VHSIAL 108
A G H++A+
Sbjct: 621 ACGSGDAHTLAI 632
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS V +G+L+ WG GD GRLG G +P L D+ V IA G
Sbjct: 3014 ACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVIDIACGSRDAQ 3073
Query: 105 SIALT 109
++ALT
Sbjct: 3074 TLALT 3078
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L NG L+ WGKGD RLG G D P L + +A G +H +A
Sbjct: 4022 CGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQIVTVAAGSLHCVA 4081
Query: 108 LT 109
T
Sbjct: 4082 CT 4083
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
SCG HS + + G+L+ WGKG GRLG G D P L
Sbjct: 3915 SCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKL 3954
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYL 91
+ L ++ + K +N G + L +G ++ WG GDGGRL GH D P L +
Sbjct: 506 DSLIDIKIKKIAANVE--GEHYLALSSDGCVYSWGSGDGGRL--GHGDIRREPELVKELV 561
Query: 92 DDHVRCIALGGVHSIALTS 110
+ + IA G +S A+TS
Sbjct: 562 NKKITQIACGSTYSAAVTS 580
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAF 83
NSE+ +A LS S + G H+ + +G +W WG GD G+LG G D
Sbjct: 599 NSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDGDYGKLGRGGSDCCK 658
Query: 84 VPTLNPYLDDHVRCIA---LGGVHSIAL 108
VP + L H + I G S+AL
Sbjct: 659 VPKVVETLKHHNKYIVNVLCGSQFSVAL 686
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 48 SSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH---VRCIALGGV 103
++CG +H+ V + G+L+ WG G G+LG G+E P + +L D V IA G
Sbjct: 97 ATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSR 156
Query: 104 HSIALTSLA 112
H++ LT L
Sbjct: 157 HTVVLTDLG 165
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 41 SKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIA 99
+K + ++CG + L G+++ WG+G GRLG G E VP + + V +A
Sbjct: 198 AKTVTQVAACGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRVGHVA 257
Query: 100 LGGVHSIAL 108
GG HS A+
Sbjct: 258 CGGFHSAAI 266
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG H+ ++ +G ++ WG+GD GRLG G +VP + L+ + G H+
Sbjct: 46 ACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTA 105
Query: 107 ALT 109
A+T
Sbjct: 106 AVT 108
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 39 SVSKRFSNSS----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLD 92
+V K SN +CG +H+ +V + G + WGKG+ G+LG G ++ +P T++ +
Sbjct: 114 AVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYN 173
Query: 93 DHVRCIALGGVHSIALT 109
+ +R IA G H++AL+
Sbjct: 174 EKIRQIACGMAHTLALS 190
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFG--HEDAAFVPTLNPYLDDH---VRCIALGG 102
+CG+ H+ L VNG+++ WG G G+LG G E+ A V T D IA G
Sbjct: 180 ACGMAHTLALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGS 239
Query: 103 VHSIALT 109
H +A+T
Sbjct: 240 RHCMAIT 246
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVVNG-KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--IALGGVHS 105
+CG H + + +L+ WG G GRLG G ++ F PT+ +++R +A GG H+
Sbjct: 236 ACGSRHCMAITDDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHT 295
Query: 106 IALT 109
L+
Sbjct: 296 AVLS 299
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
S G HS L ++G ++ WG+ D G+LG GH D P+L LD+ V +A GG H+
Sbjct: 208 SAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTA 267
Query: 107 ALTS 110
LT+
Sbjct: 268 LLTT 271
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
S G HS L ++G ++ WG+ D G+LG GH D P+L LD+ V +A GG H+
Sbjct: 165 SAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTA 224
Query: 107 ALTS 110
LT+
Sbjct: 225 LLTT 228
>gi|270002031|gb|EEZ98478.1| hypothetical protein TcasGA2_TC000971 [Tribolium castaneum]
Length = 4191
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 51 GLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
G HS V + GKL+ WG+GD GRLG G +A +VPT L + V +A G H++ ++
Sbjct: 493 GYRHSAAVTDDGKLYTWGEGDHGRLGHGDSNARYVPTQVAGLAE-VGSVACGSSHTLVVS 551
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
+CG + + L NG+L+ WG+G+ GRLG G+ D VPTL L+ H+
Sbjct: 564 ACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHM 611
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYL 91
++L +++V+K + G F + L G+++ WGKG+ RLG G+E+ P +
Sbjct: 659 DKLLDINVAKVYCG----GQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALK 714
Query: 92 DDHVRCIALGGVHSIALT 109
V+ + +G +H +ALT
Sbjct: 715 TKKVKELCVGSLHVLALT 732
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G++ PTL L V +A+G +H +A
Sbjct: 3161 CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLA 3220
Query: 108 LT 109
+T
Sbjct: 3221 VT 3222
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEECNRCL 120
GKL+ G+G GRLG G + A P P+L +V I VHS +LA+ + R
Sbjct: 2961 GKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYV--IKKVAVHSGGKHALALTQDGRVF 3018
Query: 121 ILGEEEKRRL 130
GE E +L
Sbjct: 3019 SWGEGEDGKL 3028
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFG----HEDAAFVPTLNPYLDDHVRCIALGGVHSI 106
G + L + ++ WG GDGGRLG G +E+ + +L +D ++ IA G +S
Sbjct: 515 GKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESL---VDKNITFIACGSTYSA 571
Query: 107 ALTS 110
AL+S
Sbjct: 572 ALSS 575
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G L+ WGKG GRLG G + P L L D+
Sbjct: 4041 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY 4087
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
L +G ++ WG GD G+LG G D + P L L+ V I G S+ALT
Sbjct: 3116 ALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALT 3170
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALTS 110
L +G+++ WG+G+ G+LG G+ + P L L +R +A G HS A+TS
Sbjct: 3010 ALTQDGRVFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITS 3065
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIALTS 110
L G ++ WG+GD G+LG G+ + P L L + +A GG HS A+TS
Sbjct: 3997 ALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITS 4052
>gi|357166808|ref|XP_003580861.1| PREDICTED: uncharacterized protein LOC100835494 [Brachypodium
distachyon]
Length = 1068
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 47 SSSCGLFHSGLVV----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
S SCG++HS VV +GKL+ WG GD RLG G A PT P L D+
Sbjct: 425 SVSCGVWHSAAVVEVIMTQSNASSGKLFTWGDGDKYRLGHGDRSAKLKPTCVPSLIDYNF 484
Query: 96 RCIALGGVHSIALTS 110
A G +I LT+
Sbjct: 485 HKSACGHTLTIGLTT 499
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 22 RLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHED 80
+L N N + +L V +CG +H ++ N G+++ WGKG GRLG G
Sbjct: 513 QLGNPNNDGRYPRLVEDKVGGGGVVEVACGSYHVAVLTNTGEVYTWGKGANGRLGHGDIA 572
Query: 81 AAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
VPTL L D V+ IA G + A++
Sbjct: 573 DRKVPTLVEALRDRSVKRIACGSSFTAAIS 602
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG+ H+ L+ +++ WG+ GRLG G + F P L L +V IA G H+
Sbjct: 268 ACGVKHAALITRQAEVFTWGEECSGRLGHGAGTSIFQPRLLESLSICNVEIIACGEFHTC 327
Query: 107 ALTS 110
A+T+
Sbjct: 328 AVTA 331
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG-- 102
S CG +S + G L WG+G RLG G+ D +PTL L DH V +ALG
Sbjct: 669 SVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGD 728
Query: 103 VHSIALTS 110
HS+ALTS
Sbjct: 729 AHSLALTS 736
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R +A G HS
Sbjct: 3076 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSA 3135
Query: 107 ALTS 110
A++S
Sbjct: 3136 AISS 3139
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L G+++ WG+G+ G+LG G+ + P L +L+ V IA G HS A+T+
Sbjct: 4146 ALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA 4201
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 3235 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 3294
Query: 108 LT 109
+T
Sbjct: 3295 VT 3296
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG-- 102
S CG +S + G L WG+G RLG G+ D +PTL L DH V +ALG
Sbjct: 326 SVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGD 385
Query: 103 VHSIALTS 110
HS+ALTS
Sbjct: 386 AHSLALTS 393
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R +A G HS
Sbjct: 2734 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSA 2793
Query: 107 ALTS 110
A++S
Sbjct: 2794 AISS 2797
Score = 35.8 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 2893 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 2952
Query: 108 LT 109
+T
Sbjct: 2953 VT 2954
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG-- 102
S CG +S + G L WG+G RLG G+ D +PTL L DH V +ALG
Sbjct: 672 SVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGD 731
Query: 103 VHSIALTS 110
HS+ALTS
Sbjct: 732 AHSLALTS 739
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R +A G HS
Sbjct: 3079 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSA 3138
Query: 107 ALTS 110
A++S
Sbjct: 3139 AISS 3142
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L G+++ WG+G+ G+LG G+ + P L +L+ V IA G HS A+T+
Sbjct: 4150 ALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA 4205
Score = 35.8 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 3238 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 3297
Query: 108 LT 109
+T
Sbjct: 3298 VT 3299
>gi|195567859|ref|XP_002107476.1| GD17489 [Drosophila simulans]
gi|194204883|gb|EDX18459.1| GD17489 [Drosophila simulans]
Length = 1505
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG-- 102
S CG +S + G L WG+G RLG G+ D +PTL L DH V +ALG
Sbjct: 259 SVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGD 318
Query: 103 VHSIALTS 110
HS+ALTS
Sbjct: 319 AHSLALTS 326
>gi|195482065|ref|XP_002101895.1| GE17875 [Drosophila yakuba]
gi|194189419|gb|EDX03003.1| GE17875 [Drosophila yakuba]
Length = 1023
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG-- 102
S CG +S + G L WG+G RLG G+ D +PTL L DH V +ALG
Sbjct: 672 SVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGD 731
Query: 103 VHSIALTS 110
HS+ALTS
Sbjct: 732 AHSLALTS 739
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVV--NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSI 106
S GL + G+ + NG +W WGK D G LG G P L L D V IA GG +S+
Sbjct: 139 SGGLAYHGMALSENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSD-VTAIAAGGYYSL 197
Query: 107 ALTS 110
AL S
Sbjct: 198 ALKS 201
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G + L +G +W WG G LG G VP L D V IA GG HS+A+
Sbjct: 193 GYYSLALKSDGTVWAWGVNGSGELGDGTTTERHVPVQVAGLTD-VMAIAAGGSHSLAI 249
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 51 GLFHSGLVVN--GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G +HS L V+ G +W WG +LG ++ +P ++ HVR I+ GG HS+A+
Sbjct: 292 GGYHS-LAVDQAGNVWSWGDNSQQQLGLSSNASSLIPVPVTGIE-HVREISAGGFHSVAM 349
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALT 109
G F + L +G+++ WGKGD RLG G+E+ P L L + VR +++G +H +A+T
Sbjct: 668 GQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDLSVGNLHILAIT 727
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G++ PTL L V +A+G +H +A
Sbjct: 3174 CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLA 3233
Query: 108 LT 109
+T
Sbjct: 3234 VT 3235
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
G + L G ++ WG GDGGRLG G + P + L D V IA G +S A++
Sbjct: 510 GKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAIS 569
Query: 110 S 110
S
Sbjct: 570 S 570
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG HS + + G L+ WGKG GRLG G D PT+
Sbjct: 4039 ACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTV 4078
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
HSG L +GK++ WG+G+ G+LG G+ + P L L +R IA G HS
Sbjct: 3015 HSGGKHALALTQDGKVFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSA 3074
Query: 107 ALTS 110
A+ S
Sbjct: 3075 AIAS 3078
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 40 VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPT----LNPYLDDH 94
+S R +CG +S + + G+L WG+G GRLG G D +PT LN + H
Sbjct: 550 LSDRTVTYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTH 609
Query: 95 VRC 97
V C
Sbjct: 610 VAC 612
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIALTS 110
+G ++ WG GD G+LG G D + +P + + LD +V + GG S ALT+
Sbjct: 625 SGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTA 676
Score = 35.8 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 41 SKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
SKR + + CG HS + NG+L+ WG G+ GRLG G P L
Sbjct: 3060 SKRIRDIA-CGSGHSAAIASNGELYTWGLGEYGRLGHGDTTTHLKPKL 3106
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL--GGVHSIALT 109
GKL+ G+G GRLG G + P P+L + ++ +A+ GG H++ALT
Sbjct: 2974 GKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALT 3025
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIALTS 110
L G ++ WG+GD G+LG G+ P L L + IA GG HS A++S
Sbjct: 3995 ALSSEGHVYSWGEGDDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISS 4050
>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
Length = 892
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G ++A VPT L +
Sbjct: 274 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 333
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 334 NFCQVACGHCLTVALTT 350
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 42 KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIA 99
K F SCG +H ++ + +++ WGKG GRLG G D PTL L D VR +
Sbjct: 384 KNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRSVV 443
Query: 100 LG 101
G
Sbjct: 444 CG 445
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + P L L ++ +A G H+
Sbjct: 116 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTC 175
Query: 107 ALT 109
A+T
Sbjct: 176 AVT 178
>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
Length = 1156
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPT 86
S+S + +++CG +H+ +V GKL+ WG GD GRLG G ++ +PT
Sbjct: 462 SLSGLWVKAAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 521
Query: 87 LNPYLDDH-VRCIALGGVHSIALTSLA 112
L DH ++ G + ++ LT L
Sbjct: 522 CVAQLVDHDFVQVSCGRMLTVGLTCLG 548
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVV--NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSI 106
S GL + G+ + NG +W WGK D G LG G P L L D V IA GG +S+
Sbjct: 139 SGGLAYHGMALSENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSD-VTAIAAGGYYSL 197
Query: 107 ALTS 110
AL S
Sbjct: 198 ALKS 201
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 51 GLFHSGLVVN--GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G +HS L V+ G +W WG +LG ++ +P P ++ HVR I+ GG HS+A+
Sbjct: 292 GGYHS-LAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVPVPGIE-HVREISAGGFHSVAM 349
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G + L +G +W WG G LG G VP L D V IA GG HS+A+
Sbjct: 193 GYYSLALKSDGTVWAWGVNGSGELGDGTTTDRHVPVQVAGLTD-VMAIAAGGSHSLAI 249
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGG--VHSIA 107
G + + + NG L+ WG+G+ GRLG G + PT+ L D+H+ +A G H++
Sbjct: 576 GTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLC 635
Query: 108 LTS 110
+TS
Sbjct: 636 ITS 638
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + PT+ L D V +A+G +H +A
Sbjct: 3146 CGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLA 3205
Query: 108 LT 109
+T
Sbjct: 3206 VT 3207
Score = 40.4 bits (93), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIAL--GGVHSIALT 109
GKL+ G+G GRLG GH + P P+L +V + +A+ GG H++ALT
Sbjct: 2946 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALT 2997
Score = 38.9 bits (89), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
L + ++ WG+GD G+LG G+ A P L L + + IA GG HS A+TS
Sbjct: 3971 ALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITS 4026
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
S G L ++GK++ WG+G+ G+LG G+ P + L +R IA G HS A
Sbjct: 2988 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAA 3047
Query: 108 LTS 110
+TS
Sbjct: 3048 ITS 3050
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIA 107
CG F L +G ++ WGKG+G +LG E+ P + L D V ++LG H +A
Sbjct: 680 CGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLA 739
Query: 108 LT 109
LT
Sbjct: 740 LT 741
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG HS + + G+L+ WGKG GRLG G + P L
Sbjct: 4015 ACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKL 4054
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG---LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVH 104
+CG F++ + GK++ WG GD G+LG G D + +P L L + + + G
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQF 684
Query: 105 SIALT 109
S+AL+
Sbjct: 685 SVALS 689
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALT 109
G + L + +++ WG GDGGRLG G PTL L + + GG +S A++
Sbjct: 524 GKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQALKGKDIIDVECGGTYSAAIS 583
Query: 110 S 110
+
Sbjct: 584 A 584
>gi|302822159|ref|XP_002992739.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
gi|300139480|gb|EFJ06220.1| hypothetical protein SELMODRAFT_430894 [Selaginella moellendorffii]
Length = 982
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 32 WNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL 91
W+ A + V +S+++SC +GKL+ WG GD RLG G ++ VPT L
Sbjct: 449 WHTAAVVEVIVGYSSATSCS--------SGKLFTWGDGDKYRLGHGDKEQKLVPTCVAAL 500
Query: 92 DDH-VRCIALGGVHSIALTS 110
D+ R +A G ++ALT+
Sbjct: 501 VDYNFRQVACGHSLTVALTT 520
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRC 97
+++ F CG H + L +++ WGKG GRLG G + PTL L D V+
Sbjct: 552 LARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKT 611
Query: 98 IALG 101
+A G
Sbjct: 612 VACG 615
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFV--PTLNPYLDDHVRCIALGGV 103
S +CG +H+ +V +GKL+ +G+ +GG+LG G +A V P + + V +A GG
Sbjct: 192 SVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGGN 251
Query: 104 HSIALTS 110
H++ALT+
Sbjct: 252 HTVALTA 258
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVNG-KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+ G FH+ V + KL+ +G+G G LG G E +PT L+D V IA GG HS
Sbjct: 93 AAGRFHTLAVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSA 152
Query: 107 ALT 109
A+T
Sbjct: 153 AIT 155
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 39 SVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
S+ + N +CG +HS + NG+L+IWG G+LG ++ ++ L+ L V
Sbjct: 135 SLEDKDVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKNDTISYPTMLD--LGKSVIS 192
Query: 98 IALGGVHSIALTS 110
+A G H+ +T+
Sbjct: 193 VACGYYHTAVVTA 205
>gi|302824131|ref|XP_002993711.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
gi|300138435|gb|EFJ05203.1| hypothetical protein SELMODRAFT_431761 [Selaginella moellendorffii]
Length = 991
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 32 WNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPY 90
W+ A + V +S+++SC +GKL+ WG GD RLG G ++ VPT +
Sbjct: 458 WHTAAVVEVIVGYSSATSCS--------SGKLFTWGDGDKYRLGHGDKEQKLVPTCVAAL 509
Query: 91 LDDHVRCIALGGVHSIALTS 110
+D + R +A G ++ALT+
Sbjct: 510 VDYNFRQVACGHSLTVALTT 529
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRC 97
+++ F CG H + L +++ WGKG GRLG G + PTL L D V+
Sbjct: 561 LARTFVEEIGCGAHHVAALSSKTEIYTWGKGANGRLGHGDVEDRTAPTLVEALRDKQVKT 620
Query: 98 IALG 101
+A G
Sbjct: 621 VACG 624
>gi|332030031|gb|EGI69856.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Acromyrmex echinatior]
Length = 2956
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 39 SVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVR 96
S+++ + G +HS L +G+++ WG G G+LG G+ D +P+L L V
Sbjct: 1992 SLAQEIIVDAVAGQYHSVALTADGRIFTWGWGVHGQLGHGNTDEKAIPSLVKALLGIVVC 2051
Query: 97 CIALGGVHSIALTSLAVEECNRCLILGE 124
CI+ G H++AL+ V C ILG+
Sbjct: 2052 CISAGYAHTLALSIDGVLYAFGCNILGQ 2079
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGG-VHS 105
S SCG H+ V N ++ WG G+LG G P L L + A+ G HS
Sbjct: 1949 SVSCGHCHTLAVTNNGIYAWGASQFGQLGLGKVLQCSSPELVTSLAQEIIVDAVAGQYHS 2008
Query: 106 IALTS 110
+ALT+
Sbjct: 2009 VALTA 2013
>gi|225466229|ref|XP_002267377.1| PREDICTED: uncharacterized protein LOC100253065 [Vitis vinifera]
Length = 1023
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPT 86
S+S + +++CG +H+ +V GKL+ WG GD GRLG G ++ +PT
Sbjct: 462 SLSGLWVKAAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 521
Query: 87 LNPYLDDH-VRCIALGGVHSIALTSLA 112
L DH ++ G + ++ LT L
Sbjct: 522 CVAQLVDHDFVQVSCGRMLTVGLTCLG 548
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGL-VVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCGL+H L ++G+++ GK D G+LG GH VPT ++ V +A G H+ A
Sbjct: 547 SCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPTQVVLPNELVCFVACGYYHATA 606
Query: 108 LTS 110
+TS
Sbjct: 607 ITS 609
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 39 SVSKRFSNSSSCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVR 96
S+ ++ S++ HS LV V+G+L+ +G D G+LG H P L L HV
Sbjct: 485 SIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHHVS 544
Query: 97 CIALGGVHSIALT 109
++ G H + T
Sbjct: 545 MVSCGLYHMVLCT 557
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 8/103 (7%)
Query: 13 LMAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSC-GLFHSGLVVNGKLWIWGKGDG 71
++++ V L+ + SP QL + +S G + GL +G+++ WG GDG
Sbjct: 589 ILSKAGKVYMLYYTSLSPTLQQLNGFGDREVIRIASHPDGKHYMGLTSDGEVFSWGNGDG 648
Query: 72 GRLGFG----HEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
G+LG G HE+ A + L+ V I G +S+ALTS
Sbjct: 649 GKLGHGDYQNHEEPALITGLS---GKQVAKICCGSSYSVALTS 688
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSIA 107
CG F L +G ++ WGKGD RLG G ED A P + V+ IA+G +H +A
Sbjct: 784 CGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMA 843
Query: 108 LT 109
+T
Sbjct: 844 IT 845
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G++W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3717 CGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLA 3776
Query: 108 LT 109
+T
Sbjct: 3777 VT 3778
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 50 CGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH----VRCIALGGVH 104
CG +S L NG+++ WGKG+ GRLG G + P L + H V C G
Sbjct: 678 CGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVAC-GSGDAQ 736
Query: 105 SIALT 109
++A+T
Sbjct: 737 TLAVT 741
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
HSG L +GK++ WG+GD G+LG P L L VR IA G HS
Sbjct: 3558 HSGGRHSLALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSA 3617
Query: 107 ALTS 110
A+TS
Sbjct: 3618 AITS 3621
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSIA 107
CG F L +G ++ WGKGD RLG G +D P ++ + V +A G +H +A
Sbjct: 4713 CGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVIDVACGSLHCVA 4772
Query: 108 LT 109
T
Sbjct: 4773 CT 4774
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALT 109
L GK++ WG GD G+LG G + VP L D C I G S+ALT
Sbjct: 3672 ALTDEGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQKVCQIECGAQFSLALT 3726
>gi|224085093|ref|XP_002307488.1| predicted protein [Populus trichocarpa]
gi|222856937|gb|EEE94484.1| predicted protein [Populus trichocarpa]
Length = 1061
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H + L +++ WGKG GRLG G + PT+ L D HV+ IA G +S
Sbjct: 505 ACGAYHVAALTSRNEVYTWGKGANGRLGHGDGEDRKTPTIVEALKDRHVKYIACGANYSA 564
Query: 107 AL 108
A+
Sbjct: 565 AI 566
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ VV GKL+ WG GD RLG G ++ PT P L D+
Sbjct: 390 ACGVWHTAAVVEVIVTQSSSSASSGKLFTWGDGDKNRLGHGDKEPRLEPTCVPALIDYNF 449
Query: 96 RCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 450 HKIACGHSLTVGLTT 464
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLN---PYLDDHVRCIALGGVH 104
+CG+ H+ +V G+++ WG+ GGRLG G P L P V + G H
Sbjct: 284 ACGVRHAAMVTRQGEVFTWGEESGGRLGHGAGKDVIQPCLRISGPLEGLQVASVTCGPWH 343
Query: 105 SIALTSL 111
+ +TS+
Sbjct: 344 TALVTSM 350
>gi|47214261|emb|CAG01938.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1055
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 49 SCGLFHSGLVVN--GKLWIWGKGDGGRLGFGHEDAAF-VPTLNPYLDDH-VRCIALGGVH 104
SCG HS + VN G+++ WG GDGG+LG G +AA +P L L DH + + G H
Sbjct: 89 SCGQAHS-MAVNEQGQVFAWGAGDGGQLGLGTTEAAVRIPRLIKRLCDHRIAQVMCGNQH 147
Query: 105 SIALT 109
IAL+
Sbjct: 148 CIALS 152
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V ++F+S +P L+ + +++ S G HS L V+G ++ WG+ D G+LG G
Sbjct: 70 VGKIFDSTTAPQIVEHLSGVPLAQ-----ISAGKSHSMALSVSGNIYSWGRNDFGQLGLG 124
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
H D P+L L++ V +A GG H+ LT
Sbjct: 125 HTDDKDFPSLIEALENQKVEFLACGGSHTALLT 157
>gi|297738141|emb|CBI27342.3| unnamed protein product [Vitis vinifera]
Length = 925
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPT 86
S+S + +++CG +H+ +V GKL+ WG GD GRLG G ++ +PT
Sbjct: 410 SLSGLWVKAAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLPT 469
Query: 87 LNPYLDDH-VRCIALGGVHSIALTSLA 112
L DH ++ G + ++ LT L
Sbjct: 470 CVAQLVDHDFVQVSCGRMLTVGLTCLG 496
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL- 91
++L +++V K F S F + L +G+++ WGKGD RLG G E+ P + L
Sbjct: 662 DKLLDINVVKVFCGSQ----FSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLR 717
Query: 92 DDHVRCIALGGVHSIALT 109
D ++ +++G H + LT
Sbjct: 718 DKKIKDLSVGATHILVLT 735
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG + + L V+G+L+ WG+G+ GRLG G+ D +PTL L H
Sbjct: 567 ACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGH 613
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHS 105
S S G H L +G ++ WG GDGGRLG G + P L L+ ++ IA G +S
Sbjct: 514 SHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEALLEKNIVFIACGSTYS 573
Query: 106 IALT 109
AL+
Sbjct: 574 AALS 577
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G++ PTL L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G L+ WGKG GRLG G D P + L D+
Sbjct: 4088 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 4134
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 48 SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSI 106
SS G L G ++ WG+GD G+LG G++ + P L L + IA GG HS
Sbjct: 4036 SSGGKHCLALSSEGHVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSA 4095
Query: 107 ALTS 110
A+TS
Sbjct: 4096 AITS 4099
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
HSG L +GK++ WG+G+ G+LG G+ + P L L +R IA G HS
Sbjct: 3054 HSGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSA 3113
Query: 107 ALTS 110
A+ S
Sbjct: 3114 AIAS 3117
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIAL--GGVHSIALT 109
GKL+ G+G GRLG G ++ P P+L V + +A+ GG H++ALT
Sbjct: 3013 GKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALT 3064
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV----RCIALGGVHSIALTS 110
+ +GK++ G G GRLG G D+ +PTL + HV ++ GG H +AL+S
Sbjct: 3990 AVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESI-QHVFIKKVAVSSGGKHCLALSS 4047
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 41 SKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCI 98
SKR + + CG HS + NG+L+ WG G+ GRLG G P L L H V +
Sbjct: 3099 SKRIRDIA-CGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQV 3157
Query: 99 ALGG--VHSIALTS 110
A G ++ALT+
Sbjct: 3158 ACGSRDAQTMALTT 3171
>gi|432098306|gb|ELK28108.1| X-linked retinitis pigmentosa GTPase regulator, partial [Myotis
davidii]
Length = 1369
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTLNP-YLDDHVRCIALGGVH 104
SCG H+ L+ + G+++ +G G G+LG G E+ FVPTL P +L V +A GG H
Sbjct: 295 SCGENHTALITDIGRMYTFGDGRYGKLGLGMENFTNQFVPTLCPNFLRFKVHLVACGGCH 354
Query: 105 SIALTS 110
+ +
Sbjct: 355 MVVFAT 360
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGF------GHEDAAFVPTLNPYLDDHVRCIALG 101
SCG +HS V + G+L+ +G+ + G+LG H+ VP L P + + V +A G
Sbjct: 190 SCGYYHSAFVTMEGELYTFGEPEFGKLGLPKQLLMNHK----VPQLVPGIPEKVIQVACG 245
Query: 102 GVHSIALTSLAV 113
G H++ LT AV
Sbjct: 246 GGHTVVLTEKAV 257
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT----LNPYLDDHVRC 97
+CG H+ ++ N KL+++G+ D G+LG G + A PT L P HV C
Sbjct: 35 ACGDEHTAVITGNKKLYMFGRNDWGQLGLGSKSAVCKPTCVKALKPEKVKHVAC 88
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 172 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNEFGQLGLG 226
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 227 HTESKDYPSLIEALDNQEVEFLACGGSHSALLTQ 260
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ + L G
Sbjct: 144 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 201 AHSMALS 207
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 171 VGRTFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNEFGQLGLG 225
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 226 HTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ 259
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G F T P + +H+ + L G
Sbjct: 143 TCGDYHSLALSKGGELFAWGQNLHGQLGVGR---TFPSTTTPQIVEHLAGVPLAQISAGE 199
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 200 AHSMALS 206
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 171 VGRTFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNEFGQLGLG 225
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 226 HTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ 259
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G F T P + +H+ + L G
Sbjct: 143 TCGDYHSLALSKGGELFAWGQNLHGQLGVGR---TFPSTTTPQIVEHLAGVPLAQISAGE 199
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 200 AHSMALS 206
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
S G HS L ++G ++ WG+ D G+LG GH D P+L LD V +A GG H+
Sbjct: 106 SAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTA 165
Query: 107 ALT 109
LT
Sbjct: 166 LLT 168
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G A+ +PT P L +H+ + L G
Sbjct: 53 TCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFAS-IPT--PQLVEHLSGVPLVQISAGK 109
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 110 AHSMALS 116
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus
impatiens]
Length = 5118
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
+CG +S L NG+L+ WG+G+ GRLG G+ D +PTL L+ H+
Sbjct: 555 ACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHM 602
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD 92
++L +++V+K + G F + L G+++ WGKG+G RLG G+E+ P + L
Sbjct: 650 DKLLDINVAKVYCG----GQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLK 705
Query: 93 -DHVRCIALGGVHSIALT 109
V+ + +G H +ALT
Sbjct: 706 PKKVKELCVGNFHVLALT 723
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G++ PTL L V +A+G +H +A
Sbjct: 3506 CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLA 3565
Query: 108 LT 109
+T
Sbjct: 3566 VT 3567
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL--GGVHSIALT 109
GKL+ G+G GRLG G + P L P+L + ++ +A+ GG H++ALT
Sbjct: 3306 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALT 3357
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G L+ WGKG GRLG G + P L L D+
Sbjct: 4404 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY 4450
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALTS 110
L +GK++ WG+G+ G+LG G+ + P L L +R IA G HS A+TS
Sbjct: 3355 ALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS 3410
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIAL--GGVHSIALTS 110
+ +GK++ G G GRLG G D+ VPTL + V+ +A+ GG H +AL+S
Sbjct: 4306 AVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS 4363
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFG----HEDAAFVPTLNPYLDDHVRCIALGG 102
S S G + L + ++ WG GDGGRLG G +++ V L +D ++ IA G
Sbjct: 502 SHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEAL---VDKNITFIACGS 558
Query: 103 VHSIALTS 110
+S L+S
Sbjct: 559 TYSAVLSS 566
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G ++ WGKGD RLG G +D P L + IA G +H +A
Sbjct: 4511 CGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4570
Query: 108 LT 109
T
Sbjct: 4571 CT 4572
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
L +G ++ WG GD G+LG G D + P L L+ V I G S+ALT
Sbjct: 3461 ALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALT 3515
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIALTS 110
L G ++ WG+GD G+LG G+ P L L + IA GG HS A+TS
Sbjct: 4360 ALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITS 4415
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 43 RFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
+ + ++CG + + +G LW WG+G GRLG G+E P L V+ +A G
Sbjct: 197 KITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACG 256
Query: 102 GVHSIALT 109
G HS +T
Sbjct: 257 GFHSACVT 264
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 22 RLFNSENSPNWNQLANL--SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
RL +++N +W + +L +++ + +CG +H+ + + G LW WG G G+LG G+
Sbjct: 70 RLGHADN--HWKYVPHLVSALTGKSIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHGN 127
Query: 79 EDAAFVPT-LNPYLDDHVRCIALGGVHSIAL 108
E P + ++ V IA G H+ AL
Sbjct: 128 EVGHPAPCRVEAFIGREVEQIACGSRHTAAL 158
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG H+ ++ K +W WG+GD GRLG +VP L L ++ + G H+
Sbjct: 45 ACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTA 104
Query: 107 ALT 109
A++
Sbjct: 105 AIS 107
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 43 RFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL 100
R S CG +S + + G L+ WG+G GRLG G D +P + L DH V +AL
Sbjct: 697 RLVKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVAL 756
Query: 101 GG--VHSIALTS 110
G H++ LTS
Sbjct: 757 GSGDAHTLCLTS 768
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R IA G HS
Sbjct: 3154 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSA 3213
Query: 107 ALTS 110
A++S
Sbjct: 3214 AISS 3217
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P L H V +A+G +H +A
Sbjct: 3313 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHRVIHVAVGALHCLA 3372
Query: 108 LT 109
+T
Sbjct: 3373 VT 3374
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L +G+++ WG+G+ G+LG G+ + P L +L+ V IA G HS A+T+
Sbjct: 4315 ALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA 4370
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
+CG +S L NG+L+ WG+G+ GRLG G+ D +PTL L+ H+
Sbjct: 563 ACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHM 610
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL- 91
++L +++V+K + G F + L G+++ WGKG+G RLG G+E+ P + L
Sbjct: 658 DKLLDINVAKVYCG----GQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLX 713
Query: 92 DDHVRCIALGGVHSIALT 109
V+ + +G H +ALT
Sbjct: 714 TKKVKELCVGNFHVLALT 731
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G++ PTL L V +A+G +H +A
Sbjct: 3511 CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLA 3570
Query: 108 LT 109
+T
Sbjct: 3571 VT 3572
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL--GGVHSIALT 109
GKL+ G+G GRLG G + P L P+L + ++ +A+ GG H++ALT
Sbjct: 3311 GKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALT 3362
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G L+ WGKG GRLG G + P L L D+
Sbjct: 4437 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEALQDY 4483
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALTS 110
L +GK++ WG+G+ G+LG G+ + P L L +R IA G HS A+TS
Sbjct: 3360 ALTQDGKIFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS 3415
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIAL--GGVHSIALTS 110
+ +GK++ G G GRLG G D+ VPTL + V+ +A+ GG H +AL+S
Sbjct: 4339 AVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS 4396
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFG----HEDAAFVPTLNPYLDDHVRCIALGG 102
S S G + L + ++ WG GDGGRLG G +++ V L +D ++ IA G
Sbjct: 510 SHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEAL---VDKNITFIACGS 566
Query: 103 VHSIALTS 110
+S L+S
Sbjct: 567 TYSAVLSS 574
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G ++ WGKGD RLG G +D P L + IA G +H +A
Sbjct: 4544 CGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVA 4603
Query: 108 LT 109
T
Sbjct: 4604 CT 4605
Score = 35.4 bits (80), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
L +G ++ WG GD G+LG G D + P L L+ V I G S+ALT
Sbjct: 3466 ALTADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALT 3520
Score = 35.0 bits (79), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIALTS 110
L G ++ WG+GD G+LG G+ P L L + IA GG HS A+TS
Sbjct: 4393 ALSSEGHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITS 4448
>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
Length = 957
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 105 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNEFGQLGLG 159
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 160 HTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQ 193
>gi|115375506|ref|ZP_01462765.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115367461|gb|EAU66437.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 531
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 36 ANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDD 93
A +VS F S G H+G+V G L++WG+ + G+LG G E A VP P ++
Sbjct: 153 AEQTVSFHFGGLSGAGGSHTGVVRQGALYLWGRNNRGQLGLGAEVTADQRVPKPVPGMEG 212
Query: 94 HVRCIALGGVHSIAL 108
V +AL HS+AL
Sbjct: 213 -VAAVALNQNHSMAL 226
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L NGK+W WGKGD RLG G + P + L D +V +++G +H IA
Sbjct: 2904 CGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIA 2963
Query: 108 LT 109
+T
Sbjct: 2964 VT 2965
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALTS 110
L +G ++ WG+GD G+LG G + P L L D HV +A GG HS +T+
Sbjct: 3720 ALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIESLRDKHVVSVACGGAHSACITA 3775
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTS 110
L ++G+++ WG+G+ G+LG G++ + P L L +R +A G HS A+TS
Sbjct: 2753 ALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVTS 2808
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP--TLNPYLDDHVRCIALGGVHSI 106
CG F L G ++ WGKGD RLG G ED P V +A+G +H +
Sbjct: 3871 CGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRVIQVAVGSLHCV 3930
Query: 107 ALT 109
A T
Sbjct: 3931 ACT 3933
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPT----LNPYLDDHVRCIALGGVHSIALT 109
+GK++ G+G GRLG GH P L+PY V + GG H++ALT
Sbjct: 2703 DGKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKV-AVHSGGRHALALT 2755
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNP 89
+CG HS V + G+L+ WG G+ GRLG G VP L P
Sbjct: 2797 ACGSSHSAAVTSSGELYTWGSGEYGRLGHGDN----VPQLKP 2834
Score = 35.4 bits (80), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 47 SSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
S +CG HS + +G+L+ WGKG GRLG G + P
Sbjct: 3762 SVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKP 3801
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGG--VHSIA 107
G + + + NG L+ WG+G+ GRLG G + PT+ L D+H+ +A G H++
Sbjct: 576 GTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIKVACGSFYAHTLC 635
Query: 108 LTS 110
+TS
Sbjct: 636 ITS 638
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIA 107
CG F L +G ++ WGKG+G +LG E+ P + L D V ++LG H +A
Sbjct: 680 CGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLA 739
Query: 108 LT 109
LT
Sbjct: 740 LT 741
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG---LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVH 104
+CG F++ + GK++ WG GD G+LG G D + +P L L + + + G
Sbjct: 625 ACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLIEKLQNVKIVQVYCGAQF 684
Query: 105 SIALT 109
S+AL+
Sbjct: 685 SVALS 689
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 172 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNEFGQLGLG 226
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 227 HTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQ 260
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ + L G
Sbjct: 144 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 201 AHSMALS 207
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG FHS +V +GK++ +G G+ G+LG G + PTL LD + I G HS+
Sbjct: 222 SCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSV 281
Query: 107 ALTS 110
ALTS
Sbjct: 282 ALTS 285
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 42 KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIA 99
KR S+CG FH+G + + G+++ WG+G GRLG G E P L L I+
Sbjct: 164 KRVVQLSACG-FHTGCLTDAGEVYTWGEGKFGRLGHGAERNCHSPRLVETLLGKRPVQIS 222
Query: 100 LGGVHSIALTS 110
GG HS +T+
Sbjct: 223 CGGFHSAVVTA 233
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD----DHVRCIALGGVHSIALTS 110
G ++ WG+GD GRLG G +VP L L HV C G H+ A++S
Sbjct: 26 GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTC---GSYHTAAVSS 76
Score = 35.4 bits (80), Expect = 7.6, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 22 RLFNSENSPNWNQLANL--SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
RL + +N W + L S++ + +CG +H+ V + G L+ WG G G+LG G+
Sbjct: 38 RLGHGDNG--WKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGN 95
Query: 79 EDAAFVPT-LNPYLDDHVRCIALGGVHSIALTS 110
E P ++ + V IA G H+ +TS
Sbjct: 96 ESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTS 128
>gi|310818131|ref|YP_003950489.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|309391203|gb|ADO68662.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 512
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 36 ANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDD 93
A +VS F S G H+G+V G L++WG+ + G+LG G E A VP P ++
Sbjct: 134 AEQTVSFHFGGLSGAGGSHTGVVRQGALYLWGRNNRGQLGLGAEVTADQRVPKPVPGMEG 193
Query: 94 HVRCIALGGVHSIAL 108
V +AL HS+AL
Sbjct: 194 -VAAVALNQNHSMAL 207
>gi|390358768|ref|XP_796864.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Strongylocentrotus purpuratus]
Length = 4631
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 28 NSPNWNQLANLSVSKRFSNS---SSCGL-FHS-GLVVNGKLWIWGKGDGGRLGFGHEDAA 82
NS + + L +S + F + +SCG HS L +G+++ WG GD G+LG G+ D
Sbjct: 3754 NSDDLHTLTVISALQGFVVTQLVTSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQ 3813
Query: 83 FVPTLNPYLD----DHVRCIALGGVHSIALTSLAVEECN 117
P L VRCIA G HS A T+ V C+
Sbjct: 3814 RRPRQVEALQGEEISQVRCIAAGRSHSAAWTAPPVPRCS 3852
Score = 41.6 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 29 SPNWNQLAN-----LSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAA 82
S N +LAN L+++ F + G H+ L G +W WG G+LG GH +
Sbjct: 4042 SENRARLANRPQQVLALAGFFVEDIAVGSEHTVALTSTGDVWGWGSNSDGQLGLGHFNTV 4101
Query: 83 FVPTLNPYLD-DHVRCIALGGVHSIALTSLAVEECN 117
P L L +++ IA G HS A T+ V C+
Sbjct: 4102 REPVLVGSLQGKNIQQIAAGRSHSAAWTAPPVPRCS 4137
>gi|296083842|emb|CBI24230.3| unnamed protein product [Vitis vinifera]
Length = 953
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALTS 110
+GKL+ WG GD GRLG G ++A VPT L D C +A G ++ALT+
Sbjct: 347 SGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVDPNFCRVACGHSLTVALTT 398
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 14/87 (16%)
Query: 29 SPNWNQLANLS------------VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N ++K F +CG +H ++ + +++ WGKG GRLG
Sbjct: 407 SPVYGQLGNPQADGKLPTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 466
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALG 101
G D PTL L D V+ IA G
Sbjct: 467 HGDTDDRNSPTLVEALKDKQVKSIACG 493
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 250 ACGGRHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTNIELVACGEYHTC 309
Query: 107 ALT 109
A+T
Sbjct: 310 AVT 312
>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
Length = 1106
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANLS------------VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N +S+ F +CG +H ++ + +++ WGKG GRLG
Sbjct: 557 SPVYGQLGNPQADGKLPILVEGKLSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLG 616
Query: 76 FGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIAL 108
G D PTL L D V+ IA G + A+
Sbjct: 617 HGDTDDRNTPTLVEALKDKDVKSIACGTTFTAAI 650
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 13/76 (17%)
Query: 48 SSCGLFHSGLVVNG-------------KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV L+ WG GD GRLG ++A VPT + +
Sbjct: 473 AACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLGHVDKEAKLVPTCVALAEHN 532
Query: 95 VRCIALGGVHSIALTS 110
V +A G ++ALT+
Sbjct: 533 VCQVACGHSLTVALTT 548
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G HS
Sbjct: 315 ACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHSC 374
Query: 107 ALT 109
A+T
Sbjct: 375 AVT 377
>gi|328709531|ref|XP_003243987.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Acyrthosiphon pisum]
Length = 505
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 8/66 (12%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVP----TLNPYLDDHVRCIALGGV 103
SCG HSG+V NG+++ +GK G+LG GH + + P +L P D V+ IA G
Sbjct: 40 SCGEEHSGIVCKNGRVFCFGKNSFGQLGLGHTENVYKPNCVKSLKP---DKVKHIACGRS 96
Query: 104 HSIALT 109
H+I T
Sbjct: 97 HTIVST 102
>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G ++A VPT L +
Sbjct: 479 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEP 538
Query: 95 VRC-IALGGVHSIALTS 110
C +A G +IA T+
Sbjct: 539 NFCQVACGHSLTIARTT 555
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANLS--------VSKRFSNSS----SCGLFHSG-LVVNGKLWIWGKGDGGRLG 75
SP + QL N V + S SS +CG +H L +++ WGKG GRLG
Sbjct: 564 SPVYGQLGNPQSDGKLPARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLG 623
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D +P+L L D V+ IA G + A+
Sbjct: 624 HGDTDDKNLPSLVEALKDKQVKSIACGTNFTAAI 657
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 321 ACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGEYHTC 380
Query: 107 ALT 109
A+T
Sbjct: 381 AVT 383
>gi|357443735|ref|XP_003592145.1| Lateral signaling target protein-like protein [Medicago truncatula]
gi|355481193|gb|AES62396.1| Lateral signaling target protein-like protein [Medicago truncatula]
Length = 1238
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H + L +++ WGKG GRLG G + PTL L D HV+ IA G +S
Sbjct: 622 ACGAYHVTVLTSRNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSA 681
Query: 107 AL 108
A+
Sbjct: 682 AI 683
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 13/77 (16%)
Query: 47 SSSCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDD 93
S +CG++H+ +V +GKL+ WG GD RLG G +DA PT ++ +D
Sbjct: 505 SVACGVWHTAAIVEVIVTQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCISALIDY 564
Query: 94 HVRCIALGGVHSIALTS 110
+ IA G ++ LT+
Sbjct: 565 NFHRIACGHSLTVGLTT 581
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG+ H+ LV G+++ WG+ GGRLG G P L L V +A G H+
Sbjct: 348 ACGVKHAALVTRQGEMFTWGEESGGRLGHGVGKNVVQPCLVEALASSTVDFVACGEFHTC 407
Query: 107 ALT 109
A+T
Sbjct: 408 AVT 410
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VHS 105
CG +S ++ G L WG+G RLG G+ D +PTL L +H V +ALG HS
Sbjct: 690 CGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHS 749
Query: 106 IALTS 110
+ALTS
Sbjct: 750 LALTS 754
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L G+++ WG+G+ G+LG G+ + P L +L V IA G HS A+T+
Sbjct: 4325 ALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEHLHGMSVADIACGSAHSAAITA 4380
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P + +R +A G HS
Sbjct: 3167 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKKIRDVACGSSHSA 3226
Query: 107 ALTS 110
A++S
Sbjct: 3227 AISS 3230
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 3326 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 3385
Query: 108 LT 109
+T
Sbjct: 3386 VT 3387
>gi|302754826|ref|XP_002960837.1| hypothetical protein SELMODRAFT_402231 [Selaginella
moellendorffii]
gi|300171776|gb|EFJ38376.1| hypothetical protein SELMODRAFT_402231 [Selaginella
moellendorffii]
Length = 389
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 11/74 (14%)
Query: 15 AEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRL 74
+ AL LF + P +L N+ V+ CGLFHS L +++WGKGD GRL
Sbjct: 29 STPALDPSLFVEKAKP---RLGNVGVT--------CGLFHSVLFAEQDVFVWGKGDAGRL 77
Query: 75 GFGHEDAAFVPTLN 88
G E + P++N
Sbjct: 78 GIDTEFNQYKPSVN 91
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVH 104
S SCG H+ L G+++ WG G+GG LG G+ED P + L +V I GG+H
Sbjct: 1598 SVSCGSEHTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNVDFIVCGGLH 1657
Query: 105 SIALT 109
S+ LT
Sbjct: 1658 SLVLT 1662
>gi|255089166|ref|XP_002506505.1| predicted protein [Micromonas sp. RCC299]
gi|226521777|gb|ACO67763.1| predicted protein [Micromonas sp. RCC299]
Length = 401
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+ G+FH+ L +G+++ WG GD G+LG G PT L VR +A GG HS
Sbjct: 171 AAGMFHALALQEDGRVFSWGNGDYGQLGLGRPGNEDTPTEVEALSRAGVRSVAAGGWHSA 230
Query: 107 ALTSLAVEECNRCLILGEEEKRRL 130
A+T+ V C + G E RL
Sbjct: 231 AVTAGGV-----CYVWGRGEYGRL 249
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GK++ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4145 SCGFKHSAVVTADGKMFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4204
Query: 107 ALTS 110
A+++
Sbjct: 4205 AVST 4208
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4315 GDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTAPPV 4368
>gi|449475602|ref|XP_004154499.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101229506 [Cucumis sativus]
Length = 1079
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG +H L +++ WGKG GRLG G + PTL L D HV+ IA G +S
Sbjct: 517 ACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSA 576
Query: 107 AL---TSLAVEECNRC 119
A+ SL+ E ++C
Sbjct: 577 AICLHKSLSGTEQSQC 592
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ VV +GKL+ WG GD RLG G ++ PT P L D+
Sbjct: 402 ACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 461
Query: 96 RCIALGGVHSIALTS 110
IA G +I LT+
Sbjct: 462 HKIACGHSITIGLTT 476
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFG-HEDAAFVPTLNPYLDDHVRCIALGGVHSI 106
+CG HS ++ +G +++WG G+LG ++D AF L HV+ IA GG HS
Sbjct: 213 ACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQHVKFIAAGGAHSA 272
Query: 107 ALTS 110
ALT+
Sbjct: 273 ALTA 276
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 515 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 573
Query: 108 LT 109
L+
Sbjct: 574 LS 575
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCG HS +V +GKL+ +G GD GRLG G+ T N L + V C G H++A
Sbjct: 3678 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGN-------TSNKKLPERVAC---GLNHTLA 3727
Query: 108 LTS 110
+++
Sbjct: 3728 VSA 3730
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 547 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 598
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 599 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 653
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 3832 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 3890
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 456 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 515
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 516 AGYRHSAAVT 525
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVP 85
SCG HS +V +GKL+ +G GD GRLG G+ +P
Sbjct: 4126 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP 4163
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4300 ALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4358
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 3781 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 3840
Query: 107 ALTS 110
A+++
Sbjct: 3841 AVSA 3844
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PT+ L +VR I+ G HS A T+ V
Sbjct: 3946 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTGLQGKNVRQISAGRCHSAAWTAPPV 4004
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4132 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4191
Query: 107 ALTS 110
A+++
Sbjct: 4192 AVSA 4195
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4297 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4355
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4125 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4184
Query: 107 ALTS 110
A+++
Sbjct: 4185 AVSA 4188
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4290 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4348
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
paniscus]
Length = 4798
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4077 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4136
Query: 107 ALT 109
A++
Sbjct: 4137 AVS 4139
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4242 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4300
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4107 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4166
Query: 107 ALTS 110
A+++
Sbjct: 4167 AVSA 4170
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4272 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4330
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4138 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4197
Query: 107 ALTS 110
A+++
Sbjct: 4198 AVSA 4201
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4361
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4133 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4192
Query: 107 ALTS 110
A+++
Sbjct: 4193 AVSA 4196
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4298 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4356
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 107 ALTS 110
A+++
Sbjct: 4200 AVSA 4203
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWTAPPV 4363
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4137 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4196
Query: 107 ALTS 110
A++S
Sbjct: 4197 AVSS 4200
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4302 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4360
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 39 SVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHV 95
S+ K S+ S G H+ G+++ WG GD G+LG G+ P L P V
Sbjct: 456 SIRKVSSSKGSDG--HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV 513
Query: 96 RCIALGGVHSIALT 109
C++ G HS A+T
Sbjct: 514 VCVSAGYRHSAAVT 527
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Equus caballus]
Length = 4860
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4139 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4198
Query: 107 ALTS 110
A+++
Sbjct: 4199 AVST 4202
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.9 bits (89), Expect = 0.71, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4304 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4362
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4069 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4128
Query: 107 ALTS 110
A+++
Sbjct: 4129 AVSA 4132
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4234 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITILQGKNIRQISAGRCHSAAWTASPV 4292
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Meleagris gallopavo]
Length = 4334
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 3613 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTV 3672
Query: 107 ALT 109
A++
Sbjct: 3673 AVS 3675
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 40 VSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRC 97
+S F + G H+ L G ++ WG G+LG GH + PTL L ++R
Sbjct: 3761 LSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ 3820
Query: 98 IALGGVHSIALTSLAV 113
I+ G HS A T+ V
Sbjct: 3821 ISAGRCHSAAWTAPPV 3836
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 107 ALTS 110
A+++
Sbjct: 4200 AVSA 4203
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4305 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4363
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ H+ +A G H++
Sbjct: 4121 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTL 4180
Query: 107 ALTS 110
A+++
Sbjct: 4181 AVSA 4184
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVVEALQGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 44 FSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALG 101
F + + G H+ L +G+++ WG G+LG GH + PTL L ++R I+ G
Sbjct: 4273 FIDDIAVGAEHTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAG 4332
Query: 102 GVHSIALTSLAV 113
HS A T+ V
Sbjct: 4333 RCHSAAWTAAPV 4344
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
cuniculus]
Length = 4860
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4139 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4198
Query: 107 ALTS 110
A+++
Sbjct: 4199 AVSA 4202
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4304 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4362
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4149 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4208
Query: 107 ALTS 110
A+++
Sbjct: 4209 AVSA 4212
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4314 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4372
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4149 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4208
Query: 107 ALTS 110
A+++
Sbjct: 4209 AVSA 4212
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4314 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4372
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4138 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4197
Query: 107 ALTS 110
A+++
Sbjct: 4198 AVSA 4201
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4361
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 515 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 573
Query: 108 LT 109
L+
Sbjct: 574 LS 575
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 547 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 598
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 599 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 653
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVP 85
SCG HS +V +GKL+ +G GD GRLG G+ +P
Sbjct: 4142 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP 4179
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4317 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4375
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 456 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 515
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 516 AGYRHSAAVT 525
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4129 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4188
Query: 107 ALTS 110
A+++
Sbjct: 4189 AVSA 4192
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4294 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4352
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4135 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4194
Query: 107 ALTS 110
A+++
Sbjct: 4195 AVSA 4198
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4300 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4358
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4138 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4197
Query: 107 ALTS 110
A+++
Sbjct: 4198 AVSA 4201
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4361
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Felis catus]
Length = 4861
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 107 ALTS 110
A+++
Sbjct: 4200 AVSA 4203
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4305 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4363
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4133 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4192
Query: 107 ALT 109
A++
Sbjct: 4193 AVS 4195
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4298 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4356
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4139 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4198
Query: 107 ALTS 110
A+++
Sbjct: 4199 AVSA 4202
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4304 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4362
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4125 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4184
Query: 107 ALTS 110
A+++
Sbjct: 4185 AVSA 4188
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4290 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4348
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4132 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4191
Query: 107 ALTS 110
A+++
Sbjct: 4192 AVSA 4195
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4297 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4355
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 107 ALTS 110
A+++
Sbjct: 4200 AVSA 4203
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|356518818|ref|XP_003528074.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC4-like [Glycine max]
Length = 404
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 52 LFHSGLVVNGKLWI--WGKGDGGRLGFGHEDAAFVPTLNP-YLDDHVRCIALGGVHSIAL 108
L H L +GK ++ WG GD GRLG G+ D+ + P + P + D ++ IA GG H++ L
Sbjct: 9 LHHLSLRASGKRFVALWGNGDFGRLGLGNLDSQWKPVVCPAFRDRTLKAIACGGAHTLFL 68
Query: 109 T 109
T
Sbjct: 69 T 69
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFV--PTLNPYLDD-HVRCIALGGVH 104
S G HS + V+G+L++WGK +LG G V PT YL+ +++ ALG H
Sbjct: 111 SAGYNHSCAITVDGELYMWGKNTSVQLGLGKRAPNIVPLPTKVEYLNGINIKMAALGSDH 170
Query: 105 SIALT 109
S+A++
Sbjct: 171 SLAIS 175
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 107 ALTS 110
A+++
Sbjct: 4200 AVSA 4203
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCHSAAWTAPPV 4363
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4138 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4197
Query: 107 ALTS 110
A+++
Sbjct: 4198 AVSA 4201
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4361
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Nomascus leucogenys]
Length = 4855
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4134 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4193
Query: 107 ALTS 110
A+++
Sbjct: 4194 AVSA 4197
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4299 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4357
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4103 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4162
Query: 107 ALTS 110
A+++
Sbjct: 4163 AVSA 4166
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4268 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4326
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
gallus]
Length = 4860
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4139 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTV 4198
Query: 107 ALTS 110
A+++
Sbjct: 4199 AVST 4202
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Query: 40 VSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRC 97
+S F + G H+ L G ++ WG G+LG GH + PTL L ++R
Sbjct: 4287 LSGVFIEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQ 4346
Query: 98 IALGGVHSIALTSLAV 113
I+ G HS A T+ V
Sbjct: 4347 ISAGRCHSAAWTAPPV 4362
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 107 ALTS 110
A+++
Sbjct: 4200 AVSA 4203
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNP--YLDDHVRCIALGGVHS 105
SCG H G V VNG +W+WG + G+LG +A +P P + ++ ++ I GG H+
Sbjct: 568 SCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQDIKCGGSHT 627
Query: 106 IALTSLAV 113
+ L+ V
Sbjct: 628 VVLSCTGV 635
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG+ H+ V +G L+ WG G GRLG G +VPTL L V+ IA G H+ A
Sbjct: 677 CGIEHTAAVTESGCLYTWGNGSRGRLGHGDHQDRYVPTLVESLAYKQVQSIACGAYHTAA 736
>gi|345292925|gb|AEN82954.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292927|gb|AEN82955.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292935|gb|AEN82959.1| AT5G12350-like protein, partial [Capsella rubella]
Length = 169
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHS 105
+CG +HS V ++G L+ WGKGD G LG G+E + +VP +L + HV IA G H+
Sbjct: 37 ACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGMHVSSIACGPYHT 96
Query: 106 IALTS 110
+TS
Sbjct: 97 AVVTS 101
>gi|326431212|gb|EGD76782.1| hypothetical protein PTSG_08134 [Salpingoeca sp. ATCC 50818]
Length = 759
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 36 ANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
AN ++ +CG H+ ++ + G ++ +G + G+LG GH++ PTL P L +H
Sbjct: 51 ANFALDGEVIRKCACGDQHTVIIADSGHVFAFGANEWGQLGIGHQNKTHDPTLLPSLREH 110
Query: 95 -VRCIALGGVHSIALTS 110
V A G HS+ LTS
Sbjct: 111 VVTSAACGRNHSLFLTS 127
>gi|242016591|ref|XP_002428862.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
