BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035901
(415 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6F6B5|ARC3_ARATH Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3
OS=Arabidopsis thaliana GN=ARC3 PE=1 SV=2
Length = 741
Score = 270 bits (690), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 183/422 (43%), Positives = 250/422 (59%), Gaps = 41/422 (9%)
Query: 1 VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKL 60
V +LA KLQ H NF IDID + LL+KD VTLDEAL+ ANNAV +A+NA S L S MH
Sbjct: 193 VNELARKLQQHTNFCIDIDIEVLLQKDLVTLDEALRNANNAVSMAINAASALISGMHGNF 252
Query: 61 IDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAIYDCPFIGAGVKELNGM 120
ID++H ++KEL+ SE+ IL +YKEAK+GFG G N+KTSIL+AIYDCPF G+K+LN
Sbjct: 253 IDVMHKDLKELEGSEVKTILESYKEAKVGFGVGHNLKTSILRAIYDCPFFRPGLKDLNA- 311
Query: 121 VICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVE- 179
+IC+VA+S + D+++ L TFRQ EYTG+ IVS VHEP+LEP + VTT L E
Sbjct: 312 IICIVASSVPLQKKDVKTILRTFRQTMEYTGDIIVSTVHEPDLEPKVRVTTFFILSSSEV 371
Query: 180 QASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIENKI 239
+ S K +IFS L PFV N+ R Q + N VS + D++++ K
Sbjct: 372 ETSNKGNIFSGLV---PFVLNIFTRYRSQLQ-KETNIGLGETPVS-IKDSADSTDV--KT 424
Query: 240 SNESVSEGFYNYSNDAPTLLTDYNNIDASSRSGQSEAEFYESRTEPS-----NLYDQIVE 294
SN+++ E + D+ LL N D ++E+ EPS +L D+ VE
Sbjct: 425 SNQNIEE----FEIDSEDLLEVSENGD--------DSEYPLKEGEPSRNSRLDLKDENVE 472
Query: 295 G-TPFQRELLNSWNLGPGYQIAQQWAKERSADSRASTMIDNLGIFCLPVGVRASEELDFF 353
QRE + +W++ GYQI Q+W ADS T + +LGI LPVGVR S++L+
Sbjct: 473 DFGAIQREPIANWSMDQGYQIEQKW----QADS-GDTAVLSLGIVNLPVGVRPSKKLNSN 527
Query: 354 CSQQQEPKTENDVKEP----PTGASFDVMRDFYSTAATLLKGKTADVRKKQGVLSTRAAS 409
S + + D +E P G++ +D TA+TLL K AD K++ LS RA+S
Sbjct: 528 LSVASQLSRKADSREESFFNPNGST----KDSSDTASTLLSEKYADFTKQRN-LSARASS 582
Query: 410 ML 411
ML
Sbjct: 583 ML 584
>sp|P38356|BSD2_YEAST Metal homeostatis protein BSD2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BSD2 PE=1 SV=1
Length = 321
Score = 36.2 bits (82), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 177 LVEQASRKSSIFSRLAHHFPFVFNLLRRNHQQSNDTQGNSEFDNACVSEVIGPPDTSEIE 236
L EQA+R ++ HF + L ++ QQS+D Q + FD S + PDT+E E
Sbjct: 74 LREQAARH---IGKIGRHFNILDRLFKKRTQQSSDIQQGAMFD-GVFSNLSAKPDTTETE 129
>sp|Q83F12|FTSZ_COXBU Cell division protein FtsZ OS=Coxiella burnetii (strain RSA 493 /
Nine Mile phase I) GN=ftsZ PE=1 SV=1
Length = 386
Score = 33.1 bits (74), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 83/189 (43%), Gaps = 25/189 (13%)
Query: 8 LQDHINFYIDIDTDRLLE--KDSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVH 65
L ++++ I I ++LL ++TL A K ANN + AV I+ L + LI++
Sbjct: 154 LGNYVDSLITIPNNKLLNVLGKNITLLNAFKAANNVLLGAVQGIADLIT--RPGLINVDF 211
Query: 66 SNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQA------IYDCPFIGAGVKELNG 119
++V+ + ++G G +G N +A + D F GA G
Sbjct: 212 ADVRTVMSEMGMAMMGT------GVSSGENRAREAAEAAIASPLLEDVDFTGA-----RG 260
Query: 120 MVICVVATSNI-IGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLV 178
+++ + A ++ IG + + + T ++ V +P++ +L VT VVT GL
Sbjct: 261 VLVNITAGMDLSIG--EFEQVGEAVKAFASETATVVIGTVIDPDMSDELRVTVVVT-GLG 317
Query: 179 EQASRKSSI 187
A + +
Sbjct: 318 SHAGGGAGV 326
>sp|P72079|FTSZ_NEIGO Cell division protein FtsZ OS=Neisseria gonorrhoeae GN=ftsZ PE=3
SV=1
Length = 392
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 74/181 (40%), Gaps = 14/181 (7%)
Query: 7 KLQDHINFYIDIDTDRLLEK--DSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIV 64
+L++H++ I I D+L+ + VT+ EA + A+N + AV IS + +
Sbjct: 155 QLKEHVDSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVT---------C 205
Query: 65 HSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSIL---QAIYDCPFIGAGVKELNGMV 121
S + L +++ ++ N A +G G I + + QAI + G++
Sbjct: 206 PSEIINLDFADVKTVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVL 265
Query: 122 ICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQA 181
+ + + ++L + Q E + + D + T++ GL E+
Sbjct: 266 VNITTAPGCLKMSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKG 325
Query: 182 S 182
+
Sbjct: 326 A 326
>sp|P0A0S6|FTSZ_NEIMB Cell division protein FtsZ OS=Neisseria meningitidis serogroup B
