Query 035902
Match_columns 381
No_of_seqs 168 out of 2304
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 12:28:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a9w_A Monooxygenase; baeyer-v 100.0 1.4E-42 4.6E-47 318.0 29.2 341 1-379 1-354 (357)
2 2xve_A Flavin-containing monoo 100.0 1.2E-41 4.1E-46 321.1 30.1 306 1-376 1-340 (464)
3 3gwf_A Cyclohexanone monooxyge 100.0 8.1E-41 2.8E-45 319.8 26.1 363 3-377 8-457 (540)
4 4ap3_A Steroid monooxygenase; 100.0 8.6E-40 2.9E-44 313.3 27.0 363 3-376 21-470 (549)
5 3uox_A Otemo; baeyer-villiger 100.0 3.3E-40 1.1E-44 315.9 22.3 360 3-376 9-465 (545)
6 1w4x_A Phenylacetone monooxyge 100.0 5.9E-39 2E-43 308.7 25.1 362 3-378 16-467 (542)
7 3fbs_A Oxidoreductase; structu 100.0 1.3E-38 4.3E-43 284.2 21.1 285 2-380 1-295 (297)
8 2gv8_A Monooxygenase; FMO, FAD 100.0 5.7E-38 2E-42 295.5 26.4 303 2-376 5-361 (447)
9 3f8d_A Thioredoxin reductase ( 100.0 1.6E-38 5.6E-43 286.9 21.8 286 3-379 15-319 (323)
10 2q7v_A Thioredoxin reductase; 100.0 4.9E-38 1.7E-42 284.1 23.5 290 3-380 8-315 (325)
11 2q0l_A TRXR, thioredoxin reduc 100.0 2.9E-38 9.9E-43 283.9 21.3 287 4-379 2-311 (311)
12 3lzw_A Ferredoxin--NADP reduct 100.0 1.8E-38 6.1E-43 287.8 19.6 291 3-379 7-317 (332)
13 4gcm_A TRXR, thioredoxin reduc 100.0 2E-38 6.8E-43 285.0 19.7 287 1-378 2-307 (312)
14 4a5l_A Thioredoxin reductase; 100.0 9.6E-39 3.3E-43 287.4 17.4 295 1-379 1-314 (314)
15 4fk1_A Putative thioredoxin re 100.0 3.6E-38 1.2E-42 282.1 18.0 286 1-378 4-301 (304)
16 3itj_A Thioredoxin reductase 1 100.0 4.6E-38 1.6E-42 285.8 18.9 292 3-379 22-337 (338)
17 2zbw_A Thioredoxin reductase; 100.0 1.7E-37 5.9E-42 281.7 22.6 296 2-379 4-319 (335)
18 3r9u_A Thioredoxin reductase; 100.0 1.7E-37 5.7E-42 279.3 21.5 293 3-379 4-314 (315)
19 1fl2_A Alkyl hydroperoxide red 100.0 4.9E-37 1.7E-41 275.7 21.1 290 3-380 1-308 (310)
20 3cty_A Thioredoxin reductase; 100.0 6.8E-37 2.3E-41 275.9 21.7 286 3-379 16-318 (319)
21 1vdc_A NTR, NADPH dependent th 100.0 5.3E-37 1.8E-41 278.3 20.8 288 3-379 8-325 (333)
22 3d1c_A Flavin-containing putat 100.0 3E-36 1E-40 277.2 25.4 310 1-377 2-339 (369)
23 1trb_A Thioredoxin reductase; 100.0 3.4E-37 1.2E-41 278.0 18.7 292 1-379 3-316 (320)
24 3ab1_A Ferredoxin--NADP reduct 100.0 1.2E-36 4E-41 279.0 21.5 296 2-379 13-330 (360)
25 2a87_A TRXR, TR, thioredoxin r 100.0 5.9E-37 2E-41 278.1 19.1 286 3-378 14-317 (335)
26 4eqs_A Coenzyme A disulfide re 100.0 7.4E-38 2.5E-42 293.0 10.7 291 4-375 1-311 (437)
27 1hyu_A AHPF, alkyl hydroperoxi 100.0 2.3E-35 8E-40 281.9 24.4 289 3-379 212-518 (521)
28 3iwa_A FAD-dependent pyridine 100.0 6.8E-36 2.3E-40 283.3 15.6 299 1-376 1-330 (472)
29 3ics_A Coenzyme A-disulfide re 100.0 6.7E-36 2.3E-40 290.8 15.8 291 1-374 34-352 (588)
30 3oc4_A Oxidoreductase, pyridin 100.0 4.2E-35 1.5E-39 276.2 20.6 287 1-375 1-314 (452)
31 1mo9_A ORF3; nucleotide bindin 100.0 2.8E-35 9.7E-40 281.9 18.6 302 3-375 43-378 (523)
32 3urh_A Dihydrolipoyl dehydroge 100.0 1.5E-35 5E-40 282.3 16.2 310 1-376 23-364 (491)
33 1ojt_A Surface protein; redox- 100.0 1E-34 3.4E-39 275.7 21.8 304 3-375 6-349 (482)
34 2a8x_A Dihydrolipoyl dehydroge 100.0 1.3E-35 4.4E-40 280.8 15.5 305 1-374 1-333 (464)
35 2wpf_A Trypanothione reductase 100.0 3.4E-35 1.2E-39 279.3 18.3 307 1-375 4-355 (495)
36 1zmd_A Dihydrolipoyl dehydroge 100.0 3.4E-35 1.2E-39 278.6 17.8 305 3-375 6-345 (474)
37 1xhc_A NADH oxidase /nitrite r 100.0 1.7E-36 5.7E-41 277.6 8.5 275 4-375 9-297 (367)
38 3kd9_A Coenzyme A disulfide re 100.0 2.9E-35 1E-39 277.2 17.0 285 1-375 1-315 (449)
39 3l8k_A Dihydrolipoyl dehydroge 100.0 3.1E-35 1E-39 278.1 16.8 302 1-375 1-333 (466)
40 3klj_A NAD(FAD)-dependent dehy 100.0 7.2E-37 2.5E-41 281.3 5.5 272 3-376 9-295 (385)
41 2eq6_A Pyruvate dehydrogenase 100.0 4.8E-35 1.6E-39 276.5 17.9 300 1-375 4-334 (464)
42 3ntd_A FAD-dependent pyridine 100.0 8.6E-36 2.9E-40 289.1 13.1 290 4-376 2-339 (565)
43 1onf_A GR, grase, glutathione 100.0 3.4E-35 1.2E-39 279.9 15.9 302 2-374 1-370 (500)
44 1xdi_A RV3303C-LPDA; reductase 100.0 9.3E-35 3.2E-39 277.1 18.8 310 2-375 1-342 (499)
45 2bc0_A NADH oxidase; flavoprot 100.0 2.4E-35 8.1E-40 280.5 14.7 287 3-375 35-361 (490)
46 1dxl_A Dihydrolipoamide dehydr 100.0 7.9E-35 2.7E-39 276.0 17.8 306 3-375 6-342 (470)
47 2hqm_A GR, grase, glutathione 100.0 1.1E-34 3.9E-39 275.0 17.5 301 3-375 11-347 (479)
48 1ebd_A E3BD, dihydrolipoamide 100.0 1.2E-34 4.1E-39 273.5 17.5 303 3-375 3-333 (455)
49 1v59_A Dihydrolipoamide dehydr 100.0 9.9E-35 3.4E-39 275.8 16.9 300 3-375 5-350 (478)
50 1ges_A Glutathione reductase; 100.0 6.1E-35 2.1E-39 274.7 15.2 300 1-375 1-328 (450)
51 2r9z_A Glutathione amide reduc 100.0 2.4E-34 8.2E-39 271.5 18.4 299 1-375 1-327 (463)
52 2qae_A Lipoamide, dihydrolipoy 100.0 3.1E-34 1.1E-38 271.6 19.1 306 3-375 2-340 (468)
53 3dk9_A Grase, GR, glutathione 100.0 5.6E-35 1.9E-39 277.4 14.0 299 3-375 20-356 (478)
54 1zk7_A HGII, reductase, mercur 100.0 3.8E-35 1.3E-39 277.8 12.1 305 1-375 1-334 (467)
55 4dna_A Probable glutathione re 100.0 9.5E-35 3.2E-39 274.7 14.1 297 3-375 5-331 (463)
56 3lad_A Dihydrolipoamide dehydr 100.0 2.8E-34 9.7E-39 272.6 17.0 308 2-376 2-344 (476)
57 1fec_A Trypanothione reductase 100.0 2.7E-34 9.2E-39 272.9 16.7 307 1-375 1-351 (490)
58 3ef6_A Toluene 1,2-dioxygenase 100.0 2.3E-34 7.8E-39 267.7 15.9 284 1-376 1-310 (410)
59 3o0h_A Glutathione reductase; 100.0 2E-34 6.7E-39 273.9 14.7 298 3-375 26-351 (484)
60 2yqu_A 2-oxoglutarate dehydrog 100.0 2.9E-34 1E-38 270.8 15.6 301 3-375 1-327 (455)
61 3lxd_A FAD-dependent pyridine 100.0 2.6E-34 8.9E-39 268.1 14.9 284 3-376 9-322 (415)
62 3ic9_A Dihydrolipoamide dehydr 100.0 2E-35 6.8E-40 280.8 7.0 300 4-375 9-338 (492)
63 2gqw_A Ferredoxin reductase; f 100.0 8.8E-34 3E-38 263.5 17.0 280 3-377 7-310 (408)
64 4b1b_A TRXR, thioredoxin reduc 100.0 8.2E-35 2.8E-39 276.8 9.8 308 4-376 43-385 (542)
65 2cdu_A NADPH oxidase; flavoenz 100.0 6E-34 2.1E-38 268.5 15.4 289 4-375 1-317 (452)
66 1lvl_A Dihydrolipoamide dehydr 100.0 3.9E-33 1.3E-37 263.0 19.5 297 2-375 4-330 (458)
67 2vdc_G Glutamate synthase [NAD 100.0 4.1E-34 1.4E-38 267.9 11.3 274 3-378 122-445 (456)
68 1nhp_A NADH peroxidase; oxidor 100.0 2.1E-33 7.1E-38 264.4 16.0 286 4-375 1-316 (447)
69 2v3a_A Rubredoxin reductase; a 100.0 2.3E-33 8E-38 259.0 16.0 283 1-375 1-306 (384)
70 3qfa_A Thioredoxin reductase 1 100.0 1.1E-33 3.7E-38 270.5 14.1 304 3-375 32-380 (519)
71 3dgh_A TRXR-1, thioredoxin red 100.0 7.7E-33 2.6E-37 263.0 19.7 302 3-375 9-352 (483)
72 3dgz_A Thioredoxin reductase 2 100.0 1.4E-33 4.8E-38 268.3 14.2 305 3-376 6-353 (488)
73 3fg2_P Putative rubredoxin red 100.0 7.5E-34 2.6E-38 264.0 11.8 282 4-376 2-311 (404)
74 1q1r_A Putidaredoxin reductase 100.0 7.7E-34 2.6E-38 265.6 11.4 285 3-376 4-320 (431)
75 3cgb_A Pyridine nucleotide-dis 100.0 3E-33 1E-37 265.3 15.1 288 4-375 37-353 (480)
76 3s5w_A L-ornithine 5-monooxyge 100.0 9.8E-32 3.4E-36 254.5 21.7 344 4-373 31-445 (463)
77 3h8l_A NADH oxidase; membrane 100.0 1.3E-32 4.5E-37 256.2 11.8 283 4-376 2-335 (409)
78 3sx6_A Sulfide-quinone reducta 100.0 1.8E-32 6.2E-37 257.2 12.4 293 1-380 1-347 (437)
79 4b63_A L-ornithine N5 monooxyg 100.0 9.8E-31 3.3E-35 248.6 22.2 341 4-354 40-457 (501)
80 4g6h_A Rotenone-insensitive NA 100.0 9.6E-33 3.3E-37 261.9 7.7 286 3-375 42-399 (502)
81 2x8g_A Thioredoxin glutathione 100.0 5.9E-31 2E-35 256.4 19.5 302 3-375 107-459 (598)
82 1lqt_A FPRA; NADP+ derivative, 100.0 5E-32 1.7E-36 254.2 10.3 291 1-378 1-388 (456)
83 1gte_A Dihydropyrimidine dehyd 100.0 1.1E-30 3.8E-35 267.1 11.6 277 3-377 187-508 (1025)
84 1m6i_A Programmed cell death p 100.0 2.7E-31 9.4E-36 252.3 6.6 301 2-377 10-354 (493)
85 1cjc_A Protein (adrenodoxin re 100.0 3.2E-30 1.1E-34 242.2 11.2 305 3-378 6-396 (460)
86 3k30_A Histamine dehydrogenase 100.0 3.2E-30 1.1E-34 254.5 7.5 266 3-378 391-676 (690)
87 3h28_A Sulfide-quinone reducta 100.0 1.3E-30 4.5E-35 244.1 4.3 288 2-380 1-336 (430)
88 2gag_A Heterotetrameric sarcos 100.0 1.4E-28 4.7E-33 250.0 18.2 279 3-377 128-444 (965)
89 1o94_A Tmadh, trimethylamine d 100.0 1.4E-29 4.9E-34 250.8 10.3 277 3-379 389-702 (729)
90 3vrd_B FCCB subunit, flavocyto 100.0 3.2E-29 1.1E-33 232.9 10.8 288 4-380 3-327 (401)
91 3hyw_A Sulfide-quinone reducta 100.0 5.5E-30 1.9E-34 239.6 0.8 288 1-379 1-335 (430)
92 1ps9_A 2,4-dienoyl-COA reducta 99.9 4E-28 1.4E-32 239.0 12.8 287 3-372 373-671 (671)
93 1y56_A Hypothetical protein PH 99.9 1.3E-26 4.5E-31 220.1 10.6 253 3-376 108-376 (493)
94 3fpz_A Thiazole biosynthetic e 99.7 4.2E-21 1.4E-25 172.9 -11.6 150 3-202 65-216 (326)
95 2ywl_A Thioredoxin reductase r 99.7 2E-17 6.8E-22 135.7 9.0 160 171-378 3-172 (180)
96 2cul_A Glucose-inhibited divis 99.7 6.7E-17 2.3E-21 138.0 10.7 131 1-148 1-133 (232)
97 2e5v_A L-aspartate oxidase; ar 99.6 3.3E-16 1.1E-20 147.6 5.6 304 5-376 1-368 (472)
98 2gqf_A Hypothetical protein HI 99.6 9.5E-16 3.3E-20 141.3 4.8 186 1-197 2-259 (401)
99 2ywl_A Thioredoxin reductase r 99.5 3E-13 1E-17 110.5 10.4 118 4-149 2-119 (180)
100 3ces_A MNMG, tRNA uridine 5-ca 99.4 2.1E-13 7.3E-18 130.6 9.1 171 3-200 28-221 (651)
101 3oz2_A Digeranylgeranylglycero 99.4 7.2E-13 2.4E-17 122.2 12.3 138 1-142 2-164 (397)
102 3cgv_A Geranylgeranyl reductas 99.4 1E-12 3.5E-17 121.4 11.9 137 1-141 2-163 (397)
103 3v76_A Flavoprotein; structura 99.4 1.5E-12 5.1E-17 120.4 12.3 129 3-140 27-187 (417)
104 1rp0_A ARA6, thiazole biosynth 99.3 1.2E-11 4E-16 108.7 12.6 141 3-144 39-195 (284)
105 3nix_A Flavoprotein/dehydrogen 99.3 5.5E-12 1.9E-16 117.4 10.7 138 3-143 5-169 (421)
106 2zxi_A TRNA uridine 5-carboxym 99.3 2.4E-12 8.3E-17 122.9 7.7 172 3-201 27-221 (637)
107 1yvv_A Amine oxidase, flavin-c 99.3 2.9E-11 1E-15 108.9 12.8 130 2-139 1-161 (336)
108 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 6.4E-12 2.2E-16 113.6 8.4 129 4-139 2-164 (342)
109 3alj_A 2-methyl-3-hydroxypyrid 99.3 9.1E-12 3.1E-16 114.3 9.4 131 1-143 9-163 (379)
110 2bry_A NEDD9 interacting prote 99.3 3.4E-12 1.2E-16 121.0 6.3 143 3-147 92-237 (497)
111 3i3l_A Alkylhalidase CMLS; fla 99.3 4.5E-11 1.5E-15 115.2 14.0 138 1-141 21-189 (591)
112 3fmw_A Oxygenase; mithramycin, 99.3 4.7E-11 1.6E-15 114.9 13.9 134 3-140 49-207 (570)
113 3cp8_A TRNA uridine 5-carboxym 99.3 5.2E-12 1.8E-16 121.0 6.7 172 3-201 21-216 (641)
114 3ihg_A RDME; flavoenzyme, anth 99.2 7E-11 2.4E-15 113.4 14.4 136 3-142 5-185 (535)
115 2i0z_A NAD(FAD)-utilizing dehy 99.2 1.1E-11 3.8E-16 116.1 8.6 132 3-140 26-191 (447)
116 3rp8_A Flavoprotein monooxygen 99.2 1.4E-11 4.7E-16 114.2 8.8 134 2-144 22-185 (407)
117 2qa1_A PGAE, polyketide oxygen 99.2 2E-11 6.9E-16 115.8 10.0 135 3-141 11-166 (500)
118 2qa2_A CABE, polyketide oxygen 99.2 3.4E-11 1.2E-15 114.2 10.4 135 3-141 12-167 (499)
119 2xdo_A TETX2 protein; tetracyc 99.2 4.6E-11 1.6E-15 110.3 11.0 135 2-145 25-187 (398)
120 3nlc_A Uncharacterized protein 99.2 3.8E-11 1.3E-15 114.2 10.0 131 4-140 108-277 (549)
121 3atr_A Conserved archaeal prot 99.2 5E-11 1.7E-15 112.0 10.7 140 3-145 6-167 (453)
122 2gmh_A Electron transfer flavo 99.2 2E-10 6.8E-15 111.0 14.9 139 3-141 35-218 (584)
123 3e1t_A Halogenase; flavoprotei 99.2 1.8E-10 6.2E-15 109.8 14.1 139 3-144 7-176 (512)
124 3c96_A Flavin-containing monoo 99.2 2.5E-10 8.4E-15 105.8 14.5 139 1-142 2-171 (410)
125 3dme_A Conserved exported prot 99.2 5.4E-11 1.9E-15 108.5 9.8 61 75-139 148-208 (369)
126 1k0i_A P-hydroxybenzoate hydro 99.2 3.4E-11 1.2E-15 111.1 8.1 140 2-145 1-168 (394)
127 2r0c_A REBC; flavin adenine di 99.2 3.6E-10 1.2E-14 108.6 15.3 134 3-141 26-197 (549)
128 2vou_A 2,6-dihydroxypyridine h 99.2 1.4E-10 4.8E-15 107.0 11.9 132 2-142 4-155 (397)
129 2x3n_A Probable FAD-dependent 99.2 7E-11 2.4E-15 109.1 9.6 133 3-142 6-168 (399)
130 3dje_A Fructosyl amine: oxygen 99.2 1.9E-10 6.4E-15 107.6 12.1 57 76-139 160-220 (438)
131 1y0p_A Fumarate reductase flav 99.1 6.5E-10 2.2E-14 107.4 15.5 138 3-141 126-318 (571)
132 2qcu_A Aerobic glycerol-3-phos 99.1 5.3E-10 1.8E-14 106.2 14.5 63 75-139 147-209 (501)
133 2uzz_A N-methyl-L-tryptophan o 99.1 2.9E-10 1E-14 103.8 12.1 56 76-139 148-203 (372)
134 3da1_A Glycerol-3-phosphate de 99.1 7.9E-10 2.7E-14 106.3 14.6 64 75-139 168-231 (561)
135 3ps9_A TRNA 5-methylaminomethy 99.1 4.6E-10 1.6E-14 110.7 12.3 58 75-139 415-472 (676)
136 1qo8_A Flavocytochrome C3 fuma 99.1 1E-09 3.5E-14 105.8 14.0 138 3-141 121-313 (566)
137 2dkh_A 3-hydroxybenzoate hydro 99.1 9.1E-10 3.1E-14 107.6 12.6 139 3-141 32-212 (639)
138 3jsk_A Cypbp37 protein; octame 99.1 1.2E-09 3.9E-14 97.1 11.8 139 3-141 79-252 (344)
139 3pvc_A TRNA 5-methylaminomethy 99.1 1.5E-09 5E-14 107.2 13.8 58 75-139 410-468 (689)
140 1y56_B Sarcosine oxidase; dehy 99.0 1.3E-09 4.3E-14 100.0 12.4 57 75-139 147-204 (382)
141 2oln_A NIKD protein; flavoprot 99.0 1.4E-09 4.6E-14 100.4 12.6 56 76-139 152-207 (397)
142 1ryi_A Glycine oxidase; flavop 99.0 8.1E-10 2.8E-14 101.3 10.7 60 73-140 160-219 (382)
143 2gf3_A MSOX, monomeric sarcosi 99.0 2.1E-09 7.2E-14 98.7 12.9 56 76-139 149-204 (389)
144 3nyc_A D-arginine dehydrogenas 99.0 1.2E-09 4E-14 100.1 10.5 57 75-139 152-208 (381)
145 4hb9_A Similarities with proba 99.0 9.3E-10 3.2E-14 101.8 9.7 130 4-142 2-168 (412)
146 2aqj_A Tryptophan halogenase, 99.0 8.2E-10 2.8E-14 105.9 9.2 63 74-142 162-224 (538)
147 2gjc_A Thiazole biosynthetic e 99.0 3.8E-09 1.3E-13 93.3 12.6 139 3-141 65-240 (326)
148 1pn0_A Phenol 2-monooxygenase; 99.0 8.4E-09 2.9E-13 101.1 16.1 140 3-142 8-232 (665)
149 4at0_A 3-ketosteroid-delta4-5a 99.0 4.7E-09 1.6E-13 99.9 13.8 61 78-140 203-264 (510)
150 2gag_B Heterotetrameric sarcos 99.0 3.1E-09 1.1E-13 98.1 11.6 58 75-139 172-229 (405)
151 1d4d_A Flavocytochrome C fumar 99.0 1.7E-08 5.8E-13 97.4 16.7 138 3-141 126-318 (572)
152 2e4g_A Tryptophan halogenase; 98.9 5.5E-09 1.9E-13 100.4 12.3 63 74-142 191-254 (550)
153 2weu_A Tryptophan 5-halogenase 98.9 2.4E-09 8.2E-14 102.1 8.5 63 74-142 170-232 (511)
154 3kkj_A Amine oxidase, flavin-c 98.9 1.5E-09 5.1E-14 94.8 6.5 43 2-44 1-43 (336)
155 2wdq_A Succinate dehydrogenase 98.9 1.9E-08 6.5E-13 97.1 14.7 137 3-139 7-205 (588)
156 3k7m_X 6-hydroxy-L-nicotine ox 98.9 8.8E-09 3E-13 96.0 11.8 37 4-40 2-38 (431)
157 2pyx_A Tryptophan halogenase; 98.9 7.8E-09 2.7E-13 98.8 11.5 63 74-142 172-235 (526)
158 2yqu_A 2-oxoglutarate dehydrog 98.9 7.8E-09 2.7E-13 97.0 11.2 101 4-144 168-268 (455)
159 3c4n_A Uncharacterized protein 98.9 2.2E-09 7.5E-14 99.2 6.8 35 4-38 37-73 (405)
160 2v3a_A Rubredoxin reductase; a 98.9 9.8E-09 3.4E-13 94.1 11.1 101 3-142 145-245 (384)
161 3ka7_A Oxidoreductase; structu 98.9 8.3E-09 2.8E-13 95.9 10.5 38 4-41 1-38 (425)
162 3axb_A Putative oxidoreductase 98.9 4.3E-09 1.5E-13 98.7 8.1 36 1-36 21-57 (448)
163 1v59_A Dihydrolipoamide dehydr 98.8 3.4E-08 1.2E-12 93.3 14.1 107 4-143 184-290 (478)
164 2eq6_A Pyruvate dehydrogenase 98.8 1.8E-08 6.1E-13 94.8 12.1 106 4-144 170-275 (464)
165 3nrn_A Uncharacterized protein 98.8 6E-09 2.1E-13 96.8 8.6 38 4-41 1-38 (421)
166 2rgh_A Alpha-glycerophosphate 98.8 3.2E-08 1.1E-12 95.3 13.7 63 76-139 187-249 (571)
167 2bs2_A Quinol-fumarate reducta 98.8 3.3E-08 1.1E-12 96.3 13.5 64 76-140 157-220 (660)
168 1kf6_A Fumarate reductase flav 98.8 3.7E-08 1.3E-12 95.3 13.8 137 3-140 5-197 (602)
169 1ebd_A E3BD, dihydrolipoamide 98.8 3.2E-08 1.1E-12 92.9 13.0 104 4-144 171-274 (455)
170 1chu_A Protein (L-aspartate ox 98.8 1.3E-08 4.6E-13 97.2 9.7 137 3-140 8-208 (540)
171 2h88_A Succinate dehydrogenase 98.8 3.8E-08 1.3E-12 95.3 12.8 137 3-140 18-217 (621)
172 1ges_A Glutathione reductase; 98.8 2.6E-08 8.7E-13 93.3 11.3 101 4-143 168-268 (450)
173 2r9z_A Glutathione amide reduc 98.8 2.7E-08 9.4E-13 93.4 11.5 100 4-143 167-267 (463)
174 1pj5_A N,N-dimethylglycine oxi 98.8 4.1E-08 1.4E-12 99.0 12.7 58 75-139 149-206 (830)
175 3i6d_A Protoporphyrinogen oxid 98.8 7.4E-09 2.5E-13 97.6 6.7 38 3-40 5-48 (470)
176 1nhp_A NADH peroxidase; oxidor 98.8 1.9E-08 6.4E-13 94.2 9.2 104 3-146 149-252 (447)
177 3urh_A Dihydrolipoyl dehydroge 98.8 9E-08 3.1E-12 90.7 13.8 106 4-144 199-304 (491)
178 3lxd_A FAD-dependent pyridine 98.7 6.4E-08 2.2E-12 89.7 11.9 102 3-142 152-253 (415)
179 1zmd_A Dihydrolipoyl dehydroge 98.7 9.6E-08 3.3E-12 90.1 13.1 108 4-144 179-286 (474)
180 1lvl_A Dihydrolipoamide dehydr 98.7 3.3E-08 1.1E-12 92.8 9.8 101 4-144 172-272 (458)
181 1onf_A GR, grase, glutathione 98.7 8.1E-08 2.8E-12 91.2 12.4 101 4-143 177-278 (500)
182 3nks_A Protoporphyrinogen oxid 98.7 3.7E-08 1.3E-12 93.0 9.6 40 2-41 1-42 (477)
183 1zk7_A HGII, reductase, mercur 98.7 8.8E-08 3E-12 90.2 12.0 98 4-143 177-274 (467)
184 1dxl_A Dihydrolipoamide dehydr 98.7 6.3E-08 2.2E-12 91.2 11.0 106 4-144 178-283 (470)
185 1rp0_A ARA6, thiazole biosynth 98.7 5.6E-09 1.9E-13 91.5 3.5 192 170-380 40-278 (284)
186 3fg2_P Putative rubredoxin red 98.7 6.9E-08 2.4E-12 89.1 10.9 101 4-142 143-243 (404)
187 2a8x_A Dihydrolipoyl dehydroge 98.7 1.3E-07 4.3E-12 89.0 12.8 103 4-144 172-275 (464)
188 4b1b_A TRXR, thioredoxin reduc 98.7 9.3E-08 3.2E-12 91.0 11.5 101 4-145 224-324 (542)
189 2gqw_A Ferredoxin reductase; f 98.7 7.1E-08 2.4E-12 89.1 10.4 96 4-142 146-241 (408)
190 1q1r_A Putidaredoxin reductase 98.7 9.5E-08 3.2E-12 88.9 11.3 101 4-142 150-252 (431)
191 3dgh_A TRXR-1, thioredoxin red 98.7 2E-07 6.9E-12 88.1 13.7 105 4-143 188-292 (483)
192 3ic9_A Dihydrolipoamide dehydr 98.7 3.9E-07 1.3E-11 86.2 15.7 104 4-144 175-278 (492)
193 2qae_A Lipoamide, dihydrolipoy 98.7 1.6E-07 5.4E-12 88.4 12.8 103 4-144 175-280 (468)
194 3s5w_A L-ornithine 5-monooxyge 98.7 1.8E-07 6.2E-12 87.9 13.1 132 3-141 227-378 (463)
195 3ef6_A Toluene 1,2-dioxygenase 98.7 2.5E-08 8.6E-13 92.2 7.1 100 4-142 144-243 (410)
196 1ojt_A Surface protein; redox- 98.7 4.1E-08 1.4E-12 92.8 8.7 104 4-143 186-289 (482)
197 1xdi_A RV3303C-LPDA; reductase 98.7 1.1E-07 3.8E-12 90.3 11.6 101 4-144 183-283 (499)
198 1mo9_A ORF3; nucleotide bindin 98.7 1.1E-07 3.7E-12 90.8 11.3 101 4-143 215-319 (523)
199 3dgz_A Thioredoxin reductase 2 98.7 3E-07 1E-11 87.0 14.2 106 4-144 186-291 (488)
200 1fec_A Trypanothione reductase 98.7 8.8E-08 3E-12 90.6 10.5 101 4-143 188-291 (490)
201 3dk9_A Grase, GR, glutathione 98.7 2.1E-07 7.2E-12 87.8 13.1 107 4-143 188-296 (478)
202 1jnr_A Adenylylsulfate reducta 98.7 1.8E-07 6.3E-12 91.2 13.0 138 3-140 22-218 (643)
203 3iwa_A FAD-dependent pyridine 98.7 1.2E-07 4.1E-12 89.4 11.1 100 4-142 160-260 (472)
204 2wpf_A Trypanothione reductase 98.7 1E-07 3.4E-12 90.3 10.6 101 4-143 192-295 (495)
205 3gyx_A Adenylylsulfate reducta 98.6 5E-08 1.7E-12 95.0 8.5 65 76-140 165-233 (662)
206 3cgb_A Pyridine nucleotide-dis 98.6 7.9E-08 2.7E-12 90.8 9.6 100 3-143 186-285 (480)
207 1xhc_A NADH oxidase /nitrite r 98.6 4.1E-08 1.4E-12 89.3 7.3 93 4-142 144-236 (367)
208 3oc4_A Oxidoreductase, pyridin 98.6 2.6E-07 8.9E-12 86.5 12.9 102 4-145 148-249 (452)
209 2hqm_A GR, grase, glutathione 98.6 1.9E-07 6.6E-12 88.1 11.9 102 4-142 186-287 (479)
210 3c4a_A Probable tryptophan hyd 98.6 6E-09 2E-13 95.5 1.5 119 4-141 1-144 (381)
211 1trb_A Thioredoxin reductase; 98.6 2.1E-07 7.3E-12 82.8 11.4 104 4-143 146-250 (320)
212 2cdu_A NADPH oxidase; flavoenz 98.6 1.6E-07 5.6E-12 87.9 11.1 100 4-143 150-250 (452)
213 3o0h_A Glutathione reductase; 98.6 1.7E-07 6E-12 88.5 11.2 101 4-144 192-292 (484)