gi|212513605|gb|EEB16124.1| X-linked retinitis pigmentosa GTPase regulator, putative [Pediculus
humanus corporis]
Length = 516
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 13/80 (16%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVP----TLNPYLDDHVRCIALGGV 103
SCG H+ LV +G+++++GK D G+LGFGH P +L P+ HV C G
Sbjct: 42 SCGDEHTALVCKSGRVFLFGKNDFGQLGFGHTKIVNKPSCLKSLKPFQSIHVAC---GKS 98
Query: 104 HSIALTSLAVEECNRCLILG 123
H++ T ECN+ G
Sbjct: 99 HTLIST-----ECNKIFAFG 113
Score = 42.0 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 46 NSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
NS SCG +H+ + GK++ +G+ D G+LG + VP LD++ + GG H+
Sbjct: 195 NSISCGYYHTAFISLGKVYTFGEDDNGKLGRSDKLPNDVPE-GVELDENCISVKCGGSHT 253
Query: 106 IALT 109
I LT
Sbjct: 254 IILT 257
>gi|356534059|ref|XP_003535575.1| PREDICTED: uncharacterized protein LOC100783270 [Glycine max]
Length = 1120
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H L +++ WGKG GRLG G + PTL L D HV+ IA G +S
Sbjct: 559 ACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSA 618
Query: 107 AL 108
A+
Sbjct: 619 AI 620
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHV 95
+CG++H+ VV + KL+ WG GD RLG G +DA PT ++ +D +
Sbjct: 444 ACGVWHTAAVVEVIVTQSSASVSSDKLFTWGDGDKNRLGHGDKDARLEPTCVSLLIDSNF 503
Query: 96 RCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 504 HRIACGHSLTVGLTT 518
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSI 106
+CG+ H+ LV G+L+ WG+ GGRLG G P L V +A G H+
Sbjct: 285 ACGVKHAALVTRQGELFTWGEESGGRLGHGVGKNVIQPRLVEAMASTTVDFVACGEFHTC 344
Query: 107 ALT 109
A+T
Sbjct: 345 AVT 347
>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ +V + KL+ WG GD RLG G++DA +PT ++ +D + +
Sbjct: 430 ACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCVSSLIDYNFQ 489
Query: 97 CIALGGVHSIALTS 110
+A G ++ALT+
Sbjct: 490 QLACGHTMTVALTT 503
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG+ H LV G+++ WG+ GGRLG G ED P L L ++ +A G H+
Sbjct: 271 SCGVRHVALVTRQGEVFTWGEESGGRLGHGIEDHFTHPKLVESLAVTNIDYVACGEYHTC 330
Query: 107 ALTS 110
A+++
Sbjct: 331 AIST 334
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F SCG +H+ ++ + +++ WG+G G+LG G + +PTL L + HV+ ++ G
Sbjct: 539 FVEEISCGAYHTAVLTSRSEVFTWGRGANGQLGHGDTEDRKLPTLVEALKERHVKNLSCG 598
Query: 102 G 102
Sbjct: 599 A 599
>gi|224062918|ref|XP_002300931.1| predicted protein [Populus trichocarpa]
gi|222842657|gb|EEE80204.1| predicted protein [Populus trichocarpa]
Length = 1114
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + PTL L D HV+ IA G +S
Sbjct: 560 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDGEDRKTPTLVEALKDKHVKYIACGANYSA 619
Query: 107 AL 108
A+
Sbjct: 620 AI 621
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HV 95
+CG++H+ VV GKL+ WG GD RLG G ++ PT P L D +
Sbjct: 445 ACGVWHTAAVVEVIVTQSSSSVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDFNF 504
Query: 96 RCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 505 HKIACGHSLTVGLTT 519
Score = 36.2 bits (82), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG H+ +V G+++ WG+ GGRLG G P L L V IA G H+
Sbjct: 286 ACGFRHAAMVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAMTTVDFIACGEFHTC 345
Query: 107 ALT 109
A+T
Sbjct: 346 AVT 348
>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
Length = 1120
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG +H L +++ WGKG GRLG G + PTL L D HV+ IA G ++
Sbjct: 561 SCGAYHVVVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYTA 620
Query: 107 AL------TSLAVEECNRC 119
A+ +S +C+ C
Sbjct: 621 AICLHKWVSSAEQSQCSAC 639
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ VV GKL+ WG GD RLG G ++ PT P L D+
Sbjct: 446 ACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDF 505
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 506 HKVACGHSITVGLTT 520
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG+ H+ LV G+++ WG+ GGRLG G P + L + +A G H+
Sbjct: 287 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLAASSIGFVACGEFHTC 346
Query: 107 ALT 109
A+T
Sbjct: 347 AVT 349
>gi|345292929|gb|AEN82956.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292931|gb|AEN82957.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292933|gb|AEN82958.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292937|gb|AEN82960.1| AT5G12350-like protein, partial [Capsella rubella]
gi|345292939|gb|AEN82961.1| AT5G12350-like protein, partial [Capsella rubella]
Length = 169
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHS 105
+CG +HS V ++G L+ WGKGD G LG G+E + +VP +L + HV IA G H+
Sbjct: 37 ACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHT 96
Query: 106 IALTS 110
+TS
Sbjct: 97 AVVTS 101
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4138 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4197
Query: 107 ALTS 110
A+++
Sbjct: 4198 AVSA 4201
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4303 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4361
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|345292913|gb|AEN82948.1| AT5G12350-like protein, partial [Capsella grandiflora]
gi|345292917|gb|AEN82950.1| AT5G12350-like protein, partial [Capsella grandiflora]
gi|345292919|gb|AEN82951.1| AT5G12350-like protein, partial [Capsella grandiflora]
gi|345292921|gb|AEN82952.1| AT5G12350-like protein, partial [Capsella grandiflora]
gi|345292923|gb|AEN82953.1| AT5G12350-like protein, partial [Capsella grandiflora]
Length = 169
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHS 105
+CG +HS V ++G L+ WGKGD G LG G+E + +VP +L + HV IA G H+
Sbjct: 37 ACGEYHSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHT 96
Query: 106 IALTS 110
+TS
Sbjct: 97 AVVTS 101
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + PT+ L D V +A+G +H +A
Sbjct: 2307 CGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLA 2366
Query: 108 LT 109
+T
Sbjct: 2367 VT 2368
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIAL--GGVHSIALT 109
GKL+ G+G GRLG GH + P P+L +V + +A+ GG H++ALT
Sbjct: 2107 GKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALT 2158
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
L + ++ WG+GD G+LG G+ A P L L + + IA GG HS A+TS
Sbjct: 3132 ALSADNDVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITS 3187
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
S G L ++GK++ WG+G+ G+LG G+ P + L +R IA G HS A
Sbjct: 2149 SGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAA 2208
Query: 108 LTS 110
+TS
Sbjct: 2209 ITS 2211
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG HS + + G+L+ WGKG GRLG G + P L
Sbjct: 3176 ACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKL 3215
>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G ++ VPT L +
Sbjct: 475 AACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCVASLVEP 534
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 535 NFCQVACGHCFTVALTT 551
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 42 KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIA 99
K F SCG +H ++ + +++ WGKG GRLG G D PTL L D VR +
Sbjct: 585 KNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDKQVRSVV 644
Query: 100 LG 101
G
Sbjct: 645 CG 646
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + P L L ++ +A G H+
Sbjct: 317 SCGGRHATLVTKQGEVYSWGEESGGRLGHGVDCDVPQPKLIDALAHMNIELVACGEYHTC 376
Query: 107 ALT 109
A+T
Sbjct: 377 AVT 379
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 107 ALTS 110
A+++
Sbjct: 4200 AVSA 4203
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4305 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 4363
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4139 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4198
Query: 107 ALTS 110
A+++
Sbjct: 4199 AVSA 4202
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4304 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4362
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 107 ALTS 110
A+++
Sbjct: 4200 AVSA 4203
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Pan troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 107 ALT 109
A++
Sbjct: 4200 AVS 4202
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|355687448|gb|EHH26032.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 883
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 105 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNEFGQLGLG 159
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 160 HTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ 193
>gi|407399996|gb|EKF28499.1| hypothetical protein MOQ_007751 [Trypanosoma cruzi marinkellei]
Length = 644
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 51 GLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPT--LNPYLDDHVRCIALGGVHSIA 107
G +HSG++ G+L+ WG G GRLG G ++ A VPT V +A G H++A
Sbjct: 383 GQWHSGVINTAGELFTWGVGYQGRLGHGDKEPALVPTKVRGALTGQRVIDVACGSFHTVA 442
Query: 108 LTSLAVEEC 116
LT C
Sbjct: 443 LTERGAVYC 451
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Pongo abelii]
Length = 4864
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4143 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4202
Query: 107 ALTS 110
A+++
Sbjct: 4203 AVSA 4206
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4308 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4366
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 43 RFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL 100
R S CG +S + + G L+ WG+G+ GRLG G D +PT+ L DH V +AL
Sbjct: 692 RRVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVAL 751
Query: 101 GG--VHSIALTS 110
G H++ LT+
Sbjct: 752 GSGDAHTLCLTN 763
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R IA G HS
Sbjct: 3005 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSA 3064
Query: 107 ALTS 110
A++S
Sbjct: 3065 AISS 3068
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L +G+++ WG+G+ G+LG G+ + P L +L+ V IA G HS A+T+
Sbjct: 4171 ALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVADIACGSAHSAAITA 4226
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 3164 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLA 3223
Query: 108 LT 109
+T
Sbjct: 3224 VT 3225
>gi|114598774|ref|XP_001175007.1| PREDICTED: E3 ISG15--protein ligase HERC5-like, partial [Pan
troglodytes]
Length = 207
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 76 VGRKFPSTTTPQIVEHLAGVPLAQI-----SAGEAHSMALSMSGNIYSWGKNEFGQLGLG 130
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
H ++ P+L LD+ V +A GG HS LT
Sbjct: 131 HTESKDYPSLIEGLDNQKVEFVACGGSHSALLT 163
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ + L G
Sbjct: 48 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGE 104
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 105 AHSMALS 111
>gi|402874536|ref|XP_003901091.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 651
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 13/91 (14%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
+ P + L +R + G S+ALTS
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTS 631
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Anolis carolinensis]
Length = 4963
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 519 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 577
Query: 108 LT 109
L+
Sbjct: 578 LS 579
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 551 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 602
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 603 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 657
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4231 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTL 4290
Query: 107 ALTS 110
+++
Sbjct: 4291 VVST 4294
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 39 SVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVR 96
++S F + G H+ L +G ++ WG G+LG GH + PTL L VR
Sbjct: 4378 ALSGVFVEDIAVGAEHTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVR 4437
Query: 97 CIALGGVHSIALTSLAV 113
I+ G HS A +S V
Sbjct: 4438 QISAGRCHSAAWSSPPV 4454
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 460 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 519
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 520 AGYRHSAAVT 529
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
>gi|403355741|gb|EJY77458.1| hypothetical protein OXYTRI_00911 [Oxytricha trifallax]
Length = 922
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 50 CGLFHSG-LVVNGKLWIWGKG----DGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
CG FHS L NG L+ WG G + G+ G GH +A P YL + +A GG
Sbjct: 320 CGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPEKVKYLSSKRIVKVACGGF 379
Query: 104 HSIALTS 110
H++ALTS
Sbjct: 380 HTLALTS 386
>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
distachyon]
Length = 1007
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++HS +V + KL+ WG GD RLG G ++A VPT + +D++
Sbjct: 419 ACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVDNNFH 478
Query: 97 CIALGGVHSIALTS 110
+A G +IAL +
Sbjct: 479 QVACGYSMTIALAT 492
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 29 SPNWNQLANLS------------VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
S N+ QL N +S SCG +H ++ + +++ WG G GRLG
Sbjct: 501 SSNYGQLGNPKADGKQPCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWGMGANGRLG 560
Query: 76 FGHEDAAFVPTLNPYLDD-HVRCIALG 101
G + PT+ L D HV+ IA G
Sbjct: 561 HGGIEDKKKPTIVDALKDRHVKSIACG 587
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG H L G+++ WG+ GGRLG G ++ P L L +V IA G H+
Sbjct: 260 SCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTC 319
Query: 107 ALTS 110
A+T+
Sbjct: 320 AVTA 323
>gi|328712156|ref|XP_001946936.2| PREDICTED: serine/threonine-protein kinase Nek8-like [Acyrthosiphon
pisum]
Length = 516
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVPTLNPYLDDHVRCIALGGVHSI 106
SCG +H + N G+L+ WG+G+ G+LG G+ +D F +N +LD+ + I G +
Sbjct: 264 SCGNYHLAALTNEGQLYTWGRGNHGQLGLGNLQDCCFPILVNWHLDEKIGSIKCGPECTA 323
Query: 107 ALTSLA-VEEC--NRCLILG 123
+T V C N+C LG
Sbjct: 324 VITDCQNVYACGLNKCNKLG 343
>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 964
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G ++ VPT L +
Sbjct: 347 AACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEP 406
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 407 NFCQVACGHCLTVALTT 423
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 42 KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIA 99
K F SCG +H ++ + +++ WGKG GRLG G + PTL L D VR +
Sbjct: 457 KNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDKQVRNVV 516
Query: 100 LG 101
G
Sbjct: 517 CG 518
>gi|359081977|ref|XP_003588239.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like [Bos
taurus]
Length = 338
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
NSE + N+ V + + SCG +HS V G+L+ +G+ + G+LG
Sbjct: 73 NSEGQIGLQNITNICVPHQVTIGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPP 132
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ VP L P + + V +A GG H++ LT AV
Sbjct: 133 KLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKAV 169
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG FHS L ++G ++ WGK D G+LG G+++ PTL + V+ IA G H+
Sbjct: 201 ACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTA 260
Query: 107 ALTS 110
LT+
Sbjct: 261 MLTA 264
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG FHS L ++G ++ WGK D G+LG G+++ PTL + V+ IA G H+
Sbjct: 541 ACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQMVKHIACGQDHTA 600
Query: 107 ALTS 110
LT+
Sbjct: 601 MLTA 604
>gi|297810989|ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
gi|297319215|gb|EFH49637.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
+WG GD GRLG G+ D+ + P L DH +R +A GG H++ LT
Sbjct: 53 MWGSGDYGRLGLGNLDSQWTPAGCSALSDHSIRAVACGGAHTLFLT 98
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF--VPTLNPYLDD-HVRCIALGGVH 104
S G +HS + V+G+L++WGK G+LG G + A VPT L ++ +ALG H
Sbjct: 140 SAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEH 199
Query: 105 SIALT 109
S+A+T
Sbjct: 200 SVAVT 204
>gi|301121636|ref|XP_002908545.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262103576|gb|EEY61628.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 677
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG H+GLV + G+ + WG GDGGRLG G + P L L D + +A HS+
Sbjct: 352 TCGAMHAGLVTSEGQAYTWGSGDGGRLGHGDNISYVNPKLVEALKTDIIVELACACWHSV 411
Query: 107 AL 108
A+
Sbjct: 412 AV 413
>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
Length = 1020
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVVNG-----------KLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CGL+HS +V KL+ WG GD +LG G +D+ VPT + +D
Sbjct: 420 ACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFH 479
Query: 97 CIALGGVHSIALTS 110
+A G +IAL++
Sbjct: 480 QVACGHSMTIALST 493
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
SCG H ++ + +++ WG G GRLG G + PTL L D HV+ IA G
Sbjct: 534 SCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACG 588
>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
Length = 477
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G++HS ++ + G +++WG G+ G+LGFG + +DD V CIA G H+
Sbjct: 136 SAGMYHSCVLTDKGSVYLWGGGEEGQLGFGEDVTKHETPERLDVDDEVVCIACGYYHTAL 195
Query: 108 LTSLAVEECNRCLILGEEEKRRL 130
+T+ + L GE ++ +L
Sbjct: 196 VTA-----GGKLLTFGETDEGKL 213
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA-FVPTLNPYLDDHVRCIALGGVHSI 106
+CG +H+ LV GKL +G+ D G+LG G + +P + ++ HV +A GG H++
Sbjct: 187 ACGYYHTALVTAGGKLLTFGETDEGKLGRGSDTGDNCLPKVVDGIEGHVVSVACGGAHTV 246
Query: 107 ALT 109
A+T
Sbjct: 247 AIT 249
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 47 SSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPT----LNPYLDDHVRCIA 99
S+SCG H+ LV + G+LW G G G+L G E+ A F P + ++ + V C
Sbjct: 289 SASCGENHTALVTDRGQLWTCGDGRHGKLALGEENFANQFKPCHSVRFSKFVVEQVSC-- 346
Query: 100 LGGVHSIALTSLAVEECNRCLILGEEE 126
GG H++A +++ N +EE
Sbjct: 347 -GGCHTLATGKPSLQNGNAAHDSSDEE 372
>gi|355749435|gb|EHH53834.1| E3 ISG15--protein ligase HERC5 [Macaca fascicularis]
Length = 854
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 97 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNEFGQLGLG 151
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 152 HTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ 185
>gi|147791382|emb|CAN65617.1| hypothetical protein VITISV_032298 [Vitis vinifera]
Length = 461
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
SCG +H+ + NG+++ WG G+ G+LG + D VP LD ++ IA GGV
Sbjct: 232 SCGEYHTAAISENGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISIKDIACGGV 291
Query: 104 HSIALTS 110
H+ ALTS
Sbjct: 292 HTCALTS 298
>gi|145539346|ref|XP_001455363.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423171|emb|CAK87966.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 42 KRFSNSSS---CGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH--- 94
K F+N+ + G HS L+ + G+L+ WG G+ G+LG ++ P L + H
Sbjct: 45 KGFNNNVAQVQMGQNHSALITSEGELYTWGTGNSGQLGHNNDKDYITPQLVEFFTKHNLK 104
Query: 95 VRCIALGGVHSIALT 109
V+ +ALG H++ALT
Sbjct: 105 VKQVALGDYHTVALT 119
>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
Full=Cyclin-E-binding protein 1; AltName: Full=HECT
domain and RCC1-like domain-containing protein 5
gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 172 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNECGQLGLG 226
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 227 HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ 260
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ + L G
Sbjct: 144 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 201 AHSMALS 207
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 29 SPNWNQLANLSVSKRFSN------------SSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N + R+ +CG +H ++ N G+++ WGKG GRLG
Sbjct: 509 SPVYGQLGNPNNDGRYPRLVEEQLGGGGVVEVACGSYHVAVLTNAGEVYTWGKGTNGRLG 568
Query: 76 FGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIAL------TSLAVEECNRC 119
G VPTL L D V+ +A G + A+ + + +C+ C
Sbjct: 569 HGDIADRKVPTLVEALKDRSVKRVACGSSFTAAICQHKWVSGMEQSQCSAC 619
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 47 SSSCGLFHSGLVV----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
S SCG++H+ VV +GKL+ WG GD RLG G + PT P L D+
Sbjct: 426 SVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDYNF 485
Query: 96 RCIALGGVHSIALTS 110
A G +I LT+
Sbjct: 486 HKAACGHTLTIGLTT 500
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG+ H+ LV +++ WG+ GRLG G F P L L +V IA G H+
Sbjct: 269 ACGVKHAALVTRQAEVFTWGEECSGRLGHGIGTNVFQPRLVESLSTCNVELIACGEFHTC 328
Query: 107 ALTS 110
A+T+
Sbjct: 329 AVTA 332
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTSLAVEEC 116
+G+++ WG D G+LG G D VP L L +H ++ +A G HSIA T + C
Sbjct: 874 DGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKYVACGSSHSIAWTEITTSAC 931
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 34 QLANLSVSKRFSNSSSCGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD 92
QL L + K CG F L G +W WGKGD RLG G + P L L
Sbjct: 800 QLRGLQICKIL-----CGAQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEGLR 854
Query: 93 -DHVRCIALGGVHSIALTS 110
HV IA+G +H +A+T
Sbjct: 855 GKHVIDIAVGALHCLAVTQ 873
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 43 RFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPY-LDDHVRCIAL 100
+ S SCG H + + G+++ WG D G+LG G A PTLN + L+ + I+
Sbjct: 1739 KIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRISC 1798
Query: 101 GGVHSIALTSLAVEE 115
G H+IA ++ E
Sbjct: 1799 GSAHTIAWSTSKASE 1813
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 49 SCGLFHSGLVVNGK-LWIWGKGDGGRLGFGHEDAAFVP 85
SCG HS +V K L+ WG GD GRLG G E+ P
Sbjct: 704 SCGSAHSAAIVENKYLYTWGLGDFGRLGHGDEETILQP 741
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
K +N + G + + +NG+L+ WGKG GRLG G D P
Sbjct: 1581 KIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKP 1624
>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
Length = 1858
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIAL 108
G +HS L +G+++ WG G G+LG G+ D PTL L +R I G H++AL
Sbjct: 930 GQYHSVALTSDGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGIVIRFITAGHAHTLAL 989
Query: 109 TSLAVEECNRCLILGE 124
++ + C I G+
Sbjct: 990 STEGIIYAFGCNIFGQ 1005
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGG-VHS 105
S SCG H+ V N ++ WG G+LG G P L L V A+ G HS
Sbjct: 875 SVSCGHCHTLAVTNNGVYAWGSSQFGQLGLGKILQCSTPELITSLAQEVIIDAVAGQYHS 934
Query: 106 IALTS 110
+ALTS
Sbjct: 935 VALTS 939
>gi|403352385|gb|EJY75705.1| hypothetical protein OXYTRI_02905 [Oxytricha trifallax]
Length = 923
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 50 CGLFHSG-LVVNGKLWIWGKG----DGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
CG FHS L NG L+ WG G + G+ G GH +A P YL + +A GG
Sbjct: 320 CGDFHSAALDGNGDLYTWGGGAPSYNKGQCGHGHNNALEYPEKVKYLSSKRIIKVACGGF 379
Query: 104 HSIALTS 110
H++ALTS
Sbjct: 380 HTLALTS 386
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G +++ VPT L +
Sbjct: 477 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEP 536
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 537 NFCQVACGHCLTVALTT 553
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIA 99
K F SCG +H ++ + +++ WGKG GRLG G+ D PTL L D VR +
Sbjct: 587 KNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDKQVRNVV 646
Query: 100 LGGVHSIAL 108
G + A+
Sbjct: 647 CGTNFTAAI 655
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + D A ++ ++ +A G H+
Sbjct: 319 SCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDALTHMNIELVACGEYHTC 378
Query: 107 ALT 109
A+T
Sbjct: 379 AVT 381
>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 172 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNECGQLGLG 226
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 227 HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ 260
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ + L G
Sbjct: 144 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 201 AHSMALS 207
>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
Length = 1024
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 172 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSTALSMSGNIYSWGKNECGQLGLG 226
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 227 HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ 260
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ + L G
Sbjct: 144 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 103 VHSIALT 109
HS AL+
Sbjct: 201 AHSTALS 207
>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
Length = 1024
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 172 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNECGQLGLG 226
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 227 HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ 260
Score = 36.6 bits (83), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ + L G
Sbjct: 144 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 201 AHSMALS 207
>gi|66816277|ref|XP_642148.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470255|gb|EAL68235.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 831
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 28 NSPNWNQLANLSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT 86
N N+ + L + SCG+ H+G + G L+++G G G+LG G + PT
Sbjct: 28 NQDNYTGIPTLLPNYYNVKKVSCGVQHTGFITGTGNLYMFGNGSFGKLGTGDTEDRSEPT 87
Query: 87 LNPYLDDHVRCIALGGVHSIALTS 110
L ++ +R + G HSIALTS
Sbjct: 88 LVE-MNHSIRDLQCGNDHSIALTS 110
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 171 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNVYSWGKNEFGQLGLG 225
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 226 HTESKDSPSLIEALDNQKVEFLACGGSHSALLTQ 259
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ + L G
Sbjct: 143 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGE 199
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 200 AHSMALS 206
>gi|7573415|emb|CAB87718.1| putative protein [Arabidopsis thaliana]
Length = 541
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 41 SKRFSN--SSSCGLFHSGLVVNG--KLWIWGKGDGGRLGFGHEDAAFVPTL 87
S RF + SCG H+ LVV+G KLW WG+G G LG G+ +VPTL
Sbjct: 367 SSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTL 417
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL----NPYLDDHVRC--IALGGVHSIALT 109
L +G ++ WG+G GRLG G E VP L N D +R +A G HS+A++
Sbjct: 31 LTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGDRIRIVGVAAGAYHSLAVS 89
>gi|291539013|emb|CBL12124.1| Fibronectin type III domain./Regulator of chromosome condensation
(RCC1) repeat [Roseburia intestinalis XB6B4]
Length = 1546
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HSG + +G L++WG D G++G G + + PT + DHV ++LG HS A
Sbjct: 841 SLGYCHSGAITQDGSLYMWGSNDSGQIGDGTTEDRYKPT---KILDHVIAVSLGVSHSGA 897
Query: 108 LT 109
+T
Sbjct: 898 IT 899
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HSG + +G L++WG+ G +G G E+ + PT + DHV ++LG HS A
Sbjct: 985 SLGDDHSGAITQDGSLYMWGRNYYGEIGDGTEEDRYKPT---KILDHVIAVSLGVGHSGA 1041
Query: 108 LT 109
+T
Sbjct: 1042 IT 1043
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S S G ++SG + +G L++WG G++G G + + PT + DHV ++LG HS
Sbjct: 791 SVSLGDYYSGAITQDGSLYMWGSNVYGQIGDGTTEDRYKPT---KILDHVIAVSLGYCHS 847
Query: 106 IALT 109
A+T
Sbjct: 848 GAIT 851
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 54 HSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
+SG + +G L++WG G +G G E+ + PT + DHV ++LG HS A+T
Sbjct: 942 NSGAITQDGSLYMWGSNVYGEIGDGTEEDRYKPT---KILDHVIAVSLGDDHSGAIT 995
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 49 SCGLFHSGLVVN--GKLWIWGKGDGGRLGFGH-EDAAFVPTLNPYLDDH-VRCIALGGVH 104
SCG HS L VN G+++ WG GDGG+LG G E+A VP L L +H + + G H
Sbjct: 90 SCGQAHS-LAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHH 148
Query: 105 SIALT 109
IAL+
Sbjct: 149 CIALS 153
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG H+ ++ + G+++ WG+GD GRLG G FVP L L ++R + G H+
Sbjct: 40 ACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTA 99
Query: 107 ALT 109
A+T
Sbjct: 100 AVT 102
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H+ V V+G L+ WG G G+LG G+E P L L VR +A G H++
Sbjct: 92 TCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTV 151
Query: 107 AL 108
L
Sbjct: 152 VL 153
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSI 106
+CG FH+ V G+++ WG G+ G+LG G + VPT + ++ V I G H++
Sbjct: 249 ACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTV 308
Query: 107 ALT 109
ALT
Sbjct: 309 ALT 311
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 512 SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 570
Query: 108 LT 109
L+
Sbjct: 571 LS 572
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ H V +A G H++
Sbjct: 4125 SCGFKHSAVVTSDGKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTL 4184
Query: 107 ALTS 110
A+++
Sbjct: 4185 AVSA 4188
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 544 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 595
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 596 RVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 650
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4144 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4203
Query: 107 ALTS 110
A+++
Sbjct: 4204 AVSA 4207
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 4309 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITVLQGKNIRQISAGRCHSAAWTASPV 4367
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A++
Sbjct: 518 AGYRHSAAVS 527
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGG--VH 104
SCG HS V VNG+L+ WG+G GRLG G + P L L+ + C+A G H
Sbjct: 3070 SCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISCVACGSRNAH 3129
Query: 105 SIA 107
++A
Sbjct: 3130 TLA 3132
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGV 103
S G HS V +G L+ WGKG GRLG G+ + +PT+ L+ V C G
Sbjct: 566 SAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDC-GSGDA 624
Query: 104 HSIAL 108
H++AL
Sbjct: 625 HTLAL 629
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIA 107
CG+ S L+ GK++ WGKG+ RLG +PTL + + +A+G +H +A
Sbjct: 3176 CGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLA 3235
Query: 108 LTS 110
LTS
Sbjct: 3236 LTS 3238
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L +GK++ WG+G G LG G+ ++ PT L D + I+ G +HS A+T V
Sbjct: 522 ALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGV 580
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 48 SSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHS 105
+ CG HS + + G L+ WGKG GRLG + P L L + V C+A G +
Sbjct: 3980 AGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQVTCVACGSGDA 4039
Query: 106 IALTSLA 112
L + A
Sbjct: 4040 QTLCATA 4046
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALTS 110
L +GKL+ WG GD +LG G+++ P L L + V +++G H +ALT+
Sbjct: 681 ALTKDGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVVSDVSVGAQHCVALTT 736
>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
Length = 1765
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 37 NLSVSKRFSNS-----SSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY 90
NL + +R ++ + G HS +G LW WG G GRLG GH + P + Y
Sbjct: 241 NLGIGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDY 300
Query: 91 -LDDHVRCIALGGVHS 105
LD V ++ G HS
Sbjct: 301 ILDRDVVFVSAGDSHS 316
Score = 38.9 bits (89), Expect = 0.75, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH--EDAAFVPTLNPYLDDHVRCIALGGV 103
S CG H+ L G +W+WG D G+LG G E+ + P +R IA G
Sbjct: 505 SLGCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIACGSK 564
Query: 104 HSIAL 108
H +A+
Sbjct: 565 HCLAV 569
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVH 104
+ S G H+ + G+ + WG G GRLG G A+ PT + +R +A G H
Sbjct: 677 ACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASH 736
Query: 105 SIALT 109
S+AL+
Sbjct: 737 SLALS 741
>gi|302804166|ref|XP_002983835.1| hypothetical protein SELMODRAFT_423074 [Selaginella moellendorffii]
gi|300148187|gb|EFJ14847.1| hypothetical protein SELMODRAFT_423074 [Selaginella moellendorffii]
Length = 506
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLA 112
G + ++WGKGDGGRLG E + P +N + V+ + GG+H+IALT +
Sbjct: 97 GALCRAGCFVWGKGDGGRLGIDTEFNQYKPYVNIRI-KRVQMASAGGLHNIALTEVG 152
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGH 78
NSE N ++N+ V ++ + SCG +HS V + GKL+ +G+ + G+LG
Sbjct: 163 NSEGQIGLNSISNVYVPRQVTVGKPISWISCGYYHSAFVTMEGKLYTFGEPECGKLGLPS 222
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
E P L + + V +A GG H++ LT AV
Sbjct: 223 EQLINHRKPQLVSGISEKVIQVACGGGHTVVLTEKAV 259
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDH-VRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ FVPTL + + +A GG H
Sbjct: 297 SCGENHTALITDVGHMYTFGDGRHGKLGLGLENFTNQFVPTLCSHFSKFIIHLVACGGCH 356
Query: 105 SI 106
+
Sbjct: 357 ML 358
Score = 35.0 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
SCG H+ L+ N KL+++G + G+LG G + A + P L + V+ A G H++
Sbjct: 37 SCGDEHTALITGNNKLYMFGSNNWGQLGLGSKSAVYRPICVKALKSEKVKLAACGRNHTL 96
Query: 107 ALT 109
T
Sbjct: 97 VST 99
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG HS L V+GK++ WG+G G+LG G +P L DH V IA GG H++
Sbjct: 199 ACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHDVIQIACGGDHTL 258
Query: 107 ALTS 110
A+TS
Sbjct: 259 AITS 262
>gi|18416604|ref|NP_568250.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|16604485|gb|AAL24248.1| AT5g11580/F15N18_170 [Arabidopsis thaliana]
gi|18958034|gb|AAL79590.1| AT5g11580/F15N18_170 [Arabidopsis thaliana]
gi|332004314|gb|AED91697.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 553
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 41 SKRFSN--SSSCGLFHSGLVVNG--KLWIWGKGDGGRLGFGHEDAAFVPTL 87
S RF + SCG H+ LVV+G KLW WG+G G LG G+ +VPTL
Sbjct: 379 SSRFRDPVQVSCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTL 429
>gi|356495400|ref|XP_003516566.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 432
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 40 VSKRFSNSSSCGLFHSGLVV-----NGKLWIWGKGDGGRLGFG-HEDAAFVPT-LNPYLD 92
V N + CG F SG+V +G +W+WGK G+LG G H A VPT L
Sbjct: 103 VKGLLENVNVCGAFASGVVSAALGDDGSVWVWGKSKRGQLGLGQHITEAVVPTKLEALSR 162
Query: 93 DHVRCIALGGVHSIALTS 110
++V +A G H++A TS
Sbjct: 163 ENVAKVAFGWGHALARTS 180
>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
Length = 1064
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VR 96
+CG++HS +V + KL+ WG GD RLG G ++A VPT L DH
Sbjct: 440 ACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH 499
Query: 97 CIALGGVHSIALTS 110
+A G ++AL +
Sbjct: 500 QVACGHSMTVALAT 513
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 49 SCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
SCG H + L +++ WG G GRLG G + PTL L D HV+ I+ G
Sbjct: 554 SCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCG 608
>gi|22770461|gb|AAN06607.1| chromosome condensation regulator protein [Cicer arietinum]
Length = 358
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 49 SCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H + L +++ WGKG GRLG G + +PTL L D HV+ IA G +S
Sbjct: 143 ACGAYHVTVLTSKNEVYTWGKGANGRLGHGDIEDRKMPTLVEALKDRHVKYIACGSNYSA 202
Query: 107 AL 108
A+
Sbjct: 203 AI 204
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 13/77 (16%)
Query: 47 SSSCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDD 93
+ +CG++H+ +V +GKL+ WG GD RLG G +DA PT ++ +D
Sbjct: 26 AGACGVWHTAAIVEVIVAQSSASISSGKLFTWGDGDKNRLGHGDKDARLEPTCVSALIDY 85
Query: 94 HVRCIALGGVHSIALTS 110
+ IA G ++ LT+
Sbjct: 86 NFHRIACGHSLTVGLTT 102
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSI 106
+CG HS +V +G+L+++G D G+LG GH + P+ + P + VR +A G H+I
Sbjct: 44 ACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTI 103
Query: 107 ALT 109
+
Sbjct: 104 VYS 106
>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
Length = 1038
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VR 96
+CG++HS +V + KL+ WG GD RLG G ++A VPT L DH
Sbjct: 426 ACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH 485
Query: 97 CIALGGVHSIALTS 110
+A G ++AL +
Sbjct: 486 QVACGHSMTVALAT 499
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 49 SCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
SCG H + L +++ WG G GRLG G + PTL L D HV+ I+ G
Sbjct: 540 SCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCG 594
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 524 SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 582
Query: 108 LT 109
L+
Sbjct: 583 LS 584
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ HV +A G H++
Sbjct: 4215 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPEKVTALEGYHVGQVACGLNHTL 4274
Query: 107 ALTS 110
+++
Sbjct: 4275 VVSA 4278
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 556 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 607
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 608 RVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 662
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 465 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 524
Query: 100 LGGVHSIALT 109
G HS A++
Sbjct: 525 AGYRHSAAVS 534
>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
Length = 1002
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VR 96
+CG++HS +V + KL+ WG GD RLG G ++A VPT L DH
Sbjct: 390 ACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH 449
Query: 97 CIALGGVHSIALTS 110
+A G ++AL +
Sbjct: 450 QVACGHSMTVALAT 463
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 49 SCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
SCG H + L +++ WG G GRLG G + PTL L D HV+ I+ G
Sbjct: 504 SCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDRHVKSISCG 558
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 527 SAGYRHSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 585
Query: 108 LT 109
L+
Sbjct: 586 LS 587
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 559 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 610
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 611 RVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 665
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 468 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 527
Query: 100 LGGVHSIALT 109
G HS A++
Sbjct: 528 AGYRHSAAVS 537
>gi|255080574|ref|XP_002503867.1| predicted protein [Micromonas sp. RCC299]
gi|226519134|gb|ACO65125.1| predicted protein [Micromonas sp. RCC299]
Length = 1066
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 17/82 (20%)
Query: 42 KRFSNSSSCGLFHSGLVV----------NGKLWIWGKGDGGRLGFG----HEDAAFVPTL 87
+R SN S CG++H+ V G+LW WG DGG+LG G E A P
Sbjct: 444 RRVSNVS-CGVYHTAAVAIDRTTTGCAGRGELWTWGDADGGKLGHGAEAAKEKAVVAPRR 502
Query: 88 NPYLDDH--VRCIALGGVHSIA 107
LD++ V ++ G H++A
Sbjct: 503 VSGLDENADVTTVSCGQWHTLA 524
>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
Length = 1104
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANL------------SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLG 75
SP + QL N +SK F +CG +H L +++ WGKG GRLG
Sbjct: 559 SPVYGQLGNPLADGKLPTRVEGKLSKSFVEEIACGAYHVAVLTSKTEVYTWGKGANGRLG 618
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D P+L L D V+ IA G + A+
Sbjct: 619 HGDTDDRNSPSLVEALKDKQVKSIACGTSFTAAI 652
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ V+ GKL+ WG GD GRLG G ++A VPT L +
Sbjct: 474 AACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEP 533
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++A T+
Sbjct: 534 NFCQVACGHSLTVARTT 550
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 316 ACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVMHPKLIDALSNTNIELVACGEYHTC 375
Query: 107 ALT 109
A+T
Sbjct: 376 AVT 378
>gi|13548329|emb|CAC35876.1| putative protein [Arabidopsis thaliana]
Length = 435
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
+WG GD GRLG G+ D+ + P + L DH + +A GG H++ LT
Sbjct: 53 MWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLT 98
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF--VPTLNPYLDD-HVRCIALGGVH 104
S G +HS + V+G+L++WGK G+LG G + A VPT L ++ +ALG H
Sbjct: 150 SAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEH 209
Query: 105 SIALT 109
S+A+T
Sbjct: 210 SVAVT 214
>gi|449443826|ref|XP_004139677.1| PREDICTED: uncharacterized protein LOC101214149 [Cucumis sativus]
Length = 1118
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + PTL L D HV+ IA G +S
Sbjct: 556 ACGAYHVMVLTSKNEVYTWGKGANGRLGHGDVEDRKSPTLVESLKDKHVKIIACGSNYSA 615
Query: 107 AL---TSLAVEECNRC 119
A+ SL+ E ++C
Sbjct: 616 AICLHKSLSGTEQSQC 631
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ VV +GKL+ WG GD RLG G ++ PT P L D+
Sbjct: 441 ACGVWHTAAVVEVIMTQSSTSIPSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYNF 500
Query: 96 RCIALGGVHSIALTS 110
IA G +I LT+
Sbjct: 501 HKIACGHSITIGLTT 515
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG+ HS +V G+++ WG+ GGRLG G P L L V +A G H+
Sbjct: 282 ACGVRHSAIVTRQGEVFTWGEETGGRLGLGMGKDVTQPRLVEALAATTVDLVACGEFHTC 341
Query: 107 ALT 109
A+T
Sbjct: 342 AVT 344
>gi|168018623|ref|XP_001761845.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686900|gb|EDQ73286.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1131
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG G+ GRLG G ++ VPT L DH
Sbjct: 476 AACGVWHTAAVVEVMVGSSSAGSCSSGKLFTWGDGEKGRLGHGDKEQRLVPTCVAALVDH 535
Query: 95 -VRCIALGGVHSIALTS 110
R +A G ++ALT+
Sbjct: 536 NFRQVACGYSLTVALTT 552
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG H ++ N +++ WGKG GRLG G + PTL L + V+ IA G +
Sbjct: 593 ACGAHHVAVLTHNSEVYTWGKGANGRLGHGDLEDRNTPTLVEALKEKQVKSIACGATFTA 652
Query: 107 AL 108
A+
Sbjct: 653 AI 654
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAA-FVPTLNPYLD-DHVRCIALGGVHS 105
+ G +HS L +G+++ WG+G+ GRLGFG + ++ VP LD + + ++ GG HS
Sbjct: 258 AAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDGEDIVQVSCGGTHS 317
Query: 106 IALTS 110
+ALTS
Sbjct: 318 VALTS 322
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 49 SCGLFHSGLV--VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSI 106
+CG +GL+ G+L+ +G G+ G+LG G P++ P D+V+ +A GG H +
Sbjct: 250 TCGTDFTGLLNETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPL--DNVKEVAAGGAHML 307
Query: 107 ALT 109
ALT
Sbjct: 308 ALT 310
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAF----VPTLNPYLDDHVRCIALGGVHSIALT 109
L +G+ W WG G+ GRLG G + +PTL P + V ++ GG HS+ALT
Sbjct: 308 ALTKDGQAWSWGWGEDGRLGHGATEDFLKPEPIPTLGPAVG--VVSVSAGGGHSLALT 363
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGV-H 104
S S G HS L +G+++ WG GRLG G+E + PTL L D A+ G+ H
Sbjct: 351 SVSAGGGHSLALTESGQVYGWGFNASGRLGLGNESSVMTPTLIKALADKRVLRAICGLDH 410
Query: 105 SIALT 109
S+ +T
Sbjct: 411 SLFIT 415
>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 434
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
+WG GD GRLG G+ D+ + P + L DH + +A GG H++ LT
Sbjct: 53 MWGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLT 98
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF--VPTLNPYLDD-HVRCIALGGVH 104
S G +HS + V+G+L++WGK G+LG G + A VPT L ++ +ALG H
Sbjct: 140 SAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEH 199
Query: 105 SIALT 109
S+A+T
Sbjct: 200 SVAVT 204
>gi|242077750|ref|XP_002448811.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
gi|241939994|gb|EES13139.1| hypothetical protein SORBIDRAFT_06g033680 [Sorghum bicolor]
Length = 879
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 11/75 (14%)
Query: 47 SSSCGLFHSGLVV----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
S SCG++H+ VV +GKL+ WG GD RLG G + PT P L D+
Sbjct: 241 SVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCIPSLIDYNF 300
Query: 96 RCIALGGVHSIALTS 110
A G +I LT+
Sbjct: 301 HKAACGHTLTIGLTT 315
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ N G+++ WGKG GRLG G VPTL L D V+ +A G +
Sbjct: 356 ACGSYHVAVLTNAGEVYTWGKGANGRLGHGDIADRKVPTLVEALRDRSVKRVACGSSFTA 415
Query: 107 AL------TSLAVEECNRC 119
A+ + + +C+ C
Sbjct: 416 AICQHKWVSGMEQSQCSAC 434
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG+ H+ LV +++ WG+ GRLG G F P L L +V IA G H+
Sbjct: 84 ACGVKHAALVTRQSEVFTWGEECSGRLGHGTGTNVFQPRLVESLSICNVELIACGEFHTC 143
Query: 107 ALTS 110
A+T+
Sbjct: 144 AVTA 147
>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
aries]
Length = 1137
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 16/101 (15%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGF-- 76
NSE + N+ V + + SCG +HS V G+L+ +G+ + G+LG
Sbjct: 193 NSEGQIGLQNITNMCVPHQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPP 252
Query: 77 ----GHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
H+ VP L P + + V +A GG H++ LT AV
Sbjct: 253 KLLVNHK----VPQLVPGISEKVIQVACGGGHTVVLTEKAV 289
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 39 SVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDH 94
SV + + CG H+ L+ +G L+ +G G G+LG G E+ A F+PTL + +L
Sbjct: 317 SVKDKKISHVCCGENHTALITESGLLYTFGDGRHGKLGLGMENFANQFLPTLCSNFLKYI 376
Query: 95 VRCIALGGVHSIALTS 110
V +A GG H + +
Sbjct: 377 VHLVACGGCHMLVFAT 392
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 49 SCGL-FHSGLVV--NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALG 101
SCG+ F L NG++W WG GD G+LG G D P L L D VRC G
Sbjct: 540 SCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---G 596
Query: 102 GVHSIALT 109
SIALT
Sbjct: 597 SQFSIALT 604
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 2994 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3053
Query: 108 LTS 110
LTS
Sbjct: 3054 LTS 3056
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 595 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 654
Query: 108 LT 109
LT
Sbjct: 655 LT 656
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 408 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 463
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 464 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 499
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3152 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3211
Query: 108 LT 109
+T
Sbjct: 3212 VT 3213
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3045 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3104
Query: 105 SIALT 109
++ALT
Sbjct: 3105 TLALT 3109
>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 954
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 48 SSCGLFHSGLVVN--------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCI 98
++CG++HS VV+ GKL+ WG GD GRLG G + +P+ LD + +
Sbjct: 463 AACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQV 522
Query: 99 ALGGVHSIALT 109
A G ++AL+
Sbjct: 523 ACGQSITVALS 533
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGK--LWIWGKGDGGRLGFGHEDAAFVPTL 87
+ K F +CG FH V+N K ++ WGKG G+LG G + +PTL
Sbjct: 561 LGKSFVQEVACG-FHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTL 609
>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
Length = 951
Score = 43.5 bits (101), Expect = 0.030, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 9/71 (12%)
Query: 48 SSCGLFHSGLVVN--------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCI 98
++CG++HS VV+ GKL+ WG GD GRLG G + +P+ LD + +
Sbjct: 460 AACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQQV 519
Query: 99 ALGGVHSIALT 109
A G ++AL+
Sbjct: 520 ACGQSITVALS 530
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGK--LWIWGKGDGGRLGFGHEDAAFVPTL 87
+ K F +CG FH V+N K ++ WGKG G+LG G + +PTL
Sbjct: 558 LGKSFVQEVACG-FHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTL 606
>gi|328868228|gb|EGG16606.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1076
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 47 SSSCGLFHSGLVV--NGKLWIWGKGDGGRLGFGHEDAAFVPTLNP-YLDDHVRCIALGGV 103
S SCG HS V + +L+ WGKG G+LG G PT P + D + I G
Sbjct: 377 SISCGYSHSVAVQAHSSQLYSWGKGSDGQLGLGSRSDHSSPTAIPLFTSDPIVRICCGHY 436
Query: 104 HSIALTS 110
H++ALTS
Sbjct: 437 HTVALTS 443
>gi|413924972|gb|AFW64904.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 43.1 bits (100), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVH 104
S G HS + +GKL++WG+ GG+LG G V T ++ D V+ +ALG H
Sbjct: 122 SAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEH 181
Query: 105 SIALT 109
SIA+T
Sbjct: 182 SIAVT 186
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYL----DDHVRCIALGGVHSIALT 109
+WG GD GRLG G ++ + PT+ P+ D +A GG H++ LT
Sbjct: 32 LWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLT 80
>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
Length = 1109
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 13/52 (25%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPT 86
++CG++H+ VV GKL+ WG GD GRLG G ++A VPT
Sbjct: 474 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPT 525
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 40 VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRC 97
+S+ F +CG +H ++ + +++ WGKG GRLG G D PTL L D V+
Sbjct: 583 LSESFVEEIACGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRNTPTLVEALKDKDVKS 642
Query: 98 IALGGVHSIAL 108
IA G + A+
Sbjct: 643 IACGTNFTAAI 653
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 316 ACGGRHAALVTKQGEIFSWGEEAGGRLGHGVDSDVLHPKLIEALSNTNIELVACGEYHTC 375
Query: 107 ALT 109
A+T
Sbjct: 376 AVT 378
>gi|145479297|ref|XP_001425671.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392743|emb|CAK58273.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 43.1 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 51 GLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH---VRCIALGGVHSI 106
G HS L+ +G+L+ WG G+ G+LG ++ P L + H V+ +ALG H++
Sbjct: 57 GQNHSALITSDGELYTWGTGNSGQLGHNNDKDYNTPQLVEFFTKHNLKVKQVALGDYHTV 116
Query: 107 ALT 109
ALT
Sbjct: 117 ALT 119
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFV 84
+S+N + L K+ + S F + + N +L++WGKGD G G G+ + +
Sbjct: 152 DSKNRYTPTPVKALRTLKKIQHVQSGLRFTNAINENNELYVWGKGDYGVFGDGNNKSYNI 211
Query: 85 PTLNPYLDDHVRCI 98
P N + +D+++ I
Sbjct: 212 PKRNEFFEDYLKKI 225
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 43.1 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4143 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTV 4202
Query: 107 ALTS 110
A+++
Sbjct: 4203 AVST 4206
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 49 SCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHS 105
SCG H+ L +G+ +W +G GD G+LG G + + P + L +R + G S
Sbjct: 567 SCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS 626
Query: 106 IALTS---LAVEECNRCLILGEEEKRRLK 131
+ALTS + C CL G E L+
Sbjct: 627 LALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4308 ALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 4366
>gi|255570334|ref|XP_002526126.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534503|gb|EEF36202.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1114
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 13/77 (16%)
Query: 47 SSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+++CG++H+ VV GKL+ WG GD RLG G ++ PT P L D+
Sbjct: 443 AAACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDY 502
Query: 95 -VRCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 503 NFHKIACGHSLTVGLTT 519
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + P L L D HV+ IA G ++
Sbjct: 560 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKAPILVEALKDRHVKYIACGANYTA 619
Query: 107 ALTSLAVEECNRCLILGEEEKR 128
A+ C L+ G E+ +
Sbjct: 620 AI-------CLHKLVSGAEQSQ 634
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG+ H+ LV G+++ WG+ GGRLG G P L L V +A G H+
Sbjct: 286 ACGVRHAALVTRQGEVFTWGEESGGRLGHGVGKDVIQPRLVESLAVSTVDFVACGEFHTC 345
Query: 107 ALT 109
A+T
Sbjct: 346 AVT 348
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 43 RFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL 100
R S CG +S + + G L+ WG+G GRLG G+ D +P + L DH V +AL
Sbjct: 668 RRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVAL 727
Query: 101 GG--VHSIALT 109
G H++ LT
Sbjct: 728 GSGDAHTLCLT 738
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R IA G HS
Sbjct: 3138 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIRDIACGSSHSA 3197
Query: 107 ALTS 110
A++S
Sbjct: 3198 AISS 3201
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L +G+++ WG+G+ G+LG G+ + P L +L+ V IA G HS A+T+
Sbjct: 4300 ALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVADIACGSAHSAAITA 4355
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 3297 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLA 3356
Query: 108 LT 109
+T
Sbjct: 3357 VT 3358
>gi|358345377|ref|XP_003636756.1| Chromosome condensation regulator protein [Medicago truncatula]
gi|355502691|gb|AES83894.1| Chromosome condensation regulator protein [Medicago truncatula]
Length = 1170
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ VV +GKL+ WG GD RLG G +++ PT P + D+
Sbjct: 493 ACGVWHTAAVVEVIATQSIASLSSGKLFTWGDGDKNRLGHGDKESRLNPTCVPAIIDYDF 552
Query: 96 RCIALGGVHSIALTS 110
+ IA G ++ LT+
Sbjct: 553 KKIACGHSLTVGLTT 567
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG +H ++ + +++ WGKG GRLG G + PTL L D HV+ IA +S
Sbjct: 608 SCGAYHVAVLTSKNEVYTWGKGSNGRLGHGDLEDRKTPTLVEALKDRHVKYIACASNYSA 667
Query: 107 AL 108
A+
Sbjct: 668 AI 669
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG+ H+ LV G+++ WG+ GGRLG G P L L V +A G HS
Sbjct: 351 ACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALTSTTVDFVACGEFHSC 410
Query: 107 ALT 109
A+T
Sbjct: 411 AVT 413
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG H+ ++ G+++ WG+GD GRLG G FVP L L ++R + G H+
Sbjct: 40 ACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTA 99
Query: 107 ALT 109
A+T
Sbjct: 100 AVT 102
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H+ V V+G L+ WG G G+LG G+E P L L VR +A G H++
Sbjct: 92 TCGSYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTV 151
Query: 107 AL 108
L
Sbjct: 152 VL 153
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAF 83
NSE + + + KR + CG FH+ V G+++ WG G+ G+LG G +
Sbjct: 226 NSERNQPVARFVDALAGKRVKQVA-CGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKT 284
Query: 84 VPT-LNPYLDDHVRCIALGGVHSIALT 109
VPT + L+ V I G H++ LT
Sbjct: 285 VPTRVESLLEKLVLQITCGWSHTVTLT 311
>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
Length = 1129
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + PTL L D HV+ IA G ++
Sbjct: 560 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTA 619
Query: 107 AL 108
A+
Sbjct: 620 AI 621
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ VV +GKL+ WG GD RLG G ++ PT P L ++
Sbjct: 445 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNF 504
Query: 96 RCIALGGVHSIALTS 110
+ +A G ++ LT+
Sbjct: 505 QKVACGHSLTVGLTT 519
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG+ H+ LV G+++ WG+ GGRLG G P L L V +A G H+
Sbjct: 286 ACGVRHAALVTRQGEIFTWGEESGGRLGHGVGRDVIQPRLVESLAFTSVDFVACGEFHTC 345
Query: 107 ALT 109
A+T
Sbjct: 346 AVT 348
>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
Length = 910
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ HS LV NG+++ WG+ GGRLG G + + P L L +V +A G H+ A
Sbjct: 84 CGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H L + +++ WGKG GRLG G + +PTL L D VR IA G +
Sbjct: 356 ACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTA 415
Query: 107 AL 108
A+
Sbjct: 416 AI 417
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 47 SSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
S +CG++H+ +V GKL+ WG GD RLG G ++ PT L D+
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299
Query: 95 -VRCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 300 DFHRIACGHSLTVGLTT 316
>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1009
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CGL+HS +V + KL+ WG GD LG G +DA VPT + +D +
Sbjct: 408 ACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFH 467
Query: 97 CIALGGVHSIALTS 110
+A G +IAL++
Sbjct: 468 QVACGHSMTIALST 481
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
SCG H ++ + +++ WG G GRLG G + PTL L D HV+ IA G
Sbjct: 522 SCGSCHVAVLTSRSEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACG 576
>gi|413924969|gb|AFW64901.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 263
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVH 104
S G HS + +GKL++WG+ GG+LG G V T ++ D V+ +ALG H
Sbjct: 122 SAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEH 181
Query: 105 SIALT 109
SIA+T
Sbjct: 182 SIAVT 186
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYL----DDHVRCIALGGVHSIALT 109
+WG GD GRLG G ++ + PT+ P+ D +A GG H++ LT
Sbjct: 32 LWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLT 80
>gi|2244793|emb|CAB10216.1| disease resistance N like protein [Arabidopsis thaliana]
gi|7268142|emb|CAB78479.1| disease resistance N like protein [Arabidopsis thaliana]
Length = 1996
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALG 101
F SCG H ++ + +++ WGKG GRLG G +D PTL L + HV+ I+ G
Sbjct: 1476 FVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCG 1535
Query: 102 GVHSI 106
S+
Sbjct: 1536 ADQSV 1540
Score = 41.6 bits (96), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ +V + KL+ WG GD RLG G+++ +PT ++ +D +
Sbjct: 1367 ACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFN 1426
Query: 97 CIALGGVHSIALTS 110
IA G ++ALT+
Sbjct: 1427 QIACGHTFTVALTT 1440
>gi|413924970|gb|AFW64902.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 261
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVH 104
S G HS + +GKL++WG+ GG+LG G V T ++ D V+ +ALG H
Sbjct: 122 SAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEH 181
Query: 105 SIALT 109
SIA+T
Sbjct: 182 SIAVT 186
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYL----DDHVRCIALGGVHSIALT 109
+WG GD GRLG G ++ + PT+ P+ D +A GG H++ LT
Sbjct: 32 LWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLT 80
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 8/93 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V RLF S +P L+ + + + S G HS L ++G ++ WG+ D G+LG G
Sbjct: 411 VGRLFTSIPTPQLVEHLSGVPLVQ-----ISAGKAHSMALSMSGNIYSWGRNDLGQLGLG 465
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
H + P+L LD+ V +A GG H+ LT
Sbjct: 466 HTNGEDFPSLIEALDNQKVEFLACGGSHTALLT 498
>gi|390341372|ref|XP_794518.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V + G+L+ WG+GD GRLG G ++ VPTL + + V + G H+IA
Sbjct: 519 SAGYRHSACVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVSN-VGKVVCGSSHTIA 577
Query: 108 LT 109
++
Sbjct: 578 VS 579
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 28 NSPNWNQLANL----SVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAF 83
+S N QL L S+ R S+S L G+++ WG GD G+LG G+
Sbjct: 442 DSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGDYGKLGHGNTLTQK 501
Query: 84 VPT--LNPYLDDHVRCIALGGVHSIALT 109
P L + V CI+ G HS +T
Sbjct: 502 YPKVILGVLMGKVVVCISAGYRHSACVT 529
>gi|358419997|ref|XP_003584389.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Bos
taurus]
Length = 538
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 16/101 (15%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGF-- 76
NSE + N+ V + + SCG +HS V G+L+ +G+ + G+LG
Sbjct: 212 NSEGQIGLQNITNICVPHQVTIGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPP 271
Query: 77 ----GHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
H+ VP L P + + V +A GG H++ LT AV
Sbjct: 272 KLLVNHK----VPQLVPGISEKVIQVACGGGHTVVLTEKAV 308
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD GRLG G +++ VPT L +
Sbjct: 476 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEP 535
Query: 95 VRCIALGGVHSIALT 109
+A G ++AL+
Sbjct: 536 NCQVACGHSMTVALS 550
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 40 VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRC 97
+SK F +CG +H ++ + +++ WGKG GRLG G + PTL L D V+
Sbjct: 583 LSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKS 642
Query: 98 IALGGVHSIAL 108
IA G + A+
Sbjct: 643 IACGTNFTAAI 653
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G H+
Sbjct: 318 ACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTC 377
Query: 107 ALT 109
A+T
Sbjct: 378 AVT 380
>gi|328865764|gb|EGG14150.1| ankyrin repeat-containing protein [Dictyostelium fasciculatum]
Length = 1011
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--IALGGVHS 105
+CG HS L G ++ WG G GGRLG D +PT+ + D V+ IA G HS
Sbjct: 279 ACGKDHSLALDEIGCVYAWGNGAGGRLGLNKTDVVSLPTMVAHFPDQVKVVGIACGQDHS 338
Query: 106 IAL 108
+A+
Sbjct: 339 MAV 341
>gi|390341358|ref|XP_003725437.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Strongylocentrotus purpuratus]
Length = 658
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V + G+L+ WG+GD GRLG G ++ VPTL + + V + G H+IA
Sbjct: 519 SAGYRHSACVTDDGQLYTWGEGDYGRLGHGDSNSRNVPTLVKDVSN-VGKVVCGSSHTIA 577
Query: 108 LT 109
++
Sbjct: 578 VS 579
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 6/88 (6%)
Query: 28 NSPNWNQLANL----SVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAF 83
+S N QL L S+ R S+S L G+++ WG GD G+LG G+
Sbjct: 442 DSNNQTQLKKLNFDNSIITRISSSKGSDGHTLALTSEGQVFSWGDGDYGKLGHGNTLTQK 501
Query: 84 VPT--LNPYLDDHVRCIALGGVHSIALT 109
P L + V CI+ G HS +T
Sbjct: 502 YPKVILGVLMGKVVVCISAGYRHSACVT 529
>gi|348533602|ref|XP_003454294.1| PREDICTED: protein RCC2 homolog [Oreochromis niloticus]
Length = 494
Score = 43.1 bits (100), Expect = 0.036, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S C + GKLW WG+ D G+LG G P L L +HV +A G H+
Sbjct: 127 SGPCAAHSLFITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACGRNHT 186
Query: 106 IALT 109
+ALT
Sbjct: 187 LALT 190
>gi|296088111|emb|CBI35500.3| unnamed protein product [Vitis vinifera]
Length = 910
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + PTL L D HV+ IA G ++
Sbjct: 497 ACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKTPTLVETLKDRHVKYIACGSNYTA 556
Query: 107 AL 108
A+
Sbjct: 557 AI 558
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ VV +GKL+ WG GD RLG G ++ PT P L ++
Sbjct: 382 ACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIEYNF 441
Query: 96 RCIALGGVHSIALTS 110
+ +A G ++ LT+
Sbjct: 442 QKVACGHSLTVGLTT 456
>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1097
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ +V + KL+ WG GD RLG G +D +PT ++ +D +
Sbjct: 430 ACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFH 489
Query: 97 CIALGGVHSIALTS 110
IA G ++ALT+
Sbjct: 490 QIACGQTLTVALTT 503
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
L S+ F SCG H ++ + +L+ WGKG GRLG G + PTL L D
Sbjct: 530 LVQDSLVGEFVEEVSCGAHHVAVLTSRSELYTWGKGANGRLGHGDTEDRRTPTLVEALKD 589
Query: 94 -HVRCIALG 101
HV+ I+ G
Sbjct: 590 RHVKNISCG 598
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG+ H LV G+++ WG+ GGRLG G E P L +L +V +A G H+
Sbjct: 271 ACGVRHVALVTRQGEVFTWGEESGGRLGHGFETDFSCPRLVEFLAVTNVDFVACGEYHTC 330
Query: 107 ALTS 110
A+T+
Sbjct: 331 AVTT 334
>gi|218195863|gb|EEC78290.1| hypothetical protein OsI_18002 [Oryza sativa Indica Group]
Length = 1012
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
Query: 47 SSSCGLFHSGLVV----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
S SCG++H+ VV +GKL+ WG GD RLG G + PT P L D+
Sbjct: 379 SVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY 436
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 53 FHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
+HS L NG +W WGK D G LG G P L L D V IA GG +S+AL S
Sbjct: 145 YHSMALTENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSD-VTAIAAGGYYSLALKS 202
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G +W WG G+LG GH + P + +HV IA GG HS AL
Sbjct: 304 GNVWGWGDNSRGQLGLGHNSSRTTPEQLTGI-EHVLDIAGGGFHSAAL 350
>gi|297807193|ref|XP_002871480.1| hypothetical protein ARALYDRAFT_487995 [Arabidopsis lyrata subsp.
lyrata]
gi|297317317|gb|EFH47739.1| hypothetical protein ARALYDRAFT_487995 [Arabidopsis lyrata subsp.
