BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035899
(131 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila
melanogaster GN=HERC2 PE=1 SV=3
Length = 4912
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 47 SSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG-- 102
S CG +S + G L WG+G RLG G+ D +PTL L DH V +ALG
Sbjct: 672 SVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGD 731
Query: 103 VHSIALTS 110
HS+ALTS
Sbjct: 732 AHSLALTS 739
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 54 HSG------LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
HSG L ++GK++ WG+G+ G+LG G+ P L L +R +A G HS
Sbjct: 3079 HSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSA 3138
Query: 107 ALTS 110
A++S
Sbjct: 3139 AISS 3142
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALTS 110
L G+++ WG+G+ G+LG G+ + P L +L+ V IA G HS A+T+
Sbjct: 4150 ALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITA 4205
Score = 35.8 bits (81), Expect = 0.069, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT-LNPYLDDHVRCIALGGVHSIA 107
CG F L G++W WGKGD RLG G + P + V +A+G +H +A
Sbjct: 3238 CGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLA 3297
Query: 108 LT 109
+T
Sbjct: 3298 VT 3299
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 35 LANLSVSKRFSNSSSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD- 92
LA L V K CG F L +G ++ WGKGD RLG G D P L
Sbjct: 4291 LAGLGVVK-----VECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQG 4345
Query: 93 DHVRCIALGGVHSIALT 109
+ IA G +H +A +
Sbjct: 4346 KKIISIATGSLHCVACS 4362
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG HS + + G+L+ WG G+ GRLG G P L
Sbjct: 3131 ACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKPKL 3170
Score = 33.1 bits (74), Expect = 0.52, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG HS + +G + WGKG GRLG G + P L
Sbjct: 4194 ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKL 4233
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAVEE 115
+G+++ WG D G+LG G A P L L H+ + G H++AL++ + E
Sbjct: 4364 SGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVKVTCGSAHTLALSTSQLSE 4420
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIAL--GGVHSIALT 109
+GK++ G+G GRLG G +P P L + V+ +A+ GG H++ALT
Sbjct: 3037 DGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT 3089
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 54 HS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIALTS 110
HS L G ++ WG GD G+LG G+ + + P L L R A G S+AL+S
Sbjct: 733 HSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVESLPRVQRVFA-GSQFSVALSS 789
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALT 109
N + WG G+ RLG G A VPT L+ H V+ + G +S A+T
Sbjct: 634 NHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSAAIT 684
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 63 LWIWGKGDGGRLGFGHEDAAFVP 85
+W WG GD G+LG G D +P
Sbjct: 4263 VWSWGDGDYGKLGRGGSDGCKLP 4285
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
S G HS V +G+L+ WG+GD GRLG G ++ +PTL + + V ++ G H+IA
Sbjct: 517 SAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-VGEVSCGSSHTIA 575
Query: 108 LT 109
L+
Sbjct: 576 LS 577
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
SCG HS +V +GKL+ +G GD GRLG G+ +P L+ + + +A G H++
Sbjct: 4140 SCGFKHSAVVTSDGKLFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTL 4199
Query: 107 ALTS 110
A+++
Sbjct: 4200 AVSA 4203
Score = 38.9 bits (89), Expect = 0.008, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 25 NSENSPNWNQLANLSVSKRFSN--SSSCGLFHS-GLVVNGK-LWIWGKGDGGRLGFGHED 80
NS N P ++ K SN SCG H+ L +G+ +W +G GD G+LG G +
Sbjct: 549 NSRNIP--------TLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTN 600
Query: 81 AAFVPTLNPYLDD-HVRCIALGGVHSIALTS---LAVEECNRCLILGEEEKRRLK 131
+ P + L +R + G S+ALTS + C CL G E L+
Sbjct: 601 RVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTSLAV 113
L NG ++ WG G+LG GH + PTL L +VR I+ G HS A T+ V
Sbjct: 4305 ALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCHSAAWTAPPV 4363
Score = 36.6 bits (83), Expect = 0.050, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 42 KRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL--NPYLDDHVRCIA 99
K+ S+S G+++ WG GD G+LG G+ P L P V C++
Sbjct: 458 KKVSSSKGSDGHTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVS 517
Query: 100 LGGVHSIALT 109
G HS A+T
Sbjct: 518 AGYRHSAAVT 527