(strain MC58) GN=ftsZ PE=3 SV=1
Length = 392
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 74/181 (40%), Gaps = 14/181 (7%)
Query: 7 KLQDHINFYIDIDTDRLLEK--DSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIV 64
+L++H++ I I D+L+ + VT+ EA + A+N + AV IS + +
Sbjct: 155 QLKEHVDSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVT---------C 205
Query: 65 HSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSIL---QAIYDCPFIGAGVKELNGMV 121
S + L +++ ++ N A +G G I + + QAI + G++
Sbjct: 206 PSEIINLDFADVKTVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVL 265
Query: 122 ICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQA 181
+ + + ++L + Q E + + D + T++ GL E+
Sbjct: 266 VNITTAPGCLKMSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKG 325
Query: 182 S 182
+
Sbjct: 326 A 326
>sp|P0A0S5|FTSZ_NEIMA Cell division protein FtsZ OS=Neisseria meningitidis serogroup A /
serotype 4A (strain Z2491) GN=ftsZ PE=3 SV=1
Length = 392
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 74/181 (40%), Gaps = 14/181 (7%)
Query: 7 KLQDHINFYIDIDTDRLLEK--DSVTLDEALKTANNAVFLAVNAISTLSSDMHRKLIDIV 64
+L++H++ I I D+L+ + VT+ EA + A+N + AV IS + +
Sbjct: 155 QLKEHVDSLIIIPNDKLMTALGEDVTMREAFRAADNVLRDAVAGISEVVT---------C 205
Query: 65 HSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSIL---QAIYDCPFIGAGVKELNGMV 121
S + L +++ ++ N A +G G I + + QAI + G++
Sbjct: 206 PSEIINLDFADVKTVMSNRGIAMMGSGYAQGIDRARMATDQAISSPLLDDVTLDGARGVL 265
Query: 122 ICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLLVTTVVTLGLVEQA 181
+ + + ++L + Q E + + D + T++ GL E+
Sbjct: 266 VNITTAPGCLKMSELSEVMKIVNQSAHPDLECKFGAAEDETMSEDAIRITIIATGLKEKG 325
Query: 182 S 182
+
Sbjct: 326 A 326
>sp|A7GRP5|Y2569_BACCN UPF0747 protein Bcer98_2569 OS=Bacillus cereus subsp. cytotoxis
(strain NVH 391-98) GN=Bcer98_2569 PE=3 SV=1
Length = 538
Score = 32.3 bits (72), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 31 LDEALKTANNAVFLAVNAISTLSSDMHRKLIDIVHSNVKELKVSEIFKILGNYKEAK 87
+ EAL+ ++ V I+ L +D L+D H N+++L+VS +I+ YKE +
Sbjct: 199 IQEALEESSTYVDFFARLITKLFADTGLILVDSHHPNLRKLEVSFFKRIISQYKEVQ 255
>sp|Q5GTB4|PYRG_WOLTR CTP synthase OS=Wolbachia sp. subsp. Brugia malayi (strain TRS)
GN=pyrG PE=3 SV=1
Length = 539
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 82/199 (41%), Gaps = 27/199 (13%)
Query: 109 FIGAGVKELNGMVICVVATSNIIGNNDLQSFLHTFRQITEYTGETIVSFVHEPNLEPDLL 168
FI G + L+ VIC + + +G+ + Q FL RQI+ G+ V +H
Sbjct: 127 FIFNGTEGLD-FVICEIGGT--VGDIESQPFLEAIRQISYKLGKQRVILIH--------- 174
Query: 169 VTTVVTLGLVEQASRKSSIFSRLAHHF----PFVFNLLRRNHQQSNDTQGN-SEFDNACV 223
+T V L + ++ K + S +F P + L R + S++ +G + N +
Sbjct: 175 LTLVPYLAVAQELKTKPTQHSVRELNFVGLQPDII-LCRSEKEISDNQRGKIANLCNVSL 233
Query: 224 SEVIGPPDTSEI-ENKISNESVSEG-----FYNYSNDAPTLLTDYNNIDASSRSGQSE-- 275
S VI PD S I E + G ++ S P+L+ +N I S R E
Sbjct: 234 SNVISAPDVSHIYELPVLYNQCGLGTQVLEHFHLSKPKPSLV-GWNQIVHSMRHPMQEVT 292
Query: 276 AEFYESRTEPSNLYDQIVE 294
TE + Y +VE
Sbjct: 293 VSIVGKYTEFPDTYKSLVE 311
>sp|O23401|U84A3_ARATH UDP-glycosyltransferase 84A3 OS=Arabidopsis thaliana GN=UGT84A3
PE=1 SV=1
Length = 479
Score = 32.0 bits (71), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Query: 1 VKDLAAKLQDHINFYIDIDTDRLLEKDSVTLDEALKTANNAVFLAVNAI----STLSSDM 56
+ D + ++H +FY+ IDT R LEKD +D + A+ V + TLSSD+
Sbjct: 202 ILDQLKRFENHKSFYLFIDTFRELEKD--IMDHMSQLCPQAIISPVGPLFKMAQTLSSDV 259
Query: 57 HRKLIDIVHSNVKELKVSEIFKILGNYKEAKIGFGAGSNIKTSILQAI 104
+ + ++ L E ++ I FG +N+K ++ I
Sbjct: 260 KGDISEPASDCMEWLDSREPSSVV------YISFGTIANLKQEQMEEI 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,113,911
Number of Sequences: 539616
Number of extensions: 6059885
Number of successful extensions: 16383
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 16376
Number of HSP's gapped (non-prelim): 16
length of query: 415
length of database: 191,569,459
effective HSP length: 120
effective length of query: 295
effective length of database: 126,815,539
effective search space: 37410584005
effective search space used: 37410584005
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)