lyrata]
Length = 554
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 37 NLSVSKRFSN--SSSCGLFHSGLVVNG--KLWIWGKGDGGRLGFGHEDAAFVPTL 87
+S RF + SCG H+ LV +G KLW WG+G G LG G+ +VPTL
Sbjct: 376 KISAGSRFRDPVQVSCGAAHTVLVADGGYKLWSWGRGRNGVLGTGNVSDCYVPTL 430
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ N +++ WGKG GRLG G + VPTL L D VR IA G +
Sbjct: 359 ACGSYHVAVLTNRSEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRAVRYIACGANFTA 418
Query: 107 AL 108
A+
Sbjct: 419 AI 420
Score = 42.7 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG+ H+ LV+ NG+++ WG+ GGRLG G + P L L +V +A G H+ A
Sbjct: 84 CGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 49 SCGLFHSGLVVN--------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG++H+ +V GKL+ WG GD RLG G ++ PT L DH
Sbjct: 242 ACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDH 301
Query: 95 -VRCIALGGVHSIALTS 110
+A G ++ALT+
Sbjct: 302 DFYRVACGHSLTVALTT 318
>gi|375267564|emb|CCD28232.1| regulator of chromosome condensation, partial [Plasmopara viticola]
Length = 287
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 12/73 (16%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH------EDAAFVPTLNPYLDD-----HVR 96
SCG H+ + N G+++IWG+GD G+LG G ED + + T P L D V
Sbjct: 164 SCGGTHTAALTNHGRVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGERVV 223
Query: 97 CIALGGVHSIALT 109
+A G HS A+T
Sbjct: 224 QVACGAFHSAAVT 236
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
Query: 47 SSSCGLFHSGLVV----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
S SCG++H+ VV +GKL+ WG GD RLG G + PT P L D+
Sbjct: 424 SVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY 481
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H L +G+++ WGKG GRLG G PT L D V+ IA G +
Sbjct: 539 ACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKTPTFVEALRDRSVKRIACGSGFTA 598
Query: 107 AL------TSLAVEECNRC 119
A+ + + +C+ C
Sbjct: 599 AICQHKSVSGMEQSQCSSC 617
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG+ H+ LV +++ WG+ GRLG G + F P L L +V IA G H+
Sbjct: 267 ACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTC 326
Query: 107 ALTS 110
A+T+
Sbjct: 327 AITA 330
>gi|413951295|gb|AFW83944.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1131
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 42 KRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIA 99
K F SCG +H L +++ WGKG GRLG G D PTL L D VR +
Sbjct: 623 KNFVEEISCGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKNTPTLVEALKDKQVRIVV 682
Query: 100 LG 101
G
Sbjct: 683 CG 684
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GK++ WG GD GRLG G + VPT L +
Sbjct: 513 AACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKGPKLVPTCVAALVEP 572
Query: 95 VRC-IALGGVHSIALTS 110
C +A G ++ALT+
Sbjct: 573 NFCQVACGHCLTVALTT 589
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG H+ LV G+++ WG+ GGRLG G + P L L ++ +A G H+
Sbjct: 355 SCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDALSHMNIELVACGEYHTC 414
Query: 107 ALT 109
A+T
Sbjct: 415 AVT 417
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 42.7 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 63 LWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSIALTS 110
L++WG GD GRLG + F+P + L +V IA GG H+IAL S
Sbjct: 164 LYLWGGGDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNS 212
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSI 106
SCG HS + +G L++WG G G+LG G + F PT +N + D + ++ G H+
Sbjct: 357 SCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQPLEDVSCGYGHTA 416
Query: 107 ALTSLAVEEC 116
A+T+ V C
Sbjct: 417 AITANGVAYC 426
>gi|332261829|ref|XP_003279969.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Nomascus leucogenys]
Length = 704
Score = 42.7 bits (99), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE + N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGKNSEGQIGLKNVPNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG + P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPSQLLGNHRTPQLVSEIPEKVIQVARGGEHTVVLTENAV 263
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 42.7 bits (99), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 22 RLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHE 79
R+F S +P LA + + + S G HS L + G ++ WGK D G+LG GH
Sbjct: 930 RIFPSSPTPQIVEHLAGVPLVQ-----ISAGEAHSMALSMTGNVYSWGKNDFGQLGLGHT 984
Query: 80 DAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
++ P+L LD V +A GG H+ LT
Sbjct: 985 ESKDSPSLLRALDSQKVDFLACGGSHTALLT 1015
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--------IA 99
SCG +HS L +G+++ WGK G+LG G E VP+ VR +A
Sbjct: 156 SCGYYHSLALSEDGQVFSWGKNSHGQLGLGKE----VPSQTS--PQRVRSLEGIPLAQVA 209
Query: 100 LGGVHSIALT 109
GG HS AL+
Sbjct: 210 AGGAHSFALS 219
>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED--AAFVPTLNPYLD-DHVRCIALGGVH 104
+ G +HS L NG+++ WG+G+ GRLGFG D + VP L + + I+ GG H
Sbjct: 255 AAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTH 314
Query: 105 SIALTS 110
S+A+TS
Sbjct: 315 SVAVTS 320
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGV 103
+CG FHS V G ++IWGK D G LG G P + DD V C GG
Sbjct: 233 ACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSC---GGW 289
Query: 104 HSIALTSLAVEECNRCLILGEEEKRRL 130
H ++ V + C G E RL
Sbjct: 290 H-----TMVVAKSGDCYAFGRGEYGRL 311
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHE-DAAF------VPTLNPYLDDHVRCIAL 100
SCG HS V N G L++WG+ G+LG E +AA P L D+ V ++
Sbjct: 113 SCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSC 172
Query: 101 GGVHSIALTSLA 112
GG H+ ALT+L
Sbjct: 173 GGTHTAALTNLG 184
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 12/73 (16%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH------EDAAFVPTLNPYL-----DDHVR 96
SCG H+ + N G++++WG+GD G+LG G +D + P+L + V
Sbjct: 171 SCGGTHTAALTNLGRVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVV 230
Query: 97 CIALGGVHSIALT 109
+A G HS A+T
Sbjct: 231 QVACGAFHSAAVT 243
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 10/69 (14%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD------DHVRCIALG 101
SCG H+ L +G ++ WG G G+LG G + VP + + D+V C G
Sbjct: 59 SCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGLKVDYVSC---G 115
Query: 102 GVHSIALTS 110
G HS A+T+
Sbjct: 116 GCHSAAVTN 124
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 48 SSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSI 106
++CG H+ V +G ++ G+ D GRLG VPT VR ++ GG HS+
Sbjct: 336 AACGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLDLGPIPVRQVSAGGAHSM 395
Query: 107 ALT 109
ALT
Sbjct: 396 ALT 398
>gi|297722879|ref|NP_001173803.1| Os04g0226400 [Oryza sativa Japonica Group]
gi|255675238|dbj|BAH92531.1| Os04g0226400, partial [Oryza sativa Japonica Group]
Length = 217
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 73 RLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
RLG G E +AFVP NP L + +R +ALGG HS ALT+
Sbjct: 24 RLGLGDESSAFVPRHNPNLSE-LRVLALGGTHSAALTA 60
>gi|297598384|ref|NP_001045490.2| Os01g0964800 [Oryza sativa Japonica Group]
gi|255674106|dbj|BAF07404.2| Os01g0964800, partial [Oryza sativa Japonica Group]
Length = 496
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ HS LV NG+++ WG+ GGRLG G + + P L L +V +A G H+ A
Sbjct: 84 CGVKHSALVTKNGEVFTWGEESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H L + +++ WGKG GRLG G + +PTL L D VR IA G +
Sbjct: 356 ACGSYHVAVLTIKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRSVRHIACGANFTA 415
Query: 107 AL 108
A+
Sbjct: 416 AI 417
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 47 SSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
S +CG++H+ +V GKL+ WG GD RLG G ++ PT L D+
Sbjct: 240 SVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDY 299
Query: 95 -VRCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 300 DFHRIACGHSLTVGLTT 316
>gi|145486941|ref|XP_001429476.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396569|emb|CAK62078.1| unnamed protein product [Paramecium tetraurelia]
Length = 747
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
SCG H+ + NG ++ WG+G G+LG G+ + P L + + IA G HS+A+
Sbjct: 439 SCGFHHTLAICNGFIYAWGRGQKGQLGLGNYETILTPKKIENLRNATQ-IACGWQHSLAI 497
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIAL 108
KL IWG G GRLGFG E +P ++ Y V C G H++A+
Sbjct: 404 KLLIWGSGQDGRLGFGDEKTCKIPQEISNYKFSQVSC---GFHHTLAI 448
>gi|118402069|ref|XP_001033354.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila]
gi|89287702|gb|EAR85691.1| Viral A-type inclusion protein repeat containing protein
[Tetrahymena thermophila SB210]
Length = 1294
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYL 91
N++ S FS+ S F + + +NG +W WG G LG G + +P TL
Sbjct: 299 NKINRHSSGTTFSDISVGNFFAAAVDINGAVWTWGANSNGELGQGDYEPKTLPQTLQALK 358
Query: 92 DDHVRCIALGGVHSIAL 108
HV+ I GG ++AL
Sbjct: 359 GRHVQKICCGGGFAMAL 375
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S SCG H+ ++ NG+++ WG G G+LG G +++ F PT ++ + G H+
Sbjct: 116 SLSCGQSHTIAVMQNGEVYGWGDGSYGQLGNGSQESRFAPTRIVSENNEFIQVQCGSRHT 175
Query: 106 IAL 108
I L
Sbjct: 176 ILL 178
>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
Length = 1082
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
Query: 47 SSSCGLFHSGLVV----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
S SCG++H+ VV +GKL+ WG GD RLG G + PT P L D+
Sbjct: 449 SVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPSLIDY 506
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG+ H+ LV +++ WG+ GRLG G + F P L L +V IA G H+
Sbjct: 292 ACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVETIACGEFHTC 351
Query: 107 ALTS 110
A+T+
Sbjct: 352 AITA 355
>gi|225451821|ref|XP_002281545.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|298204453|emb|CBI16933.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
SCG +H+ + NG+++ WG G+ G+LG + D VP LD + IA GGV
Sbjct: 232 SCGEYHTAAISENGEVYTWGLGNMGQLGHCSLQYGDKELVPRRVVALDGISTKDIACGGV 291
Query: 104 HSIALTS 110
H+ ALTS
Sbjct: 292 HTCALTS 298
>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Cucumis sativus]
Length = 390
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED--AAFVPTLNPYLD-DHVRCIALGGVH 104
+ G +HS L NG+++ WG+G+ GRLGFG D + VP L + + I+ GG H
Sbjct: 255 AAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEIVQISCGGTH 314
Query: 105 SIALTS 110
S+A+TS
Sbjct: 315 SVAVTS 320
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 52 LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
LF L +G LW WG G+LG G D P+ P L D V IA G H++A T
Sbjct: 127 LFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSD-VAAIAGGDYHALAAT 183
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
L +G +W WG G+LGFG + P L D V IA G HS+ALTS V
Sbjct: 281 ALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSLAD-VTAIASGWFHSLALTSDGV 337
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 10/88 (11%)
Query: 24 FNSENSPN-WNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDA 81
+++EN P N ++N++ + +CG HS L +G W WG G+LG G +
Sbjct: 584 YSTENRPQKINAISNVA-------AIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVS 636
Query: 82 AFVPTLNPYLDDHVRCIALGGVHSIALT 109
P L + V +A G HS+ALT
Sbjct: 637 KTTPRKVNALSN-VVAMAAGDRHSLALT 663
>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
[Brachypodium distachyon]
Length = 1005
Score = 42.7 bits (99), Expect = 0.046, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 36 ANLSVSKRFSNSS-------SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
AN+S+ + +++ SCG H+ +V G+++ WGK DGGRLG P +
Sbjct: 254 ANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKI 313
Query: 88 NPYLD-DHVRCIALGGVHSIAL 108
L HV+ IA G H+ AL
Sbjct: 314 IESLAFTHVKAIAFGAKHTCAL 335
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 44 FSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F S G H L +NGK++ WGKG G+LG G+ PTL L+D V IA G
Sbjct: 542 FVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACG 601
Query: 102 GVHSIALT---SLAVEE---CNRC 119
++A+ S++ ++ C+RC
Sbjct: 602 SNFTVAVCLHRSISGKDQSVCSRC 625
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 11/56 (19%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
+CG +H+ +V +GKL+ WG D G+LG +++ VPT L D
Sbjct: 433 ACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD 488
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH----EDAAFVPTLN-PYLDDHVRCIALG 101
+ S G + L NG+++ WG GDGGRLG G E+ + L+ HV IA G
Sbjct: 501 AHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 560
Query: 102 GVHSIALTS 110
+S A+T+
Sbjct: 561 STYSAAITA 569
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3116
Query: 107 ALTS 110
A+TS
Sbjct: 3117 AITS 3120
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3216 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3275
Query: 108 LT 109
+T
Sbjct: 3276 VT 3277
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVVFAA 366
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 600 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC---GSQFSIALT 650
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 641 CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLA 700
Query: 108 LT 109
LT
Sbjct: 701 LT 702
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L NG+++ WG GDGGRLG G VP P L HV
Sbjct: 477 AHSDGHHYLALSANGEVFSWGCGDGGRLGHGDT----VPLEEPKLISALSGKQAGKHVVH 532
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 533 IACGSTYSAAITA 545
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 3033 HSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3092
Query: 107 ALTS 110
A+TS
Sbjct: 3093 AITS 3096
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3192 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3251
Query: 108 LT 109
+T
Sbjct: 3252 VT 3253
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S L G+++ WG GD G+LG G +P L P + V+C++
Sbjct: 482 KKISSSKGSDGHSLALTTTGEVYSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVS 541
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 542 AGYRHSAAVT 551
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG G+ GRLG + + PT ++ V +A GG H++A
Sbjct: 541 SAGYRHSAAVTEDGELYTWGDGEFGRLGHDYTSSKNFPTKVQSIES-VGLVACGGSHTLA 599
Query: 108 LT 109
++
Sbjct: 600 VS 601
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH----EDAAFVPTLN-PYLDDHVRCIALG 101
+ S G + L NG+++ WG GDGGRLG G E+ + L+ HV IA G
Sbjct: 501 AHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 560
Query: 102 GVHSIALTS 110
+S A+T+
Sbjct: 561 STYSAAITA 569
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3116
Query: 107 ALTS 110
A+TS
Sbjct: 3117 AITS 3120
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3216 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3275
Query: 108 LT 109
+T
Sbjct: 3276 VT 3277
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L NG+++ WG GDGGRLG G VP P L HV
Sbjct: 501 AHSDGHHYLALSANGEVFSWGCGDGGRLGHGDT----VPLEEPKLISALSGKQAGKHVVH 556
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 557 IACGSTYSAAITA 569
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 3057 HSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3116
Query: 107 ALTS 110
A+TS
Sbjct: 3117 AITS 3120
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3216 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3275
Query: 108 LT 109
+T
Sbjct: 3276 VT 3277
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 47 SSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S+S G HS V N G+L+ WG+GD GRLG + PTL + V +A G H+
Sbjct: 481 SASAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSQSRNTPTLVKDISG-VGQVACGSSHT 539
Query: 106 IAL 108
IA+
Sbjct: 540 IAV 542
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 49 SCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHS 105
+CG H+ + +G+ +W +G GD G+LG G + + P + L +R + G S
Sbjct: 533 ACGSSHTIAVAQDGRTMWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSS 592
Query: 106 IALTSLA---VEECNRCLILGEEEKRRLK 131
+ALTS C CL G E L+
Sbjct: 593 LALTSAGQVFAWGCGSCLGCGSSETTSLR 621
>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 396
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHED--AAFVP-TLNPYLDDHVRCIALGGVH 104
+ G +HS + N G+++ WG+G+ GRLGFG D + +P +N + + ++ GG H
Sbjct: 254 AAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTH 313
Query: 105 SIALT 109
S+ALT
Sbjct: 314 SVALT 318
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSI 106
+ G FH+ L +G LW WG + G+LG G P LDD IA GG HS
Sbjct: 202 AVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHST 261
Query: 107 ALTS 110
ALT+
Sbjct: 262 ALTN 265
>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
[Brachypodium distachyon]
Length = 940
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 36 ANLSVSKRFSNSS-------SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
AN+S+ + +++ SCG H+ +V G+++ WGK DGGRLG P +
Sbjct: 189 ANVSLPRLLNSTQILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKI 248
Query: 88 NPYLD-DHVRCIALGGVHSIAL 108
L HV+ IA G H+ AL
Sbjct: 249 IESLAFTHVKAIAFGAKHTCAL 270
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 44 FSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F S G H L +NGK++ WGKG G+LG G+ PTL L+D V IA G
Sbjct: 477 FVREISSGSSHVAVLTMNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDKQVDSIACG 536
Query: 102 GVHSIALT---SLAVEE---CNRC 119
++A+ S++ ++ C+RC
Sbjct: 537 SNFTVAVCLHRSISGKDQSVCSRC 560
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 11/56 (19%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
+CG +H+ +V +GKL+ WG D G+LG +++ VPT L D
Sbjct: 368 ACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALTD 423
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 884 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 934
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3315 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3374
Query: 108 LTS 110
LTS
Sbjct: 3375 LTS 3377
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 925 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 984
Query: 108 LT 109
LT
Sbjct: 985 LT 986
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 9/94 (9%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH--- 78
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 738 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDTVP 795
Query: 79 -EDAAFVPTLN-PYLDDHVRCIALGGVHSIALTS 110
E+ + T + HV IA G +S A+T+
Sbjct: 796 LEEPKVISTFSGKQAGKHVVHIACGSTYSAAITA 829
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3473 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3532
Query: 108 LT 109
+T
Sbjct: 3533 VT 3534
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3366 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3425
Query: 105 SIALT 109
++ALT
Sbjct: 3426 TLALT 3430
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 533
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 534 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3165
Query: 105 SIALT 109
++ALT
Sbjct: 3166 TLALT 3170
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC---GSQFSIALT 674
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAP 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLV 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 556
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 557 IACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3062 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3121
Query: 108 LTS 110
LTS
Sbjct: 3122 LTS 3124
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 533
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 534 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG + + + G+L+ WG+G+ GRLG G + +P L
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVL 597
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3220 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3279
Query: 108 LT 109
+T
Sbjct: 3280 VT 3281
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3113 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3172
Query: 105 SIALT 109
++ALT
Sbjct: 3173 TLALT 3177
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 533
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 534 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG + + + G+L+ WG+G+ GRLG G + +P L
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVL 597
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3165
Query: 105 SIALT 109
++ALT
Sbjct: 3166 TLALT 3170
>gi|407002778|gb|EKE19448.1| hypothetical protein ACD_9C00014G0001, partial [uncultured
bacterium]
Length = 691
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 36 ANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDD 93
A++++ K S ++ G+ L +GK++ WG GGRLG G + A +VP P L D
Sbjct: 222 ASITLGKEVSQVTTSGISAFALTKDGKVYAWGS--GGRLGLGVGEIAEKYVPVEIPNLTD 279
Query: 94 HVRCIALGGVHSIALTS 110
V A G H +AL S
Sbjct: 280 VVSIAAGSGGHVLALKS 296
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 59 VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
V+GK++ WG+GD G+LG + L +R IA G HS ALTS
Sbjct: 2817 VDGKVFSWGEGDDGKLGHFSRMPRLIEALK---TKRIRDIACGSSHSAALTS 2865
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH--VRCIALGGVHSI 106
CG F L +G +W WGKGD RLG G + P + L V C G +H +
Sbjct: 2962 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCL 3021
Query: 107 ALT 109
A+T
Sbjct: 3022 AVT 3024
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 2854 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 2913
Query: 105 SIALT 109
++ALT
Sbjct: 2914 TLALT 2918
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 674
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3056 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3115
Query: 108 LTS 110
+TS
Sbjct: 3116 ITS 3118
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 556
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 557 IACGSTYSAAITA 569
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG + + + G+L+ WG+G+ GRLG G + +P L
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVL 597
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3214 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3273
Query: 108 LT 109
+T
Sbjct: 3274 VT 3275
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 556
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 557 IACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3165
Query: 105 SIALT 109
++ALT
Sbjct: 3166 TLALT 3170
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 601 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 651
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3032 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3091
Query: 108 LTS 110
LTS
Sbjct: 3092 LTS 3094
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 642 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 701
Query: 108 LT 109
LT
Sbjct: 702 LT 703
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 478 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 533
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 534 IACGSTYSAAITA 546
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3190 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3249
Query: 108 LT 109
+T
Sbjct: 3250 VT 3251
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3083 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3142
Query: 105 SIALT 109
++ALT
Sbjct: 3143 TLALT 3147
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 534 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC---GSQFSIALT 584
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 2965 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAP 3024
Query: 108 LTS 110
LTS
Sbjct: 3025 LTS 3027
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +
Sbjct: 575 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLV 634
Query: 108 LT 109
LT
Sbjct: 635 LT 636
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 411 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 466
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 467 IACGSTYSAAITA 479
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3123 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3182
Query: 108 LT 109
+T
Sbjct: 3183 VT 3184
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 692 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC---GSQFSIALT 742
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3121 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3180
Query: 108 LTS 110
LTS
Sbjct: 3181 LTS 3183
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 733 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 792
Query: 108 LT 109
LT
Sbjct: 793 LT 794
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 569 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 624
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 625 IACGSTYSAAITA 637
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3279 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3338
Query: 108 LT 109
+T
Sbjct: 3339 VT 3340
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3172 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3231
Query: 105 SIALT 109
++ALT
Sbjct: 3232 TLALT 3236
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 585 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 635
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 626 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 685
Query: 108 LT 109
LT
Sbjct: 686 LT 687
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 439 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 494
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 495 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 530
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3058 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3117
Query: 108 LTS 110
LTS
Sbjct: 3118 LTS 3120
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 533
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 534 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 569
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG + + + G+L+ WG+G+ GRLG G + VP L
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPML 597
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3216 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3275
Query: 108 LT 109
+T
Sbjct: 3276 VT 3277
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3109 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3168
Query: 105 SIALT 109
++ALT
Sbjct: 3169 TLALT 3173
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 614 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 664
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 655 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 714
Query: 108 LT 109
LT
Sbjct: 715 LT 716
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 468 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 523
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 524 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 559
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 556
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 557 IACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Takifugu rubripes]
Length = 726
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAF--VPTLNPYLDDHVRCIALGGVHS 105
SCG +HS V +G L+ +G+ D G+LG E VP + + + V +A GG H+
Sbjct: 197 SCGYYHSAFVTADGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKEPVTQVACGGGHT 256
Query: 106 IALT 109
+ALT
Sbjct: 257 VALT 260
>gi|351711669|gb|EHB14588.1| Putative E3 ubiquitin-protein ligase HERC6 [Heterocephalus glaber]
Length = 895
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
L ++G ++ WG D G+LG GH P+L D+ V C+A GG H+ LT
Sbjct: 2 ALSMSGNVYSWGGNDCGQLGLGHTKNTDSPSLVEVPDNQKVECVACGGAHTALLTQ 57
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHED--AAFVP-TLNPYLDDHVRCIALGGVH 104
+ G +HS + N G+++ WG+G+ GRLGFG D + +P +N + + ++ GG H
Sbjct: 254 AAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTH 313
Query: 105 SIALT 109
S+ALT
Sbjct: 314 SVALT 318
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSI 106
+ G FH+ L +G LW WG + G+LG G P LDD IA GG HS
Sbjct: 202 AVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHST 261
Query: 107 ALTS 110
ALT+
Sbjct: 262 ALTN 265
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 108 LTS 110
LTS
Sbjct: 3114 LTS 3116
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 108 LT 109
+T
Sbjct: 3272 VT 3273
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3164
Query: 105 SIALT 109
++ALT
Sbjct: 3165 TLALT 3169
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 108 LTS 110
LTS
Sbjct: 3114 LTS 3116
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 108 LT 109
+T
Sbjct: 3272 VT 3273
Score = 35.0 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3164
Query: 105 SIALT 109
++ALT
Sbjct: 3165 TLALT 3169
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 108 LTS 110
LTS
Sbjct: 3114 LTS 3116
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 108 LT 109
+T
Sbjct: 3272 VT 3273
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3164
Query: 105 SIALT 109
++ALT
Sbjct: 3165 TLALT 3169
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 108 LTS 110
LTS
Sbjct: 3114 LTS 3116
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 108 LT 109
+T
Sbjct: 3272 VT 3273
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3164
Query: 105 SIALT 109
++ALT
Sbjct: 3165 TLALT 3169
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 108 LTS 110
LTS
Sbjct: 3114 LTS 3116
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 108 LT 109
+T
Sbjct: 3272 VT 3273
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3164
Query: 105 SIALT 109
++ALT
Sbjct: 3165 TLALT 3169
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 108 LTS 110
LTS
Sbjct: 3114 LTS 3116
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 108 LT 109
+T
Sbjct: 3272 VT 3273
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3164
Query: 105 SIALT 109
++ALT
Sbjct: 3165 TLALT 3169
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 569 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC---GSQFSIALT 619
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 2998 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3057
Query: 108 LTS 110
LTS
Sbjct: 3058 LTS 3060
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 610 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 669
Query: 108 LT 109
LT
Sbjct: 670 LT 671
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 446 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 501
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 502 IACGSTYSAAITA 514
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3156 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3215
Query: 108 LT 109
+T
Sbjct: 3216 VT 3217
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3049 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3108
Query: 105 SIALT 109
++ALT
Sbjct: 3109 TLALT 3113
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 629 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC---GSQFSIALT 679
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3060 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3119
Query: 108 LTS 110
LTS
Sbjct: 3120 LTS 3122
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 670 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 729
Query: 108 LT 109
LT
Sbjct: 730 LT 731
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 506 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 561
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 562 IACGSTYSAAITA 574
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3218 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3277
Query: 108 LT 109
+T
Sbjct: 3278 VT 3279
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3111 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3170
Query: 105 SIALT 109
++ALT
Sbjct: 3171 TLALT 3175
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 556
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 557 IACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3165
Query: 105 SIALT 109
++ALT
Sbjct: 3166 TLALT 3170
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 108 LTS 110
LTS
Sbjct: 3114 LTS 3116
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 108 LT 109
+T
Sbjct: 3272 VT 3273
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3164
Query: 105 SIALT 109
++ALT
Sbjct: 3165 TLALT 3169
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3049 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3108
Query: 108 LTS 110
LTS
Sbjct: 3109 LTS 3111
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3207 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3266
Query: 108 LT 109
+T
Sbjct: 3267 VT 3268
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3100 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3159
Query: 105 SIALT 109
++ALT
Sbjct: 3160 TLALT 3164
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 108 LTS 110
LTS
Sbjct: 3114 LTS 3116
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 108 LT 109
+T
Sbjct: 3272 VT 3273
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3164
Query: 105 SIALT 109
++ALT
Sbjct: 3165 TLALT 3169
>gi|225451993|ref|XP_002283479.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296087299|emb|CBI33673.3| unnamed protein product [Vitis vinifera]
Length = 395
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAA-FVP-TLNPYLDDHVRCIALGGVHS 105
+ G +HS L +G ++ WG+G+ GRLGFG + ++ VP + +++++ I+ GG HS
Sbjct: 256 AAGGWHSTALTDDGGVYGWGRGEHGRLGFGDDKSSKMVPQKVQLLVEENIVQISCGGTHS 315
Query: 106 IALT 109
+ALT
Sbjct: 316 VALT 319
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSI 106
+ G FH+ L+ +G LW WG + G+LG G P L D IA GG HS
Sbjct: 204 AVGAFHNLALLEDGILWAWGNNEYGQLGTGDTQPRSQPIAVQGLSDLTLVDIAAGGWHST 263
Query: 107 ALT 109
ALT
Sbjct: 264 ALT 266
>gi|443704114|gb|ELU01326.1| hypothetical protein CAPTEDRAFT_215877 [Capitella teleta]
Length = 627
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 51 GLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
G HS V +G+L+ WG+GD GRLG G VPTL + + V +A G H+IA++
Sbjct: 505 GYRHSAAVTEDGQLYTWGEGDFGRLGHGDNSGRNVPTLVKDISN-VGQVACGSSHTIAVS 563
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S L V G L+ WG GD G+LG G+ P L P V+CI
Sbjct: 444 KKISSSKGSDGHTLALTVEGALFSWGDGDYGKLGHGNISTQKYPKLIQGPLAGKVVKCIC 503
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 504 AGYRHSAAVT 513
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 42.7 bits (99), Expect = 0.052, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G ++ WGKGD RLG G +D P L V CIA+G +H +A
Sbjct: 833 CGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVA 892
Query: 108 LT 109
T
Sbjct: 893 CT 894
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
+CG HS + +G+L+ WGKG GRLG G D P L VRC+A G
Sbjct: 726 ACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRCVACG 780
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALTS 110
L G+++ WG+GD G+LG G++ + P + L V +A GG HS +T+
Sbjct: 682 ALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITA 737
>gi|157112353|ref|XP_001651804.1| hypothetical protein AaeL_AAEL006116 [Aedes aegypti]
gi|108878111|gb|EAT42336.1| AAEL006116-PA [Aedes aegypti]
Length = 1973
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALT 109
G +H+ +V NG L+ WG G G+LG G PT+ + +++ IALG H++ L
Sbjct: 1214 GQYHNAVVANGLLYTWGWGIFGQLGHGSIADCSKPTIVEFFRKKNIQQIALGHAHTLVLC 1273
Query: 110 SLAVEECN 117
+ECN
Sbjct: 1274 R---QECN 1278
>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
Length = 916
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG+ H+ LV+ NG+++ WG+ GGRLG G + P L L +V +A G H+ A
Sbjct: 84 CGVKHAALVMKNGEVFTWGEDSGGRLGHGTREDCVRPRLVESLTVSNVDFVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 9/90 (10%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ +++ WGKG GRLG G + VPTL L D VR IA G +
Sbjct: 359 ACGSYHVAVLTGRNEVFTWGKGANGRLGHGDIEDRKVPTLVEVLKDRAVRYIACGANFTA 418
Query: 107 AL------TSLAVEECNRC-LILGEEEKRR 129
A+ + +C+ C G KRR
Sbjct: 419 AICQYKWVSGADQSQCSSCRQPFGFTRKRR 448
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 15/77 (19%)
Query: 49 SCGLFHSGLVVN--------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG++H+ +V GKL+ WG GD RLG G ++ PT L DH
Sbjct: 242 ACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLIDH 301
Query: 95 -VRCIALGGVHSIALTS 110
+A G ++ALT+
Sbjct: 302 DFYRVACGHSLTVALTT 318
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 569 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 619
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3059 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3118
Query: 108 LTS 110
LTS
Sbjct: 3119 LTS 3121
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 610 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 669
Query: 108 LT 109
LT
Sbjct: 670 LT 671
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 423 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 478
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 479 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 514
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3217 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3276
Query: 108 LT 109
+T
Sbjct: 3277 VT 3278
Score = 35.0 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3110 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3169
Query: 105 SIALT 109
++ALT
Sbjct: 3170 TLALT 3174
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 533
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
+P P + HV IA G +S A+T+
Sbjct: 534 --LPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITA 569
Score = 35.0 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3165
Query: 105 SIALT 109
++ALT
Sbjct: 3166 TLALT 3170
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 108 LTS 110
LTS
Sbjct: 3114 LTS 3116
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 108 LT 109
+T
Sbjct: 3272 VT 3273
Score = 35.0 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3164
Query: 105 SIALT 109
++ALT
Sbjct: 3165 TLALT 3169
>gi|291401444|ref|XP_002717009.1| PREDICTED: hect domain and RLD 3-like [Oryctolagus cuniculus]
Length = 974
Score = 42.4 bits (98), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
S G HS L ++G ++ WGK D G+LG GH + P L LD+ V +A GG H+
Sbjct: 187 SAGEAHSMTLSMSGNVYSWGKNDLGQLGLGHTENKDSPCLIEALDNQKVEFVACGGSHTA 246
Query: 107 ALTS 110
LT
Sbjct: 247 LLTQ 250
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 533
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 534 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3165
Query: 105 SIALT 109
++ALT
Sbjct: 3166 TLALT 3170
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3047 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3106
Query: 108 LTS 110
LTS
Sbjct: 3107 LTS 3109
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3205 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3264
Query: 108 LT 109
+T
Sbjct: 3265 VT 3266
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3098 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3157
Query: 105 SIALT 109
++ALT
Sbjct: 3158 TLALT 3162
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 312 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 362
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 2692 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2751
Query: 108 LTS 110
LTS
Sbjct: 2752 LTS 2754
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 353 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 412
Query: 108 LT 109
LT
Sbjct: 413 LT 414
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 9/94 (9%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFG---- 77
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 166 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDTVP 223
Query: 78 -HEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
E A HV IA G +S A+T+
Sbjct: 224 LEEPKAISAFSGKQAGKHVVHIACGSTYSAAITA 257
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2850 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2909
Query: 108 LT 109
+T
Sbjct: 2910 VT 2911
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 2743 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 2802
Query: 105 SIALT 109
++ALT
Sbjct: 2803 TLALT 2807
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 42.4 bits (98), Expect = 0.054, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 556
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 557 IACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3165
Query: 105 SIALT 109
++ALT
Sbjct: 3166 TLALT 3170
>gi|302855135|ref|XP_002959067.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
gi|300255564|gb|EFJ39861.1| hypothetical protein VOLCADRAFT_108456 [Volvox carteri f.
nagariensis]
Length = 942
Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH---VRCIALGGVH 104
SCG FH+ L G++ WG D G+LG G A P P LD V IA GG H
Sbjct: 454 SCGAFHNLALTAQGRVLSWGMNDYGQLGNGSTTYATTP--RPVLDMEGVVVADIAAGGWH 511
Query: 105 SIALTS 110
S AL+S
Sbjct: 512 SCALSS 517
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
G++W +G D G LG GH D P P L + +A+GG H +AL+
Sbjct: 310 GQVWSFGWNDRGTLGHGHRDVETKPKRIPALKGIRIVQVAIGGWHCLALS 359
>gi|255549098|ref|XP_002515604.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis]
gi|223545242|gb|EEF46749.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis]
Length = 374
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFV--PTLNPYLDD-HVRCIALGGVH 104
S G HS + V+G+L++WG+ G+LG G + V PT YL+ ++ +ALG H
Sbjct: 114 SAGYHHSCAITVDGELYMWGRNSNGQLGLGKKAQRIVPLPTKVEYLNGLTIKLVALGSEH 173
Query: 105 SIALT 109
SIA+T
Sbjct: 174 SIAVT 178
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTL---NPYLDDHVRCIALGGVHSIALT 109
+WG GD GRLG G D+ + P L + + + ++ IA GG H++ LT
Sbjct: 25 VWGNGDFGRLGTGSLDSQWRPKLLLSSCFANHSLKSIACGGAHTLFLT 72
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVH 104
S G HS + +GKL++WG+ GG+LG G V T ++ D V+ +ALG H
Sbjct: 122 SAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVKTVALGSEH 181
Query: 105 SIALT 109
SIA+T
Sbjct: 182 SIAVT 186
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYL----DDHVRCIALGGVHSIALT 109
+WG GD GRLG G ++ + PT+ P+ D +A GG H++ LT
Sbjct: 32 LWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLT 80
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 600 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 650
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 2806 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2865
Query: 108 LTS 110
LTS
Sbjct: 2866 LTS 2868
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 641 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 700
Query: 108 LT 109
LT
Sbjct: 701 LT 702
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2964 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3023
Query: 108 LT 109
+T
Sbjct: 3024 VT 3025
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 2857 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 2916
Query: 105 SIALT 109
++ALT
Sbjct: 2917 TLALT 2921
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 28 NSPNWNQLANLS--VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
N P QL +LS V K+ + S G L V+GK++ WG+GD G+LG P
Sbjct: 2987 NVPQPRQLTSLSQYVIKKVAVHSG-GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3045
Query: 86 TLNPYL-DDHVRCIALGGVHSIALTS 110
L L VR IA GG HS A+ S
Sbjct: 3046 RLIEALRSKRVRDIACGGSHSAAIIS 3071
Score = 38.5 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 41 SKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIA 99
SKR + + G + ++ NG L+ WG G+ GRLG G P L L+ V +A
Sbjct: 3053 SKRVRDIACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVIQVA 3112
Query: 100 LGG--VHSIALT 109
LG ++ALT
Sbjct: 3113 LGSRDAQTLALT 3124
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPY 90
++L L V++ + CG +S V NG ++ WG G+G +LG G E+ P +
Sbjct: 631 DKLQGLDVTRVY-----CGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETL 685
Query: 91 LDDHVRCIALGGVHSIALT 109
HV ++LG H +A T
Sbjct: 686 AGKHVTSLSLGSHHCLATT 704
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG HS + +G+L+ WG+G GRLG G + P L
Sbjct: 536 ACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPAL 575
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G++W WGKGD RLG G + P L L V +A+G +H ++
Sbjct: 3167 CGAQFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLS 3226
Query: 108 L 108
+
Sbjct: 3227 V 3227
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G ++ WGKGD RLG G ED P L + IA G +H +A
Sbjct: 4188 CGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGKKIVSIACGSLHCVA 4247
Query: 108 LT 109
T
Sbjct: 4248 CT 4249
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 328 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC---GSQFSIALT 378
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 369 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLA 428
Query: 108 LT 109
LT
Sbjct: 429 LT 430
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 1243 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 1302
Query: 107 ALTS 110
A+TS
Sbjct: 1303 AITS 1306
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 21 VRLFNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH 78
V+ +NS+ P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 179 VQAYNSDTLGPQLVQGLASRNIVKVAAHSD--GHHYLALAATGEVFSWGCGDGGRLGHGD 236
Query: 79 ----EDAAFVPTLN-PYLDDHVRCIALGGVHSIALTS 110
E+ + L+ HV IA G +S A+T+
Sbjct: 237 TVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITA 273
>gi|307204787|gb|EFN83345.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Harpegnathos saltator]
Length = 1665
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 39 SVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
S+++ + G +HS L +G+++ WG G G+LG G+ D +PTL L V C
Sbjct: 688 SLAQEIIVDAVAGQYHSVALTADGRVFTWGWGVHGQLGHGNTDEKSIPTLVTSLLGVVVC 747
Query: 98 -IALGGVHSIALTSLAVEECNRCLILGE 124
I+ G H++AL+ C +LG+
Sbjct: 748 HISAGYAHTLALSVDGFVYAFGCNVLGQ 775
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 614 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 664
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 655 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 714
Query: 108 LT 109
LT
Sbjct: 715 LT 716
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 468 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 523
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 524 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 559
>gi|374579969|ref|ZP_09653063.1| putative repeat protein [Desulfosporosinus youngiae DSM 17734]
gi|374416051|gb|EHQ88486.1| putative repeat protein [Desulfosporosinus youngiae DSM 17734]
Length = 4202
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 54 HSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP---TLNPYLDDHVRCIALGGVHSIAL 108
HS + +G+++IWG+G GGRLG G + P + + V IA GG HS+AL
Sbjct: 1859 HSLALKDGRVYIWGEGSGGRLGNGSYENQATPVEVSAGAMGNTGVIAIAAGGFHSLAL 1916
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 44 FSNSS----SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY---LDDHVR 96
F+NS S G + S + +G ++ WG G GRLG G D +P + + V
Sbjct: 174 FTNSGVTAISAGEYTSFALKDGVVYAWGYGQNGRLGTGSTDNQLIPVKVAHGAMGNSDVT 233
Query: 97 CIALGGVHSIAL 108
IA GG HS+AL
Sbjct: 234 AIA-GGTHSLAL 244
>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
distachyon]
Length = 913
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG+ H+ LV NG+++ WG+ GGRLG G + P+L L +V +A G H+ A
Sbjct: 99 CGVKHAALVTKNGEVFTWGEESGGRLGHGSREDYIHPSLVESLAVSNVDFVACGEFHTCA 158
Query: 108 LTS 110
+T+
Sbjct: 159 VTT 161
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H L V +++ WGKG GRLG G + +PTL L D VR IA G +
Sbjct: 371 ACGSYHVAVLTVKSEVFTWGKGANGRLGHGDIEDRKIPTLVEVLRDRGVRHIACGANFTA 430
Query: 107 ALTSLAVEECNRCLILGEEEKR 128
A+ C R + G E+ +
Sbjct: 431 AI-------CQRKWMSGAEQSQ 445
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVN------------GKLWIWGKGDGG 72
N E+ P ++ +LS K + +CG++H+ VV GKL+ WG GD
Sbjct: 235 NRESIPCPREVESLSGLKTIA--VACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKH 292
Query: 73 RLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
RLG G ++ PT L D+ IA G ++ LT+
Sbjct: 293 RLGHGDKEPRVKPTCVASLIDYDFHRIACGHSLTVGLTT 331
>gi|400597595|gb|EJP65325.1| GDP/GTP exchange factor [Beauveria bassiana ARSEF 2860]
Length = 555
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGF----GHEDAAFV-PTLNPYLDDHVRCIALGG 102
+CG +HS L NGKLW WG + G +G G +DA + P LDDHV GG
Sbjct: 354 ACGGYHSFALDKNGKLWGWGLNNFGEIGVQSNAGEDDAVILKPAKLTDLDDHVITDMDGG 413
Query: 103 VH 104
VH
Sbjct: 414 VH 415
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 39 SVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVR 96
S++ + CG H+ L NGK++ WG + G+LG G P L LD H+
Sbjct: 680 SITSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLGDTQKNCTPMLVTSLDKYHII 739
Query: 97 CIALGGVHSIALTS 110
IA G H+ LT+
Sbjct: 740 QIACGATHNAVLTN 753
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
S G +HS V NG+L WG G+ G+LG G +P + + H V + G H+I
Sbjct: 638 SIGFYHSAAVKSNGELLTWGCGEDGQLGHGDVFNQPIPKVVQSITSHWVTQVQCGEKHTI 697
Query: 107 ALT 109
LT
Sbjct: 698 CLT 700
>gi|47212325|emb|CAF91263.1| unnamed protein product [Tetraodon nigroviridis]
Length = 416
Score = 42.4 bits (98), Expect = 0.059, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHS 105
S C + GKLW WG+ D G+LG G P L L DH V A G H+
Sbjct: 60 SGPCAAHSLLITAEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLADHLVVAAACGRNHT 119
Query: 106 IALT 109
+ALT
Sbjct: 120 LALT 123
>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1096
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ ++ + KL+ WG GD RLG G++D PT ++P ++ + +
Sbjct: 256 ACGVWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQ 315
Query: 97 CIALGGVHSIALTS 110
IA G ++ALT+
Sbjct: 316 QIACGHTMTVALTT 329
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F SCG H V + +L+ WGKG GRLG G D PTL L D H++ I+ G
Sbjct: 365 FIEEISCGAHHVAAVTSRSELYTWGKGSNGRLGHGDTDDRKSPTLVLALKDRHLKNISCG 424
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 49 SCGLFHSGLVVN--GKLWIWGKGDGGRLGFG-HEDAAFVPTLNPYLDDH-VRCIALGGVH 104
SCG HS + VN G+L+ WG GDGG+LG G E +P L L DH + + G H
Sbjct: 89 SCGRGHS-MAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQH 147
Query: 105 SIALT 109
+AL+
Sbjct: 148 CVALS 152
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S + G FH+ V +G LW+WG G G+LG G VP L H IA GG H+
Sbjct: 653 SIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGL-GHAVAIAAGGYHT 711
Query: 106 IAL 108
+AL
Sbjct: 712 VAL 714
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Query: 43 RFSNSSSCGLFHSGLVVNG-KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALG 101
+F S S G++H+ V +G LW WG G+LG G PT L+ V A G
Sbjct: 145 QFCPSVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLNQVVSASA-G 203
Query: 102 GVHSIALT 109
HS+A+T
Sbjct: 204 AEHSVAVT 211
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S+S G HS V +G +W WG G+LG G VP P + D V +A G +
Sbjct: 199 SASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSD-VVAVAAAGSRT 257
Query: 106 IALTS 110
+AL +
Sbjct: 258 VALKA 262
>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED--AAFVPT-LNPYLDDHVRCIALGGVH 104
+ G +HS L +G+++ WG+G+ GRLGFG D + VP +N + + + ++ GG H
Sbjct: 255 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTH 314
Query: 105 SIALT 109
S+ALT
Sbjct: 315 SVALT 319
>gi|449469320|ref|XP_004152369.1| PREDICTED: uncharacterized protein LOC101216037 [Cucumis sativus]
Length = 1088
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 47 SSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDD 93
S +CG +H+ +V+ GKL+ WG GD G+LG G + +PT + P +D
Sbjct: 463 SVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVDC 522
Query: 94 HVRCIALGGVHSIALTSL 111
++ G + ++ LT++
Sbjct: 523 DFAQVSCGRMLTVGLTNM 540
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRC 97
+ + F + S G +H + L G+++ WGKG G+LG G D +PT L D V
Sbjct: 571 LKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVES 630
Query: 98 IALGGVHSIAL 108
IA G + A+
Sbjct: 631 IACGSNFTAAI 641
>gi|384495236|gb|EIE85727.1| hypothetical protein RO3G_10437 [Rhizopus delemar RA 99-880]
Length = 372
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVNGKLWIWG-KGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
VSK ++++ + + L V G+L+ WG G GRLG GH++ AF+P +D V
Sbjct: 304 QVSKIYASTD----YAAALTVQGELFTWGLNGPSGRLGLGHQEHAFIPK-RVNIDRKVID 358
Query: 98 IALGGVHSIAL 108
++LG H++ L
Sbjct: 359 VSLGVNHALVL 369
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 5/65 (7%)
Query: 49 SCGLFHSGLVVN--GKLWIWGKGDGGRLGF-GHEDAAFVPTLNPYLDDH-VRCIALGGVH 104
SCG HS + VN G++++WG GDGG+LG E A +P L L DH + + G H
Sbjct: 89 SCGRAHS-VAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQH 147
Query: 105 SIALT 109
IAL+
Sbjct: 148 CIALS 152
>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
Length = 1120
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHV 95
+CG++H+ VV +GKL+ WG GD RLG G ++A PT ++ +D +
Sbjct: 443 ACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDYNF 502
Query: 96 RCIALGGVHSIALTS 110
IA G ++ LT+
Sbjct: 503 HKIACGHSLTVGLTT 517
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + P L L D HV+ IA G +S
Sbjct: 558 ACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACGSNYSA 617
Query: 107 AL 108
A+
Sbjct: 618 AI 619
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSI 106
+CG+ H+ LV G+++ WG+ GGRLG G P L + + +A G HS
Sbjct: 284 ACGVRHASLVTRQGEVFTWGEESGGRLGHGVGKNVVQPRLVEALISTTIDFVACGEFHSC 343
Query: 107 ALT 109
A+T
Sbjct: 344 AVT 346
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 44 FSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
F +CG +HS L K+ WG+G GGRLG G ED VP
Sbjct: 345 FIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVP 387
>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
Length = 396
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHED--AAFVP-TLNPYLDDHVRCIALGGVH 104
+ G +HS + N G+++ WG+G+ GRLGFG D + +P +N + + ++ GG H
Sbjct: 254 AAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQVSCGGTH 313
Query: 105 SIALT 109
S+ALT
Sbjct: 314 SVALT 318
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSI 106
+ G FH+ L +G LW WG + G+LG G P LDD IA GG HS
Sbjct: 202 AVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHST 261
Query: 107 ALTS 110
ALT+
Sbjct: 262 ALTN 265
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 42.4 bits (98), Expect = 0.064, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGNPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVVFAA 366
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD----DHVRCIALGGVH 104
CG F L G++W WGKG+ RLG G + PTL L DH IA+G +H
Sbjct: 2845 CGAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRRPTLVNQLKLVTIDH---IAVGTLH 2901
Query: 105 SIALTS 110
IA+++
Sbjct: 2902 CIAVST 2907
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFG-HEDAAFVPTLNPYLDDHVRCIALG 101
+CG FHS + G L+ WGKG GRLG G +ED + + ++ HV +A G
Sbjct: 3691 ACGGFHSAAISRYGHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACG 3745
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC---IALGGVHSIALT 109
L G+++ WG GD G+LG G+ P L L D +C IA GG HS A++
Sbjct: 3647 ALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSD--KCIIDIACGGFHSAAIS 3701
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSI 106
HSG L ++GK+ WG G+ G+LG G P L + L V IA G HS
Sbjct: 2686 HSGGKHAMALSLDGKVLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSA 2745
Query: 107 ALTS 110
A+TS
Sbjct: 2746 AITS 2749
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGG--VH 104
+CG HS + +G+L+ WG+G GRLG E + P L ++ ++ +A G
Sbjct: 2738 ACGSAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQ 2797
Query: 105 SIALTS 110
++AL S
Sbjct: 2798 TLALDS 2803
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 666 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 716
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 707 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 766
Query: 108 LT 109
LT
Sbjct: 767 LT 768
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 520 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 575
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 576 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 611
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G VPT L+ H + +A G H++
Sbjct: 1944 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTL 2003
Query: 107 ALTS 110
+++
Sbjct: 2004 CVSA 2007
>gi|340501848|gb|EGR28585.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 612
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSI 106
SCG H+ + N +++ WG G+GG LG +E+ P ++ + D V I GG+HS+
Sbjct: 232 SCGSEHTLALDNRNQVYSWGNGEGGLLGHSNEEIQASPKIIDKFQDLQVEFIICGGLHSL 291
Query: 107 ALT 109
ALT
Sbjct: 292 ALT 294
>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
Length = 413
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 61 GKLWI--WGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALT 109
GK W+ WG GD GRLG + F P L L+ H C ++ GG H++ LT
Sbjct: 26 GKRWVALWGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILT 77
>gi|402873781|ref|XP_003900735.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Papio anubis]
Length = 398
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 29 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 79
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 70 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 129
Query: 108 LT 109
LT
Sbjct: 130 LT 131
>gi|405362962|ref|ZP_11025960.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397089905|gb|EJJ20791.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 547
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHE 79
+VS F +S G HSG V NG+++ WG+ + G+LG G E
Sbjct: 172 TVSFHFGGLASAGGLHSGTVRNGRVYTWGRNNRGQLGLGAE 212
>gi|342182230|emb|CCC91709.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 612
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 51 GLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP--TLNPYLDDHVRCIALGGVHSIA 107
G +HSG + + G+L+ WG G GRLG G+ + P D HV +A G H++A
Sbjct: 381 GQWHSGAISSTGELFTWGIGFQGRLGHGNTEPVLRPKRVRGALADRHVVDVACGSFHTVA 440
Query: 108 LTSLAVEEC 116
LT C
Sbjct: 441 LTDCGSVYC 449
>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
Length = 413
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 61 GKLWI--WGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALT 109
GK W+ WG GD GRLG + F P L L+ H C ++ GG H++ LT
Sbjct: 26 GKRWVALWGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILT 77
>gi|299116914|emb|CBN75024.1| Regulator of chromosome condensation, RCC1; Ankyrin ubiquitin
interaction motif, zinc finger protein [Ectocarpus
siliculosus]
Length = 1310
Score = 42.4 bits (98), Expect = 0.068, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLD 92
LANL V++ ++ HS V V GKL+ WG G GRLG G+E+ +PT ++
Sbjct: 198 LANLHVTRVAASKH-----HSAAVTVCGKLFTWGHGKSGRLGHGNEEVCMLPTPVDGLAH 252
Query: 93 DHVRCIALGGVHSIALT 109
V +++ H+ ALT
Sbjct: 253 QAVTDVSVAETHTAALT 269
>gi|449484483|ref|XP_004156895.1| PREDICTED: uncharacterized protein LOC101227493 [Cucumis sativus]
Length = 1077
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 46 NSSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLD 92
S +CG +H+ +V+ GKL+ WG GD G+LG G + +PT + P +D
Sbjct: 482 KSVACGSWHTAAIVDIMIDRFKFKSAVGKLFTWGDGDKGKLGHGDNERKLLPTCVAPLVD 541
Query: 93 DHVRCIALGGVHSIALTSL 111
++ G + ++ LT++
Sbjct: 542 CDFAQVSCGRMLTVGLTNM 560
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRC 97
+ + F + S G +H + L G+++ WGKG G+LG G D +PT L D V
Sbjct: 591 LKEEFVKAISSGSYHVASLTSTGRVYTWGKGAHGQLGLGDSDDRNLPTFVEALGDKQVES 650
Query: 98 IALGGVHSIAL 108
IA G + A+
Sbjct: 651 IACGSNFTAAI 661
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
L ++G +W WGK D G+LG G + PT P L + V + GG HS+AL
Sbjct: 262 LKMDGSVWSWGKNDAGQLGLGSVVSTPTPTQVPGLTEMV-AVTGGGQHSVAL 312
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
L +G W WG G+LG G PT P L D VR +A+G VH++ L
Sbjct: 663 ALKADGTAWAWGPNAQGQLGGGLSVPRTRPTQVPTLTD-VRTVAMGAVHALVL 714
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 11/68 (16%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLN-----PYLDDHVRCIALGG 102
+ G FHS L V+G +W WG G+LG D PT N P L+ V +A GG
Sbjct: 504 ASGNFHSLALSVDGSVWAWGDNSLGQLG----DGTVTPTRNAPFRVPNLEG-VVSLAAGG 558
Query: 103 VHSIALTS 110
HS+AL +
Sbjct: 559 EHSLALKA 566
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis
domestica]
Length = 4706
Score = 42.4 bits (98), Expect = 0.070, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G S+ALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSVALT 674
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 3054 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113
Query: 107 ALTS 110
A+TS
Sbjct: 3114 AITS 3117
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH----EDAAFVPTLN-PYLDDHVRCIALG 101
+ S G + L G+++ WG GDGGRLG G E+ + L+ HV IA G
Sbjct: 501 AHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 560
Query: 102 GVHSIALTS 110
+S A+T+
Sbjct: 561 STYSAAITA 569
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 42.0 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 SCGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG+ F + L+ G+L+ WG G+LG G ++ +P + P ++ HV +A G H +
Sbjct: 167 ACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRHVHLMACGAAHIV 226
Query: 107 ALTS 110
LT+
Sbjct: 227 VLTT 230
>gi|47214395|emb|CAG00876.1| unnamed protein product [Tetraodon nigroviridis]
Length = 371
Score = 42.0 bits (97), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAF--VPTLNPYLDDHVRCIALGGVHS 105
SCG +HS LV G L+ +G+ D G+LG E VP + + VR +A GG H+
Sbjct: 187 SCGYYHSALVTAAGALYTFGERDSGKLGLTTEQLPRHRVPQPVRSIGEPVRQVACGGGHT 246
Query: 106 IALT 109
+ALT
Sbjct: 247 VALT 250
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 42.0 bits (97), Expect = 0.070, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 820 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 870
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 861 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 920
Query: 108 LT 109
LT
Sbjct: 921 LT 922
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 697 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 752
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 753 IACGSTYSAAITA 765
>gi|298714248|emb|CBJ27384.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 635
Score = 42.0 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 59 VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHSIALT 109
+ G L++WG+G+ G+LG G ++ +P LN + V +A+G HS+ LT
Sbjct: 211 MGGDLYVWGRGESGQLGLGDRESKQIPVLNAGFPEGTEVSQVAVGENHSLVLT 263
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSI 106
S +C L SG V W WG+ G+LG G P L V IA GGVH+
Sbjct: 485 SHTCALMSSGGV-----WCWGRNSSGQLGDGTTTDRGTPVAVSGLPSEVTAIASGGVHTC 539
Query: 107 ALTS 110
ALTS
Sbjct: 540 ALTS 543
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G H+ L +G +W WG G+LG G A P L V IA G H+ A
Sbjct: 583 AAGDLHTCALTSSGGVWCWGANSSGQLGDGTTTARSTPVAVSGLPSGVTAIAAGSFHTCA 642
Query: 108 LTS 110
LTS
Sbjct: 643 LTS 645
>gi|330800741|ref|XP_003288392.1| hypothetical protein DICPUDRAFT_33948 [Dictyostelium purpureum]
gi|325081574|gb|EGC35085.1| hypothetical protein DICPUDRAFT_33948 [Dictyostelium purpureum]
Length = 420
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGH-EDAAFVPTLNPYLDDHVRCIALGGVHSI 106