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKL-WIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHS 105
+CGL H+ + +G + W +G GD G+LG G+ A P ++ ++ +A G S
Sbjct: 4192 ACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCGIGIKKVACGTQFS 4251
Query: 106 IALT 109
+ALT
Sbjct: 4252 VALT 4255
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 48 SSCGL-FHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVH 104
+SCG HS L +G+++ WG GD G+LG G+ D P + + V ++ G H
Sbjct: 4086 TSCGSDGHSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKH 4145
Query: 105 SIALTS 110
S +TS
Sbjct: 4146 SAVVTS 4151
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 20 VVRLFNSENSPNW-NQLANLSVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFG 77
V R F S +P LA + +++ S G HS L ++G ++ WGK + G+LG G
Sbjct: 172 VGRKFPSTTTPQIVEHLAGVPLAQ-----ISAGEAHSMALSMSGNIYSWGKNECGQLGLG 226
Query: 78 HEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTS 110
H ++ P+L LD+ V +A GG HS LT
Sbjct: 227 HTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQ 260
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIAL-----GG 102
+CG +HS L G+L+ WG+ G+LG G + F T P + +H+ + L G
Sbjct: 144 TCGDYHSLALSKGGELFAWGQNLHGQLGVGRK---FPSTTTPQIVEHLAGVPLAQISAGE 200
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 201 AHSMALS 207
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1
SV=3
Length = 4836
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 624 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRC---GSQFSIALT 674
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3114
Query: 108 LTS 110
LTS
Sbjct: 3115 LTS 3117
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 665 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 724
Query: 108 LT 109
LT
Sbjct: 725 LT 726
Score = 36.6 bits (83), Expect = 0.048, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL---------DDHVRC 97
+ S G + L G+++ WG GDGGRLG G VP P + HV
Sbjct: 501 AHSDGHHYLALAATGEVYSWGCGDGGRLGHGDT----VPLEEPKVISAFSGKQAGKHVVH 556
Query: 98 IALGGVHSIALTS 110
IA G +S A+T+
Sbjct: 557 IACGSTYSAAITA 569
Score = 35.8 bits (81), Expect = 0.080, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3213 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3272
Query: 108 LT 109
+T
Sbjct: 3273 VT 3274
Score = 35.8 bits (81), Expect = 0.088, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG + + + G+L+ WG+G+ GRLG G + +P L
Sbjct: 558 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 597
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3106 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3165
Query: 105 SIALT 109
++ALT
Sbjct: 3166 TLALT 3170
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSIA 107
CG F L +G ++ WGKGD RLG G +D P + V IA G +H +
Sbjct: 4206 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4265
Query: 108 LT 109
T
Sbjct: 4266 CT 4267
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 63 LWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSIALT 109
+W WG GD G+LG G D VP ++ V + G S+ALT
Sbjct: 4168 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTSLAV 113
+G+++ WG D G+ G G PTL L+ + +A G HS+A T++ V
Sbjct: 3276 SGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV 3330
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTS 110
+G+++ WG D G+LG G +A P L L V +A G H++A ++
Sbjct: 4269 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWST 4320
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+ G HS V G L+ WGKG GRLG + P L L H
Sbjct: 4099 AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH 4145
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALTSLAV 113
L G ++ WG GD G+LG G + +P L+ C I G S+ALT V
Sbjct: 3168 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3226
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCI-----ALGGVHSIALTS 110
L G+++ WG+ + G+LG G+ P P + + +R I A GG HS +T+
Sbjct: 4055 ALSSEGEVYSWGEAEDGKLGHGNRS----PCDRPRVIESLRGIEVVDVAAGGAHSACVTA 4110
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1
SV=2
Length = 4834
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGVHSIALT 109
NG++W WG GD G+LG G D P L L D VRC G SIALT
Sbjct: 623 NGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRC---GSQFSIALT 673
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
S G + L V+GK++ WG+GD G+LG P L L +R IA G HS A
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAA 3113
Query: 108 LTS 110
LTS
Sbjct: 3114 LTS 3116
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIA 107