214 3lad_A Dihydrolipoamide dehydr 98.6 2.8E-07 9.4E-12 87.0 12.4 103 4-143 181-283 (476)
215 2bc0_A NADH oxidase; flavoprot 98.6 1.3E-07 4.4E-12 89.5 10.0 100 4-143 195-294 (490)
216 2zbw_A Thioredoxin reductase; 98.6 3.1E-07 1E-11 82.4 11.5 103 4-143 153-255 (335)
217 3qfa_A Thioredoxin reductase 1 98.6 8.7E-07 3E-11 84.4 14.6 107 4-144 211-319 (519)
218 3ntd_A FAD-dependent pyridine 98.6 2.5E-07 8.6E-12 89.3 11.1 102 4-143 152-270 (565)
219 1m6i_A Programmed cell death p 98.6 2.6E-07 8.8E-12 87.5 10.7 101 4-143 181-285 (493)
220 4eqs_A Coenzyme A disulfide re 98.6 1E-07 3.4E-12 88.8 7.7 96 4-143 148-243 (437)
221 4dna_A Probable glutathione re 98.5 3.7E-07 1.3E-11 85.8 10.9 101 4-144 171-272 (463)
222 4gut_A Lysine-specific histone 98.5 3E-07 1E-11 91.1 10.2 38 3-40 336-373 (776)
223 4dgk_A Phytoene dehydrogenase; 98.5 8E-08 2.7E-12 91.3 5.3 38 3-40 1-38 (501)
224 3hyw_A Sulfide-quinone reducta 98.5 1.6E-07 5.5E-12 87.3 7.1 103 170-315 3-110 (430)
225 3ics_A Coenzyme A-disulfide re 98.5 3.6E-07 1.2E-11 88.6 9.5 97 4-142 188-284 (588)
226 4gde_A UDP-galactopyranose mut 98.5 1.7E-07 5.7E-12 89.3 6.2 39 4-42 11-50 (513)
227 3d1c_A Flavin-containing putat 98.4 7.2E-07 2.5E-11 81.0 9.3 106 4-142 167-274 (369)
228 3ab1_A Ferredoxin--NADP reduct 98.4 1.4E-06 4.6E-11 79.0 11.1 103 4-143 164-266 (360)
229 3pl8_A Pyranose 2-oxidase; sub 98.4 2.9E-06 9.9E-11 82.4 13.8 39 3-41 46-84 (623)
230 2q7v_A Thioredoxin reductase; 98.4 9.5E-07 3.2E-11 78.8 9.6 100 4-143 153-252 (325)
231 3itj_A Thioredoxin reductase 1 98.4 1.2E-06 4E-11 78.5 10.1 100 4-143 174-274 (338)
232 1fl2_A Alkyl hydroperoxide red 98.4 2.1E-06 7.3E-11 75.9 11.4 100 4-143 145-245 (310)
233 2b9w_A Putative aminooxidase; 98.4 4.5E-07 1.5E-11 84.2 7.0 41 3-43 6-47 (424)
234 3vrd_B FCCB subunit, flavocyto 98.4 4.5E-07 1.5E-11 83.5 6.9 106 168-317 1-111 (401)
235 3sx6_A Sulfide-quinone reducta 98.4 1.1E-06 3.7E-11 81.9 9.3 105 170-317 5-115 (437)
236 3kd9_A Coenzyme A disulfide re 98.4 1.3E-06 4.4E-11 81.7 9.5 98 4-142 149-246 (449)
237 3f8d_A Thioredoxin reductase ( 98.4 1.7E-06 5.9E-11 76.8 10.0 99 4-142 155-253 (323)
238 2q0l_A TRXR, thioredoxin reduc 98.3 1.5E-06 5.1E-11 77.0 9.4 101 4-143 144-244 (311)
239 3lzw_A Ferredoxin--NADP reduct 98.3 2.9E-06 1E-10 75.7 11.4 99 4-143 155-253 (332)
240 3cty_A Thioredoxin reductase; 98.3 2.9E-06 9.9E-11 75.4 11.2 100 4-143 156-255 (319)
241 1rsg_A FMS1 protein; FAD bindi 98.3 3.3E-07 1.1E-11 87.4 5.2 41 2-42 7-48 (516)
242 3klj_A NAD(FAD)-dependent dehy 98.3 9.6E-07 3.3E-11 80.7 8.0 108 168-317 8-119 (385)
243 4g6h_A Rotenone-insensitive NA 98.3 1.8E-06 6.1E-11 81.7 9.8 99 5-141 219-333 (502)
244 2bi7_A UDP-galactopyranose mut 98.3 4E-07 1.4E-11 83.3 5.1 45 1-45 1-45 (384)
245 1vdc_A NTR, NADPH dependent th 98.3 2.1E-06 7.1E-11 76.8 9.6 102 4-143 160-262 (333)
246 2bcg_G Secretory pathway GDP d 98.3 5.5E-07 1.9E-11 84.3 5.9 42 3-44 11-52 (453)
247 3lov_A Protoporphyrinogen oxid 98.3 5.1E-07 1.7E-11 85.1 5.7 41 1-41 2-44 (475)
248 2yg5_A Putrescine oxidase; oxi 98.3 5.3E-07 1.8E-11 84.4 5.4 40 3-42 5-44 (453)
249 1v0j_A UDP-galactopyranose mut 98.3 6.1E-07 2.1E-11 82.5 5.5 42 3-44 7-49 (399)
250 3l8k_A Dihydrolipoyl dehydroge 98.3 2.8E-06 9.7E-11 79.8 9.6 103 4-143 173-275 (466)
251 2cul_A Glucose-inhibited divis 98.3 2.2E-06 7.6E-11 72.5 8.1 176 170-377 4-232 (232)
252 2a87_A TRXR, TR, thioredoxin r 98.3 1.3E-06 4.3E-11 78.4 6.9 102 4-145 156-257 (335)
253 2e1m_A L-glutamate oxidase; L- 98.3 7.5E-07 2.6E-11 80.6 5.3 42 3-44 44-86 (376)
254 1s3e_A Amine oxidase [flavin-c 98.2 1.1E-06 3.6E-11 83.9 6.4 39 3-41 4-42 (520)
255 3hdq_A UDP-galactopyranose mut 98.2 9.2E-07 3.2E-11 80.7 5.7 42 3-44 29-70 (397)
256 3fbs_A Oxidoreductase; structu 98.2 1.5E-06 5E-11 76.3 6.8 106 170-317 3-115 (297)
257 4dsg_A UDP-galactopyranose mut 98.2 1.7E-06 5.9E-11 81.5 7.3 42 3-44 9-51 (484)
258 2x8g_A Thioredoxin glutathione 98.2 8.5E-06 2.9E-10 79.1 12.1 105 4-143 287-398 (598)
259 3h28_A Sulfide-quinone reducta 98.2 2.5E-06 8.6E-11 79.3 7.8 105 170-317 3-112 (430)
260 3r9u_A Thioredoxin reductase; 98.2 4.3E-06 1.5E-10 74.0 8.6 100 4-143 148-247 (315)
261 1sez_A Protoporphyrinogen oxid 98.2 1.3E-06 4.5E-11 82.9 5.5 41 3-43 13-53 (504)
262 2ivd_A PPO, PPOX, protoporphyr 98.2 1.5E-06 5.3E-11 81.9 5.8 39 3-41 16-54 (478)
263 1hyu_A AHPF, alkyl hydroperoxi 98.2 9.8E-06 3.3E-10 77.2 11.0 100 4-143 356-456 (521)
264 3h8l_A NADH oxidase; membrane 98.1 3.4E-06 1.2E-10 77.8 7.4 105 170-317 2-116 (409)
265 2jae_A L-amino acid oxidase; o 98.1 1.8E-06 6E-11 81.8 5.6 39 3-41 11-49 (489)
266 2vvm_A Monoamine oxidase N; FA 98.1 2E-06 6.8E-11 81.5 5.9 38 4-41 40-77 (495)
267 3k30_A Histamine dehydrogenase 98.1 4.6E-06 1.6E-10 82.2 8.6 101 4-142 524-626 (690)
268 1i8t_A UDP-galactopyranose mut 98.1 2.9E-06 9.8E-11 77.1 5.6 40 4-43 2-41 (367)
269 4a5l_A Thioredoxin reductase; 98.1 1.4E-05 4.7E-10 70.7 9.8 103 4-145 153-255 (314)
270 1c0p_A D-amino acid oxidase; a 98.0 3.3E-06 1.1E-10 76.6 5.0 34 3-36 6-39 (363)
271 3ihm_A Styrene monooxygenase A 98.0 2.5E-06 8.5E-11 79.3 4.0 33 4-36 23-55 (430)
272 1d5t_A Guanine nucleotide diss 98.0 5.8E-06 2E-10 76.8 6.3 42 3-44 6-47 (433)
273 3p1w_A Rabgdi protein; GDI RAB 98.0 4.6E-06 1.6E-10 77.7 5.4 42 2-43 19-60 (475)
274 1b37_A Protein (polyamine oxid 98.0 6.6E-06 2.3E-10 77.4 5.9 42 3-44 4-46 (472)
275 3g5s_A Methylenetetrahydrofola 97.9 9.6E-06 3.3E-10 72.7 5.8 36 4-39 2-37 (443)
276 2iid_A L-amino-acid oxidase; f 97.9 6.6E-06 2.3E-10 78.0 4.7 40 3-42 33-72 (498)
277 4fk1_A Putative thioredoxin re 97.9 1.5E-05 5.1E-10 70.3 6.7 33 170-202 7-39 (304)
278 2xve_A Flavin-containing monoo 97.9 2.7E-05 9.4E-10 72.9 8.1 85 4-146 198-282 (464)
279 3v76_A Flavoprotein; structura 97.9 2E-05 6.9E-10 72.6 6.6 130 169-315 27-188 (417)
280 3g3e_A D-amino-acid oxidase; F 97.8 8E-06 2.7E-10 73.6 3.3 33 4-36 1-39 (351)
281 2gag_A Heterotetrameric sarcos 97.8 4.6E-05 1.6E-09 77.8 9.0 98 4-143 285-386 (965)
282 4gcm_A TRXR, thioredoxin reduc 97.8 0.00015 5E-09 64.1 10.9 101 4-143 146-246 (312)
283 2bry_A NEDD9 interacting prote 97.8 5.2E-05 1.8E-09 71.6 8.2 126 168-317 91-233 (497)
284 2z3y_A Lysine-specific histone 97.8 2.1E-05 7.1E-10 77.1 5.4 40 3-42 107-146 (662)
285 4a9w_A Monooxygenase; baeyer-v 97.8 2.4E-05 8.4E-10 70.3 5.4 32 4-36 164-195 (357)
286 2xag_A Lysine-specific histone 97.8 2.3E-05 8E-10 78.3 5.7 40 3-42 278-317 (852)
287 2gv8_A Monooxygenase; FMO, FAD 97.8 6.3E-05 2.2E-09 70.1 8.4 83 4-144 213-296 (447)
288 3gwf_A Cyclohexanone monooxyge 97.7 9.5E-05 3.2E-09 70.5 9.5 34 4-37 179-212 (540)
289 1cjc_A Protein (adrenodoxin re 97.7 0.00015 5.1E-09 67.8 10.6 139 4-148 146-339 (460)
290 1o94_A Tmadh, trimethylamine d 97.7 6.5E-05 2.2E-09 74.5 8.3 102 4-142 529-648 (729)
291 2gjc_A Thiazole biosynthetic e 97.7 5.2E-05 1.8E-09 66.9 6.2 189 171-377 67-325 (326)
292 1ps9_A 2,4-dienoyl-COA reducta 97.7 7.6E-05 2.6E-09 73.3 7.8 127 4-142 495-630 (671)
293 2vdc_G Glutamate synthase [NAD 97.7 0.00011 3.6E-09 68.6 8.4 100 4-142 265-380 (456)
294 2gqf_A Hypothetical protein HI 97.7 8E-05 2.7E-09 68.3 7.2 33 170-202 5-37 (401)
295 1lqt_A FPRA; NADP+ derivative, 97.6 0.00022 7.6E-09 66.5 10.1 129 4-142 148-328 (456)
296 3nlc_A Uncharacterized protein 97.6 4.4E-05 1.5E-09 72.6 5.0 35 168-202 106-140 (549)
297 3alj_A 2-methyl-3-hydroxypyrid 97.6 0.00024 8.1E-09 64.6 9.6 139 169-317 11-163 (379)
298 2i0z_A NAD(FAD)-utilizing dehy 97.5 7.8E-05 2.7E-09 69.5 5.4 143 170-315 27-192 (447)
299 3k7m_X 6-hydroxy-L-nicotine ox 97.5 0.00024 8.2E-09 65.8 8.5 32 171-202 3-34 (431)
300 3jsk_A Cypbp37 protein; octame 97.5 3.8E-05 1.3E-09 68.2 2.7 33 170-202 80-114 (344)
301 1kdg_A CDH, cellobiose dehydro 97.5 9.8E-05 3.4E-09 70.7 5.1 34 3-36 7-40 (546)
302 4ap3_A Steroid monooxygenase; 97.4 0.00019 6.3E-09 68.7 6.7 34 169-202 21-54 (549)
303 3uox_A Otemo; baeyer-villiger 97.4 0.00012 4E-09 70.0 4.6 34 169-202 9-42 (545)
304 1gte_A Dihydropyrimidine dehyd 97.4 0.00079 2.7E-08 69.2 11.0 98 4-140 333-442 (1025)
305 3t37_A Probable dehydrogenase; 97.3 0.00013 4.5E-09 69.5 4.4 34 3-36 17-51 (526)
306 1n4w_A CHOD, cholesterol oxida 97.3 0.0002 7E-09 67.7 5.5 38 2-39 4-41 (504)
307 3fmw_A Oxygenase; mithramycin, 97.3 8.3E-05 2.8E-09 71.4 2.8 33 170-202 50-82 (570)
308 2x3n_A Probable FAD-dependent 97.3 0.00087 3E-08 61.3 9.4 141 170-316 7-168 (399)
309 3ayj_A Pro-enzyme of L-phenyla 97.3 7.8E-05 2.7E-09 72.7 2.4 35 4-38 57-100 (721)
310 2vou_A 2,6-dihydroxypyridine h 97.3 0.00076 2.6E-08 61.7 8.5 34 169-202 5-38 (397)
311 3q9t_A Choline dehydrogenase a 97.3 0.00019 6.6E-09 68.7 4.5 35 3-37 6-41 (577)
312 1ju2_A HydroxynitrIle lyase; f 97.2 0.00015 5E-09 69.2 3.5 35 3-38 26-60 (536)
313 2zxi_A TRNA uridine 5-carboxym 97.2 0.0003 1E-08 67.5 5.3 138 170-316 28-182 (637)
314 1vg0_A RAB proteins geranylger 97.2 0.00035 1.2E-08 67.2 5.8 42 3-44 8-49 (650)
315 3ces_A MNMG, tRNA uridine 5-ca 97.2 0.00072 2.5E-08 65.1 7.8 138 170-316 29-183 (651)
316 1gpe_A Protein (glucose oxidas 97.2 0.00029 9.9E-09 67.9 5.1 36 2-37 23-59 (587)
317 1coy_A Cholesterol oxidase; ox 97.1 0.00036 1.2E-08 66.0 5.0 35 3-37 11-45 (507)
318 3qvp_A Glucose oxidase; oxidor 97.1 0.00033 1.1E-08 67.1 4.6 34 3-36 19-53 (583)
319 1y0p_A Fumarate reductase flav 97.1 0.0022 7.4E-08 61.7 10.0 34 169-202 126-159 (571)
320 3nix_A Flavoprotein/dehydrogen 97.1 0.00015 5.2E-09 66.9 1.8 33 170-202 6-38 (421)
321 3i3l_A Alkylhalidase CMLS; fla 97.1 0.00043 1.5E-08 66.7 4.8 34 169-202 23-56 (591)
322 3cp8_A TRNA uridine 5-carboxym 97.0 0.0025 8.7E-08 61.3 9.8 34 169-202 21-54 (641)
323 3nrn_A Uncharacterized protein 97.0 0.0031 1E-07 58.1 10.2 33 170-202 1-33 (421)
324 4hb9_A Similarities with proba 97.0 0.0018 6.2E-08 59.2 8.4 32 171-202 3-34 (412)
325 1k0i_A P-hydroxybenzoate hydro 97.0 0.0023 7.9E-08 58.3 8.9 33 170-202 3-35 (394)
326 1y56_B Sarcosine oxidase; dehy 97.0 0.0014 4.7E-08 59.5 7.3 33 170-202 6-38 (382)
327 3fim_B ARYL-alcohol oxidase; A 96.9 0.00035 1.2E-08 66.8 3.0 36 3-38 2-38 (566)
328 3rp8_A Flavoprotein monooxygen 96.9 0.00044 1.5E-08 63.5 3.4 35 168-202 22-56 (407)
329 3dme_A Conserved exported prot 96.9 0.00097 3.3E-08 60.0 5.3 33 170-202 5-37 (369)
330 3e1t_A Halogenase; flavoprotei 96.9 0.001 3.5E-08 63.1 5.6 33 170-202 8-40 (512)
331 1qo8_A Flavocytochrome C3 fuma 96.9 0.0024 8.3E-08 61.3 8.2 33 170-202 122-154 (566)
332 1id1_A Putative potassium chan 96.9 0.0015 5.1E-08 50.9 5.6 36 1-36 1-36 (153)
333 1yvv_A Amine oxidase, flavin-c 96.9 0.0031 1.1E-07 56.0 8.4 33 170-202 3-35 (336)
334 2jbv_A Choline oxidase; alcoho 96.8 0.00076 2.6E-08 64.4 4.5 36 3-38 13-49 (546)
335 1ryi_A Glycine oxidase; flavop 96.8 0.0036 1.2E-07 56.7 8.4 34 169-202 17-50 (382)
336 2xdo_A TETX2 protein; tetracyc 96.8 0.0079 2.7E-07 54.9 10.7 35 168-202 25-59 (398)
337 4b63_A L-ornithine N5 monooxyg 96.7 0.0074 2.5E-07 56.9 10.4 33 4-36 247-281 (501)
338 1w4x_A Phenylacetone monooxyge 96.7 0.0021 7.2E-08 61.4 6.1 33 170-202 17-49 (542)
339 2qa2_A CABE, polyketide oxygen 96.7 0.00026 8.9E-09 66.9 -0.3 35 168-202 11-45 (499)
340 3qj4_A Renalase; FAD/NAD(P)-bi 96.6 0.0059 2E-07 54.4 8.6 33 170-202 2-37 (342)
341 1d4d_A Flavocytochrome C fumar 96.6 0.0062 2.1E-07 58.5 9.2 34 169-202 126-159 (572)
342 2gag_B Heterotetrameric sarcos 96.6 0.0036 1.2E-07 57.1 7.2 34 169-202 21-56 (405)
343 3cgv_A Geranylgeranyl reductas 96.6 0.0012 4.1E-08 60.2 3.4 33 170-202 5-37 (397)
344 2qa1_A PGAE, polyketide oxygen 96.5 0.00027 9.3E-09 66.8 -1.1 34 169-202 11-44 (500)
345 3ihg_A RDME; flavoenzyme, anth 96.5 0.002 6.8E-08 61.4 4.9 33 170-202 6-38 (535)
346 3ps9_A TRNA 5-methylaminomethy 96.5 0.0096 3.3E-07 58.4 9.7 34 169-202 272-305 (676)
347 3nyc_A D-arginine dehydrogenas 96.5 0.0014 4.9E-08 59.3 3.3 34 168-202 8-41 (381)
348 3atr_A Conserved archaeal prot 96.5 0.0045 1.5E-07 57.6 6.7 33 170-202 7-39 (453)
349 4at0_A 3-ketosteroid-delta4-5a 96.4 0.014 5E-07 55.1 10.1 33 170-202 42-74 (510)
350 3llv_A Exopolyphosphatase-rela 96.4 0.0047 1.6E-07 47.2 5.3 33 4-36 7-39 (141)
351 1y56_A Hypothetical protein PH 96.3 0.002 6.7E-08 60.8 3.6 33 169-202 108-140 (493)
352 2pyx_A Tryptophan halogenase; 96.3 0.0027 9.1E-08 60.4 4.4 34 169-202 7-52 (526)
353 2g1u_A Hypothetical protein TM 96.3 0.0042 1.4E-07 48.5 4.7 33 4-36 20-52 (155)
354 1lss_A TRK system potassium up 96.3 0.0041 1.4E-07 47.3 4.5 33 4-36 5-37 (140)
355 3fwz_A Inner membrane protein 96.3 0.0057 1.9E-07 46.7 5.3 33 4-36 8-40 (140)
356 3dfz_A SIRC, precorrin-2 dehyd 96.2 0.0082 2.8E-07 49.7 6.1 36 166-201 28-63 (223)
357 2hmt_A YUAA protein; RCK, KTN, 96.0 0.0089 3E-07 45.6 5.0 33 4-36 7-39 (144)
358 1chu_A Protein (L-aspartate ox 95.9 0.032 1.1E-06 53.0 9.5 32 170-202 9-40 (540)
359 2e5v_A L-aspartate oxidase; ar 95.9 0.02 6.8E-07 53.5 7.9 31 171-201 1-31 (472)
360 2wdq_A Succinate dehydrogenase 95.8 0.057 1.9E-06 51.9 11.1 33 170-202 8-40 (588)
361 3c85_A Putative glutathione-re 95.8 0.01 3.6E-07 47.5 5.1 33 4-36 40-73 (183)
362 3ic5_A Putative saccharopine d 95.8 0.0075 2.6E-07 44.2 3.9 33 4-36 6-39 (118)
363 3kkj_A Amine oxidase, flavin-c 95.8 0.0047 1.6E-07 52.7 3.0 32 171-202 4-35 (336)
364 3dfz_A SIRC, precorrin-2 dehyd 95.7 0.013 4.4E-07 48.5 5.2 34 3-36 31-64 (223)
365 1kf6_A Fumarate reductase flav 95.6 0.091 3.1E-06 50.6 11.4 33 170-202 6-40 (602)
366 3ghy_A Ketopantoate reductase 95.5 0.014 4.9E-07 51.8 5.2 35 1-35 1-35 (335)
367 4e12_A Diketoreductase; oxidor 95.5 0.013 4.5E-07 50.7 4.7 34 3-36 4-37 (283)
368 3ado_A Lambda-crystallin; L-gu 95.4 0.014 5E-07 51.1 4.8 33 4-36 7-39 (319)
369 2gmh_A Electron transfer flavo 95.3 0.034 1.2E-06 53.5 7.4 33 170-202 36-74 (584)
370 3l4b_C TRKA K+ channel protien 95.2 0.017 5.8E-07 47.8 4.5 32 5-36 2-33 (218)
371 2dkh_A 3-hydroxybenzoate hydro 95.2 0.011 3.7E-07 57.6 3.5 33 170-202 33-66 (639)
372 2dpo_A L-gulonate 3-dehydrogen 95.1 0.02 6.8E-07 50.4 4.8 33 4-36 7-39 (319)
373 1kyq_A Met8P, siroheme biosynt 95.1 0.013 4.4E-07 50.1 3.4 34 3-36 13-46 (274)
374 2x5o_A UDP-N-acetylmuramoylala 95.1 0.021 7E-07 52.9 5.0 37 3-39 5-41 (439)
375 3lk7_A UDP-N-acetylmuramoylala 95.1 0.043 1.5E-06 50.9 7.1 37 166-202 6-42 (451)
376 4ffl_A PYLC; amino acid, biosy 95.1 0.024 8.1E-07 51.0 5.3 37 3-39 1-37 (363)
377 3i83_A 2-dehydropantoate 2-red 95.0 0.021 7E-07 50.4 4.5 33 4-36 3-35 (320)
378 3eag_A UDP-N-acetylmuramate:L- 94.9 0.052 1.8E-06 48.0 6.8 35 168-202 3-38 (326)
379 3hn2_A 2-dehydropantoate 2-red 94.8 0.024 8.1E-07 49.8 4.5 33 4-36 3-35 (312)
380 3lk7_A UDP-N-acetylmuramoylala 94.8 0.024 8E-07 52.7 4.5 33 4-36 10-42 (451)
381 1bg6_A N-(1-D-carboxylethyl)-L 94.8 0.024 8.1E-07 50.8 4.4 36 1-36 2-37 (359)
382 3gpi_A NAD-dependent epimerase 94.6 0.042 1.4E-06 47.4 5.5 36 1-36 1-36 (286)
383 3gg2_A Sugar dehydrogenase, UD 94.6 0.027 9.2E-07 52.2 4.4 35 1-36 1-35 (450)
384 3gvi_A Malate dehydrogenase; N 94.5 0.033 1.1E-06 49.0 4.6 36 1-36 5-41 (324)
385 3g17_A Similar to 2-dehydropan 94.5 0.032 1.1E-06 48.5 4.5 33 4-36 3-35 (294)
386 3oz2_A Digeranylgeranylglycero 94.5 0.019 6.6E-07 51.9 3.2 32 171-202 6-37 (397)
387 2zyd_A 6-phosphogluconate dehy 94.5 0.036 1.2E-06 51.7 5.0 36 1-36 13-48 (480)
388 3tl2_A Malate dehydrogenase; c 94.5 0.033 1.1E-06 48.8 4.5 34 2-35 7-41 (315)
389 1f0y_A HCDH, L-3-hydroxyacyl-C 94.5 0.032 1.1E-06 48.7 4.4 33 4-36 16-48 (302)
390 3hwr_A 2-dehydropantoate 2-red 94.5 0.038 1.3E-06 48.6 4.9 40 162-202 12-51 (318)
391 2ewd_A Lactate dehydrogenase,; 94.4 0.032 1.1E-06 49.1 4.3 36 1-36 1-38 (317)
392 3k96_A Glycerol-3-phosphate de 94.4 0.044 1.5E-06 49.0 5.2 34 3-36 29-62 (356)
393 2a9f_A Putative malic enzyme ( 94.4 0.035 1.2E-06 49.6 4.4 35 2-36 187-222 (398)
394 1vl6_A Malate oxidoreductase; 94.4 0.035 1.2E-06 49.6 4.4 34 2-35 191-225 (388)
395 3p7m_A Malate dehydrogenase; p 94.3 0.041 1.4E-06 48.4 4.8 36 1-36 3-39 (321)
396 3ihm_A Styrene monooxygenase A 94.3 0.023 7.7E-07 52.5 3.3 34 169-202 22-55 (430)
397 2g1u_A Hypothetical protein TM 94.3 0.038 1.3E-06 42.8 4.0 37 166-202 16-52 (155)
398 4dio_A NAD(P) transhydrogenase 94.2 0.039 1.3E-06 49.8 4.4 33 4-36 191-223 (405)
399 2ew2_A 2-dehydropantoate 2-red 94.2 0.039 1.3E-06 48.3 4.3 33 4-36 4-36 (316)
400 3tri_A Pyrroline-5-carboxylate 94.1 0.053 1.8E-06 46.7 5.0 36 1-36 1-39 (280)
401 3oj0_A Glutr, glutamyl-tRNA re 94.1 0.021 7.1E-07 43.7 2.2 33 4-36 22-54 (144)
402 1t2d_A LDH-P, L-lactate dehydr 94.1 0.046 1.6E-06 48.1 4.6 36 1-36 1-38 (322)
403 1zej_A HBD-9, 3-hydroxyacyl-CO 94.1 0.042 1.4E-06 47.6 4.2 33 3-36 12-44 (293)
404 3mog_A Probable 3-hydroxybutyr 94.1 0.054 1.8E-06 50.5 5.2 34 3-36 5-38 (483)
405 1hdo_A Biliverdin IX beta redu 94.0 0.058 2E-06 43.7 4.9 36 1-36 1-37 (206)
406 3i83_A 2-dehydropantoate 2-red 94.0 0.058 2E-06 47.5 5.1 33 170-202 3-35 (320)
407 2hjr_A Malate dehydrogenase; m 93.9 0.053 1.8E-06 47.9 4.7 33 4-36 15-48 (328)
408 3g79_A NDP-N-acetyl-D-galactos 93.9 0.046 1.6E-06 50.8 4.3 34 4-37 19-54 (478)
409 2oln_A NIKD protein; flavoprot 93.9 0.036 1.2E-06 50.4 3.6 33 170-202 5-37 (397)
410 3g5s_A Methylenetetrahydrofola 93.9 0.034 1.2E-06 50.0 3.3 33 170-202 2-34 (443)
411 3qha_A Putative oxidoreductase 93.9 0.05 1.7E-06 47.3 4.3 35 3-37 15-49 (296)
412 2raf_A Putative dinucleotide-b 93.8 0.057 1.9E-06 44.3 4.4 34 4-37 20-53 (209)
413 1ks9_A KPA reductase;, 2-dehyd 93.8 0.052 1.8E-06 46.9 4.5 32 5-36 2-33 (291)
414 3dtt_A NADP oxidoreductase; st 93.8 0.058 2E-06 45.4 4.6 34 3-36 19-52 (245)
415 1jw9_B Molybdopterin biosynthe 93.8 0.045 1.5E-06 46.3 3.8 33 4-36 32-65 (249)
416 3hn2_A 2-dehydropantoate 2-red 93.8 0.068 2.3E-06 46.9 5.2 33 170-202 3-35 (312)
417 2y0c_A BCEC, UDP-glucose dehyd 93.8 0.049 1.7E-06 50.8 4.4 33 4-36 9-41 (478)
418 2rcy_A Pyrroline carboxylate r 93.8 0.055 1.9E-06 46.0 4.4 37 1-37 2-42 (262)
419 4e21_A 6-phosphogluconate dehy 93.7 0.054 1.9E-06 48.4 4.4 35 2-36 21-55 (358)
420 3p2y_A Alanine dehydrogenase/p 93.7 0.05 1.7E-06 48.7 4.1 33 4-36 185-217 (381)
421 1nyt_A Shikimate 5-dehydrogena 93.6 0.067 2.3E-06 45.8 4.7 34 3-36 119-152 (271)
422 4huj_A Uncharacterized protein 93.6 0.038 1.3E-06 45.8 3.0 33 4-36 24-57 (220)
423 1zcj_A Peroxisomal bifunctiona 93.6 0.058 2E-06 50.2 4.5 33 4-36 38-70 (463)
424 3pdu_A 3-hydroxyisobutyrate de 93.6 0.053 1.8E-06 46.9 4.0 33 4-36 2-34 (287)
425 1c0p_A D-amino acid oxidase; a 93.5 0.048 1.6E-06 48.8 3.8 34 169-202 6-39 (363)
426 3fi9_A Malate dehydrogenase; s 93.5 0.081 2.8E-06 46.9 5.1 36 1-36 6-44 (343)
427 3ka7_A Oxidoreductase; structu 93.5 0.039 1.3E-06 50.6 3.3 33 170-202 1-33 (425)
428 1pzg_A LDH, lactate dehydrogen 93.5 0.062 2.1E-06 47.5 4.3 33 4-36 10-43 (331)
429 2gf3_A MSOX, monomeric sarcosi 93.5 0.041 1.4E-06 49.7 3.2 33 170-202 4-36 (389)
430 2uzz_A N-methyl-L-tryptophan o 93.5 0.031 1.1E-06 50.2 2.4 33 170-202 3-35 (372)
431 1z82_A Glycerol-3-phosphate de 93.4 0.065 2.2E-06 47.5 4.4 34 3-36 14-47 (335)
432 1lld_A L-lactate dehydrogenase 93.4 0.063 2.2E-06 47.2 4.3 33 4-36 8-42 (319)
433 3k6j_A Protein F01G10.3, confi 93.4 0.07 2.4E-06 49.2 4.7 33 4-36 55-87 (460)
434 3ego_A Probable 2-dehydropanto 93.4 0.063 2.2E-06 47.0 4.2 34 2-36 1-34 (307)
435 2vns_A Metalloreductase steap3 93.4 0.099 3.4E-06 43.0 5.2 33 4-36 29-61 (215)
436 2iz1_A 6-phosphogluconate dehy 93.4 0.091 3.1E-06 49.0 5.4 36 1-36 3-38 (474)