SCG S ++ + +++IWG G G+LG G +D PTL L+D V I+ G H +
Sbjct: 288 SCGSCASAAILSDNRVYIWGSGGDGKLGLGERKDDLLKPTLLDTLNDKVSQISFGSDHCV 347
Query: 107 AL 108
AL
Sbjct: 348 AL 349
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +H+ L+ +G +W WG+ + G+LG G A P L V IA GG+H+ A
Sbjct: 366 AAGDYHTCALMSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSGVTAIAAGGLHTCA 425
Query: 108 LTS 110
L S
Sbjct: 426 LMS 428
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
GL L+ +G +W WG + G+LG G + + P L V IA GG H+ ALTS
Sbjct: 420 GLHTCALMSSGGVWCWGLNNSGQLGDGSDTDSSTPVAVSGLASGVETIAAGGWHTCALTS 479
Score = 42.0 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
GL L+ +G +W WG+ D G+LG G + + P L V IA G H+ ALT
Sbjct: 267 GLHTCALMSSGGVWCWGRNDSGQLGDGSDTDSSTPVAVSGLPSGVTAIAAGDYHTCALT 325
Score = 38.5 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G FH+ L +G +W WG G+LG G P L V IA GG H+ A
Sbjct: 570 AAGRFHTCALTSSGGVWCWGANFDGQLGDGTTTNRTTPVAVSGLPSGVTAIAAGGWHTCA 629
Query: 108 LTS 110
LTS
Sbjct: 630 LTS 632
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +H+ L +G +W WG+ + G+LG G P L V IA G H+ A
Sbjct: 468 AAGGWHTCALTSSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSGVTAIAAGDYHTCA 527
Query: 108 LT 109
LT
Sbjct: 528 LT 529
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +H+ L +G++W WG G+LG G A P L V IA G H+ A
Sbjct: 315 AAGDYHTCALTGSGEVWCWGGNGFGQLGDGTTTARSTPAAVSGLPSGVETIAAGDYHTCA 374
Query: 108 LTS 110
L S
Sbjct: 375 LMS 377
>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 959
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ H+ LV NG+++ WG+ GGRLG G + + P L L +V +A G H+ A
Sbjct: 84 CGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVR 96
+CG++H+ VV GKL+ WG GD RLG G ++ PT L D+
Sbjct: 242 ACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCVASLIDYDF 301
Query: 97 C-IALGGVHSIALTS 110
C IA G ++ LT+
Sbjct: 302 CRIACGHSLTVGLTT 316
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ N +++ WGKG GRLG G + +PTL L D VR IA G +
Sbjct: 356 ACGSYHVAVLTNKSEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRAVRHIACGSNFTS 415
Query: 107 AL 108
A+
Sbjct: 416 AI 417
>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
Length = 870
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ H+ LV NG+++ WG+ GGRLG G + + P L L +V +A G H+ A
Sbjct: 84 CGVKHAALVTKNGEVFTWGEESGGRLGHGSREDSVHPRLVESLAICNVDIVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVR 96
+CG++H+ VV GKL+ WG GD RLG G ++ PT L D+
Sbjct: 242 ACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDF 301
Query: 97 C-IALGGVHSIALTS 110
C IA G ++ LT+
Sbjct: 302 CRIACGHSLTVGLTT 316
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ N +++ WGKG GRLG G + +PTL L D VR IA G +
Sbjct: 356 ACGSYHVAVLTNKSEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDRGVRHIACGSNFTS 415
Query: 107 AL 108
A+
Sbjct: 416 AI 417
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVIFAA 366
Score = 35.4 bits (80), Expect = 8.4, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG HS +V N KL+++G + G+LG G + A PT L + V+ A G H++
Sbjct: 41 SCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTL 100
Query: 107 ALT 109
T
Sbjct: 101 VST 103
>gi|322699843|gb|EFY91602.1| Ran exchange factor Prp20/Pim1, putative [Metarhizium acridum CQMa
102]
Length = 539
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 7/55 (12%)
Query: 63 LWIWGKGDGGRLGFG-HEDAAFVPTLNPYLDD------HVRCIALGGVHSIALTS 110
++ +G G+ G LG G AA VP NP LD H+ +A GG+H+IALT+
Sbjct: 109 VFAFGSGECGELGLGPKRTAALVPKFNPALDPNDASKYHIVQLACGGMHTIALTA 163
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G S+ALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSVALT 674
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 533
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 534 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3165
Query: 105 SIALT 109
++ALT
Sbjct: 3166 TLALT 3170
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G S+ALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRC---GSQFSVALT 674
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVVFAA 366
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.9 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVVFAA 366
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG HS +V N KL+++G + G+LG G + A PT L + V+ A G H++
Sbjct: 41 SCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTL 100
Query: 107 ALT 109
T
Sbjct: 101 VST 103
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.9 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVVFAA 366
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 42.0 bits (97), Expect = 0.079, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.9 bits (89), Expect = 0.59, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVVFAA 366
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 8/93 (8%)
Query: 40 VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRC 97
+KR + S+CG FH+ +V + G+L+ WG+G GRLG E PT+ Y+ R
Sbjct: 188 AAKRVAQISACG-FHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYMVGKKPRQ 246
Query: 98 IALGGVHSIALTSLAVEECNRCLILGEEEKRRL 130
++ GG H+ V E R G E +L
Sbjct: 247 VSCGGFHTA-----VVSEDGRLYTFGGGEHGQL 274
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG H+ L +G+++ WG+GD GRLG G +VP + L V + G H+
Sbjct: 39 ACGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTA 98
Query: 107 ALTS 110
A+T
Sbjct: 99 AVTG 102
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Query: 22 RLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHED 80
RL + +N + S++ + +CG +H+ V NG L+ WG G G+LG G E
Sbjct: 64 RLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEA 123
Query: 81 AAFVPT-LNPYLDDHVRCIALGGVHSIALTS 110
P + + V IA G H+ +T+
Sbjct: 124 GHATPKRVEALVGATVAQIACGSRHTAIVTA 154
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG FH+ +V +G+L+ +G G+ G+LG PT LD V I G HS+
Sbjct: 248 SCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCGWSHSV 307
Query: 107 ALT 109
ALT
Sbjct: 308 ALT 310
>gi|431898775|gb|ELK07147.1| X-linked retinitis pigmentosa GTPase regulator [Pteropus alecto]
Length = 1019
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGH 78
NSE + N+ V + + SCG +HS V + G+L+ +G+ + G+LG
Sbjct: 212 NSEGQIGLKNVPNVCVPHQVTVGKPIAWISCGYYHSAFVTMEGELYTFGETECGKLGLPR 271
Query: 79 EDAAF--VPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ VP L P + + V +A GG H++ LT AV
Sbjct: 272 QLLMNHKVPQLVPGIPEKVIQVACGGGHTVVLTEKAV 308
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V +A GG H
Sbjct: 346 SCGENHTALITDVGLMYTFGDGRHGKLGLGMENFTNQFIPTLCSNFLRFMVELVACGGCH 405
Query: 105 SIALTS 110
I +
Sbjct: 406 MIVFAT 411
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDA-AFVPTLNPYLDDH-VRCIALGG 102
+CG + + L NG+L+ WG+G+ G+LG G+ D +PTL L+ H V +A GG
Sbjct: 560 ACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGG 616
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G++ PTL L + +A+G +H +A
Sbjct: 3042 CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLA 3101
Query: 108 LTSLA 112
+T +
Sbjct: 3102 VTDIG 3106
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 33 NQLANLSVSKRFSNSSSCGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL 91
++L +++V+K + CG F + L G+++ WGKG+ +LG G+ED P + L
Sbjct: 657 DKLLDINVAKVY-----CGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDIL 711
Query: 92 D-DHVRCIALGGVHSIALT 109
++ + +G +H +ALT
Sbjct: 712 KTKKIKDLYIGHLHVLALT 730
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
HSG L +GK++ WG+G+ G+LG G+ + P L L +R IA G HS
Sbjct: 2883 HSGGKHALALTQDGKVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSA 2942
Query: 107 ALTS 110
A+TS
Sbjct: 2943 AITS 2946
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G L+ WGKG GRLG G + P L L D+
Sbjct: 3929 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEALQDY 3975
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIALTS 110
L G ++ WG+GD G+LG G+ + P L L + IA GG HS A+TS
Sbjct: 3885 ALSSEGHVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITS 3940
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIAL--GGVHSIALT 109
GKL+ G+G GRLG G + P P+L +V + +A+ GG H++ALT
Sbjct: 2842 GKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALT 2893
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 35 LANLSVSKRFSNSSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD- 92
LA L V K CG F L +G ++ WGKGD RLG G +D P L
Sbjct: 4026 LAGLGVIK-----VECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDDHVRRPRKVAALQG 4080
Query: 93 DHVRCIALGGVHSIALT 109
+ IA G +H +A T
Sbjct: 4081 KKIISIATGSLHCVACT 4097
Score = 35.4 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIAL--GGVHSIALTS 110
+ +GK++ G G GRLG G D+ VPTL + V+ +A+ GG H +AL+S
Sbjct: 3831 AVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS 3888
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-----------DDHVR 96
S G HS +G LW WG G GRLG GH + P + Y+ D H
Sbjct: 258 SAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSA 317
Query: 97 CIALGGV 103
CI GV
Sbjct: 318 CIDRQGV 324
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH--EDAAFVPTLNPYLDDHVRCIALGGV 103
S CG H+ L G +W+WG D G+LG G E+ + P +R IA G
Sbjct: 504 SLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSK 563
Query: 104 HSIAL 108
H +A+
Sbjct: 564 HCLAV 568
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIAL 108
G HS + G+ + WG G GRLG G A+ PT + +R +A G HS+AL
Sbjct: 699 GTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLAL 758
Query: 109 T 109
+
Sbjct: 759 S 759
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G S+ALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSVALT 674
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3053 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3112
Query: 108 LTS 110
LTS
Sbjct: 3113 LTS 3115
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 533
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 534 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3211 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3270
Query: 108 LT 109
+T
Sbjct: 3271 VT 3272
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3104 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3163
Query: 105 SIALT 109
++ALT
Sbjct: 3164 TLALT 3168
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G S+ALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSVALT 674
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 2758 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2817
Query: 108 LTS 110
LTS
Sbjct: 2818 LTS 2820
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 533
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 534 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2916 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2975
Query: 108 LT 109
+T
Sbjct: 2976 VT 2977
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 2809 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 2868
Query: 105 SIALT 109
++ALT
Sbjct: 2869 TLALT 2873
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 42.0 bits (97), Expect = 0.082, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G S+ALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRC---GSQFSVALT 674
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3057 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAA 3116
Query: 108 LTS 110
LTS
Sbjct: 3117 LTS 3119
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLEGLHGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 478 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVFSWGCGDGGRLGHGDT-- 533
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 534 --VPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3215 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3274
Query: 108 LT 109
+T
Sbjct: 3275 VT 3276
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3108 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3167
Query: 105 SIALT 109
++ALT
Sbjct: 3168 TLALT 3172
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 42.0 bits (97), Expect = 0.084, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V N G+L+ WG+GD GRLG + VPTL + V +A G H+IA
Sbjct: 515 SAGYRHSAAVTNDGELYTWGEGDFGRLGHSDSHSRNVPTLVKDISG-VGQVACGSSHTIA 573
Query: 108 L 108
+
Sbjct: 574 V 574
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFV 84
N+++ P L ++ S+S + G+++ WG GD G+LG G+
Sbjct: 439 NNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVTAEGEVFSWGDGDYGKLGHGNSATQKY 498
Query: 85 PTL--NPYLDDHVRCIALGGVHSIALTS 110
P + P L V C++ G HS A+T+
Sbjct: 499 PKIIQGPLLGKVVVCVSAGYRHSAAVTN 526
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 49 SCGLFHS-GLVVNGKL-WIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHS 105
+CG H+ + +G++ W +G GD G+LG G + + P + L +R + G S
Sbjct: 565 ACGSSHTIAVAQDGRIVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSS 624
Query: 106 IALTSLA---VEECNRCLILGEEEKRRLK 131
+ALTS C CL G E L+
Sbjct: 625 LALTSAGQVFAWGCGSCLGCGSSETTSLR 653
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS +V +GKL+ +G GD GRLG +P LD H
Sbjct: 4003 ACGFKHSAVVTADGKLFTFGSGDSGRLGQRSTSNKMIPERVTALDGH 4049
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVVFAA 366
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 12/67 (17%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-----------DDHVR 96
S G HS +G LW WG G GRLG GH + P + Y+ D H
Sbjct: 258 SAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDIVFVNAGDSHSA 317
Query: 97 CIALGGV 103
CI GV
Sbjct: 318 CIDRQGV 324
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH--EDAAFVPTLNPYLDDHVRCIALGGV 103
S CG H+ L G +W+WG D G+LG G E+ + P +R IA G
Sbjct: 504 SLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSK 563
Query: 104 HSIAL 108
H +A+
Sbjct: 564 HCLAV 568
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIAL 108
G HS + G+ + WG G GRLG G A+ PT + +R +A G HS+AL
Sbjct: 699 GTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLAL 758
Query: 109 T 109
+
Sbjct: 759 S 759
>gi|224075844|ref|XP_002304793.1| predicted protein [Populus trichocarpa]
gi|222842225|gb|EEE79772.1| predicted protein [Populus trichocarpa]
Length = 1099
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++CG++H+ VV GKL+ WG GD RLG G ++A VPT L +
Sbjct: 469 AACGVWHTAAVVEIMVGSSNSSNCSSGKLFTWGDGDKCRLGHGDKEARLVPTCVATLVEP 528
Query: 95 VRC-IALGGVHSIALTS 110
C +A G + ALT+
Sbjct: 529 NFCQVACGHSLTAALTT 545
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 29 SPNWNQLANLSVS------------KRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLG 75
SP + QL N K F +CG +H ++ + +++ WGKG GRLG
Sbjct: 554 SPVYGQLGNPQADGMLPTRVEGKLMKNFVEELACGAYHVAVLTSRTEVYTWGKGANGRLG 613
Query: 76 FGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G D P++ L D V+ I G + A+
Sbjct: 614 HGDADDRNSPSVVEALKDKQVKGIVCGTSFTAAI 647
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L + +V +A G HS
Sbjct: 311 ACGRQHAALVTKQGEVFSWGEELGGRLGHGVDSDVSHPKFVDGLKNFNVELVACGEYHSC 370
Query: 107 ALT 109
A+T
Sbjct: 371 AVT 373
>gi|326496164|dbj|BAJ90703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 907
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG+ H+ LV NG+++ WG+ GGRLG G + + P L L ++ +A G H+ A
Sbjct: 84 CGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAASNIDFVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + VPT L D VR IA G +
Sbjct: 356 ACGSYHVAVLTSRSEVFTWGKGANGRLGHGDVEDRKVPTTVEALRDRAVRHIACGANFTA 415
Query: 107 AL 108
A+
Sbjct: 416 AI 417
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ +V GKL+ WG GD RLG G ++A PT L D+
Sbjct: 242 ACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDF 301
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 302 YRVACGHSLTVGLTT 316
>gi|167538032|ref|XP_001750682.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163770816|gb|EDQ84495.1| predicted protein [Monosiga brevicollis MX1]
Length = 1428
Score = 42.0 bits (97), Expect = 0.089, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 25/45 (55%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
+CG H + +L+ WG G+ GRLG G ED F PTL P D
Sbjct: 71 ACGDRHVMARLENQLYAWGCGEYGRLGLGDEDDRFEPTLVPLHGD 115
>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
purpuratus]
Length = 1139
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 46 NSSSCGLFHSGLVVNGKLWIWGKGDGGRLGF-------GHEDAAFVPTLNPYLDDHVRCI 98
N +CG H+ +V NG ++ WG+ GRLG G V TL+ + HVR +
Sbjct: 775 NVLACGQDHAAIVANGDVYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMH-GIHVRAV 833
Query: 99 ALGGVHSIALT 109
A G H++A+T
Sbjct: 834 ACGKEHTMAVT 844
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSI 106
S G HSG + N G++W++G G+LG G + VP L HV + G +I
Sbjct: 938 SAGYAHSGALTNDGQVWMFGSSSFGQLGTGSIGKSTVPVRLKALSSHHVSILTCGYYSNI 997
Query: 107 ALTS 110
A+TS
Sbjct: 998 AITS 1001
>gi|303271437|ref|XP_003055080.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463054|gb|EEH60332.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1071
Score = 42.0 bits (97), Expect = 0.090, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVPT 86
SCG++H+ VV+ G+L+ WG GDGG+LG D VPT
Sbjct: 475 SCGVWHTAAVVDDGQLYTWGDGDGGKLGHADVTDDVPVPT 514
>gi|444917320|ref|ZP_21237422.1| hypothetical protein D187_10036 [Cystobacter fuscus DSM 2262]
gi|444711215|gb|ELW52165.1| hypothetical protein D187_10036 [Cystobacter fuscus DSM 2262]
Length = 773
Score = 41.6 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
+G LW WG D G+LG G +A P P L D V +A G +HS+AL
Sbjct: 57 HGALWAWGYNDFGQLGDGTANAHLTPIRVPGLQD-VEAVANGSLHSLAL 104
>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
Length = 513
Score = 41.6 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-I 98
V R S SC + V GKLW WG+ D G+LG G VP L L V
Sbjct: 139 VQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHA 198
Query: 99 ALGGVHSIALT 109
A G H++ALT
Sbjct: 199 ACGRNHTLALT 209
>gi|395855000|ref|XP_003799962.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Otolemur
garnettii]
Length = 816
Score = 41.6 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGH 78
NSE + N+ V + + SCG +HS V ++G+L+ +G+ + G+LG
Sbjct: 167 NSEGQIGLKDVTNVCVPHQVTIGKPISWISCGYYHSAFVTIDGELYTFGESESGKLGLPS 226
Query: 79 E--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ +P L + D V +A GG H++ LT +V
Sbjct: 227 QLLTNHRIPQLVSSIPDKVIQVACGGGHTLVLTEESV 263
Score = 36.2 bits (82), Expect = 4.6, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 47 SSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPT-LNPYLDDHVRCIALGG 102
S SCG H+ ++ + G ++ +G G G+LG G E+ F PT + +L V+ +A GG
Sbjct: 299 SISCGENHTAMITDTGGIYTFGDGRHGKLGLGLENFTNRFFPTPCSVFLKFMVQLVACGG 358
Query: 103 VHSIALTS 110
H + +
Sbjct: 359 CHMLVFAT 366
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG HS +V N KL+++G + G+LG G + A PT L + V+ A G H+I
Sbjct: 41 SCGDEHSAIVTGNNKLYMFGSNNWGQLGLGSKAAVNKPTCIKALKPEKVKFAACGRTHTI 100
Query: 107 ALT 109
T
Sbjct: 101 IST 103
>gi|195053470|ref|XP_001993649.1| GH19978 [Drosophila grimshawi]
gi|193895519|gb|EDV94385.1| GH19978 [Drosophila grimshawi]
Length = 1982
Score = 41.6 bits (96), Expect = 0.093, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALT 109
G +H+ V +GKL++WG G G+LG G+ + PTL + + I+LG HS+ L
Sbjct: 1250 GQYHNAAVADGKLYMWGWGIYGQLGNGNCENLATPTLVSFFKYKKILQISLGHAHSLVLC 1309
Query: 110 SL---------AVEECNRCLILG 123
A CN + G
Sbjct: 1310 QATCSSNNYAEANRSCNELYVFG 1332
>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Hydra magnipapillata]
Length = 731
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIAL 108
G HS L ++G ++ WGK G+LG G + PT + HVR I+ G HS+ L
Sbjct: 127 GGHHSLALTISGTIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYISCGEEHSVLL 186
Query: 109 TS 110
TS
Sbjct: 187 TS 188
>gi|328712024|ref|XP_001948029.2| PREDICTED: hypothetical protein LOC100158844 [Acyrthosiphon pisum]
Length = 1626
Score = 41.6 bits (96), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 39 SVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
S+S S S G +HS + +G+LW WG G G+LG G D P L L++
Sbjct: 896 SLSNELIVSVSAGQYHSLAISASGQLWTWGWGVYGQLGHGAIDDCEKPKLLKSLENENII 955
Query: 98 IALGGV-HSIALTS 110
A GG HSI LTS
Sbjct: 956 SAYGGYSHSIILTS 969
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 41.6 bits (96), Expect = 0.095, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIA+T
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRC---GSQFSIAIT 673
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F + +G+++ WGKGD RLG G E+ P +N V +A+G H +A
Sbjct: 664 CGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDVAVGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-D 93
L+N V K +S G + L V+GK++ WG+GD G+LG P L L
Sbjct: 3046 LSNYVVKKVAVHSG--GRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTK 3103
Query: 94 HVRCIALGGVHSIALTS 110
+R IA G HS A+TS
Sbjct: 3104 RIRDIACGSSHSAAITS 3120
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG + + + +G+L+ WG+G+ GRLG G + VP L
Sbjct: 557 ACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVPML 596
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 46 NSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDHVRCIALGG 102
+S SCG +HS L+ +G+L+ +G+ + G+LG E VP P + + V +A GG
Sbjct: 188 SSISCGYYHSALITGDGELYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVNKVACGG 247
Query: 103 VHSIALTSLAV 113
H++ LT V
Sbjct: 248 EHTVVLTETDV 258
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ +V NG ++ +G G G+LG G E+ F PTL +L V +A GG H
Sbjct: 296 TCGENHTAVVAENGLMFTFGDGRHGKLGLGEENYTNQFDPTLCYNFLRFTVLLVACGGCH 355
Query: 105 SIALTS 110
+ +
Sbjct: 356 MLVFAA 361
>gi|443710462|gb|ELU04715.1| hypothetical protein CAPTEDRAFT_111937 [Capitella teleta]
Length = 689
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGV 103
SCG H V N ++ WG+GD GRLG GH+++ P P + + AL GV
Sbjct: 458 SCGASHVMAVTNEHDVFSWGRGDNGRLGLGHQESCCSPCRVPLMPETQPISALCGV 513
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAA-FVPTLNPYL-DDHVRCIALGGVHS 105
+ G +HS L G+++ WG+G+ GRLGFG + ++ VP L + + ++ GG HS
Sbjct: 261 AAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHS 320
Query: 106 IALT 109
+ALT
Sbjct: 321 VALT 324
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+ G FH+ L +G LW WG + G+LG G P L D + IA GG HS
Sbjct: 209 AVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHST 268
Query: 107 ALT 109
ALT
Sbjct: 269 ALT 271
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 41.6 bits (96), Expect = 0.098, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 47 SSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH--EDAAFVPTLNPYLDD--HVRC--IA 99
S +CG H+ + + G+L++WG + GRLG G E P L P D RC ++
Sbjct: 910 SVACGDIHAAALTDKGQLYMWGSSEAGRLGDGRSTEGVTRTPKLVPAFADIHQARCLGVS 969
Query: 100 LGGVHSIALTS 110
+G H++A++S
Sbjct: 970 IGPRHALAISS 980
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVPTLNPYLDDHVRC-IALGGVHS 105
+CG FHS V G L+ WG+G G+LG G D A + + D + +A G HS
Sbjct: 741 ACGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACGENHS 800
Query: 106 IALTSLAV 113
A+ S V
Sbjct: 801 AAVDSAGV 808
>gi|322702426|gb|EFY94076.1| Ran exchange factor Prp20/Pim1, putative [Metarhizium anisopliae
ARSEF 23]
Length = 539
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 66 WGKGDGGRLGFG-HEDAAFVPTLNPYLDD------HVRCIALGGVHSIALTS 110
+G G+ G LG G AA VP NP LD H+ +A GG+H+IALT+
Sbjct: 112 FGSGECGELGLGPKRTAALVPKFNPALDPNEASKYHIVQLACGGMHTIALTA 163
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ H+ LV NG ++ WG+ GGRLG G + + P L L +V +A G H+ A
Sbjct: 161 CGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCA 220
Query: 108 LTS 110
+T+
Sbjct: 221 VTT 223
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ +V GKL+ WG GD RLG G +++ PT L D+
Sbjct: 319 ACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDF 378
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 379 YRVACGHSLTVCLTT 393
Score = 37.0 bits (84), Expect = 2.7, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ +++ WGKG GRLG G + VPT L D VR IA G +
Sbjct: 434 ACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTA 493
Query: 107 AL 108
A+
Sbjct: 494 AI 495
>gi|145483825|ref|XP_001427935.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124395018|emb|CAK60537.1| unnamed protein product [Paramecium tetraurelia]
Length = 887
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 46 NSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH--EDAAFVPTLNPYLDDHVRCIALGGV 103
++ +CG +H+ + NG L+ WG+G G+LG E AA L+ + + ++ IA G
Sbjct: 136 DTIACGEYHTLALSNGDLFAWGRGFEGQLGIRKDVETAASPMFLSYFYKNKIQLIACGAY 195
Query: 104 HSIAL 108
HS+A+
Sbjct: 196 HSLAV 200
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 8/76 (10%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNP-----YLDD 93
VS R + SCG H + L NG ++ WG+ G L GH D + VP L+P +
Sbjct: 872 VSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGEL--GHGDKSGVPQLHPKQVIFFKSK 929
Query: 94 HVRCIALGGVHSIALT 109
V+ + GG H++A T
Sbjct: 930 CVKEVVCGGEHTLART 945
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ L+ NG ++ +G G G+LG G E+ FVPTL + +L V +A GG H
Sbjct: 301 ACGENHTALITENGLMYTFGDGRHGKLGLGEENYTNQFVPTLCSNFLRFIVHSVACGGCH 360
Query: 105 SIALTSLAVEECNR 118
+ S +E ++
Sbjct: 361 MLVFASPRHKESDK 374
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG H+ +V NGKL+++G + G+LGFG ++A PT L + V+ A G H++
Sbjct: 41 SCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHTL 100
Query: 107 ALT 109
T
Sbjct: 101 ICT 103
>gi|270015228|gb|EFA11676.1| hypothetical protein TcasGA2_TC008540 [Tribolium castaneum]
Length = 835
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 27 ENSPNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
+ SP + NL+ K S+ G +H+ L +G+++ WG G G+LG G D + P
Sbjct: 450 QESPYPQIITNLAFKKMVQVSA--GQYHTIALSSSGEVYTWGWGIHGQLGHGDCDNIYYP 507
Query: 86 TLNPYLDDHVRCIALGGVHSIALT 109
L P+ V+ +A G HS+ LT
Sbjct: 508 KLLPFQHKVVQ-VAAGHAHSLILT 530
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRC 97
V + ++ +CG H+ ++ + +W WG G+ G+LG G E+ P + L V
Sbjct: 194 VQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIH 253
Query: 98 IALGGVHSIALTSLAV 113
I+ GG HS ALTS V
Sbjct: 254 ISTGGFHSAALTSEGV 269
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHS 105
+CG H+ L+ NG+L+ WG G+ GRLG G E P L L V +A GG HS
Sbjct: 99 ACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHS 157
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAA-FVPTLNPYL-DDHVRCIALGGVHS 105
+ G +HS L G+++ WG+G+ GRLGFG + ++ VP L + + ++ GG HS
Sbjct: 261 AAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQVSCGGTHS 320
Query: 106 IALT 109
+ALT
Sbjct: 321 VALT 324
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+ G FH+ L +G LW WG + G+LG G P L D + IA GG HS
Sbjct: 209 AVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHST 268
Query: 107 ALT 109
ALT
Sbjct: 269 ALT 271
>gi|340054997|emb|CCC49305.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 622
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVP--TLNPYLDDHVRCIALGGVHS 105
+ G +HSG + V G+L+ WG G RLG G + P L + +HV +A G H+
Sbjct: 405 NAGQWHSGAISVAGELFTWGVGFQWRLGHGSNEPGLRPQRVLGALVGEHVVDVACGSFHT 464
Query: 106 IALT 109
+ALT
Sbjct: 465 VALT 468
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL--DDHVRCIALGGVHS 105
+ G +HS L + G+++ WG+G+ GRLGFG + ++ + L L + + ++ GG HS
Sbjct: 258 AAGGWHSTALTIQGEVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIVQVSCGGTHS 317
Query: 106 IALT 109
+ALT
Sbjct: 318 VALT 321
>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
Length = 497
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-I 98
V R S SC + V GKLW WG+ D G+LG G VP L L V
Sbjct: 139 VQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHA 198
Query: 99 ALGGVHSIALT 109
A G H++ALT
Sbjct: 199 ACGRNHTLALT 209
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 29/60 (48%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
G + L +G +W WG+ D G+LG G P L V IA GG H+ ALTS
Sbjct: 273 GRYTCALTSSGGVWCWGRNDSGQLGDGSFTNRSTPGAVGGLPSGVTAIAAGGAHTCALTS 332
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 26/60 (43%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
G L +G +W WG D G+LG G P L V IA GG H+ A TS
Sbjct: 324 GAHTCALTSSGGVWCWGGNDSGQLGDGSYTDRSTPGAVSGLPSGVTAIAAGGAHTCARTS 383
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +H+ L +G++W WG G+LG G P L V IA GG H+ A
Sbjct: 66 AAGSWHTCALTGSGEVWCWGYNWSGQLGDGSYTDRSTPVAVSGLPSGVTAIAAGGAHTCA 125
Query: 108 LTS 110
LTS
Sbjct: 126 LTS 128
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +H+ L +G +W WG+ D G+LG G P L V IA G H+ A
Sbjct: 474 AAGNYHTCALTSSGGVWCWGRNDSGQLGDGTTTNRSTPGAVGGLPSGVTAIAAGDYHTCA 533
Query: 108 LTS 110
L S
Sbjct: 534 LMS 536
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 39 SVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVR 96
S+ ++ +CG FHS ++ +GK++ +G G+ G+LG + PTL LD V+
Sbjct: 186 SLIGKYPCQVACGGFHSAVITRDGKMYTFGGGEHGQLGHADKVNKLKPTLVEALDGVVVK 245
Query: 97 CIALGGVHSIALTS 110
I G HS+ALTS
Sbjct: 246 QITCGWSHSVALTS 259
Score = 35.4 bits (80), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IAL 100
K+ S+CG + L + + + WG+G GRLG G E P L L C +A
Sbjct: 138 KKVVQLSACGFHTACLTDDHETFAWGEGKFGRLGNGTERNCHSPRLIESLIGKYPCQVAC 197
Query: 101 GGVHSIALT 109
GG HS +T
Sbjct: 198 GGFHSAVIT 206
>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 393
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED--AAFVPT-LNPYLDDHVRCIALGGVH 104
+ G +HS L G+++ WG+G+ GRLGFG D + VP +N ++ + ++ GG H
Sbjct: 254 AAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTH 313
Query: 105 SIALT 109
S+ALT
Sbjct: 314 SVALT 318
>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVH 104
S G HS + +GKL++WG+ GG+LG G V T ++ D ++ +ALG H
Sbjct: 124 SAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDFRIKMVALGSEH 183
Query: 105 SIALT 109
SIA+T
Sbjct: 184 SIAVT 188
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYL----DDHVRCIALGGVHSIALT 109
+WG GD GRLG G ++ + PT+ P+ D +A GG H++ LT
Sbjct: 34 LWGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLT 82
>gi|380803301|gb|AFE73526.1| X-linked retinitis pigmentosa GTPase regulator isoform A, partial
[Macaca mulatta]
Length = 220
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE + N+ V + + SCG +HS V +G+L+++G+ +
Sbjct: 90 RLFMWGDNSEGQIGLKNVTNVCVPHQVTIGKPVSWISCGYYHSAFVTTDGELYMFGEPEN 149
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 150 GKLGLPNQLLSNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 193
>gi|297791865|ref|XP_002863817.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
gi|297309652|gb|EFH40076.1| hypothetical protein ARALYDRAFT_917597 [Arabidopsis lyrata subsp.
lyrata]
Length = 1083
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV- 95
+CG++H+ +V +GKL+ WG GD RLG G +++ PT L DH
Sbjct: 442 ACGVWHAAAIVEVIVTQSTSSISSGKLFTWGDGDKSRLGHGDKESRLKPTCVSALIDHTF 501
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 502 HRVACGHSLTVGLTT 516
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + P+L L + HV+ IA G +
Sbjct: 557 ACGAYHVAVLTSRNEVFTWGKGANGRLGHGDIEDRKAPSLVDTLKERHVKNIACGSNFTA 616
Query: 107 AL 108
A+
Sbjct: 617 AI 618
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG+ H+ LV G+++ WG+ GGRLG G P L L V +A G H+
Sbjct: 283 ACGVRHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSVDFVACGEFHTC 342
Query: 107 ALT 109
A+T
Sbjct: 343 AVT 345
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHSI 106
SCG FH+ L G+++ WG G G+LG G+ D +P +L D V + IA G HS+
Sbjct: 934 SCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIAAGHGHSL 993
Query: 107 ALT 109
L+
Sbjct: 994 VLS 996
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE + N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVTNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDH-VRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL V+ +A GG H
Sbjct: 301 SCGESHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFSRFIVKLVACGGCH 360
Query: 105 SIALTS--------LAVEECNRCL 120
+ + + +E N CL
Sbjct: 361 MVVFAAPRRGVAKEIEFDEINTCL 384
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG HS +V N KL+++G + G+LG G + A PT L + V+ A G H++
Sbjct: 41 SCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAVSKPTCVKALKPEKVKLAACGRNHTL 100
Query: 107 ALT 109
T
Sbjct: 101 VST 103
>gi|209155120|gb|ACI33792.1| RCC2 homolog [Salmo salar]
Length = 569
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 54 HSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIALT 109
HS L+ GKLW WG+ + G+LG G P L P D+ V A G H++ALT
Sbjct: 208 HSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEPLADEVVVAAACGRNHTLALT 265
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 11/110 (10%)
Query: 5 DEELYIFSL--MAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVN-G 61
+EE+Y F L + L +F + L N + +CG H+ L+ + G
Sbjct: 260 EEEVYTFGLGQFGQLGLGTFIFETSEPKVVKHLQNQKI-----QYIACGENHTALISDTG 314
Query: 62 KLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVHSIAL 108
++ +G G G+LG G E+ FVPTL + +L VR +A GG H +
Sbjct: 315 HMYTFGDGRHGKLGLGQENFTNQFVPTLCSNFLKFIVRLVACGGCHMLVF 364
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
NSE + AN+ V + SCG +HS V G+L+ +G+ + G+LG
Sbjct: 167 NSEGQIGLAEEANVCVPSEVTIGKPISWISCGYYHSAFVTTEGELYTFGEPENGKLGLSP 226
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALT 109
E +P L + V +A GG H++ALT
Sbjct: 227 EQLKNHRIPQLVLGIPGKVNQVACGGGHTVALT 259
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ H+ LV NG ++ WG+ GGRLG G + + P L L +V +A G H+ A
Sbjct: 84 CGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ +V GKL+ WG GD RLG G +++ PT L D+
Sbjct: 242 ACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDF 301
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 302 YRVACGHSLTVCLTT 316
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ +++ WGKG GRLG G + VPT L D VR IA G +
Sbjct: 357 ACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTA 416
Query: 107 AL 108
A+
Sbjct: 417 AI 418
>gi|345856409|ref|ZP_08808895.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
gi|344330533|gb|EGW41825.1| cell wall binding repeat 2 family protein [Desulfosporosinus sp.
OT]
Length = 1419
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
+ +GK+W WG G+LG G + P L P L D V +++G H +AL S
Sbjct: 666 AITADGKVWAWGNNQDGQLGDGTTNNQSTPVLVPGLSD-VTTVSVGWTHCLALKS 719
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLN 88
+S +S + G + L +G +W WG G LG G +D FVP+ N
Sbjct: 341 LSGTYSAVACLGWYDLALKTDGTVWAWGNNMNGELGDGTKDNHFVPSQN 389
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-----NPYLDDHVRCIALGGVHS 105
G + L G+++ WG GDGGRLG G ++ PTL L HV I G +S
Sbjct: 248 GKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYS 307
Query: 106 IALTS 110
A+T+
Sbjct: 308 AAITA 312
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSIA 107
CG F L G +W WGKGD RLG G E+ P L V +A+G +H +
Sbjct: 408 CGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVAVGSMHCLV 467
Query: 108 LT 109
+T
Sbjct: 468 MT 469
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
CG + + + +G+L+ WG+G+ GRLG G + PTL
Sbjct: 302 CGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTL 340
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 34 QLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
+L ++ V++ + S F L +G ++ WGKGD RLG G E+ P L L+
Sbjct: 675 KLQDIEVARVYCGSQ----FSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNG 730
Query: 94 H-VRCIALGGVHSIALT 109
++ +A+G H +ALT
Sbjct: 731 KCIKKVAVGSGHVLALT 747
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTS 110
L +GK++ WG+GD G+LG G+++ P L L + IA GG HS A+T+
Sbjct: 4069 ALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTA 4124
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
SCG +S V + G+++ WG+G+ GRLG G + VPTL L D+
Sbjct: 579 SCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDY 625
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIALTS 110
L +G ++ WG GDGGRLG G ++ PT + + +V I+ G +S A+TS
Sbjct: 535 ALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYSAAVTS 590
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G ++ WGKGD RLG G ++ P L + CIA G +H +A
Sbjct: 4220 CGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVA 4279
Query: 108 LTSL 111
+ L
Sbjct: 4280 CSDL 4283
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVP----TLNPYLDDHVRCIALGGVHSIALT 109
+GKL+ G+G GRLG GH + P +LN Y+ V + GG H++ALT
Sbjct: 3036 DGKLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKV-AVHSGGKHAMALT 3088
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG F L G+++ WGKGD RLG G + PTL L + + +A+G +H +
Sbjct: 3237 CGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVHVAVGALHCLC 3296
Query: 108 LT 109
T
Sbjct: 3297 AT 3298
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ H+ LV NG ++ WG+ GGRLG G + + P L L +V +A G H+ A
Sbjct: 84 CGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ +V GKL+ WG GD RLG G +++ PT L D+
Sbjct: 242 ACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDF 301
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 302 YRVACGHSLTVCLTT 316
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ +++ WGKG GRLG G + VPT L D VR IA G +
Sbjct: 357 ACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTA 416
Query: 107 AL 108
A+
Sbjct: 417 AI 418
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCI--ALGGV 103
S +CG FH+ + + G +W WG+ G+LG G+ + PT + + CI A GG
Sbjct: 146 SIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKI-CIRAACGGQ 204
Query: 104 HSIALT 109
H++ LT
Sbjct: 205 HTLVLT 210
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 50 CGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG HS L+ N +++ WG+ D G+LG GH + VP L L V+ IA G H +A
Sbjct: 254 CGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVA 313
Query: 108 LTSLAVE 114
+ VE
Sbjct: 314 FVADEVE 320
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVVFAA 366
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVVFAA 366
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ H+ LV NG ++ WG+ GGRLG G + + P L L +V +A G H+ A
Sbjct: 84 CGVRHAALVTRNGDVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ +V GKL+ WG GD RLG G +++ PT L D+
Sbjct: 242 ACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDF 301
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 302 YRVACGHSLTVCLTT 316
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ +++ WGKG GRLG G + VPT L D VR IA G +
Sbjct: 357 ACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQVEALKDRAVRHIACGANFTA 416
Query: 107 AL 108
A+
Sbjct: 417 AI 418
>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 41.6 bits (96), Expect = 0.12, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY----LDDHVRCIALGGVH 104
SCG H G++ N KL++ G+G G+LG G E + P + Y + ++V IA GG H
Sbjct: 336 SCGQAHVGIISNNKLYMHGRGKEGQLGRGSETES--PNSSRYSPLLVLENVLKIACGGSH 393
Query: 105 SIALTS 110
S A+ +
Sbjct: 394 SFAIVN 399
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGL-VVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CGL+H+ + G+L+ GK D G+LG H +PTL ++ V +A G HS+
Sbjct: 527 ACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIKLPTLVALPNEMVSFVACGYYHSVV 586
Query: 108 LTS 110
+++
Sbjct: 587 VST 589
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 39 SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL----NPYLDD 93
S+S+ + +CG FHS L +G LW+WG + G+LG G+ + +P+L N D
Sbjct: 344 SLSEHKISRVACGSFHSAALAEHGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHD 403
Query: 94 HVRCIALGGVHSIALT 109
V +A G HS +T
Sbjct: 404 AVMEVACGDQHSAFIT 419
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-SCGLFHSGLVVNG-KLWIWGKGDGGRLGFGHEDAA 82
N ++ +N + V F +CG H+ +V +G +++ WG+G GGRLG G
Sbjct: 442 NQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNR 501
Query: 83 FVPT-LNPYLD-DHVRCIALGGVHSIALTSLA------VEECNRCLILGEEEKRR 129
+PT + ++ HVR ++ G H+ + A V+ C C +RR
Sbjct: 502 HLPTEIEIGMEGKHVRGVSCGRAHTACTVTRAWVPDQEVKTCMACKTRFTTVRRR 556
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 13/68 (19%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CG H+ L +G+++ WG G GGRLG GH F P I + G+ S+
Sbjct: 246 ACGATHTLALSKDGEVFSWGSGYGGRLGQGHLRDRFTP------------IRICGLESLN 293
Query: 108 LTSLAVEE 115
LT +A E
Sbjct: 294 LTQVACNE 301
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G ++ P L L V IA+G H +A
Sbjct: 615 CGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDIAVGSTHCLA 674
Query: 108 LT 109
LT
Sbjct: 675 LT 676
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D + + G S+ALT
Sbjct: 574 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALT 624
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 3015 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3074
Query: 107 ALTS 110
A+TS
Sbjct: 3075 AITS 3078
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGH----EDAAFVPTLN-PYLDDHVRCIALGGVHSIALTS 110
L +G+++ WG GDGGRLG G E+ A + T + V IA G +S A+T+
Sbjct: 460 ALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVTA 519
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3174 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVHVAVGALHCLA 3233
Query: 108 LT 109
+T
Sbjct: 3234 VT 3235
>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
lyrata]
gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
lyrata]
Length = 1867
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ +V + KL+ WG GD RLG G+++ +PT ++ +D + +
Sbjct: 1246 ACGVWHTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFQ 1305
Query: 97 CIALGGVHSIALTS 110
IA G ++ALT+
Sbjct: 1306 QIACGHTLTVALTT 1319
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIA 99
F SCG H ++ + +++ WGKG GRLG G ++ PTL L + HV+ I+
Sbjct: 1355 FVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKEDRKTPTLVEALKERHVKSIS 1412
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG+ H LV G+++ WG+ GGRLG G + P L +L ++ +A G H+
Sbjct: 1087 ACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNIDFVACGEYHTC 1146
Query: 107 ALTS 110
A+++
Sbjct: 1147 AVST 1150
>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H S L +++ WGKG GRLG G + VPTL L D VR IA G +
Sbjct: 356 ACGSYHVSVLTSRSEVFTWGKGANGRLGHGDIEDQKVPTLVEALKDRSVRHIACGANFTA 415
Query: 107 AL 108
A+
Sbjct: 416 AI 417
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ H+ LV +G+++ WG+ GGRLG G + + P L L ++ +A G H+ A
Sbjct: 84 CGVRHASLVTRSGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ +V GKL+ WG GD RLG G ++A PT L D+
Sbjct: 242 ACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLIDYDF 301
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 302 YRVACGHSLTVGLTT 316
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
G F L +G +W WG G LG G +VP L D V IA GG HS+A+T
Sbjct: 193 GYFSLALKSDGTVWAWGVNGDGELGDGTTTDRYVPVQVAGLTD-VMAIAAGGSHSLAVT 250
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G +HS L G +W WG +LG G ++ +P ++ HVR IA GG HS+A+
Sbjct: 292 GGYHSLALDRTGNVWSWGDNSQRQLGVGSNASSLIPVPVSGIE-HVREIAAGGFHSVAM 349
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 53 FHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
+HS L +G +W WGK D G LG G P L+D V IA GG S+AL S
Sbjct: 144 YHSMALSEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLND-VTAIAAGGYFSLALKS 201
>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
Length = 1056
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVVNG-----------KLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++HS +V KL+ WG GD RLG G ++A +PT + L+ +
Sbjct: 422 ACGVWHSAAIVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHNFH 481
Query: 97 CIALGGVHSIALTS 110
+A G ++AL +
Sbjct: 482 QLACGQNMTVALAT 495
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
SCG H ++ + +++ WG G GRLG G + PT+ L D HV+ I+ G
Sbjct: 536 SCGAAHVAVLTSRSEVYTWGMGANGRLGHGDLNDKKAPTIVEALKDRHVKSISCG 590
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP----TLNPYLDDHVRCIALGGV 103
+CG +HS L+ + G+L+ +G G G LG G+ +++ P LN + V C G
Sbjct: 370 ACGSWHSALITSTGRLYTFGDGTFGALGHGNRESSAYPKEVEALNGFRTIKVAC---GVW 426
Query: 104 HSIALTSLAVEE-----CNRCLILGEEEKRRL 130
HS A+ V+ + G+ +K RL
Sbjct: 427 HSAAIVEATVQTGMNMVSKKLYTWGDGDKNRL 458
>gi|260814706|ref|XP_002602055.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
gi|229287360|gb|EEN58067.1| hypothetical protein BRAFLDRAFT_228262 [Branchiostoma floridae]
Length = 833
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLG-------FGHEDAAFV---PTLNPYLDDHV 95
S S G HS V +G+L+ WG+GD GRLG GH D V + + ++
Sbjct: 520 SISAGYRHSAAVTEDGELFTWGEGDYGRLGHGDSNRKLGHGDTNRVYKPKVIEALVGLYI 579
Query: 96 RCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
R + G S+ALTS L C CL G E L+
Sbjct: 580 RKVCCGSQSSLALTSTGQLFAWGCGACLGCGSPESTALR 618
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG
Sbjct: 172 VGRKFPSTTAPQIVEHLAGIPLAQ-----ISAGEAHSMALSMSGNIYSWGKNEFGQLGLD 226
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG H+ LT
Sbjct: 227 HTESKDSPSLIEALDNQKVEFLACGGSHTALLTQ 260
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ I L G
Sbjct: 144 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTAPQIVEHLAGIPLAQISAGE 200
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 201 AHSMALS 207
>gi|356559685|ref|XP_003548128.1| PREDICTED: uncharacterized protein LOC100813700 [Glycine max]
Length = 1120
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + P L L D HV+ IA G +S
Sbjct: 558 ACGAYHVAVLTSKNEVYTWGKGANGRLGHGDIEDRKTPALVEALKDRHVKYIACGSNYSA 617
Query: 107 AL 108
A+
Sbjct: 618 AI 619
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 13/74 (17%)
Query: 49 SCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHV 95
+CG++H+ VV +GKL+ WG GD RLG G ++A PT + +D +
Sbjct: 443 ACGVWHTAAVVEVIATHSSTSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVAALIDSNF 502
Query: 96 RCIALGGVHSIALT 109
IA G + LT
Sbjct: 503 HKIACGHSLTAGLT 516
>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 10/56 (17%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
++ ++F N+ SCG KL+ WG GD GRLG VPT L DH
Sbjct: 465 AIDRKFYNAKSCG----------KLFTWGDGDKGRLGHADNKRKLVPTCVTELIDH 510
>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 722
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
S+SK+ S G FHS + N G+L+ WG+ G+LG G A P + + ++
Sbjct: 262 SLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQAKADIFPKEVQALQNTYIV 321
Query: 97 CIALGGVHSIALT 109
+A G H++AL+
Sbjct: 322 SVACGEGHTLALS 334
>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 1032
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 29 SPNWNQLANLSVSKR-----------FSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGF 76
S + QL N V R + SCG +H L +G ++ WGKG+ G LG
Sbjct: 552 SAKYGQLGNPHVKDRAVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGL 611
Query: 77 GHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G + + P L D V I G ++A+
Sbjct: 612 GDTENRYTPCFVEALRDRQVDTITCGPSFTVAI 644
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 13/78 (16%)
Query: 47 SSSCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
S +CG +H+ ++ GKL+ WG D GRLG VPT L D+
Sbjct: 467 SVACGTWHTAAIIEISAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDY 526
Query: 95 -VRCIALGGVHSIALTSL 111
++ G + ++ALT++
Sbjct: 527 DFVQVSCGRMMTLALTNM 544
>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
Length = 546
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 57 LVVN--GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--IALGGVHSIALT 109
LV+N G+++ +G GD GRLG G+++ + PT L+ RC IA G HS+ALT
Sbjct: 391 LVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSALESE-RCVSIAAGFAHSVALT 446
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 36 ANLSVSKRFSNSS-SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
A LS+ +R S+ S G H V + G ++ WG+G G+LG G + +P P +
Sbjct: 265 AGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKG 324
Query: 94 HVRCIALGGVHSIALT 109
V+ ++ G H++A+T
Sbjct: 325 EVKSVSAGFYHTVAVT 340
>gi|195168454|ref|XP_002025046.1| GL26838 [Drosophila persimilis]
gi|194108491|gb|EDW30534.1| GL26838 [Drosophila persimilis]
Length = 828
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VHS 105
CG +S + +G L+ WG+G RLG G+ D +PT+ L +H + +ALG HS
Sbjct: 252 CGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHS 311
Query: 106 IALTS 110
+ LTS
Sbjct: 312 LCLTS 316
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 22 RLFNSENSPNWNQLANLSVSKRFSNSSSC-GLFHSGLVVNGKLWIWGKGDGGRLGFGHED 80
R+F E P L ++ S +S C G + +N + WG G+ RLG G
Sbjct: 175 RMFKPETEPQL--LEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTH 232
Query: 81 AAFVPTLNPYLDDHVRCIALGGVHSIALT 109
A VPT LD V+ + G +S A+T
Sbjct: 233 ARAVPTKINSLDRCVKAVFCGCSYSAAIT 261
>gi|428182763|gb|EKX51623.1| hypothetical protein GUITHDRAFT_65920, partial [Guillardia theta
CCMP2712]
Length = 311
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
L +L S+ ++ SS G L + KL IWGKG GRLG G+E +VP +
Sbjct: 150 LQDLKESQVITSISSRGFHACALTDDDKLLIWGKGVSGRLGLGNEVDQYVPII 202
>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1054
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGL-----------VVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++HS VV+ KL+ WG GD RLG G ++A +PT L L+ +
Sbjct: 421 ACGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHNFH 480
Query: 97 CIALGGVHSIALTS 110
+ G ++AL +
Sbjct: 481 QLGCGQNMTVALAT 494
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 13/94 (13%)
Query: 47 SSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP----TLNPYLDDHVRCIALG 101
S +CG +HS L+ + G+L+ +G G G LG G+ ++A P LN + V C G
Sbjct: 367 SVACGSWHSALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEALNGFRTVKVAC---G 423
Query: 102 GVHSIALTSLAVEE-----CNRCLILGEEEKRRL 130
HS A+ +V+ + G+ +K RL
Sbjct: 424 VWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRL 457
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
SCG H ++ + +++ WG G GRLG G + PT+ L D HV+ I+ G
Sbjct: 535 SCGAAHVAVLTSRSEVYTWGLGANGRLGHGDLNDKKTPTIVEALKDRHVKSISCG 589
>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
Length = 1035
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 29 SPNWNQLANLSVSKR-----------FSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGF 76
S + QL N V R + SCG +H L +G ++ WGKG+ G LG
Sbjct: 551 SAKYGQLGNPHVKDRAVVVEGMLKQEYVKMISCGSYHVAVLTSSGSVYTWGKGENGELGL 610
Query: 77 GHEDAAFVPTLNPYL-DDHVRCIALGGVHSIAL 108
G + + P L D V I G ++A+
Sbjct: 611 GDTENRYTPCFVEALRDRQVDTITCGPSFTVAI 643
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 13/78 (16%)
Query: 47 SSSCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
S +CG +H+ ++ GKL+ WG D GRLG VPT L D+
Sbjct: 466 SVACGTWHTAAIIEVSAERFKYNTSTGKLFTWGDADEGRLGHADNVNKLVPTCVSQLVDY 525
Query: 95 -VRCIALGGVHSIALTSL 111
++ G + ++ALT++
Sbjct: 526 DFVQVSCGRMMTLALTNM 543
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED--AAFVPTLNPYL--DDHVRCIALGGV 103
+ G +HS L G+++ WG+G+ GRLGFG D + VP L +D V+ ++ GG
Sbjct: 259 AAGGWHSTALTDEGEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGEDIVQ-VSCGGT 317
Query: 104 HSIALT 109
HS+ALT
Sbjct: 318 HSVALT 323
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSI 106
+ G FH+ L +G LW WG + G+LG G P L D IA GG HS
Sbjct: 207 AVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSDLTLVDIAAGGWHST 266
Query: 107 ALT 109
ALT
Sbjct: 267 ALT 269
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 39 SVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY----LDD 93
S+S + +CGL+H+ + G+++ +GK D G+LG GH VPTL D+
Sbjct: 659 SLSSQVITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDE 718
Query: 94 HVRCIALGGVHSIALT 109
+ ++ G H++ ++
Sbjct: 719 KIVAVSCGYYHTVTIS 734
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHED----AAFVPTLNPYLDDHVRCIALGGV 103
SCG +H+ + GKL WG+ D G+LG G +D A +VP P L ++ + G
Sbjct: 724 SCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPL--P-LSSKIKTASCGCY 780
Query: 104 HSIALTSLAVEECNRCLILGEEEKRRL 130
H++ L S R ++ G K +L
Sbjct: 781 HTLILMS-----NGRVMVFGRNNKGQL 802
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 26 SENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE----- 79
S++ N Q L +S + ++SCG +H+ +++ NG++ ++G+ + G+LG G
Sbjct: 754 SKDHKNSAQYVPLPLSSKI-KTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGSRTLPSA 812
Query: 80 DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEEC 116
D N +D V IA G S LT + E C
Sbjct: 813 DLPLPVPSNSLANDEVVRIAAGFYSSYILTGRSGEGC 849
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 39 SVSKRFSNSSSCGLFHSGLVV--NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVR 96
S+ +++ +++ +H VV NG+L ++G D G+LG H P L L V
Sbjct: 606 SLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDSLSSQVI 665
Query: 97 C-IALGGVHSIALTS 110
+A G H+IA+TS
Sbjct: 666 TEVACGLYHTIAITS 680
>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
Length = 963
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 20 VVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH 78
V R+F S ++P + NLS S+ G HS L ++G ++ WG+ D G+LG GH
Sbjct: 186 VGRIFASTSTPEI--VENLSGVPLVQISA--GEAHSMALSMSGNVYSWGRNDCGQLGLGH 241
Query: 79 EDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
P+ LDD V +A GG H+ LT
Sbjct: 242 TYNKESPSCIEALDDQKVEFLACGGCHTALLT 273
>gi|442324509|ref|YP_007364530.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441492151|gb|AGC48846.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 586
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 48 SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAF--VPTLNPYLDDHVRCIALGGVHS 105
S+ G HSG + +G+++ WG+ G+LG G AA+ VP L P L+ V IA S
Sbjct: 221 STAGGLHSGALRDGRVYAWGRNTRGQLGLGAGSAAYSNVPQLVPGLEG-VVSIAFNQSFS 279
Query: 106 IALTS 110
+AL +
Sbjct: 280 MALDA 284
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Takifugu rubripes]
Length = 3883
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S+S G HS V +G+L+ WG+GD GRLG + +PTL + V +A G H+
Sbjct: 524 SASAGYRHSAAVTKDGELYTWGEGDFGRLGHSDSQSRNMPTLVKDISG-VGQVACGSSHT 582
Query: 106 IAL 108
IA+
Sbjct: 583 IAV 585
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 49 SCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHS 105
+CG H+ + +G+ +W +G GD G+LG G + + P + L +R + G S
Sbjct: 576 ACGSSHTIAVAQDGRTVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFIIRKVCAGSQSS 635
Query: 106 IALTSLA---VEECNRCLILGEEEKRRLK 131
+ALTS C CL G E L+
Sbjct: 636 LALTSAGQVFAWGCGSCLGCGSSETTSLR 664
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VHS 105
CG +S + +G L+ WG+G RLG G+ D +PT+ L +H + +ALG HS
Sbjct: 678 CGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHS 737
Query: 106 IALTS 110
+ LTS
Sbjct: 738 LCLTS 742
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R +A G HS
Sbjct: 3188 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSA 3247
Query: 107 ALTS 110
A++S
Sbjct: 3248 AISS 3251
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 3/89 (3%)
Query: 22 RLFNSENSPNWNQLANLSVSKRFSNSSSC-GLFHSGLVVNGKLWIWGKGDGGRLGFGHED 80
R+F E P L ++ S +S C G + +N + WG G+ RLG G
Sbjct: 601 RMFKPETEPQL--LEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTH 658
Query: 81 AAFVPTLNPYLDDHVRCIALGGVHSIALT 109
A VPT LD V+ + G +S A+T
Sbjct: 659 ARAVPTKITLLDRCVKAVFCGCSYSAAIT 687
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L G+++ WG+G+ G+LG G+ + P L +L+ +V IA G HS A+T+
Sbjct: 4337 ALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITA 4392
Score = 35.4 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 3347 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLA 3406
Query: 108 LT 109
+T
Sbjct: 3407 VT 3408
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
stuttgartiensis]
Length = 1413
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 13/92 (14%)
Query: 31 NWN-QLANLSVSKRFSNSSSCGL----------FHS-GLVVNGKLWIWGKGDGGRLGFGH 78
NWN QL + S + R + GL +H+ L +G +W WG +GG+LG G
Sbjct: 170 NWNGQLGDESTTNRSTPVQVSGLTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGS 229
Query: 79 EDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
P L D V IA G H+IAL S
Sbjct: 230 TTDRSTPVQVSGLTD-VIAIAGGYAHTIALKS 260
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
G H+ L +G +W WG +GGRLG G +P L D V IA G H+IAL
Sbjct: 251 GYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSD-VIAIAGGNAHTIALK 309
Query: 110 S 110
S
Sbjct: 310 S 310
>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
Length = 1078
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F SCG H ++ + +L+ WG+G GRLG G D PTL L D HV+ I+ G
Sbjct: 535 FVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTLVEALKDRHVKNISCG 594
Query: 102 GV 103
Sbjct: 595 ST 596
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CG ++ V +G+L+ WG G+ GRLG G P+ L V+ + G VHS
Sbjct: 329 ACGFAYTAAVTASGELYTWGAGENGRLGLGDVADRHTPSRVEGLHSKVKEVYAGSVHSCV 388
Query: 108 LT 109
LT
Sbjct: 389 LT 390
>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
Length = 958
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 20 VVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH 78
V R+F S ++P + NLS S+ G HS L ++G ++ WG+ D G+LG GH
Sbjct: 181 VGRIFASTSTPEI--VENLSGVPLVQISA--GEAHSMALSMSGNVYSWGRNDCGQLGLGH 236
Query: 79 EDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
P+ LDD V +A GG H+ LT
Sbjct: 237 TYNKESPSCIEALDDQKVEFLACGGCHTALLT 268
>gi|15088545|gb|AAK84081.1|AF326781_2 putative chromosome condensation factor [Triticum monococcum]
Length = 907
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ H+ LV NG+++ WG+ GGRLG G + + P L L ++ +A G H+ A
Sbjct: 84 CGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ +V GKL+ WG GD RLG G ++A PT L D+
Sbjct: 242 ACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDF 301
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 302 YRVACGHSLTVGLTT 316
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + VPT L D VR IA G +
Sbjct: 356 ACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTA 415
Query: 107 AL 108
A+
Sbjct: 416 AI 417
>gi|58533120|gb|AAW78916.1| putative chromosome condensation factor [Triticum aestivum]
Length = 907
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ H+ LV NG+++ WG+ GGRLG G + + P L L ++ +A G H+ A
Sbjct: 84 CGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ +V GKL+ WG GD RLG G ++A PT L D+
Sbjct: 242 ACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDF 301
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 302 YRVACGHSLTVGLTT 316
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + VPT L D VR IA G +
Sbjct: 356 ACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTA 415
Query: 107 AL 108
A+
Sbjct: 416 AI 417
>gi|196007790|ref|XP_002113761.1| hypothetical protein TRIADDRAFT_57518 [Trichoplax adhaerens]
gi|190584165|gb|EDV24235.1| hypothetical protein TRIADDRAFT_57518 [Trichoplax adhaerens]
Length = 507
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH--- 94
SV + SCG H + N GKL+ WG G G LG G+ PTL L D
Sbjct: 266 SVKDAIFTNISCGRDHRAAITNQGKLYTWGYGGLGCLGHGNSKTCLEPTLVEALADKVVI 325
Query: 95 -VRCIALGGVHSIALTS 110
V C + H++A+TS
Sbjct: 326 DVACGSANQNHTVAVTS 342
>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
Length = 963
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 20 VVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH 78
V R+F S ++P + NLS S+ G HS L ++G ++ WG+ D G+LG GH
Sbjct: 186 VGRIFASTSTPEI--VENLSGVPLVQISA--GEAHSMALSMSGNVYSWGRNDCGQLGLGH 241
Query: 79 EDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
P+ LDD V +A GG H+ LT
Sbjct: 242 TYNKDSPSCIEALDDQKVEFLACGGSHTALLT 273
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 38 LSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+S R + CG +S + +G L+ WG+G GRLG G+ D VP + L ++ +
Sbjct: 661 ISALDRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEI 720
Query: 96 RCIALGG--VHSIALTS 110
+ALG HS+ LTS
Sbjct: 721 IDVALGSGDAHSLCLTS 737
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L G+++ WG+G+ G+LG G+ + P L +L+ V IA G HS A+TS
Sbjct: 4247 ALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITS 4302
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R +A G HS
Sbjct: 3120 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSA 3179
Query: 107 ALTS 110
A++S
Sbjct: 3180 AISS 3183
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 3279 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 3338
Query: 108 LT 109
+T
Sbjct: 3339 VT 3340
>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 393
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED--AAFVPT-LNPYLDDHVRCIALGGVH 104
+ G +HS L +G+++ WG+G+ GRLGFG D + VP +N + + ++ GG H
Sbjct: 255 AAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGGTH 314
Query: 105 SIALTS 110
S+ALT
Sbjct: 315 SVALTQ 320
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHE----DAAFVPTLNPY---------LDDH 94
SCG HS L +G+++ +G+GD GRLG+G + VPT P + H
Sbjct: 309 SCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGH 368
Query: 95 --VRCIALGGVHSIALTSLAVEE 115
+ +A GG H++A+ V+E
Sbjct: 369 WIAKLVACGGRHTLAIVEWKVDE 391
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
S G HS L ++G ++ WG+ D G+LG GH P+ LDD V +A GG H+
Sbjct: 181 SAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTA 240
Query: 107 ALT 109
LT
Sbjct: 241 LLT 243
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G++HS L +G +W WG G+LG G P P L D V ++ GG HS+A
Sbjct: 152 SSGIYHSLALRTDGTVWAWGDNASGQLGDGTATRRLSPVQVPGLTD-VVALSAGGYHSLA 210
Query: 108 LTS 110
+ +
Sbjct: 211 VRT 213
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G +HS V +G +W WG G+LG G P P L D V ++ G HS+A
Sbjct: 502 SAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQVPGLTD-VVALSAGDSHSLA 560
Query: 108 LTS 110
L +
Sbjct: 561 LRT 563
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS L +G +W WG +LG G P P L D V ++ GG HS+A
Sbjct: 552 SAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGLTD-VVALSAGGAHSLA 610
Query: 108 LTS 110
L +
Sbjct: 611 LRT 613
>gi|330796442|ref|XP_003286276.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
gi|325083781|gb|EGC37225.1| hypothetical protein DICPUDRAFT_17436 [Dictyostelium purpureum]
Length = 423
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
G ++ WG G+GG LGFG +VPT L + ++ IA G H++ALT+
Sbjct: 321 GDVYSWGWGEGGTLGFGDNQNVYVPTQVKSLSN-IKKIAAGFKHTLALTN 369
>gi|328874090|gb|EGG22456.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 464
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 40/69 (57%), Gaps = 5/69 (7%)
Query: 47 SSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDA-AFVPTLNPYLDDH---VRCIALG 101
S SCG HS L + K+++ G G GRLG G+ +VPTL P+ ++ V ++ G
Sbjct: 342 SISCGATHSMFLSESNKVYVCGWGAEGRLGLGNNTINRYVPTLIPFFAENRIKVDQVSCG 401
Query: 102 GVHSIALTS 110
G HS+ LT+
Sbjct: 402 GAHSLLLTT 410
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
SCG HS L+ +G+++ WG G+ G+LG G E+ + P L + ++
Sbjct: 399 SCGGAHSLLLTTDGRVYSWGCGEDGKLGHGDEELSNDPKLIQFFEN 444
>gi|195113505|ref|XP_002001308.1| GI22045 [Drosophila mojavensis]
gi|193917902|gb|EDW16769.1| GI22045 [Drosophila mojavensis]
Length = 1966
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIAL 108
G +H+ V +GKL++WG G G+LG G + PTL + + I+LG HS+ L
Sbjct: 1241 GQYHNAAVADGKLYMWGWGIYGQLGNGSCENVPTPTLVSFFKYKKILQISLGHAHSLVL 1299
>gi|443693343|gb|ELT94735.1| hypothetical protein CAPTEDRAFT_226039 [Capitella teleta]
Length = 1483
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 23 LFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHE--- 79
LF SEN ++A + R N +CG H LV +G+ + WGK G LG H
Sbjct: 719 LFKSENDKLLPKVAEQELVYR-PNLLACGQHHVILVKDGQCFSWGKASSGALGRDHRLKE 777
Query: 80 -DAAFVPTLN-PYLDDHVRCIALGGVHSIALTSLAV 113
D + P L V+ ++ G H +ALT+ V
Sbjct: 778 SDNQILKIYGFPSLRTKVKSLSCGAHHCLALTTKGV 813
>gi|357506539|ref|XP_003623558.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
gi|355498573|gb|AES79776.1| Chromosome condensation regulator-like protein [Medicago
truncatula]
Length = 1108