CG F L +G+++ WGKGD RLG G E+ P L L V +A G H +A
Sbjct: 664 CGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLA 723
Query: 108 LT 109
LT
Sbjct: 724 LT 725
Score = 37.0 bits (84), Expect = 0.040, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 17/98 (17%)
Query: 24 FNSEN-SPNWNQ-LANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDA 81
+NS+ +P Q LA+ ++ K ++S G + L G+++ WG GDGGRLG G
Sbjct: 477 YNSDTLAPQLVQGLASRNIVKIAAHSD--GHHYLALAATGEVYSWGCGDGGRLGHGDT-- 532
Query: 82 AFVPTLNPYL---------DDHVRCIALGGVHSIALTS 110
VP P + HV IA G +S A+T+
Sbjct: 533 --VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA 568
Score = 35.8 bits (81), Expect = 0.080, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Query: 50 CGL-FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIA 107
CG F L +G +W WGKGD RLG G + P + L + +A+G +H +A
Sbjct: 3212 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVAVGALHCLA 3271
Query: 108 LT 109
+T
Sbjct: 3272 VT 3273
Score = 35.8 bits (81), Expect = 0.088, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
+CG + + + G+L+ WG+G+ GRLG G + +P L
Sbjct: 557 ACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPML 596
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGG--VH 104
+CG HS L +G+L+ WG G+ GRLG G P + L H V +A G
Sbjct: 3105 ACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQ 3164
Query: 105 SIALT 109
++ALT
Sbjct: 3165 TLALT 3169
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 50 CG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSIA 107
CG F L +G ++ WGKGD RLG G +D P + V IA G +H +
Sbjct: 4204 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVC 4263
Query: 108 LT 109
T
Sbjct: 4264 CT 4265
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 63 LWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSIALT 109
+W WG GD G+LG G D VP ++ V + G S+ALT
Sbjct: 4166 VWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSIALTSLAV 113
+G+++ WG D G+ G G PTL L+ + +A G HS+A T++ V
Sbjct: 3275 SGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDV 3329
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 60 NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSIALTS 110
+G+++ WG D G+LG G +A P L L V +A G H++A ++
Sbjct: 4267 DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWST 4318
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH 94
+ G HS V G L+ WGKG GRLG + P L L H
Sbjct: 4097 AAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH 4143
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-IALGGVHSIALTSLAV 113
L G ++ WG GD G+LG G + +P L+ C I G S+ALT V
Sbjct: 3167 ALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 3225
Score = 30.0 bits (66), Expect = 4.0, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 9/60 (15%)
Query: 56 GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCI-----ALGGVHSIALTS 110
L G+++ WG+ + G+LG G+ P P + + +R I A GG HS +T+
Sbjct: 4053 ALSSEGEVYSWGEAEDGKLGHGNRS----PCDRPRVIESLRGIEVVDVAAGGAHSACVTA 4108
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 22 RLF----NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVV-NGKLWIWGKGDG 71
RLF NSE ++N+ V ++ + SCG +HS V +G+L+++G+ +
Sbjct: 160 RLFMWGDNSEGQIGLKNVSNVCVPQQVTIGKPVSWISCGYYHSAFVTTDGELYVFGEPEN 219
Query: 72 GRLGFGHE--DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
G+LG ++ P L + + V +A GG H++ LT AV
Sbjct: 220 GKLGLPNQLLGNHRTPQLVSEIPEKVIQVACGGEHTVVLTENAV 263
Score = 38.9 bits (89), Expect = 0.008, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ + G ++ +G G G+LG G E+ F+PTL + +L V+ +A GG H
Sbjct: 301 SCGENHTALITDIGLMYTFGDGRHGKLGLGLENFTNHFIPTLCSNFLRFIVKLVACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MVVFAA 366
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG HS +V N KL+++G + G+LG G + A PT L + V+ A G H++
Sbjct: 41 SCGDEHSAVVTGNNKLYMFGSNNWGQLGLGSKSAISKPTCVKALKPEKVKLAACGRNHTL 100
Query: 107 ALT 109
T
Sbjct: 101 VST 103
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 40 VSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC-I 98
V R S SC + V GKLW WG+ D G+LG G VP L L V
Sbjct: 139 VQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVFVHA 198
Query: 99 ALGGVHSIALT 109
A G H++ALT
Sbjct: 199 ACGRNHTLALT 209
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)
Query: 49 SCGLFHSGLVVNGK-LWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CG+ HS ++ + K ++ WG G GRLG + VP L D R A +++ A