437 1ur5_A Malate dehydrogenase; o 93.3 0.074 2.5E-06 46.6 4.5 33 4-36 3-36 (309)
438 1y6j_A L-lactate dehydrogenase 93.3 0.075 2.6E-06 46.7 4.6 34 3-36 7-42 (318)
439 2v6b_A L-LDH, L-lactate dehydr 93.3 0.069 2.4E-06 46.6 4.3 32 5-36 2-35 (304)
440 3phh_A Shikimate dehydrogenase 93.3 0.078 2.7E-06 45.2 4.5 33 4-36 119-151 (269)
441 1x0v_A GPD-C, GPDH-C, glycerol 93.3 0.042 1.4E-06 49.1 2.9 37 1-37 6-49 (354)
442 3l9w_A Glutathione-regulated p 93.3 0.096 3.3E-06 47.8 5.3 33 4-36 5-37 (413)
443 3doj_A AT3G25530, dehydrogenas 93.2 0.07 2.4E-06 46.7 4.2 33 4-36 22-54 (310)
444 3d0o_A L-LDH 1, L-lactate dehy 93.1 0.072 2.5E-06 46.8 4.2 35 2-36 5-41 (317)
445 4gwg_A 6-phosphogluconate dehy 93.1 0.11 3.6E-06 48.5 5.4 36 1-36 2-37 (484)
446 2iid_A L-amino-acid oxidase; f 93.1 0.046 1.6E-06 51.3 3.1 35 168-202 32-66 (498)
447 4a7p_A UDP-glucose dehydrogena 93.1 0.074 2.5E-06 49.0 4.3 34 4-37 9-42 (446)
448 3c4a_A Probable tryptophan hyd 93.1 0.049 1.7E-06 49.2 3.1 33 170-202 1-35 (381)
449 1pjc_A Protein (L-alanine dehy 93.0 0.083 2.8E-06 47.4 4.5 33 4-36 168-200 (361)
450 2uyy_A N-PAC protein; long-cha 93.0 0.12 4E-06 45.4 5.4 33 4-36 31-63 (316)
451 4g65_A TRK system potassium up 93.0 0.047 1.6E-06 50.7 2.9 33 4-36 4-36 (461)
452 3nks_A Protoporphyrinogen oxid 93.0 0.053 1.8E-06 50.5 3.3 33 170-202 3-37 (477)
453 3g0o_A 3-hydroxyisobutyrate de 93.0 0.085 2.9E-06 46.0 4.4 33 4-36 8-40 (303)
454 2izz_A Pyrroline-5-carboxylate 93.0 0.09 3.1E-06 46.3 4.6 35 2-36 21-59 (322)
455 1pjq_A CYSG, siroheme synthase 92.9 0.096 3.3E-06 48.6 4.8 34 3-36 12-45 (457)
456 3vtf_A UDP-glucose 6-dehydroge 92.9 0.074 2.5E-06 48.7 4.0 33 4-36 22-54 (444)
457 3eag_A UDP-N-acetylmuramate:L- 92.9 0.093 3.2E-06 46.3 4.5 33 4-36 5-38 (326)
458 3c96_A Flavin-containing monoo 92.9 0.063 2.1E-06 49.0 3.5 34 169-202 4-38 (410)
459 2egg_A AROE, shikimate 5-dehyd 92.9 0.096 3.3E-06 45.5 4.5 34 3-36 141-175 (297)
460 1x13_A NAD(P) transhydrogenase 92.9 0.084 2.9E-06 48.0 4.3 33 4-36 173-205 (401)
461 3rui_A Ubiquitin-like modifier 92.8 0.095 3.3E-06 46.1 4.4 34 3-36 34-68 (340)
462 2h78_A Hibadh, 3-hydroxyisobut 92.8 0.08 2.7E-06 46.1 3.9 33 4-36 4-36 (302)
463 1l7d_A Nicotinamide nucleotide 92.7 0.093 3.2E-06 47.5 4.4 33 4-36 173-205 (384)
464 3dje_A Fructosyl amine: oxygen 92.7 0.066 2.3E-06 49.3 3.5 34 169-202 6-40 (438)
465 1kyq_A Met8P, siroheme biosynt 92.7 0.083 2.8E-06 45.1 3.8 37 166-202 10-46 (274)
466 3pqe_A L-LDH, L-lactate dehydr 92.7 0.088 3E-06 46.3 4.0 33 4-36 6-40 (326)
467 3pef_A 6-phosphogluconate dehy 92.7 0.09 3.1E-06 45.4 4.1 33 4-36 2-34 (287)
468 3l6d_A Putative oxidoreductase 92.7 0.14 4.9E-06 44.6 5.4 33 4-36 10-42 (306)
469 3h8v_A Ubiquitin-like modifier 92.6 0.086 2.9E-06 45.5 3.8 34 3-36 36-70 (292)
470 2q3e_A UDP-glucose 6-dehydroge 92.6 0.073 2.5E-06 49.6 3.6 36 1-36 2-40 (467)
471 3e8x_A Putative NAD-dependent 92.6 0.12 4E-06 43.1 4.6 34 3-36 21-55 (236)
472 1id1_A Putative potassium chan 92.6 0.1 3.6E-06 40.2 3.9 34 169-202 3-36 (153)
473 2e1m_A L-glutamate oxidase; L- 92.6 0.076 2.6E-06 47.8 3.5 34 168-201 43-76 (376)
474 3g3e_A D-amino-acid oxidase; F 92.6 0.058 2E-06 48.0 2.8 32 171-202 2-39 (351)
475 3don_A Shikimate dehydrogenase 92.5 0.12 4.1E-06 44.3 4.6 33 4-36 118-151 (277)
476 4gde_A UDP-galactopyranose mut 92.5 0.064 2.2E-06 50.5 3.2 43 269-311 227-273 (513)
477 1hyh_A L-hicdh, L-2-hydroxyiso 92.5 0.091 3.1E-06 46.0 4.0 33 4-36 2-36 (309)
478 1mv8_A GMD, GDP-mannose 6-dehy 92.5 0.081 2.8E-06 48.8 3.7 32 5-36 2-33 (436)
479 2b9w_A Putative aminooxidase; 92.5 0.073 2.5E-06 48.8 3.4 35 168-202 5-40 (424)
480 1p77_A Shikimate 5-dehydrogena 92.5 0.093 3.2E-06 45.0 3.8 34 3-36 119-152 (272)
481 3ius_A Uncharacterized conserv 92.4 0.12 4E-06 44.5 4.5 33 4-36 6-38 (286)
482 2eez_A Alanine dehydrogenase; 92.4 0.12 4E-06 46.5 4.6 33 4-36 167-199 (369)
483 3pid_A UDP-glucose 6-dehydroge 92.4 0.1 3.6E-06 47.7 4.2 32 4-36 37-68 (432)
484 1evy_A Glycerol-3-phosphate de 92.3 0.075 2.6E-06 47.8 3.2 32 5-36 17-48 (366)
485 3ggo_A Prephenate dehydrogenas 92.3 0.13 4.5E-06 45.1 4.7 33 4-36 34-68 (314)
486 2p4q_A 6-phosphogluconate dehy 92.3 0.15 5.2E-06 47.7 5.4 34 3-36 10-43 (497)
487 2jae_A L-amino acid oxidase; o 92.3 0.089 3E-06 49.3 3.8 35 168-202 10-44 (489)
488 4ezb_A Uncharacterized conserv 92.3 0.11 3.7E-06 45.7 4.1 33 4-36 25-58 (317)
489 4dll_A 2-hydroxy-3-oxopropiona 92.3 0.11 3.8E-06 45.7 4.1 33 4-36 32-64 (320)
490 1guz_A Malate dehydrogenase; o 92.2 0.12 4.2E-06 45.2 4.4 32 5-36 2-35 (310)
491 2vhw_A Alanine dehydrogenase; 92.2 0.13 4.3E-06 46.4 4.6 34 3-36 168-201 (377)
492 4dgk_A Phytoene dehydrogenase; 92.2 0.22 7.5E-06 46.7 6.4 56 77-139 221-277 (501)
493 1jay_A Coenzyme F420H2:NADP+ o 92.2 0.13 4.6E-06 42.0 4.4 32 5-36 2-34 (212)
494 3jyo_A Quinate/shikimate dehyd 92.1 0.15 5E-06 43.9 4.7 34 3-36 127-161 (283)
495 3tnl_A Shikimate dehydrogenase 92.1 0.16 5.4E-06 44.4 4.9 34 3-36 154-188 (315)
496 1zud_1 Adenylyltransferase THI 92.1 0.11 3.8E-06 43.8 3.8 34 3-36 28-62 (251)
497 2qcu_A Aerobic glycerol-3-phos 92.1 0.073 2.5E-06 50.1 3.0 33 170-202 4-36 (501)
498 3i6i_A Putative leucoanthocyan 92.1 0.17 6E-06 44.8 5.3 36 1-36 8-44 (346)
499 2g5c_A Prephenate dehydrogenas 92.1 0.14 4.7E-06 44.1 4.5 33 4-36 2-36 (281)
500 2cvz_A Dehydrogenase, 3-hydrox 92.1 0.13 4.4E-06 44.4 4.3 32 4-36 2-33 (289)
No 1
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=1.4e-42 Score=317.98 Aligned_cols=341 Identities=20% Similarity=0.335 Sum_probs=260.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
|+++||+|||||++|+++|..|+++|.+|+|||+++.+||.|.. .++.+....+...+.++.++.+.....++++.++.
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVL 79 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHH
Confidence 77799999999999999999999999999999999999999975 36666666666666777776666656678889999
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEE-EEEeecCCCceEEEEeCEEEEccCC--CCCCCCCCCCCCCCcceee
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWI-IVAKNTALDAYEEYVARYLVVATGE--NGLIPEVPGLGSFEGEYMH 157 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vIlAtG~--~~~~~~~~g~~~~~~~~~~ 157 (381)
+++.+++++++++++++++|++++.++ +.|. |.+.++ .+.||+||+|||. .|..|.++|.+.+.+..++
T Consensus 80 ~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~g------~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~ 151 (357)
T 4a9w_A 80 AYLAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDGR------QWLARAVISATGTWGEAYTPEYQGLESFAGIQLH 151 (357)
T ss_dssp HHHHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTSC------EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEE
T ss_pred HHHHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCCC------EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEE
Confidence 999999999999999999999999876 6777 765542 7999999999996 4778899998888888889
Q ss_pred cCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhH--HHHHHHHhhCcHHHHHHHHHHHhh
Q 035902 158 SSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIV--FAGMLLLKFLPCKLVDFIVVMLSK 235 (381)
Q Consensus 158 ~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~--~~~~~~~~~l~~~~~~~~~~~~~~ 235 (381)
+..+.....+.+++++|||+|.+|+|+|..|++.+ +|+++.|++.+++|.... .+...+.+.+. .
T Consensus 152 ~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------- 218 (357)
T 4a9w_A 152 SAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGRVLFERATERWK----A-------- 218 (357)
T ss_dssp GGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTHHHHTC-------------------
T ss_pred eccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCccHHHHHHHHHh----c--------
Confidence 88888777778999999999999999999999998 699999986566665422 11111111110 0
Q ss_pred hhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccCcceEeCCeEEEcCCcEeeccEEEEecCCCCC
Q 035902 236 MKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPSITSINRNEVEFENGKIEEFEAIIFATGYKST 315 (381)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~ 315 (381)
.....+.... ......+.....+.+.++.+.+.....+++++.+++.+.+|+++++|.||+|+|++|+
T Consensus 219 -----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~ 286 (357)
T 4a9w_A 219 -----QQEGREPDLP-------PGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTGMQWADGTERAFDAVIWCTGFRPA 286 (357)
T ss_dssp ---------------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTEEECTTSCEEECSEEEECCCBCCC
T ss_pred -----cccccCCCcc-------cccccCcccChhHHHHHhcCceEEecCcceEeCCeeEECCCCEecCCEEEECCCcCCC
Confidence 0000000000 0000122334445556666666555558899999999999999999999999999999
Q ss_pred cchhccccCCcccccCCCCCCCCCC--CCCCCCcEEEEe--ccccc----ccCccHHHHHHHHHhhhccccC
Q 035902 316 VRNWLKRADKDFFDEYGMPKRNCPN--HWKGENGLYCAG--FSRTG----LHGISIDAKNIANDINLALTDH 379 (381)
Q Consensus 316 ~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~ifa~G--d~~~~----~~~a~~~a~~~a~~i~~~l~~~ 379 (381)
++ ++. . .++.+++|++.+| +. ..++.||||++| |+.+. ...|..||+.+|++|...|+++
T Consensus 287 ~~-~l~-~-~gl~~~~G~i~vd-~~~l~~t~~~~vya~Gd~d~~~~~~~~~~~A~~~g~~~a~~i~~~l~g~ 354 (357)
T 4a9w_A 287 LS-HLK-G-LDLVTPQGQVEVD-GSGLRALAVPSVWLLGYGDWNGMASATLIGVTRYAREAVRQVTAYCADH 354 (357)
T ss_dssp CG-GGT-T-TTCBCTTSCBCBC-TTSCBBSSCTTEEECSSCGGGSTTCSSTTTHHHHHHHHHHHHHHHTC--
T ss_pred Cc-ccC-c-ccccCCCCCcccc-CCcccCCCCCCeEEeccccccccchhhhhhhHHHHHHHHHHHHHHHHhh
Confidence 86 444 3 6666889999999 34 678999999999 66652 2289999999999999998763
No 2
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=1.2e-41 Score=321.06 Aligned_cols=306 Identities=21% Similarity=0.356 Sum_probs=239.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHh---CCCC---eEEEecCCCCCCCcCCCC---------------CCCeeeecCCccc
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNN---LSVP---NIILEREDCSASLWKKRA---------------YDRMKLHLAKQFC 59 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~---~g~~---v~lie~~~~~g~~~~~~~---------------~~~~~~~~~~~~~ 59 (381)
|. +||+|||||++|+++|..|++ .|.+ |+|||+++.+||.|.... |..+....+...+
T Consensus 1 M~-~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~ 79 (464)
T 2xve_A 1 MA-TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECL 79 (464)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGT
T ss_pred CC-CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhc
Confidence 63 799999999999999999999 9999 999999999999987532 3333333444444
Q ss_pred ccCCCCCCC----CCCCCCCHHHHHHHHHHHHHHhCCc--cccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEE
Q 035902 60 ELPHMPFPS----RTPTFVPRISFINYVDNYVSQMGIN--PRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLV 133 (381)
Q Consensus 60 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vI 133 (381)
.++.++++. +.+.++++.++.+|++++++++++. ++++++|++++..+..+.|.|++.++..++...+.||+||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d~VV 159 (464)
T 2xve_A 80 EFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFDYVV 159 (464)
T ss_dssp CBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEE
T ss_pred ccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcCEEE
Confidence 444444322 1245778899999999999999987 7899999999987644589999887433444679999999
Q ss_pred EccC--CCCCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhH
Q 035902 134 VATG--ENGLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIV 211 (381)
Q Consensus 134 lAtG--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~ 211 (381)
+||| +.|..|.+||.+.+.+.++|+..+.+...+.+++++|||+|.+|+|+|..|++.|++|+++.|++ .+++..
T Consensus 160 vAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~-~~~~~~-- 236 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT-APMGYK-- 236 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS-CCCCCC--
T ss_pred ECCCCCCCCccCCCCCcccCCceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC-CCCCCC--
Confidence 9999 67999999999888888899988877766789999999999999999999999999999999887 221110
Q ss_pred HHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccCcceEeCC
Q 035902 212 FAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPSITSINRN 291 (381)
Q Consensus 212 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~v~~~ 291 (381)
...+|+++..|++++++
T Consensus 237 ---------------------------------------------------------------~~~~V~~~~~V~~i~~~ 253 (464)
T 2xve_A 237 ---------------------------------------------------------------WPENWDERPNLVRVDTE 253 (464)
T ss_dssp ---------------------------------------------------------------CCTTEEECSCEEEECSS
T ss_pred ---------------------------------------------------------------CCCceEEcCCeEEEeCC
Confidence 01467777558888888
Q ss_pred eEEEcCCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCC--CCCCCCCCcEEEEeccccccc--CccHHHH
Q 035902 292 EVEFENGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNC--PNHWKGENGLYCAGFSRTGLH--GISIDAK 366 (381)
Q Consensus 292 ~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~--~~~~~~~~~ifa~Gd~~~~~~--~a~~~a~ 366 (381)
+|.+.||+++++|.||+|||++|++++ +. +..++ ++..|++ ++. ....++.|+||++||+..... .|..||+
T Consensus 254 ~V~~~dG~~i~~D~Vi~atG~~p~~~~-l~-~~~gl~~~~~~~v-~~~~~~~~~t~~p~i~aiGd~~~~~~~~~a~~qa~ 330 (464)
T 2xve_A 254 NAYFADGSSEKVDAIILCTGYIHHFPF-LN-DDLRLVTNNRLWP-LNLYKGVVWEDNPKFFYIGMQDQWYSFNMFDAQAW 330 (464)
T ss_dssp EEEETTSCEEECSEEEECCCBCCCCTT-BC-TTTCCCCCSSSCC-SSEETTTEESSSTTEEECSCSCCSSCHHHHHHHHH
T ss_pred EEEECCCCEEeCCEEEECCCCCCCCCC-cC-cccccccCCCccc-ccccceEecCCCCCEEEEeCcccccchHHHHHHHH
Confidence 999999999999999999999999864 44 32455 4444455 231 123478999999999886543 8889999
Q ss_pred HHHHHhhhcc
Q 035902 367 NIANDINLAL 376 (381)
Q Consensus 367 ~~a~~i~~~l 376 (381)
.+|++|.+.+
T Consensus 331 ~~a~~l~G~~ 340 (464)
T 2xve_A 331 YARDVIMGRL 340 (464)
T ss_dssp HHHHHHTTSS
T ss_pred HHHHHHcCCC
Confidence 9999998754
No 3
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=8.1e-41 Score=319.82 Aligned_cols=363 Identities=18% Similarity=0.315 Sum_probs=269.7
Q ss_pred cccEEEECCCHHHHHHHHHHH-hCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCC----CCCCCCCCCCHH
Q 035902 3 EVPVVIVGAGPAGLATSACLN-NLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMP----FPSRTPTFVPRI 77 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~-~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 77 (381)
++||+|||||++|+++|..|+ +.|.+|+|||+++.+||.|....|+.+..+.+...+.+...+ ...+...++.+.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999999 889999999999999999998889998888777666554221 112223466788
Q ss_pred HHHHHHHHHHHHhCC--ccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccC--CCCCCCCCCCCCCCCc
Q 035902 78 SFINYVDNYVSQMGI--NPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATG--ENGLIPEVPGLGSFEG 153 (381)
Q Consensus 78 ~~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG--~~~~~~~~~g~~~~~~ 153 (381)
++.+|+...++++++ .++++++|++++.+++.+.|.|++.++ +.++||+||+||| +.|..|++||++.+.+
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G-----~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g 162 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG-----EVYRAKYVVNAVGLLSAINFPNLPGLDTFEG 162 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS-----CEEEEEEEEECCCSCCSBCCCCCTTGGGCCS
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC-----CEEEeCEEEECCcccccCCCCCCCCccccCC
Confidence 999999999999998 788999999999987657899998876 5799999999999 4699999999998989
Q ss_pred ceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHH----HHH--
Q 035902 154 EYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCK----LVD-- 227 (381)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~----~~~-- 227 (381)
..+|+..+.......+++++|||+|.+|+|+|..|++.+.+|+++.|++.+++|..+.++.....+.+... +..
T Consensus 163 ~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~ 242 (540)
T 3gwf_A 163 ETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAK 242 (540)
T ss_dssp EEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHH
T ss_pred CEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHH
Confidence 99999988877777899999999999999999999999999999999997788876664444333322211 000
Q ss_pred -------------------------HHHHHHh---------------------------------hhhhcCccccCCCCC
Q 035902 228 -------------------------FIVVMLS---------------------------------KMKFGNLFKYGLERP 249 (381)
Q Consensus 228 -------------------------~~~~~~~---------------------------------~~~~~~~~~~~~~~~ 249 (381)
.+...|. +....+.+.....
T Consensus 243 ~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l-- 320 (540)
T 3gwf_A 243 NSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKL-- 320 (540)
T ss_dssp TSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHH--
T ss_pred hccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhC--
Confidence 0000000 0000111111111
Q ss_pred CCCCcccccccCCCccccchhhhhhcCCCeEEc---cC-cceEeCCeEEEcCCcEeeccEEEEecCCCCCcchhccc---
Q 035902 250 KKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVF---PS-ITSINRNEVEFENGKIEEFEAIIFATGYKSTVRNWLKR--- 322 (381)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~--- 322 (381)
.|. ...++++.++.++++.+++.+|+++ .. |+++++++|.+.||+++++|+||+|||++++...+...
T Consensus 321 --~P~---~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~gv~~~dG~~~~~DvIV~ATGf~~~~~~~~~~~i~ 395 (540)
T 3gwf_A 321 --MPK---GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKGVVTEDGVLHELDVLVFATGFDAVDGNYRRIEIR 395 (540)
T ss_dssp --CCC---SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSEEEETTCCEEECSEEEECCCBSCSSHHHHTSEEE
T ss_pred --CCC---CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCeEEcCCCCEEECCEEEECCccCccccCcCcceEE
Confidence 111 3456788889999999999999999 56 99999999999999999999999999999987322110
Q ss_pred cCCcc-ccc--CCCCCCCCCCCCCCCCcEEEE-eccccc---ccCccHHHHHHHHHhhhccc
Q 035902 323 ADKDF-FDE--YGMPKRNCPNHWKGENGLYCA-GFSRTG---LHGISIDAKNIANDINLALT 377 (381)
Q Consensus 323 ~~~~~-~~~--~g~~~~~~~~~~~~~~~ifa~-Gd~~~~---~~~a~~~a~~~a~~i~~~l~ 377 (381)
...|. +++ .+.+.+.......+.||+|++ |+.... +..+..|+..+++.|....+
T Consensus 396 g~~G~~l~~~w~~~~~~y~g~~v~gfPN~f~~~Gp~~~~~s~~~~~e~q~~~i~~~i~~~~~ 457 (540)
T 3gwf_A 396 GRDGLHINDHWDGQPTSYLGVSTANFPNWFMVLGPNGPFTNLPPSIETQVEWISDTIGYAER 457 (540)
T ss_dssp CGGGCBHHHHTSSSCCCBTTTBCTTCTTEEESSCSSCBCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcCHHHhhccChhhccccccCCCCceEEEecCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 11222 221 122333322233578999999 876442 22778888888888865443
No 4
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=8.6e-40 Score=313.31 Aligned_cols=363 Identities=18% Similarity=0.253 Sum_probs=264.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCC----CCCCCCCCCCHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMP----FPSRTPTFVPRIS 78 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 78 (381)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|..+.|+.+.++.+...+.+...+ ...+...++++.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 479999999999999999999999999999999999999998889998888887766654321 1123345778899
Q ss_pred HHHHHHHHHHHhCC--ccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccC--CCCCCCCCCCCCCCCcc
Q 035902 79 FINYVDNYVSQMGI--NPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATG--ENGLIPEVPGLGSFEGE 154 (381)
Q Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG--~~~~~~~~~g~~~~~~~ 154 (381)
+.+|+++.++++++ .++++++|++++.++..+.|.|++.++ ++++||+||+||| +.|..|.+||++.+.+.