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 44 FSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F SCG H + L +L+ WGKG GRLG G D PTL L + HV+ I+ G
Sbjct: 538 FVEEISCGAHHVAALTSRSELYTWGKGANGRLGHGDIDDRKSPTLVEALKERHVKNISCG 597
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ +V + KL+ WG GD RLG G+++ PT ++ ++ +
Sbjct: 429 ACGVWHTAAIVEVTFQSGSNVSSRKLFTWGDGDKYRLGHGNKETYLQPTCVSTLIEYNFH 488
Query: 97 CIALGGVHSIALTS 110
IA G +IALT+
Sbjct: 489 QIACGHTMTIALTT 502
>gi|301120392|ref|XP_002907923.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262102954|gb|EEY61006.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 255
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 36 ANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
+N ++S R + S F L GKL WGKG G+LG G D A+ P + P+
Sbjct: 127 SNSNISLRTAQVSCGWHFVLCLTDTGKLVTWGKGSHGQLGLGGFDNAYEPQVVPFPHT-A 185
Query: 96 RCIALGGVHSIALTS 110
R +A G HS+ +T+
Sbjct: 186 RHVACGSEHSMVVTT 200
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG HS +V V+GKL+ +G GD GRLG G+ P L+ H + +A G H++
Sbjct: 631 ACGFKHSAVVTVDGKLFTFGNGDYGRLGHGNSANKKTPERVTALEKHAIGQVACGLNHTL 690
Query: 107 ALTS 110
L++
Sbjct: 691 VLSA 694
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTS 110
L G++W WG G+LG GH +A P + P L ++R I+ G HS A T+
Sbjct: 796 ALTSTGEVWGWGNNVDGQLGLGHSNAQREPCVIPDLKGKNIRQISAGRNHSAAWTA 851
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG+ H+ LV NG+++ WG+ GGRLG G + + P L L ++ +A G H+ A
Sbjct: 84 CGVRHASLVTRNGEVFTWGEDSGGRLGHGTREDSVHPRLVESLAACNIDFVACGEFHTCA 143
Query: 108 LTS 110
+T+
Sbjct: 144 VTT 146
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-V 95
+CG++H+ +V GKL+ WG GD RLG G ++A PT L D+
Sbjct: 242 ACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLIDYDF 301
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 302 YRVACGHSLTVGLTT 316
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + VPT L D VR IA G +
Sbjct: 356 ACGSYHVAVLTSRSEVFTWGKGANGRLGHGDIEDRKVPTTVEALRDRAVRHIACGANFTA 415
Query: 107 AL 108
A+
Sbjct: 416 AI 417
>gi|384245633|gb|EIE19126.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 1375
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHS 105
+ GL H+ LV +G+++ WG G GG+LG GH A P ++ +R I G V S
Sbjct: 292 AVGLRHAALVTRSGEVYTWGNGAGGKLGLGHATDACAPQRVDTLWGQRIRSIVAGAVVS 350
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSI 106
SCG +HS L G L+ WG G G+LG G D+ P ++ D V +A G H+
Sbjct: 393 SCGPYHSAALSSTGALFTWGDGLCGKLGHGCLDSCLEPRQVDALKDKRVLHVACGVWHTA 452
Query: 107 ALTS 110
A+ +
Sbjct: 453 AIAA 456
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 63 LWIWGKGDGGRLGFG-HEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
++ WG+G G+LG G H D+A ++ HV +A GG H++A+
Sbjct: 635 IFTWGRGREGQLGVGMHADSAIPAPVDELRGRHVLQVACGGCHTLAV 681
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG F L +G+++ WGKGD RLG G E+ P L L + V + G H +
Sbjct: 664 SCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVVAGSTHCL 723
Query: 107 ALT 109
ALT
Sbjct: 724 ALT 726
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D + ++ G S+ALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCGSQFSVALT 674
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 3057 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3116
Query: 107 ALTS 110
A+TS
Sbjct: 3117 AITS 3120
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH----EDAAFVPTLN-PYLDDHVRCIALG 101
+ S G + L G+++ WG GDGGRLG G E+ + L+ HV IA G
Sbjct: 501 AHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACG 560
Query: 102 GVHSIALTS 110
+S A+T+
Sbjct: 561 STYSAAITA 569
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 10/66 (15%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-----IALGGV 103
CG F L +G +W WGKGD RLG G + V P + + +R +A+G +
Sbjct: 3216 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTD----VHVRKPQVVEGLRGKKIIHVAVGAL 3271
Query: 104 HSIALT 109
H +A+T
Sbjct: 3272 HCLAVT 3277
>gi|302417714|ref|XP_003006688.1| regulator of chromosome condensation [Verticillium albo-atrum
VaMs.102]
gi|261354290|gb|EEY16718.1| regulator of chromosome condensation [Verticillium albo-atrum
VaMs.102]
Length = 533
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 7/53 (13%)
Query: 65 IWGKGDGGRLGFG-HEDAAFVPTLNPYLDD------HVRCIALGGVHSIALTS 110
I+G GD G LG G ++ + P NP+L+ HV IA GG+H++ALT+
Sbjct: 110 IFGNGDNGELGLGPNKTESLRPRKNPFLNPVDSSKFHVVQIACGGMHTVALTA 162
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 26/51 (50%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
+G +W WG D GRLG G + P L V IA GG H+ ALTS
Sbjct: 71 SGGVWCWGGNDFGRLGDGSYTDSSTPVAVSGLPSGVTAIAAGGAHTCALTS 121
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +H+ L +G +W WG+ + G+LG G P L V IA GGVH+ A
Sbjct: 467 AAGGWHTCALTGSGGVWCWGRNNSGQLGDGSTIYHITPVAVSGLPSGVTAIAAGGVHTCA 526
Query: 108 LT 109
LT
Sbjct: 527 LT 528
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEEC 116
+G++W WG + G+LG G + P L V IA GGVH+ ALT C
Sbjct: 224 SGEVWCWGGNNYGQLGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCALTGSGGVRC 280
>gi|145508381|ref|XP_001440140.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407346|emb|CAK72743.1| unnamed protein product [Paramecium tetraurelia]
Length = 887
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 46 NSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH--EDAAFVPTLNPYLDDHVRCIALGGV 103
++ +CG +H+ + NG ++ WG+G G+LG E AA L+ + + ++ IA G
Sbjct: 136 DTIACGEYHTLALSNGDIFAWGRGFEGQLGIRKDVETAASPMFLSYFYKNRIQLIACGAY 195
Query: 104 HSIAL 108
HS+A+
Sbjct: 196 HSLAV 200
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu
rubripes]
Length = 4822
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G ++ P L L V +A+G H +A
Sbjct: 650 CGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLA 709
Query: 108 LT 109
LT
Sbjct: 710 LT 711
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D + + G S+ALT
Sbjct: 609 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALT 659
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 3039 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3098
Query: 107 ALTS 110
A+TS
Sbjct: 3099 AITS 3102
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 9/66 (13%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFV--PTLNPYLD-----DHVRCIALGGV 103
G + L NG+++ WG GDGGRL GH DA ++ PT+ + HV IA G
Sbjct: 490 GQHYLALSSNGEVFSWGCGDGGRL--GHGDATYLEEPTMIAAFNGKQAGKHVVHIACGST 547
Query: 104 HSIALT 109
+S +T
Sbjct: 548 YSAVIT 553
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG +S ++ ++G+L+ WG+G+ GRLG G + P L
Sbjct: 543 ACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPML 582
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3198 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLA 3257
Query: 108 LT 109
+T
Sbjct: 3258 VT 3259
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 7/79 (8%)
Query: 33 NQLANLSVSKRFSNSSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPY 90
+ L L V+K CG F L +G ++ WGKGD RLG G +D P +
Sbjct: 4180 DSLTGLGVTK-----VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL 4234
Query: 91 LDDHVRCIALGGVHSIALT 109
V IA G +H + T
Sbjct: 4235 QGKKVIAIATGSLHCVCCT 4253
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G ++ P L L V +A+G H +A
Sbjct: 627 CGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQGKKVVDVAVGSTHCLA 686
Query: 108 LT 109
LT
Sbjct: 687 LT 688
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D + + G S+ALT
Sbjct: 586 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALT 636
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-----DHVRCIALGGVHS 105
G + L NG+++ WG GDGGRLG G PT+ + HV IA G +S
Sbjct: 467 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHVVHIACGSTYS 526
Query: 106 IALT 109
A+T
Sbjct: 527 AAIT 530
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 2824 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSA 2883
Query: 107 ALTS 110
A+TS
Sbjct: 2884 AITS 2887
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG + + + V+G+L+ WG+G+ GRLG G + P L
Sbjct: 520 ACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPML 559
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2983 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLA 3042
Query: 108 LT 109
+T
Sbjct: 3043 VT 3044
>gi|345292915|gb|AEN82949.1| AT5G12350-like protein, partial [Capsella grandiflora]
Length = 169
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHS 105
+CG + S V ++G L+ WGKGD G LG G+E + +VP +L + HV IA G H+
Sbjct: 37 ACGEYXSCAVSLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHT 96
Query: 106 IALTS 110
+TS
Sbjct: 97 AVVTS 101
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL--DDHVRCIALGGVHS 105
+ G +HS L ++G+++ WG+G+ GRLGFG + ++ + L L + + ++ GG HS
Sbjct: 258 AAGGWHSTALTIDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVELLAGEDIVQVSCGGTHS 317
Query: 106 IAL 108
+AL
Sbjct: 318 VAL 320
>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 1106
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ +V + KL+ WG GD RLG G+++ +PT ++ +D +
Sbjct: 435 ACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFN 494
Query: 97 CIALGGVHSIALTS 110
IA G ++ALT+
Sbjct: 495 QIACGHTFTVALTT 508
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALG 101
F SCG H ++ + +++ WGKG GRLG G +D PTL L + HV+ I+ G
Sbjct: 544 FVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCG 603
>gi|449481389|ref|XP_004156168.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
SCG +HS + NG+++ WG G G+LG D +P LD V+ IA GGV
Sbjct: 232 SCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGV 291
Query: 104 HSIALT 109
H+ A+T
Sbjct: 292 HTCAIT 297
>gi|449447434|ref|XP_004141473.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
SCG +HS + NG+++ WG G G+LG D +P LD V+ IA GGV
Sbjct: 232 SCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGV 291
Query: 104 HSIALT 109
H+ A+T
Sbjct: 292 HTCAIT 297
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSI 106
+CG HS GL +G +++WG+ G+LG + PT L P ++ + G H+
Sbjct: 248 ACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTA 307
Query: 107 ALTS 110
ALT+
Sbjct: 308 ALTA 311
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
S G HS L ++G ++ WGK + G+LG H ++ P+L LD+ V +A GG H+
Sbjct: 197 SAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTA 256
Query: 107 ALTS 110
LT
Sbjct: 257 LLTQ 260
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ I L G
Sbjct: 144 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLSGIPLAQISAGE 200
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 201 AHSMALS 207
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL--D 92
L+NLS + ++ G + L G+++ WG+G+ GRLGFG + ++ + L L
Sbjct: 249 LSNLS----LVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLAG 304
Query: 93 DHVRCIALGGVHSIALTS 110
+ + ++ GG HS+ LTS
Sbjct: 305 EDIVQVSCGGTHSVVLTS 322
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 23 LFNSENSPNWNQLANLS--VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHED 80
L ++ N P Q+ LS V K+ + S G L ++GK++ WG+G+ G+LG G+
Sbjct: 3308 LGHNNNVPTPKQVPILSQYVVKKVAVHSG-GKHAMALTLDGKVFSWGEGEDGKLGHGNRL 3366
Query: 81 AAFVPTLNPYL-DDHVRCIALGGVHSIALTS 110
P L L +R IA G HS A+TS
Sbjct: 3367 TLEKPKLIETLRTKRIRDIACGSSHSAAITS 3397
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L +G++W WGKGD RLG G + PT + V +A+G +H +A
Sbjct: 3493 CGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLA 3552
Query: 108 LT 109
+T
Sbjct: 3553 VT 3554
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL--GGVHSIALT 109
+GKL+ G+G GRLG GH + P P L + V+ +A+ GG H++ALT
Sbjct: 3292 DGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALT 3344
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 9/83 (10%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD- 93
LA V+ F SS + + + G+L+ WG+G GRLG G+ + +PT+ L
Sbjct: 679 LAERQVTGVFCGSS----YSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQ 734
Query: 94 ---HVRCIALGGVHSIALTSLAV 113
HV + G HS+ +T +
Sbjct: 735 RVIHV-ALGCGDAHSLCVTDTGI 756
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G+L+ WG G+ GRLG G P L L DH
Sbjct: 3386 ACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTALADH 3432
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 35 LANLSVSKRFSNSSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD- 92
LA L V+K CG F L +G ++ WGKGD RLG G+ D P L
Sbjct: 4619 LAGLGVTK-----VECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQG 4673
Query: 93 DHVRCIALGGVHSIALT 109
+ IA G +H +A +
Sbjct: 4674 KKIISIATGSLHCVACS 4690
Score = 35.0 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L +G+++ WG+G+ G+LG G+ D+ P L L V IA G HS +TS
Sbjct: 4478 ALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIEALSGIGVIDIACGSAHSACITS 4533
Score = 35.0 bits (79), Expect = 10.0, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIALTS 110
L G ++ WG G+GGRLG G + +PT + + V + G +S A+T+
Sbjct: 644 ALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSAAITA 699
>gi|224079652|ref|XP_002305904.1| predicted protein [Populus trichocarpa]
gi|222848868|gb|EEE86415.1| predicted protein [Populus trichocarpa]
Length = 1078
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRC 97
+ + F S G +H + L G ++ WGKG G+LG G+ + VPTL L D V+
Sbjct: 576 LKEEFVKEISSGSYHVAALTSGGSVYTWGKGTNGQLGLGNVEDRNVPTLVEALRDRQVQS 635
Query: 98 IALGGVHSIAL---TSLAVEECNRC 119
IA G + A+ S++V + + C
Sbjct: 636 IACGSNLTAAICLHKSISVSDQSAC 660
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 13/77 (16%)
Query: 46 NSSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
S +CG +H+ +V+ GKL+ WG GD GRLG + PT L +
Sbjct: 467 KSVACGSWHTAAIVDVIFDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLQPTCVAQLVE 526
Query: 94 H-VRCIALGGVHSIALT 109
H ++ G + ++ALT
Sbjct: 527 HDFVQVSCGRMLTVALT 543
>gi|159477761|ref|XP_001696977.1| hypothetical protein CHLREDRAFT_119993 [Chlamydomonas reinhardtii]
gi|158274889|gb|EDP00669.1| predicted protein [Chlamydomonas reinhardtii]
Length = 179
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNP---YLDDHVRCIALGG 102
S+S G+ HS L +G L+ WG G G+LG + + L+P D V IA G
Sbjct: 55 SASAGVTHSMALAADGSLFTWGNGQHGQLGHKSLEGTGIAELDPAPLTPDARVTAIAAGA 114
Query: 103 VHSIALT 109
HS+ALT
Sbjct: 115 YHSMALT 121
>gi|410898904|ref|XP_003962937.1| PREDICTED: protein RCC2 homolog [Takifugu rubripes]
Length = 494
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHS 105
S C + GKLW WG+ + G+LG G P L L DH V A G H+
Sbjct: 127 SGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEGLADHLVVAAACGRNHT 186
Query: 106 IALT 109
+ALT
Sbjct: 187 LALT 190
>gi|255571261|ref|XP_002526580.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223534074|gb|EEF35792.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1086
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 15/78 (19%)
Query: 47 SSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
S +CG +H+ +V+ GKL+ WG GD GRLG + VPT L D+
Sbjct: 473 SVACGSWHTAAIVDIIADRFKFNAVGGKLFTWGDGDKGRLGHSDMEKKLVPTCVAKLVDY 532
Query: 95 --VRCIALGGVHSIALTS 110
+R ++ G + ++ALT+
Sbjct: 533 DFIR-VSCGRMLTVALTN 549
>gi|170072879|ref|XP_001870278.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869335|gb|EDS32718.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1203
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 50 CGLFHSGLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
CGL HSG + +G L++WG G LGFG F P L + V I+ G H++AL
Sbjct: 1091 CGLTHSGAITDGDDLYMWGHNRHGCLGFGDRKDQFFP-LKVAVSARVMKISCGVDHTLAL 1149
>gi|170045507|ref|XP_001850348.1| williams-Beuren syndrome chromosome region 16 protein [Culex
quinquefasciatus]
gi|167868522|gb|EDS31905.1| williams-Beuren syndrome chromosome region 16 protein [Culex
quinquefasciatus]
Length = 452
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 50 CGLFHSGLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
CGL HSG + +G L++WG G LGFG F P L + V I+ G H++AL
Sbjct: 389 CGLTHSGAITDGDDLYMWGHNRHGCLGFGDRKDQFFP-LKVAVSARVMKISCGVDHTLAL 447
>gi|15238303|ref|NP_199029.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|9757959|dbj|BAB08447.1| TMV resistance protein-like [Arabidopsis thaliana]
gi|332007389|gb|AED94772.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1073
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Query: 49 SCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV- 95
+CG++H+ +V GKL+ WG GD RLG G ++ PT L DH
Sbjct: 437 ACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTF 496
Query: 96 RCIALGGVHSIALTS 110
+A G ++ LT+
Sbjct: 497 HRVACGHSLTVGLTT 511
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG +H ++ + +++ WGKG GRLG G + PTL L + HV+ IA G +
Sbjct: 552 ACGAYHVAVLTSRNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTA 611
Query: 107 AL 108
A+
Sbjct: 612 AI 613
Score = 36.2 bits (82), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+CG+ H+ LV G+++ WG+ GGRLG G P L L + +A G H+
Sbjct: 278 ACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHTC 337
Query: 107 ALT 109
A+T
Sbjct: 338 AVT 340
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis
niloticus]
Length = 4833
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G ++ P L L V +A+G H +A
Sbjct: 655 CGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVAVGSTHCLA 714
Query: 108 LT 109
LT
Sbjct: 715 LT 716
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D + + G S+ALT
Sbjct: 614 NGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALT 664
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGH----EDAAFVPTLN-PYLDDHVRCIALGGVHS 105
G + L NG+++ WG GDGGRLG G E+ + T N HV +A G +S
Sbjct: 495 GQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHVVHVACGSTYS 554
Query: 106 IALTS 110
A+T+
Sbjct: 555 AAITA 559
Score = 38.5 bits (88), Expect = 0.95, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 3050 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3109
Query: 107 ALTS 110
A+TS
Sbjct: 3110 AITS 3113
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3209 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLA 3268
Query: 108 LT 109
+T
Sbjct: 3269 VT 3270
>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
Length = 1075
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG+ H LV G+++ WG+ GGRLG G + P L +L HV +A G H+
Sbjct: 272 ACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTC 331
Query: 107 ALTS 110
A+TS
Sbjct: 332 AITS 335
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F SCG +H+ ++ + +++ WG+G GRLG G + PTL L D HV+ I+ G
Sbjct: 540 FVEEISCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCG 599
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ +V + KL+ WG GD RLG G+++ +PT ++ +D +
Sbjct: 431 ACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH 490
Query: 97 CIALGGVHSIALTS 110
+A G ++ALT+
Sbjct: 491 QLACGHNMTVALTT 504
>gi|224135109|ref|XP_002327568.1| predicted protein [Populus trichocarpa]
gi|222836122|gb|EEE74543.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 5/85 (5%)
Query: 40 VSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRC 97
+ + F S G +H + L +G L+ WGKG G+LG G+ + PTL L D V+
Sbjct: 576 LKEEFVKEISSGSYHVAALTSSGSLYTWGKGTNGQLGLGNVEDRNFPTLVEALRDMQVQS 635
Query: 98 IALGGVHSIAL---TSLAVEECNRC 119
IA G + A+ S++V + + C
Sbjct: 636 IACGSNLTAAICLHKSISVSDQSAC 660
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 19/80 (23%)
Query: 46 NSSSCGLFHSGLVVN------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD- 92
S +CG +H+ +V+ GKL+ WG GD GRLG + +PT L
Sbjct: 467 KSVACGSWHTAAIVDIIVDRFKFNGVGGKLFTWGDGDKGRLGHADLEKKLLPTCVAQLVE 526
Query: 93 ---DHVRCIALGGVHSIALT 109
D V C G + ++ALT
Sbjct: 527 LDFDQVSC---GRMLTVALT 543
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSI 106
+CG HS GL +G +++WG+ G+LG + PT L P ++ + G H+
Sbjct: 254 ACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTA 313
Query: 107 ALTS 110
ALT+
Sbjct: 314 ALTA 317
>gi|351707650|gb|EHB10569.1| X-linked retinitis pigmentosa GTPase regulator [Heterocephalus
glaber]
Length = 1209
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLV-VNGKLWIWGKGDG 71
RLF NSE N + N+ V + + +CG +HS V ++G+L+ +G+ +
Sbjct: 169 RLFVWGDNSEGQIGLNNIINVCVPHQVNIGKPISWVACGYYHSAFVTMDGELYTFGESES 228
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG E P L + + V +A GG H++ LT AV
Sbjct: 229 GKLGLPKELLINHRTPQLVAGIPEKVIQVACGGGHTVVLTEKAV 272
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG HS +V N KL+++G + G+LG G + PT L + V+ A G H++
Sbjct: 16 SCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSTVNKPTCVKALKPEKVQLAACGRNHTL 75
Query: 107 ALT 109
LT
Sbjct: 76 VLT 78
>gi|225434018|ref|XP_002272273.1| PREDICTED: uncharacterized protein LOC100254306 [Vitis vinifera]
Length = 647
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVV-------------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDD 93
S+CG++H+ VV +GK + WG D GR G G ++A VPT + +D
Sbjct: 27 SACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDP 86
Query: 94 HVRCIALGGVHSIALTS 110
+ IA G ++ALT+
Sbjct: 87 NFCRIACGHSLTVALTT 103
>gi|194227810|ref|XP_001917704.1| PREDICTED: LOW QUALITY PROTEIN: x-linked retinitis pigmentosa
GTPase regulator-like [Equus caballus]
Length = 915
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGF------GHEDAAFVPTLNPYLDDHVRCIALG 101
SCG +HS + G+L+ +G+ + G+LG H +P L P + + V +A G
Sbjct: 196 SCGYYHSAFITTEGELYTFGEPESGKLGLPSKLLINHR----IPQLVPGIPEKVIQVACG 251
Query: 102 GVHSIALTSLAV 113
G H++ LT AV
Sbjct: 252 GGHTVVLTENAV 263
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG H+ +V N KL+++G + G+LG G E PT L + V+ +A G H+I
Sbjct: 41 ACGDEHTAVVTGNNKLYMFGSNNWGQLGLGSESPVSKPTCIKALKPEKVKFVACGRTHTI 100
Query: 107 ALT 109
T
Sbjct: 101 VAT 103
>gi|428165513|gb|EKX34506.1| hypothetical protein GUITHDRAFT_80497 [Guillardia theta CCMP2712]
Length = 273
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CG HS L G++W WG G GRLG G E P L +A GG H++A
Sbjct: 110 ACGSAHSSCLAACGRIWTWGCGKYGRLGHGGEKNEPQPREVSSLPHRAFLVACGGSHTVA 169
>gi|367039539|ref|XP_003650150.1| hypothetical protein THITE_2038461 [Thielavia terrestris NRRL 8126]
gi|346997411|gb|AEO63814.1| hypothetical protein THITE_2038461 [Thielavia terrestris NRRL 8126]
Length = 496
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 35/66 (53%), Gaps = 12/66 (18%)
Query: 65 IWGKGDGGRLGFGHE-DAAFVPTLNPYL--DD----HVRCIALGGVHSIALTSLAVEECN 117
++G GD G LG G A P LNPYL DD V IA GG+H++ALT E N
Sbjct: 71 VFGNGDAGELGLGPAVQEAARPRLNPYLNPDDPSALRVVQIACGGMHTVALT-----EDN 125
Query: 118 RCLILG 123
R + G
Sbjct: 126 RIVTWG 131
>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
Length = 539
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG HS + NG+++ WG G G+LG G E++ +PTL +D V+ G H++
Sbjct: 444 ACGWDHSLAVTANGRVYTWGSGANGKLGHGDEESFDIPTLVRCMDGKKVKDAKAGCEHTV 503
Query: 107 ALT 109
LT
Sbjct: 504 FLT 506
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 10/68 (14%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT------LNPYLDDHVRCIALG 101
+CGL H+ L+ +G+L+ WG G GRLG G + PT + P H+ C G
Sbjct: 269 ACGLGHTLALIESGELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRHIFC---G 325
Query: 102 GVHSIALT 109
HS+ L+
Sbjct: 326 ASHSLGLS 333
>gi|91203943|emb|CAJ71596.1| similar to regulator of chromosome condensation [Candidatus
Kuenenia stuttgartiensis]
Length = 387
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCG H+ L +G +W WG D G+LG G +P P L++ V I+ GG HS+A
Sbjct: 143 SCGGQHNLALKSDGTVWAWGINDKGQLGIGDAKNQQIPIRIPGLNNIV-AISAGGYHSLA 201
Query: 108 LTS 110
+ S
Sbjct: 202 IKS 204
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 50 CGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY--LDDHVRCIALGGVHSI 106
CG +HS ++ +GK+ +WGK G+LG G + P +N Y L+ VR LG H
Sbjct: 1330 CGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANH-- 1387
Query: 107 ALTSLAVEECNRCLILG 123
+L V N+ +G
Sbjct: 1388 ---TLVVMVANKVFAMG 1401
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 50 CGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAA-FVPTLNPYLDDHVRCIALGGVHSIA 107
G FHS L G L++WGK G+LG G AA PT LD V ++LG HS
Sbjct: 1754 AGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLGANHSAV 1813
Query: 108 LTSLAVEECNRC 119
L + C
Sbjct: 1814 LMQVTSPNLFTC 1825
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 32 WNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY 90
+N L++ + F S +CG +H+ L ++ WG G+ G+LG H + P +
Sbjct: 1260 FNPQPVLNLKRYFILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKA 1319
Query: 91 LDDHVRC-IALGGVHSIAL 108
LD C I GG HS A+
Sbjct: 1320 LDGRAPCKILCGGWHSAAI 1338
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 55 SGLVVNGKLWIWGKGDGGRLGFGHED--AAFVPTLNPYLDDHVRC-IALGGVHSIALTSL 111
+ L GK++ WGK G+LG G A VP L L HV C I+LG H+ T +
Sbjct: 566 AALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDM 625
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-----------DDHVR 96
+CG H+ + G +W WGKG G+LG F P LN L DDH
Sbjct: 246 ACGAHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTL 305
Query: 97 CIALGG 102
I G
Sbjct: 306 VILRSG 311
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+ G +HS L GK++ WG G G+LG G + A P L + V IA G H+
Sbjct: 194 AAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTA 253
Query: 107 ALTSLA 112
A+T++
Sbjct: 254 AITTVG 259
>gi|302847903|ref|XP_002955485.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
nagariensis]
gi|300259327|gb|EFJ43556.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
nagariensis]
Length = 1660
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CG H+ +V + G L+ +G G+LG +D L L D V +A GG H++A
Sbjct: 47 ACGGAHTAVVTDDGALFTFGLNSWGQLGHSRQDKFVASPLEVGLPDPVVAVAAGGYHTLA 106
Query: 108 LTS 110
LTS
Sbjct: 107 LTS 109
>gi|428163598|gb|EKX32661.1| hypothetical protein GUITHDRAFT_148483 [Guillardia theta CCMP2712]
Length = 407
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
S GLFHS V GKL+ WGKG G+LG G +VP L ++ A G H+
Sbjct: 173 SAGLFHSAAVGEKGKLYTWGKGGEGQLGSGMMADLYVPAAVKDLKHKNITKAACGSFHTA 232
Query: 107 ALTS 110
ALT+
Sbjct: 233 ALTN 236
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVH 104
S CG H+ L +G++W WG G+ GRLG G D VP Y D+++ I+ G
Sbjct: 163 SVECGELHTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDF 222
Query: 105 SIALT 109
+ A+T
Sbjct: 223 TFAIT 227
>gi|307107146|gb|EFN55390.1| hypothetical protein CHLNCDRAFT_57991 [Chlorella variabilis]
Length = 596
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH-EDAAFVPTLNPYLDDHVRCIALGGVH 104
S SCG H+ + G+LW G+G G+LG GH D + ++ + V +A G H
Sbjct: 279 SVSCGANHTLAISETGQLWSCGRGRHGQLGHGHFHDEGLLMLVDTIRHERVVSVAAGRAH 338
Query: 105 SIALTS 110
S+AL +
Sbjct: 339 SVALAA 344
>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
sativus]
Length = 958
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG+ H LV G+++ WG+ GGRLG G + P L +L HV +A G H+
Sbjct: 134 ACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSRPHLVEFLAVSHVDFVACGEYHTC 193
Query: 107 ALTS 110
A+TS
Sbjct: 194 AITS 197
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
SCG +H+ ++ + +++ WG+G GRLG G + PTL L D HV+ I+ G
Sbjct: 407 SCGAYHTVVLTSRNEVFSWGRGSNGRLGHGDVEDRKAPTLIEALKDRHVKSISCG 461
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ +V + KL+ WG GD RLG G+++ +PT ++ +D +
Sbjct: 293 ACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH 352
Query: 97 CIALGGVHSIALTS 110
+A G ++ALT+
Sbjct: 353 QLACGHNMTVALTT 366
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 1359 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 1418
Query: 108 LTS 110
LTS
Sbjct: 1419 LTS 1421
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 1517 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 1576
Query: 108 LT 109
+T
Sbjct: 1577 VT 1578
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
CG +H+ L +G +W WGK + G+ G G +P L V+ IA+GG SIAL
Sbjct: 678 CGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQVSGLSG-VKAIAVGGNRSIAL 736
Query: 109 TS 110
S
Sbjct: 737 KS 738
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 24 FNSENSPNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAA 82
F S +P+ Q++NLS K S CG S L +G +W WG + G LG G
Sbjct: 462 FISNTTPS--QVSNLSGIK----SIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRV 515
Query: 83 FVPTLNPYLDDHVRCIALGGVHSIAL 108
PT + D ++ I++G H +AL
Sbjct: 516 IYPTETLNIGD-IKAISIGSSHCLAL 540
>gi|390348017|ref|XP_003726917.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like
[Strongylocentrotus purpuratus]
Length = 1514
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-----DDHVRCIALGGVHS 105
G + L + +++ WG G+GGRLG G+ A PTL L HV I+ G +S
Sbjct: 787 GKHYLALTADWEVYAWGNGEGGRLGLGNTSAREDPTLVQGLPSQSTGQHVIQISCGSSYS 846
Query: 106 IALTS 110
ALTS
Sbjct: 847 AALTS 851
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
SCG +S L NG+++ WG+G GRLG G+ D P L DD +
Sbjct: 840 SCGSSYSAALTSNGEVYTWGRGIYGRLGHGNSDDQLTPKLVSNSDDQL 887
>gi|168028029|ref|XP_001766531.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682176|gb|EDQ68596.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 10/68 (14%)
Query: 21 VRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNG--KLWIWGKGDGGRLGFGH 78
VR+F E+S N++ S +CG H+ V NG LW WG+G G LG GH
Sbjct: 382 VRVF-GESSAKCNRITG-------SKGIACGAAHTVTVSNGGRDLWAWGRGKNGVLGLGH 433
Query: 79 EDAAFVPT 86
++ P+
Sbjct: 434 HSDSWFPS 441
>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
of chromosome condensation (RCC1) domains and a PF|01363
FYVE Zinc finger domain [Arabidopsis thaliana]
gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1006
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 13/61 (21%)
Query: 47 SSSCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
S SCG +H+ +V GKL+ WG GD GRLG VPT L D
Sbjct: 451 SVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELID 510
Query: 94 H 94
H
Sbjct: 511 H 511
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 2279 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2338
Query: 108 LTS 110
LTS
Sbjct: 2339 LTS 2341
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2437 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2496
Query: 108 LT 109
+T
Sbjct: 2497 VT 2498
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 2330 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 2389
Query: 105 SIALT 109
++ALT
Sbjct: 2390 TLALT 2394
>gi|194745564|ref|XP_001955257.1| GF18668 [Drosophila ananassae]
gi|190628294|gb|EDV43818.1| GF18668 [Drosophila ananassae]
Length = 1989
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIAL- 108
G +H+ V +GKL++WG G G+LG G + P L + + I+LG H++ L
Sbjct: 1246 GQYHNAAVADGKLYMWGWGVYGQLGQGCCENIATPQLVSFFKYKKILQISLGHAHTLVLC 1305
Query: 109 -TSLAVEECNRC 119
S + +E N C
Sbjct: 1306 EASSSYKEANNC 1317
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G +HS L ++G +W WG G+LG G A VP L D V IA GG HS+A
Sbjct: 1178 STGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGLRD-VVAIAAGGYHSVA 1236
Query: 108 LTS 110
+ S
Sbjct: 1237 VRS 1239
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S + G FHS + +G +W WG+ G+LG G VP P L VR +A G HS
Sbjct: 421 SMATGSFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPS-VRAVAAAGHHS 479
Query: 106 IAL 108
IA+
Sbjct: 480 IAV 482
>gi|336116892|ref|YP_004571659.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
gi|334684671|dbj|BAK34256.1| hypothetical protein MLP_12420 [Microlunatus phosphovorus NM-1]
Length = 508
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 52 LFHSGLVVNGKLW---IWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
L SG VV LW +WG+ D G LG G F P+ PYLD V I GG S+A
Sbjct: 133 LLGSGEVVAPTLWQGWVWGQNDHGELGDGTNKRRFAPSPMPYLDQVGVSAIDGGGWFSLA 192
Query: 108 L 108
L
Sbjct: 193 L 193
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFG----HEDAAFVPTLNPYLDDHVRCIALGGVHS 105
G +HS L +G +W WG G G+LG G H AA VP L+ V+ ++ G HS
Sbjct: 290 GGWHSLALREDGTVWSWGHGHQGQLGDGTNSDHNAAAVVPGLS-----GVKAVSAGYRHS 344
Query: 106 IAL 108
+AL
Sbjct: 345 LAL 347
>gi|168024675|ref|XP_001764861.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683897|gb|EDQ70303.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 456
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 45 SNSSSCGLFHSGLVVNG--KLWIWGKGDGGRLGFGHEDAAFVPT 86
S +CG H+ V NG LW WG+G G LG GH ++ P+
Sbjct: 407 SKGIACGAAHTVTVSNGGKDLWTWGRGKNGVLGLGHNSDSWFPS 450
>gi|407927258|gb|EKG20156.1| Regulator of chromosome condensation RCC1 [Macrophomina phaseolina
MS6]
Length = 603
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGF----GHED-----AAFVPTLNPYLDDHVRCI 98
+CG +HS V GK+W WG + G G G +D AA VP L+ D ++ I
Sbjct: 403 ACGSYHSFAVEKTGKVWAWGLNNFGETGIPDNAGEDDAVILKAAPVPALS---DKKIKNI 459
Query: 99 ALGGVHSIALTSLAVEECNRCLILG 123
GG HS A+T E +CL+ G
Sbjct: 460 DGGGHHSAAVT-----EDGKCLVWG 479
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 2750 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2809
Query: 108 LTS 110
LTS
Sbjct: 2810 LTS 2812
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 432 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 487
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 488 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 523
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2908 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2967
Query: 108 LT 109
+T
Sbjct: 2968 VT 2969
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 2801 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 2860
Query: 105 SIALT 109
++ALT
Sbjct: 2861 TLALT 2865
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 2343 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 2402
Query: 108 LTS 110
LTS
Sbjct: 2403 LTS 2405
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2501 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2560
Query: 108 LT 109
+T
Sbjct: 2561 VT 2562
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 2394 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 2453
Query: 105 SIALT 109
++ALT
Sbjct: 2454 TLALT 2458
>gi|449481391|ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
SCG +HS + NG+++ WG G G+LG D +P LD V+ IA GGV
Sbjct: 232 SCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGV 291
Query: 104 HSIALT 109
H+ A+T
Sbjct: 292 HTCAIT 297
>gi|441617104|ref|XP_004088421.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nomascus
leucogenys]
Length = 300
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 34/69 (49%), Gaps = 12/69 (17%)
Query: 50 CGLFHSG-----LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIAL 100
CG++ G + NG++W WG GD G+LG G D P L L D VRC
Sbjct: 176 CGVWEWGCSNPAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC--- 232
Query: 101 GGVHSIALT 109
G SIALT
Sbjct: 233 GSQFSIALT 241
>gi|147803323|emb|CAN75476.1| hypothetical protein VITISV_017798 [Vitis vinifera]
Length = 230
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 14/77 (18%)
Query: 48 SSCGLFHSGLVV-------------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDD 93
S+CG++H+ VV +GK + WG D GR G G ++A VPT + +D
Sbjct: 53 SACGVWHTVAVVGIMVGNPSSSNCSSGKPFTWGDSDKGRFGHGDKEAKLVPTCVAAPIDP 112
Query: 94 HVRCIALGGVHSIALTS 110
+ IA G ++ALT+
Sbjct: 113 NFCRIACGHSLTVALTT 129
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 647 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 706
Query: 108 LTS 110
LTS
Sbjct: 707 LTS 709
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 805 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 864
Query: 108 LT 109
+T
Sbjct: 865 VT 866
Score = 35.0 bits (79), Expect = 9.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 698 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 757
Query: 105 SIALT 109
++ALT
Sbjct: 758 TLALT 762
>gi|449681031|ref|XP_002154536.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1132
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 28 NSPNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHEDAAFVP 85
NSP LS+ + +CG H+ L NGK L+ WG G+ G+LG G +P
Sbjct: 463 NSPQKTPQLILSLKNEHISQIACGKDHTLALANNGKKLYAWGDGEFGKLGLGSTSVRSIP 522
Query: 86 TL-NPYLDDHVRCIALGGVHSIALTS 110
L + Y + ++ IA G SI L +
Sbjct: 523 NLVDSYRNVCLKKIACGSKFSIVLAT 548
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 48 SSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHS 105
+SCG HS L +GK++ +G+G G LG G P L L ++H+ IA G H+
Sbjct: 431 ASCGFKHSAVLTKDGKVFTFGQGQYGILGDGGNSPQKTPQLILSLKNEHISQIACGKDHT 490
Query: 106 IALTS 110
+AL +
Sbjct: 491 LALAN 495
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 90 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 149
Query: 108 LTS 110
LTS
Sbjct: 150 LTS 152
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 248 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 307
Query: 108 LT 109
+T
Sbjct: 308 VT 309
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 141 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 200
Query: 105 SIALT 109
++ALT
Sbjct: 201 TLALT 205
>gi|449447436|ref|XP_004141474.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
SCG +HS + NG+++ WG G G+LG D +P LD V+ IA GGV
Sbjct: 232 SCGEYHSAAISENGEVYTWGLGSMGQLGHCSLQSADKELIPRRVVALDGICVKDIACGGV 291
Query: 104 HSIALT 109
H+ A+T
Sbjct: 292 HTCAIT 297
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVP----TLNPYLDDHVRCIALGGV 103
+CG HS +V V+GKL+ +G D GRLG G+ +P L P + V IA G
Sbjct: 3550 ACGHKHSAIVTVDGKLFTFGASDLGRLGLGNTSNKKLPAQVTALQPIM---VELIACGAN 3606
Query: 104 HSIALTS 110
H++ +T+
Sbjct: 3607 HTVVVTT 3613
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPT--LNPYLDDHVRCIALGGVHSIALTS 110
+G+++ WG GD G+LG G+ P L P VR IA+G HS A+TS
Sbjct: 487 DGRIYSWGDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITS 539
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+ G HS + + G L+ WG GD GRLG G + +PTL
Sbjct: 528 AVGYRHSAAITSEGLLYTWGDGDYGRLGHGDNHSRSIPTL 567
>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
thaliana]
Length = 1067
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+C ++H+ +V + KL+ WG GD RLG G+++ +PT ++ +D +
Sbjct: 425 ACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH 484
Query: 97 CIALGGVHSIALTS 110
IA G ++ALT+
Sbjct: 485 KIACGHTFTVALTT 498
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALG 101
F +CG H ++ + +++ WGKG GRLG G + PTL L D HV+ ++ G
Sbjct: 534 FVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCG 593
>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1045
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+C ++H+ +V + KL+ WG GD RLG G+++ +PT ++ +D +
Sbjct: 416 ACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH 475
Query: 97 CIALGGVHSIALTS 110
IA G ++ALT+
Sbjct: 476 KIACGHTFTVALTT 489
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALG 101
F +CG H ++ + +++ WGKG GRLG G + PTL L D HV+ ++ G
Sbjct: 525 FVEEIACGAHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCG 584
>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
Length = 1043
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 13/79 (16%)
Query: 47 SSSCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDD 93
S++CG +H+ +V +GKL+ WG GD GRLG + VPT + +D
Sbjct: 467 SAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGSKLVPTRVTQLVDY 526
Query: 94 HVRCIALGGVHSIALTSLA 112
++ G + ++ALT++
Sbjct: 527 DFVQVSCGRMLTVALTNMG 545
>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 529
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG HS + +GK++ WG G G+LG G E++ PTL ++ HV+ G H++
Sbjct: 433 ACGWDHSLAVSASGKVYTWGSGTNGKLGHGDEESFDTPTLVRTMEGRHVKDAKAGCEHTV 492
Query: 107 ALT 109
LT
Sbjct: 493 FLT 495
>gi|209875367|ref|XP_002139126.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209554732|gb|EEA04777.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 1864
Score = 40.0 bits (92), Expect = 0.27, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD--DHVRCIALGGVHSIALTS 110
+G LWIWG GD G+LG G + YL+ + ++LG VH++ALT+
Sbjct: 632 SGDLWIWGNGDFGKLGLGDDVNGKCIAAPRYLNLGYPIVKVSLGTVHTLALTA 684
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 50 CGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--IALGGVHSI 106
CG H+ L NG L+ WG G G LG G + F PT ++ ++ IA G HS+
Sbjct: 172 CGANHTLALSDNGHLYSWGVGQFGCLGTGSTEDVFFPTKIEISNNSLKVQHIAAGSRHSL 231
Query: 107 ALT 109
T
Sbjct: 232 CCT 234
>gi|323138357|ref|ZP_08073428.1| regulator of chromosome condensation RCC1 [Methylocystis sp. ATCC
49242]
gi|322396440|gb|EFX98970.1| regulator of chromosome condensation RCC1 [Methylocystis sp. ATCC
49242]
Length = 221
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 22 RLFNSENSPNWNQLANLSVSKRFSNS------SSCGLFHSGLVVNGKLWIWGKGDGGRLG 75
R+ N+ N P+ N A L + + S+ + L G + WG D G+LG
Sbjct: 66 RIVNTPNPPDCNGAAWLGYGRMVAAGAGQETLSATQHYTCALTTAGGVKCWGLNDSGQLG 125
Query: 76 FGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEEC---NRCLILGEEEKRRLK 131
G P L V ++ GG H+ ALTS +C NR + E++ RR +
Sbjct: 126 DGTTTTRLTPVNVSGLISVVVAVSSGGRHTCALTSTGGFKCWGGNRQGLESEKDPRRPQ 184
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 49 SCGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD 92
SCG F + + NG L++WG G+ G++G G D A+VP P D
Sbjct: 1603 SCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAWVPIRIPLTD 1647
>gi|260832814|ref|XP_002611352.1| hypothetical protein BRAFLDRAFT_73255 [Branchiostoma floridae]
gi|229296723|gb|EEN67362.1| hypothetical protein BRAFLDRAFT_73255 [Branchiostoma floridae]
Length = 2502
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 34 QLANLS--VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL 91
QL++LS V ++ S S G L V+GK++ WG+GD G+LG P L L
Sbjct: 2217 QLSSLSQYVVRKVSVHSG-GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL 2275
Query: 92 -DDHVRCIALGGVHSIALTS 110
VR IA G HS A+TS
Sbjct: 2276 KSKRVRDIACGSSHSAAVTS 2295
>gi|440801261|gb|ELR22281.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 1075
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSI 106
SCG H L G ++ WG G G+LG G + PTL HV +A G HS+
Sbjct: 253 SCGSSHFLALTKEGHVFSWGSGRFGKLGHGSLEDIMAPTLVQSIYHHHVTKVATGPRHSV 312
Query: 107 ALT 109
ALT
Sbjct: 313 ALT 315
>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
Length = 560
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
+++ R + CG HS V + G L++WG+GD GRLG G VP P + + +
Sbjct: 262 ALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREASQV 321
Query: 98 IALGGVHSIALTS 110
+ G H++ L++
Sbjct: 322 VC-GFNHTVVLST 333
>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
Kuenenia stuttgartiensis]
Length = 620
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 46 NSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
++ +CG HS + NGK+ WG D G+LG G ++ P L D V +A G HS
Sbjct: 416 SAVACGSDHSLAIRNGKVKSWGLNDEGQLGDGSTRSSSAPLDVTGLSDIVY-VAAGESHS 474
Query: 106 IALTS 110
+A+TS
Sbjct: 475 LAITS 479
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVH 104
S G HS L GKLW WG + G+LG G D+ P +N + + GG H
Sbjct: 161 SGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTT--ITAVDCGGDH 218
Query: 105 SIALTSLA 112
S+AL SL
Sbjct: 219 SMALDSLG 226
>gi|255550918|ref|XP_002516507.1| Protein pim1, putative [Ricinus communis]
gi|223544327|gb|EEF45848.1| Protein pim1, putative [Ricinus communis]
Length = 565
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 49 SCGLFHSGLVVNG--KLWIWGKGDGGRLGFGHEDAAFVP--TLNPYLDDHVR 96
+CG H+ LV NG KLW WG+G G LG G E VP L P L + V+
Sbjct: 382 TCGAAHTVLVTNGGYKLWSWGRGRSGALGNGKEIDVLVPGVMLWPPLTEVVK 433
>gi|291296242|ref|YP_003507640.1| chromosome condensation regulator RCC1 [Meiothermus ruber DSM 1279]
gi|290471201|gb|ADD28620.1| regulator of chromosome condensation RCC1 [Meiothermus ruber DSM
1279]
Length = 593
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 20 VVRLFNSENSPNWNQLANLSVSKRFSNS-SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH 78
V L +S N + A L++ +N+ ++ G F + + NG++W WG G+LG
Sbjct: 198 VYNLIVQASSGNLTRTAPLTLRVLRANTLAAGGYFSAAIKPNGQVWSWGDNTYGQLGRAT 257
Query: 79 EDAA-FVPTLNPYLDDHVRCIALGGVHSIALTS 110
+ PT ++D V I+LG H+IALT+
Sbjct: 258 TSPSDSTPTQASLINDAVS-ISLGEYHAIALTN 289
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
L +G +W WG G LG G VPT L V+ IA GG HS+AL
Sbjct: 394 ALKADGSVWAWGDNPNGELGTGDITPYSVPTAVSNLPG-VKAIAAGGNHSVAL 445
>gi|296134345|ref|YP_003641592.1| Ig domain-containing protein group 2 domain-containing protein
[Thermincola potens JR]
gi|296032923|gb|ADG83691.1| Ig domain protein group 2 domain protein [Thermincola potens JR]
Length = 4140
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
+G +W WGK D G+LG G + F P P L V+ +A G H++ L +
Sbjct: 2513 DGTVWTWGKNDSGQLGDGTYTSRFSPGQVPGLTG-VKAVAAGANHTVVLKT 2562
>gi|410988349|ref|XP_004000448.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Felis
catus]
Length = 993
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
NSE + N+ V ++ + SCG +HS V G+L+ +G+ + G+LG +
Sbjct: 167 NSEGQIGLKDVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPN 226
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ +P P + + V +A GG H++ LT AV
Sbjct: 227 QLLCNHRMPQPVPGIPEKVVQVACGGGHTVVLTEKAV 263
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 46 NSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALG 101
+S SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L + ++ G
Sbjct: 298 SSISCGENHTALITDIGLMYTFGDGRYGKLGLGLENFTNQFLPTLCSHFLRFIAQLVSCG 357
Query: 102 GVHSIAL 108
G H +
Sbjct: 358 GCHMLVF 364
>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1043
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+C ++H+ +V + KL+ WG GD RLG G+++ +PT ++ +D +
Sbjct: 416 ACSIWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH 475
Query: 97 CIALGGVHSIALTS 110
IA G ++ALT+
Sbjct: 476 KIACGHTFTVALTT 489
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALG 101
F +CG H ++ + +++ WGKG GRLG G + PT L D HV+ ++ G
Sbjct: 525 FVEEIACGDHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRTPTCVEALRDRHVKSLSCG 584
>gi|296445910|ref|ZP_06887861.1| regulator of chromosome condensation RCC1 [Methylosinus
trichosporium OB3b]
gi|296256578|gb|EFH03654.1| regulator of chromosome condensation RCC1 [Methylosinus
trichosporium OB3b]
Length = 484
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 31/66 (46%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
GL L + G + WG G+LG G + +VP L V IA G HS ALTS
Sbjct: 190 GLHTCALTIAGAVKCWGSNAKGQLGDGTKLDRYVPVAVQGLSSGVVAIAAGAEHSCALTS 249
Query: 111 LAVEEC 116
+ +C
Sbjct: 250 VGAVKC 255
>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 422
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNP--YLDD-HVRCIALGGVH 104
S G HS + +G+L++WGK G+LG G V T YL D VR +ALG H
Sbjct: 128 SAGNHHSCAVTADGELFVWGKNSSGQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEH 187
Query: 105 SIALT 109
SIA+T
Sbjct: 188 SIAVT 192
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYL----DDHVRCIALGGVHSIALT 109
+WG GD GRLG G ++ + PT P+ D +A GG H++ LT
Sbjct: 38 LWGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLT 86
>gi|414870472|tpg|DAA49029.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 469
Score = 40.0 bits (92), Expect = 0.30, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---DDHVRCIALGGVHSIALT 109
K++ WG+G+ GRLGFG + ++ + L L +D V+ ++ GG HS+ALT
Sbjct: 350 KVYAWGRGEHGRLGFGDDKSSRMVPLKVELLAGEDIVQ-VSCGGTHSVALT 399
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+ G FH+ L +G LW WG + G+LG G P L D + IA GG HS
Sbjct: 254 AVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSHPIRVEGLSDLSLVDIAAGGWHST 313
Query: 107 ALT 109
ALT
Sbjct: 314 ALT 316
>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
Length = 1122
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F SCG H ++ + +L+ WG+G GRLG G D PT+ L D H++ I+ G
Sbjct: 577 FVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDQKSPTMVEALKDRHIKNISCG 636
Query: 102 GV 103
Sbjct: 637 ST 638
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVH 104
S +CG +HS L NGKL+ G G G LG G D+ P L H +A G H
Sbjct: 414 SVACGTWHSALATSNGKLFTIGDGRFGVLGHGDRDSVAYPKEVQLLSGHKAIKVACGVWH 473
Query: 105 SIAL 108
S A+
Sbjct: 474 SAAI 477
>gi|196004750|ref|XP_002112242.1| hypothetical protein TRIADDRAFT_56074 [Trichoplax adhaerens]
gi|190586141|gb|EDV26209.1| hypothetical protein TRIADDRAFT_56074 [Trichoplax adhaerens]
Length = 417
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
+C + H+ L GK++ WG+G G+LG G+++ AF P Y DD
Sbjct: 348 ACSINHAVALSDTGKVYTWGRGSFGKLGIGNDEDAFAPCHYYYDDD 393
>gi|50543738|ref|XP_500035.1| YALI0A13299p [Yarrowia lipolytica]
gi|49645900|emb|CAG83964.1| YALI0A13299p [Yarrowia lipolytica CLIB122]
Length = 498
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 59 VNGKLWIWGKGDGGRLGFGHEDAAFV--PTLNPYLDDHVRCIALGGVHSIALTS 110
V+ +++ +G GD LG G E A+ V P L+PYL + IA+GG H + L S
Sbjct: 86 VDCEVFAFGTGDMCELGLGPEKASTVKRPRLSPYLSKEIVDIAVGGQHGLVLDS 139
>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1711
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGL-VVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CGL+H+ + G L+ GK D G+LG GH V +L ++ V +A G HS+
Sbjct: 520 ACGLYHTIICTATGGLFACGKNDYGQLGLGHNRQIKVASLVSLPNEMVSYVASGYYHSVV 579
Query: 108 LTS 110
+T+
Sbjct: 580 VTN 582
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVPTLNPYLDDHVRCIALGGVHSI 106
+CG HS + + G+L+ WG G+ GRLG G D A + L + V + GG H+
Sbjct: 559 ACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTA 618
Query: 107 ALTS 110
LT+
Sbjct: 619 VLTA 622
>gi|395520571|ref|XP_003764401.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Sarcophilus harrisii]
Length = 241
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDHVRCIALGGVHS 105
SCG +HS V G+L+ +G+ + G+LG E +P L + V +A GG H+
Sbjct: 159 SCGYYHSAFVTTEGELYTFGEPENGKLGLSPEQLKNHRIPQLVLGIPGKVNQVACGGGHT 218
Query: 106 IALT 109
+ALT
Sbjct: 219 VALT 222
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 295 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 354
Query: 107 ALTS 110
A+++
Sbjct: 355 AVSA 358
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 460 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 518
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSI 106
SCG HS V N G+++ WG G G+LG G +P T+N V +A G HSI
Sbjct: 99 SCGKEHSLAVCNKGRVYSWGAGTFGQLGTGELGDRLIPKTINALSKYKVIQVACGHDHSI 158
Query: 107 ALTS 110
ALT+
Sbjct: 159 ALTN 162
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 47 SSSCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S + GL+HS +V V+G +W WG G+LG G VP+ P L V I G HS
Sbjct: 553 SVAAGLYHSLVVKVDGTVWAWGSNYEGQLGGGTTTIRPVPSQTPNLTG-VVAITAGLYHS 611
Query: 106 IALTS 110
+AL +
Sbjct: 612 LALKT 616
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G HS L +G +W WG GRLG G +P L ++ IA G HS+A
Sbjct: 154 AAGFSHSLALKTDGTVWAWGSNGAGRLGDGTTTQRLMPVQVQGLPT-IKAIAAGNAHSLA 212
Query: 108 L 108
L
Sbjct: 213 L 213
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 59 VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
++G +W WG G+LG G VPT P L V +A G HS+AL +
Sbjct: 815 MDGTVWTWGNNAKGQLGDGTTTRRLVPTQVPGLTG-VVAVAAGYAHSLALKA 865
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ GL+HS L +G +W WG G+LG G+ VPT P V + G HS+A
Sbjct: 605 TAGLYHSLALKTDGTVWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGGVS-LGAGIYHSLA 663
Query: 108 LTS 110
+ +
Sbjct: 664 IKT 666
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 47 SSSCGLFHSGLV--VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVH 104
S + G +H GL +G LW WG G+LG G PTL P L V ++ H
Sbjct: 902 SMASGTYH-GLARKADGTLWAWGYNAHGQLGIGTTTTRLAPTLVPSLSG-VVSLSATHQH 959
Query: 105 SIAL 108
S+AL
Sbjct: 960 SLAL 963
>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
Length = 516
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 39 SVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC 97
+++ R + CG HS V + G L++WG+GD GRLG G VP P + + +
Sbjct: 262 ALASRVIVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIREASQV 321
Query: 98 IALGGVHSIALTS 110
+ G H++ L++
Sbjct: 322 VC-GFNHTVVLST 333
>gi|281347459|gb|EFB23043.1| hypothetical protein PANDA_001337 [Ailuropoda melanoleuca]
Length = 1199
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
NSE + N+ V ++ + SCG +HS V G+L+ +G+ + G+LG
Sbjct: 157 NSEGQIGLKNITNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPK 216
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ +P P + + V +A GG H++ LT AV
Sbjct: 217 QLLVNHRMPQSVPGIPEKVVQVACGGGHTVVLTEKAV 253
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 5 DEELYIFSL--MAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVN-G 61
++ +Y F L + L LF + + +L +S F CG H+ L+ + G
Sbjct: 250 EKAVYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIF-----CGENHTALITDLG 304
Query: 62 KLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVHSIALTS 110
++ +G G G+LG G E+ F PTL + +L V+ +A GG H++ +
Sbjct: 305 LMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVFAT 356
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 7/56 (12%)
Query: 58 VVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
++ G++W WG GD G+LG G D P L L D VRC G S+ALT
Sbjct: 406 LIFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSVALT 458
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 2805 HSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 2864
Query: 107 ALTS 110
A+TS
Sbjct: 2865 AITS 2868
Score = 35.4 bits (80), Expect = 7.1, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2964 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3023
Query: 108 LT 109
+T
Sbjct: 3024 VT 3025
>gi|326431795|gb|EGD77365.1| NEK/NEK8 protein kinase [Salpingoeca sp. ATCC 50818]
Length = 969
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 49 SCGLFHSGLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPT 86
+CG H ++ G+ ++ WG G+ G+LG G ED F PT
Sbjct: 589 ACGESHVAVITEGRDMYTWGIGEYGKLGLGDEDDVFTPT 627
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Query: 36 ANLSVSKRFSNSSSCGLFHSGLVVNG--KLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-D 92
A S+ R + S CG +S V G +++ WG GD GRLG G F+P P L
Sbjct: 55 AVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAG 114
Query: 93 DHVRCIALGGVHSIALTS 110
V +A G H++ T+
Sbjct: 115 RRVASVACGDTHTLVATA 132
>gi|301755358|ref|XP_002913533.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Ailuropoda melanoleuca]
Length = 1011
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
NSE + N+ V ++ + SCG +HS V G+L+ +G+ + G+LG
Sbjct: 177 NSEGQIGLKNITNVCVPQQVTVGKPISWISCGYYHSAFVTTEGELYTFGEPESGKLGLPK 236
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ +P P + + V +A GG H++ LT AV
Sbjct: 237 QLLVNHRMPQSVPGIPEKVVQVACGGGHTVVLTEKAV 273
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 5 DEELYIFSL--MAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVN-G 61
++ +Y F L + L LF + + +L +S F CG H+ L+ + G
Sbjct: 270 EKAVYTFGLGQFGQLGLGTFLFETPVPKVIEHIKDLKISSIF-----CGENHTALITDLG 324
Query: 62 KLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVHSIALTS 110
++ +G G G+LG G E+ F PTL + +L V+ +A GG H++ +
Sbjct: 325 LMYTFGDGRHGKLGLGLENFTNQFTPTLCSNFLRFIVQLVACGGCHTLVFAT 376
>gi|346972826|gb|EGY16278.1| BTB/POZ domain-containing protein [Verticillium dahliae VdLs.17]
Length = 1600
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 11 FSLMAEEALVVRLFNSENSPNWNQLANLSVSK-RFSNSSSCGLFHSGLVVN---GKLWIW 66
++ ++ V+ + E+ P +Q+ L+ ++ + + FH+ ++ L++
Sbjct: 281 LEMVKDDPSVMSPSSREDPPALDQIPALTKNRPMYIQDAVLAKFHTAILTTDPVSNLYVC 340
Query: 67 GKGDGGRLGFGHEDAA--FVPTLNPYLDDHVRCIALGGVHSIALT 109
G G GRLG G E+ F+P D V +ALG H++A+T
Sbjct: 341 GVGRSGRLGLGDENTQFRFLPVQGSLADKKVTQVALGQNHTMAVT 385
>gi|340379689|ref|XP_003388359.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 1950
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 40 VSKRFSNSSSCGLFHSGLV-VNGKLWIWGKGDGGRLGFG 77
+S + S SCG HS V ++ +LW WG+G+ GRLG G
Sbjct: 204 LSNKVIRSVSCGNRHSAAVTIDNELWTWGEGEHGRLGHG 242
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHSIALT 109
NGK++ WG+G+ G+LG G+ P L L + V R ++ G HS A+T
Sbjct: 173 NGKVYSWGEGEYGKLGHGNNTTQKTPKLIAGLSNKVIRSVSCGNRHSAAVT 223
>gi|226311362|ref|YP_002771256.1| extracellular serine protease precursor [Brevibacillus brevis NBRC
100599]
gi|226094310|dbj|BAH42752.1| putative extracellular serine protease precursor [Brevibacillus
brevis NBRC 100599]
Length = 3487
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 45 SNSSSCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLN 88
SNS S G HS +V +G +W+WGK + G+LG G + VP N
Sbjct: 3441 SNSLSAGGAHSLMVEADGTVWVWGKNENGQLGDGTTQDSNVPVRN 3485
>gi|71659566|ref|XP_821504.1| regulator of chromosome condensation (RCC1) [Trypanosoma cruzi
strain CL Brener]
gi|70886886|gb|EAN99653.1| regulator of chromosome condensation (RCC1), putative [Trypanosoma
cruzi]
Length = 406
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCG ++ L +G ++ WG+ + G+L + +N Y DD V ++ G HS+
Sbjct: 37 SCGAHYTLALTSSGSVYGWGRNESGQLALPAPTVNYPTLINTYFDDRVVKVSCGESHSLF 96
Query: 108 LTS 110
LTS
Sbjct: 97 LTS 99
>gi|356508920|ref|XP_003523201.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 417
Score = 39.7 bits (91), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 9/105 (8%)
Query: 8 LYIFSLMAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIW 66
+++F E L ++ + P+ ++ L SK + CG +H+ ++ N G+L+ W
Sbjct: 253 VFVFGERGIEKLRLKEMSDATKPSL--ISELPSSKEVA----CGGYHTCVLTNSGELYTW 306
Query: 67 GKGDGGRLGFGHEDAAFVP--TLNPYLDDHVRCIALGGVHSIALT 109
G + G LG G D +P P+L V ++ G H+ A++
Sbjct: 307 GSNENGCLGIGSSDVIHLPEKVQGPFLKSSVSQVSCGWKHTAAIS 351
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNP-YLDDHVRCIALGGVHSIALT 109
+WG GD GRLG G+ D+ + P + P + + + IA GG H++ LT
Sbjct: 36 LWGNGDYGRLGLGNLDSQWKPVVCPAFRNKTLNAIACGGAHTLFLT 81
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFV--PTLNPYLDD-HVRCIALGGVH 104
S G HS + V+G+L++WGK G+LG G V PT YL +++ ALG H
Sbjct: 123 SAGYNHSCAITVDGELYMWGKNTSGQLGLGKRAPNIVPLPTKVEYLKGINIKMAALGSEH 182
Query: 105 SIALT 109
S+A++
Sbjct: 183 SVAIS 187
>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 962
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 9/71 (12%)
Query: 48 SSCGLFHSGLVVN--------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCI 98
++CG++HS VV+ GKL+ WG GD G+LG G + +P LD + +
Sbjct: 468 TACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQQV 527
Query: 99 ALGGVHSIALT 109
A G ++AL+
Sbjct: 528 ACGQSITVALS 538
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGK--LWIWGKGDGGRLGFGHEDAAFVPTL 87
+ K F +CG +H V+N K ++ WGKG G+LG G + +PTL
Sbjct: 567 LGKSFVQEVACG-YHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRRMPTL 615
>gi|281211994|gb|EFA86155.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 537
Score = 39.7 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDA-AFVPTLNPYLDDH---VRCIALGGV 103
SCG H+ L +G+++ G G GRLG G +VPTL P+ ++ V ++ GG
Sbjct: 349 SCGATHTLFLAESGRVYSCGWGSEGRLGLGDNTTNRYVPTLIPFFHENGIRVTQVSAGGA 408
Query: 104 HSIALT 109
HS+ LT
Sbjct: 409 HSMVLT 414
>gi|156396924|ref|XP_001637642.1| predicted protein [Nematostella vectensis]
gi|156224756|gb|EDO45579.1| predicted protein [Nematostella vectensis]
Length = 1152
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIALGGVHSIALT 109
L ++GK++ WG GD G+LG G+ +P L + V CIA G HS A+T
Sbjct: 464 ALTLDGKVYSWGDGDYGKLGHGNSQTQKIPKLVEGALGNKVVCCIAAGYRHSAAVT 519
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G HS V +G+L+ WG+GD GRLG G ++ VP + + V +A G H++
Sbjct: 509 AAGYRHSAAVTEDGELYTWGEGDYGRLGHGDNNSRNVPVQVKDVAN-VGQVACGSAHTVC 567
Query: 108 LT 109
++
Sbjct: 568 VS 569
>gi|375264642|ref|YP_005022085.1| regulator of chromosome condensation [Vibrio sp. EJY3]
gi|369839966|gb|AEX21110.1| regulator of chromosome condensation [Vibrio sp. EJY3]
Length = 486
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 44 FSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH 78
F + S G HSG +++GKLW WG+ + G+ G G+
Sbjct: 115 FGHQVSAGGAHSGAILDGKLWTWGRNNKGQTGHGY 149
>gi|195503156|ref|XP_002098533.1| GE23888 [Drosophila yakuba]
gi|194184634|gb|EDW98245.1| GE23888 [Drosophila yakuba]
Length = 1974
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIAL 108
G +H+ V NGKL++WG G G+LG G + P L + + I+LG H++ L
Sbjct: 1247 GQYHNAAVANGKLYMWGWGVYGQLGQGSCENIATPQLVSFFQFKKILQISLGHAHTLVL 1305
>gi|47212900|emb|CAF90790.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2131
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVP----TLNPYLDDHVRCIALGGV 103
SCG HS +V +GKL+ +G GD GRLG G+ +P L Y V +A G
Sbjct: 1288 SCGFKHSAVVTADGKLFTFGNGDYGRLGLGNTSNKKLPERVAALEGYQIGQVANVACGLN 1347
Query: 104 HSIALTS 110
H++ +++
Sbjct: 1348 HTLVVSA 1354
>gi|301107772|ref|XP_002902968.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098086|gb|EEY56138.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 494
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
SCG H G V++ G+L+++G G GRLG G+E VPTL
Sbjct: 84 SCGSVHGGFVLDVGELYMFGCGSYGRLGTGNEANTNVPTL 123
>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
Length = 401
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY----LDDHVRCIALGGVH 104
SCG H G+V KL++ G+G G+LG G E + P + Y + ++V IA GG H
Sbjct: 336 SCGQAHVGIVSKNKLYMHGRGKEGQLGRGSETES--PNSSRYSPLLVMENVIKIACGGSH 393
Query: 105 SIALTS 110
S A+ +
Sbjct: 394 SFAVVN 399
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 49 SCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY 90
+CG +H + + +G+L+ WG D G+LG +++A +P+ Y
Sbjct: 118 ACGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKY 160
>gi|72391922|ref|XP_846255.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359875|gb|AAX80302.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70802791|gb|AAZ12696.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 639
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 12 SLMAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLV-VNGKLWIWGKGD 70
SL AEE VV P ++L + G +HSG + G+L+ WG G
Sbjct: 361 SLSAEERTVVLEPQVVRVPTEHKLVRIHA----------GQWHSGAINAAGELFTWGVGY 410
Query: 71 GGRLGFGHEDAAFVP--TLNPYLDDHVRCIALGGVHSIALTSLAVEEC 116
GRLG G P + HV +A G H++ALT C
Sbjct: 411 QGRLGHGDNGPVMRPKKVVGALTGRHVVDVACGSFHTVALTDRGAVYC 458
>gi|409911788|ref|YP_006890253.1| lipoprotein [Geobacter sulfurreducens KN400]
gi|298505363|gb|ADI84086.1| ATS1 domain repeat protein [Geobacter sulfurreducens KN400]
Length = 2082
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD--HVRCIALGGVHSIAL 108
G F GL NG LW WG G+LG G + +P P + D + R A G HS+A+
Sbjct: 407 GAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPV--PVVGDAGNWRTTATGTAHSVAV 464
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 2786 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 2845
Query: 107 ALTS 110
A+++
Sbjct: 2846 AVSA 2849
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 2951 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 3009
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
S G + L +GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 1889 SGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAA 1948
Query: 108 LTS 110
LTS
Sbjct: 1949 LTS 1951
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2047 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 2106
Query: 108 LT 109
+T
Sbjct: 2107 VT 2108
Score = 35.4 bits (80), Expect = 6.7, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 1940 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQ 1999
Query: 105 SIALT 109
++ALT
Sbjct: 2000 TLALT 2004
>gi|290986414|ref|XP_002675919.1| predicted protein [Naegleria gruberi]
gi|284089518|gb|EFC43175.1| predicted protein [Naegleria gruberi]
Length = 976
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALT 109
G + L +G ++++G D G+LG GH++ + PT P + + +ALG HS+ +T
Sbjct: 784 GYYAGFLTASGAVYMFGLNDKGQLGLGHQNNVYTPTKVPIPNGELAIDVALGTEHSLIIT 843
>gi|261329865|emb|CBH12848.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 640
Score = 39.7 bits (91), Expect = 0.40, Method: Composition-based stats.