Sbjct: 327 ACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLFDFPGRGAA--QIYAGA 384
Query: 108 LTSLAVEECNRCLILGEEEKRR 129
S AV E G R
Sbjct: 385 TCSFAVSEMGGLFFWGATNTSR 406
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAA--FVPTLNPYLDDHVRCIALGGVHS 105
+CG FHS + +G LW +G G G+LG G + + VPT L V IA G H+
Sbjct: 833 ACGQFHSAFICSDGSLWTFGWGVWGQLGHGGRNNSNQLVPTRVNGLICKVTQIACGRAHT 892
Query: 106 IALTSLAVEECNRCLILG 123
+ LT + R L+ G
Sbjct: 893 VVLT-----DTGRVLVCG 905
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 47 SSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP--TLNPYLDDHVRCIALGGV 103
S +CGL HS L+ + G L+ WGKG +LG G+++ P P V ++LG
Sbjct: 1026 SVACGLSHSALITSEGTLYTWGKGLDYQLGHGNKNERMEPHQVFEPNGAKWVN-VSLGNN 1084
Query: 104 HSIALT 109
H+IA T
Sbjct: 1085 HTIAST 1090
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
+CG H+ L+ + G ++ +G G G+LG G E++ F+PTL + +L V+ ++ GG H
Sbjct: 301 ACGENHTALITDMGLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQLVSCGGCH 360
Query: 105 SIALTS 110
++ +
Sbjct: 361 TLVFAT 366
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSS-----SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH 78
NSE + N+ V ++ + SCG +HS V G+L+ +G+ + G+LG +
Sbjct: 167 NSEGQIGLENVTNVCVPQQVTVGKPISWISCGYYHSAFVTTEGQLYTFGEPECGKLGLPN 226
Query: 79 EDAA--FVPTLNPYLDDHVRCIALGGVHSIALTSLAV 113
+ +P P + V +A GG H++ LT AV
Sbjct: 227 QLLVNHRMPQPVPGIPGKVVQVACGGGHTVVLTEKAV 263
Score = 32.3 bits (72), Expect = 0.91, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG H+ +V N KL+++G + G+LG G + PT L + V+ A G H++
Sbjct: 41 SCGDEHTAVVTGNNKLYMFGSNNWGQLGLGSKSTVSKPTCVKALKPEKVKFAACGRNHTL 100
Query: 107 ALT 109
T
Sbjct: 101 VST 103
>sp|Q54HT1|TIRA_DICDI Protein tirA OS=Dictyostelium discoideum GN=tirA PE=2 SV=1
Length = 1336
Score = 38.5 bits (88), Expect = 0.011, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 11/85 (12%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDA------AFVPTLNPY---LDDHVRCI 98
SCG + L+ N G+++ WGK D G+LG G+ D+ V +PY + + I
Sbjct: 451 SCGKDFNVLLTNEGQVFSWGKNDQGQLGLGNSDSKENYEIKLVNFDDPYDSNSNKFISFI 510
Query: 99 ALGGVHSIALTSLAVEECNRCLILG 123
+ GG HSIA+ S + + N C + G
Sbjct: 511 SCGGNHSIAIESNSSTDGN-CRLYG 534
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAA--FVPTL-NPYLDDHVRCIALGGVH 104
SCG H+ L+ G L+ +G G G+LG G E+ F PTL + +L V+ IA GG H
Sbjct: 301 SCGENHTALMTELGLLYTFGDGRHGKLGLGMENFTNQFFPTLCSNFLRFAVQLIACGGCH 360
Query: 105 SIALTS 110
+ +
Sbjct: 361 MLVFAT 366
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 7/70 (10%)
Query: 49 SCGLFHSGLV-VNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPY----LDDHVRCIALGGV 103
SCG +HS V ++G+L+ +G+ + G+LG +E + +P + + V +A GG
Sbjct: 196 SCGYYHSAFVTMDGELYTFGEPENGKLGLPNE--LLMNHRSPQRVLGIPERVIQVACGGG 253
Query: 104 HSIALTSLAV 113
H++ LT V
Sbjct: 254 HTVVLTEKVV 263
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHSI 106
SCG H+ +V N KL+++G + G+LG G + A PT L + V+ A G H++
Sbjct: 41 SCGDEHTAIVTGNNKLYMFGSNNWGQLGLGSKAAIIKPTCIKALKPEKVKLAACGRNHTL 100
Query: 107 ALT 109
T
Sbjct: 101 VST 103
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S C + GKLW WG+ D G+LG G P L L + V A G H+
Sbjct: 128 SGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHT 187
Query: 106 IALT 109
+ALT
Sbjct: 188 LALT 191
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 26 SENSPNWNQLANL-SVSKRFSNSSSCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAF 83
S+NS + +L +L S S + FHS L G+++ G G GGRLG G E
Sbjct: 159 SQNSKHHPELVDLFSRSGIYIKQVVLCKFHSVFLSQKGQVYTCGHGPGGRLGHGDEQTCL 218
Query: 84 VPTLNPYLDDH-VRCIALGGVHSIALT 109
VP L L+ H +A H++ LT
Sbjct: 219 VPRLVEGLNGHNCSQVAAAKDHTVVLT 245
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 37.4 bits (85), Expect = 0.024, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLD-DHVRCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L + + A G H+
Sbjct: 153 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHT 212
Query: 106 IALT 109
+ALT
Sbjct: 213 LALT 216
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAF--VPTLNPYLDDH-VRCIALGGVH 104
SCG S ++ + G L+ +G+GD GRLG G + P L L H + ++ GG H
Sbjct: 344 SCGTNRSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQSTPKLVQSLQGHFIIDMSSGGGH 403
Query: 105 SIALTS 110
S+ LT+
Sbjct: 404 SLVLTN 409
Score = 36.2 bits (82), Expect = 0.062, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD----HVRCIALGGV 103
S G HS + + G L+ +G G G+LG G+ ++ P L + V IA GG
Sbjct: 194 STGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRVVSIANGGK 253