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G-----~~i~ad~lV~AtG~~s~p~~p~ipG~~~f~g~ 175 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG-----DEVSARFLVVAAGPLSNANTPAFDGLDRFTGD 175 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC-----CEEEEEEEEECCCSEEECCCCCCTTGGGCCSE
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC-----CEEEeCEEEECcCCCCCCCCCCCCCcccCCCc
Confidence 99999999999998 688999999999987667899998876 5799999999999 66999999999989898
Q ss_pred eeecCCCC-CCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHH----HHH--
Q 035902 155 YMHSSKYE-NGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCK----LVD-- 227 (381)
Q Consensus 155 ~~~~~~~~-~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~----~~~-- 227 (381)
.+|+..+. +..++.+++++|||+|.+|+|+|..|++.+.+|++++|++.+++|..+.++.....+.+... ...
T Consensus 176 ~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~~~~~~~~r 255 (549)
T 4ap3_A 176 IVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQKANYAERRRLSR 255 (549)
T ss_dssp EEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHHHTHHHHHHHHH
T ss_pred eEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHHhccHHHHHHHH
Confidence 99998887 56677899999999999999999999999999999999998788887775555444433211 100
Q ss_pred ------------------------HHH-HHHh------------------------hhh-------hcCccccCCCCCCC
Q 035902 228 ------------------------FIV-VMLS------------------------KMK-------FGNLFKYGLERPKK 251 (381)
Q Consensus 228 ------------------------~~~-~~~~------------------------~~~-------~~~~~~~~~~~~~~ 251 (381)
.++ ..|. +.+ ..+.+......|.
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~- 334 (549)
T 4ap3_A 256 ESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAELLTPK- 334 (549)
T ss_dssp HSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCS-
T ss_pred hhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCC-
Confidence 000 0000 000 0011100001111
Q ss_pred CCcccccccCCCccccchhhhhhcCCCeEEc---cC-cceEeCCeEEEcCCcEeeccEEEEecCCCCCcchhccc---cC
Q 035902 252 GPFYFKAITGQTPTIDVGAMDKIRKGEIQVF---PS-ITSINRNEVEFENGKIEEFEAIIFATGYKSTVRNWLKR---AD 324 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~---~~ 324 (381)
.-....+++.++.++.+.+++.+|+++ .. |+++++++|.+.+| ++++|+||+|||++++...+... ..
T Consensus 335 ----~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~gv~~~dG-~~~~D~iI~ATGf~~~~~~~~~~~i~g~ 409 (549)
T 4ap3_A 335 ----DHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETGIVTTGA-HYDLDMIVLATGFDAMTGSLDKLEIVGR 409 (549)
T ss_dssp ----SCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCEEESSTTGGGSEEECG
T ss_pred ----CCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCcEEeCCC-ceecCEEEECCcccccccccCceeEECC
Confidence 012345677888899999999999999 66 99999999999999 99999999999999886322110 11
Q ss_pred Ccc-cc--cCCCCCCCCCCCCCCCCcEEEE-eccccc-----ccCccHHHHHHHHHhhhcc
Q 035902 325 KDF-FD--EYGMPKRNCPNHWKGENGLYCA-GFSRTG-----LHGISIDAKNIANDINLAL 376 (381)
Q Consensus 325 ~~~-~~--~~g~~~~~~~~~~~~~~~ifa~-Gd~~~~-----~~~a~~~a~~~a~~i~~~l 376 (381)
.|. ++ ..+.+.+.......+.||+|.+ |.-... +..+..|+..+++.|....
T Consensus 410 ~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~Gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~ 470 (549)
T 4ap3_A 410 GGRTLKETWAAGPRTYLGLGIDGFPNFFNLTGPGSPSVLANMVLHSELHVDWVADAIAYLD 470 (549)
T ss_dssp GGCBHHHHTTTSCCCBTTTBCTTCTTEEETTCTTSCGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHhhccchhhccccccCCCCcEEEEeCCCCCCcCccHHHHHHHHHHHHHHHHHHHH
Confidence 222 22 1112222212223578999997 554321 1267788888888776543
No 5
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=3.3e-40 Score=315.91 Aligned_cols=360 Identities=18% Similarity=0.270 Sum_probs=259.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCC----CCCCCCCCCHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPF----PSRTPTFVPRIS 78 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 78 (381)
++||+|||||++|+++|..|++.|.+++|||+++.+||+|....|+.+.++.+...+.+...+. ..+...++++.+
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~e 88 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQPE 88 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHHH
Confidence 4799999999999999999999999999999999999999999999988887766665432221 122234678899
Q ss_pred HHHHHHHHHHHhCC--ccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccC--CCCCCCCCCCCCCCCcc
Q 035902 79 FINYVDNYVSQMGI--NPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATG--ENGLIPEVPGLGSFEGE 154 (381)
Q Consensus 79 ~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG--~~~~~~~~~g~~~~~~~ 154 (381)
+.+|++..++++++ .++++++|++++.++..+.|.|++.++ +.++||+||+||| +.|..|.+||++.|.+.
T Consensus 89 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-----~~~~ad~lV~AtG~~s~p~~p~ipG~~~f~g~ 163 (545)
T 3uox_A 89 MLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE-----EVVTCRFLISATGPLSASRMPDIKGIDSFKGE 163 (545)
T ss_dssp HHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT-----EEEEEEEEEECCCSCBC---CCCTTGGGCCSE
T ss_pred HHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC-----CEEEeCEEEECcCCCCCCcCCCCCCccccCCC
Confidence 99999999999988 678999999999887667899999877 6899999999999 67999999999989898
Q ss_pred eeecCCCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCc----H
Q 035902 155 YMHSSKYENG-------GKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLP----C 223 (381)
Q Consensus 155 ~~~~~~~~~~-------~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~----~ 223 (381)
.+|+..+... ....+++++|||+|.+|+|+|..|++.+.+|+++.|++.+++|..+.++.....+.+. .
T Consensus 164 ~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~p~ 243 (545)
T 3uox_A 164 SFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEKMDSLRNRYPT 243 (545)
T ss_dssp EEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHHHHHHHHTHHH
T ss_pred eEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHHHHHHHhhhHH
Confidence 9999887665 6668999999999999999999999999999999999977888766543333332221 1
Q ss_pred HHHH---------------------------HHHHHH-----------------------------h---hhhhcCcccc
Q 035902 224 KLVD---------------------------FIVVML-----------------------------S---KMKFGNLFKY 244 (381)
Q Consensus 224 ~~~~---------------------------~~~~~~-----------------------------~---~~~~~~~~~~ 244 (381)
.+.. .+...| . +....+.+..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~ 323 (545)
T 3uox_A 244 ILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKIRQRVKDPVVA 323 (545)
T ss_dssp HHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHH
T ss_pred HHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 1000 000000 0 0000111110
Q ss_pred CCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEc---cC-cceEeCCeEEEcCCcEeeccEEEEecCCCCCcchhc
Q 035902 245 GLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVF---PS-ITSINRNEVEFENGKIEEFEAIIFATGYKSTVRNWL 320 (381)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~ 320 (381)
....|. . ....++++.++.++++.+++.+|+++ .. |+++++++|.+.|| ++++|+||+|||+++++..+.
T Consensus 324 ~~l~P~---~--~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~gv~~~dG-~~~~D~IV~ATGf~~~~~~~~ 397 (545)
T 3uox_A 324 EKLIPK---D--HPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEGIKTADA-AYDLDVIIYATGFDAVTGSLD 397 (545)
T ss_dssp HHTSCS---S--SCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTEEEESSC-EEECSEEEECCCCBSSSCSCT
T ss_pred HhCCCC---C--CCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCeEEeCCC-eeecCEEEECCccccccccCC
Confidence 001110 0 12335677888999999999999999 45 99999999999999 999999999999998753221
Q ss_pred cccCCcccccCCC---------CCCCCCCCCCCCCcEEEEe-ccccc-----ccCccHHHHHHHHHhhhcc
Q 035902 321 KRADKDFFDEYGM---------PKRNCPNHWKGENGLYCAG-FSRTG-----LHGISIDAKNIANDINLAL 376 (381)
Q Consensus 321 ~~~~~~~~~~~g~---------~~~~~~~~~~~~~~ifa~G-d~~~~-----~~~a~~~a~~~a~~i~~~l 376 (381)
. ..+...+|. +..-......+.||+|.+. .-... +..+..|+..+++.|....
T Consensus 398 ~---~~i~g~~G~~l~~~w~~~~~~y~g~~~~gfPN~f~~~gp~~~~~~~s~~~~~e~~~~~i~~~i~~~~ 465 (545)
T 3uox_A 398 R---IDIRGKDNVRLIDAWAEGPSTYLGLQARGFPNFFTLVGPHNGSTFCNVGVCGGLQAEWVLRMISYMK 465 (545)
T ss_dssp T---SEEECGGGCBHHHHTTTSCCCBTTTBCTTCTTEEECSSGGGTGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred C---ceEECCCCccHHHhhccccceeeccccCCCCcEEEEeCCCCCCccccHHHHHHHHHHHHHHHHHHHH
Confidence 1 222222332 2221112235789999884 33221 1267788888888876544
No 6
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=5.9e-39 Score=308.68 Aligned_cols=362 Identities=18% Similarity=0.268 Sum_probs=260.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCC----CCCCCCCCCHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPF----PSRTPTFVPRIS 78 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 78 (381)
++||+|||||++|+++|+.|++.|.+++|||+++.+||.|....|+.+.++.+...+.+...+. ..+...++.+.+
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 4899999999999999999999999999999999999999888888877766655544331110 012234677899
Q ss_pred HHHHHHHHHHHhC--CccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCC--CCCCCCCCCCCCCCcc
Q 035902 79 FINYVDNYVSQMG--INPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGE--NGLIPEVPGLGSFEGE 154 (381)
Q Consensus 79 ~~~~~~~~~~~~~--~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~--~~~~~~~~g~~~~~~~ 154 (381)
+.+|++..+++++ ..++++++|++++.+++.+.|.|++.++ ++++||+||+|||. .|..|.+||++.+.|.
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-----~~~~ad~vV~AtG~~s~p~~p~i~G~~~f~G~ 170 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG-----DRIRARYLIMASGQLSVPQLPNFPGLKDFAGN 170 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC-----CEEEEEEEEECCCSCCCCCCCCCTTGGGCCSE
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC-----CEEEeCEEEECcCCCCCCCCCCCCCcccCCCc
Confidence 9999999999886 4578899999999876556899988766 57999999999995 4888999999888898
Q ss_pred eeecCCCC-CCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHH----HHHHHHhhCcHHHHH--
Q 035902 155 YMHSSKYE-NGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVF----AGMLLLKFLPCKLVD-- 227 (381)
Q Consensus 155 ~~~~~~~~-~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~----~~~~~~~~l~~~~~~-- 227 (381)
.+|+..+. +..++.+++++|||+|.+|+|++..+++.+.+|+++.|.+.+.+|..+.+ ....+.+.+|.....
T Consensus 171 ~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~~~p~l~~~~~ 250 (542)
T 1w4x_A 171 LYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKKRYAEFREESR 250 (542)
T ss_dssp EEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHTTHHHHHHHHH
T ss_pred eEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHhhCHHHHHHHH
Confidence 89988876 44566899999999999999999999999999999999996666754432 222222212111000
Q ss_pred ------------------------HHHH-HH-------------------------------hhhhhcCccccCCCCCCC
Q 035902 228 ------------------------FIVV-ML-------------------------------SKMKFGNLFKYGLERPKK 251 (381)
Q Consensus 228 ------------------------~~~~-~~-------------------------------~~~~~~~~~~~~~~~~~~ 251 (381)
.+.. .+ .+....+........|.
T Consensus 251 ~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~- 329 (542)
T 1w4x_A 251 NTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDPEVAERLVPK- 329 (542)
T ss_dssp TSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCC-
T ss_pred hhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCC-
Confidence 0000 00 00000111111111110
Q ss_pred CCcccccccCCCccccchhhhhhcCCCeEEc---cC-cceEeCCeEEEcCCcEeeccEEEEecCCCCCcchhccccCCcc
Q 035902 252 GPFYFKAITGQTPTIDVGAMDKIRKGEIQVF---PS-ITSINRNEVEFENGKIEEFEAIIFATGYKSTVRNWLKRADKDF 327 (381)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~ 327 (381)
.....++++.++.++++.+++.+|+++ .. |+++++++|.+.| +++++|.||+|||+++++..+.. .++
T Consensus 330 ----~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~gv~~~d-~~~~~D~ii~atG~~~~~~~~~~---~~i 401 (542)
T 1w4x_A 330 ----GYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRGVRTSE-REYELDSLVLATGFDALTGALFK---IDI 401 (542)
T ss_dssp ----SSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSEEEESS-CEEECSEEEECCCCCCTTHHHHT---SEE
T ss_pred ----CCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCeEEeCC-eEEecCEEEEcCCccccccCcCc---eee
Confidence 112456778899999999999999998 55 9999999999999 99999999999999998643322 333
Q ss_pred cccCCCCCCC----CC-----CCCCCCCcEEEE-ecccc--cc---cCccHHHHHHHHHhhhcccc
Q 035902 328 FDEYGMPKRN----CP-----NHWKGENGLYCA-GFSRT--GL---HGISIDAKNIANDINLALTD 378 (381)
Q Consensus 328 ~~~~g~~~~~----~~-----~~~~~~~~ifa~-Gd~~~--~~---~~a~~~a~~~a~~i~~~l~~ 378 (381)
...+|....+ .+ ....+.||+|++ |+... .. ..+..|++.++++|....++
T Consensus 402 ~g~~G~~l~~~w~~~~~~y~~~~v~~~Pn~f~~~G~~~~~~~~~~~~~~e~q~~~ia~~i~~~~~~ 467 (542)
T 1w4x_A 402 RGVGNVALKEKWAAGPRTYLGLSTAGFPNLFFIAGPGSPSALSNMLVSIEQHVEWVTDHIAYMFKN 467 (542)
T ss_dssp ECGGGCBHHHHTTTSCCCBTTTBCTTSTTEEESSCTTSSGGGSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHhhcCchheecccccCCCCceEEEcCCCCCcccccHHHHHHHHHHHHHHHHHHHHHC
Confidence 3333322221 11 122477999998 99853 22 27889999999999876543
No 7
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.3e-38 Score=284.22 Aligned_cols=285 Identities=15% Similarity=0.157 Sum_probs=221.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
+.+||+|||||++|+++|..|++.|.+|+|||++...+..+... ..++. ....+..++.+
T Consensus 1 m~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~-------------~~~~~-------~~~~~~~~~~~ 60 (297)
T 3fbs_A 1 MKFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS-------------HGFLG-------QDGKAPGEIIA 60 (297)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC-------------CSSTT-------CTTCCHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh-------------cCCcC-------CCCCCHHHHHH
Confidence 04899999999999999999999999999999976433221100 00000 12356778899
Q ss_pred HHHHHHHHh-CCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCC
Q 035902 82 YVDNYVSQM-GINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSK 160 (381)
Q Consensus 82 ~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~ 160 (381)
++.+.++++ ++.+ .+++|++++.++ +.|.+.+.++ ..+.||+||+|||+.|..|.+||.+.+.+...+.+.
T Consensus 61 ~~~~~~~~~~~v~~-~~~~v~~i~~~~--~~~~v~~~~g-----~~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~ 132 (297)
T 3fbs_A 61 EARRQIERYPTIHW-VEGRVTDAKGSF--GEFIVEIDGG-----RRETAGRLILAMGVTDELPEIAGLRERWGSAVFHCP 132 (297)
T ss_dssp HHHHHHTTCTTEEE-EESCEEEEEEET--TEEEEEETTS-----CEEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCH
T ss_pred HHHHHHHhcCCeEE-EEeEEEEEEEcC--CeEEEEECCC-----CEEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcc
Confidence 999888877 5554 356899998876 6688888776 679999999999999999999998776555566655
Q ss_pred CCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcC
Q 035902 161 YENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGN 240 (381)
Q Consensus 161 ~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (381)
+.+.....+++++|+|+|.+|+|+|..|.+.| +|+++.+.+. .+
T Consensus 133 ~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~-~~---------------------------------- 176 (297)
T 3fbs_A 133 YCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV-EP---------------------------------- 176 (297)
T ss_dssp HHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC-CC----------------------------------
T ss_pred cCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC-CC----------------------------------
Confidence 55555567899999999999999999999998 9999988762 11
Q ss_pred ccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC-cceEeCC-eEEEcCCcEeeccEEEEecCCCCCcch
Q 035902 241 LFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS-ITSINRN-EVEFENGKIEEFEAIIFATGYKSTVRN 318 (381)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~v~~~-~v~~~~g~~~~~D~vi~a~G~~p~~~~ 318 (381)
...+.+.+++.+|+++.. +++++.+ .+.+++|+++++|.|++|+|++|+.+.
T Consensus 177 --------------------------~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~ 230 (297)
T 3fbs_A 177 --------------------------DADQHALLAARGVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRITVDW 230 (297)
T ss_dssp --------------------------CHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCEEEESEEEECCEEECCCSC
T ss_pred --------------------------CHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCcccCchh
Confidence 111244556678888866 8888887 789999999999999999999999853
Q ss_pred hccccCCcc-cc--cCC-CCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHHhhhccccCC
Q 035902 319 WLKRADKDF-FD--EYG-MPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIANDINLALTDHQ 380 (381)
Q Consensus 319 ~~~~~~~~~-~~--~~g-~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~i~~~l~~~~ 380 (381)
+. . .++ ++ +.| ++.+| +..+++.||||++|||++.+. .|..||+.+|.+|...|....
T Consensus 231 -~~-~-~g~~~~~~~~G~~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 295 (297)
T 3fbs_A 231 -IE-K-LGCAVEEGPMGSTIVTD-PMKQTTARGIFACGDVARPAGSVALAVGDGAMAGAAAHRSILFPE 295 (297)
T ss_dssp -HH-H-HTCCEEEETTEEEECCC-TTCBCSSTTEEECSGGGCTTCCHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred -HH-h-cCCccccCCCCceEEeC-CCCccCCCCEEEEeecCCchHHHHHHHHhHHHHHHHHHHHHhhhh
Confidence 33 2 444 33 357 88888 557789999999999998544 899999999999999887643
No 8
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=5.7e-38 Score=295.51 Aligned_cols=303 Identities=21% Similarity=0.326 Sum_probs=229.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCCCCCCCcCCCCCC-------------------------------
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSV--PNIILEREDCSASLWKKRAYD------------------------------- 48 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~~~g~~~~~~~~~------------------------------- 48 (381)
+.+||+|||||++|+++|..|++.|. +|+|||+++.+||.|......
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35899999999999999999999999 999999999999988754211
Q ss_pred --CeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCc-eE
Q 035902 49 --RMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDA-YE 125 (381)
Q Consensus 49 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~-~~ 125 (381)
.+....+.....+..++++...+.++.+.++.+|+++++++++..++++++|++++..+ +.|.|++.+...++ ..
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~~~V~~~~~~~G~~~~ 162 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKD--GSWVVTYKGTKAGSPIS 162 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEET--TEEEEEEEESSTTCCEE
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCC--CeEEEEEeecCCCCeeE
Confidence 11111122223344455555556678889999999999998887888999999998865 67889887622222 34
Q ss_pred EEEeCEEEEccCC--CCCCCCCCCCCCC----CcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCe-eEEE
Q 035902 126 EYVARYLVVATGE--NGLIPEVPGLGSF----EGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGAC-TSIV 198 (381)
Q Consensus 126 ~~~~d~vIlAtG~--~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~-v~~i 198 (381)
.+.||+||+|||. .|..|.++|++.+ ++.+.|+..+.+...+.+++++|||+|.+|+|+|..|++.+.+ |+++
T Consensus 163 ~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~ 242 (447)
T 2gv8_A 163 KDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAKHPIYQS 242 (447)
T ss_dssp EEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSCSSEEEE
T ss_pred EEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhCCcEEEE
Confidence 7999999999999 5888889987643 4568888888777677899999999999999999999999999 9999
Q ss_pred EecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCC
Q 035902 199 VRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGE 278 (381)
Q Consensus 199 ~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (381)
.|++. + ++..+
T Consensus 243 ~r~~~-~--------------------------------------------------------------------l~~~~ 253 (447)
T 2gv8_A 243 LLGGG-D--------------------------------------------------------------------IQNES 253 (447)
T ss_dssp CTTCC-S--------------------------------------------------------------------CBCSS
T ss_pred eCCCC-c--------------------------------------------------------------------CCCCC
Confidence 98872 1 13345
Q ss_pred eEEccCcceEe--CCeEEEcCCcE-eeccEEEEecCCCCCcchh----ccccCCcccccCCCCCCCCCCC--CCCCCcEE
Q 035902 279 IQVFPSITSIN--RNEVEFENGKI-EEFEAIIFATGYKSTVRNW----LKRADKDFFDEYGMPKRNCPNH--WKGENGLY 349 (381)
Q Consensus 279 v~~~~~v~~v~--~~~v~~~~g~~-~~~D~vi~a~G~~p~~~~~----~~~~~~~~~~~~g~~~~~~~~~--~~~~~~if 349 (381)
|.+...|+++. +.+|.+.||++ +++|.||+|||++|+++++ +. ...+-+..+++..++.... .++.|+||
T Consensus 254 i~~~~~v~~~~~~~~~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~-~~~~~i~~~~~~~~~~~~~v~~~~~p~l~ 332 (447)
T 2gv8_A 254 LQQVPEITKFDPTTREIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLK-SPETKLIDDGSHVHNVYQHIFYIPDPTLA 332 (447)
T ss_dssp EEEECCEEEEETTTTEEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCC-STTTCCCSSSSSCCSEETTTEETTCTTEE
T ss_pred eEEecCeEEEecCCCEEEECCCCEeccCCEEEECCCCCcCCCCCcccccc-cccCceecCCCcccccccccccCCCCcEE
Confidence 66555577884 35799999986 7999999999999998641 33 2111123355555541111 26789999
Q ss_pred EEeccccccc--CccHHHHHHHHHhhhcc
Q 035902 350 CAGFSRTGLH--GISIDAKNIANDINLAL 376 (381)
Q Consensus 350 a~Gd~~~~~~--~a~~~a~~~a~~i~~~l 376 (381)
++||+..... .|..||+.+|++|.+.+
T Consensus 333 ~~G~~~~~~~~~~a~~qa~~~a~~~~g~~ 361 (447)
T 2gv8_A 333 FVGLALHVVPFPTSQAQAAFLARVWSGRL 361 (447)
T ss_dssp ESSCCBSSCHHHHHHHHHHHHHHHHTTSS
T ss_pred EEeccccccCchHHHHHHHHHHHHHcCCC
Confidence 9999976533 88899999999998754
No 9
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=100.00 E-value=1.6e-38 Score=286.89 Aligned_cols=286 Identities=16% Similarity=0.233 Sum_probs=224.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.+||+|||||++|+++|+.|++.|.+|+|||++ +||.|.... ....++.++ .....++.++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~----------~~~~~~~~~-------~~~~~~~~~~ 75 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAG----------IVDDYLGLI-------EIQASDMIKV 75 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCC----------EECCSTTST-------TEEHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccc----------cccccCCCC-------CCCHHHHHHH
Confidence 479999999999999999999999999999998 777665410 001111111 1456789999
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKYE 162 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (381)
+.+.++++++++++ ++|.+++.++ +.|.+.+.++ ..+.||+||+|||+.|..|.++|...+.+..++.....
T Consensus 76 ~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~g-----~~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~ 147 (323)
T 3f8d_A 76 FNKHIEKYEVPVLL-DIVEKIENRG--DEFVVKTKRK-----GEFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVA 147 (323)
T ss_dssp HHHHHHTTTCCEEE-SCEEEEEEC----CEEEEESSS-----CEEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHH
T ss_pred HHHHHHHcCCEEEE-EEEEEEEecC--CEEEEEECCC-----CEEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccC
Confidence 99999999999888 8999998865 5677888775 57999999999999999999999887665556555444
Q ss_pred CCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCcc
Q 035902 163 NGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLF 242 (381)
Q Consensus 163 ~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 242 (381)
+.....+++++|+|+|.+|+|+|..|.+.+.+|+++.|.+ .+.+..
T Consensus 148 ~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~-~~~~~~--------------------------------- 193 (323)
T 3f8d_A 148 DAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD-TFKAQP--------------------------------- 193 (323)
T ss_dssp HGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS-SCCSCH---------------------------------
T ss_pred CHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC-CCCcCH---------------------------------
Confidence 4445578999999999999999999999999999999988 443310
Q ss_pred ccCCCCCCCCCcccccccCCCccccchhhhh-hcCCCeEEccC--cceEeCC----eEEEcC---Cc--EeeccEEEEec
Q 035902 243 KYGLERPKKGPFYFKAITGQTPTIDVGAMDK-IRKGEIQVFPS--ITSINRN----EVEFEN---GK--IEEFEAIIFAT 310 (381)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~--v~~v~~~----~v~~~~---g~--~~~~D~vi~a~ 310 (381)
.+.+. .++.+|+++.+ +.++..+ .+.+.+ |+ ++++|.||+|+
T Consensus 194 --------------------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~ 247 (323)
T 3f8d_A 194 --------------------------IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEI 247 (323)
T ss_dssp --------------------------HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECC
T ss_pred --------------------------HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEE
Confidence 11222 23458999888 8888765 477765 76 79999999999
Q ss_pred CCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccc---cc---CccHHHHHHHHHhhhccccC
Q 035902 311 GYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTG---LH---GISIDAKNIANDINLALTDH 379 (381)
Q Consensus 311 G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~---~~---~a~~~a~~~a~~i~~~l~~~ 379 (381)
|++|+.+. +. . .++ ++++|++.+| +..+++.||||++|||++. +. .|..||+.+|++|...+.+.
T Consensus 248 G~~p~~~~-~~-~-~g~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 319 (323)
T 3f8d_A 248 GFDPPTDF-AK-S-NGIETDTNGYIKVD-EWMRTSVPGVFAAGDCTSAWLGFRQVITAVAQGAVAATSAYRYVTEK 319 (323)
T ss_dssp CEECCHHH-HH-H-TTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBSTTTTCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCChhH-Hh-h-cCeeecCCCcEecC-CCceecCCCEEEcceecCCCCcccceeehhhHHHHHHHHHHHHHHHh
Confidence 99999853 43 3 555 6889999999 5677899999999999885 22 89999999999999988654
No 10
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=100.00 E-value=4.9e-38 Score=284.14 Aligned_cols=290 Identities=17% Similarity=0.236 Sum_probs=219.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
++||+|||||++|+++|..|++.|.+|+|||++ .+||.|..... +..++.+ +......++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~------~~~~~~~~~~~~ 70 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEE----------VENFPGF------PEPIAGMELAQR 70 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSC----------BCCSTTC------SSCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCcccccccc----------cccCCCC------CCCCCHHHHHHH
Confidence 489999999999999999999999999999998 57776543210 0011111 223456788899
Q ss_pred HHHHHHHhCCccccccEEEEEEEe--CCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYD--ENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSK 160 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~ 160 (381)
+.+.+++++++++. ++|.+++.. + ...|.+.+.++ ..+.||+||+|||+.|..|.++|.+.+.+..++...
T Consensus 71 l~~~~~~~gv~~~~-~~v~~i~~~~~~-~~~~~v~~~~g-----~~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~ 143 (325)
T 2q7v_A 71 MHQQAEKFGAKVEM-DEVQGVQHDATS-HPYPFTVRGYN-----GEYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCA 143 (325)
T ss_dssp HHHHHHHTTCEEEE-CCEEEEEECTTS-SSCCEEEEESS-----CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCH
T ss_pred HHHHHHHcCCEEEe-eeEEEEEeccCC-CceEEEEECCC-----CEEEeCEEEECcCCCcCCCCCCChhhccCceEEEec
Confidence 99999999998876 688888876 3 12266777665 579999999999999998889998766554455543
Q ss_pred CCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcC
Q 035902 161 YENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGN 240 (381)
Q Consensus 161 ~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (381)
..+.....+++++|||+|.+|+|+|..|.+.+.+|+++.|.+ .+.+.