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 13/108 (12%)
Query: 12 SLMAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLV-VNGKLWIWGKGD 70
SL AEE VV P ++L + G +HSG + G+L+ WG G
Sbjct: 361 SLSAEERTVVLEPQVVRVPTEHKLVRIHA----------GQWHSGAINAAGELFTWGVGY 410
Query: 71 GGRLGFGHEDAAFVP--TLNPYLDDHVRCIALGGVHSIALTSLAVEEC 116
GRLG G P + HV +A G H++ALT C
Sbjct: 411 QGRLGHGDNGPVMRPKKVVGALTGRHVVDVACGSFHTVALTDRGAVYC 458
>gi|42563438|ref|NP_186900.3| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
gi|110735845|dbj|BAE99899.1| hypothetical protein [Arabidopsis thaliana]
gi|332640299|gb|AEE73820.1| regulator of chromosome condensation domain-containing protein
[Arabidopsis thaliana]
Length = 393
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED--AAFVPT-LNPYLDDHVRCIALGGVH 104
+ G +HS L G+++ WG+G+ GRLG G D + VP +N ++ + ++ GG H
Sbjct: 254 AAGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTH 313
Query: 105 SIALT 109
S+ALT
Sbjct: 314 SVALT 318
>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
Length = 1062
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ ++ + KL+ WG GD RLG G ++ +PT ++ +D +
Sbjct: 429 ACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFH 488
Query: 97 CIALGGVHSIALTS 110
+A G ++ALT+
Sbjct: 489 QLACGHTMTVALTT 502
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG+ H LV G+++ WG+ GGRLG G ++ P L +L ++V +A G H+
Sbjct: 270 ACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTC 329
Query: 107 ALTS 110
A+++
Sbjct: 330 AVST 333
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F SCG +H ++ + +++ WG+G GRLG G + PT L D +V+ I+ G
Sbjct: 538 FVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCG 597
>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
Length = 620
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 39 SVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDH 94
SV + + CG H+ L+ +G L+ +G G G+LG G E+ FVPTL + +L
Sbjct: 286 SVKDKKISHVCCGENHTALITESGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLKYI 345
Query: 95 VRCIALGGVHSIALTS 110
V +A GG H + +
Sbjct: 346 VHLVACGGCHMLVFAT 361
>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Hydra magnipapillata]
Length = 1679
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS + +G L+ WG+G+ GRLG G VPTL +D + +A G H++
Sbjct: 481 SAGSRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQ-VAAGCSHTVV 539
Query: 108 LT 109
L+
Sbjct: 540 LS 541
>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
Length = 1082
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++H+ ++ + KL+ WG GD RLG G ++ +PT ++ +D +
Sbjct: 432 ACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFH 491
Query: 97 CIALGGVHSIALTS 110
+A G ++ALT+
Sbjct: 492 QLACGHTMTVALTT 505
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG+ H LV G+++ WG+ GGRLG G ++ P L +L ++V +A G H+
Sbjct: 273 ACGVRHVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPHLVEFLAVNNVDFVACGEYHTC 332
Query: 107 ALTS 110
A+++
Sbjct: 333 AVST 336
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F SCG +H ++ + +++ WG+G GRLG G + PT L D +V+ I+ G
Sbjct: 541 FVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDRNVKSISCG 600
>gi|359473366|ref|XP_002273996.2| PREDICTED: uncharacterized protein LOC100250008 [Vitis vinifera]
Length = 1047
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 40 VSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
++ F +CG +H L +++ WGKG G+LG G D PTL +L D
Sbjct: 567 IANSFVEEVACGSYHVAVLTSKTEVYTWGKGTNGQLGHGDNDHRNTPTLVDFLKD 621
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 17/79 (21%)
Query: 49 SCGLFHSGLVVN----------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD 92
+CG++H+ VV GKL+ WG GD GRLG G ++ VP L
Sbjct: 457 ACGVWHTAAVVELMIASSSFESSGSSSSGKLFTWGDGDKGRLGHGDKEPRLVPQSVTALI 516
Query: 93 DHVRC-IALGGVHSIALTS 110
+ C +A G S+ALT+
Sbjct: 517 NESFCQVACGHNLSVALTT 535
>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
tuberosum]
Length = 951
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
SCG H+ LV G+ + WG+ GGRLG G E D + + + +V IA G HS
Sbjct: 314 SCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSC 373
Query: 107 ALTS 110
A+TS
Sbjct: 374 AVTS 377
Score = 35.4 bits (80), Expect = 6.9, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
SCG H ++ + +++ WGKG+ G+LG G + PTL L D V+ I G S
Sbjct: 590 SCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSA 649
Query: 107 AL 108
A+
Sbjct: 650 AI 651
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
G L+ WG+GD GRLG G P L H + ++LGG HS+ALT
Sbjct: 322 GYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLGGGHSMALT 371
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGV 103
S G H+ ++ + G L+ WG G G+LG G ++ P L + + V +A GG
Sbjct: 167 STGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGGK 226
Query: 104 HSIALT 109
H++ALT
Sbjct: 227 HTVALT 232
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 23/44 (52%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
+RF N SS + NG L+ WG G G RLG +E+ +P
Sbjct: 476 ERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLIP 519
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 1751 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 1810
Query: 107 ALTS 110
A+++
Sbjct: 1811 AVSA 1814
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 1916 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 1974
>gi|345560200|gb|EGX43325.1| hypothetical protein AOL_s00215g61 [Arthrobotrys oligospora ATCC
24927]
Length = 1576
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 53 FHSGLV---VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
FHS ++ ++ L+I G G GGRLG GH+ F L V +ALG H++A+
Sbjct: 280 FHSAIITTALSNNLYICGHGQGGRLGLGHQSTEFT-FRRVELPRRVSTVALGQGHTVAV 337
>gi|158253947|gb|AAI48319.1| HERC2 protein [Homo sapiens]
Length = 703
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 24 FNSENSPNWNQLANLS--VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+S P Q+ LS V K+ + S G + L V+GK++ WG+GD G+LG
Sbjct: 495 ISSGTVPIPRQITALSSYVVKKVAVHSG-GRHATALTVDGKVFSWGEGDDGKLGHFSRMN 553
Query: 82 AFVPTLNPYLD-DHVRCIALGGVHSIALTS 110
P L L +R IA G HS ALTS
Sbjct: 554 CDKPRLIEALKTKRIRDIACGSSHSAALTS 583
>gi|323449747|gb|EGB05633.1| hypothetical protein AURANDRAFT_66284 [Aureococcus anophagefferens]
Length = 1328
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 23/40 (57%)
Query: 48 SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
++CG L G+++ WG GDGGRLG G + PTL
Sbjct: 281 AACGAHSLALDAEGRVFSWGDGDGGRLGHGDDAGKAEPTL 320
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L NG ++ WGKGD RLG G + PTL L V +++G +H +A
Sbjct: 2950 CGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLA 3009
Query: 108 LT 109
+T
Sbjct: 3010 VT 3011
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
HSG L +G+++ WG+GD G+LG G + P L+ VR +A G HS
Sbjct: 2791 HSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPRCIEALNGFRVRDVAAGSNHSA 2850
Query: 107 ALTS 110
A+TS
Sbjct: 2851 AVTS 2854
Score = 37.0 bits (84), Expect = 2.6, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG HS + G+L+ WGKG GRLG G D P L
Sbjct: 3759 ACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKL 3798
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 9/62 (14%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-----IALGGVHSIALTS 110
L G+++ WG+G+ G+LG G++ +P P + + +R +A GG HS A+T+
Sbjct: 3715 ALSSEGEVYSWGEGEDGKLGHGNK----LPCDRPRIIESLRGKDVVDVACGGAHSAAITA 3770
Query: 111 LA 112
L
Sbjct: 3771 LG 3772
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL--GGVHSIALTS 110
+GK + G+G GRLG GH P L H VR +A+ GG H++ALT+
Sbjct: 2749 SGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTA 2802
>gi|307105210|gb|EFN53460.1| hypothetical protein CHLNCDRAFT_136724 [Chlorella variabilis]
Length = 1660
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSI 106
SCG FH V +G+L+ WG+G GG+LG G + P+L + V +A G HS
Sbjct: 347 SCGPFHCAAVSSDGQLFTWGEGFGGKLGHGDQANRAHPSLVHALAGRQVLEVACGVWHSA 406
Query: 107 ALTS 110
A+ S
Sbjct: 407 AIVS 410
>gi|291407336|ref|XP_002719873.1| PREDICTED: retinitis pigmentosa GTPase regulator-like [Oryctolagus
cuniculus]
Length = 882
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 46 NSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALG 101
+S SCG H+ L+ G+++ +G G G+LG G E+ FVPTL +L ++ +A G
Sbjct: 298 SSISCGENHTALITELGRMYTFGDGRYGKLGLGLENFTNQFVPTLCCDFLRFMIQLVACG 357
Query: 102 GVHSIALTS 110
G H + +
Sbjct: 358 GCHMVIFAT 366
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGH 78
NSE + N+ V + + SCG +HS V ++G+L+ +G+ + G+LG
Sbjct: 167 NSEGQIGLKNVTNVCVPHQVTIGKPISWISCGYYHSAFVTMDGELYTFGECENGKLGLPE 226
Query: 79 E--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
E P L + + V +A GG H++ LT V
Sbjct: 227 ELLINHKTPQLVTRIPEKVIQVACGGGHTVVLTETIV 263
>gi|224083557|ref|XP_002307065.1| predicted protein [Populus trichocarpa]
gi|222856514|gb|EEE94061.1| predicted protein [Populus trichocarpa]
Length = 419
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%), Gaps = 3/48 (6%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTL---NPYLDDHVRCIALGGVHSIALT 109
+WG GD GRLG+G+ D+ + P L + + + +++ I+ GG H++ LT
Sbjct: 34 VWGNGDYGRLGYGNLDSMWRPKLMNSSSFHNSNLKSISCGGAHTLFLT 81
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH--EDAAFVPTLNPYLDD-HVRCIALGGVH 104
S G HS + V+G+L+ WGK G+LG G E+ VPT L +++ +AL H
Sbjct: 123 SAGYHHSCAITVDGELYTWGKNSNGQLGLGKKAENVVPVPTKVECLSGINIKMVALASEH 182
Query: 105 SIALT 109
SIA+T
Sbjct: 183 SIAVT 187
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 9/110 (8%)
Query: 3 ENDEELYIFSLMAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNG- 61
+ + +YIF A + L N+ +P+ + L +S +CG +H+ ++ +G
Sbjct: 248 DENGSVYIFGEKAVDKLAFGDANNATTPS--MIGKLP----YSQEVACGGYHTCVITSGG 301
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVP--TLNPYLDDHVRCIALGGVHSIALT 109
+L+ WG + G LG G D +P P+L V ++ G H+ A++
Sbjct: 302 ELYTWGSNENGCLGNGSIDVLHIPERVEGPFLRSPVEKVSCGWKHTAAIS 351
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 2593 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 2652
Query: 107 ALTS 110
A+++
Sbjct: 2653 AVSA 2656
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 2758 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 2816
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 1720 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 1779
Query: 107 ALTS 110
A+++
Sbjct: 1780 AVSA 1783
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 1885 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 1943
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 13/70 (18%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH-----EDAAFVPTLN--PYLDDHVRCIAL 100
+CG HS L ++G L+ WG G+LG G + A V +LN P++ I+
Sbjct: 146 ACGCNHSMALTISGHLFCWGDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFM-----LISA 200
Query: 101 GGVHSIALTS 110
GG HS AL+S
Sbjct: 201 GGAHSFALSS 210
>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
Length = 1127
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
SCG H+ LV G+ + WG+ GGRLG G E D + + + +V IA G HS
Sbjct: 314 SCGNRHAMLVTKQGEAFSWGEEAGGRLGHGAETDVSHPKLIKNFKGMNVELIACGEYHSC 373
Query: 107 ALTS 110
A+TS
Sbjct: 374 AVTS 377
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
SCG H ++ + +++ WGKG+ G+LG G + PTL L D V+ I G S
Sbjct: 590 SCGSHHVAVLTSRTEVYTWGKGENGQLGHGDCENKCTPTLVDILRDKQVKRIVCGSNFSA 649
Query: 107 AL 108
A+
Sbjct: 650 AI 651
>gi|413923469|gb|AFW63401.1| putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 502
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 44 FSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
F SCG H L +NGK++ WGKG G+LG G PTL L+D
Sbjct: 10 FVKDISCGSSHVAVLAMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALED 60
>gi|453232423|ref|NP_505392.3| Protein GLO-4 [Caenorhabditis elegans]
gi|393793285|emb|CCD68933.2| Protein GLO-4 [Caenorhabditis elegans]
Length = 1386
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDHVRCIALGGVHS 105
+CG FHS + +G LW +G G G+LG G + + VPT L V IA G H+
Sbjct: 827 ACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHT 886
Query: 106 IALTSLAVEECNRCLILG 123
+ LT + R L+ G
Sbjct: 887 VVLT-----DTGRVLVCG 899
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 47 SSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP--TLNPYLDDHVRCIALGGV 103
S +CGL HS L+ + G L+ WGKG +LG G+++ P P V ++LG
Sbjct: 1020 SVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVN-VSLGNN 1078
Query: 104 HSIALT 109
H+IA T
Sbjct: 1079 HTIAST 1084
>gi|290987325|ref|XP_002676373.1| RhoGEF domain-containing protein [Naegleria gruberi]
gi|284089975|gb|EFC43629.1| RhoGEF domain-containing protein [Naegleria gruberi]
Length = 1196
Score = 39.7 bits (91), Expect = 0.44, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 50 CGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG+ H L+ +G ++ WG G GRLG G+E VP +N + D +VR + GG S A
Sbjct: 1060 CGVNHVLVLMEDGSVYGWGAGTYGRLGNGNESDQRVPVRINFFDDKNVRGLGAGGSSSAA 1119
Query: 108 LTS 110
+ +
Sbjct: 1120 VCA 1122
>gi|62511101|sp|Q5DX34.1|RPGRH_CAEEL RecName: Full=X-linked retinitis pigmentosa GTPase regulator
homolog; AltName: Full=Gut granule loss protein 4
Length = 1392
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDHVRCIALGGVHS 105
+CG FHS + +G LW +G G G+LG G + + VPT L V IA G H+
Sbjct: 833 ACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHT 892
Query: 106 IALTSLAVEECNRCLILG 123
+ LT + R L+ G
Sbjct: 893 VVLT-----DTGRVLVCG 905
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 47 SSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP--TLNPYLDDHVRCIALGGV 103
S +CGL HS L+ + G L+ WGKG +LG G+++ P P V ++LG
Sbjct: 1026 SVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVN-VSLGNN 1084
Query: 104 HSIALT 109
H+IA T
Sbjct: 1085 HTIAST 1090
>gi|281212541|gb|EFA86701.1| hypothetical protein PPL_00504 [Polysphondylium pallidum PN500]
Length = 237
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYL--DDHVRCIALGGVH 104
SCG H+ ++ G L+ +G G+LG G + VPTL +P L + ++ +A G H
Sbjct: 111 SCGFSHTMIIDSKGDLYTFGWNGSGQLGLGDKSNRSVPTLVDPMLFCGEKLKMVAAGRAH 170
Query: 105 SIALTSLAVEECNRCLILGEEEKRRL 130
S+ALT E R G K +L
Sbjct: 171 SVALT-----ESGRLFTWGSGSKGKL 191
>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1028
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 13/51 (25%)
Query: 49 SCGLFHSGLVVN-------------GKLWIWGKGDGGRLGFGHEDAAFVPT 86
SCG++H+ V++ GKL+ WG G+ G+LG G E+ VP+
Sbjct: 463 SCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPS 513
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
+CG H+ +V G+++ WG+ GG+LG G + D + ++ + +V +A G H+
Sbjct: 304 ACGSKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDALSESNVVLVACGEFHTC 363
Query: 107 ALT 109
A+T
Sbjct: 364 AVT 366
>gi|268559042|ref|XP_002637512.1| C. briggsae CBR-GLO-4 protein [Caenorhabditis briggsae]
Length = 1100
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFG--HEDAAFVPTLNPYLDDHVRCIALGGVHS 105
+CG FHS + +G LW +G G G+LG G VPT L V +A G H+
Sbjct: 537 ACGQFHSAFICSDGSLWTFGWGIWGQLGQGGRFNSNILVPTKVNGLISKVTQVACGRAHT 596
Query: 106 IALTSLAVEECNRCLILG 123
I LT E R L+ G
Sbjct: 597 IVLT-----ENGRVLVCG 609
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 49 SCGLFHSGLVVN--GKLWIWGKGDGGRLGFG-HEDAAFVPTLNPYLDDH-VRCIALGGVH 104
SCG HS L VN G+++ WG G+ G+LG G E A +P L L DH + + G H
Sbjct: 89 SCGQAHS-LAVNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQH 147
Query: 105 SIALT 109
IAL+
Sbjct: 148 CIALS 152
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 39.3 bits (90), Expect = 0.46, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 37/77 (48%)
Query: 34 QLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
Q+ L+ ++ G L +G+++ WGK G+LG + +P L
Sbjct: 165 QVQGLATDSTIKVVAAGGNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGLPA 224
Query: 94 HVRCIALGGVHSIALTS 110
+V +A GG HS+ALTS
Sbjct: 225 NVTAVAAGGNHSLALTS 241
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL--DDHVRCIALGGVHS 105
S G HS L +G+++ WG G+LG G + P L D ++ +A GG HS
Sbjct: 126 SAGESHSLALTDDGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHS 185
Query: 106 IALTS 110
+ALTS
Sbjct: 186 LALTS 190
>gi|342185816|emb|CCC95301.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 536
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDH-VRCIALGGV 103
++ G +H+ ++ ++ WG + G+LG G ++ VPT P+LD ++ IA G
Sbjct: 67 AARVGGYHNFVITTEGVYGWGLNEDGQLGLGRGSSSCISVPTRIPFLDGKCIKDIACGAH 126
Query: 104 HSIALTSLAVEECNR 118
H+ A TS + C R
Sbjct: 127 HTFAWTSDGLYACGR 141
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSI 106
+CG HS L+ + +L+ WG+ D G+LG GH ++ VP L + V+ I+ G H+I
Sbjct: 163 TCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHNI 222
Query: 107 ALTS 110
A S
Sbjct: 223 AFVS 226
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCI--ALGGVHS 105
+CG FH+ V +G LW WG+ G+LG G +P L+ + CI A GG HS
Sbjct: 58 ACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKI-CIKAAAGGQHS 116
Query: 106 IALT 109
+ LT
Sbjct: 117 LVLT 120
>gi|319943960|ref|ZP_08018240.1| RCC1 repeat domain protein [Lautropia mirabilis ATCC 51599]
gi|319742721|gb|EFV95128.1| RCC1 repeat domain protein [Lautropia mirabilis ATCC 51599]
Length = 461
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
G+LW WG+G+ GRLG G+ED P L
Sbjct: 306 GRLWAWGRGESGRLGTGNEDDQSRPVL 332
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHED----AAFVPTLNPYLDDHVRCIALGGV 103
SCG +H+ + GKL WG+ D G+LG G ++ A FVP P + ++ + G
Sbjct: 719 SCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSAQFVPL--P-MSSKIKNASCGCY 775
Query: 104 HSIALTSLAVEECNRCLILGEEEKRRL 130
HS+ L S R ++ G K +L
Sbjct: 776 HSLILMS-----NGRVMVFGRNNKGQL 797
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 39 SVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH----EDAAFVPTLNPYLDD 93
++S + ++CGL+H+ +G+++ +GK D G+LG GH + A V T D+
Sbjct: 654 ALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDE 713
Query: 94 HVRCIALGGVHSIALT 109
+ ++ G H++ ++
Sbjct: 714 KIVAVSCGYYHTVTIS 729
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 9/91 (9%)
Query: 26 SENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAF- 83
S+ N Q L +S + N+S CG +HS +++ NG++ ++G+ + G+LG G +
Sbjct: 749 SKEHKNSAQFVPLPMSSKIKNAS-CGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSA 807
Query: 84 -----VPTLNPYLDDHVRCIALGGVHSIALT 109
VP+ N +D V IA G S LT
Sbjct: 808 DLPLPVPS-NSLANDEVVRIAAGFYSSYILT 837
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 39.3 bits (90), Expect = 0.49, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 47 SSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVH 104
S SCG HS + N G+L+ WG G GGR G G E + P ++ + + +A G +H
Sbjct: 188 SVSCGAQHSMALSNYGELYSWGCGTGGRTGHGSEAPSLSPQVVSALVGKQITSMAGGMLH 247
Query: 105 SIA 107
S A
Sbjct: 248 SAA 250
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVH 104
S G HS + +GKL+ WG+ G+LG G V T ++ D V+ +ALG H
Sbjct: 131 SAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEH 190
Query: 105 SIALT 109
SIA T
Sbjct: 191 SIATT 195
>gi|148263541|ref|YP_001230247.1| regulator of chromosome condensation, RCC1 [Geobacter
uraniireducens Rf4]
gi|146397041|gb|ABQ25674.1| regulator of chromosome condensation, RCC1 [Geobacter
uraniireducens Rf4]
Length = 1919
Score = 39.3 bits (90), Expect = 0.50, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G+ H+ + +G LW WG G+LG G D+ +PT +D R +A G H+IA
Sbjct: 283 SAGMSHTVAIKSDGSLWGWGGNWSGQLGTGTNDSQNIPTRIDIANDW-RSVAAGDEHTIA 341
Query: 108 LTS 110
L +
Sbjct: 342 LKT 344
>gi|326427987|gb|EGD73557.1| hypothetical protein PTSG_05264 [Salpingoeca sp. ATCC 50818]
Length = 441
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFG--HEDAAFVPTLNPYLDDHVRC---IALGG 102
+CG HS ++ +G +W WG+G G+LG G H++ PT P C IA GG
Sbjct: 252 ACGKTHSMVLDTHGDVWAWGRGGFGQLGHGSIHDE----PTPRPVEALQGMCMSMIAAGG 307
Query: 103 VHSIALTS 110
HS+ L+S
Sbjct: 308 WHSLVLSS 315
>gi|444911274|ref|ZP_21231449.1| hypothetical protein D187_02793 [Cystobacter fuscus DSM 2262]
gi|444718032|gb|ELW58848.1| hypothetical protein D187_02793 [Cystobacter fuscus DSM 2262]
Length = 496
Score = 39.3 bits (90), Expect = 0.52, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 36 ANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
A SV F N + G H G V +G L+ WG+ + G+LG G + P L D V
Sbjct: 119 ATSSVGFTFGNQTGAGALHGGAVRDGVLYSWGRNNRGQLGLGSTTNSKSPVKVEGLTD-V 177
Query: 96 RCIALGGVHSIAL 108
IA S+A+
Sbjct: 178 AAIAFAQNDSLAI 190
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S GL+HS L +G +W WG G+LG G +P P L V +A GG HS
Sbjct: 672 SVVAGLYHSLALRSDGTVWAWGDNGSGQLGDGTYFGQMLPVQVPGLSG-VVAVAAGGRHS 730
Query: 106 IAL 108
+AL
Sbjct: 731 LAL 733
>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
Length = 479
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 49 SCGLFHSGLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCG H+ + + K + WG G GRLG + VP L Y D R + VH A
Sbjct: 297 SCGNNHTVAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQAR--GVRSVHCGA 354
Query: 108 LTSLAVEECNRCLILGEEEK 127
SLAV E + G+ ++
Sbjct: 355 TYSLAVNEHGALFMFGQTKR 374
>gi|167517927|ref|XP_001743304.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778403|gb|EDQ92018.1| predicted protein [Monosiga brevicollis MX1]
Length = 850
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 51 GLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCI----ALGGVHS 105
G HS V G L+ WG+G GRLG G D VPT + +R + LG HS
Sbjct: 143 GGHHSAAVSKAGNLYTWGRGGYGRLGHGTSDDVNVPTRVAAFPEGIRVVHVACGLGDAHS 202
Query: 106 IALT 109
+ +T
Sbjct: 203 MCVT 206
>gi|426395579|ref|XP_004064048.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Gorilla gorilla gorilla]
Length = 803
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 107 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 166
Query: 105 SIALTS 110
+ +
Sbjct: 167 MVVFAA 172
>gi|224014889|ref|XP_002297106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968225|gb|EED86574.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 740
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 7/69 (10%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD------DHVRCIALG 101
SCG HS + + G L+ WG D G+ G G+E+ PT + D HV +A G
Sbjct: 309 SCGFAHSAAISSSGSLFTWGMNDDGQCGVGNEETVPRPTRVEFEDRGGRYEGHVISVACG 368
Query: 102 GVHSIALTS 110
H++ + S
Sbjct: 369 HSHTVCVLS 377
>gi|90657578|gb|ABD96878.1| hypothetical protein [Cleome spinosa]
Length = 393
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED--AAFVPT-LNPYLDDHVRCIALGGVH 104
+ G +HS L G+++ WG+G+ GRLGFG D + +P +N + + ++ GG H
Sbjct: 254 AAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTH 313
Query: 105 SIALT 109
S+ALT
Sbjct: 314 SVALT 318
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSI 106
+ G FH+ L NG LW WG + G+LG G P LD IA GG HS
Sbjct: 202 AVGAFHNLALEENGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLDSLTLVDIAAGGWHST 261
Query: 107 ALT 109
ALT
Sbjct: 262 ALT 264
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIA 107
CG F L G +W WGKGD RLG G + P + L +H V +A+G +H +A
Sbjct: 681 CGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLA 740
Query: 108 LT 109
+T
Sbjct: 741 VT 742
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 63 LWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIALT 109
+W WG GD G+LG G D VP ++ + H+ +A G S+AL+
Sbjct: 1625 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALS 1672
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSI 106
HSG L +G ++ WG G+ G+LG G A P + + + +R I+ G HS
Sbjct: 522 HSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSA 581
Query: 107 ALTS 110
A+ S
Sbjct: 582 AIGS 585
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
S G H V NG ++ WG D G++G G A +P L L H+ ++ G H++
Sbjct: 1714 SVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTV 1773
Query: 107 A 107
A
Sbjct: 1774 A 1774
>gi|8131930|gb|AAF73141.1|AF148798_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 683
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ L+ + G ++ +G G G+LG G E++ F+PTL + +L V+ ++ GG H
Sbjct: 301 ACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCH 360
Query: 105 SIALTS 110
++ +
Sbjct: 361 TLVFAT 366
Score = 38.5 bits (88), Expect = 0.94, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
NSE + N+ V ++ + SCG +HS V G+L+ +G+ + G+LG +
Sbjct: 167 NSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPN 226
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ +P P + V +A GG H++ LT AV
Sbjct: 227 QLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKAV 263
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIA 107
CG F L G +W WGKGD RLG G + P + L +H V +A+G +H +A
Sbjct: 680 CGAQFSLALSRCGLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREHKVVDVAVGALHCLA 739
Query: 108 LT 109
+T
Sbjct: 740 VT 741
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 63 LWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIALT 109
+W WG GD G+LG G D VP ++ + H+ +A G S+AL+
Sbjct: 1624 VWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALS 1671
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSI 106
HSG L +G ++ WG G+ G+LG G A P + + + +R I+ G HS
Sbjct: 521 HSGGRHAMALTYDGHVYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSA 580
Query: 107 ALTS 110
A+ S
Sbjct: 581 AIGS 584
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
S G H V NG ++ WG D G++G G A +P L L H+ ++ G H++
Sbjct: 1713 SVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCGSAHTV 1772
Query: 107 A 107
A
Sbjct: 1773 A 1773
>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
Length = 400
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVH 104
S G HS + +GKL+ WG+ G+LG G V T ++ D V+ +ALG H
Sbjct: 106 SAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEH 165
Query: 105 SIALT 109
SIA T
Sbjct: 166 SIATT 170
>gi|149921686|ref|ZP_01910134.1| regulator of chromosome condensation, RCC1 [Plesiocystis pacifica
SIR-1]
gi|149817424|gb|EDM76896.1| regulator of chromosome condensation, RCC1 [Plesiocystis pacifica
SIR-1]
Length = 549
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHE----DAAF---VPTLNPYLDDHVRCIALGGVHSIALTSLA 112
NG + WG+GD G+LG G+ D F V T+N LDD V +A GG HS AL
Sbjct: 229 NGTVRCWGQGDSGQLGLGNTNNVGDDEFPFDVITVNN-LDDGVLGMAAGGSHSCALVGAG 287
Query: 113 VEEC 116
C
Sbjct: 288 AVRC 291
>gi|392355475|ref|XP_003752052.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 608
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 339 SCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCH 398
Query: 105 SIALTS 110
+ +
Sbjct: 399 MLVFAT 404
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY----LDDHVRCIALGGV 103
SCG +HS V +G+L+ +G+ + G+LG ++ + +P + D V +A GG
Sbjct: 234 SCGYYHSAFVTTDGELYTFGEPENGKLGLPNQ--LLINHRSPQRVLGIPDKVIQVACGGG 291
Query: 104 HSIALTSLAV 113
H++ LT V
Sbjct: 292 HTVVLTEKVV 301
>gi|195390333|ref|XP_002053823.1| GJ24098 [Drosophila virilis]
gi|194151909|gb|EDW67343.1| GJ24098 [Drosophila virilis]
Length = 1962
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIAL 108
G +H+ V +GKL++WG G G+LG G + P L + + I+LG HS+ L
Sbjct: 1240 GQYHNAAVADGKLYMWGWGIYGQLGNGRCENIATPKLVSFFKYKKILQISLGHAHSLVL 1298
>gi|405960252|gb|EKC26193.1| RCC1 domain-containing protein 1 [Crassostrea gigas]
Length = 422
Score = 39.3 bits (90), Expect = 0.57, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG H+ ++ N G ++ G G G+LG GH + P L L ++C+ GG HS+
Sbjct: 165 SCGKEHALILTNSGDVYSCGGGSRGQLGLGHVETREQPCLVEDLTGVRMKCVGAGGWHSM 224
Query: 107 ALTSLA 112
A++ L
Sbjct: 225 AISELG 230
>gi|68071799|ref|XP_677813.1| CCAAT-box DNA binding protein subunit B [Plasmodium berghei strain
ANKA]
gi|56498070|emb|CAI05028.1| CCAAT-box DNA binding protein subunit B, putative [Plasmodium
berghei]
Length = 979
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 28 NSPNWNQLA-NLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
+ N N+L N SK+ SCGL H L+ N +++WG G+LG G
Sbjct: 71 DKANRNKLTINPIFSKQAIRKISCGLEHIIALMHNYNIFVWGNNKYGQLGIGDTTKEIST 130
Query: 86 TLNPYLDDHVRCIALGGVHSIALT 109
L Y ++ V IA G HSI LT
Sbjct: 131 PLLVYFNEKVIDIACGNNHSIFLT 154
>gi|443897037|dbj|GAC74379.1| hypothetical protein PANT_11d00031 [Pseudozyma antarctica T-34]
Length = 547
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 24 FNSENSPNWNQLANLSVSKRFSN----SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH 78
F S N +N + + K+ ++ S +CG HS L G +++WG G GRLG G
Sbjct: 229 FTSNNRLAFNTFSEPFLVKQLADKNITSIACGQQHSIALDDQGYVYVWGFGGYGRLGLGS 288
Query: 79 EDAAFVPTLNP 89
+ PTL P
Sbjct: 289 QQDQLTPTLVP 299
>gi|22795248|gb|AAN08220.1| putative chromosome condensation regulator [Oryza sativa Japonica
Group]
gi|108709680|gb|ABF97475.1| regulator of chromosome condensation, putative, expressed [Oryza
sativa Japonica Group]
Length = 505
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDDHV-RCIALGGV 103
SCG +H+ + NG+++ WG G G+LG D +P LD V R ++ GGV
Sbjct: 258 SCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGV 317
Query: 104 HSIALT 109
HS A+T
Sbjct: 318 HSCAVT 323
>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
Length = 1003
Score = 39.3 bits (90), Expect = 0.58, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 44 FSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
F SCG H L +NGK++ WGKG G+LG G PTL L+D
Sbjct: 506 FVKDISCGSSHVAVLTMNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALED 556
Score = 35.4 bits (80), Expect = 7.2, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVH 104
S +CG H+ +V G+++ WG+ +GGRLG D+ P ++ V+ IA G +
Sbjct: 236 SIACGEKHAAIVTKQGQVFSWGEENGGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGAKY 295
Query: 105 SIALT 109
+ A++
Sbjct: 296 TCAVS 300
>gi|118375248|ref|XP_001020809.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila]
gi|89302576|gb|EAS00564.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila
SB210]
Length = 4058
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIALGGVHS 105
SCG H V ++GKL+ WG+G G+LG + +PT + + V ++ GG H+
Sbjct: 321 SCGANHCAAVSLSGKLYTWGQGIQGQLGHQNVMNLSIPTAVKSELQEKKVVYVSCGGAHT 380
Query: 106 IALTSLAV-----EECNRCLILGEEEKRRL 130
+ LT+ N L LG++E+R +
Sbjct: 381 VCLTNEGYAYSFGNNKNGQLGLGDQEQRNV 410
>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1089
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 50 CGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCI--ALGGVHSI 106
CGL H+ L G ++ WG+ G+LG G + P+L +CI A GG H+I
Sbjct: 215 CGLQHTVALTAAGGVYCWGENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTI 274
Query: 107 ALT 109
A+T
Sbjct: 275 AVT 277
>gi|26454854|gb|AAH40929.1| HERC1 protein, partial [Homo sapiens]
Length = 651
Score = 38.9 bits (89), Expect = 0.61, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 95 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 153
>gi|343425648|emb|CBQ69182.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 544
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 24 FNSENSPNWNQLANLSVSKRFSNSS----SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH 78
F + N +N ++ + K+ ++ + +CG H+ L G +++WG G GRLG G
Sbjct: 226 FTTSNRLAFNTFSDPFLVKQLADKTIVQIACGQQHTIALDDQGFVYVWGFGGYGRLGLGS 285
Query: 79 EDAAFVPTLNP 89
+ VPTL P
Sbjct: 286 QQDQLVPTLVP 296
>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
Length = 1046
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 13/79 (16%)
Query: 47 SSSCGLFHSGLVV------------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDD 93
S++CG +H+ +V +GKL+ WG GD GRLG VPT + +D
Sbjct: 467 SAACGSWHTAAIVEVMFDRFRYNSASGKLFTWGDGDEGRLGHVDNGNKIVPTRVTQLVDY 526
Query: 94 HVRCIALGGVHSIALTSLA 112
++ G + ++ALT++
Sbjct: 527 DFVQVSCGRMLTVALTNMG 545
>gi|296813641|ref|XP_002847158.1| BTB domain and ankyrin repeat protein [Arthroderma otae CBS 113480]
gi|238842414|gb|EEQ32076.1| BTB domain and ankyrin repeat protein [Arthroderma otae CBS 113480]
Length = 1616
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 63 LWIWGKGDGGRLGFGHEDAAFVPTL---NPYLDDHVRCIALGGVHSIALT 109
L++ G G GGRLG GHE +F P H+ IALG H+IA++
Sbjct: 330 LYMCGFGPGGRLGTGHEGTSFSPQCVDSGAIAGKHIASIALGLDHTIAIS 379
>gi|260792916|ref|XP_002591460.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
gi|229276665|gb|EEN47471.1| hypothetical protein BRAFLDRAFT_205444 [Branchiostoma floridae]
Length = 689
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG H V N +++ WG+GD GRLG G+ ++ P P H V+ + G SI
Sbjct: 457 SCGATHVMAVTNEHEVFSWGRGDHGRLGLGNRESYSTPQPVPIPSPHLVKSVHCGVDCSI 516
Query: 107 ALTSLAVEECNRCLILGEEEKRRL 130
LT+ NR L G +L
Sbjct: 517 LLTT-----DNRLLGCGSNRHNKL 535
>gi|307186651|gb|EFN72134.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 815
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 49 SCGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG+ F L +GKL+ WG G+LG E+ + P L L++ H+ I G HS+
Sbjct: 475 ACGMSFVMALTNDGKLYSWGTNTYGQLGISSENDLY-PCLITSLENVHIDKIVCGSEHSL 533
Query: 107 ALTS 110
ALTS
Sbjct: 534 ALTS 537
>gi|223973351|gb|ACN30863.1| unknown [Zea mays]
Length = 408
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 43 RFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALG 101
R S + G L +G+++ WG+G G+LG G+ D P L +L++H V C++ G
Sbjct: 61 RVSFVAGGGAHAIALTSDGEVFTWGRGTHGQLGHGNLDNMPHPKLVKFLENHTVTCVSAG 120
Query: 102 GVHS 105
HS
Sbjct: 121 WNHS 124
>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 401
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFG--HEDAAFVPTLNPYLDDHVRC--IALGGV 103
+CG +H+G + NG+L++WG + G LGFG H++A +P L + +R + G
Sbjct: 270 ACGGYHTGAISRNGQLYMWGSNEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWK 329
Query: 104 HSIALT 109
H++ALT
Sbjct: 330 HTMALT 335
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHE--DAAFVPTLNPYLDD-HVRCIALGGVH 104
+ G +HS + +G+L++WGK G+LG G + +A VP+ L+ ++ +ALG H
Sbjct: 124 AAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEH 183
Query: 105 SIALT 109
S+A T
Sbjct: 184 SVAAT 188
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
+WG GD GRLG G ++ + P + D H + IA GG H++ LT
Sbjct: 37 LWGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLT 82
>gi|134297316|ref|YP_001121051.1| alpha-tubulin suppressor-like protein [Burkholderia vietnamiensis
G4]
gi|134140473|gb|ABO56216.1| Alpha-tubulin suppressor and related RCC1 domain-containing
proteins-like protein [Burkholderia vietnamiensis G4]
Length = 558
Score = 38.9 bits (89), Expect = 0.63, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPY-LDDHVRCIAL-GGVHSIALTSLAVEECNR 118
G++++WG G LG GH PTL P+ LD +R + L GG H+ S V+ +
Sbjct: 238 GRVYVWGNNRYGSLGLGHSTTVSTPTLVPFTLDTPIREVFLSGGFHA---ASYLVDTQGK 294
Query: 119 CLILGE 124
+ GE
Sbjct: 295 LWVAGE 300
>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
Length = 2770
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S S G HS L +G WIWG G+LG + VP P L V I+ G HS
Sbjct: 474 SISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLVPVQVPGLSG-VSAISAGNYHS 532
Query: 106 IALTS 110
+AL S
Sbjct: 533 MALKS 537
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 46 NSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVH 104
+S G HS L +G +W WG G+LG G VP L+D V I+ G H
Sbjct: 739 SSVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQRLVPVQVSGLED-VIAISAGDYH 797
Query: 105 SIALTS 110
S+ + S
Sbjct: 798 SMVIKS 803
>gi|348567198|ref|XP_003469388.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cavia porcellus]
Length = 780
Score = 38.9 bits (89), Expect = 0.64, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLV-VNGKLWIWGKGDG 71
RLF NSE N + ++ V + + SCG +HS V ++G+L+ +G+ +
Sbjct: 160 RLFMWGDNSEGQIGLNDVISVCVPHQVNIGKPISWISCGYYHSAFVTMDGELYTFGEPES 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG E P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPKELLINHRTPQLVAGIPEKVIQVACGGGHTVVLTEKAV 263
>gi|222625331|gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japonica Group]
Length = 581
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDDHV-RCIALGGV 103
SCG +H+ + NG+++ WG G G+LG D +P LD V R ++ GGV
Sbjct: 334 SCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGV 393
Query: 104 HSIALT 109
HS A+T
Sbjct: 394 HSCAVT 399
>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 530
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGL-VVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S +CG++H+ + V +G L+ +GK D G+LG ++ F P + V +A G H+
Sbjct: 217 SVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGESRFTPVQHRACTSVVEQLACGYYHT 276
Query: 106 IALT 109
+AL+
Sbjct: 277 VALS 280
>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
distachyon]
Length = 1023
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 39 SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVR 96
++ F S G H L + G+++ WGKG G+LG G D PTL L HV+
Sbjct: 531 TLKNEFVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHVQ 590
Query: 97 CIALGGVHSIAL 108
IA G S A+
Sbjct: 591 SIACGSNFSAAV 602
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 18/82 (21%)
Query: 47 SSSCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT----LNPYL 91
S +CG +H+ VV +GKL+ WG D G+LG + VPT L Y
Sbjct: 425 SVACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYD 484
Query: 92 DDHVRCIALGGVHSIALTSLAV 113
V C G ++ LTS V
Sbjct: 485 FLQVSC---GAALTVVLTSTGV 503
>gi|320163137|gb|EFW40036.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 2579
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG FH+ + + G++W G G G+LG G A +P LD+ + +A G HS+
Sbjct: 1592 ACGYFHTLFLTDKGEVWACGWGAQGQLGVGSTSNALLPVHVKILDNKGIVGLAAGFCHSV 1651
Query: 107 ALT 109
LT
Sbjct: 1652 VLT 1654
>gi|218780737|ref|YP_002432055.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762121|gb|ACL04587.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 2130
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
+G LW WG +GG+LG G ++ P + D+ C A G VH AL +
Sbjct: 1432 DGSLWAWGLNNGGQLGLGSKENQSAP-VQVGTDNDWLCAAAGSVHGAALKT 1481
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIA 99
+CG HS + VNG L+ WG D G+LG G + +P PY+++ + A
Sbjct: 1481 ACGSNHSLAITVNGLLFTWGCNDNGQLGQGDLRSRVIPDHVPYIENCINVFA 1532
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Query: 44 FSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALG 101
F + G HS L G +W WG G GRLG G + P L D + V I+ G
Sbjct: 1181 FISKCCAGSRHSMALDKEGNVWSWGYGGNGRLGLGSTRNYYTPNLIRIFDTYEVFQISCG 1240
Query: 102 GVHSIAL 108
HS L
Sbjct: 1241 DSHSACL 1247
>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
[Equus caballus]
Length = 966
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
S G HS L ++ ++ WG+ D G+LG GH + P+L LD+ V +A GG H+
Sbjct: 141 SAGEAHSMALSMSRNVYSWGRNDCGQLGLGHTNNKDSPSLIEALDNQEVEFLACGGSHTA 200
Query: 107 ALT 109
LT
Sbjct: 201 LLT 203
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G F T P + +H+ + L G
Sbjct: 88 TCGDYHSLALSKGGELFAWGQNTYGQLGVGR---TFASTPTPQIVEHLSGVPLVQISAGE 144
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 145 AHSMALS 151
>gi|195449339|ref|XP_002072031.1| GK22629 [Drosophila willistoni]
gi|194168116|gb|EDW83017.1| GK22629 [Drosophila willistoni]
Length = 1990
Score = 38.9 bits (89), Expect = 0.67, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIALT 109
G +H+ V +G L++WG G G+LG G + P L N + + I+LG HS+ L
Sbjct: 1262 GQYHNAAVADGHLYMWGWGVYGQLGQGSCENIPTPKLVNFFKYKKILQISLGHAHSLVLC 1321
Query: 110 ------SLAVEECNRCLILG 123
+ A + CN + G
Sbjct: 1322 QASNSYTEADQSCNELFVFG 1341
>gi|221504892|gb|EEE30557.1| UVb-resistance protein uvr8, putative [Toxoplasma gondii VEG]
Length = 1156
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 48 SSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVH 104
++ G HS L +G+ W +G GDGG LG G + DAA P +DD V +A G H
Sbjct: 390 ATSGAMHSAVLTADGRCWTFGCGDGGALGRGDDLGDAALSPA-TVSIDD-VTAVACGDSH 447
Query: 105 SIALT 109
+ LT
Sbjct: 448 TAFLT 452
>gi|171847108|gb|AAI62028.1| Rpgr protein [Rattus norvegicus]
Length = 677
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 339 SCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCH 398
Query: 105 SIALTS 110
+ +
Sbjct: 399 MLVFAT 404
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY----LDDHVRCIALGGV 103
SCG +HS V +G+L+ +G+ + G+LG ++ + +P + D V +A GG
Sbjct: 234 SCGYYHSAFVTTDGELYTFGEPENGKLGLPNQ--LLINHRSPQRVLGIPDKVIQVACGGG 291
Query: 104 HSIALTSLAV 113
H++ LT V
Sbjct: 292 HTVVLTEKVV 301
>gi|237843659|ref|XP_002371127.1| regulator of chromosome condensation, putative [Toxoplasma gondii
ME49]
gi|148357842|gb|ABQ59247.1| regulator of chromosome condensation 1 [Toxoplasma gondii]
gi|211968791|gb|EEB03987.1| regulator of chromosome condensation, putative [Toxoplasma gondii
ME49]
Length = 1155
Score = 38.9 bits (89), Expect = 0.68, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Query: 48 SSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVH 104
++ G HS L +G+ W +G GDGG LG G + DAA P +DD V +A G H
Sbjct: 390 ATSGAMHSAVLTADGRCWTFGCGDGGALGRGDDLGDAALSPA-TVSIDD-VTAVACGDSH 447
Query: 105 SIALT 109
+ LT
Sbjct: 448 TAFLT 452
>gi|401404846|ref|XP_003881873.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325116287|emb|CBZ51840.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 2752
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLN 88
SCG FH+ + + G+LW WG G++G G A VP N
Sbjct: 2029 SCGFFHNAAIDIAGRLWTWGTNTEGQIGAGFHHYADVPRGN 2069
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVH 104
S G HS + +GKL+ WG+ G+LG G V T ++ D V+ +ALG H
Sbjct: 131 SAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEH 190
Query: 105 SIALT 109
SIA T
Sbjct: 191 SIATT 195
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R +A G HS
Sbjct: 1925 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIRDVACGSSHSA 1984
Query: 107 ALTS 110
A++S
Sbjct: 1985 AISS 1988
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L G+++ WG+G+ G+LG G+ + P L +L+ +V IA G HS A+T+
Sbjct: 3078 ALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVADIACGSAHSAAITA 3133
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 2084 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 2143
Query: 108 LT 109
+T
Sbjct: 2144 VT 2145
>gi|170051508|ref|XP_001861795.1| secretion-regulating guanine nucleotide exchange factor [Culex
quinquefasciatus]
gi|167872732|gb|EDS36115.1| secretion-regulating guanine nucleotide exchange factor [Culex
quinquefasciatus]
Length = 352
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 15 AEEALVVRLFNSE----NSPNWNQLAN---LSVSKRFSNSSSCGLFHSG-LVVNGKLWIW 66
E LVVRL N + Q AN L+V KR G HSG L G++++W
Sbjct: 197 GENHLVVRLENGSIVCIGDNKFRQSANGADLNVCKREIVKLDSGWSHSGYLTKGGQVYLW 256
Query: 67 GKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVE 114
G+ + G+LG G E L+ L+ +V LG H +ALT+ A +
Sbjct: 257 GRNNYGQLGCGAEPGDEPALLD--LESNVTEFCLGSQHGLALTAAATD 302
>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
Length = 710
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG H+ LV NG+L+ +G D G+LG GH A P+ L + + +A G H++
Sbjct: 41 ACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACGRSHTL 100
Query: 107 ALT 109
T
Sbjct: 101 IAT 103
>gi|115609688|ref|XP_784766.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Strongylocentrotus purpuratus]
Length = 1035
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 35/96 (36%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAA----------FVPTLNPYLDDH- 94
S CG H L +G+++ WG+ D G+LG + F P L L ++
Sbjct: 79 SVCCGRHHFLALSADGRVYSWGRNDVGQLGIRKKKQRYDNQSQITQDFTPRLIEELSNYD 138
Query: 95 VRCIALGGVHSIALT---SLAVEECNRCLILGEEEK 127
V IA G VHSIALT L CNR LG E K
Sbjct: 139 VIQIACGDVHSIALTLDGRLFSWGCNRHGQLGVETK 174
>gi|355694504|gb|AER99691.1| hect domain and RLD 6 [Mustela putorius furo]
Length = 1014
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDD-HVRCIALGGVHS 105
SCG HS L +G+L+ WG G+LG G E + P +LD + +A GG HS
Sbjct: 134 SCGHHHSLALSEDGRLFTWGSNSHGQLGLGKECPSQASPQRVQFLDGIPLTQVAAGGAHS 193
Query: 106 IALT 109
AL+
Sbjct: 194 FALS 197
>gi|346327098|gb|EGX96694.1| Ran exchange factor Prp20/Pim1, putative [Cordyceps militaris CM01]
Length = 628
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 9/54 (16%)
Query: 66 WGKGDGGRLGFGHEDA-AFVPTLNPYLD--------DHVRCIALGGVHSIALTS 110
+G GD G LG G A P +NPYLD V +A GG+H++ LTS
Sbjct: 204 FGNGDMGELGLGPSTTEALTPCVNPYLDASSGSSPKPRVVQVACGGMHTVVLTS 257
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYL 91
LA LSV + CG H+ +++N GK++ G G G+LGFG ++ ++P L
Sbjct: 199 LAGLSV-----KNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQGSLT 253
Query: 92 DDHVRCIALGGVHSIALTS 110
+ ++ ++LG HS +T+
Sbjct: 254 NKSIKEVSLGYQHSAVITT 272
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG FH+ + + K + WG G GRLG G + + P L L V+ I GG H+
Sbjct: 156 SCGSFHTACLTDLNKAYTWGLGMQGRLGHGDTNDVYTPKLIESLAGLSVKNIVCGGHHTA 215
Query: 107 AL 108
L
Sbjct: 216 IL 217
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 38.9 bits (89), Expect = 0.72, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT--LNPYLDDHVRCIALGGVHS 105
+CG+ H+ L NG+L+ WG G+LG G + + ++ ++ + IA GG HS
Sbjct: 170 ACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFISAFIGIPIAFIACGGYHS 229
Query: 106 IALT 109
IA++
Sbjct: 230 IAIS 233
>gi|8131932|gb|AAF73142.1|AF148799_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 416
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ L+ + G ++ +G G G+LG G E++ F+PTL + +L V+ ++ GG H
Sbjct: 301 ACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCH 360
Query: 105 SIALTS 110
++ +
Sbjct: 361 TLVFAT 366
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
NSE + N+ V ++ + SCG +HS V G+L+ +G+ + G+LG +
Sbjct: 167 NSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPN 226
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ +P P + V +A GG H++ LT AV
Sbjct: 227 QLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKAV 263
>gi|50978834|ref|NP_001003126.1| X-linked retinitis pigmentosa GTPase regulator [Canis lupus
familiaris]
gi|23396836|sp|Q9N1T2.1|RPGR_CANFA RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|8131936|gb|AAF73144.1|AF148801_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 1003
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ L+ + G ++ +G G G+LG G E++ F+PTL + +L V+ ++ GG H
Sbjct: 301 ACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCH 360
Query: 105 SIALTS 110
++ +
Sbjct: 361 TLVFAT 366
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
NSE + N+ V ++ + SCG +HS V G+L+ +G+ + G+LG +
Sbjct: 167 NSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPN 226
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ +P P + V +A GG H++ LT AV
Sbjct: 227 QLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKAV 263
>gi|356526548|ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 474
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
SCG +H+ + + G+++ WG G+ G+LG + D +P LD ++ +A GGV
Sbjct: 232 SCGEYHTAAISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGV 291
Query: 104 HSIALT 109
H+ ALT
Sbjct: 292 HTCALT 297
>gi|348563524|ref|XP_003467557.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Cavia
porcellus]
Length = 1016
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--------IA 99
SCG +HS L +G+++ WGK G+LG G E F +P VR +A
Sbjct: 140 SCGYYHSLALSKDGQVFSWGKNSHGQLGLGQE---FPSQASP---QRVRSLEGIPLAQVA 193
Query: 100 LGGVHSIALT 109
GG HS AL+
Sbjct: 194 AGGAHSFALS 203
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVPT-LNPYLDDHVRCIALGGVHS 105
SCG HS V + GK++ WG G G+LG G E+ F+P + + I+ G HS
Sbjct: 87 SCGKEHSLAVCHKGKVFAWGVGSDGQLGTGKFEEICFIPQKIKALTGIKIIQISCGYYHS 146
Query: 106 IALT 109
+AL+
Sbjct: 147 LALS 150
>gi|166240420|ref|XP_640165.2| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
gi|165988589|gb|EAL66176.2| ankyrin repeat-containing protein [Dictyostelium discoideum AX4]
Length = 919
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 38 LSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVR 96
L +S + S +CG HS + + G+++ WG G GRLG G+ D + VPT P L +
Sbjct: 241 LELSNKRIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGN-DFSIVPT--PTL---IS 294
Query: 97 CIALGGVHSIALTSLAVEECNRCLILG 123
I G + IA T++A C+ +ILG
Sbjct: 295 VINRFGSNEIA-TAIAA-GCDNSMILG 319
>gi|218193272|gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
Length = 555
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDDHV-RCIALGGV 103
SCG +H+ + NG+++ WG G G+LG D +P LD V R ++ GGV
Sbjct: 308 SCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRDVSCGGV 367
Query: 104 HSIALT 109
HS A+T
Sbjct: 368 HSCAVT 373
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 38.9 bits (89), Expect = 0.76, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Query: 40 VSKRFSNSSSC--GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVR 96
V R SN +S G FHS + +G +W WG+ G+LG G +P P L V
Sbjct: 394 VVTRLSNVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPGLSG-VV 452
Query: 97 CIALGGVHSIALTS 110
++ G HS AL S
Sbjct: 453 SVSASGHHSFALRS 466
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
L +G LW WG G G+LG G + P + L + V +A G HS+A S
Sbjct: 364 LRADGTLWTWGHGATGQLGHGSSERMLSPEVVTRLSN-VASVASGSFHSVAALS 416
>gi|224134180|ref|XP_002321756.1| predicted protein [Populus trichocarpa]
gi|222868752|gb|EEF05883.1| predicted protein [Populus trichocarpa]
Length = 390
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLD--DHVRCIALGGVHSIALTS 110
++W WG G G+LG G + ++P L P+L + + +A GG H IALTS
Sbjct: 15 QIWSWGAGTEGQLGTGKLEDEYLPQLLHLPFLSSAESISTLACGGAHVIALTS 67
>gi|70943631|ref|XP_741838.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520472|emb|CAH81856.1| hypothetical protein PC000034.05.0 [Plasmodium chabaudi chabaudi]
Length = 757
Score = 38.9 bits (89), Expect = 0.77, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 31 NWNQLA-NLSVSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLN 88
N N+L N SK+ SCGL H L+ N +++WG G+LG G L
Sbjct: 52 NRNKLTINPIFSKQTIRKISCGLEHIVALMHNYNVFVWGNNKYGQLGIGDTTKEISTPLL 111
Query: 89 PYLDDHVRCIALGGVHSIALT 109
Y ++ V IA G HSI LT
Sbjct: 112 VYFNEKVIDIACGNNHSIFLT 132
>gi|6755348|ref|NP_035415.1| X-linked retinitis pigmentosa GTPase regulator isoform 3 [Mus
musculus]
gi|3258647|gb|AAC40190.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 746
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 339 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 398
Query: 105 SIALTS 110
+ +
Sbjct: 399 MLVFAT 404
>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
CCMP2712]
Length = 279
Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG H L +GKLW WG+G GG G GH P P +D + ++ G HS
Sbjct: 193 ACGEHHCLALTEDGKLWGWGRGTGGCHGLGHTSEVLSPHKLPMPEDRTIVSMSCGRWHSA 252
Query: 107 ALT 109
LT
Sbjct: 253 YLT 255
>gi|8131934|gb|AAF73143.1|AF148800_1 retinitis pigmentosa GTP-ase regulator RPGR [Canis lupus
familiaris]
Length = 918
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ L+ + G ++ +G G G+LG G E++ F+PTL + +L V+ ++ GG H
Sbjct: 301 ACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCH 360
Query: 105 SIALTS 110
++ +
Sbjct: 361 TLVFAT 366
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
NSE + N+ V ++ + SCG +HS V G+L+ +G+ + G+LG +
Sbjct: 167 NSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPN 226
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ +P P + V +A GG H++ LT AV
Sbjct: 227 QLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKAV 263
>gi|357486571|ref|XP_003613573.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355514908|gb|AES96531.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 615
Score = 38.5 bits (88), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEECNRCLI 121
+LW WG G G+LG G +P V +A GG H IALTS +E+ R +
Sbjct: 212 RLWSWGAGTDGQLGTGRLQDEQIPQQLSLSLPSVSSLACGGAHVIALTSAQMEKVVRDID 271
Query: 122 L 122
L
Sbjct: 272 L 272
>gi|74140658|dbj|BAB30628.3| unnamed protein product [Mus musculus]
Length = 590
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 339 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 398