Query: 104 HSIALT 109
HS+ALT
Sbjct: 254 HSLALT 259
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 47 SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV-RCIALGGVHS 105
S SC + GKLW WG+ + G+LG G P L L V A G H+
Sbjct: 155 SGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHT 214
Query: 106 IALT 109
+ALT
Sbjct: 215 LALT 218
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVPT-LNPYLDDHVRCIALGGVHS 105
SCG HS V + GK++ WG G G+LG G ++ +F+PT + + ++ G HS
Sbjct: 80 SCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKALAGIKIIQVSCGHYHS 139
Query: 106 IALT 109
+AL+
Sbjct: 140 LALS 143
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHED-AAFVPTLNPYLDD-HVRCIALGGVHS 105
SCG +HS L +G ++ WG+ G+LG G + +P L+ + +A GG HS
Sbjct: 133 SCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGTHS 192
Query: 106 IALT 109
AL+
Sbjct: 193 FALS 196
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 36.6 bits (83), Expect = 0.051, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGH-EDAAFVP----TLNPYLDDHVRCIALGG 102
SCG HS V + G+++ WG G G+LG G ++ +F P TLN D + ++ G
Sbjct: 81 SCGKEHSLAVCHKGRVFAWGAGSEGQLGIGEFKEISFTPKKIMTLN---DIKIIQVSCGH 137
Query: 103 VHSIALT 109
HS+AL+
Sbjct: 138 YHSLALS 144
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 15/70 (21%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--------IA 99
SCG +HS L + +++ WGK G+LG G E F +P VR +A
Sbjct: 134 SCGHYHSLALSKDSQVFSWGKNSHGQLGLGKE---FPSQASP---QRVRSLEGIPLAQVA 187
Query: 100 LGGVHSIALT 109
GG HS AL+
Sbjct: 188 AGGAHSFALS 197
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 49 SCGLFHSG-LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCG H+ L +GK++ +G G+LG+ P L +D V I G H++A
Sbjct: 242 SCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPEKRGPQLVERIDGLVSQIDCGSYHTLA 301
>sp|Q5BIW4|ALS2_PANTR Alsin OS=Pan troglodytes GN=ALS2 PE=2 SV=1
Length = 1657
Score = 35.8 bits (81), Expect = 0.088, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 15/57 (26%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--------IALGGVHSIALTS 110
++W WGKG G+LG G +P L P V+C + GG HS+ALT+
Sbjct: 527 EVWTWGKGKEGQLGHGD----VLPRLQPLC---VKCLDGKEVIHLEAGGYHSLALTA 576
>sp|Q96Q42|ALS2_HUMAN Alsin OS=Homo sapiens GN=ALS2 PE=1 SV=2
Length = 1657
Score = 35.8 bits (81), Expect = 0.088, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 15/57 (26%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--------IALGGVHSIALTS 110
++W WGKG G+LG G +P L P V+C + GG HS+ALT+
Sbjct: 527 EVWTWGKGKEGQLGHGD----VLPRLQPLC---VKCLDGKEVIHLEAGGYHSLALTA 576
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 35.4 bits (80), Expect = 0.097, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 53 FHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGV--HSIALT 109
FHS L G+++ G G GGRLG G E VP L L H C + G H++ LT
Sbjct: 188 FHSVFLSQKGQVYTCGHGQGGRLGHGDELTCLVPRLVEGLRGH-PCTQVAGAKDHTVVLT 246
>sp|P0C5Y8|ALS2_RAT Alsin OS=Rattus norvegicus GN=Als2 PE=2 SV=1
Length = 1651
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 15/57 (26%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--------IALGGVHSIALTS 110
++W WGKG G+LG G +P L P V+C + GG HS+ALT+
Sbjct: 521 EVWTWGKGKEGQLGHGD----VLPRLQPLC---VKCLDGKEVIHLEAGGSHSLALTA 570
>sp|Q920R0|ALS2_MOUSE Alsin OS=Mus musculus GN=Als2 PE=1 SV=3
Length = 1651
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 15/57 (26%)
Query: 62 KLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--------IALGGVHSIALTS 110
++W WGKG G+LG G +P L P V+C + GG HS+ALT+
Sbjct: 521 EVWTWGKGKEGQLGHGD----VLPRLQPLC---VKCLDGKEVIHLEAGGSHSLALTA 570
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 15/70 (21%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRC--------IA 99
SCG +H L +G+ + WGK G+LG G E F +P VR +A
Sbjct: 143 SCGNWHCLALAADGQFFTWGKNSHGQLGLGKE---FPSQASP---QRVRSLEGIPLAQVA 196
Query: 100 LGGVHSIALT 109
GG HS AL+
Sbjct: 197 AGGAHSFALS 206
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGF-GHEDAAFVPTLNPYLDDH-VRCIALGGVHS 105
+CG HS L G+L+ WG G G+LG ED+ VP L L+ + ++ G H
Sbjct: 90 ACGESHSLALSDRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHC 149
Query: 106 IALTS 110
+AL +
Sbjct: 150 LALAA 154
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
Query: 40 VSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRC 97
+S R +CG HS ++ +G+++ G G+LG HE P + D H+