T Consensus 144 ~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~-------------------------------- 190 (325)
T 2q7v_A 144 TCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRD-TLRAN-------------------------------- 190 (325)
T ss_dssp HHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSC--------------------------------
T ss_pred cCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCC-cCCcc--------------------------------
Confidence 333334468999999999999999999999999999999887 32110
Q ss_pred ccccCCCCCCCCCcccccccCCCccccchhhhhh-cCCCeEEccC--cceEeCC----eEEEc---CCc--EeeccEEEE
Q 035902 241 LFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKI-RKGEIQVFPS--ITSINRN----EVEFE---NGK--IEEFEAIIF 308 (381)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--v~~v~~~----~v~~~---~g~--~~~~D~vi~ 308 (381)
..+.+.+ ++.+|+++.+ ++++..+ ++.++ +|+ ++++|.||+
T Consensus 191 ---------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 243 (325)
T 2q7v_A 191 ---------------------------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFI 243 (325)
T ss_dssp ---------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred ---------------------------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEE
Confidence 0012222 3468888887 7787654 56665 565 789999999
Q ss_pred ecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc-c---CccHHHHHHHHHhhhccccCC
Q 035902 309 ATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-H---GISIDAKNIANDINLALTDHQ 380 (381)
Q Consensus 309 a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-~---~a~~~a~~~a~~i~~~l~~~~ 380 (381)
|+|++|+++ ++. . .-.++++|++.+| +.++++.||||++|||.+.. . .|..||+.+|.+|...|.+.+
T Consensus 244 a~G~~p~~~-~l~-~-~~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 315 (325)
T 2q7v_A 244 FIGHVPNTA-FVK-D-TVSLRDDGYVDVR-DEIYTNIPMLFAAGDVSDYIYRQLATSVGAGTRAAMMTERQLAALE 315 (325)
T ss_dssp CSCEEESCG-GGT-T-TSCBCTTSCBCCB-TTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred ccCCCCChH-HHh-h-hcccCCCccEecC-CCCccCCCCEEEeecccCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999985 344 3 3226778999999 45678899999999998752 2 899999999999999886653
No 11
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=100.00 E-value=2.9e-38 Score=283.86 Aligned_cols=287 Identities=18% Similarity=0.266 Sum_probs=217.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV-PNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
+||+|||||++|+++|..|++.|. +|+|||++ ..||.|..... ...++. ++......++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 64 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSE----------IENYPG------VKEVVSGLDFMQP 64 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSC----------BCCSTT------CCSCBCHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCcccccccc----------cccCCC------CcccCCHHHHHHH
Confidence 799999999999999999999999 99999995 56665543210 001111 1224567889999
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKYE 162 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (381)
+.+.++++++++++ ++|.+++.++ +.|.+.+.++ ..++||+||+|||+.|..|+++|.+.+.+..++.....
T Consensus 65 l~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~~~g-----~~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~~~~~ 136 (311)
T 2q0l_A 65 WQEQCFRFGLKHEM-TAVQRVSKKD--SHFVILAEDG-----KTFEAKSVIIATGGSPKRTGIKGESEYWGKGVSTCATC 136 (311)
T ss_dssp HHHHHHTTSCEEEC-SCEEEEEEET--TEEEEEETTS-----CEEEEEEEEECCCEEECCCCCBTHHHHBTTTEESCHHH
T ss_pred HHHHHHHcCCEEEE-EEEEEEEEcC--CEEEEEEcCC-----CEEECCEEEECCCCCCCCCCCCChhhccCCcEEEeecC
Confidence 99989888998877 7899998876 5677777655 57999999999999998888888754433334444333
Q ss_pred CCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCcc
Q 035902 163 NGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLF 242 (381)
Q Consensus 163 ~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 242 (381)
+.....+++++|||+|.+|+|+|..|.+.|.+|+++.|++ .+.. .
T Consensus 137 ~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~--~-------------------------------- 181 (311)
T 2q0l_A 137 DGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRD-GFRC--A-------------------------------- 181 (311)
T ss_dssp HGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSS-SCCS--C--------------------------------
T ss_pred ChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCC-ccCC--C--------------------------------
Confidence 3333467999999999999999999999999999999887 3211 0
Q ss_pred ccCCCCCCCCCcccccccCCCccccchhhhhhc-CCCeEEccC--cceEeCC-----eEEEc---CCc--EeeccEEEEe
Q 035902 243 KYGLERPKKGPFYFKAITGQTPTIDVGAMDKIR-KGEIQVFPS--ITSINRN-----EVEFE---NGK--IEEFEAIIFA 309 (381)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~--v~~v~~~-----~v~~~---~g~--~~~~D~vi~a 309 (381)
..+.+.+. +.+|+++.+ +.++..+ .+.++ +|+ ++++|.||+|
T Consensus 182 -------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a 236 (311)
T 2q0l_A 182 -------------------------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIF 236 (311)
T ss_dssp -------------------------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEEC
T ss_pred -------------------------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEE
Confidence 01122333 468888887 7777653 46665 675 7899999999
Q ss_pred cCCCCCcchhccccCC----cc-cccCCCCCCCCCCCCCCCCcEEEEeccccc-cc---CccHHHHHHHHHhhhccccC
Q 035902 310 TGYKSTVRNWLKRADK----DF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTG-LH---GISIDAKNIANDINLALTDH 379 (381)
Q Consensus 310 ~G~~p~~~~~~~~~~~----~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~-~~---~a~~~a~~~a~~i~~~l~~~ 379 (381)
+|++|+++. +. . . ++ ++++|++.+| +.++++.||||++|||.+. +. .|..||+.+|++|.+.|.++
T Consensus 237 ~G~~p~~~~-l~-~-~g~~~~l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 311 (311)
T 2q0l_A 237 VGYDVNNAV-LK-Q-EDNSMLCKCDEYGSIVVD-FSMKTNVQGLFAAGDIRIFAPKQVVCAASDGATAALSVISYLEHH 311 (311)
T ss_dssp SCEEECCGG-GB-C-TTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred ecCccChhh-hh-c-ccccceeEeccCCCEEeC-CccccCCCCeEEcccccCcchHHHHHHHHhHHHHHHHHHHHHhhC
Confidence 999999854 33 3 3 24 6778999999 5677899999999999875 22 89999999999999988653
No 12
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=100.00 E-value=1.8e-38 Score=287.82 Aligned_cols=291 Identities=17% Similarity=0.240 Sum_probs=227.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.+||+|||||++|+++|+.|++.|.+|+|||+++.+||.|... ++.... ..++.++ .....++..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~-~~~~~~------~~~~~~~-------~~~~~~~~~~ 72 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSAL-YPEKYI------YDVAGFP-------KIRAQELINN 72 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHH-CTTSEE------CCSTTCS-------SEEHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhc-CCCceE------eccCCCC-------CCCHHHHHHH
Confidence 3799999999999999999999999999999999999887431 211111 1111111 1246789999
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCC---CCCCCCCCCCCCCCcceeecC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGE---NGLIPEVPGLGSFEGEYMHSS 159 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~---~~~~~~~~g~~~~~~~~~~~~ 159 (381)
+.+.++++++.++++++|.+++... .+.|.|.+.++ + +.||+||+|||+ .|..|.++|.+.+.+..++.
T Consensus 73 ~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~g-----~-~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~- 144 (332)
T 3lzw_A 73 LKEQMAKFDQTICLEQAVESVEKQA-DGVFKLVTNEE-----T-HYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY- 144 (332)
T ss_dssp HHHHHTTSCCEEECSCCEEEEEECT-TSCEEEEESSE-----E-EEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-
T ss_pred HHHHHHHhCCcEEccCEEEEEEECC-CCcEEEEECCC-----E-EEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-
Confidence 9999999999999999999998875 24788888775 3 999999999999 78888899987766666666
Q ss_pred CCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhc
Q 035902 160 KYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFG 239 (381)
Q Consensus 160 ~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (381)
.+.+...+.+++++|||+|.+|+|+|..|.+.+.+|+++.|.+ .+.+...
T Consensus 145 ~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~-~~~~~~~----------------------------- 194 (332)
T 3lzw_A 145 FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRD-KFRAHEH----------------------------- 194 (332)
T ss_dssp SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSS-SCSSCHH-----------------------------
T ss_pred ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecC-cCCccHH-----------------------------
Confidence 5555556678999999999999999999999999999999987 3322110
Q ss_pred CccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eEEEcC-----CcEeeccEEEE
Q 035902 240 NLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EVEFEN-----GKIEEFEAIIF 308 (381)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v~~~~-----g~~~~~D~vi~ 308 (381)
..+.+++.+|+++.+ +.++..+ .+.+.+ ++++++|.||+
T Consensus 195 ------------------------------~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~ 244 (332)
T 3lzw_A 195 ------------------------------SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIV 244 (332)
T ss_dssp ------------------------------HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEE
T ss_pred ------------------------------HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEE
Confidence 123345678888887 8888765 377766 45799999999
Q ss_pred ecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccc---ccc---CccHHHHHHHHHhhhccccC
Q 035902 309 ATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRT---GLH---GISIDAKNIANDINLALTDH 379 (381)
Q Consensus 309 a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~---~~~---~a~~~a~~~a~~i~~~l~~~ 379 (381)
|+|++|+.+. +. . .++-.++|++.+| +..+++.||||++|||+. .+. .|..||+.+|++|...++..
T Consensus 245 a~G~~p~~~~-~~-~-~~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 317 (332)
T 3lzw_A 245 NYGFVSSLGP-IK-N-WGLDIEKNSIVVK-STMETNIEGFFAAGDICTYEGKVNLIASGFGEAPTAVNNAKAYMDPK 317 (332)
T ss_dssp CCCEECCCGG-GG-G-SSCCEETTEEECC-TTSBCSSTTEEECGGGEECTTCCCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred eeccCCCchH-Hh-h-cCccccCCeEEeC-CCCceecCCEEEccceecCCCCcceEeeehhhHHHHHHHHHHhhChh
Confidence 9999999864 43 3 5653378899998 566788999999999984 332 88899999999999988653
No 13
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2e-38 Score=285.01 Aligned_cols=287 Identities=18% Similarity=0.246 Sum_probs=200.1
Q ss_pred CC--cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcC-CCCCCCeeeecCCcccccCCCCCCCCCCCCCCHH
Q 035902 1 ME--EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWK-KRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRI 77 (381)
Q Consensus 1 M~--~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (381)
|+ +|||+||||||||++||..|++.|.+|+|||+.. +||... .... ..++.+ ......
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~-~gG~~~~~~~i-----------~~~p~~-------~~~~~~ 62 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI-PGGQMANTEEV-----------ENFPGF-------EMITGP 62 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCB-----------CCSTTC-------SSBCHH
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCeeeccccc-----------CCcCCc-------cccchH
Confidence 65 4899999999999999999999999999999864 554321 1111 011111 123456
Q ss_pred HHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceee
Q 035902 78 SFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMH 157 (381)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~ 157 (381)
++.........+....+..+..+....... . . +...++ .+++||+||||||+.|..|++||.+.+.+..++
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~-~~~~~~-----~~~~~d~liiAtGs~~~~~~ipG~~~~~~~~v~ 133 (312)
T 4gcm_A 63 DLSTKMFEHAKKFGAVYQYGDIKSVEDKGE--Y-K-VINFGN-----KELTAKAVIIATGAEYKKIGVPGEQELGGRGVS 133 (312)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEEECSS--C-E-EEECSS-----CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEE
T ss_pred HHHHHHHHHHhhccccccceeeeeeeeeec--c-e-eeccCC-----eEEEeceeEEcccCccCcCCCCChhhhCCccEE
Confidence 677666666666666665555444443322 2 1 333333 689999999999999999999998877666666
Q ss_pred cCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhh
Q 035902 158 SSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMK 237 (381)
Q Consensus 158 ~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (381)
++...+...+.+++++|||+|++|+|+|..|++.|.+|++++|++ .+++.....
T Consensus 134 ~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~~~~~~~~------------------------- 187 (312)
T 4gcm_A 134 YCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD-ELRAQRILQ------------------------- 187 (312)
T ss_dssp SCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSCHHHH-------------------------
T ss_pred eeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc-ccCcchhHH-------------------------
Confidence 665555556678999999999999999999999999999999998 555543221
Q ss_pred hcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEe--CC-----eEE---EcCCcEeeccE
Q 035902 238 FGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSIN--RN-----EVE---FENGKIEEFEA 305 (381)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~--~~-----~v~---~~~g~~~~~D~ 305 (381)
...++..++..... +.... .. ... ..++..+++|.
T Consensus 188 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 234 (312)
T 4gcm_A 188 ---------------------------------DRAFKNDKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADG 234 (312)
T ss_dssp ---------------------------------HHHHHCTTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSE
T ss_pred ---------------------------------HHHHHhcCcceeeecceeeeeccccccccceeeeecCCceeEEeeee
Confidence 01111222222222 11111 11 111 12335789999
Q ss_pred EEEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc-c---CccHHHHHHHHHhhhcccc
Q 035902 306 IIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-H---GISIDAKNIANDINLALTD 378 (381)
Q Consensus 306 vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-~---~a~~~a~~~a~~i~~~l~~ 378 (381)
+++++|.+|+.... . . .++.+++|++.+| +.++|+.|||||+|||++.. . .|..||+.+|++|+++|+.
T Consensus 235 v~~~~g~~~~~~~~-~-~-~g~~~~~G~I~vd-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~ 307 (312)
T 4gcm_A 235 VFIYIGMKPLTAPF-K-D-LGITNDVGYIVTK-DDMTTSVPGIFAAGDVRDKGLRQIVTATGDGSIAAQSAAEYIEH 307 (312)
T ss_dssp EEECSCEEESCGGG-G-G-GTCBCTTSCBCCC-TTSBCSSTTEEECSTTBSCSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCCCcCchhH-H-h-cceecCCCeEeeC-CCCccCCCCEEEEeecCCCcchHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999998533 3 2 6777889999999 67789999999999998643 2 7899999999999998853
No 14
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=100.00 E-value=9.6e-39 Score=287.39 Aligned_cols=295 Identities=16% Similarity=0.213 Sum_probs=202.8
Q ss_pred CCc-ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHH
Q 035902 1 MEE-VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISF 79 (381)
Q Consensus 1 M~~-~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (381)
|++ |||+||||||||++||..|+++|++|+|||+....+..+....+.. .....++. ++...+..++
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~------~~i~~~~g------~~~~i~~~~l 68 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTT------TIIENFPG------FPNGIDGNEL 68 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGS------SEECCSTT------CTTCEEHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCCh------HHhhhccC------CcccCCHHHH
Confidence 765 9999999999999999999999999999998752221111111110 00111111 2334456788
Q ss_pred HHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecC
Q 035902 80 INYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSS 159 (381)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~ 159 (381)
...+.+.+++++..+... .+....... ..+.+.+.++ .++.||+||+|||+.|+.|++||.+...+...+..
T Consensus 69 ~~~~~~~~~~~~~~~~~~-~v~~~~~~~--~~~~~~~~~~-----~~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~ 140 (314)
T 4a5l_A 69 MMNMRTQSEKYGTTIITE-TIDHVDFST--QPFKLFTEEG-----KEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSAC 140 (314)
T ss_dssp HHHHHHHHHHTTCEEECC-CEEEEECSS--SSEEEEETTC-----CEEEEEEEEECCCEEECCCCCTTHHHHBTTTEESC
T ss_pred HHHHHHHHhhcCcEEEEe-EEEEeecCC--CceEEEECCC-----eEEEEeEEEEcccccccccCCCccccccccceeee
Confidence 888888888888776543 455555443 4454555554 68999999999999999999999765444444444
Q ss_pred CCCCCC--CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhh
Q 035902 160 KYENGG--KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMK 237 (381)
Q Consensus 160 ~~~~~~--~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (381)
...... ...+++++|||+|.+|+|+|..|+++|.+|+++.|.+. ..+.... .
T Consensus 141 ~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~-~~~~~~~--~----------------------- 194 (314)
T 4a5l_A 141 AICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA-FRASKTM--Q----------------------- 194 (314)
T ss_dssp HHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS-CCSCHHH--H-----------------------
T ss_pred hhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc-ccccchh--h-----------------------
Confidence 433222 24689999999999999999999999999999998873 2221110 0
Q ss_pred hcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC-----eEEE-----cCCcEeeccE
Q 035902 238 FGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN-----EVEF-----ENGKIEEFEA 305 (381)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~-----~v~~-----~~g~~~~~D~ 305 (381)
.......++..+.. +.++... ++.+ .+++++++|.
T Consensus 195 ---------------------------------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~ 241 (314)
T 4a5l_A 195 ---------------------------------ERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAG 241 (314)
T ss_dssp ---------------------------------HHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSE
T ss_pred ---------------------------------hhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeecccc
Confidence 11112222333322 2233221 2322 2456899999
Q ss_pred EEEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEeccccccc----CccHHHHHHHHHhhhccccC
Q 035902 306 IIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH----GISIDAKNIANDINLALTDH 379 (381)
Q Consensus 306 vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~----~a~~~a~~~a~~i~~~l~~~ 379 (381)
+++++|++||++. +. . ...++++|++. + +.++|+.|||||+|||++.+. .|+.||+.+|.+|.++|++|
T Consensus 242 vi~a~G~~pn~~~-l~-~-~~~~~~~G~iv-~-~~~~Ts~pgIyA~GDv~~~~~~~~~~A~~~G~~AA~~~~~yL~~H 314 (314)
T 4a5l_A 242 LFYAIGHSPNSKF-LG-G-QVKTADDGYIL-T-EGPKTSVDGVFACGDVCDRVYRQAIVAAGSGCMAALSCEKWLQTH 314 (314)
T ss_dssp EEECSCEEESCGG-GT-T-SSCBCTTSCBC-C-BTTBCSSTTEEECSTTTCSSCCCHHHHHHHHHHHHHHHHHHHHTC
T ss_pred ceEecccccChhH-hc-c-cceEcCCeeEe-C-CCCccCCCCEEEEEeccCCcchHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999964 33 2 34478888774 4 367899999999999987654 68899999999999999987
No 15
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=100.00 E-value=3.6e-38 Score=282.12 Aligned_cols=286 Identities=18% Similarity=0.240 Sum_probs=206.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
|++|||+||||||||++||+.|++.|.+|+|||++. .+|.+... ++.++. ....+..++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~---------------~~~~~~----~~~~~~~~~~ 63 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN---------------SHGFIT----RDGIKPEEFK 63 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC---------------BCCSTT----CTTBCHHHHH
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee---------------cCCccC----CCCCCHHHHH
Confidence 888999999999999999999999999999999975 34322111 111111 1123456676
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCC
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSK 160 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~ 160 (381)
+...+.+.+++........+..+...+ .+.+.+.+.++ ++++||+||||||+.|..|++||.+.+.+..+..+.
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~g-----~~~~a~~liiATGs~p~~p~i~G~~~~~~~~v~~~~ 137 (304)
T 4fk1_A 64 EIGLNEVMKYPSVHYYEKTVVMITKQS-TGLFEIVTKDH-----TKYLAERVLLATGMQEEFPSIPNVREYYGKSLFSCP 137 (304)
T ss_dssp HHHHHHHTTSTTEEEEECCEEEEEECT-TSCEEEEETTC-----CEEEEEEEEECCCCEEECCSCTTHHHHBTTTEESCH
T ss_pred HHHHHHHHhcCCEEEEeeEEEEeeecC-CCcEEEEECCC-----CEEEeCEEEEccCCccccccccCccccccceeeecc
Confidence 666666666654445555666665544 35677887776 689999999999999999999997765554455554
Q ss_pred CCCCCCCCCCeEEEEcCCCC-HHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhc
Q 035902 161 YENGGKFIGKNVLVVGCGNS-GMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFG 239 (381)
Q Consensus 161 ~~~~~~~~~~~v~viG~G~~-~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (381)
..+.....+++++|||||.. ++++|..+.+.+.+|+++.|.+ .+.+
T Consensus 138 ~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~-~~~~-------------------------------- 184 (304)
T 4fk1_A 138 YCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN-ELSQ-------------------------------- 184 (304)
T ss_dssp HHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC-CCCH--------------------------------
T ss_pred ccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccc-cchh--------------------------------
Confidence 44445556788888888865 6789999999999999988776 2211
Q ss_pred CccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC-cceEeCC-----eEEEcCCcEeeccEEEEecCCC
Q 035902 240 NLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS-ITSINRN-----EVEFENGKIEEFEAIIFATGYK 313 (381)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~v~~~-----~v~~~~g~~~~~D~vi~a~G~~ 313 (381)
...+.+++.++.++.. +..+..+ .+.+++|+++++|.++++.|.+
T Consensus 185 -----------------------------~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~ 235 (304)
T 4fk1_A 185 -----------------------------TIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFF 235 (304)
T ss_dssp -----------------------------HHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEE
T ss_pred -----------------------------hhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccc
Confidence 1133344555566655 5555543 5788999999999988888777
Q ss_pred CCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc----CccHHHHHHHHHhhhcccc
Q 035902 314 STVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH----GISIDAKNIANDINLALTD 378 (381)
Q Consensus 314 p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~----~a~~~a~~~a~~i~~~l~~ 378 (381)
|+... +. . .++ ++++|++.+| +.++|+.|||||+|||++.+. .|+.||+.+|.+|.++|.+
T Consensus 236 ~~~~~-~~-~-~g~~~~~~G~I~vd-~~~~Ts~p~IyA~GDv~~~~~~~~~~A~~~G~~AA~~i~~~L~~ 301 (304)
T 4fk1_A 236 RPNQF-IE-Q-LGCELQSNGTFVID-DFGRTSEKNIYLAGETTTQGPSSLIIAASQGNKAAIAINSDITD 301 (304)
T ss_dssp CSSCH-HH-H-TTCCCCTTSSSCSS-TTCBCSSTTEEECSHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCChh-hh-h-cCeEECCCCCEEEC-cCCccCCCCEEEEeccCCCcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 76644 33 3 666 8899999999 677899999999999986432 7889999999999998865
No 16
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=100.00 E-value=4.6e-38 Score=285.82 Aligned_cols=292 Identities=17% Similarity=0.216 Sum_probs=222.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecC----CCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERE----DCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRIS 78 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (381)
.+||+|||||++|+++|+.|++.|.+|+|||+. ...||.|.... ....++ .++......+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~----------~~~~~~------~~~~~~~~~~ 85 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT----------EIENFP------GFPDGLTGSE 85 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS----------EECCST------TCTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch----------hhcccC------CCcccCCHHH
Confidence 489999999999999999999999999999994 46777665321 011111 1133456789
Q ss_pred HHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeec
Q 035902 79 FINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHS 158 (381)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~ 158 (381)
+..++.+.++++++++++++ |.+++.+. +.|.+.+.... +...+.||+||+|+|+.|..|.++|.+.+.+..++.
T Consensus 86 ~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~~~v~~~~~~--~~~~~~~d~vvlAtG~~~~~~~~~g~~~~~~~~~~~ 160 (338)
T 3itj_A 86 LMDRMREQSTKFGTEIITET-VSKVDLSS--KPFKLWTEFNE--DAEPVTTDAIILATGASAKRMHLPGEETYWQKGISA 160 (338)
T ss_dssp HHHHHHHHHHHTTCEEECSC-EEEEECSS--SSEEEEETTCS--SSCCEEEEEEEECCCEEECCCCCTTHHHHBTTTEES
T ss_pred HHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CEEEEEEEecC--CCcEEEeCEEEECcCCCcCCCCCCCchhccCccEEE
Confidence 99999999999999999888 98888765 66767663111 115689999999999999998898876544444554
Q ss_pred CCCCCCC--CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhh
Q 035902 159 SKYENGG--KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKM 236 (381)
Q Consensus 159 ~~~~~~~--~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 236 (381)
....... ...+++++|||+|.+|+|+|..|.+.+.+|+++.|.+ .+.+.
T Consensus 161 ~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~-~~~~~---------------------------- 211 (338)
T 3itj_A 161 CAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKD-HLRAS---------------------------- 211 (338)
T ss_dssp CHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-SCCSC----------------------------
T ss_pred chhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccCCC----------------------------
Confidence 4333322 4468999999999999999999999999999999988 33221
Q ss_pred hhcCccccCCCCCCCCCcccccccCCCccccchhhhhhc-CCCeEEccC--cceEeCCe-----EEEcC-----CcEeec
Q 035902 237 KFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIR-KGEIQVFPS--ITSINRNE-----VEFEN-----GKIEEF 303 (381)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~--v~~v~~~~-----v~~~~-----g~~~~~ 303 (381)
..+.+.+. ..+|+++.+ +.++..+. +.+++ ++++++
T Consensus 212 -------------------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~ 260 (338)
T 3itj_A 212 -------------------------------TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPV 260 (338)
T ss_dssp -------------------------------HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEEC
T ss_pred -------------------------------HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEe
Confidence 11133333 348999887 88887652 77766 468999
Q ss_pred cEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccccc-c---CccHHHHHHHHHhhhcccc
Q 035902 304 EAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-H---GISIDAKNIANDINLALTD 378 (381)
Q Consensus 304 D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-~---~a~~~a~~~a~~i~~~l~~ 378 (381)
|.||+|+|++|+.. ++. . ++ ++++|++.++.....++.||||++|||+... . .|+.+|+.+|.+|...|++
T Consensus 261 D~vi~a~G~~p~~~-~~~-~--~l~~~~~G~i~v~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 336 (338)
T 3itj_A 261 SGLFYAIGHTPATK-IVA-G--QVDTDEAGYIKTVPGSSLTSVPGFFAAGDVQDSKYRQAITSAGSGCMAALDAEKYLTS 336 (338)
T ss_dssp SEEEECSCEEECCG-GGB-T--TBCBCTTSCBCCCTTSSBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEEEeCCCCChh-Hhh-C--ceEecCCCcEEEcCcccccCCCCEEEeeccCCCCccceeeehhhhHHHHHHHHHHHhc
Confidence 99999999999984 444 2 55 7789999975466778999999999999642 2 8899999999999999876
Q ss_pred C
Q 035902 379 H 379 (381)
Q Consensus 379 ~ 379 (381)
.
T Consensus 337 ~ 337 (338)
T 3itj_A 337 L 337 (338)
T ss_dssp C
T ss_pred C
Confidence 4
No 17
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=1.7e-37 Score=281.75 Aligned_cols=296 Identities=18% Similarity=0.206 Sum_probs=221.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
+++||+|||||++|+++|+.|++.|.+|+|||+++.+||.|... ++... ++..+.+ + .....++.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~------~-~~~~~~~~~ 69 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKY------IYDVAGF------P-KVYAKDLVK 69 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSE------ECCSTTC------S-SEEHHHHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCce------eeccCCC------C-CCCHHHHHH
Confidence 35899999999999999999999999999999999888876432 11111 0111111 1 124577888
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC---CCCCCCCCCCCCCcceeec
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN---GLIPEVPGLGSFEGEYMHS 158 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~---~~~~~~~g~~~~~~~~~~~ 158 (381)
++.+.++++++.++++++|..++.++ +.|.|.+.++ ..+.||+||+|||+. |..|+++|.+.+.+..++.
T Consensus 70 ~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~~~g-----~~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~ 142 (335)
T 2zbw_A 70 GLVEQVAPFNPVYSLGERAETLEREG--DLFKVTTSQG-----NAYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYY 142 (335)
T ss_dssp HHHHHHGGGCCEEEESCCEEEEEEET--TEEEEEETTS-----CEEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEES
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEECC--CEEEEEECCC-----CEEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEE
Confidence 88888888899988999999998875 4677877655 579999999999994 7777888876655433332
Q ss_pred CCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhh
Q 035902 159 SKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKF 238 (381)
Q Consensus 159 ~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (381)
. +.+...+.+++++|||+|.+|+|+|..|.+.+.+|+++.|++ .+.+.. +..
T Consensus 143 ~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~-~~~~~~--~~~------------------------ 194 (335)
T 2zbw_A 143 A-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRP-QFRAHE--ASV------------------------ 194 (335)
T ss_dssp S-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCCSCH--HHH------------------------
T ss_pred e-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCC-ccCccH--HHH------------------------
Confidence 2 223334468999999999999999999999999999999988 443321 111
Q ss_pred cCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eEEEc---CC--cEeeccEEE
Q 035902 239 GNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EVEFE---NG--KIEEFEAII 307 (381)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v~~~---~g--~~~~~D~vi 307 (381)
..+.+.+++.+|+++.+ +.++..+ .+.++ +| +++++|.||
T Consensus 195 -----------------------------~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi 245 (335)
T 2zbw_A 195 -----------------------------KELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVL 245 (335)
T ss_dssp -----------------------------HHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred -----------------------------HHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEE
Confidence 11234456678888887 7777654 57776 67 579999999
Q ss_pred EecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc---c---CccHHHHHHHHHhhhccccC
Q 035902 308 FATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL---H---GISIDAKNIANDINLALTDH 379 (381)
Q Consensus 308 ~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~---~---~a~~~a~~~a~~i~~~l~~~ 379 (381)
+|+|++|+++ ++. . .++-..+|++.+| +..+++.||||++|||...+ . .|..||..+|++|.+.+...
T Consensus 246 ~a~G~~p~~~-~l~-~-~~~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 319 (335)
T 2zbw_A 246 ILAGYITKLG-PLA-N-WGLALEKNKIKVD-TTMATSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANPA 319 (335)
T ss_dssp ECCCEEEECG-GGG-G-SCCCEETTEEECC-TTCBCSSTTEEECSTTEECTTCCCCHHHHHHHHHHHHHHHHHHHCTT
T ss_pred EeecCCCCch-Hhh-h-cceeccCCeeeeC-CCCCCCCCCEEEeccccccCcchhhhhhhHHHHHHHHHHHHHHhhhh
Confidence 9999999985 343 3 5552237889998 46678999999999998532 1 78899999999999988654
No 18
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=100.00 E-value=1.7e-37 Score=279.31 Aligned_cols=293 Identities=17% Similarity=0.207 Sum_probs=222.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEE-EecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNII-LEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~l-ie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
.+||+|||||++|+++|..|++.|.+|+| +|+ +.+||.|..... +..++ .++...+..++..