Query: 105 SIALTS 110
+ +
Sbjct: 399 MLVFAT 404
>gi|71020563|ref|XP_760512.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
gi|46100407|gb|EAK85640.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
Length = 548
Score = 38.5 bits (88), Expect = 0.78, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 24 FNSENSPNWNQLANLSVSKRFSNSS----SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH 78
F S N +N + + K+ ++ +CG H+ L G +++WG G GRLG G
Sbjct: 226 FTSSNRLAFNTFSEPFLVKQLADKKIVHIACGQQHTIALDDQGFVYVWGFGGYGRLGLGS 285
Query: 79 EDAAFVPTLNP 89
+ VPTL P
Sbjct: 286 QQDQLVPTLVP 296
>gi|295789059|ref|NP_001171423.1| X-linked retinitis pigmentosa GTPase regulator isoform 4 [Mus
musculus]
gi|74223915|dbj|BAE23845.1| unnamed protein product [Mus musculus]
Length = 651
Score = 38.5 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 244 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 303
Query: 105 SIALTS 110
+ +
Sbjct: 304 MLVFAT 309
>gi|74200231|dbj|BAE22920.1| unnamed protein product [Mus musculus]
Length = 681
Score = 38.5 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 339 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 398
Query: 105 SIALTS 110
+ +
Sbjct: 399 MLVFAT 404
>gi|295789061|ref|NP_001171424.1| X-linked retinitis pigmentosa GTPase regulator isoform 5 [Mus
musculus]
gi|26332729|dbj|BAC30082.1| unnamed protein product [Mus musculus]
Length = 557
Score = 38.5 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 339 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 398
Query: 105 SIALTS 110
+ +
Sbjct: 399 MLVFAT 404
>gi|66805251|ref|XP_636358.1| Toll-Interleukin receptor domain-containing protein [Dictyostelium
discoideum AX4]
gi|74852300|sp|Q54HT1.1|TIRA_DICDI RecName: Full=Protein tirA; AltName: Full=TIR domain-containing
protein A
gi|60464726|gb|EAL62852.1| Toll-Interleukin receptor domain-containing protein [Dictyostelium
discoideum AX4]
Length = 1336
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDA------AFVPTLNPY---LDDHVRCI 98
SCG + L+ N G+++ WGK D G+LG G+ D+ V +PY + + I
Sbjct: 451 SCGKDFNVLLTNEGQVFSWGKNDQGQLGLGNSDSKENYEIKLVNFDDPYDSNSNKFISFI 510
Query: 99 ALGGVHSIALTSLAVEECNRCLILG 123
+ GG HSIA+ S + + N C + G
Sbjct: 511 SCGGNHSIAIESNSSTDGN-CRLYG 534
>gi|354465912|ref|XP_003495420.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Cricetulus griseus]
Length = 1136
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 339 SCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFTVQLIACGGCH 398
Query: 105 SIALTS 110
+ +
Sbjct: 399 MLVFAT 404
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY----LDDHVRCIALGGV 103
SCG +HS V V+G+L+ +G+ + G+LG ++ + +P + + V +A GG
Sbjct: 234 SCGYYHSAFVTVDGELYTFGEPENGKLGLPNQ--LLINHRSPQRVLGIPEKVIQVACGGG 291
Query: 104 HSIALTSLAV 113
H++ LT V
Sbjct: 292 HTVVLTDKVV 301
>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
Length = 393
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V G ++WG G +LGFG ++ PT+ P L +A G +HS+A
Sbjct: 207 SAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGPTVLPPLKGSTAAVACGSLHSLA 266
Query: 108 L 108
L
Sbjct: 267 L 267
>gi|301109553|ref|XP_002903857.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262096860|gb|EEY54912.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1598
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG H+ +V NG L+ +G G+ GRLG G ++ P+ +D ++ +A G H++
Sbjct: 1311 SCGREHTMVVTGNGDLYGFGWGEAGRLGTGETGSSLYPS---RVDLRNIAAVACGREHTL 1367
Query: 107 ALTS 110
ALTS
Sbjct: 1368 ALTS 1371
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG H+ L G+++ +G G GGRLG G E +P L L+++ + IA G HS
Sbjct: 1360 ACGREHTLALTSKGRVFAFGAGFGGRLGNGSETDEELPFLVEGLEEYSIVAIAAGECHSC 1419
Query: 107 ALT 109
AL+
Sbjct: 1420 ALS 1422
>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 566
Score = 38.5 bits (88), Expect = 0.81, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
++W WG G G+LG G E+ VP L+ ++ +A G H+ ALTS
Sbjct: 360 RMWTWGDGASGQLGHGTEEEELVPRQVMALEQVNIIAVAAGKAHTAALTS 409
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 48 SSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP 85
++CG H+ + + G+++ WG+G GG LG G E A P
Sbjct: 234 AACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACSTP 272
>gi|401405471|ref|XP_003882185.1| regulator of chromosome condensation domain-containing protein
[Neospora caninum Liverpool]
gi|325116600|emb|CBZ52153.1| regulator of chromosome condensation domain-containing protein
[Neospora caninum Liverpool]
Length = 1733
Score = 38.5 bits (88), Expect = 0.82, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G+ H+ + + G + WG+ D G+LG GH D + P + L H + S+A
Sbjct: 267 AAGISHALAITDLGSTYAWGRNDSGQLGLGHTDDRWTPQVVCELSGHKTIMVAAHTASVA 326
Query: 108 LT 109
LT
Sbjct: 327 LT 328
>gi|71027837|ref|XP_763562.1| hypothetical protein [Theileria parva strain Muguga]
gi|68350515|gb|EAN31279.1| hypothetical protein TP03_0534 [Theileria parva]
Length = 1060
Score = 38.5 bits (88), Expect = 0.83, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 50 CGLFHSGLVVN--GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
C + H ++ + G LW++G G+LG G + V T V +ALG +HS+A
Sbjct: 593 CSVSHENMMKDEYGTLWVFGSSTCGKLGLGENMTSAVMTPREVNITGVHSVALGPMHSLA 652
Query: 108 LTS 110
LTS
Sbjct: 653 LTS 655
>gi|392343043|ref|XP_003754780.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Rattus
norvegicus]
Length = 1035
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 339 SCGENHTALMTDIGLMYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLKFTVQLIACGGCH 398
Query: 105 SIALTS 110
+ +
Sbjct: 399 MLVFAT 404
Score = 35.4 bits (80), Expect = 8.0, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY----LDDHVRCIALGGV 103
SCG +HS V +G+L+ +G+ + G+LG ++ + +P + D V +A GG
Sbjct: 234 SCGYYHSAFVTTDGELYTFGEPENGKLGLPNQ--LLINHRSPQRVLGIPDKVIQVACGGG 291
Query: 104 HSIALTSLAV 113
H++ LT V
Sbjct: 292 HTVVLTEKVV 301
>gi|221484712|gb|EEE23006.1| regulator of chromosome condensation, putative [Toxoplasma gondii
GT1]
Length = 1155
Score = 38.5 bits (88), Expect = 0.84, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 48 SSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVH 104
++ G HS L +G+ W +G GDGG LG G + DAA P D V +A G H
Sbjct: 389 ATSGAMHSAVLTADGRCWTFGCGDGGALGRGDDLGDAALSPAAVSI--DDVTAVACGDSH 446
Query: 105 SIALT 109
+ LT
Sbjct: 447 TAFLT 451
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
G HS L +G +W WG D G+LG G + P P L V +A GG HS+AL
Sbjct: 231 GYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGL-SQVVSVAAGGFHSLALC 289
Query: 110 S 110
+
Sbjct: 290 A 290
>gi|162450118|ref|YP_001612485.1| BNR repeat-containing protein [Sorangium cellulosum So ce56]
gi|161160700|emb|CAN92005.1| BNR repeat domain protein [Sorangium cellulosum So ce56]
Length = 1462
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
+G +W WG G+LG G A+ VP P L+ V IA G HS+A+
Sbjct: 928 DGTVWAWGNNGNGQLGVGTAKASQVPVKIPTLNG-VTAIAAGANHSLAV 975
>gi|357502467|ref|XP_003621522.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355496537|gb|AES77740.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 476
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
SCG +H+ + + G+++ WG G+ G+LG + D +P LD ++ A GGV
Sbjct: 234 SCGEYHTAAISDKGEVYTWGLGNMGQLGHTSLQYGDKELIPRRVVSLDSIFIKDAACGGV 293
Query: 104 HSIALT 109
H+ ALT
Sbjct: 294 HTCALT 299
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 38.5 bits (88), Expect = 0.86, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 1862 HSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSA 1921
Query: 107 ALTS 110
A+TS
Sbjct: 1922 AITS 1925
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2021 CGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVHVAVGALHCLA 2080
Query: 108 LT 109
+T
Sbjct: 2081 VT 2082
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 38.5 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 26 SENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
++ SP W L+ + ++ LF L +G +W WG G+LG G A P
Sbjct: 791 TQTSPRW-----LTGPECIEAVAAGALFSLALSCDGGVWAWGDNGSGQLGDGAVTARTAP 845
Query: 86 TLNPYLDDHVRCIALGGVHSIAL 108
P L HV IA G H++A+
Sbjct: 846 ARVPGL-AHVVAIAAGSDHALAV 867
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
+ G HS ++NG +W WG G+LG G + P L + V IA G HS+AL
Sbjct: 153 AAGNLHSLALINGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTE-VVAIAAGDFHSLAL 211
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ GLFHS L +G++W WG G+LG G + VP L ++ I G +S+A
Sbjct: 557 AAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRNVPGRVSGLPAGIQAIVAGPSYSVA 616
Query: 108 L 108
L
Sbjct: 617 L 617
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 55 SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
S + GK+W WG G+LG G + ++ +P P L V +A G HS+AL
Sbjct: 262 SSTTLGGKVWAWGDNTYGQLGNGGDVSSLLPLEVPGL-TQVVALASGTSHSLAL 314
>gi|380012154|ref|XP_003690152.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like,
partial [Apis florea]
Length = 647
Score = 38.5 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT----LNPYLDDHVRCIALG 101
S SCG HS ++ +G+L+++G D G+LG GH++ P+ L P HV C G
Sbjct: 29 SISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVAC---G 85
Query: 102 GVHSIALT 109
H++ T
Sbjct: 86 RAHTLICT 93
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 38.5 bits (88), Expect = 0.87, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
G HS L +G +W WG D G+LG G + P P L V +A GG HS+AL
Sbjct: 228 GYMHSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGL-SQVVSVAAGGFHSLALC 286
Query: 110 S 110
+
Sbjct: 287 A 287
>gi|355715935|gb|AES05448.1| regulator of chromosome condensation 2 [Mustela putorius furo]
Length = 426
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 86 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHT 145
Query: 106 IALTSLAVEECNRCLILGEEEKRRL 130
+ALT E L GE + +L
Sbjct: 146 LALT-----ETGSVLAFGENKMGQL 165
>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
Length = 2041
Score = 38.5 bits (88), Expect = 0.88, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
N EN QL K CG HS + N +L+ WG GD RLG G
Sbjct: 386 NKENQLLPKQLTFFDRKKIQCQYLYCGDQHSACITTNKELYTWGNGDYYRLGHGMLLDEM 445
Query: 84 VPTLNPYLDD-HVRCIALGGVHSIALTS 110
P L D +V +ALG +HS+ +T+
Sbjct: 446 EPKKIEILQDVYVLDVALGTIHSLCITN 473
Score = 37.0 bits (84), Expect = 2.5, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 38 LSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHV 95
+ +S F N + G +HS L N +++ WG + G+LG G+++ +P + D +
Sbjct: 345 IDISGLFFNEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLLPKQLTFFDRKKI 404
Query: 96 RCIAL--GGVHSIALTS 110
+C L G HS +T+
Sbjct: 405 QCQYLYCGDQHSACITT 421
>gi|301777289|ref|XP_002924055.1| PREDICTED: protein RCC2-like [Ailuropoda melanoleuca]
Length = 447
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 80 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHT 139
Query: 106 IALTSLAVEECNRCLILGEEEKRRL 130
+ALT E L GE + +L
Sbjct: 140 LALT-----ETGSVLAFGENKMGQL 159
>gi|390360684|ref|XP_003729747.1| PREDICTED: uncharacterized protein LOC100892600 [Strongylocentrotus
purpuratus]
Length = 946
Score = 38.5 bits (88), Expect = 0.89, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP---TL-NPYLDDHVRC 97
S SCG H G+ V+G+++ WGKG GRLG G E+ P TL +P V+C
Sbjct: 185 SISCGPEHVVGVGVDGEIFAWGKGKDGRLGLGDEEDFCEPMEVTLRDPVFIQEVKC 240
>gi|405961464|gb|EKC27265.1| Serine/threonine-protein kinase Nek9 [Crassostrea gigas]
Length = 627
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 49 SCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP----TLNPYLDDHVRC 97
SCG H + L +G+++ WG G+ GRLG G ED P T +L HV C
Sbjct: 460 SCGENHVAALTKDGEVYTWGCGEFGRLGLGSEDDFSTPQKVATPGKHLFKHVVC 513
>gi|198420568|ref|XP_002123770.1| PREDICTED: similar to guanine nucleotide exchange factor p532,
partial [Ciona intestinalis]
Length = 2540
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 40 VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+++R S G HS V G+L+ WG+GD GRLG G + VP L
Sbjct: 420 LARRIVVCVSAGYRHSACVTQEGQLFTWGEGDYGRLGLGDNTSRNVPVL 468
>gi|366164990|ref|ZP_09464745.1| Ig domain-containing protein [Acetivibrio cellulolyticus CD2]
Length = 838
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALG 101
+R + S+ G + L +G +W WG+ GRLG G E+ + P L + R A
Sbjct: 231 ERVIDVSAGGGYTLALKADGTVWSWGENQNGRLGDGTEENSETPVQVKGLKEIKRIAASY 290
Query: 102 GVHSIALTS 110
G H +AL S
Sbjct: 291 GGHCLALKS 299
>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
Length = 646
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSI 106
+CG HS +V N G+L+ +G G GRLG G E F PT ++ + + +A G +HS
Sbjct: 199 ACGSQHSMIVSNYGELYTFGCGTTGRLGHGDEQPKFKPTPVSSLVGKSIVSVAAGVMHSS 258
Query: 107 ALTS 110
+ S
Sbjct: 259 CVDS 262
>gi|452825757|gb|EME32752.1| UVB-resistance protein UVR8-like / chromatin binding /
guanyl-nucleotide exchange factor isoform 2 [Galdieria
sulphuraria]
Length = 663
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAF-VPTLNPYLDDHVRC-IALGGVHSIALTSLAV 113
L + ++++WG+ + LG G P +NPYL IA GGVH +ALT V
Sbjct: 201 ALTDDDRVYVWGRNESAALGLGISGGCVHTPVMNPYLSGLCLVEIASGGVHGLALTKQGV 260
>gi|301625970|ref|XP_002942173.1| PREDICTED: protein RCC2 homolog [Xenopus (Silurana) tropicalis]
Length = 456
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 54 HSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCI-ALGGVHSIALT 109
HS L+ V GKLW WG+ D G+LG G VP L L V A G H++ALT
Sbjct: 152 HSLLITVEGKLWSWGRNDKGQLGHGDVKRIDVPKLIESLKGEVFVHGACGRNHTLALT 209
>gi|148222256|ref|NP_001090238.1| NIMA-related kinase 8 [Xenopus laevis]
gi|50417684|gb|AAH77830.1| Nek8 protein [Xenopus laevis]
Length = 658
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 49 SCGLFHSGLVVNGK-LWIWGKGDGGRLGFGHEDAAFVP 85
SCG H+ V N K ++ WG+GD GRLG G +D+ P
Sbjct: 416 SCGASHAIAVSNEKEVFSWGRGDNGRLGLGSQDSHNSP 453
>gi|125538482|gb|EAY84877.1| hypothetical protein OsI_06242 [Oryza sativa Indica Group]
Length = 445
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 48 SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHS 105
S+CG+ + + +G LW+WG+ G+LG G + +AA + + + ++ G H+
Sbjct: 129 SACGVVSAAIGCDGSLWVWGRSRRGQLGLGKDIVEAAVPSRVEALANYDIVKVSFGWGHA 188
Query: 106 IALT 109
+ALT
Sbjct: 189 MALT 192
>gi|410056351|ref|XP_003954016.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like [Pan
troglodytes]
Length = 476
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 297 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 356
Query: 105 SIALTS 110
+ +
Sbjct: 357 MVIFAA 362
>gi|395541970|ref|XP_003772909.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC6 [Sarcophilus harrisii]
Length = 1032
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFG--HEDAAFVPTLNPYLDDHVRCIALGGVHS 105
SCG +HS L +GK++ WG D G+LG G A +N + +A GG HS
Sbjct: 148 SCGHYHSIALTQDGKVFSWGDNDHGQLGLGTNFPSQASPQRVNSLDGIPLAQVAAGGSHS 207
Query: 106 IALT 109
AL+
Sbjct: 208 FALS 211
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 47 SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH-EDAAFVP-TLNPYLDDHVRCIALGGV 103
S SCG HS + G+++ WG G G+LG +D +P + D + ++ G
Sbjct: 93 SVSCGKEHSLAICKTGRIYSWGSGSRGQLGIKEVKDQCSIPKNIAALSRDKIIQVSCGHY 152
Query: 104 HSIALTS 110
HSIALT
Sbjct: 153 HSIALTQ 159
>gi|326916276|ref|XP_003204435.1| PREDICTED: inhibitor of Bruton tyrosine kinase-like [Meleagris
gallopavo]
Length = 1361
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 53 FHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--IALGGVHSIALT 109
FHS + + G+++ G G GGRLG G E VP L L H +C IA H++ LT
Sbjct: 188 FHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSH-QCSQIAAAKDHTVVLT 246
>gi|290996967|ref|XP_002681053.1| hect E3 ubiquitin ligase [Naegleria gruberi]
gi|284094676|gb|EFC48309.1| hect E3 ubiquitin ligase [Naegleria gruberi]
Length = 415
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 39 SVSKRFSNSSSCGLFHSGLVV-------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPY 90
++ F + G +H+G++ + ++++WGKGD GRLG G+ ++ +PT L Y
Sbjct: 145 ALKGEFVKQVAAGQYHTGVICGEQGNSESNQVFVWGKGDWGRLGLGNSNSKPLPTPLEMY 204
Query: 91 LDD 93
+D
Sbjct: 205 EED 207
>gi|224141731|ref|XP_002324218.1| predicted protein [Populus trichocarpa]
gi|222865652|gb|EEF02783.1| predicted protein [Populus trichocarpa]
Length = 561
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 49 SCGLFHSGLVVNG--KLWIWGKGDGGRLGFGHEDAAFVPT--LNPYLDDHVRCIALGGVH 104
+CG H+ LV N KLW WG+G G LG G F P+ L P L + + V
Sbjct: 382 ACGAAHTVLVANDGYKLWSWGRGTSGVLGNGKTINCFAPSFVLWPPLTEDFKQPEPKTVG 441
Query: 105 SIALTSLAVEECNRCLILGEEEKRRLK 131
+ S AV E ++ L L EE L+
Sbjct: 442 EESNGSKAVAETDKRLSLAMEEIELLQ 468
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 46 NSSSCGLFHSGLVVNGK--LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGG 102
+S +CG H+ + N ++ WG GD GRLG G+ F+P L V+ IA G
Sbjct: 69 SSVTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGD 128
Query: 103 VHSIALTS 110
H +A+T+
Sbjct: 129 SHCLAITT 136
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVVNGKLWI-WGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
S G HS +++G L WG+G+ G+LG G + PT+ LDD + + G H+
Sbjct: 20 SAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISSVTCGADHTT 79
Query: 107 ALTS 110
AL++
Sbjct: 80 ALSN 83
Score = 35.4 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSI 106
+CG H + +G++ WG+ G+LG GH + P L + V+ +A G H+
Sbjct: 125 ACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVKMLAAGAEHTT 184
Query: 107 ALT 109
A+T
Sbjct: 185 AVT 187
>gi|159463180|ref|XP_001689820.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283808|gb|EDP09558.1| predicted protein [Chlamydomonas reinhardtii]
Length = 483
Score = 38.5 bits (88), Expect = 0.96, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--IALGGVH 104
S G HSG V G+ W WG G G+LG G + P+ L V +ALG H
Sbjct: 65 SLHAGKLHSGAVTAGEAWTWGDGKCGKLGHGSAEHTHTPSRVESLVGRVAVARLALGDHH 124
Query: 105 SIALTS 110
++ + S
Sbjct: 125 TLFVDS 130
>gi|209152366|gb|ACI33109.1| RCC2 homolog [Salmo salar]
Length = 496
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 54 HSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALT 109
HS L+ GKLW WG+ + G+LG G P L L D+ V A G H++ALT
Sbjct: 135 HSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALT 192
>gi|156338626|ref|XP_001619990.1| hypothetical protein NEMVEDRAFT_v1g3056 [Nematostella vectensis]
gi|156204179|gb|EDO27890.1| predicted protein [Nematostella vectensis]
Length = 194
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP 85
SCG H +V + G ++ WGKG GRLG G+ED VP
Sbjct: 2 SCGPHHVAVVCSEGLVFTWGKGADGRLGLGNEDDQCVP 39
>gi|295789055|ref|NP_001171421.1| X-linked retinitis pigmentosa GTPase regulator isoform 1 [Mus
musculus]
Length = 1039
Score = 38.5 bits (88), Expect = 0.97, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 339 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 398
Query: 105 SIALTS 110
+ +
Sbjct: 399 MLVFAT 404
>gi|443732025|gb|ELU16917.1| hypothetical protein CAPTEDRAFT_195148, partial [Capitella teleta]
Length = 3237
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 25 NSENSPNWNQLANLSVSK-------RFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGF 76
++E+ P+ ++++L+ + R +CGL HS ++ NG+++ +G G+LG
Sbjct: 832 SAESDPDRAKISSLAPMRLEFGRGARLVAQVACGLQHSVILTQNGEVFTFGSNQHGQLGL 891
Query: 77 GHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEECNRCLILGEEEKRRL 130
G + VP ++ HV IA G H+ +T + L G +K +L
Sbjct: 892 GDANTRGVP-CRIHIKSHVAQIAAGSNHTALMTP-----SGQILTFGSHQKGQL 939
>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Strongylocentrotus purpuratus]
Length = 782
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 52 LFHSGLVV--NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIAL 108
LF +V+ NG+L+++G D G+LG GH + P+ L V IA G VH+IAL
Sbjct: 38 LFFFDVVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKHAGVVKIACGRVHTIAL 97
Query: 109 T 109
T
Sbjct: 98 T 98
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCG HS L +G L++WG G G+LG G + +P + VR ++ G H+
Sbjct: 140 SCGTDHSAALTASGTLYMWGGGSEGQLGHGEDTEVQIPR-ELSMGVPVRMVSCGYYHTAL 198
Query: 108 LT 109
LT
Sbjct: 199 LT 200
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 53 FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALT 109
F + + ++G+++ WG+ G+LG G AF+P P ++ V+ +A G H IALT
Sbjct: 238 FSAAVSLSGRVFTWGRNKYGQLGNGEFGNAFLPQPVPGIEQAVQ-VACGDHHCIALT 293
Score = 35.4 bits (80), Expect = 8.2, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGH--EDAAFVPTLNPYLDDHVRCIALGGVHS 105
+CG H VV NG L WG + G+LG G AA L H +A G HS
Sbjct: 128 ACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHS 187
Query: 106 IALTS 110
+ALTS
Sbjct: 188 LALTS 192
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 38.5 bits (88), Expect = 0.98, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +HS L +G +W WG G+LG G + +FVP L++ V IA G HS+A
Sbjct: 600 AAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGLNN-VVAIAAGDYHSMA 658
Query: 108 L 108
L
Sbjct: 659 L 659
Score = 35.4 bits (80), Expect = 7.5, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +HS L +G +W+WG G+LG + + + VP LD+ V IA G HS+A
Sbjct: 650 AAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLKVEKLDN-VVAIAAGDTHSVA 708
Query: 108 L 108
L
Sbjct: 709 L 709
Score = 35.0 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY---LDDHVRCIALGGVH 104
+ G HS L NG +W WG G+L G E+ +F L PY D+V IA GG H
Sbjct: 348 AAGRLHSVALTKNGTIWAWGNNAFGQL--GRENNSFSLNL-PYKVKWLDNVVAIAAGGSH 404
Query: 105 SIAL 108
++A+
Sbjct: 405 TLAI 408
Score = 35.0 bits (79), Expect = 9.7, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGF--GHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S GL+HS L +G +W WG + G LG + VP L D V I+ GG HS
Sbjct: 198 SAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSD-VIAISAGGFHS 256
Query: 106 IAL 108
IAL
Sbjct: 257 IAL 259
>gi|406699214|gb|EKD02424.1| poly(a)+ RNA transport protein [Trichosporon asahii var. asahii CBS
8904]
Length = 651
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 30 PNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-- 86
P W++ A +++ S G H+ + +G ++ WG G+ G+LG G + A VPT
Sbjct: 566 PPWSEPATNPIAR-----ISAGTRHNLAVSKSGHVYAWGLGNQGQLGLGSVEEASVPTLV 620
Query: 87 ----LNPYLDDHVRCIALGGVHSIALTSLAVEE 115
L PY D V C A GG H + + EE
Sbjct: 621 RSKQLRPY--DAVDCSA-GGQHCVLIAKKRDEE 650
>gi|401888171|gb|EJT52136.1| poly(a)+ RNA transport protein [Trichosporon asahii var. asahii CBS
2479]
Length = 651
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 30 PNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-- 86
P W++ A +++ S G H+ + +G ++ WG G+ G+LG G + A VPT
Sbjct: 566 PPWSEPATNPIAR-----ISAGTRHNLAVSKSGHVYAWGLGNQGQLGLGSVEEASVPTLV 620
Query: 87 ----LNPYLDDHVRCIALGGVHSIALTSLAVEE 115
L PY D V C A GG H + + EE
Sbjct: 621 RSKQLRPY--DAVDCSA-GGQHCVLIAKKRDEE 650
>gi|384251521|gb|EIE24998.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 856
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 58 VVNGKLWIWGKGDGGRLGFGHEDA-AFVPTLNPYLDDHVRCIALGGVHSIALT 109
+V G++++ G+GD G+LG G + A A P +P V +A GG+HS+ALT
Sbjct: 144 MVAGEMFVLGEGDCGQLGKGEDVADAPRPAPSPIPGKLVVQVAAGGMHSVALT 196
>gi|359319092|ref|XP_544537.3| PREDICTED: protein RCC2 [Canis lupus familiaris]
Length = 460
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 93 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHT 152
Query: 106 IALTSLAVEECNRCLILGEEEKRRL 130
+ALT E L GE + +L
Sbjct: 153 LALT-----ETGSVLAFGENKMGQL 172
>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
Length = 1878
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 60 NGKLWIWGKGDGGRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
+G LWIWG GD G+LG G + + L + +ALG H++ALT+
Sbjct: 630 SGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNLGTPIIKVALGSSHTLALTA 682
>gi|449081281|sp|Q9R0X5.2|RPGR_MOUSE RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Short=mRpgr; Flags: Precursor
Length = 1001
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 301 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MLVFAT 366
>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
tropicalis]
gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
Length = 729
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 39 SVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDH 94
+++K+ +CG H+ ++ G L+ +G G G+LG G E+ FVP L + +L
Sbjct: 293 ALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFT 352
Query: 95 VRCIALGGVHSIALTSLAVEECNRCLILGEEEKRRL 130
V+ +A GG H + + +E + +I E ++ RL
Sbjct: 353 VQSVACGGCHMLVFATPRPQE-SEVIINDELKENRL 387
>gi|18076889|emb|CAC86115.1| retinitis pigmentosa GTPase regulator [Mus musculus]
Length = 1001
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 301 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MLVFAT 366
>gi|405964349|gb|EKC29846.1| Serine/threonine-protein kinase Nek9 [Crassostrea gigas]
Length = 580
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 49 SCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP----TLNPYLDDHVRC 97
SCG H + L +G+++ WG G+ GRLG G ED P T +L HV C
Sbjct: 206 SCGENHVAALTKDGEVYTWGCGEFGRLGLGSEDDFSTPQKVATPGKHLFKHVVC 259
>gi|392305396|emb|CCI71759.1| putative E3 ubiquitin-protein ligase HERC4 [Paenibacillus polymyxa
M1]
Length = 394
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 51 GLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G HS L+ +G +W WG G LG G++ D A VP N Y+D+ V+ + GG ++AL
Sbjct: 90 GDLHSTLLKKDGTIWSWGFASYGELGTGNKRDTARVPVKNKYIDN-VKEVRAGGQFTLAL 148
>gi|281346734|gb|EFB22318.1| hypothetical protein PANDA_013306 [Ailuropoda melanoleuca]
Length = 427
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 28/85 (32%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 60 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHT 119
Query: 106 IALTSLAVEECNRCLILGEEEKRRL 130
+ALT E L GE + +L
Sbjct: 120 LALT-----ETGSVLAFGENKMGQL 139
>gi|5824124|emb|CAB54041.1| RPGR protein [Mus musculus]
Length = 1001
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 301 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MLVFAT 366
>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
Length = 267
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLD 92
+ S+ + G HS N GKL+ WG+G G+LG G +P + + D
Sbjct: 105 IETFSIQNIIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQNEEIPKKVKEFQD 164
Query: 93 DHVRCIALGGVHSIALTS 110
V IA G H++A+ S
Sbjct: 165 IRVLEIACGDSHTMAIIS 182
>gi|295789057|ref|NP_001171422.1| X-linked retinitis pigmentosa GTPase regulator isoform 2 [Mus
musculus]
gi|26325790|dbj|BAC26649.1| unnamed protein product [Mus musculus]
Length = 972
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 339 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 398
Query: 105 SIALTS 110
+ +
Sbjct: 399 MLVFAT 404
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G HS L +G+++ +G+G+ G+LG G D P L D ++ IA G HS+A
Sbjct: 283 AAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLKD-IQAIAAGDFHSLA 341
Query: 108 LT 109
LT
Sbjct: 342 LT 343
Score = 36.6 bits (83), Expect = 3.4, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFV 84
N+E+ ++ +LS + + + L L +G ++ +G G GRLG G D+
Sbjct: 163 NTEDQSTPKKIESLSDVQAIAAGGNHSL---ALTKSGDVYSFGFGLFGRLGHGDTDSQLE 219
Query: 85 PTLNPYLDDHVRCIALGGVHSIALT 109
P L D ++ IA GG HS+ALT
Sbjct: 220 PKKIEDLSD-IQAIAAGGNHSLALT 243
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G HS L +G ++ +G G GRLG G+ D+ P L D ++ IA G HS+A
Sbjct: 84 AAGTNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSD-IQAIAAGDFHSLA 142
Query: 108 LT 109
LT
Sbjct: 143 LT 144
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 3/62 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G FHS L +G ++ +G G G LG G+ + P L D V+ IA GG HS+A
Sbjct: 134 AAGDFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQSTPKKIESLSD-VQAIAAGGNHSLA 191
Query: 108 LT 109
LT
Sbjct: 192 LT 193
>gi|351711822|gb|EHB14741.1| Protein RCC2, partial [Heterocephalus glaber]
Length = 427
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGV-HS 105
S SC + GKLW WG+ + G+LG G P L L V +A G H+
Sbjct: 60 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVLATCGRNHT 119
Query: 106 IALT 109
+ALT
Sbjct: 120 LALT 123
>gi|326913438|ref|XP_003203045.1| PREDICTED: hypothetical protein LOC100541592 [Meleagris gallopavo]
Length = 1302
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 46 NSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD--DHVRCIALGG 102
+S SCG +HS + +G+L+ +G+ + G+LG E P L + V +A GG
Sbjct: 210 SSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGG 269
Query: 103 VHSIALTSLAV 113
H++ LT V
Sbjct: 270 EHTVVLTETGV 280
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ ++ NG ++ +G G G+LG G E+ A F P L + +L V +A GG H
Sbjct: 318 TCGESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCH 377
Query: 105 SIALTSLAVEECNRCLILGEEEKR 128
+ + +E L+ E R
Sbjct: 378 MLVFATPRPKESEEILLEDLYESR 401
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT 86
SCG H+ +V NGKL+++G D G+LG G ++ PT
Sbjct: 58 SCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVHKPT 96
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +HS L +G +W WG G+LG G + +FVP L++ V IA G HS+A
Sbjct: 600 AAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGLNN-VVAIAAGDYHSMA 658
Query: 108 L 108
L
Sbjct: 659 L 659
Score = 35.4 bits (80), Expect = 7.9, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +HS L +G +W+WG G+LG + + + VP LD+ V IA G HS+A
Sbjct: 650 AAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLKVEKLDN-VVAIAAGDTHSVA 708
Query: 108 L 108
L
Sbjct: 709 L 709
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY---LDDHVRCIALGGVH 104
+ G HS L NG +W WG G+L G E+ +F L PY D+V IA GG H
Sbjct: 348 AAGRLHSVALTKNGTIWAWGNNAFGQL--GRENNSFSLNL-PYKVKWLDNVVAIATGGSH 404
Query: 105 SIAL 108
++A+
Sbjct: 405 TLAI 408
>gi|118088785|ref|XP_419865.2| PREDICTED: inhibitor of Bruton tyrosine kinase [Gallus gallus]
Length = 1357
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 53 FHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--IALGGVHSIALT 109
FHS + + G+++ G G GGRLG G E VP L L H +C IA H++ LT
Sbjct: 188 FHSVFLSHKGQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSH-QCSQIAAAKDHTVVLT 246
>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
Length = 1057
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 48 SSCGLFHSGLVV-NGKLWIWGKGDGGRLG-----FGHEDAAFVPTLNPYLDDHVRCIALG 101
++CG H+ L+ +GKL+ G D G+LG ++ F+ +L Y+ HV C G
Sbjct: 41 AACGTSHTLLLTKDGKLFSCGNNDHGQLGHDTDCLPNKRPQFISSLENYIVTHVSC---G 97
Query: 102 GVHSIALTS 110
HS+ALT+
Sbjct: 98 TTHSLALTN 106
>gi|209154482|gb|ACI33473.1| RCC2 homolog [Salmo salar]
Length = 496
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHS 105
S C + GKLW WG+ + G+LG G P L L D+ V A G H+
Sbjct: 129 SGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHT 188
Query: 106 IALT 109
+ALT
Sbjct: 189 LALT 192
>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
Length = 514
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALTS 110
L GK++ WG GD G+LG G+ PTL L V IA G +HSIA+ S
Sbjct: 226 LTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLS 280
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG HS ++ +GK++ WG G G LG G+ A +P L+ H+ +A G ++I
Sbjct: 269 ACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTI 328
Query: 107 ALT 109
A+
Sbjct: 329 AVA 331
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CG S V NGK+W WG GD RLG G+E P + ++ + V +
Sbjct: 373 ACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPR---EIQGDLKGKKIKRVVASL 429
Query: 108 LTSLAVEECNRCLILGEEE 126
+LA++E + I G +E
Sbjct: 430 FHALAIDENGQVYIWGSQE 448
>gi|357613967|gb|EHJ68816.1| putative X-linked retinitis pigmentosa GTPase regulator [Danaus
plexippus]
Length = 733
Score = 38.1 bits (87), Expect = 1.0, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS ++ G+++++G G+LG GH+D P+ +L H +A G H++
Sbjct: 61 SCGDEHSAVICEKGRVFVFGANAWGQLGLGHKDEVTRPSCVKFLKPHRATFVACGRAHTV 120
Query: 107 ALT 109
+T
Sbjct: 121 FVT 123
>gi|452825756|gb|EME32751.1| UVB-resistance protein UVR8-like / chromatin binding /
guanyl-nucleotide exchange factor isoform 1 [Galdieria
sulphuraria]
Length = 562
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAF-VPTLNPYLDDHVRC-IALGGVHSIALTSLAV 113
L + ++++WG+ + LG G P +NPYL IA GGVH +ALT V
Sbjct: 201 ALTDDDRVYVWGRNESAALGLGISGGCVHTPVMNPYLSGLCLVEIASGGVHGLALTKQGV 260
>gi|212528472|ref|XP_002144393.1| Ran exchange factor Prp20/Pim1, putative [Talaromyces marneffei
ATCC 18224]
gi|210073791|gb|EEA27878.1| Ran exchange factor Prp20/Pim1, putative [Talaromyces marneffei
ATCC 18224]
Length = 494
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 26 SENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNG-KLWIWGKGDGGRLGFGHEDAAFV 84
SE P ++ + + R +SS L + + ++++G+G G LG G ++A V
Sbjct: 14 SEVVPEPSKCLKSTTTSRSHKTSSTTLTKNKVSTTRLNVYVFGEGSAGELGLGPKNATDV 73
Query: 85 --PTLNPYLD-DHVRC--IALGGVHSIALT 109
P LN LD D V IA GG+H++ALT
Sbjct: 74 TSPRLNSLLDADEVGVVDIAAGGMHAVALT 103
>gi|348530942|ref|XP_003452969.1| PREDICTED: hypothetical protein LOC100696645 [Oreochromis
niloticus]
Length = 1384
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDHVRCIALGGVHS 105
SCG HS V V G+L+ +G+ GRLG E A VP + HV + GG H+
Sbjct: 197 SCGYKHSAFVTVYGRLYTFGESANGRLGLQKEQLANHRVPQQVQGVLGHVTRVCCGGEHT 256
Query: 106 IALT 109
+ LT
Sbjct: 257 VVLT 260
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 42 KRFSNSS----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHED--AAFVPTL-NPYLDD 93
+ F NS +CG H+ +V + G L+ +G G G+LG G E+ F PTL +L
Sbjct: 291 QHFCNSKVRHIACGENHTAVVTDSGLLYTFGDGRHGKLGLGEENFINQFSPTLCTRFLQY 350
Query: 94 HVRCIALGGVHSIALTS 110
V+ ++ GG H + L +
Sbjct: 351 AVQSVSCGGHHMLVLAT 367
>gi|310644744|ref|YP_003949503.1| copper amine oxidase domain-containing protein [Paenibacillus
polymyxa SC2]
gi|309249695|gb|ADO59262.1| Copper amine oxidase domain protein [Paenibacillus polymyxa SC2]
Length = 394
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 51 GLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G HS L+ +G +W WG G LG G++ D A VP N Y+D+ V+ + GG ++AL
Sbjct: 90 GDLHSTLLKKDGTIWSWGFASYGELGTGNKRDTAKVPVKNKYIDN-VKEVRAGGQFTLAL 148
>gi|431895049|gb|ELK04842.1| Alsin [Pteropus alecto]
Length = 1500
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 15/57 (26%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--------IALGGVHSIALTS 110
++W WGKG G+LG G +P L P V+C + GGVHS+ALT+
Sbjct: 525 EVWTWGKGKDGQLGHGD----VLPRLQPLC---VKCLDGKEVIHLEAGGVHSLALTA 574
>gi|395821141|ref|XP_003783906.1| PREDICTED: protein RCC2 [Otolemur garnettii]
Length = 522
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCI-ALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V + A G H+
Sbjct: 155 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVLAACGRNHT 214
Query: 106 IALT 109
+ALT
Sbjct: 215 LALT 218
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R +A G HS
Sbjct: 825 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSA 884
Query: 107 ALTS 110
A++S
Sbjct: 885 AISS 888
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L G+++ WG+G+ G+LG G+ + P L +L+ V IA G HS A+T+
Sbjct: 1898 ALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA 1953
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 984 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 1043
Query: 108 LT 109
+T
Sbjct: 1044 VT 1045
>gi|145334859|ref|NP_001078775.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|62320260|dbj|BAD94537.1| UVB-resistance protein UVR8 - like [Arabidopsis thaliana]
gi|332010007|gb|AED97390.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 276
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Query: 33 NQLANLSVSKRFSN------SSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
N+ LSV + S SCG F L G+LW WG LG G + P
Sbjct: 77 NEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEP 136
Query: 86 TLNPYLDD-HVRCIALGGVHSIALT 109
P L+ + IA GG HS+ALT
Sbjct: 137 MPVPSLEGVRITQIACGGYHSLALT 161
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 11 FSLMAEEALVVRLFNSENSPNWN--QLANLSVSKRFS--------NSSSCGLFHSGLVV- 59
FS++A E+ V F S++ Q A +++ + S + G +H+ V
Sbjct: 193 FSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTS 252
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTSLAVEE 115
+GKL+ WG G G+LG G+ +P L L + V+ +A G H++A+ ++E
Sbjct: 253 DGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAVIDRGLKE 309
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVVNG-KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G H+ +V G +++WG+G G+LG G + F P + V+ ++ GG HS+
Sbjct: 85 SAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHFTPQPLSF-PMPVKALSCGGSHSLF 143
Query: 108 LT 109
+T
Sbjct: 144 IT 145
>gi|332218354|ref|XP_003258323.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Nomascus
leucogenys]
Length = 1353
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 26 SENSPNWNQLANL-SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
S+NS + +L +L S S + FHS L G+++ G G GGRLG G E
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 84 VPTLNPYLDDH-VRCIALGGVHSIALT 109
VP L L+ H +A H++ LT
Sbjct: 219 VPRLVEGLNSHNCSQVAAAKDHTVVLT 245
>gi|402817405|ref|ZP_10866993.1| putative regulator of chromosome condensation RCC1 [Paenibacillus
alvei DSM 29]
gi|402504927|gb|EJW15454.1| putative regulator of chromosome condensation RCC1 [Paenibacillus
alvei DSM 29]
Length = 1314
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 63 LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
LW WGK D G+LG G + + LDD V +A+G HS+AL S
Sbjct: 788 LWAWGKNDSGQLGDGTKTSKTTAVQVVGLDD-VISVAVGSEHSLALKS 834
>gi|326436506|gb|EGD82076.1| hypothetical protein PTSG_02757 [Salpingoeca sp. ATCC 50818]
Length = 1731
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 36 ANLSVSKRFSNSSS--CGLFHSGLVVNGKLWIWGKGDGGRLGFG 77
+ L VS R + CG+ HS VV L+ WGK GGRLG G
Sbjct: 1094 SELLVSTRHPDDGKFDCGIQHSAAVVGDDLYTWGKALGGRLGQG 1137
>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
Length = 1609
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Query: 26 SENSPNWNQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFV 84
+ SP++N ++S S G H+ L G ++ WG G+LG GH +
Sbjct: 1027 TRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGIVYTWGSNTDGQLGLGHTNHVQE 1086
Query: 85 PTLNPYLD-DHVRCIALGGVHSIA 107
PTL L ++R I+ G HS A
Sbjct: 1087 PTLVESLSGKNIRQISAGRTHSAA 1110
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 5/54 (9%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVP----TLNPYLDDHVRC 97
+CG HS +V ++GKL+ +G GD GRLG G +P L Y+ V C
Sbjct: 893 ACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQVAC 946
Score = 36.6 bits (83), Expect = 3.8, Method: Composition-based stats.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 28 NSPNWNQLANLS-----VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAA 82
NS + N+L ++S + K+ + S+ L NG+++ WG GD G+LG G+ D
Sbjct: 816 NSDDSNRLTHISALQGFIVKQLATSTGSDGHAIALTENGEVFSWGDGDYGKLGHGNSDRQ 875
Query: 83 FVP-TLNPYLDDHVRCIALGGVHSIALT 109
P + V +A G HS +T
Sbjct: 876 RRPRQIEALRGQEVVQVACGFKHSAVVT 903
>gi|428178444|gb|EKX47319.1| hypothetical protein GUITHDRAFT_42892, partial [Guillardia theta
CCMP2712]
Length = 240
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD---HVRCIALGGVHSIALTS 110
NG +W WG G+ G+LG G ++ P L + D H+ ++ GG H+ A+T+
Sbjct: 168 NGTVWTWGLGEHGQLGVGSTESHLEPVLVKSMADANLHIVEVSCGGAHTAAVTN 221
>gi|130488540|ref|NP_001076272.1| Williams-Beuren syndrome chromosome region 16 [Danio rerio]
gi|126631511|gb|AAI33898.1| Si:dkeyp-36f5.3 protein [Danio rerio]
Length = 451
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 47 SSSCGLFHSGLVVNG-KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
S CGL H V +G +L++WGK G LG G D + P + HV +A G H
Sbjct: 385 SIRCGLSHFAAVTDGGELFVWGKNVRGCLGIGKHDDQYFP-WRVTVPGHVTDVACGVDHM 443
Query: 106 IAL 108
+AL
Sbjct: 444 VAL 446
>gi|328869013|gb|EGG17391.1| hypothetical protein DFA_08386 [Dictyostelium fasciculatum]
Length = 524
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CG H+ L+ NG ++ WG+G+ G+LG G ++ +P D + + L + + A
Sbjct: 273 ACGDEHTLCLLQNGAIYAWGRGEEGQLGNGVKET----RQSPIPIDSLAGLKLKSISAGA 328
Query: 108 LTSLAVEECNRCLILGEEEKRRLK 131
S A+ + C + G+ K LK
Sbjct: 329 FNSAAITDDGECYVWGQYHKSILK 352
>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 17/79 (21%)
Query: 49 SCGLFHSGLVVNG----------------KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD 92
+CG++H+ V KL+ WG GD GRLG G + VP L
Sbjct: 455 ACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALI 514
Query: 93 DHVRC-IALGGVHSIALTS 110
+ C +A G ++ALT+
Sbjct: 515 EERICQVACGNDLTVALTT 533
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G E D + ++ +V +A G H+
Sbjct: 296 ACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTC 355
Query: 107 ALT 109
A+T
Sbjct: 356 AVT 358
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 40 VSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRC 97
++ F +CG +H L +++ WGKG G+LG G + PT+ L D V+
Sbjct: 565 IANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKN 624
Query: 98 IALGGVHSIAL 108
+A G ++ +
Sbjct: 625 VACGSKFTVVI 635
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L V+GK++ WG+GD G+LG P L L +R IA G HS
Sbjct: 2299 HSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSA 2358
Query: 107 ALTS 110
A+TS
Sbjct: 2359 AVTS 2362
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIAL--GGVHSIALT 109
+ +GKL+ G G GRLG G D+ PTL + H++ +A+ GG H++AL+
Sbjct: 3228 AVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALS 3284
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 2458 CGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLA 2517
Query: 108 LT 109
+T
Sbjct: 2518 VT 2519
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALTS 110
L V G+++ WG+G+ G+LG G+ P + L V IA GG HS +TS
Sbjct: 3282 ALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTS 3337
>gi|361125476|gb|EHK97517.1| putative protein pim1 [Glarea lozoyensis 74030]
Length = 524
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 63 LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH---VRCIALGGVHSIALT 109
++++G GD LG G P LN +LD V IA+GG+H +ALT
Sbjct: 108 VYVFGSGDSAELGLGDAKNVKRPRLNKFLDAATVGVVQIAVGGMHCVALT 157
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVPT-LNPYLDDHVRCIALGGVHS 105
SCG HS V + G+++ WG G G+LG G ++ +F+PT +N + ++ G HS
Sbjct: 86 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHS 145
Query: 106 IALT 109
+AL+
Sbjct: 146 LALS 149
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNP-YLDDH-VRCIALGGVHSIALTS 110
L GK++ WG D LG + PTL P LDD V IA GG HS+ALT+
Sbjct: 94 ALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTN 150
>gi|363728661|ref|XP_416780.3| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC418578
[Gallus gallus]
Length = 1212
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 46 NSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD--DHVRCIALGG 102
+S SCG +HS + +G+L+ +G+ + G+LG E P L + V +A GG
Sbjct: 197 SSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQPVLGIMEKVNKVACGG 256
Query: 103 VHSIALTSLAV 113
H++ LT V
Sbjct: 257 EHTVVLTETGV 267
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ ++ NG ++ +G G G+LG G E+ A F P L + +L V +A GG H
Sbjct: 305 TCGESHTAVIAENGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLLVACGGCH 364
Query: 105 SIALTSLAVEECNRCLILGEEEKR 128
+ + +E L+ E R
Sbjct: 365 MLVFATPRPKESEEILLEDIYESR 388
Score = 35.0 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT 86
SCG H+ +V NGKL+++G D G+LG G ++ PT
Sbjct: 45 SCGDEHTAVVTGNGKLYMFGSNDWGQLGLGSKNTVRKPT 83
>gi|348570860|ref|XP_003471214.1| PREDICTED: protein RCC2-like [Cavia porcellus]
Length = 453
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCI-ALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V + A G H+
Sbjct: 86 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIDGLSHEVIVLAACGRNHT 145
Query: 106 IALT 109
+ALT
Sbjct: 146 LALT 149
>gi|323452281|gb|EGB08155.1| hypothetical protein AURANDRAFT_26269, partial [Aureococcus
anophagefferens]
Length = 369
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGF----GHEDAAFVPTLNP---YLDDHVRCIAL 100
+CG ++ V G L+ WG G+ GRLG GH AA V T P + VR I++
Sbjct: 59 ACGFAYTAAVSAQGALYTWGAGENGRLGLGDYTGHGAAADVLTPRPLDAFGGRAVREISV 118
Query: 101 --GGVHSIALTSLA 112
GG H++AL S A
Sbjct: 119 GPGGYHTVALVSPA 132
>gi|428167243|gb|EKX36205.1| hypothetical protein GUITHDRAFT_45118, partial [Guillardia theta
CCMP2712]
Length = 314
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 36 ANLSVSKRFSNSSSCGLFH-SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
A++ V K S SCGLFH + + GKL+ G+ D GRLG ED P Y +
Sbjct: 12 AHVQVGK--VKSVSCGLFHWAAISEEGKLFTCGRADAGRLGRSLEDVKMTPAFRSYAQE 68
>gi|384499847|gb|EIE90338.1| hypothetical protein RO3G_15049 [Rhizopus delemar RA 99-880]
Length = 283
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHED------AAFVPTLNPYLDDHVRCIAL 100
S +CG FHS +V+ G L+ +G GRLG+G + A F+ ++ +V +A
Sbjct: 195 SLACGPFHSAVVIGGDLYTFGYQKEGRLGWGEKKEDVVDLAVFLDGRGQGVEVNVIKVAC 254
Query: 101 GGVHSIAL 108
G H+I L
Sbjct: 255 GSCHTIVL 262
>gi|440577319|emb|CCI55326.1| PH01B001I13.22 [Phyllostachys edulis]
Length = 1426
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 44 FSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALG 101
F S G H L +NGK++ WGKG G+LG G PTL L+ HV IA G
Sbjct: 761 FVREISSGSSHVAVLTMNGKVFTWGKGAEGQLGLGDYVNRSSPTLVEALEGRHVESIACG 820
Query: 102 GVHSIAL 108
+ A+
Sbjct: 821 SSFTAAI 827
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVH 104
S +CG H+ ++ G+++ WGK GRLG + P + L HV+ +A G H
Sbjct: 491 SIACGENHAAIITKQGEVFSWGKESSGRLGHKVNVSLSCPKIVKTLASVHVKVVAFGSKH 550
Query: 105 SIALT 109
+ A+T
Sbjct: 551 TCAVT 555
>gi|345492280|ref|XP_001603331.2| PREDICTED: regulator of chromosome condensation-like [Nasonia
vitripennis]
Length = 423
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTL---NPYLDDHVRCIALGGVHSI--ALTSLAVE 114
+GKL+ WG G G+LG G E+ VP + D V ++ GG H+I AL S AV
Sbjct: 360 SGKLYAWGMGTSGQLGTGEEEDVEVPAIIESKQLKDVKVLRVSGGGQHTIVLALPSSAVN 419
Query: 115 E 115
E
Sbjct: 420 E 420
>gi|294462324|gb|ADE76711.1| unknown [Picea sitchensis]
Length = 390
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 44 FSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAA-FVPT-LNPYLDDHVRCIALG 101
++ ++ G + L + +++ WG+G+ GRLGFG + ++ VP ++ + + ++ G
Sbjct: 253 LADIAAGGWHSTALTTDAEVYAWGRGEHGRLGFGDDKSSKMVPQKVHLLAGETIAQVSCG 312
Query: 102 GVHSIALTS 110
G HS+A T+
Sbjct: 313 GTHSVARTA 321
>gi|348677972|gb|EGZ17789.1| hypothetical protein PHYSODRAFT_499543 [Phytophthora sojae]
Length = 1008
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 5/45 (11%)
Query: 33 NQLANL-SVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLG 75
+Q+A L SVS R +CG+ HS L +GK++ WG DGGRLG
Sbjct: 323 HQVATLRSVSVRLV---ACGVLHSLALTSDGKVYSWGCSDGGRLG 364
>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
KNP414]
Length = 404
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G HS L +GK+W WG+ + G+LG G + + +P L L++ + IA G HS+AL
Sbjct: 191 GAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLEN-IEMIAGGDNHSLAL 248
Score = 36.6 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S GL HS L +G +W WG+ G+LG G + +PT +L + V I G HS+A
Sbjct: 139 STGLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVEFLSNIV-AIEAGAEHSLA 197
Query: 108 LTS 110
L++
Sbjct: 198 LSN 200
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 55 SGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRC--IALGGVHSIAL 108
+ L +G+++ WG+G G LG D PT LDD VRC IA GG H++A+
Sbjct: 399 ASLSASGRVYTWGRGKYGALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGDHTLAI 455
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT--LNPYLDDHVRCIALGGVHS 105
+CG+ H+ L NG+L+ WG G+LG G + + ++ ++ + IA GG HS
Sbjct: 170 ACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFISAFIGIPIAFIACGGYHS 229
Query: 106 IALT 109
IA++
Sbjct: 230 IAIS 233
>gi|302799471|ref|XP_002981494.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
gi|300150660|gb|EFJ17309.1| hypothetical protein SELMODRAFT_114812 [Selaginella moellendorffii]
Length = 420
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-----DDHVRCIALGG 102
+CG +HS L +G+LW WG+ + G+LG G + T+ P VR A G
Sbjct: 58 ACGHYHSLALTQSGELWAWGRNNEGQLGRGEKSILSAATITPQRVRGMESTRVRAAAGSG 117
Query: 103 VHSIAL 108
V S+A+
Sbjct: 118 VVSMAI 123
>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 818
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
+G LW WG+ + G+LG G + + PT D + I+ G HS+A+ +
Sbjct: 239 DGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAKKISAGRRHSLAVKA 289
>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 978
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA------LT 109
L +NGK++ WGKG G+LG G PTL L+D V IA G ++A L+
Sbjct: 493 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLS 552
Query: 110 SLAVEECNRC-LILGEEEKR 128
S C+ C L G K+
Sbjct: 553 SKDQSVCSNCQLTFGFTRKK 572
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG +H+ +V +GKL+ WG D G+LG + VPT + P D
Sbjct: 370 ACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFA 429
Query: 97 CIALGGVHSIALTSLAVEECNRCLILGEEEKRRL 130
++ +I LT V +G +E RL
Sbjct: 430 QVSCAKAQTIVLTITGV-----VFTIGSKEHGRL 458
>gi|405969515|gb|EKC34483.1| Inhibitor of Bruton tyrosine kinase [Crassostrea gigas]
Length = 338
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 53 FHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL 100
+HS L V+G+++ G G GGRLG G E VP L L D V C+ +
Sbjct: 188 YHSVFLTVDGQVYTCGHGQGGRLGHGDEQTYTVPKLVETLRDQV-CVQV 235
>gi|342181807|emb|CCC91286.1| putative regulator of chromosome condensation [Trypanosoma
congolense IL3000]
Length = 581
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV------E 114
G+++ WG G GRLG G E F P L +V +A G H+ +T +
Sbjct: 13 GRVYSWGCGKNGRLGHGDEKDVFTPKEIKALKYNVADVACGSFHTCLVTKSGLAYACGDN 72
Query: 115 ECNRCLILGE 124
+ +C +LGE
Sbjct: 73 QGGQCGVLGE 82
>gi|449508251|ref|XP_004163263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Cucumis sativus]
Length = 386
Score = 37.7 bits (86), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALT 109
+WG GD GRLG G+ D+ + P D + ++ IA GG H++ LT
Sbjct: 84 VWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLT 129
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 17/94 (18%)
Query: 31 NWNQLANLSVSKRFSNSS------------SCGLFHSGLVV-NGKLWIWGKGDGGRLGFG 77
N+ QL +S KRFS S G HS +V +G+L++WG G+LG G
Sbjct: 141 NFGQLG-ISDEKRFSTEPVEVRIPKEAMHISAGYNHSCVVTADGELYMWGVNSNGQLGLG 199
Query: 78 HEDAAFV--PTLNPYLDDHV-RCIALGGVHSIAL 108
+ A V PT LD V + ALG HSIA+
Sbjct: 200 KKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAV 233
>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
Length = 495
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S C + GKLW WG+ D G+LG G P L L + V A G H+
Sbjct: 128 SGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHT 187
Query: 106 IALT 109
+ALT
Sbjct: 188 LALT 191
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG HS + + G L+ WGKG GRLG G D P + L D+
Sbjct: 72 ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDY 118
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Query: 48 SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSI 106
SS G L G ++ WG+GD G+LG G++ + P L L + IA GG HS
Sbjct: 20 SSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSA 79
Query: 107 ALTS 110
A+TS
Sbjct: 80 AITS 83
>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
Length = 976
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA------LT 109
L +NGK++ WGKG G+LG G PTL L+D V IA G ++A L+
Sbjct: 491 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLS 550
Query: 110 SLAVEECNRC-LILGEEEKR 128
S C+ C L G K+
Sbjct: 551 SKDQSVCSNCQLTFGFTRKK 570
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG +H+ +V +GKL+ WG D G+LG + VPT + P D