Sbjct: 31 ISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG--HEREGNKPEQIGALADQHIIH 88
Query: 98 IALGGVHSIALT 109
+A G HS+AL+
Sbjct: 89 VACGESHSLALS 100
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 34.7 bits (78), Expect = 0.17, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 49 SCGLFHSGLVVNGK-LWIWGKGDGGRLGFGHEDAAFVP 85
SCG H V N + ++ WG+GD GRLG +D+ P
Sbjct: 456 SCGASHVLAVTNEREVFSWGRGDNGRLGLATQDSHNCP 493
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 48 SSCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHED 80
++CG F + G+++ WGKG GRLG ED
Sbjct: 623 AACGDAFTLAIGAEGEVYTWGKGARGRLGRKEED 656
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNP 89
+CG H L +L+ WG+GD GRLG G ++ P P
Sbjct: 449 ACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVP 490
Score = 29.3 bits (64), Expect = 7.5, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAF-----VPTLNPYLDDHVRC 97
+CG F + +++ WGKG GRLG EDA + +PY V C
Sbjct: 619 ACGDAFTVAIGAESEVYSWGKGARGRLGRRDEDAGLPRPVQLDETHPYTVTSVSC 673
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 34.3 bits (77), Expect = 0.21, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNG--KLWIWGKGDGGRLGFGHEDAA 82
++E+ P+ QL+ L + S +CG H+ +++ WG GD GRLG G+
Sbjct: 51 DAEDRPSPTQLSALDGHQIVS--VTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDL 108
Query: 83 FVPTLNPYLDD-HVRCIALGGVHSIALT 109
F P L ++ IA G H +A+T
Sbjct: 109 FTPLPIKALHGIRIKQIACGDSHCLAVT 136
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 49 SCGLFHSGLVVNGKLWI-WGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VRCIALGGVHSI 106
S G HS +++G + WG+G+ G+LG G + PT LD H + + G H++
Sbjct: 21 SAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTV 80
Query: 107 ALTSLAVE 114
A + +E
Sbjct: 81 AYSQSGME 88
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVP-TLNPYLDDHVRCIALGGVHSI 106
+CG H + + G++ WG+ G+LG G + + VP + + ++ +A G H+
Sbjct: 126 ACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTA 185
Query: 107 ALT 109
A+T
Sbjct: 186 AVT 188
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 39 SVSKRFSNSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDH-VR 96
++S F + S G H+ L +GKL+ WG G++G G+ P + DD V
Sbjct: 272 ALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVV 331
Query: 97 CIALGGVHSIALT 109
++ G H++A+T
Sbjct: 332 QVSCGWRHTLAVT 344
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAF 83
++ N P ++ N +KR N + CG S V++ G+++ WG G+LG G+
Sbjct: 164 STANQPTPRKVTNCLHTKRVVNIA-CGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQL 222
Query: 84 VPTLNPYLDDHVRC---IALGGVHSIALT 109
P L H C I G H++ALT
Sbjct: 223 TPVRVAAL--HGMCVNQIVCGYAHTLALT 249
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 31 NWNQLANLSVSKRFS---NSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT 86
N NQL + V+ N CG H+ L G L+ WG G+LG G ++ PT
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPT 277
Query: 87 LNPYLDDHVRCIALGGVHS 105
+ + R I + HS
Sbjct: 278 --QIMVEKERVIEIAACHS 294
>sp|Q119L1|MURQ_TRIEI N-acetylmuramic acid 6-phosphate etherase OS=Trichodesmium
erythraeum (strain IMS101) GN=murQ PE=3 SV=1
Length = 307
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
Query: 20 VVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHE 79
+V LFN E+ +A S R + + + L GKL+ G G GRLG
Sbjct: 30 LVDLFNQEDKQTLKAIA----SSRLQLAQAVDMTTKALSQGGKLFYVGAGTSGRLGV--L 83
Query: 80 DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEEC 116
DAA P + V+ I GG +++ +S +E+
Sbjct: 84 DAAECPPTFCTSPELVQGIIAGGANALLRSSEDLEDS 120
>sp|Q05BV3|EMAL5_HUMAN Echinoderm microtubule-associated protein-like 5 OS=Homo sapiens
GN=EML5 PE=2 SV=3
Length = 1969
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 48 SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
+S G+ S VV LW W KG+ + G +D FV +NPY+ D +
Sbjct: 788 ASVGIDDSHTVV---LWDWKKGEKLSIARGSKDKIFVVKMNPYVPDKL 832
>sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens
GN=MYCBP2 PE=1 SV=3
Length = 4640
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
SCG HS +++ NG ++ +G G G+LG G ++ PTL L + G H+
Sbjct: 908 SCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQALPGPSTQVTAGSNHTAV 967
Query: 108 L 108
L
Sbjct: 968 L 968
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 33.1 bits (74), Expect = 0.54, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 49 SCG-LFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAF-----VPTLNPYLDDHVRC 97
+CG F + G+++ WGKG GRLG EDA + +PY+ V C