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~----------~~~~~------~~~~~~~~~~~~~ 66 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE----------IENYP------GVAQVMDGISFMA 66 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC----------BCCST------TCCSCBCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece----------eccCC------CCCCCCCHHHHHH
Confidence 48999999999999999999999999999 999 567776643210 00111 1123456789999
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCC
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
++.+.+++++++++++ +|.++ .++..+.|.+.+..+ . .+.||+||+|||+.|..|.++|.+.+.+..++....
T Consensus 67 ~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~----~-~~~~d~lvlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 139 (315)
T 3r9u_A 67 PWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGG----K-TELAKAVIVCTGSAPKKAGFKGEDEFFGKGVSTCAT 139 (315)
T ss_dssp HHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTS----C-EEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHH
T ss_pred HHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecC----C-EEEeCEEEEeeCCCCCCCCCCChhhcCCCeEEeeec
Confidence 9999999999998887 78888 554225566544433 2 799999999999999999999988776666666655
Q ss_pred CCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCc
Q 035902 162 ENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNL 241 (381)
Q Consensus 162 ~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 241 (381)
.......+++++|+|+|.+|+|+|..|.+.+.+|+++.|.+ .+... ..
T Consensus 140 ~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~-~~~~~--~~----------------------------- 187 (315)
T 3r9u_A 140 CDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRD-EFRAA--PS----------------------------- 187 (315)
T ss_dssp HHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSS-SCBSC--HH-----------------------------
T ss_pred ccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCC-CCCCC--HH-----------------------------
Confidence 54455578999999999999999999999999999999887 32110 00
Q ss_pred cccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC-----eEEEc--CCc--EeeccEEEEec
Q 035902 242 FKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN-----EVEFE--NGK--IEEFEAIIFAT 310 (381)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~-----~v~~~--~g~--~~~~D~vi~a~ 310 (381)
...+.+++.+|+++.+ +.++..+ ++.+. +|+ ++++|.+|+|+
T Consensus 188 ---------------------------~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~ 240 (315)
T 3r9u_A 188 ---------------------------TVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFV 240 (315)
T ss_dssp ---------------------------HHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECS
T ss_pred ---------------------------HHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEE
Confidence 0122335678998877 7777654 26666 775 79999999999
Q ss_pred CCCCCcchhccccCCc-c-cccCCCCCCCCCCCCCCCCcEEEEeccccc-cc---CccHHHHHHHHHhhhccccC
Q 035902 311 GYKSTVRNWLKRADKD-F-FDEYGMPKRNCPNHWKGENGLYCAGFSRTG-LH---GISIDAKNIANDINLALTDH 379 (381)
Q Consensus 311 G~~p~~~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~-~~---~a~~~a~~~a~~i~~~l~~~ 379 (381)
|++|+...+...+..+ + ++++|++.+| +..+++.||||++|||++. +. .|+.||+.+|.+|...|++.
T Consensus 241 G~~p~~~~~~~~~~~g~l~~~~~g~i~vd-~~~~t~~~~v~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 314 (315)
T 3r9u_A 241 GLNVRNEILKQDDSKFLCNMEEGGQVSVD-LKMQTSVAGLFAAGDLRKDAPKQVICAAGDGAVAALSAMAYIESL 314 (315)
T ss_dssp CEEECCGGGBCTTSCBSSCBCTTSCBCCC-TTCBCSSTTEEECGGGBTTCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCchhhhcccccceeeecCCCcEEeC-CCcccCCCCEEEeecccCCchhhhhhHHhhHHHHHHHHHHHHHhc
Confidence 9999985332102233 5 6788999999 4677899999999999753 22 89999999999999988754
No 19
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=100.00 E-value=4.9e-37 Score=275.70 Aligned_cols=290 Identities=19% Similarity=0.198 Sum_probs=218.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
++||+|||||++|+++|..|++.|.+|+|||+ ..||.|.... ..+.+. . ..+....++.++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~-------------~~~~~~---~-~~~~~~~~~~~~ 61 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTV-------------DIENYI---S-VPKTEGQKLAGA 61 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCC-------------EECCBT---T-BSSEEHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccc-------------cccccc---C-cCCCCHHHHHHH
Confidence 37999999999999999999999999999986 3566664310 001110 0 112356788899
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCC-CCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDEN-AKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
+.+.+++++++++.+++|..++.+.. .+.|.+.+.++ ..+.||+||+|||+.|..|.+||.+.+.+..++.+..
T Consensus 62 ~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g-----~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~ 136 (310)
T 1fl2_A 62 LKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASG-----AVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCPH 136 (310)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTS-----CEEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHH
T ss_pred HHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCC-----CEEEeCEEEECcCCCcCCCCCCChhhcccceeEEecc
Confidence 99999989999999999999986532 23677887765 5799999999999998888899887665444554433
Q ss_pred CCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCc
Q 035902 162 ENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNL 241 (381)
Q Consensus 162 ~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 241 (381)
.......+++++|||+|.+|+|+|..|++.+.+|+++.|.+. +. .+
T Consensus 137 ~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~-~~--~~------------------------------- 182 (310)
T 1fl2_A 137 CDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE-MK--AD------------------------------- 182 (310)
T ss_dssp HHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS-CC--SC-------------------------------
T ss_pred CcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc-cC--cc-------------------------------
Confidence 323334689999999999999999999999999999998872 21 00
Q ss_pred cccCCCCCCCCCcccccccCCCccccchhhhhhcC-CCeEEccC--cceEeCC-----eEEEcC---Cc--EeeccEEEE
Q 035902 242 FKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRK-GEIQVFPS--ITSINRN-----EVEFEN---GK--IEEFEAIIF 308 (381)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~v~~~-----~v~~~~---g~--~~~~D~vi~ 308 (381)
..+.+.+++ .+++++.+ ++++..+ ++.+.+ |+ ++++|.|++
T Consensus 183 --------------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 236 (310)
T 1fl2_A 183 --------------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFV 236 (310)
T ss_dssp --------------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred --------------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEE
Confidence 011233444 58888887 7777654 466654 53 689999999
Q ss_pred ecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEeccccccc----CccHHHHHHHHHhhhccccCC
Q 035902 309 ATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH----GISIDAKNIANDINLALTDHQ 380 (381)
Q Consensus 309 a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~----~a~~~a~~~a~~i~~~l~~~~ 380 (381)
|+|++|+++ ++. . .-.++++|++.+| +.++++.||||++|||.+.+. .|+.||+.+|.+|...|....
T Consensus 237 a~G~~p~~~-~l~-~-~l~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 308 (310)
T 1fl2_A 237 QIGLLPNTN-WLE-G-AVERNRMGEIIID-AKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTK 308 (310)
T ss_dssp CSCEEESCG-GGT-T-TSCBCTTSCBCCC-TTCBCSSTTEEECSTTBSCSSCCHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred eeCCccCch-HHh-c-cccccCCCcEEcC-CCCccCCCCEEEeecccCCcchhhhhhHhhHHHHHHHHHHHHHHhc
Confidence 999999985 444 3 2226778999999 456789999999999988652 789999999999999886653
No 20
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=100.00 E-value=6.8e-37 Score=275.90 Aligned_cols=286 Identities=21% Similarity=0.275 Sum_probs=212.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
++||+|||||++|+++|..|++.|.+|+|||+. ..||.|..... ...++.+ ......++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~-------~~~~~~~~~~~ 77 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAPL----------VENYLGF-------KSIVGSELAKL 77 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCSC----------BCCBTTB-------SSBCHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccch----------hhhcCCC-------cccCHHHHHHH
Confidence 489999999999999999999999999999995 56665432100 0011111 12456678888
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKYE 162 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (381)
+.+.+++++++++. .++.+++.++ +.|.|.+ ++ ..+.||+||+|+|+.|..|.++|.+.+.+..++.....
T Consensus 78 ~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~~-~~-----~~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~~~~~ 148 (319)
T 3cty_A 78 FADHAANYAKIREG-VEVRSIKKTQ--GGFDIET-ND-----DTYHAKYVIITTGTTHKHLGVKGESEYFGKGTSYCSTC 148 (319)
T ss_dssp HHHHHHTTSEEEET-CCEEEEEEET--TEEEEEE-SS-----SEEEEEEEEECCCEEECCCCCBTTTTTBTTTEESCHHH
T ss_pred HHHHHHHcCCEEEE-eeEEEEEEeC--CEEEEEE-CC-----CEEEeCEEEECCCCCcccCCCCChHHhCCceEEEEEec
Confidence 88888888888777 6899998765 5666766 33 46899999999999998888888765543334433222
Q ss_pred CCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCcc
Q 035902 163 NGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLF 242 (381)
Q Consensus 163 ~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 242 (381)
+.....+++++|||+|.+|+|+|..|.+.+.+|+++.|.+ .+.+.
T Consensus 149 ~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~-~~~~~---------------------------------- 193 (319)
T 3cty_A 149 DGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMP-KYMCE---------------------------------- 193 (319)
T ss_dssp HGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSS-SCCSC----------------------------------
T ss_pred chhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCC-ccCCC----------------------------------
Confidence 2233467999999999999999999999999999999887 22110
Q ss_pred ccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC-----eEEEc---CCc--EeeccEEEEec
Q 035902 243 KYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN-----EVEFE---NGK--IEEFEAIIFAT 310 (381)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~-----~v~~~---~g~--~~~~D~vi~a~ 310 (381)
..+.+.+++.+++++.+ ++++..+ ++.+. +|+ ++++|.||+|+
T Consensus 194 -------------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~ 248 (319)
T 3cty_A 194 -------------------------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYV 248 (319)
T ss_dssp -------------------------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECC
T ss_pred -------------------------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEee
Confidence 01123334567777776 7777643 36665 565 68999999999
Q ss_pred CCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccccc-c---CccHHHHHHHHHhhhccccC
Q 035902 311 GYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-H---GISIDAKNIANDINLALTDH 379 (381)
Q Consensus 311 G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-~---~a~~~a~~~a~~i~~~l~~~ 379 (381)
|++|+++ ++. . .++ ++++|++.+| +.++++.||||++|||++.+ . .|..||+.+|.+|...|.+.
T Consensus 249 G~~p~~~-~l~-~-~gl~~~~~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 318 (319)
T 3cty_A 249 GLIPQTS-FLK-D-SGVKLDERGYIVVD-SRQRTSVPGVYAAGDVTSGNFAQIASAVGDGCKAALSLYSDSISK 318 (319)
T ss_dssp CEEECCG-GGT-T-SCCCBCTTSCBCCC-TTCBCSSTTEEECSTTBTTCCCCHHHHHHHHHHHHHHHHHHHTC-
T ss_pred CCccChH-HHh-h-ccccccCCccEeCC-CCCccCCCCEEEeecccCcchhhHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999985 343 3 555 6788999999 45778999999999998763 2 79999999999999988754
No 21
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=100.00 E-value=5.3e-37 Score=278.30 Aligned_cols=288 Identities=16% Similarity=0.221 Sum_probs=214.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEec----CCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILER----EDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRIS 78 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (381)
++||+|||||++|+++|+.|++.|.+|+|||+ ....++.|.... ....++. ++......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~----------~~~~~~~------~~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT----------DVENFPG------FPEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS----------EECCSTT------CTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc----------ccccCCC------CccCCCHHH
Confidence 47999999999999999999999999999998 444555433210 0001111 122234678
Q ss_pred HHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCC----CCcc
Q 035902 79 FINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGS----FEGE 154 (381)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~----~~~~ 154 (381)
+.+++.+.+++.+++++.++ |.+++... +.|.|.+ ++ ..++||+||+|||++|..|.+||.+. +.+.
T Consensus 72 ~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~~~v~~-~~-----~~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~ 142 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTIFTET-VTKVDFSS--KPFKLFT-DS-----KAILADAVILAIGAVAKRLSFVGSGEVLGGFWNR 142 (333)
T ss_dssp HHHHHHHHHHHTTCEEECCC-CCEEECSS--SSEEEEC-SS-----EEEEEEEEEECCCEEECCCCCBTCSSSSSCCBTT
T ss_pred HHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CEEEEEE-CC-----cEEEcCEEEECCCCCcCCCCCCCccccccccccC
Confidence 88889888888899988876 88887754 5677776 44 67999999999999998888888765 4333
Q ss_pred eeecCCCCCCCC--CCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHH
Q 035902 155 YMHSSKYENGGK--FIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVM 232 (381)
Q Consensus 155 ~~~~~~~~~~~~--~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~ 232 (381)
.++......... ..+++++|||+|.+|+|+|..|.+.+.+|+++.|++ .+.+.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~-~~~~~------------------------ 197 (333)
T 1vdc_A 143 GISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRD-AFRAS------------------------ 197 (333)
T ss_dssp TEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSS-SCCSC------------------------
T ss_pred cEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCC-cCCcc------------------------
Confidence 444433222222 468999999999999999999999999999999987 32110
Q ss_pred HhhhhhcCccccCCCCCCCCCcccccccCCCccccchhh-hhhcCCCeEEccC--cceEeCCe-------EEEc---CC-
Q 035902 233 LSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAM-DKIRKGEIQVFPS--ITSINRNE-------VEFE---NG- 298 (381)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~--v~~v~~~~-------v~~~---~g- 298 (381)
..+. +.+++.+|+++.+ +.++..+. +.+. +|
T Consensus 198 -----------------------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~ 242 (333)
T 1vdc_A 198 -----------------------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGD 242 (333)
T ss_dssp -----------------------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCC
T ss_pred -----------------------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCc
Confidence 0011 2335678998877 77876542 6665 35
Q ss_pred -cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc----CccHHHHHHHHHh
Q 035902 299 -KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH----GISIDAKNIANDI 372 (381)
Q Consensus 299 -~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~----~a~~~a~~~a~~i 372 (381)
+++++|.||+|+|++|+.+ ++. .++ ++++|++.+|....+++.||||++|||.+.+. .|..+|+.+|.+|
T Consensus 243 ~~~i~~D~vi~a~G~~p~~~-~~~---~~l~~~~~G~i~vd~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i 318 (333)
T 1vdc_A 243 VSDLKVSGLFFAIGHEPATK-FLD---GGVELDSDGYVVTKPGTTQTSVPGVFAAGDVQDKKYRQAITAAGTGCMAALDA 318 (333)
T ss_dssp EEEEECSEEEECSCEEESCG-GGT---TSSCBCTTSCBCCCTTSCBCSSTTEEECGGGGCSSCCCHHHHHHHHHHHHHHH
T ss_pred eEEEecCEEEEEeCCccchH-Hhh---ccccccCCCCEEechhhcccCCCCEEEeeeccCCCchhHHHHHHhHHHHHHHH
Confidence 5789999999999999985 333 344 67789999984345789999999999987632 7899999999999
Q ss_pred hhccccC
Q 035902 373 NLALTDH 379 (381)
Q Consensus 373 ~~~l~~~ 379 (381)
...|.+.
T Consensus 319 ~~~l~~~ 325 (333)
T 1vdc_A 319 EHYLQEI 325 (333)
T ss_dssp HHHHHHC
T ss_pred HHHHHhc
Confidence 9988653
No 22
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=3e-36 Score=277.25 Aligned_cols=310 Identities=20% Similarity=0.268 Sum_probs=216.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCCCCCCCcCCCCCCCeeeecC---CcccccCCCCC--CCC-----
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSV-PNIILEREDCSASLWKKRAYDRMKLHLA---KQFCELPHMPF--PSR----- 69 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~--~~~----- 69 (381)
|+++||+|||||++|+++|..|++.|. +|+|||++. +|+.|...... .....+ ...+++..+.. +..
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 79 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAFT 79 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHHH
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccc-ccccCcchhcccCCchhhhhcccccccccc
Confidence 777999999999999999999999999 999999998 88876532111 111011 11111111110 000
Q ss_pred -CCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCC
Q 035902 70 -TPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGL 148 (381)
Q Consensus 70 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~ 148 (381)
...++.+.++.+++.+++++++++++++++|++++.++ +.|.|.+.++ .+.||+||+|||+.+. |.+|+
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~g------~~~~d~vVlAtG~~~~-p~ip~- 149 (369)
T 3d1c_A 80 FNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADD--AYYTIATTTE------TYHADYIFVATGDYNF-PKKPF- 149 (369)
T ss_dssp HCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESSC------CEEEEEEEECCCSTTS-BCCCS-
T ss_pred ccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC--CeEEEEeCCC------EEEeCEEEECCCCCCc-cCCCC-
Confidence 02245667888999999999999999999999998865 4677876543 4899999999999865 55665
Q ss_pred CCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech-hhHHHHHHHHhhCcHHHHH
Q 035902 149 GSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR-EIVFAGMLLLKFLPCKLVD 227 (381)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~-~~~~~~~~~~~~l~~~~~~ 227 (381)
+..+++..+.....+.+++++|||+|.+|+|+|..|.+.|.+|+++.|++ .+++. .+.+. .++
T Consensus 150 ----~~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~-~~~~~~~d~~~------~~~----- 213 (369)
T 3d1c_A 150 ----KYGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTT-GLNDPDADPSV------RLS----- 213 (369)
T ss_dssp ----SSCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC-----------CTT------SCC-----
T ss_pred ----CceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCC-CCCCCCCCCCc------cCC-----
Confidence 23567766665555677899999999999999999999999999999988 44321 11100 001
Q ss_pred HHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCC-eEEccC--cceE--eCC--eEEEcCCcE
Q 035902 228 FIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGE-IQVFPS--ITSI--NRN--EVEFENGKI 300 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~--v~~v--~~~--~v~~~~g~~ 300 (381)
+.....+.+.+++.+ ++++.+ |.++ +++ .+.+.+|+.
T Consensus 214 ------------------------------------~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~ 257 (369)
T 3d1c_A 214 ------------------------------------PYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQS 257 (369)
T ss_dssp ------------------------------------HHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCC
T ss_pred ------------------------------------HHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeE
Confidence 011122344556675 999887 8888 444 467788876
Q ss_pred ee-ccEEEEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEeccccccc-------CccHHHHHHHHHh
Q 035902 301 EE-FEAIIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH-------GISIDAKNIANDI 372 (381)
Q Consensus 301 ~~-~D~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~-------~a~~~a~~~a~~i 372 (381)
+. +|.+|+|+|++|+++.+.. .++-+++|++.++.....++.||||++||++.... .+..||+.+|++|
T Consensus 258 ~~~~d~vi~a~G~~~~~~~~~~---~~~~~~~g~i~v~~~~~~t~~~~v~a~GD~~~~~~~~~~~~~~~~~~a~~~a~~l 334 (369)
T 3d1c_A 258 VHTPHEPILATGFDATKNPIVQ---QLFVTTNQDIKLTTHDESTRYPNIFMIGATVENDNAKLCYIYKFRARFAVLAHLL 334 (369)
T ss_dssp EEESSCCEECCCBCGGGSHHHH---HHSCCTTSCCCBCTTSBBSSSTTEEECSTTCCCSSCCCCSHHHHGGGHHHHHHHH
T ss_pred eccCCceEEeeccCCccchhhh---hhccCCCCCEEechhhcccCCCCeEEeccccccCCeeEEEEehhhHHHHHHHHHH
Confidence 65 6999999999999854433 22336788899984446688999999999976533 4567899999999
Q ss_pred hhccc
Q 035902 373 NLALT 377 (381)
Q Consensus 373 ~~~l~ 377 (381)
.+.+.
T Consensus 335 ~~~~~ 339 (369)
T 3d1c_A 335 TQREG 339 (369)
T ss_dssp HHHTT
T ss_pred hcccC
Confidence 87653
No 23
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=100.00 E-value=3.4e-37 Score=277.97 Aligned_cols=292 Identities=15% Similarity=0.241 Sum_probs=215.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
|+++||+|||||++|+++|..|++.|.+|+|||+. ..|+.|..... ...++. ++......++.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~ 65 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWPG------DPNDLTGPLLM 65 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCSTT------CCSSCBHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCCC------CCCCCCHHHHH
Confidence 34689999999999999999999999999999975 56665432110 001111 12234567888
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCC
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSK 160 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~ 160 (381)
+++.+.+++++++++.++ +..++... +.|.+ +.++ ..+.||+||+|||+.|..|.++|.+.+.+..++...
T Consensus 66 ~~~~~~~~~~~~~~~~~~-v~~i~~~~--~~~~v-~~~~-----~~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~ 136 (320)
T 1trb_A 66 ERMHEHATKFETEIIFDH-INKVDLQN--RPFRL-NGDN-----GEYTCDALIIATGASARYLGLPSEEAFKGRGVSACA 136 (320)
T ss_dssp HHHHHHHHHTTCEEECCC-EEEEECSS--SSEEE-EESS-----CEEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCH
T ss_pred HHHHHHHHHCCCEEEEee-eeEEEecC--CEEEE-EeCC-----CEEEcCEEEECCCCCcCCCCCCChHHhCCceeEecc
Confidence 899888999999988876 88887754 56766 5544 579999999999999888888876544433444433
Q ss_pred CCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcC
Q 035902 161 YENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGN 240 (381)
Q Consensus 161 ~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (381)
..+.....+++++|||+|.+|+|+|..|.+.+.+|+++.|.+ .+.+. ..+
T Consensus 137 ~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~--~~~--------------------------- 186 (320)
T 1trb_A 137 TSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRD-GFRAE--KIL--------------------------- 186 (320)
T ss_dssp HHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSS-SCCCC--HHH---------------------------
T ss_pred cCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-ccccC--HHH---------------------------
Confidence 333333468999999999999999999999999999999987 33211 000
Q ss_pred ccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCe-----EEEcC----C--cEeeccEEE
Q 035902 241 LFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNE-----VEFEN----G--KIEEFEAII 307 (381)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~-----v~~~~----g--~~~~~D~vi 307 (381)
...+.+.+++.+|+++.+ ++++..+. +.+++ | +++++|.||
T Consensus 187 --------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv 240 (320)
T 1trb_A 187 --------------------------IKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLF 240 (320)
T ss_dssp --------------------------HHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEE
T ss_pred --------------------------HHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEE
Confidence 011244456788999887 88886543 77764 4 579999999
Q ss_pred EecCCCCCcchhccccCCcc-cccCCCCCCCCCC----CCCCCCcEEEEeccccccc----CccHHHHHHHHHhhhcccc
Q 035902 308 FATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPN----HWKGENGLYCAGFSRTGLH----GISIDAKNIANDINLALTD 378 (381)
Q Consensus 308 ~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~----~~~~~~~ifa~Gd~~~~~~----~a~~~a~~~a~~i~~~l~~ 378 (381)
+|+|++|+++ ++. .++ ++ +|++.++... ..++.||||++|||.+.+. .|..+|..+|.+|...|.+
T Consensus 241 ~a~G~~p~~~-~~~---~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya~GD~~~~~~~~~~~A~~~g~~aa~~i~~~l~~ 315 (320)
T 1trb_A 241 VAIGHSPNTA-IFE---GQLELE-NGYIKVQSGIHGNATQTSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDG 315 (320)
T ss_dssp ECSCEEESCG-GGT---TTSCEE-TTEECCCCSSSSCTTBCSSTTEEECGGGGCSSSCCHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeCCCCChH-Hhc---cccccc-CceEEECCCcccccccCCCCCEEEcccccCCcchhhhhhhccHHHHHHHHHHHHHh
Confidence 9999999985 333 234 56 8999998321 3688999999999988632 7899999999999999865
Q ss_pred C
Q 035902 379 H 379 (381)
Q Consensus 379 ~ 379 (381)
.
T Consensus 316 ~ 316 (320)
T 1trb_A 316 L 316 (320)
T ss_dssp -
T ss_pred c
Confidence 3
No 24
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=100.00 E-value=1.2e-36 Score=279.00 Aligned_cols=296 Identities=17% Similarity=0.207 Sum_probs=219.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
+.+||+|||||++|+++|+.|++.|.+|+|||+.+.+||.|... ++... .+..+.+ + .....++.+
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~------~~~~~~~------~-~~~~~~~~~ 78 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKH------IYDVAGF------P-EVPAIDLVE 78 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSE------ECCSTTC------S-SEEHHHHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCcc------cccCCCC------C-CCCHHHHHH
Confidence 35899999999999999999999999999999998888866422 11110 0111111 1 124578888
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC---CCCCCCCC-CCCCCcceee
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN---GLIPEVPG-LGSFEGEYMH 157 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~---~~~~~~~g-~~~~~~~~~~ 157 (381)
++.+.++++++.++++++|+.++..+ .+.|.|.+.++ ..+.||+||+|||+. |..+.++| .+.+.+..++
T Consensus 79 ~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~~~~g-----~~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~ 152 (360)
T 3ab1_A 79 SLWAQAERYNPDVVLNETVTKYTKLD-DGTFETRTNTG-----NVYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVY 152 (360)
T ss_dssp HHHHHHHTTCCEEECSCCEEEEEECT-TSCEEEEETTS-----CEEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEE
T ss_pred HHHHHHHHhCCEEEcCCEEEEEEECC-CceEEEEECCC-----cEEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEE
Confidence 88888888899999999999998864 23677887665 579999999999994 66667777 6555543333
Q ss_pred cCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhh
Q 035902 158 SSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMK 237 (381)
Q Consensus 158 ~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 237 (381)
.. +.+...+.+++++|||+|.+|+|+|..|.+.+.+|+++.|++ .+.+... ..
T Consensus 153 ~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~-~~~~~~~------~~------------------- 205 (360)
T 3ab1_A 153 YA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH-EFQGHGK------TA------------------- 205 (360)
T ss_dssp SS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS-SCSSCSH------HH-------------------
T ss_pred Ee-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-CCCCCHH------HH-------------------
Confidence 32 233334568999999999999999999999999999999987 3322210 00
Q ss_pred hcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC-----eEEEc--CC--cEeeccEE
Q 035902 238 FGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN-----EVEFE--NG--KIEEFEAI 306 (381)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~-----~v~~~--~g--~~~~~D~v 306 (381)
..+.+..++.+++++.+ +.++..+ ++.+. +| +++++|.|
T Consensus 206 ------------------------------~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~v 255 (360)
T 3ab1_A 206 ------------------------------HEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRL 255 (360)
T ss_dssp ------------------------------HSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEE
T ss_pred ------------------------------HHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEE
Confidence 11234445678888887 7777653 56664 77 57999999
Q ss_pred EEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccccc---c---CccHHHHHHHHHhhhccccC
Q 035902 307 IFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGL---H---GISIDAKNIANDINLALTDH 379 (381)
Q Consensus 307 i~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~---~---~a~~~a~~~a~~i~~~l~~~ 379 (381)
|+|+|++|+.+ ++. . .++ ++ +|++.+| +..+++.||||++|||...+ . .|..||..+|++|.+.+...
T Consensus 256 i~a~G~~p~~~-~l~-~-~~~~~~-~g~i~vd-~~~~t~~~~vya~GD~~~~~~~~~~~~~A~~~g~~aa~~i~~~l~~~ 330 (360)
T 3ab1_A 256 LILIGFKSNLG-PLA-R-WDLELY-ENALVVD-SHMKTSVDGLYAAGDIAYYPGKLKIIQTGLSEATMAVRHSLSYIKPG 330 (360)
T ss_dssp EECCCBCCSCG-GGG-G-SSCCEE-TTEEECC-TTSBCSSTTEEECSTTEECTTCCCSHHHHHHHHHHHHHHHHHHHSCC
T ss_pred EECCCCCCCHH-HHH-h-hccccc-cCeeeec-CCCcCCCCCEEEecCccCCCCccceeehhHHHHHHHHHHHHhhcCCc
Confidence 99999999985 344 3 555 44 7889998 46678999999999998532 2 78899999999999887653
No 25
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.9e-37 Score=278.15 Aligned_cols=286 Identities=17% Similarity=0.213 Sum_probs=214.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.+||+|||||++|+++|..|++.|.+|+|||+. ..||.|..... ...++.+ +......++.++
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~------~~~~~~~~~~~~ 76 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPGF------RNGITGPELMDE 76 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTTC------TTCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCCC------CCCCCHHHHHHH
Confidence 489999999999999999999999999999976 56665533210 0011111 222456788899
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEE-EEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWII-VAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v-~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
+.+.++++++++++++ +.+++. . +.|.| .+.++ ..+.||+||+|||+.|..|.++|.+.+.+..++....
T Consensus 77 l~~~~~~~~v~~~~~~-v~~i~~-~--~~~~v~~~~~g-----~~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~ 147 (335)
T 2a87_A 77 MREQALRFGADLRMED-VESVSL-H--GPLKSVVTADG-----QTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCAT 147 (335)
T ss_dssp HHHHHHHTTCEEECCC-EEEEEC-S--SSSEEEEETTS-----CEEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHH
T ss_pred HHHHHHHcCCEEEEee-EEEEEe-C--CcEEEEEeCCC-----CEEEeCEEEECCCCCccCCCCCchHhccCCceEEeec
Confidence 9988998999988876 888876 3 45667 66554 5799999999999999888888865544444544333
Q ss_pred CCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCc
Q 035902 162 ENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNL 241 (381)
Q Consensus 162 ~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 241 (381)
.+.....+++++|||+|.+|+|+|..|++.+.+|+++.|++ .+.+.