Sbjct: 368 ACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFA 427
Query: 97 CIALGGVHSIALTSLAVEECNRCLILGEEEKRRL 130
++ +I LT V +G +E RL
Sbjct: 428 QVSCAKAQTIVLTITGV-----VFTIGSKEHGRL 456
>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
Length = 988
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA------LT 109
L +NGK++ WGKG G+LG G PTL L+D V IA G ++A L+
Sbjct: 503 LTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDKQVHSIACGFNFTMAICLHRPLS 562
Query: 110 SLAVEECNRC-LILGEEEKR 128
S C+ C L G K+
Sbjct: 563 SKDQSVCSNCQLTFGFTRKK 582
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 17/94 (18%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG +H+ +V +GKL+ WG D G+LG + VPT + P D
Sbjct: 380 ACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLNDFDFA 439
Query: 97 CIALGGVHSIALTSLAVEECNRCLILGEEEKRRL 130
++ +I LT V +G +E RL
Sbjct: 440 QVSCAKAQTIVLTITGV-----VFTIGSKEHGRL 468
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 15/70 (21%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--------IA 99
SCG +HS L +G+++ WGK G+LG G E F +P VR +A
Sbjct: 132 SCGHYHSLALSEDGQVYSWGKNSQGQLGLGKE---FPSQASP---QRVRSLEGIPLAQVA 185
Query: 100 LGGVHSIALT 109
GG HS AL+
Sbjct: 186 AGGAHSFALS 195
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 14 MAEEALVVRLFNSENSPNWNQLANLSVSKRFSNSS-SCGLFHS-GLVVNGKLWIWGKGDG 71
+ E +++ N+ N Q +SK+ + S +CG +HS L +G+L+ +G+G+
Sbjct: 370 LGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFTFGRGNH 429
Query: 72 GRLGFGH-EDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G+LG G+ ED + D V IA G H+I L
Sbjct: 430 GQLGQGNTEDQKLPKQVASLHDKKVIGIAGGFYHTIVL 467
>gi|294874340|ref|XP_002766907.1| Secretion-regulating guanine nucleotide exchange factor, putative
[Perkinsus marinus ATCC 50983]
gi|239868282|gb|EEQ99624.1| Secretion-regulating guanine nucleotide exchange factor, putative
[Perkinsus marinus ATCC 50983]
Length = 577
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 38 LSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHV 95
LS++++ S + G H+ L GK+ WG D G+LG G E + +P T+ D ++
Sbjct: 193 LSLARKRIRSVAIGAGHALALTEGGKVMSWGLNDSGQLGTGDERSRIIPETVKLPSDVYI 252
Query: 96 RCIALGGVHSIALT 109
IA G +S+A+T
Sbjct: 253 DKIACGPDYSVAVT 266
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG HS L NG+++ WGK G+LG GH + PT+
Sbjct: 347 ACGSSHSMALTDNGQIFTWGKNTRGQLGQGHRNDQLKPTM 386
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAF-VPTLNPYLDDHVRCIALGGVHSI 106
SCG+ H+ + N G ++ WG G G+LG + + +PT ++ GG+HS+
Sbjct: 449 SCGMTHTLAITNEGFVYAWGDGMSGKLGVQENNKSLHLPTR----------VSAGGLHSM 498
Query: 107 ALTSLAV 113
ALT +
Sbjct: 499 ALTDQGI 505
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 53 FHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
+HS L +G +W WG G+LG G + P P L V IA G VHS+AL
Sbjct: 603 YHSLALKQDGTVWTWGYNSSGQLGDGTTASRLTPAQVPGLTG-VSAIAAGLVHSLAL 658
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ GL HS L +G +W WG+ G+LG G + VP L V IA G HS+A
Sbjct: 649 AAGLVHSLALKQDGTVWAWGRNTDGQLGNGAAVNSPVPVQVQGLTG-VSAIAAGSYHSLA 707
Query: 108 L 108
L
Sbjct: 708 L 708
>gi|297305171|ref|XP_001103994.2| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like,
partial [Macaca mulatta]
Length = 744
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F PTL + +L V+ +A GG H
Sbjct: 136 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFTPTLCSNFLRFIVKLVACGGCH 195
Query: 105 SIALTS 110
+ +
Sbjct: 196 MVVFAA 201
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHS 105
SCG H+ +V +G+L+++G+ + G+LG ++ P L + + V +A GG H+
Sbjct: 31 SCGDEHTAIVTTDGELYMFGEPENGKLGLPNQLLSNHRTPQLVSEIPEKVIQVACGGEHT 90
Query: 106 IALTSLAV 113
+ LT AV
Sbjct: 91 VVLTENAV 98
>gi|197121464|ref|YP_002133415.1| chromosome condensation regulator RCC1 [Anaeromyxobacter sp. K]
gi|196171313|gb|ACG72286.1| regulator of chromosome condensation RCC1 [Anaeromyxobacter sp. K]
Length = 714
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +H+ V +G W WG G+LG G + PT L V IA GG H++A
Sbjct: 196 AVGDWHAAAVKADGSAWTWGSNASGQLGDGTIASTPRPTPAQVLPAEVMEIAAGGAHTVA 255
Query: 108 LTS 110
L S
Sbjct: 256 LRS 258
>gi|328783019|ref|XP_395630.4| PREDICTED: hypothetical protein LOC412167, partial [Apis mellifera]
Length = 854
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT----LNPYLDDHVRCIALG 101
S SCG HS ++ +G+L+++G D G+LG GH++ P+ L P HV C G
Sbjct: 103 SISCGDEHSAVICQSGRLFVFGSNDWGQLGLGHKNHISKPSCVKVLKPEKVTHVAC---G 159
Query: 102 GVHSIALT 109
H++ T
Sbjct: 160 RAHTLICT 167
>gi|296087557|emb|CBI34146.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
SCG F + ++ G+LW WG LG G + + P P L D + IA GG HS+
Sbjct: 151 SCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSL 210
Query: 107 ALT 109
ALT
Sbjct: 211 ALT 213
Score = 35.0 bits (79), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSI 106
+ G +HS L +GK+ WG G G+LG + +PT+ L D+HV IA GG S
Sbjct: 203 ASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGGSSSA 262
Query: 107 ALT 109
A+T
Sbjct: 263 AIT 265
>gi|301122403|ref|XP_002908928.1| sodium-coupled neutral amino acid transporter, putative
[Phytophthora infestans T30-4]
gi|262099690|gb|EEY57742.1| sodium-coupled neutral amino acid transporter, putative
[Phytophthora infestans T30-4]
Length = 592
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 61 GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
G+L+ +G GDGGRLG G D + P L L++HV
Sbjct: 48 GQLFTFGCGDGGRLGLGSNDDSCHPQLVSALENHV 82
>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
Length = 594
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 31 NWNQLANLSVSKRFSNSS-SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
N NQ ++ S R + + +CG HS +V N G+L+ +G G GRLG G E F PT+
Sbjct: 146 NRNQPTRINHSDRATFVAIACGSQHSMIVSNFGELYTFGCGTTGRLGLGDESPRFKPTV 204
>gi|300121038|emb|CBK21420.2| unnamed protein product [Blastocystis hominis]
Length = 618
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 33 NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHE----DAAFVPTL 87
++LA LS F + G HS LV NG++ WG G+LGFG + D +PT
Sbjct: 18 SKLAMLSSPCCFPIQIAAGTSHSLCLVDNGEIIAWGSNSYGQLGFGSDVEDSDPQRIPT- 76
Query: 88 NPYLDDHVRCIALGGVHSIALTS 110
+ + V IA GG H++ + S
Sbjct: 77 --FQNLPVASIACGGFHNVCICS 97
>gi|260826736|ref|XP_002608321.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
gi|229293672|gb|EEN64331.1| hypothetical protein BRAFLDRAFT_125491 [Branchiostoma floridae]
Length = 364
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 50 CGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIA 107
CG HS L ++G+++ WG G G+LG G +A+ P + L+ + IA GG HS++
Sbjct: 171 CGKEHSLALTLSGRVFSWGNGSRGQLGHGTTEASNTPQVIEALEGVTMVTIAAGGWHSVS 230
Query: 108 LTSLA 112
+++
Sbjct: 231 VSAFG 235
>gi|45552000|ref|NP_733309.3| claret [Drosophila melanogaster]
gi|45446703|gb|AAF56945.4| claret [Drosophila melanogaster]
gi|221307624|gb|ACM16688.1| FI02178p [Drosophila melanogaster]
Length = 1961
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALT 109
G +H+ V +GKL++WG G G+LG G + P L + + I+LG H++ L
Sbjct: 1233 GQYHNAAVADGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLC 1292
Query: 110 SLAVE--ECNRC 119
E N C
Sbjct: 1293 GAPNSHMEANHC 1304
>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
Length = 1711
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 34 QLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
++ LS+ + + +CG H+ + + ++ WG G+LG G D PTL L D
Sbjct: 912 RVETLSIQRVQVMAVACGQEHTLALCDNGVYAWGSSTYGQLGLGDWDRQTHPTLVTQLKD 971
Query: 94 HVRCIAL--GGVHSIAL 108
V C+A+ G HS AL
Sbjct: 972 -VFCVAVATGQYHSAAL 987
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGH--EDAAFVPTLN----PYLDDHVRCIALGG 102
SCG H L+ ++ WGK GRLG G D+ +VP + V +A G
Sbjct: 871 SCGQQHVALLTEEGVYTWGKPHQGRLGHGQLLGDSGYVPPMRVETLSIQRVQVMAVACGQ 930
Query: 103 VHSIAL 108
H++AL
Sbjct: 931 EHTLAL 936
>gi|195574859|ref|XP_002105401.1| GD21470 [Drosophila simulans]
gi|194201328|gb|EDX14904.1| GD21470 [Drosophila simulans]
Length = 1976
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALT 109
G +H+ V +GKL++WG G G+LG G + P L + + I+LG H++ L
Sbjct: 1248 GQYHNAAVADGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLC 1307
Query: 110 SLAVE--ECNRC 119
E N C
Sbjct: 1308 GAPNSHMEANHC 1319
>gi|195341309|ref|XP_002037253.1| GM12827 [Drosophila sechellia]
gi|194131369|gb|EDW53412.1| GM12827 [Drosophila sechellia]
Length = 1976
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALT 109
G +H+ V +GKL++WG G G+LG G + P L + + I+LG H++ L
Sbjct: 1248 GQYHNAAVADGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLC 1307
Query: 110 SLAVE--ECNRC 119
E N C
Sbjct: 1308 GAPNSHMEANHC 1319
>gi|40882459|gb|AAR96141.1| RH02355p [Drosophila melanogaster]
Length = 1961
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALT 109
G +H+ V +GKL++WG G G+LG G + P L + + I+LG H++ L
Sbjct: 1233 GQYHNAAVADGKLYMWGWGIYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVLC 1292
Query: 110 SLAVE--ECNRC 119
E N C
Sbjct: 1293 GAPNSHMEANHC 1304
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVPT-LNPYLDDHVRCIALGGVHS 105
SCG HS V + G+++ WG G G+LG G ++ +F+PT +N + ++ G HS
Sbjct: 237 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHS 296
Query: 106 IALT 109
+AL+
Sbjct: 297 LALS 300
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVPT-LNPYLDDHVRCIALGGVHS 105
SCG HS V + G+++ WG G G+LG G ++ +F+PT +N + ++ G HS
Sbjct: 237 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHS 296
Query: 106 IALT 109
+AL+
Sbjct: 297 LALS 300
>gi|242220699|ref|XP_002476112.1| predicted protein [Postia placenta Mad-698-R]
gi|220724665|gb|EED78692.1| predicted protein [Postia placenta Mad-698-R]
Length = 1354
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 37 NLSVSKRFS----NSSSCGLFHSGLVVN---GKLWIWGKGDGGRLGFG-HEDAAFVPTLN 88
N + RFS ++ H+ ++ + G L + G G+GGRLG G H VP
Sbjct: 199 NEHIDVRFSPIHVGDAAMSRLHTAVITSEDRGNLRVCGFGNGGRLGPGQHTQYGLVPL-- 256
Query: 89 PYLDDHVRCIALGGVHSIALT 109
P L + IALG H++ALT
Sbjct: 257 PQLSHTIVSIALGQDHTLALT 277
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDD-HVRCIALGGVHS 105
SCG +HS L +G+++ WGK + G+LG G + P LD + +A GG HS
Sbjct: 148 SCGHYHSIALAQDGRVFSWGKNNHGQLGLGENVPSQASPQWVKSLDGIPLAQVAAGGAHS 207
Query: 106 IALT 109
AL+
Sbjct: 208 FALS 211
>gi|194906066|ref|XP_001981306.1| GG11698 [Drosophila erecta]
gi|190655944|gb|EDV53176.1| GG11698 [Drosophila erecta]
Length = 1961
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIAL 108
G +H+ V +GKL++WG G G+LG G + P L + + I+LG H++ L
Sbjct: 1234 GQYHNAAVADGKLYMWGWGVYGQLGQGSCENIATPQLVSFFKFKKILQISLGHAHTLVL 1292
>gi|347971497|ref|XP_313138.5| AGAP004229-PA [Anopheles gambiae str. PEST]
gi|333468695|gb|EAA08628.5| AGAP004229-PA [Anopheles gambiae str. PEST]
Length = 2085
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
+ G +H+ +V NG L+ WG G G+LG G + P + + + + IALG H++
Sbjct: 1270 AAGQYHNAVVANGLLYTWGWGVFGQLGHGTVNDCNKPKIVEFFRNKKILQIALGHAHTMV 1329
Query: 108 L 108
L
Sbjct: 1330 L 1330
>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
Length = 727
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ ++ + G L+ +G G G+LG G E+ FVP L + +L V+ +A GG H
Sbjct: 303 TCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCH 362
Query: 105 SIALTS 110
+ +
Sbjct: 363 MLVFAT 368
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAF--VPTLNPYLDDHVRCIALGGVHS 105
SCG +HS V +G+L+ +G+ + G+LG + P L V+ ++ GG H+
Sbjct: 198 SCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHT 257
Query: 106 IALTSLAV 113
IA+T V
Sbjct: 258 IAVTEKEV 265
>gi|357483503|ref|XP_003612038.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355513373|gb|AES94996.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 442
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 50 CGLFHSGLVV-----NGKLWIWGKGDGGRLGFG-HEDAAFVPTLNPYLD-DHVRCIALGG 102
CG F SG+V +G +W+WG G+LG G H A VP+ L +V ++ G
Sbjct: 118 CGAFASGVVSCCVGDDGSVWVWGMSKRGQLGLGKHVTEAVVPSRVEALSRQNVVKVSFGW 177
Query: 103 VHSIALT 109
H++ALT
Sbjct: 178 GHALALT 184
>gi|294881725|ref|XP_002769466.1| regulator of chromosome condensation, putative [Perkinsus marinus
ATCC 50983]
gi|239872925|gb|EER02184.1| regulator of chromosome condensation, putative [Perkinsus marinus
ATCC 50983]
Length = 576
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 38 LSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHV 95
LS++++ S + G H+ L GK+ WG D G+LG G E + +P T+ D ++
Sbjct: 193 LSLARKRIRSVAIGAGHALALTEGGKVMSWGLNDSGQLGTGDERSRIIPETVKLPSDVYI 252
Query: 96 RCIALGGVHSIALT 109
IA G +S+A+T
Sbjct: 253 DKIACGPDYSVAVT 266
>gi|260814720|ref|XP_002602062.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
gi|229287367|gb|EEN58074.1| hypothetical protein BRAFLDRAFT_94436 [Branchiostoma floridae]
Length = 3971
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
+CG HS +V +GKL+ +G GD GRLG G+ +P L+ V + G H++
Sbjct: 3326 ACGFKHSAVVSADGKLFTFGNGDYGRLGLGNTSNKKIPERVTALEGQMVGQVGCGLNHTL 3385
Query: 107 ALTS 110
A+++
Sbjct: 3386 AVSA 3389
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 50 CGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSI 106
CGL H+ + +G +W +G GD G+LG G+ A P ++P V+ + G S+
Sbjct: 3379 CGLNHTLAVSADGNTVWSFGDGDYGKLGLGNSTAKSTPQRVDPLCGIGVKKVCCGTQFSV 3438
Query: 107 ALT 109
ALT
Sbjct: 3439 ALT 3441
>gi|348685617|gb|EGZ25432.1| hypothetical protein PHYSODRAFT_487209 [Phytophthora sojae]
Length = 1178
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 18/78 (23%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNP-----------------Y 90
+CG + S +V +G ++ WG+G G+LG G+ D+ V L+P
Sbjct: 466 ACGCYFSMVVTEDGSVFSWGEGSDGQLGLGYSDSFRVGFLDPNISGSNFVYIPSPTRIDA 525
Query: 91 LDDHVRCIALGGVHSIAL 108
L + + IA+GG H A+
Sbjct: 526 LKEPIESIAVGGNHVFAI 543
>gi|145505117|ref|XP_001438525.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405697|emb|CAK71128.1| unnamed protein product [Paramecium tetraurelia]
Length = 749
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 10/83 (12%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ GL+HS + K+++WG+G G+LG G + PT V C G H++
Sbjct: 96 AVGLYHSAACTKDNKIYVWGRGSEGQLGMGDTENVEKPTELSIQGQEVCC---GSFHTL- 151
Query: 108 LTSLAVEECNRCLILGEEEKRRL 130
V C ++GE + +L
Sbjct: 152 -----VRNGETCYVMGENQNGQL 169
>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
Length = 727
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ ++ + G L+ +G G G+LG G E+ FVP L + +L V+ +A GG H
Sbjct: 303 TCGENHTAVITDKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVACGGCH 362
Query: 105 SIALTS 110
+ +
Sbjct: 363 MLVFAT 368
Score = 36.2 bits (82), Expect = 3.9, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAF--VPTLNPYLDDHVRCIALGGVHS 105
SCG +HS V +G+L+ +G+ + G+LG + P L V+ ++ GG H+
Sbjct: 198 SCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHT 257
Query: 106 IALTSLAV 113
IA+T V
Sbjct: 258 IAVTEKEV 265
>gi|357466661|ref|XP_003603615.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355492663|gb|AES73866.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 563
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 49 SCGLFHSGLVVN--GKLWIWGKGDGGRLGFGHEDAAFVPTLNPY 90
+CG H+ +V K+W WG+G G LG G E ++ PT+ P+
Sbjct: 380 ACGAAHTVVVAQEGHKVWSWGRGRSGVLGNGKEMDSYTPTIVPW 423
>gi|346321525|gb|EGX91124.1| Ran exchange factor Prp20/Pim1, putative [Cordyceps militaris CM01]
Length = 544
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGF----GHEDAAFV-PTLNPYLDDHVRCIALGG 102
+CG +HS + +GK+W WG + G +G G +DA + P L+DHV GG
Sbjct: 343 ACGAYHSFAIDKDGKVWGWGLNNFGEIGVQSNAGEDDAVILKPAKLADLEDHVITDIDGG 402
Query: 103 VHSIALTSLAVEECNRCLILG 123
VH SLA E + G
Sbjct: 403 VHH----SLACSEDGKLFTWG 419
>gi|168058364|ref|XP_001781179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667416|gb|EDQ54047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 51 GLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIAL 108
G HS L G+LW+WG G GRLG G P L L++H + +A G HS+ L
Sbjct: 404 GRAHSLALTSQGQLWVWGSGKNGRLGLGSPADEPSPLLLESLENHCIAEVACGFDHSLIL 463
>gi|149033232|gb|EDL88033.1| potential ubiquitin ligase, isoform CRA_a [Rattus norvegicus]
Length = 449
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVPT-LNPYLDDHVRCIALGGVHS 105
SCG HS V + G+++ WG G G+LG G ++ +F+PT +N + ++ G HS
Sbjct: 79 SCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEISFMPTKINSLAGIKIIQVSCGHYHS 138
Query: 106 IALT 109
+AL+
Sbjct: 139 LALS 142
>gi|444918725|ref|ZP_21238787.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444709515|gb|ELW50526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 394
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 6/65 (9%)
Query: 46 NSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHS 105
NS S L SG+V W WG G+LG G +D + P L ++ IA GG HS
Sbjct: 203 NSHSLALDKSGVV-----WAWGDNTLGQLGNGTQDESTTPVKVQGLPT-IKLIAAGGAHS 256
Query: 106 IALTS 110
+AL +
Sbjct: 257 LALDT 261
>gi|354505309|ref|XP_003514713.1| PREDICTED: protein RCC2-like [Cricetulus griseus]
Length = 484
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L + + A G H+
Sbjct: 117 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHT 176
Query: 106 IALT 109
+ALT
Sbjct: 177 LALT 180
>gi|325192607|emb|CCA27034.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 362
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 66 WGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVHSIALT 109
WGKG G+LG G +D A+ PT ++P + +A G H++ LT
Sbjct: 256 WGKGSHGQLGIGLDDGAYTPTSILIDPIKHRAISQVACGSEHTLLLT 302
>gi|197117227|ref|YP_002137654.1| hypothetical protein [Geobacter bemidjiensis Bem]
gi|197086587|gb|ACH37858.1| ATS1 domain repeat lipoprotein [Geobacter bemidjiensis Bem]
Length = 454
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 13/69 (18%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP------TLNPYLD---DHVRCIA 99
+ G FHS V NG ++ WG D G++G G AF P L Y + + + +A
Sbjct: 144 AAGGFHSLGVANGSIYAWGNNDYGQVGNG----AFSPKQTTPAKLTNYTEASLNSAKAVA 199
Query: 100 LGGVHSIAL 108
GG HS AL
Sbjct: 200 AGGYHSAAL 208
>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
Length = 484
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L + + A G H+
Sbjct: 117 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHT 176
Query: 106 IALT 109
+ALT
Sbjct: 177 LALT 180
>gi|406897314|gb|EKD41308.1| regulator of chromosome condensation RCC1, partial [uncultured
bacterium]
Length = 978
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
L N +V+ ++ S G+F L +G +W WG + G+LG D + VP + ++ +
Sbjct: 686 LGNGAVTPMITSVVSAGMFSLALDSSGNVWAWGNDNNGQLGDNLSDHSEVP-VQVHIISN 744
Query: 95 VRCIALGG 102
V IA GG
Sbjct: 745 VAGIAAGG 752
>gi|392942766|ref|ZP_10308408.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Frankia
sp. QA3]
gi|392286060|gb|EIV92084.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Frankia
sp. QA3]
Length = 406
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALG 101
+G +W WG GRLG G + +P L P L D VR IA+G
Sbjct: 198 DGTVWAWGLNGDGRLGNGTTTTSLLPVLVPGLTD-VRAIAVG 238
>gi|242038901|ref|XP_002466845.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
gi|241920699|gb|EER93843.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
Length = 485
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
SCG +H+ + NG+++ WG G G+LG D +P LD VR ++ GGV
Sbjct: 233 SCGEYHTAAISENGEVYTWGLGSMGQLGHCSLQSGDNELIPRRIVALDGIVVRDVSCGGV 292
Query: 104 HSIALT 109
HS A+T
Sbjct: 293 HSCAVT 298
>gi|344268675|ref|XP_003406182.1| PREDICTED: alsin [Loxodonta africana]
Length = 1658
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTS 110
++W WGKG G+LG G P +LD V + GG HS+ALT+
Sbjct: 528 EVWTWGKGKEGQLGHGDVLPRLQPLCVKFLDGKEVIYLEAGGYHSLALTA 577
>gi|167385636|ref|XP_001737426.1| guanine nucleotide exchange factor [Entamoeba dispar SAW760]
gi|165899774|gb|EDR26295.1| guanine nucleotide exchange factor, putative [Entamoeba dispar
SAW760]
Length = 970
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
S G + ++ GKL+ WG +GG+LG P L P ++D ++ I GG H++AL
Sbjct: 108 SMGSYFCVVLSKGKLYSWGAYEGGQLGIQDVFNPSKPELVPQIND-IKDICCGGYHTLAL 166
>gi|167393607|ref|XP_001740647.1| guanine nucleotide exchange factor [Entamoeba dispar SAW760]
gi|165895160|gb|EDR22911.1| guanine nucleotide exchange factor, putative [Entamoeba dispar
SAW760]
Length = 969
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
S G + ++ GKL+ WG +GG+LG P L P ++D ++ I GG H++AL
Sbjct: 104 SMGSYFCVVLSKGKLYSWGAYEGGQLGIQDVFNPSKPELVPQIND-IKDICCGGYHTLAL 162
>gi|168018697|ref|XP_001761882.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686937|gb|EDQ73323.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 242
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCI 98
+S + + G F L G+LW WG LG G ++ P + P +++ + +
Sbjct: 56 ISDPIAAVACGGFFTMALTPGGQLWSWGGNSNYELGIGDRRPSWRPRMVPEVENTRLIQV 115
Query: 99 ALGGVHSIALT 109
A GG HS A+T
Sbjct: 116 ACGGYHSAAIT 126
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDG-GRLGF----GHEDAAFVPTLNPYLDDHVRCIALGG 102
+CG H+ V +G ++ WG+ +G GRLG+ +ED VP + D + +A GG
Sbjct: 8 ACGGAHTAAVSASGHVYTWGRDEGEGRLGYIPGPEYEDGTCVPLQVRGISDPIAAVACGG 67
Query: 103 VHSIALT 109
++ALT
Sbjct: 68 FFTMALT 74
>gi|388855483|emb|CCF50929.1| uncharacterized protein [Ustilago hordei]
Length = 546
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 5/71 (7%)
Query: 24 FNSENSPNWNQLANLSVSKRFSNSS----SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGH 78
F S N +N + + K+ ++ +CG H+ + +G +++WG G GRLG G
Sbjct: 226 FTSSNRLAFNTFSEPFLVKQLADKKITQIACGQQHTIAMDEDGYVYVWGFGGYGRLGLGS 285
Query: 79 EDAAFVPTLNP 89
+ PTL P
Sbjct: 286 QQDQLTPTLVP 296
>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
Length = 408
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSI 106
S+ C F L+ NGK++ WG+G G+LG G+ + VP L++ V I G H++
Sbjct: 189 SAGCD-FSLALLENGKVYAWGRGIHGQLGTGNRATSSVPRQVQGLENIVE-IDAGCYHAL 246
Query: 107 ALTS 110
ALT+
Sbjct: 247 ALTA 250
>gi|198415530|ref|XP_002126613.1| PREDICTED: similar to NIMA (never in mitosis gene a)-related
expressed kinase 8 [Ciona intestinalis]
Length = 720
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNP 89
+ G +H + +G+++ WGKGD GRLG E+ VP + P
Sbjct: 455 ASGSYHMLAVTSDGEVFSWGKGDNGRLGLNSEETVAVPMMVP 496
>gi|341881694|gb|EGT37629.1| CBN-GLO-4 protein [Caenorhabditis brenneri]
Length = 1384
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFG--HEDAAFVPTLNPYLDDHVRCIALGGVHS 105
+CG FHS V +G LW +G G G+LG G +P L + +A G H+
Sbjct: 826 ACGQFHSAFVCADGSLWTFGWGIWGQLGQGGRFNSNLLIPKKVNGLISKITHVACGRAHT 885
Query: 106 IALTSLAVEECNRCLILG 123
+ALT + R LI G
Sbjct: 886 VALT-----DNGRVLICG 898
Score = 36.6 bits (83), Expect = 3.5, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 12/68 (17%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHED------AAFVPTLNPYLDDHVRCIALG 101
+CGL HS L+ + G L+ WGKG +LG G+++ F PT + + ++LG
Sbjct: 1023 ACGLSHSALITSEGSLYTWGKGLDYQLGHGNKNERMEPHQVFEPTGATWTN-----VSLG 1077
Query: 102 GVHSIALT 109
H+I T
Sbjct: 1078 NNHTIGAT 1085
>gi|302808359|ref|XP_002985874.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
gi|300146381|gb|EFJ13051.1| hypothetical protein SELMODRAFT_182077 [Selaginella moellendorffii]
Length = 394
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL--DDHVRCIALGGVHS 105
+ G +HS L +G ++ WG+G+ GRLGFG + ++ + +L + V ++ GG HS
Sbjct: 259 AAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQVSCGGTHS 318
Query: 106 IALT 109
+A T
Sbjct: 319 VAAT 322
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSI 106
+ G FH+ LV +G++W WG + G+LG G P L V IA GG HS+
Sbjct: 207 AVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSM 266
Query: 107 ALT 109
ALT
Sbjct: 267 ALT 269
>gi|114608250|ref|XP_001148806.1| PREDICTED: inhibitor of Bruton tyrosine kinase isoform 3 [Pan
troglodytes]
gi|397490901|ref|XP_003816422.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Pan paniscus]
gi|410219734|gb|JAA07086.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase [Pan
troglodytes]
gi|410267108|gb|JAA21520.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase [Pan
troglodytes]
gi|410305092|gb|JAA31146.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase [Pan
troglodytes]
gi|410350273|gb|JAA41740.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase [Pan
troglodytes]
Length = 1353
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 26 SENSPNWNQLANL-SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
S+NS + +L +L S S + FHS L G+++ G G GGRLG G E
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 84 VPTLNPYLDDH-VRCIALGGVHSIALT 109
VP L L+ H +A H++ LT
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLT 245
>gi|157121561|ref|XP_001659905.1| regulator of chromosome condensation [Aedes aegypti]
gi|108874634|gb|EAT38859.1| AAEL009303-PA [Aedes aegypti]
Length = 456
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S GL HS + + L++WG G LGFGH++ F P L + V I+ G H++A
Sbjct: 392 SAGLIHSAAINDQDDLYMWGHNRYGCLGFGHKNDQFFP-LKVAVSARVMKISCGVDHTLA 450
Query: 108 L 108
L
Sbjct: 451 L 451
>gi|397609435|gb|EJK60365.1| hypothetical protein THAOC_19295 [Thalassiosira oceanica]
Length = 1106
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGH--EDAAFVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ + G+L++WG DGGRLG G ++ + P L + + V ++ G
Sbjct: 618 SCGNSHTACIGQEGQLYVWGDPDGGRLGLGEDVDNVQYSPVLVDSLAKERVVDVSCGCHQ 677
Query: 105 SIALTS 110
++ LT+
Sbjct: 678 TLVLTA 683
>gi|296090337|emb|CBI40156.3| unnamed protein product [Vitis vinifera]
Length = 905
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G + P L L + ++ +A G HS
Sbjct: 311 ACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSDVSHPKLIDALKNMNIELVACGEYHSC 370
Query: 107 ALT 109
A+T
Sbjct: 371 AVT 373
>gi|348680641|gb|EGZ20457.1| hypothetical protein PHYSODRAFT_442857 [Phytophthora sojae]
Length = 857
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH---VRCIALGGVH 104
+CG H+ + V+G+++ WG G+LG G + A +P PY + VR IA GG
Sbjct: 699 ACGANHTLCMSVDGRVYAWGDNSFGQLGMGTKSA--LPVGTPYRVEKLVSVRGIACGGGQ 756
Query: 105 SIALT 109
S LT
Sbjct: 757 SFILT 761
>gi|340382839|ref|XP_003389925.1| PREDICTED: hypothetical protein LOC100638998 [Amphimedon
queenslandica]
Length = 730
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPT 86
SCG H L ++ K++ WG G G LG G ED FVPT
Sbjct: 37 SCGESHVAVLTLDHKIFTWGSGKYGCLGNGSEDNCFVPT 75
>gi|321259754|ref|XP_003194597.1| poly(a)+ RNA transport protein [Cryptococcus gattii WM276]
gi|317461069|gb|ADV22810.1| Poly(a)+ RNA transport protein, putative [Cryptococcus gattii
WM276]
Length = 590
Score = 37.7 bits (86), Expect = 1.7, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 14/71 (19%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPT------LNPYLDDHVRCIAL- 100
S G+ H+ V +G L+ WG G+ +LG G E+ A VP+ L PY R +A+
Sbjct: 517 SAGMRHNLAVSKSGHLYAWGYGNLAQLGLGSEEVAEVPSLVRSKLLRPY-----RSVAVS 571
Query: 101 -GGVHSIALTS 110
GG H +AL +
Sbjct: 572 AGGQHCVALAA 582
>gi|20521908|dbj|BAA92655.2| KIAA1417 protein [Homo sapiens]
Length = 1379
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 26 SENSPNWNQLANL-SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
S+NS + +L +L S S + FHS L G+++ G G GGRLG G E
Sbjct: 185 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 244
Query: 84 VPTLNPYLDDH-VRCIALGGVHSIALT 109
VP L L+ H +A H++ LT
Sbjct: 245 VPRLVEGLNGHNCSQVAAAKDHTVVLT 271
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G FHS V +G +W WG G LG G VP P L V +A GG HS+
Sbjct: 550 AAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGGV-AVAAGGFHSLV 608
Query: 108 LTS 110
+ S
Sbjct: 609 VRS 611
>gi|426353827|ref|XP_004044381.1| PREDICTED: LOW QUALITY PROTEIN: inhibitor of Bruton tyrosine kinase
[Gorilla gorilla gorilla]
Length = 1352
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 26 SENSPNWNQLANL-SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
S+NS + +L +L S S + FHS L G+++ G G GGRLG G E
Sbjct: 158 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 217
Query: 84 VPTLNPYLDDH-VRCIALGGVHSIALT 109
VP L L+ H +A H++ LT
Sbjct: 218 VPRLVEGLNGHNCSQVAAAKDHTVVLT 244
>gi|39996353|ref|NP_952304.1| lipoprotein [Geobacter sulfurreducens PCA]
gi|39983233|gb|AAR34627.1| ATS1 domain repeat protein [Geobacter sulfurreducens PCA]
Length = 2082
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 27/58 (46%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
G F GL NG LW WG G+LG G + +P + R A G HS+A+
Sbjct: 407 GAFSLGLRSNGTLWAWGGNASGQLGDGTTTPSAIPVPVVGGAGNWRTTATGTAHSVAV 464
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 47 SSSCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVP----TLNP-YLDDHVRCIAL 100
+++ G HS V +G LW WG G+LG G AA P NP + +A
Sbjct: 453 TTATGTAHSVAVRADGTLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTAVAG 512
Query: 101 GGVHSIALTS 110
GG HS+ L +
Sbjct: 513 GGAHSLGLKA 522
>gi|297678563|ref|XP_002817137.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Pongo abelii]
Length = 1353
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 26 SENSPNWNQLANL-SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
S+NS + +L +L S S + FHS L G+++ G G GGRLG G E
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 84 VPTLNPYLDDH-VRCIALGGVHSIALT 109
VP L L+ H +A H++ LT
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLT 245
>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
Length = 498
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L + + A G H+
Sbjct: 131 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHT 190
Query: 106 IALT 109
+ALT
Sbjct: 191 LALT 194
>gi|126631716|gb|AAI33847.1| Wu:fc44f06 protein [Danio rerio]
Length = 389
Score = 37.4 bits (85), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD 93
+AN+S R S CG H+ V + G L+ WG G G+LG G E + PT Y
Sbjct: 297 IANMSEISRIS----CGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPVDYFSS 352
Query: 94 H 94
H
Sbjct: 353 H 353
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 37.4 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++HS +V + KL+ WG GD RLG G ++ VP + L+ +
Sbjct: 421 ACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH 480
Query: 97 CIALGGVHSIALTS 110
+A G ++AL +
Sbjct: 481 QLACGHNMTVALAT 494
>gi|57863304|ref|NP_056340.2| inhibitor of Bruton tyrosine kinase [Homo sapiens]
gi|134034141|sp|Q9P2D0.3|IBTK_HUMAN RecName: Full=Inhibitor of Bruton tyrosine kinase; Short=IBtk
gi|66774231|gb|AAY55906.1| inhibitor of Bruton's tyrosine kinase-alpha [Homo sapiens]
gi|109731371|gb|AAI13697.1| Inhibitor of Bruton agammaglobulinemia tyrosine kinase [Homo
sapiens]
gi|109731796|gb|AAI13699.1| Inhibitor of Bruton agammaglobulinemia tyrosine kinase [Homo
sapiens]
gi|119569070|gb|EAW48685.1| inhibitor of Bruton agammaglobulinemia tyrosine kinase, isoform
CRA_a [Homo sapiens]
Length = 1353
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 26 SENSPNWNQLANL-SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
S+NS + +L +L S S + FHS L G+++ G G GGRLG G E
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 84 VPTLNPYLDDH-VRCIALGGVHSIALT 109
VP L L+ H +A H++ LT
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLT 245
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 49 SCGLFHSGLVV-----------NGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVR 96
+CG++HS +V + KL+ WG GD RLG G ++ VP + L+ +
Sbjct: 421 ACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLEYNFH 480
Query: 97 CIALGGVHSIALTS 110
+A G ++AL +
Sbjct: 481 QLACGHNMTVALAT 494
>gi|33239431|ref|NP_776292.1| protein RCC2 [Mus musculus]
gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Protein RCC2
gi|26344982|dbj|BAC36140.1| unnamed protein product [Mus musculus]
gi|55991474|gb|AAH86666.1| Regulator of chromosome condensation 2 [Mus musculus]
Length = 520
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L + + A G H+
Sbjct: 153 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHT 212
Query: 106 IALT 109
+ALT
Sbjct: 213 LALT 216
>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 1063
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 31 NWNQLANLSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLG-----FGHEDAAFV 84
+W+Q AN+ ++CG H+ L+ +GKL+ G D G+LG ++ F+
Sbjct: 31 DWSQAANV-------QQAACGGSHTLLLTKDGKLYTCGNNDHGQLGHDTNNLPNKRPQFI 83
Query: 85 PTLNPYLDDHVRCIALGGVHSIALTS 110
L Y+ V C G HS+ALT+
Sbjct: 84 SALENYIVTQVSC---GLSHSLALTN 106
>gi|440790501|gb|ELR11783.1| RasGEF domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 2063
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 32 WNQLANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPY 90
W + +++ R +CG H ++++ G L+ WG+G GGRLG G E+ P
Sbjct: 165 WTPQSIGALAGRGVQQIACGWAHCAVLMDTGDLYTWGEGAGGRLGHGDEEDHKEPHQVAS 224
Query: 91 L-DDHVRCIALGGVHSIALTS-----LAVEECNRCLILGEEEK 127
L + IA G H AL+ + C R + GE+ K
Sbjct: 225 LRGTRIVQIACGFAHMAALSDKGEVFVCGTGCGRLGLDGEQGK 267
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSI 106
+CG H+ + G L+ WG G GRLG G E P L L+ ++ +ALG H+
Sbjct: 15 ACGWSHTAAISAKGLLFTWGMGRYGRLGHGDETDQNAPRLVGELLNTNIVGVALGERHTA 74
Query: 107 ALT 109
A +
Sbjct: 75 AFS 77
>gi|145334779|ref|NP_001078735.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|8978337|dbj|BAA98190.1| regulator of chromosome condensation (cell cycle regulatory
protein) like [Arabidopsis thaliana]
gi|332008270|gb|AED95653.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 454
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 19 LVVRLFNSENSPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFG 77
+V+ +S + P + L N++V F++ G+ + + +G LW+WG+ G+LG G
Sbjct: 117 IVIDSRDSRSEPKRVEGLENVNVQAAFAS----GVVSAAIGDDGSLWVWGRSKRGQLGLG 172
Query: 78 HE-DAAFVPT-LNPYLDDHVRCIALGGVHSIALT 109
+ A VP+ + +HV ++LG H++ALT
Sbjct: 173 NGIIEARVPSRVENLAAEHVVKVSLGWGHALALT 206
>gi|399216069|emb|CCF72757.1| unnamed protein product [Babesia microti strain RI]
Length = 1470
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCG H+ ++ + LW WG+G+ G LG G F PT D+V ++ G HS+A
Sbjct: 222 SCGSAHTLVICEDSSLWSWGRGNFGVLGLGSNCDVFEPT--KVALDNVTHVSAGDRHSLA 279
Query: 108 LTS 110
+++
Sbjct: 280 VSN 282
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL-NPYLDDHVRCIALGGVHSIA 107
S G HS V N L+ WG G GRLG H + P+L N D V ++ G HS
Sbjct: 271 SAGDRHSLAVSNNSLYSWGYGANGRLGLYHSKNVYDPSLVNGKGFDQVLYVSAGQSHSAC 330
Query: 108 L 108
+
Sbjct: 331 I 331
>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
Length = 1874
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG HS +V V+GKL +G GD GRLG G P L++ H+ +A G H++
Sbjct: 1134 ACGFKHSAVVTVDGKLLTFGNGDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHTV 1193
Query: 107 ALTS 110
+++
Sbjct: 1194 CVSA 1197
>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 17/79 (21%)
Query: 49 SCGLFHSGLVVNG----------------KLWIWGKGDGGRLGFGHEDAAFVP-TLNPYL 91
+CG++H+ V KL+ WG GD GRLG G + VP + +
Sbjct: 455 ACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAALM 514
Query: 92 DDHVRCIALGGVHSIALTS 110
++ + +A G ++ALT+
Sbjct: 515 EERICQVACGNDLTVALTT 533
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHE-DAAFVPTLNPYLDDHVRCIALGGVHSI 106
+CG H+ LV G+++ WG+ GGRLG G E D + ++ +V +A G H+
Sbjct: 296 ACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDTLSGTNVELVACGEYHTC 355
Query: 107 ALT 109
A+T
Sbjct: 356 AVT 358
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 40 VSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRC 97
++ F +CG +H ++ + +++ WGKG G+LG G + PT+ L D V+
Sbjct: 565 IANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNTPTIVDVLKDKQVKN 624
Query: 98 IALGGVHSIAL 108
+A G ++ +
Sbjct: 625 VACGSKFTVVI 635
>gi|428185814|gb|EKX54666.1| hypothetical protein GUITHDRAFT_40316, partial [Guillardia theta
CCMP2712]
Length = 272
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 20/107 (18%)
Query: 33 NQLANLSVSKRFSNSS---------------SCGLFHSGLVVNGKLWIWGKGDGGRLGFG 77
N L VS++ N S +CG HS ++ +GK++ WG+ G+LG G
Sbjct: 8 NDFGQLGVSEQMMNHSLTDVQQTFDLRVEDMACGSAHSVILSDGKVFTWGQNKHGQLGHG 67
Query: 78 HEDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEECNRCLILGE 124
D ++ +L P +C+ + ++ S+A+ + + GE
Sbjct: 68 PSD--YLGSLGPTAKTDGKCVQVAAGYNF---SMALTDRGEIFVFGE 109
>gi|449453906|ref|XP_004144697.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Cucumis
sativus]
Length = 481
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 65 IWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALT 109
+WG GD GRLG G+ D+ + P D + ++ IA GG H++ LT
Sbjct: 101 VWGNGDFGRLGLGNLDSQWSPVPCSSFDREMLKGIACGGAHTLFLT 146
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 17/94 (18%)
Query: 31 NWNQLANLSVSKRFSNSS------------SCGLFHSGLVV-NGKLWIWGKGDGGRLGFG 77
N+ QL +S KRFS S G HS +V +G+L++WG G+LG G
Sbjct: 158 NFGQLG-ISDEKRFSTEPVEVRIPKEAMHISAGYNHSCVVTADGELYMWGVNSNGQLGLG 216
Query: 78 HEDAAFV--PTLNPYLDDHV-RCIALGGVHSIAL 108
+ A V PT LD V + ALG HSIA+
Sbjct: 217 KKSAKAVHLPTKVDSLDGIVIKRAALGSDHSIAV 250
>gi|383319186|ref|YP_005380027.1| chromosome condensation regulator RCC1 [Methanocella conradii
HZ254]
gi|379320556|gb|AFC99508.1| regulator of chromosome condensation RCC1 [Methanocella conradii
HZ254]
Length = 439
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G FHS L +G +W WG + G+LG G + + P LD+ V I+ G HS+A
Sbjct: 83 AAGGFHSLALKKDGTVWAWGVNNFGQLGDGTTENRYTPVQVQGLDN-VVMISAGDFHSLA 141
Query: 108 L 108
L
Sbjct: 142 L 142
>gi|154297017|ref|XP_001548937.1| hypothetical protein BC1G_12597 [Botryotinia fuckeliana B05.10]
Length = 587
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
L +GK+W WG G+ R+G G +D PTL
Sbjct: 523 LTEDGKVWAWGYGENYRIGLGSDDTVRTPTL 553
>gi|432959904|ref|XP_004086396.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 homolog [Oryzias
latipes]
Length = 496
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S C + +GKLW WG+ D G+LG G P L L + V A G H+
Sbjct: 126 SGPCAAHSLLMTTDGKLWSWGRNDKGQLGHGDTKRIEAPKLIEALAEQVIVSAACGRNHT 185
Query: 106 IALT 109
+ LT
Sbjct: 186 LVLT 189
>gi|357464831|ref|XP_003602697.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
truncatula]
gi|355491745|gb|AES72948.1| X-linked retinitis pigmentosa GTPase regulator [Medicago
truncatula]
Length = 244
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 44 FSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP--TLNPYLDDHVRCIAL 100
++ +CG +H+ ++ N G+L+ WG + G LG G A +P P+L+ V ++
Sbjct: 110 YAEEVACGGYHTCVLTNFGELYTWGSNENGCLGIGSSYAIHLPEKVQGPFLESSVVQVSC 169
Query: 101 GGVHSIALT 109
G H+ A++
Sbjct: 170 GWKHTAAIS 178
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVP 85
SCG HS +V +GKL+ +G GD GRLG G+ +P
Sbjct: 2765 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLP 2802
Score = 36.6 bits (83), Expect = 3.6, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L ++R I+ G HS A T+ V
Sbjct: 2937 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCHSAAWTAPPV 2995
>gi|255562792|ref|XP_002522401.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223538286|gb|EEF39893.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1042
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALG 101
+CG +H ++ + +++ WGKG G+LG G PT+ +L D VR +A G
Sbjct: 582 ACGSYHVAVLTSKAEVYTWGKGTNGQLGHGDNKDRNQPTVVDFLRDKQVRAVACG 636
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 17/79 (21%)
Query: 49 SCGLFHSGLVVN----------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD 92
SCG++H+ V GKL+ WG GD RLG G ++ P L
Sbjct: 463 SCGVWHTAAAVEITTESSSPGGSGSSTFGKLFTWGNGDEYRLGHGDKEPRLFPECVVALG 522
Query: 93 DHVRC-IALGGVHSIALTS 110
D C +A G ++ALT+
Sbjct: 523 DENICQVACGHNLTLALTA 541
Score = 35.0 bits (79), Expect = 9.2, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 10/67 (14%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-----HVRCIALGG 102
+CG H+ LV G+++ WG+ GGRLG G + A VP NP L D ++ +A G
Sbjct: 304 ACGGRHAVLVTKPGEIFSWGEESGGRLGHGIK--ADVP--NPKLIDTLAGMNIELVACGE 359
Query: 103 VHSIALT 109
H+ A+T
Sbjct: 360 NHTCAVT 366
>gi|410041003|ref|XP_003950928.1| PREDICTED: inhibitor of Bruton tyrosine kinase [Pan troglodytes]
Length = 1152
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 26 SENSPNWNQLANL-SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
S+NS + +L +L S S + FHS L G+++ G G GGRLG G E
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 84 VPTLNPYLDDH-VRCIALGGVHSIALT 109
VP L L+ H +A H++ LT
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLT 245
>gi|355694453|gb|AER99674.1| hect domain and RCC1 -like domain 1 [Mustela putorius furo]
Length = 574
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L G ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 19 ALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCHSAAWTAPPV 77
>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
30864]
Length = 1230
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 44 FSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDHVRCIALG 101
+++ +CG H+ +V+G+++ G D G+LG + V L PY + C G
Sbjct: 125 LASAIACGRAHTLFLVDGQVYSCGSNDQGQLGHKKHRSKPERVDALEPYTITQIAC---G 181
Query: 102 GVHSIALTS 110
HS+ALTS
Sbjct: 182 ETHSLALTS 190
>gi|344283459|ref|XP_003413489.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Loxodonta
africana]
Length = 523
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 156 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHT 215
Query: 106 IALT 109
+ALT
Sbjct: 216 LALT 219
>gi|89130650|gb|AAI14321.1| Wu:fc44f06 protein [Danio rerio]
Length = 388
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 30 PNWNQLANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLN 88
P +AN+S R S CG H+ V + G L+ WG G G+LG G E + PT
Sbjct: 291 PALVDIANMSEISRIS----CGSRHTAAVTSAGDLYTWGWGQYGQLGHGTEHSTDEPTPV 346
Query: 89 PYLDDH 94
Y H
Sbjct: 347 DYFSSH 352
>gi|7959201|dbj|BAA95994.1| KIAA1470 protein [Homo sapiens]
Length = 564
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 197 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHT 256
Query: 106 IALT 109
+ALT
Sbjct: 257 LALT 260
>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
Length = 1024
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
+CG +H+ ++ + G+L+ +G G G LG G P YL V+C+A G H+
Sbjct: 372 ACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQGTTRPKEVEYLKGSRVKCVACGPWHTA 431
Query: 107 ALTSL 111
A+ +
Sbjct: 432 AIVEV 436
>gi|426222850|ref|XP_004005595.1| PREDICTED: protein RCC2 [Ovis aries]
Length = 655
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 288 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHT 347
Query: 106 IALT 109
+ALT
Sbjct: 348 LALT 351
>gi|347838467|emb|CCD53039.1| hypothetical protein [Botryotinia fuckeliana]
Length = 587
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
L +GK+W WG G+ R+G G +D PTL
Sbjct: 523 LAEDGKVWAWGYGENYRIGLGSDDTVRTPTL 553
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHS 105
S +CG FH+ + ++ WG + G+LG G + P L ++ + + G H+
Sbjct: 501 SVACGEFHTIALCEEGVYSWGSNEYGQLGVGDTRTRYRPVLITHISSKQIVSVVCGAYHT 560
Query: 106 IALTS 110
+A+TS
Sbjct: 561 LAITS 565
>gi|397486789|ref|XP_003814505.1| PREDICTED: protein RCC2 [Pan paniscus]
Length = 507
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 140 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHT 199
Query: 106 IALT 109
+ALT
Sbjct: 200 LALT 203
>gi|151556979|gb|AAI49505.1| RCC2 protein [Bos taurus]
gi|296489973|tpg|DAA32086.1| TPA: regulator of chromosome condensation 2 [Bos taurus]
Length = 402
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 153 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHT 212
Query: 106 IALT 109
+ALT
Sbjct: 213 LALT 216
>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens]
Length = 457
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 90 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHT 149
Query: 106 IALT 109
+ALT
Sbjct: 150 LALT 153
>gi|30695429|ref|NP_199644.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26450138|dbj|BAC42188.1| regulator of chromosome condensation like [Arabidopsis thaliana]
gi|28973207|gb|AAO63928.1| putative regulator of chromosome condensation (cell cycle
regulatory protein) [Arabidopsis thaliana]
gi|332008269|gb|AED95652.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 455
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 35 LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHE-DAAFVPT-LNPYLD 92
L N++V F++ G+ + + +G LW+WG+ G+LG G+ A VP+ +
Sbjct: 135 LENVNVQAAFAS----GVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAA 190
Query: 93 DHVRCIALGGVHSIALT 109
+HV ++LG H++ALT
Sbjct: 191 EHVVKVSLGWGHALALT 207
>gi|428671737|gb|EKX72652.1| Regulator of chromosome condensation RCC1 domain containing protein
[Babesia equi]
Length = 1655
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 28 NSPNW----NQLANLSVS-KRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDA 81
+ P+W Q LS+ K S SCG H+ + NG L+ WG G G LG G+ +
Sbjct: 146 DEPSWCTPVPQPVGLSIGLKNAVTSVSCGANHTLITTSNGSLYSWGIGAFGVLGTGNINN 205
Query: 82 AFVPT---LNPYLDDHVRCIALGGVHSIAL 108
F P+ N + + G HS+AL
Sbjct: 206 NFTPSKVVFNSNAEVFITTCVAGSRHSVAL 235
>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
Length = 1160
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 25/119 (21%)
Query: 15 AEEALVVRLFNSENSPNWNQLANLSVSKRFSNSS--------------------SCGLFH 54
A+ +L++ + + WNQL L ++++ S G +H
Sbjct: 899 ADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPENAGTVTAIQVSAGGYH 958
Query: 55 S-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC----IALGGVHSIAL 108
S + NG W WG D G LG G + +P L Y + ++ GG HS+ +
Sbjct: 959 SLAIDKNGNAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAVTTVQVSAGGYHSLGI 1017
Score = 37.0 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL---GGVH 104
S G +HS L G +W WG G LG G+ + +PTL Y D A+ GG H
Sbjct: 786 SAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTAIQVSGGFH 845
Query: 105 SIA 107
A
Sbjct: 846 HTA 848
>gi|219520056|gb|AAI43737.1| IBTK protein [Homo sapiens]
Length = 1152
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 26 SENSPNWNQLANL-SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
S+NS + +L +L S S + FHS L G+++ G G GGRLG G E
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 84 VPTLNPYLDDH-VRCIALGGVHSIALT 109
VP L L+ H +A H++ LT
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLT 245
>gi|390178367|ref|XP_002137553.2| GA27285 [Drosophila pseudoobscura pseudoobscura]
gi|388859420|gb|EDY68111.2| GA27285 [Drosophila pseudoobscura pseudoobscura]
Length = 1994
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 51 GLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIAL- 108
G +H+ V +G+L++WG G G+LG G + P L + + I+LG HS+ +
Sbjct: 1256 GQYHNAAVADGRLYMWGWGVYGQLGQGSCENIATPQLVSFFKYKKILQISLGHAHSLVMC 1315
Query: 109 -TSLAVEECNRC 119
S + +E C
Sbjct: 1316 QASKSYKEAYNC 1327
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
+G +W WG + G+LG G ++FVP L D V IA G HS+A
Sbjct: 415 DGTVWAWGNNEFGQLGNGTNKSSFVPVQVKGLKD-VVAIAAGSDHSLAF 462
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 12/88 (13%)
Query: 32 WNQLAN-----LSVSKRFSN-----SSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED 80
W QL N L V +F + + + G HS L +G +W WG G+LG G+
Sbjct: 326 WGQLGNSISEKLCVPVQFKSLKDVVAIAAGCEHSLALKKDGTVWSWGNNYYGQLGNGNSI 385
Query: 81 AAFVPTLNPYLDDHVRCIALGGVHSIAL 108
++VP L D V IA G HS+AL
Sbjct: 386 DSYVPVQVRGLKD-VVAIATGNAHSLAL 412
Score = 35.4 bits (80), Expect = 7.3, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+ G +HS L +G +W WG G+LG G + ++ P L D V IA G HS+A
Sbjct: 253 AAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSEDSYDPVQVKNLKD-VVAIAAGENHSLA 311
Query: 108 L 108
L
Sbjct: 312 L 312
>gi|291396532|ref|XP_002714594.1| PREDICTED: inhibitor of Bruton's tyrosine kinase [Oryctolagus
cuniculus]
Length = 1353
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 26 SENSPNWNQLANL-SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
S+NS + +L +L S S + FHS L G+++ G G GGRLG G E
Sbjct: 159 SQNSKHHPELVDLFSRSGVYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 84 VPTLNPYLDDH-VRCIALGGVHSIALT 109
VP L L H +A H++ LT
Sbjct: 219 VPRLVEGLSGHNCSQVAAAKDHTVVLT 245
>gi|440897095|gb|ELR48863.1| Protein RCC2, partial [Bos grunniens mutus]
Length = 427
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 60 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHT 119
Query: 106 IALT 109
+ALT
Sbjct: 120 LALT 123
>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
KIAA1239-like [Oreochromis niloticus]
Length = 2697
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 49 SCGLFHSGLVV--NGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG H+ LV+ +G+LW +G G G+ G GH D+ PTL
Sbjct: 1978 ACGRHHT-LVLGSSGQLWAFGSGAKGQTGNGHNDSCLTPTL 2017
>gi|332801056|ref|NP_001095381.2| protein RCC2 [Bos taurus]
gi|151554348|gb|AAI47876.1| RCC2 protein [Bos taurus]
Length = 520
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 153 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHT 212
Query: 106 IALT 109
+ALT
Sbjct: 213 LALT 216
>gi|449016322|dbj|BAM79724.1| similar to UVB-resistance protein UVR8 [Cyanidioschyzon merolae
strain 10D]
Length = 457
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP 85
+CG +H+ + +G+L+ WG G GRLG G E +F+P
Sbjct: 136 ACGRYHTFAVSSDGRLFSWGGGKNGRLGTGTELRSFLP 173
>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Glycine max]
Length = 474
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLG---FGHEDAAFVPTLNPYLDD-HVRCIALGGV 103
SCG +H+ ++ + G+++ WG G+ G+LG + D +P LD ++ +A GGV
Sbjct: 232 SCGEYHTAVISDKGEVYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDGIFIKDVACGGV 291
Query: 104 HSIALT 109
H+ ++T
Sbjct: 292 HTCSVT 297
>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 15/77 (19%)
Query: 49 SCGLFHSGLVVN--------------GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+CG++H+ +V G+++ WG G+ G+LG G DA +P L +
Sbjct: 452 ACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVISLSNE 511
Query: 95 VRC-IALGGVHSIALTS 110
C +A G +++LTS
Sbjct: 512 NICQVACGHSLTVSLTS 528
>gi|196013243|ref|XP_002116483.1| hypothetical protein TRIADDRAFT_60444 [Trichoplax adhaerens]
gi|190581074|gb|EDV21153.1| hypothetical protein TRIADDRAFT_60444 [Trichoplax adhaerens]
Length = 1375
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
++W WG + G+LG G + A +P + ++ ++ GG HSIA TS
Sbjct: 344 QVWTWGNNNYGQLGLGDKTARHIPCCIESMKGLAIKQVSAGGYHSIAFTS 393
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 12/90 (13%)
Query: 32 WNQLANLSVSKRFS----------NSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED 80
+ QL + S ++R++ S G FHS L +G + WG+ G+LG
Sbjct: 216 YGQLGDGSSTERWTPVLVSSLTGVKSVVAGTFHSLALCSDGTVRAWGENGSGQLGISSTT 275
Query: 81 AAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
VP + P L + V+ +A G HS+AL S
Sbjct: 276 RRPVPVVVPGLTN-VQALAAGSAHSLALRS 304
Score = 35.0 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIAL 108
+G +W WG GRLG G + P P L V +A G HS+AL
Sbjct: 505 DGTVWAWGFNGSGRLGDGTTLSRLTPVQVPGLSSMV-AVAAGSTHSLAL 552
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 24 FNSENSPNWNQLANLS--VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+S P Q+ LS V K+ + S G + L V+GK++ WG+GD G+LG
Sbjct: 66 ISSGTVPIPRQITALSSYVVKKVAVHSG-GRHATALTVDGKVFWWGEGDDGKLGHFSRMN 124
Query: 82 AFVPTLNPYLD-DHVRCIALGGVHSIALTS 110
P L L +R IA G HS ALTS
Sbjct: 125 CDKPRLIEALKTKRIRDIACGSSHSAALTS 154
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,161,590,403
Number of Sequences: 23463169
Number of extensions: 86264817
Number of successful extensions: 183732
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 1325
Number of HSP's that attempted gapping in prelim test: 176295
Number of HSP's gapped (non-prelim): 8711
length of query: 131
length of database: 8,064,228,071
effective HSP length: 97
effective length of query: 34
effective length of database: 10,083,267,974
effective search space: 342831111116
effective search space used: 342831111116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)