Sbjct: 625 ACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDETHPYMVTSVSC 679
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 49 SCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAF----VPTLNPYLDDHVRCIALGGVH 104
SCG H+ V+ G WG + G G G E + VP L +L HV C G H
Sbjct: 339 SCGSEHNLAVIGGVCHSWGWNEHGMCGDGTEADVWAPKPVPGLRFFLGLHVGC---GAGH 395
Query: 105 SIALTSL 111
S+AL L
Sbjct: 396 SLALCQL 402
>sp|Q6ED65|EMAL5_RAT Echinoderm microtubule-associated protein-like 5 OS=Rattus
norvegicus GN=Eml5 PE=1 SV=2
Length = 1977
Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 48 SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
+S G+ S +V LW W KG+ + G +D FV +NPY+ D +
Sbjct: 788 ASVGIDDSHTIV---LWDWKKGEKLSVARGSKDKIFVVKMNPYVPDKL 832
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CG H+ ++ + G+++ WG G+LG G++ PT P + + R I + HS A
Sbjct: 263 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT--PVVVEKDRIIEIAACHS-A 319
Query: 108 LTSLAVEECNRCLILGE 124
TS A + + G+
Sbjct: 320 HTSAAKSQGGHVYMWGQ 336
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 47 SSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVH 104
S +CG S VV+ G++++WG G+LG G P L V+ +A G H
Sbjct: 209 SIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAH 268
Query: 105 SIALT 109
++ LT
Sbjct: 269 TLVLT 273
>sp|Q7TPH6|MYCB2_MOUSE Probable E3 ubiquitin-protein ligase MYCBP2 OS=Mus musculus
GN=Mycbp2 PE=1 SV=2
Length = 4711
Score = 32.3 bits (72), Expect = 0.77, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 49 SCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAFVPTL 87
SCG HS +++ NG ++ +G G G+LG G ++ PTL
Sbjct: 908 SCGFHHSVVLMENGDVYTFGYGQHGQLGHGDVNSRGCPTL 947
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 32.3 bits (72), Expect = 0.99, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 4/77 (5%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHVRCIALGGVHSIA 107
+CG H+ ++ + G+++ WG G+LG G++ PT P + + R I + HS A
Sbjct: 263 ACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPT--PVVVEKDRIIEIAACHS-A 319
Query: 108 LTSLAVEECNRCLILGE 124
TS A + + G+
Sbjct: 320 HTSAAKTQGGHVYMWGQ 336
Score = 30.4 bits (67), Expect = 3.5, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG S VV+ G++++WG G+LG G P L V+ +A G H++
Sbjct: 211 ACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 107 ALT 109
LT
Sbjct: 271 VLT 273
>sp|Q67RV4|MURQ_SYMTH N-acetylmuramic acid 6-phosphate etherase OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=murQ PE=3 SV=1
Length = 300
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Query: 20 VVRLFNSENSPNWNQLANLSVSKRFSN-SSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGH 78
+VR+ N ++ Q+A L+V K + + + L L G+L+ G G GRLG
Sbjct: 26 MVRIINEQD----KQVA-LAVEKELPHIARAVDLIAERLRAGGRLFYVGAGTSGRLGI-- 78
Query: 79 EDAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEECN 117
DA+ +P D V+ + GG+ ++ T E+
Sbjct: 79 LDASEIPPTYGAPPDLVQGVIAGGLEAVFRTREGAEDSR 117
>sp|Q8BQM8|EMAL5_MOUSE Echinoderm microtubule-associated protein-like 5 OS=Mus musculus
GN=Eml5 PE=2 SV=2
Length = 1977
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 48 SSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDDHV 95
+S G+ S +V LW W KG+ + G +D FV +NPY+ D +
Sbjct: 788 ASVGIDDSHTIV---LWDWKKGEKLSVTRGSKDKIFVVKMNPYVPDKL 832
>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region 16 protein homolog
OS=Mus musculus GN=Wbscr16 PE=2 SV=1
Length = 461
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 50 CGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP 85
CGL H + N G+L++WGK G LG G + + P
Sbjct: 398 CGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFP 434
>sp|B1XMC7|MURQ_SYNP2 N-acetylmuramic acid 6-phosphate etherase OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=murQ PE=3 SV=1
Length = 301
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 20 VVRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHE 79
+V LFN E+ +AN R + + + + L+ G+L+ G G GRLG
Sbjct: 30 LVDLFNQEDQKTLEAIAN----AREALAQAIEITSEALMHGGRLFYVGAGTSGRLGV--L 83
Query: 80 DAAFVPTLNPYLDDHVRCIALGGVHSIALTSLAVEE 115
DAA P + V+ I GG ++ +S +E+
Sbjct: 84 DAAECPPTFCTPPELVQGIIAGGAGALVRSSEDLED 119
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 23 LFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDA 81
L NS N P ++A L + +CG H+ ++ + G+++ WG G+LG G++
Sbjct: 239 LGNSGNQPTPCRVAALQGIR--VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 82 AFVPTLNPYLDDHVRCIALGGVHS 105
PT P + R I + HS