T Consensus 148 ~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~-~~~~~--------------------------------- 193 (335)
T 2a87_A 148 CDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRD-EFRAS--------------------------------- 193 (335)
T ss_dssp HHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSS-SCSSC---------------------------------
T ss_pred cchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCC-cCCcc---------------------------------
Confidence 22223468999999999999999999999999999999887 22110
Q ss_pred cccCCCCCCCCCcccccccCCCccccchhh-hhhcCCCeEEccC--cceEeCCe----EEEc---CC--cEeeccEEEEe
Q 035902 242 FKYGLERPKKGPFYFKAITGQTPTIDVGAM-DKIRKGEIQVFPS--ITSINRNE----VEFE---NG--KIEEFEAIIFA 309 (381)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~--v~~v~~~~----v~~~---~g--~~~~~D~vi~a 309 (381)
..+. +.+++.+|+++.+ +.++..+. +.++ +| +++++|.||+|
T Consensus 194 --------------------------~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a 247 (335)
T 2a87_A 194 --------------------------KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVA 247 (335)
T ss_dssp --------------------------TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEEC
T ss_pred --------------------------HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEc
Confidence 0012 2335678999887 88887653 7665 35 57999999999
Q ss_pred cCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc----CccHHHHHHHHHhhhcccc
Q 035902 310 TGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH----GISIDAKNIANDINLALTD 378 (381)
Q Consensus 310 ~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~----~a~~~a~~~a~~i~~~l~~ 378 (381)
+|++|+++ ++. .++ ++++|++.+|.....++.||||++|||.+... .|..+|+.+|.+|...|..
T Consensus 248 ~G~~p~~~-~~~---~~l~~~~~G~i~vd~~~~~t~~~~iya~GD~~~~~~~~~~~A~~~g~~aA~~i~~~l~~ 317 (335)
T 2a87_A 248 IGHEPRSG-LVR---EAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAE 317 (335)
T ss_dssp SCEEECCT-TTB---TTBCBCTTSCBCCSTTSSBCSSTTEEECGGGTCCSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccChh-Hhh---cccccCCCccEEeCCCCCccCCCCEEEeeecCCccHHHHHHHHHhHHHHHHHHHHHhhc
Confidence 99999985 333 344 67789999994345789999999999987632 7889999999999988754
No 26
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=7.4e-38 Score=292.99 Aligned_cols=291 Identities=19% Similarity=0.220 Sum_probs=208.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV--PNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
.+|+|||||+||++||..|++.|. +|+|||+++..+.. ....+.. ................
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~--~~~l~~~----------~~~~~~~~~~~~~~~~----- 63 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFA--NCALPYV----------IGEVVEDRRYALAYTP----- 63 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBC--GGGHHHH----------HTTSSCCGGGTBCCCH-----
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCC--cchhHHH----------HcCCccchhhhhhcCH-----
Confidence 379999999999999999999874 79999998754321 0000000 0000000000001111
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCC
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
+++.++.+++++.+++|+.++... +. +....+...+..++.||+||||||+.|..|.++|...+..+.......
T Consensus 64 --~~~~~~~~i~~~~~~~V~~id~~~--~~--~~~~~~~~~~~~~~~yd~lVIATGs~p~~p~i~g~~~~~~~~~~~~~~ 137 (437)
T 4eqs_A 64 --EKFYDRKQITVKTYHEVIAINDER--QT--VSVLNRKTNEQFEESYDKLILSPGASANSLGFESDITFTLRNLEDTDA 137 (437)
T ss_dssp --HHHHHHHCCEEEETEEEEEEETTT--TE--EEEEETTTTEEEEEECSEEEECCCEEECCCCCCCTTEECCSSHHHHHH
T ss_pred --HHHHHhcCCEEEeCCeEEEEEccC--cE--EEEEeccCCceEEEEcCEEEECCCCccccccccCceEEeeccHHHHHH
Confidence 234556799999999999998765 54 555554444557899999999999999988887744321111100000
Q ss_pred CCC--CCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhc
Q 035902 162 ENG--GKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFG 239 (381)
Q Consensus 162 ~~~--~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (381)
... ....+++++|||+|.+|+|+|..++++|.+|+++.|.+ .++|..+.+....+
T Consensus 138 l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ll~~~d~~~~~~~---------------------- 194 (437)
T 4eqs_A 138 IDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD-KINKLMDADMNQPI---------------------- 194 (437)
T ss_dssp HHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS-CCSTTSCGGGGHHH----------------------
T ss_pred HHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec-cccccccchhHHHH----------------------
Confidence 000 01247899999999999999999999999999999998 67776655444433
Q ss_pred CccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCeEEEcCCcEeeccEEEEecCCCCCcc
Q 035902 240 NLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNEVEFENGKIEEFEAIIFATGYKSTVR 317 (381)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~~~ 317 (381)
.+.+++.+|+++.+ |++++++.+.+++|+++++|.+++|+|++||++
T Consensus 195 -------------------------------~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 195 -------------------------------LDELDKREIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp -------------------------------HHHHHHTTCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCEEESCG
T ss_pred -------------------------------HHHhhccceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEeceecCcH
Confidence 34446677888877 899999999999999999999999999999985
Q ss_pred hhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc-------------CccHHHHHHHHHhhhc
Q 035902 318 NWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH-------------GISIDAKNIANDINLA 375 (381)
Q Consensus 318 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~-------------~a~~~a~~~a~~i~~~ 375 (381)
++. . .++ ++++|++.+| +.++|+.|||||+|||+..++ .|..||+.+|+||.+.
T Consensus 244 -~~~-~-~gl~~~~~G~I~vd-~~~~Ts~p~IyA~GDva~~~~~~~~~~~~~~~a~~A~~~g~~~a~ni~g~ 311 (437)
T 4eqs_A 244 -FIE-S-SNIKLDRKGFIPVN-DKFETNVPNIYAIGDIATSHYRHVDLPASVPLAWGAHRAASIVAEQIAGN 311 (437)
T ss_dssp -GGT-T-SSCCCCTTSCEECC-TTCBCSSTTEEECGGGEEEEBSSSSSEECCCSHHHHHHHHHHHHHHHHSC
T ss_pred -HHH-h-hhhhhccCCcEecC-CCccCCCCCEEEEEEccCcccccCCccccchhHHHHHHHHHHHHHHHcCC
Confidence 343 3 666 7889999999 577899999999999976431 6789999999999874
No 27
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=100.00 E-value=2.3e-35 Score=281.93 Aligned_cols=289 Identities=18% Similarity=0.206 Sum_probs=222.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
++||+||||||||+++|..|++.|.+|+|+|+ ..||.|.... ....+... ......++.++
T Consensus 212 ~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~----------~~~~~~~~-------~~~~~~~l~~~ 272 (521)
T 1hyu_A 212 AYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTV----------DIENYISV-------PKTEGQKLAGA 272 (521)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCS----------CBCCBTTB-------SSBCHHHHHHH
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccc----------cccccCCC-------CCCCHHHHHHH
Confidence 58999999999999999999999999999986 4666664321 00001111 12456788899
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCC-CCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDEN-AKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
+.+.+++++++++.+++|.+++.+.. .+.|.|.+.++ ..++||+||+|||+.|..|.+||.+.+.+..++.+..
T Consensus 273 l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g-----~~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~ 347 (521)
T 1hyu_A 273 LKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASG-----AVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPH 347 (521)
T ss_dssp HHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTS-----CEEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTT
T ss_pred HHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCC-----CEEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeec
Confidence 99999999999999999999986432 24678888765 5799999999999998888899987766555666655
Q ss_pred CCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCc
Q 035902 162 ENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNL 241 (381)
Q Consensus 162 ~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 241 (381)
.+...+.+++++|||+|.+|+|+|..|+..+.+|+++.|.+ .+.+.
T Consensus 348 ~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~-~l~~~--------------------------------- 393 (521)
T 1hyu_A 348 CDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAP-EMKAD--------------------------------- 393 (521)
T ss_dssp CCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSS-SCCSC---------------------------------
T ss_pred CchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCc-ccCcC---------------------------------
Confidence 54445578999999999999999999999999999999887 33211
Q ss_pred cccCCCCCCCCCcccccccCCCccccchhhhhhcC-CCeEEccC--cceEeCC-----eEEEcC---Cc--EeeccEEEE
Q 035902 242 FKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRK-GEIQVFPS--ITSINRN-----EVEFEN---GK--IEEFEAIIF 308 (381)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~v~~~-----~v~~~~---g~--~~~~D~vi~ 308 (381)
..+.+.+++ .+|+++.+ ++++.++ ++.+.+ |+ ++++|.|++
T Consensus 394 --------------------------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~ 447 (521)
T 1hyu_A 394 --------------------------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFV 447 (521)
T ss_dssp --------------------------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEE
T ss_pred --------------------------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEE
Confidence 011333444 58899888 8888753 356653 53 689999999
Q ss_pred ecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEeccccccc----CccHHHHHHHHHhhhccccC
Q 035902 309 ATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH----GISIDAKNIANDINLALTDH 379 (381)
Q Consensus 309 a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~----~a~~~a~~~a~~i~~~l~~~ 379 (381)
++|++|+++ ++. . .-.++++|++.+| +..+++.|||||+|||.+.+. .|+.+|..+|.+|..+|.+.
T Consensus 448 a~G~~pn~~-~l~-~-~l~~~~~G~I~Vd-~~~~ts~p~VfA~GD~~~~~~~~~~~A~~~g~~aa~~i~~~L~~~ 518 (521)
T 1hyu_A 448 QIGLLPNTH-WLE-G-ALERNRMGEIIID-AKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRT 518 (521)
T ss_dssp CCCEEESCG-GGT-T-TSCBCTTSCBCCC-TTCBCSSTTEEECSTTBCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCch-HHh-h-hhccCCCCcEEeC-CCCCCCCCCEEEeecccCCCcceeeehHHhHHHHHHHHHHHHHhh
Confidence 999999984 555 3 2226788999999 567789999999999988652 89999999999999988654
No 28
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=6.8e-36 Score=283.27 Aligned_cols=299 Identities=13% Similarity=0.170 Sum_probs=197.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHH
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRIS 78 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (381)
|+.+||+|||||++|+++|..|++. |.+|+|||+++.++ |.....+... . . ...... ...+...+
T Consensus 1 M~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~~~---~----g--~~~~~~--~~~~~~~~ 67 (472)
T 3iwa_A 1 MSLKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPYYV---S----G--EVSNIE--SLQATPYN 67 (472)
T ss_dssp ---CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccchhh---c----C--CCCchH--Hhccccch
Confidence 7678999999999999999999998 88999999998654 1110000000 0 0 000000 00011122
Q ss_pred HHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeec
Q 035902 79 FINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHS 158 (381)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~ 158 (381)
+..+.+.+.+++++.++++++|++++.+. +. +.+.+...++...+.||+||+|||+.|..|+++|.+. .+ +++.
T Consensus 68 ~~~~~~~~~~~~gi~~~~~~~V~~id~~~--~~--v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~-~~-v~~~ 141 (472)
T 3iwa_A 68 VVRDPEFFRINKDVEALVETRAHAIDRAA--HT--VEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDL-AG-VTPV 141 (472)
T ss_dssp -------------CEEECSEEEEEEETTT--TE--EEEEETTTCCEEEEECSEEEECCCEEECCCSCTTTTS-BT-EEEC
T ss_pred hccCHHHHhhhcCcEEEECCEEEEEECCC--CE--EEEeecCCCCEEEEECCEEEEeCCCCcCCCCCCCCCC-CC-EEEe
Confidence 45566666667889999999999998765 55 4444321223358999999999999999999998762 22 3333
Q ss_pred CCCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHhhC-CCeeEEEEecCcceec-hhhHHHHHHHHhhCcHHHHHHH
Q 035902 159 SKYENG-------GKFIGKNVLVVGCGNSGMEIAYDLSSC-GACTSIVVRGPVHVLT-REIVFAGMLLLKFLPCKLVDFI 229 (381)
Q Consensus 159 ~~~~~~-------~~~~~~~v~viG~G~~~~e~a~~l~~~-g~~v~~i~r~~~~~~p-~~~~~~~~~~~~~l~~~~~~~~ 229 (381)
....+. ....+++++|||+|.+|+|+|..+.+. |.+|+++.|.+ .++| ..+.++...+
T Consensus 142 ~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~l------------ 208 (472)
T 3iwa_A 142 TNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD-QIMPGFTSKSLSQML------------ 208 (472)
T ss_dssp CSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS-SSSTTTSCHHHHHHH------------
T ss_pred CCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC-cccccccCHHHHHHH------------
Confidence 221111 112479999999999999999999999 99999999998 6666 4443333332
Q ss_pred HHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC-C-e--EEEcCCcEeec
Q 035902 230 VVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR-N-E--VEFENGKIEEF 303 (381)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~-~-~--v~~~~g~~~~~ 303 (381)
.+.+++.+++++.+ |++++. + . +.+.+|+++++
T Consensus 209 -----------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~a 247 (472)
T 3iwa_A 209 -----------------------------------------RHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDA 247 (472)
T ss_dssp -----------------------------------------HHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEEC
T ss_pred -----------------------------------------HHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEc
Confidence 34456678888887 888765 2 2 67789999999
Q ss_pred cEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccc-------cc------cCccHHHHHHH
Q 035902 304 EAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRT-------GL------HGISIDAKNIA 369 (381)
Q Consensus 304 D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~-------~~------~~a~~~a~~~a 369 (381)
|.||+|+|++|+++ ++. . .++ ++++|++.+| +.++++.||||++|||+. .+ ..|..||+.+|
T Consensus 248 D~Vv~a~G~~p~~~-l~~-~-~gl~~~~~g~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa 323 (472)
T 3iwa_A 248 DLVILAAGVSPNTQ-LAR-D-AGLELDPRGAIIVD-TRMRTSDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIG 323 (472)
T ss_dssp SEEEECSCEEECCH-HHH-H-HTCCBCTTCCEECC-TTCBCSSTTEEECGGGEEEEBTTTSSEECCCCTTHHHHHHHHHH
T ss_pred CEEEECCCCCcCHH-HHH-h-CCccCCCCCCEEEC-CCcccCCCCEEEeccceecccccCCceeecchHHHHHHHHHHHH
Confidence 99999999999986 343 3 566 7788999999 567789999999999973 21 26889999999
Q ss_pred HHhhhcc
Q 035902 370 NDINLAL 376 (381)
Q Consensus 370 ~~i~~~l 376 (381)
++|.+.-
T Consensus 324 ~~i~g~~ 330 (472)
T 3iwa_A 324 TNLADGD 330 (472)
T ss_dssp HHHTTCC
T ss_pred HHhcCCC
Confidence 9998743
No 29
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=6.7e-36 Score=290.77 Aligned_cols=291 Identities=16% Similarity=0.239 Sum_probs=216.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCC-CCHH
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTF-VPRI 77 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 77 (381)
|+.+||+|||||+||++||..|++. |.+|+|||+++.++ |... .++... . ... ....
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~--~~~~--------------~lp~~~---~-g~~~~~~~ 93 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS--FANC--------------GLPYYI---G-GVITERQK 93 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS--BCGG--------------GHHHHH---T-TSSCCGGG
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc--ccCC--------------CCchhh---c-CcCCChHH
Confidence 3458999999999999999999998 88999999998654 1110 000000 0 001 1122
Q ss_pred HHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceee
Q 035902 78 SFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMH 157 (381)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~ 157 (381)
.+..+++.+.+++++.++++++|++++.+. +.+ .+.+...++...+.||+||+|||+.|..|+++|.+...+ +++
T Consensus 94 ~~~~~~~~~~~~~gi~v~~~~~V~~id~~~--~~v--~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~-v~~ 168 (588)
T 3ics_A 94 LLVQTVERMSKRFNLDIRVLSEVVKINKEE--KTI--TIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEEAKA-LFT 168 (588)
T ss_dssp GBSSCHHHHHHHTTCEEECSEEEEEEETTT--TEE--EEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTTCTT-EEE
T ss_pred hhccCHHHHHHhcCcEEEECCEEEEEECCC--CEE--EEeecCCCCEEEEeCCEEEECCCCCCCCCCCCCcccCCC-eEE
Confidence 345566777788899999999999998765 554 443322223357999999999999999999999843332 444
Q ss_pred cCCCCCCC-------CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHH
Q 035902 158 SSKYENGG-------KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIV 230 (381)
Q Consensus 158 ~~~~~~~~-------~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~ 230 (381)
.....+.. ...+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .++|..+.++...+
T Consensus 169 ~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l------------- 234 (588)
T 3ics_A 169 LRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN-QVMPPIDYEMAAYV------------- 234 (588)
T ss_dssp CSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHHHHHH-------------
T ss_pred eCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-cccccCCHHHHHHH-------------
Confidence 43322211 1358999999999999999999999999999999988 67776555444333
Q ss_pred HHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC--CeEEEcCCcEeeccEE
Q 035902 231 VMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR--NEVEFENGKIEEFEAI 306 (381)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~--~~v~~~~g~~~~~D~v 306 (381)
.+.+++.+++++.+ |++++. +++.+++|+++++|.|
T Consensus 235 ----------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~V 274 (588)
T 3ics_A 235 ----------------------------------------HEHMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDML 274 (588)
T ss_dssp ----------------------------------------HHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEE
T ss_pred ----------------------------------------HHHHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEE
Confidence 33446678888876 888876 5788999999999999
Q ss_pred EEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccc-------cc------cCccHHHHHHHHHh
Q 035902 307 IFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRT-------GL------HGISIDAKNIANDI 372 (381)
Q Consensus 307 i~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~-------~~------~~a~~~a~~~a~~i 372 (381)
|+|+|++|+++. +. . .++ ++++|++.+| +.++++.|||||+|||+. .+ ..|..||+.+|++|
T Consensus 275 i~a~G~~p~~~~-l~-~-~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i 350 (588)
T 3ics_A 275 ILAIGVQPESSL-AK-G-AGLALGVRGTIKVN-EKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADII 350 (588)
T ss_dssp EECSCEEECCHH-HH-H-TTCCBCGGGCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCCEECCCCHHHHHHHHHHHHHHH
T ss_pred EEccCCCCChHH-HH-h-cCceEcCCCCEEEC-CccccCCCCEEEeeeeeecccccCCcccccccHHHHHHHHHHHHHHh
Confidence 999999999863 43 3 666 7889999999 567789999999999983 21 16889999999999
Q ss_pred hh
Q 035902 373 NL 374 (381)
Q Consensus 373 ~~ 374 (381)
.+
T Consensus 351 ~g 352 (588)
T 3ics_A 351 HG 352 (588)
T ss_dssp TT
T ss_pred cC
Confidence 87
No 30
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=100.00 E-value=4.2e-35 Score=276.20 Aligned_cols=287 Identities=14% Similarity=0.105 Sum_probs=204.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHH
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRIS 78 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (381)
|+ +||+|||||+||+++|..|++. |.+|+|||+++.++.. ..... .+.. .......+
T Consensus 1 M~-~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~--~~~~~--------------~~~~----~~~~~~~~ 59 (452)
T 3oc4_A 1 MS-LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYL--SGGLS--------------AYFN----HTINELHE 59 (452)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSC--CC---------------------------------
T ss_pred CC-CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCccc--Cccch--------------hhhc----CCCCCHHH
Confidence 64 7999999999999999999998 8899999999866521 10000 0000 00001111
Q ss_pred HHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeec
Q 035902 79 FINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHS 158 (381)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~ 158 (381)
+.....+.+++++++++++++|.+++.+. +.+.+.... +...+.||+||+|||+.|..|+++|.+. ..+++.
T Consensus 60 ~~~~~~~~~~~~gi~~~~~~~V~~id~~~--~~v~v~~~~----~~~~~~~d~lviAtG~~p~~p~i~g~~~--~~v~~~ 131 (452)
T 3oc4_A 60 ARYITEEELRRQKIQLLLNREVVAMDVEN--QLIAWTRKE----EQQWYSYDKLILATGASQFSTQIRGSQT--EKLLKY 131 (452)
T ss_dssp -CCCCHHHHHHTTEEEECSCEEEEEETTT--TEEEEEETT----EEEEEECSEEEECCCCCBCCCCCBTTTC--TTEEEG
T ss_pred hhcCCHHHHHHCCCEEEECCEEEEEECCC--CEEEEEecC----ceEEEEcCEEEECCCcccCCCCCCCCCC--CCEEEe
Confidence 11112344566788888999999998765 665554111 2368999999999999999999998764 224444
Q ss_pred CCCCCCCC-----CCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech-hhHHHHHHHHhhCcHHHHHHHHHH
Q 035902 159 SKYENGGK-----FIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR-EIVFAGMLLLKFLPCKLVDFIVVM 232 (381)
Q Consensus 159 ~~~~~~~~-----~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~-~~~~~~~~~~~~l~~~~~~~~~~~ 232 (381)
..+.+... ..+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|. .+.++...+
T Consensus 132 ~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~~~~~~l--------------- 195 (452)
T 3oc4_A 132 KFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE-NLLPKYFDKEMVAEV--------------- 195 (452)
T ss_dssp GGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTCCHHHHHHH---------------
T ss_pred CCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC-ccccccCCHHHHHHH---------------
Confidence 33322211 258999999999999999999999999999999998 66664 344333332
Q ss_pred HhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEe--CCe--EEEcCCcEeeccEE
Q 035902 233 LSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSIN--RNE--VEFENGKIEEFEAI 306 (381)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~--~~~--v~~~~g~~~~~D~v 306 (381)
.+.+++.+++++.+ |+++. +++ +.++++ ++++|.|
T Consensus 196 --------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~V 236 (452)
T 3oc4_A 196 --------------------------------------QKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSG 236 (452)
T ss_dssp --------------------------------------HHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEE
T ss_pred --------------------------------------HHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEE
Confidence 44457788999887 88887 233 556666 8999999
Q ss_pred EEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc-----------c--CccHHHHHHHHHhh
Q 035902 307 IFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-----------H--GISIDAKNIANDIN 373 (381)
Q Consensus 307 i~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-----------~--~a~~~a~~~a~~i~ 373 (381)
|+|+|++|+++ ++. . .--++++|++.+| +.++++.|||||+|||++.. . .|..||+.+|++|.
T Consensus 237 v~A~G~~p~~~-~l~-~-~~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~ 312 (452)
T 3oc4_A 237 IFALNLHPQLA-YLD-K-KIQRNLDQTIAVD-AYLQTSVPNVFAIGDCISVMNEPVAETFYAPLVNNAVRTGLVVANNLE 312 (452)
T ss_dssp EECSCCBCCCS-SCC-T-TSCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEEGGGTEEECCCCHHHHHHHHHHHTTSSS
T ss_pred EECcCCCCChH-HHH-h-hhccCCCCCEEEC-cCccCCCCCEEEEEeeEEeccccCCceeecchHHHHHHHHHHHHHHhc
Confidence 99999999986 344 3 3227789999999 56778999999999998753 1 78999999999998
Q ss_pred hc
Q 035902 374 LA 375 (381)
Q Consensus 374 ~~ 375 (381)
+.
T Consensus 313 g~ 314 (452)
T 3oc4_A 313 EK 314 (452)
T ss_dssp SC
T ss_pred CC
Confidence 74
No 31
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=100.00 E-value=2.8e-35 Score=281.86 Aligned_cols=302 Identities=16% Similarity=0.180 Sum_probs=214.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCee-eecCC---cccccCCCC-CCCCCCCCCCH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRMK-LHLAK---QFCELPHMP-FPSRTPTFVPR 76 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~-~~~~~---~~~~~~~~~-~~~~~~~~~~~ 76 (381)
++||+|||||++|+++|..|++.|.+|+|||++..+||.|... +.+... ..... .......+. ++.....+++.
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 122 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVVGI 122 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhhhH
Confidence 4899999999999999999999999999999998788865421 111000 00000 000001110 11111223346
Q ss_pred HHHHHHHH-------HHH-----HHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 77 ISFINYVD-------NYV-----SQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 77 ~~~~~~~~-------~~~-----~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.++.+++. ..+ ++.+++++++.++..++. +. +.+. + ..+.||+||+|||+.|..|+
T Consensus 123 ~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~----~~--v~~~-g-----~~~~~d~lViATGs~p~~p~ 190 (523)
T 1mo9_A 123 KEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN----HT--VEAA-G-----KVFKAKNLILAVGAGPGTLD 190 (523)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET----TE--EEET-T-----EEEEBSCEEECCCEECCCCC
T ss_pred HHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC----CE--EEEC-C-----EEEEeCEEEECCCCCCCCCC
Confidence 66666654 344 566888775667766652 33 5554 3 67999999999999999999
Q ss_pred CCCCCCCCcceeecCCCC-CCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcH
Q 035902 145 VPGLGSFEGEYMHSSKYE-NGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPC 223 (381)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~-~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~ 223 (381)
++|.+. . .++++.++. ......+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|..+.++...+
T Consensus 191 i~G~~~-~-~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~~~~~~l------ 261 (523)
T 1mo9_A 191 VPGVNA-K-GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLIKDNETRAYV------ 261 (523)
T ss_dssp STTTTS-B-TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTTCCSHHHHHHH------
T ss_pred CCCccc-C-cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-cccccccHHHHHHH------
Confidence 998764 2 245555444 3333334999999999999999999999999999999998 66665544433333
Q ss_pred HHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC--Ce------E
Q 035902 224 KLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR--NE------V 293 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~--~~------v 293 (381)
.+.+++.+++++.+ |+++.. ++ +
T Consensus 262 -----------------------------------------------~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v 294 (523)
T 1mo9_A 262 -----------------------------------------------LDRMKEQGMEIISGSNVTRIEEDANGRVQAVVA 294 (523)
T ss_dssp -----------------------------------------------HHHHHHTTCEEESSCEEEEEEECTTSBEEEEEE
T ss_pred -----------------------------------------------HHHHHhCCcEEEECCEEEEEEEcCCCceEEEEE
Confidence 33446678888877 777764 33 5
Q ss_pred EEcCCc-EeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHH
Q 035902 294 EFENGK-IEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNI 368 (381)
Q Consensus 294 ~~~~g~-~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~ 368 (381)
.+++|+ ++++|.||+|+|++|+++.++. . .++ ++++|++.+| +.++++.|+|||+|||++.+. .|..||+.+
T Consensus 295 ~~~~G~~~i~aD~Vv~A~G~~p~~~~~l~-~-~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~a 371 (523)
T 1mo9_A 295 MTPNGEMRIETDFVFLGLGEQPRSAELAK-I-LGLDLGPKGEVLVN-EYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYA 371 (523)
T ss_dssp EETTEEEEEECSCEEECCCCEECCHHHHH-H-HTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHH
T ss_pred EECCCcEEEEcCEEEECcCCccCCccCHH-H-cCCccCCCCCEEEC-CCCccCCCCEEEEeecCCCcccHHHHHHHHHHH
Confidence 566787 8999999999999999863233 2 566 6778999999 567789999999999998654 899999999
Q ss_pred HHHhhhc
Q 035902 369 ANDINLA 375 (381)
Q Consensus 369 a~~i~~~ 375 (381)
|++|.+.