Sbjct: 297 QSYPT--PVTVEKDRIIEIAACHS 318
Score = 28.9 bits (63), Expect = 9.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG VV+ G++++WG G+LG G+ P L V+ +A G H++
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 107 ALT 109
LT
Sbjct: 271 VLT 273
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 23 LFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDA 81
L NS N P ++A L + +CG H+ ++ + G+++ WG G+LG G++
Sbjct: 239 LGNSGNQPTPCRVAALQGIR--VQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSN 296
Query: 82 AFVPTLNPYLDDHVRCIALGGVHS 105
PT P + R I + HS
Sbjct: 297 QSYPT--PVTVEKDRIIEIAACHS 318
Score = 28.9 bits (63), Expect = 9.3, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 49 SCGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSI 106
+CG VV+ G++++WG G+LG G+ P L V+ +A G H++
Sbjct: 211 ACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQGIRVQRVACGYAHTL 270
Query: 107 ALT 109
LT
Sbjct: 271 VLT 273
>sp|Q46L21|MURQ_PROMT N-acetylmuramic acid 6-phosphate etherase OS=Prochlorococcus
marinus (strain NATL2A) GN=murQ PE=3 SV=1
Length = 310
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 53 FHSGLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT---LNPYLDDHVRCIALGGVHSIALT 109
S L NG+L+ G G GRLG DA+ P NP D V+ I GG+ S+ +
Sbjct: 64 ITSRLKSNGRLFYIGTGTSGRLGV--LDASECPPTFCTNP---DLVQGIIAGGISSLTTS 118
Query: 110 SLAVEECNRCLI 121
S +E+ + I
Sbjct: 119 SEHLEDVSEIAI 130
>sp|Q96I51|WBS16_HUMAN Williams-Beuren syndrome chromosomal region 16 protein OS=Homo
sapiens GN=WBSCR16 PE=1 SV=2
Length = 464
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 50 CGLFHSGLVVN-GKLWIWGKGDGGRLGFGHEDAAFVP 85
CGL H + N G+L++WGK G LG G + + P
Sbjct: 401 CGLSHFAALTNKGELFVWGKNIRGCLGIGRLEDQYFP 437
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 7/89 (7%)
Query: 25 NSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHEDAAF 83
++ N P ++ N KR +CG S V+ NG+++ WG G+LG G+
Sbjct: 164 STANQPTPRKVTNCLHIKRVV-GIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQL 222
Query: 84 VPTLNPYLDDHVRC---IALGGVHSIALT 109
P L H C I G H++ALT
Sbjct: 223 TPVRVAAL--HSVCVNQIVCGYAHTLALT 249
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Query: 31 NWNQLANLSVSKRFS---NSSSCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHEDAAFVPT 86
N NQL + V+ S N CG H+ L G L+ WG G+LG G+++ P
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPA 277
Query: 87 LNPYLDDHVRCIALGGVHSIALTSLAVEECNRCLILGE 124
+ + R + + HS A TS A + + G+
Sbjct: 278 --HIMVEKERVVEIAACHS-AHTSAAKTQGGHVYMWGQ 312
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALT 109
L ++G ++ WG+ G+LG E+ +VP L L + I G H+ ALT
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYL-DDHVRCIALGGVHSIALT 109
L ++G ++ WG+ G+LG E+ +VP L L + I G H+ ALT
Sbjct: 205 LTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALT 258
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 49 SCGLFHS-GLVVNGKLWIWGKGDGGRLGFGHE-DAAFVPTL-NPYLDDHVRCIALGGVHS 105
+CG +HS L +++ WG+ G+LG G E P L L +A GG HS
Sbjct: 143 ACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHS 202
Query: 106 IALT 109
LT
Sbjct: 203 FVLT 206
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 21 VRLFNSENSPNWNQLANLSVSKRFSNSSSCGLFHSGLVVNGKLWIWGKGDGGRLGFGHED 80
R + S +P + LA +++ + L L G+++ WG G G+LG G +
Sbjct: 140 ARAYVSPRAPFYRPLAPELRARQLELGAEHALL---LDAAGQVFSWGGGRHGQLGHGTLE 196
Query: 81 AAFVPTLNPYLDDHVRC-IALGGVHSIALT 109
A P L L V +A GG HS+ ++
Sbjct: 197 AELEPRLLEALQGLVMAEVAAGGWHSVCVS 226
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 48 SSCGLFHSGLVV-NGKLWIWGKGDGGRLGFGHED 80
+SCG H+ +V G+L+ WG G G+L GHED
Sbjct: 305 ASCGSRHTAVVTRTGELYTWGWGKYGQL--GHED 336
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 57 LVVNGKLWIWGKGDGGRLGFGHEDAAFVPTLNPYLDD-HVRCIALGGVHSIALT 109
L G+++ WG G G+LG G +A P L L + +A GG HS+ L+
Sbjct: 176 LCAAGQVFSWGAGRHGQLGHGTLEAELEPRLLEALQGLRMAKVAAGGWHSVCLS 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,193,540
Number of Sequences: 539616
Number of extensions: 2033450
Number of successful extensions: 4432
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 4269
Number of HSP's gapped (non-prelim): 207
length of query: 131
length of database: 191,569,459
effective HSP length: 97
effective length of query: 34
effective length of database: 139,226,707
effective search space: 4733708038
effective search space used: 4733708038
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)