T Consensus 372 a~~i~g~ 378 (523)
T 1mo9_A 372 ARNVMGE 378 (523)
T ss_dssp HHHHTTC
T ss_pred HHHHcCC
Confidence 9999873
No 32
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.5e-35 Score=282.26 Aligned_cols=310 Identities=17% Similarity=0.168 Sum_probs=204.5
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCeeeecCC----------cccccCCCCCCCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRMKLHLAK----------QFCELPHMPFPSR 69 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~~~~~----------~~~~~~~~~~~~~ 69 (381)
|+++||+|||||++|+++|..|++.|.+|+|||+++.+||.|... +++...+.... ..+++.......+
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 102 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLN 102 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEEC
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccC
Confidence 456999999999999999999999999999999998899865431 11111000000 0000100000000
Q ss_pred CCCCCC-HH----HHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 70 TPTFVP-RI----SFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 70 ~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
+..... .. .+...+...+++.+++++.+... . .+ .+.+.|...++ +...+.||+||+|||+.| +.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~-~--~~--~~~~~v~~~~g---~~~~~~~d~lViATGs~p--~~ 172 (491)
T 3urh_A 103 LQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGK-V--LG--QGKVSVTNEKG---EEQVLEAKNVVIATGSDV--AG 172 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-E--CS--SSEEEEECTTS---CEEEEECSEEEECCCEEC--CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-E--ec--CCEEEEEeCCC---ceEEEEeCEEEEccCCCC--CC
Confidence 010000 11 12223344455667776555422 1 22 24555554332 346799999999999986 35
Q ss_pred CCCCCC-CCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcH
Q 035902 145 VPGLGS-FEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPC 223 (381)
Q Consensus 145 ~~g~~~-~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~ 223 (381)
+||++. +.+..++...........+++++|||+|.+|+|+|..+++.|.+|+++.+.+ .+++..+.++...+
T Consensus 173 ipg~~~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~~~~l------ 245 (491)
T 3urh_A 173 IPGVEVAFDEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-TILGGMDGEVAKQL------ 245 (491)
T ss_dssp BTTBCCCCCSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSSSSCHHHHHHH------
T ss_pred CCCcccccCCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc-cccccCCHHHHHHH------
Confidence 667652 2333333333333334468999999999999999999999999999999998 67676555444333
Q ss_pred HHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eEEEcC
Q 035902 224 KLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EVEFEN 297 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v~~~~ 297 (381)
.+.+++.+|+++.+ ++++..+ .+.+++
T Consensus 246 -----------------------------------------------~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~ 278 (491)
T 3urh_A 246 -----------------------------------------------QRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEP 278 (491)
T ss_dssp -----------------------------------------------HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEE
T ss_pred -----------------------------------------------HHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEe
Confidence 33446678888887 7777642 255553
Q ss_pred ---C--cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHH
Q 035902 298 ---G--KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNI 368 (381)
Q Consensus 298 ---g--~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~ 368 (381)
| +++++|.||+|+|++|+++.+.. +..++ ++++|++.+| +.++++.|||||+|||.+.+. .|..||+.+
T Consensus 279 ~~~g~~~~i~~D~Vi~a~G~~p~~~~l~l-~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~a 356 (491)
T 3urh_A 279 VKGGEATTLDAEVVLIATGRKPSTDGLGL-AKAGVVLDSRGRVEID-RHFQTSIAGVYAIGDVVRGPMLAHKAEDEGVAV 356 (491)
T ss_dssp TTSCCCEEEEESEEEECCCCEECCTTSCH-HHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHH
T ss_pred cCCCceEEEEcCEEEEeeCCccCCCccCc-hhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCccchhHHHHHHHHH
Confidence 4 58999999999999999965412 22566 7789999999 567789999999999997655 899999999
Q ss_pred HHHhhhcc
Q 035902 369 ANDINLAL 376 (381)
Q Consensus 369 a~~i~~~l 376 (381)
|++|.+..
T Consensus 357 a~~i~g~~ 364 (491)
T 3urh_A 357 AEIIAGQA 364 (491)
T ss_dssp HHHHTTSC
T ss_pred HHHHcCCC
Confidence 99998753
No 33
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=100.00 E-value=1e-34 Score=275.73 Aligned_cols=304 Identities=13% Similarity=0.107 Sum_probs=209.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCee-eecC---C--cccccCCCCCCCCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRMK-LHLA---K--QFCELPHMPFPSRTPTFVP 75 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~-~~~~---~--~~~~~~~~~~~~~~~~~~~ 75 (381)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|... +.+... .... . ........++. .....
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~---~~~~~ 82 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP---EPELD 82 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC---CCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC---CCccC
Confidence 5899999999999999999999999999999988888754321 111000 0000 0 00000011110 01112
Q ss_pred HHHH-----------HHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeec-------CCCceEEEEeCEEEEccC
Q 035902 76 RISF-----------INYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNT-------ALDAYEEYVARYLVVATG 137 (381)
Q Consensus 76 ~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~-------~~~~~~~~~~d~vIlAtG 137 (381)
...+ ...+...+++.+++++.++.+. .+. +.+.+...++ ..++...++||+||+|||
T Consensus 83 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~--~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lViAtG 157 (482)
T 1ojt_A 83 IDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDP--HHLEVSLTAGDAYEQAAPTGEKKIVAFKNCIIAAG 157 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EET--TEEEEEEEEEEETTEEEEEEEEEEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccC--CEEEEEecCCcccccccccCcceEEEcCEEEECCC
Confidence 2222 2223455666788887776543 222 4555654433 011225799999999999
Q ss_pred CCCCCCC-CCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHH
Q 035902 138 ENGLIPE-VPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGML 216 (381)
Q Consensus 138 ~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~ 216 (381)
++|..|+ ++ .+. .++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+.++...
T Consensus 158 s~p~~~~~i~-~~~---~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~~~~~~ 231 (482)
T 1ojt_A 158 SRVTKLPFIP-EDP---RIIDSSGALALKE-VPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD-GLMQGADRDLVKV 231 (482)
T ss_dssp EEECCCSSCC-CCT---TEECHHHHTTCCC-CCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCHHHHHH
T ss_pred CCCCCCCCCC-ccC---cEEcHHHHhcccc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-ccccccCHHHHHH
Confidence 9988776 44 221 3555554443333 48999999999999999999999999999999998 6777655544443
Q ss_pred HHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC---
Q 035902 217 LLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN--- 291 (381)
Q Consensus 217 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~--- 291 (381)
+ .+.+++.+|+++.+ +++++.+
T Consensus 232 l-----------------------------------------------------~~~l~~~gV~i~~~~~v~~i~~~~~~ 258 (482)
T 1ojt_A 232 W-----------------------------------------------------QKQNEYRFDNIMVNTKTVAVEPKEDG 258 (482)
T ss_dssp H-----------------------------------------------------HHHHGGGEEEEECSCEEEEEEEETTE
T ss_pred H-----------------------------------------------------HHHHHhcCCEEEECCEEEEEEEcCCe
Confidence 3 33446678888887 7777643
Q ss_pred -eEEEcC----CcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---Ccc
Q 035902 292 -EVEFEN----GKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GIS 362 (381)
Q Consensus 292 -~v~~~~----g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~ 362 (381)
.+.+++ |+++++|.|++|+|++|+++.+.. +..++ ++++|++.+| +.++++.|||||+|||++.+. .|.
T Consensus 259 ~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~~~l~~-~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~l~~~A~ 336 (482)
T 1ojt_A 259 VYVTFEGANAPKEPQRYDAVLVAAGRAPNGKLISA-EKAGVAVTDRGFIEVD-KQMRTNVPHIYAIGDIVGQPMLAHKAV 336 (482)
T ss_dssp EEEEEESSSCCSSCEEESCEEECCCEEECGGGTTG-GGTTCCCCTTSCCCCC-TTSBCSSTTEEECGGGTCSSCCHHHHH
T ss_pred EEEEEeccCCCceEEEcCEEEECcCCCcCCCCCCh-hhcCceeCCCCCEeeC-CCcccCCCCEEEEEcccCCCccHHHHH
Confidence 366666 778999999999999999965422 33666 6778999999 567789999999999988654 899
Q ss_pred HHHHHHHHHhhhc
Q 035902 363 IDAKNIANDINLA 375 (381)
Q Consensus 363 ~~a~~~a~~i~~~ 375 (381)
.||+.+|++|.+.
T Consensus 337 ~~g~~aa~~i~g~ 349 (482)
T 1ojt_A 337 HEGHVAAENCAGH 349 (482)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 9999999999873
No 34
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=100.00 E-value=1.3e-35 Score=280.79 Aligned_cols=305 Identities=17% Similarity=0.179 Sum_probs=208.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCeee-ecC---Cccc-ccCCCCCC----CCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRMKL-HLA---KQFC-ELPHMPFP----SRT 70 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~-~~~---~~~~-~~~~~~~~----~~~ 70 (381)
|+++||+|||||++|+++|..|++.|.+|+|||++ .+||.|... +.+.... ... ..+. ....+..+ .++
T Consensus 1 M~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~ 79 (464)
T 2a8x_A 1 MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDY 79 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCH
Confidence 76799999999999999999999999999999998 566654321 1110000 000 0000 00000000 000
Q ss_pred CCCCC-H----HHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCC
Q 035902 71 PTFVP-R----ISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEV 145 (381)
Q Consensus 71 ~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~ 145 (381)
+.... . ..+.+.+.+.+++.+++++.++.+. .+ .+.+.+.+.++ +...++||+||+|||+.|..|++
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id--~~~v~V~~~~G---~~~~~~~d~lViAtG~~~~~~~~ 151 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF---AD--ANTLLVDLNDG---GTESVTFDNAIIATGSSTRLVPG 151 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE---SS--SSEEEEEETTS---CCEEEEEEEEEECCCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ec--CCeEEEEeCCC---ceEEEEcCEEEECCCCCCCCCCC
Confidence 00000 0 1233344566667788887776542 22 25556665443 22579999999999999988888
Q ss_pred CCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHH
Q 035902 146 PGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKL 225 (381)
Q Consensus 146 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~ 225 (381)
+|.+. .++++.+...... .+++++|||+|.+|+|+|..|.+.|.+|+++.|.+ .++|..+.++...+.
T Consensus 152 ~g~~~---~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l~------- 219 (464)
T 2a8x_A 152 TSLSA---NVVTYEEQILSRE-LPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP-RALPNEDADVSKEIE------- 219 (464)
T ss_dssp CCCBT---TEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHHHHHHHH-------
T ss_pred CCCCc---eEEecHHHhhccc-cCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCHHHHHHHH-------
Confidence 88653 2455444433333 57999999999999999999999999999999998 777765554444333
Q ss_pred HHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC--e--EEEc-CC
Q 035902 226 VDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN--E--VEFE-NG 298 (381)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~--~--v~~~-~g 298 (381)
+.+++.+|+++.+ ++++..+ . +.+. +|
T Consensus 220 ----------------------------------------------~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g 253 (464)
T 2a8x_A 220 ----------------------------------------------KQFKKLGVTILTATKVESIADGGSQVTVTVTKDG 253 (464)
T ss_dssp ----------------------------------------------HHHHHHTCEEECSCEEEEEEECSSCEEEEEESSS
T ss_pred ----------------------------------------------HHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCC
Confidence 3335567888877 7777643 2 3444 66
Q ss_pred --cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHHh
Q 035902 299 --KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIANDI 372 (381)
Q Consensus 299 --~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~i 372 (381)
+++++|.|++|+|++|+++.+.. +..++ ++++|++.+| +.++++.|||||+|||++.+. .|..||+.+|++|
T Consensus 254 ~~~~~~~D~vv~a~G~~p~~~~l~~-~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i 331 (464)
T 2a8x_A 254 VAQELKAEKVLQAIGFAPNVEGYGL-DKAGVALTDRKAIGVD-DYMRTNVGHIYAIGDVNGLLQLAHVAEAQGVVAAETI 331 (464)
T ss_dssp CEEEEEESEEEECSCEEECCSSSCH-HHHTCCBCTTSSBCCC-TTSBCSSTTEEECGGGGCSSCSHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCEEEECCCCCccCCCCCc-hhcCCccCCCCCEeEC-cCCccCCCCEEEeECcCCCccCHHHHHHHHHHHHHHh
Confidence 67999999999999999865322 22566 6778999999 567789999999999988654 7899999999999
Q ss_pred hh
Q 035902 373 NL 374 (381)
Q Consensus 373 ~~ 374 (381)
.+
T Consensus 332 ~g 333 (464)
T 2a8x_A 332 AG 333 (464)
T ss_dssp HT
T ss_pred cC
Confidence 87
No 35
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=100.00 E-value=3.4e-35 Score=279.27 Aligned_cols=307 Identities=15% Similarity=0.166 Sum_probs=208.4
Q ss_pred CC-cccEEEECCCHHHHHHHHHHHh-CCCCeEEEe--------cCCCCCCCcCC-CCCCCeeeecCCc----ccccCCCC
Q 035902 1 ME-EVPVVIVGAGPAGLATSACLNN-LSVPNIILE--------REDCSASLWKK-RAYDRMKLHLAKQ----FCELPHMP 65 (381)
Q Consensus 1 M~-~~~vvIIGaG~aG~~~A~~l~~-~g~~v~lie--------~~~~~g~~~~~-~~~~~~~~~~~~~----~~~~~~~~ 65 (381)
|+ ++||+|||||++|+++|+.|++ .|.+|+||| +...+||.|.. .+++...+..... ......+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g 83 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFG 83 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcC
Confidence 64 5899999999999999999999 999999999 35567776543 1111100000000 00000111
Q ss_pred CCCCCC-CCCCHHHHHHH-----------HHHHHHHh-CCccccccEEEEEEEeCCCCeEEEEEeecCC---CceEEEEe
Q 035902 66 FPSRTP-TFVPRISFINY-----------VDNYVSQM-GINPRYHRSVESASYDENAKAWIIVAKNTAL---DAYEEYVA 129 (381)
Q Consensus 66 ~~~~~~-~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~---~~~~~~~~ 129 (381)
+....+ ......++.++ +...+++. +++++.++ +..++ . .. |.+.+... ...+.+.|
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~--v~v~~~~~~~~~~~~~~~~ 156 (495)
T 2wpf_A 84 WEFDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGW-GSLES--K--NV--VVVRETADPKSAVKERLQA 156 (495)
T ss_dssp EECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESE-EEEEE--T--TE--EEEESSSSTTSCEEEEEEE
T ss_pred cccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeE-EEEee--C--CE--EEEeecCCccCCCCeEEEc
Confidence 000000 01122233332 23334555 77776654 44442 2 33 66552100 00267999
Q ss_pred CEEEEccCCCCCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhC---CCeeEEEEecCccee
Q 035902 130 RYLVVATGENGLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSC---GACTSIVVRGPVHVL 206 (381)
Q Consensus 130 d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~---g~~v~~i~r~~~~~~ 206 (381)
|+||+|||+.|..|+++|.+. +.++.++..... .+++++|||+|.+|+|+|..|.+. |.+|+++.|.+ .++
T Consensus 157 d~lViATGs~p~~p~i~G~~~----~~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~-~~l 230 (495)
T 2wpf_A 157 DHILLATGSWPQMPAIPGIEH----CISSNEAFYLPE-PPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNN-LIL 230 (495)
T ss_dssp EEEEECCCEEECCCCCTTGGG----CEEHHHHTTCSS-CCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSS-SSC
T ss_pred CEEEEeCCCCcCCCCCCCccc----cccHHHHHhhhh-cCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCC-ccc
Confidence 999999999999998888742 345444443333 579999999999999999999999 99999999998 677
Q ss_pred chhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--
Q 035902 207 TREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS-- 284 (381)
Q Consensus 207 p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-- 284 (381)
|..+.++...+ .+.+++.+|+++.+
T Consensus 231 ~~~d~~~~~~l-----------------------------------------------------~~~l~~~GV~i~~~~~ 257 (495)
T 2wpf_A 231 RGFDETIREEV-----------------------------------------------------TKQLTANGIEIMTNEN 257 (495)
T ss_dssp TTSCHHHHHHH-----------------------------------------------------HHHHHHTTCEEEESCC
T ss_pred cccCHHHHHHH-----------------------------------------------------HHHHHhCCCEEEeCCE
Confidence 76555444333 33445678888877
Q ss_pred cceEeCC-----eEEEcCCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccccc
Q 035902 285 ITSINRN-----EVEFENGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGL 358 (381)
Q Consensus 285 v~~v~~~-----~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~ 358 (381)
|+++..+ .+.+.+|+++++|.||+|+|++|+++.+.. +..++ ++++|++.+| +.++++.|||||+|||++.+
T Consensus 258 v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l-~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~ 335 (495)
T 2wpf_A 258 PAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRTNDLQL-GNVGVKLTPKGGVQVD-EFSRTNVPNIYAIGDITDRL 335 (495)
T ss_dssp EEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECCGGGTG-GGTTCCBCTTSSBCCC-TTCBCSSTTEEECGGGGCSC
T ss_pred EEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccccccch-hhcCccCCCCCCEEEC-CCCccCCCCEEEEeccCCCc
Confidence 7777643 467788989999999999999999864422 33676 7778999999 56778999999999999864
Q ss_pred c---CccHHHHHHHHHhhhc
Q 035902 359 H---GISIDAKNIANDINLA 375 (381)
Q Consensus 359 ~---~a~~~a~~~a~~i~~~ 375 (381)
. .|..||+.+|++|.+.
T Consensus 336 ~l~~~A~~~g~~aa~~i~g~ 355 (495)
T 2wpf_A 336 MLTPVAINEGAALVDTVFGN 355 (495)
T ss_dssp CCHHHHHHHHHHHHHHHHSS
T ss_pred cCHHHHHHHHHHHHHHhcCC
Confidence 4 8899999999999863
No 36
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=100.00 E-value=3.4e-35 Score=278.61 Aligned_cols=305 Identities=11% Similarity=0.088 Sum_probs=209.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCC-eeeecCC---ccc--ccCCCCCCCCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDR-MKLHLAK---QFC--ELPHMPFPSRTPTFVP 75 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~-~~~~~~~---~~~--~~~~~~~~~~~~~~~~ 75 (381)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|... +.+. ....... .+. .+..+..+.. ....+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 84 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS-EVRLN 84 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES-CEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC-CCccC
Confidence 5899999999999999999999999999999998888876431 1110 0000000 000 0000000000 00011
Q ss_pred HHHH-----------HHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 76 RISF-----------INYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 76 ~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
...+ ...+.+.+++.+++++.++.+ .+ +. +.+.|.+.++ +.+.++||+||+|||+.|..|+
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~~--~~--~~~~v~~~~g---g~~~~~~d~lViAtGs~p~~p~ 156 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGK-IT--GK--NQVTATKADG---GTQVIDTKNILIATGSEVTPFP 156 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEE-EE--ET--TEEEEECTTS---CEEEEEEEEEEECCCEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--cC--CEEEEEecCC---CcEEEEeCEEEECCCCCCCCCC
Confidence 1222 222345566778888777543 33 22 5555655431 1257999999999999999988
Q ss_pred CCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceec-hhhHHHHHHHHhhCcH
Q 035902 145 VPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLT-REIVFAGMLLLKFLPC 223 (381)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p-~~~~~~~~~~~~~l~~ 223 (381)
++|.+.. .++++.+...... .+++++|||+|.+|+|+|..|.+.|.+|+++.|.+ .++| ..+.++...+
T Consensus 157 i~g~~~~--~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~l------ 226 (474)
T 1zmd_A 157 GITIDED--TIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG-HVGGVGIDMEISKNF------ 226 (474)
T ss_dssp TCCCCSS--SEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSCSSCCHHHHHHH------
T ss_pred CCCCCcC--cEEcHHHHhhccc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-ccCCcccCHHHHHHH------
Confidence 8887542 2555555444333 47999999999999999999999999999999998 6777 4444433332
Q ss_pred HHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC--e-EEE---
Q 035902 224 KLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN--E-VEF--- 295 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~--~-v~~--- 295 (381)
.+.+++.+|+++.+ |+++..+ + +.+
T Consensus 227 -----------------------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~ 259 (474)
T 1zmd_A 227 -----------------------------------------------QRILQKQGFKFKLNTKVTGATKKSDGKIDVSIE 259 (474)
T ss_dssp -----------------------------------------------HHHHHHTTCEEECSEEEEEEEECTTSCEEEEEE
T ss_pred -----------------------------------------------HHHHHHCCCEEEeCceEEEEEEcCCceEEEEEE
Confidence 33446678888887 7777643 2 433
Q ss_pred ----cCCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHH
Q 035902 296 ----ENGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKN 367 (381)
Q Consensus 296 ----~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~ 367 (381)
.+++++++|.||+|+|++|+++.+.. +..++ ++++|++.+| +.++++.|+|||+|||++.+. .|..||+.
T Consensus 260 ~~~~~~~~~i~~D~vv~a~G~~p~~~~l~l-~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~ 337 (474)
T 1zmd_A 260 AASGGKAEVITCDVLLVCIGRRPFTKNLGL-EELGIELDPRGRIPVN-TRFQTKIPNIYAIGDVVAGPMLAHKAEDEGII 337 (474)
T ss_dssp ETTSCCCEEEEESEEEECSCEEECCTTSSH-HHHTCCCCTTSCCCCC-TTCBCSSTTEEECGGGSSSCCCHHHHHHHHHH
T ss_pred ecCCCCceEEEcCEEEECcCCCcCCCcCCc-hhcCCccCCCCCEEEC-cCCccCCCCEEEeeecCCCCccHHHHHHHHHH
Confidence 35678999999999999999865322 22556 6778999999 567789999999999988654 78999999
Q ss_pred HHHHhhhc
Q 035902 368 IANDINLA 375 (381)
Q Consensus 368 ~a~~i~~~ 375 (381)
+|++|.+.
T Consensus 338 aa~~i~~~ 345 (474)
T 1zmd_A 338 CVEGMAGG 345 (474)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 99999874
No 37
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.7e-36 Score=277.57 Aligned_cols=275 Identities=19% Similarity=0.277 Sum_probs=199.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.||+|||||+||+++|..|++.| +|+|||++++.+ |.....+. + ... ....+++..+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~~~l~~--------~--~~g---------~~~~~~~~~~~ 66 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSKPMLSH--------Y--IAG---------FIPRNRLFPYS 66 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCSTTHHH--------H--HTT---------SSCGGGGCSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cccchhHH--------H--HhC---------CCCHHHhccCC
Confidence 68999999999999999999999 999999987543 11110000 0 000 01111121222
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKYEN 163 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~ 163 (381)
.+++++++++++.+++|..++... +.|. .++ .++.||+||+|||+.|..|++||.+ .+++.....+
T Consensus 67 ~~~~~~~~v~~~~g~~v~~id~~~----~~V~-~~g-----~~~~~d~lViATGs~p~~p~i~G~~----~v~~~~~~~~ 132 (367)
T 1xhc_A 67 LDWYRKRGIEIRLAEEAKLIDRGR----KVVI-TEK-----GEVPYDTLVLATGARAREPQIKGKE----YLLTLRTIFD 132 (367)
T ss_dssp HHHHHHHTEEEECSCCEEEEETTT----TEEE-ESS-----CEEECSEEEECCCEEECCCCSBTGG----GEECCCSHHH
T ss_pred HHHHHhCCcEEEECCEEEEEECCC----CEEE-ECC-----cEEECCEEEECCCCCCCCCCCCCcC----CEEEEcCHHH
Confidence 344556799999998999887643 3366 444 5799999999999999999888832 2343333222
Q ss_pred CCCC-----CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhh
Q 035902 164 GGKF-----IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKF 238 (381)
Q Consensus 164 ~~~~-----~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (381)
...+ .+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++| .+.++...+
T Consensus 133 ~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~~~~~~l--------------------- 189 (367)
T 1xhc_A 133 ADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-MFLG-LDEELSNMI--------------------- 189 (367)
T ss_dssp HHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-CCTT-CCHHHHHHH---------------------
T ss_pred HHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-eecc-CCHHHHHHH---------------------
Confidence 1111 35899999999999999999999999999999988 6666 333332222
Q ss_pred cCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCeEEEcCCcEeeccEEEEecCCCCCc
Q 035902 239 GNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNEVEFENGKIEEFEAIIFATGYKSTV 316 (381)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~~ 316 (381)
.+.+++.+|+++.+ +++++.+++.+++|+ +++|.|++|+|++|++
T Consensus 190 --------------------------------~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 190 --------------------------------KDMLEETGVKFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp --------------------------------HHHHHHTTEEEECSCCEEEECSSEEEETTEE-EECSCEEEECCEEECC
T ss_pred --------------------------------HHHHHHCCCEEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCCcCH
Confidence 34456678999887 888887789999988 9999999999999998
Q ss_pred chhccccCCcccccCCCCCCCCCCCCCCCCcEEEEeccccc-------ccCccHHHHHHHHHhhhc
Q 035902 317 RNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTG-------LHGISIDAKNIANDINLA 375 (381)
Q Consensus 317 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~-------~~~a~~~a~~~a~~i~~~ 375 (381)
+ ++. . .++-..+| +.+| +.++++.|||||+|||+.. ...|..||+.+|++|.+.
T Consensus 237 ~-ll~-~-~gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 297 (367)
T 1xhc_A 237 D-LAR-R-SGIHTGRG-ILID-DNFRTSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKGE 297 (367)
T ss_dssp H-HHH-H-TTCCBSSS-EECC-TTSBCSSTTEEECGGGEEBTTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred H-HHH-h-CCCCCCCC-EEEC-CCcccCCCCEEEeEeeeecCCCCccHHHHHHHHHHHHHHHhcCC
Confidence 6 444 3 56533355 8888 5677889999999999642 128899999999999874
No 38
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.9e-35 Score=277.20 Aligned_cols=285 Identities=20% Similarity=0.263 Sum_probs=200.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHH
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRIS 78 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (381)
|+.+||+|||||++|+++|..|++. +.+|+|||+++..+.... ..+. .+.......+
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~----------------~~p~-----~~~~~~~~~~ 59 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC----------------GIPY-----VVEGLSTPDK 59 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---------------------------------------
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc----------------CCcc-----ccCCCCCHHH
Confidence 7779999999999999999999998 789999999885542110 0000 0111112223
Q ss_pred HHHHH-HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceee
Q 035902 79 FINYV-DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMH 157 (381)
Q Consensus 79 ~~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~ 157 (381)
+..+. +.+.++++++++++++|.+++.. .+.+.+.++ ...+.||+||+|||+.|..|+++|.+. .+ ++.
T Consensus 60 ~~~~~~~~~~~~~gi~v~~~~~v~~i~~~----~~~v~~~~g----~~~~~~d~lviAtG~~p~~p~i~G~~~-~~-v~~ 129 (449)
T 3kd9_A 60 LMYYPPEVFIKKRGIDLHLNAEVIEVDTG----YVRVRENGG----EKSYEWDYLVFANGASPQVPAIEGVNL-KG-VFT 129 (449)
T ss_dssp ------CTHHHHTTCEEETTCEEEEECSS----EEEEECSSS----EEEEECSEEEECCCEEECCCSCBTTTS-TT-EEC
T ss_pred hhhcCHHHHHHhcCcEEEecCEEEEEecC----CCEEEECCc----eEEEEcCEEEECCCCCCCCCCCCCCCC-CC-EEE
Confidence 33333 33446789999999999888643 355655443 257999999999999999999988763 22 332
Q ss_pred cCCCCCC-------CCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech-hhHHHHHHHHhhCcHHHHHHH
Q 035902 158 SSKYENG-------GKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR-EIVFAGMLLLKFLPCKLVDFI 229 (381)
Q Consensus 158 ~~~~~~~-------~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~-~~~~~~~~~~~~l~~~~~~~~ 229 (381)
.....+. ..+.+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .+++. .+.++...+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~l------------ 196 (449)
T 3kd9_A 130 ADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE-RVLRRSFDKEVTDIL------------ 196 (449)
T ss_dssp SCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCHHHHHHH------------
T ss_pred eCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCHHHHHHH------------
Confidence 2221110 12257899999999999999999999999999999998 66665 444433333
Q ss_pred HHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCe---EEEcCCcEeecc
Q 035902 230 VVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNE---VEFENGKIEEFE 304 (381)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~---v~~~~g~~~~~D 304 (381)
.+.+++. ++++.+ +.+++.+. ..+.+++++++|
T Consensus 197 -----------------------------------------~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D 234 (449)
T 3kd9_A 197 -----------------------------------------EEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAE 234 (449)
T ss_dssp -----------------------------------------HHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEEEECS
T ss_pred -----------------------------------------HHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECC
Confidence 2333455 777766 77776542 345678899999
Q ss_pred EEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccc-------c------ccCccHHHHHHHH
Q 035902 305 AIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRT-------G------LHGISIDAKNIAN 370 (381)
Q Consensus 305 ~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~-------~------~~~a~~~a~~~a~ 370 (381)
.||+|+|++|+++. +. . .++ ++++|++.+| +.++++.|||||+|||+. . ...|..||+.+|+
T Consensus 235 ~Vv~a~G~~p~~~l-~~-~-~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~l~~~A~~~g~~aa~ 310 (449)
T 3kd9_A 235 LVILATGIKPNIEL-AK-Q-LGVRIGETGAIWTN-EKMQTSVENVYAAGDVAETRHVITGRRVWVPLAPAGNKMGYVAGS 310 (449)
T ss_dssp EEEECSCEEECCHH-HH-H-TTCCBCTTSSBCCC-TTCBCSSTTEEECSTTBCEEBTTTCSEECCCCHHHHHHHHHHHHH
T ss_pred EEEEeeCCccCHHH-HH-h-CCccCCCCCCEEEC-CCCccCCCCEEEeeeeeeeccccCCceEEeccHHHHHHHHHHHHH
Confidence 99999999999863 33 3 666 7888999999 567789999999999974 1 1278999999999
Q ss_pred Hhhhc
Q 035902 371 DINLA 375 (381)
Q Consensus 371 ~i~~~ 375 (381)
+|.+.
T Consensus 311 ~i~g~ 315 (449)
T 3kd9_A 311 NIAGK 315 (449)
T ss_dssp HHTTC
T ss_pred HhcCC
Confidence 99874
No 39
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=100.00 E-value=3.1e-35 Score=278.11 Aligned_cols=302 Identities=15% Similarity=0.155 Sum_probs=203.2
Q ss_pred CC-cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCe-eeecCC---cccccCCCCCCCCCCCCC
Q 035902 1 ME-EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRM-KLHLAK---QFCELPHMPFPSRTPTFV 74 (381)
Q Consensus 1 M~-~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~ 74 (381)
|+ ++||+|||||++|+++|..|++.|.+|+|||+++.+||.|... +.+.. ...... .+..........+++...
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~ 80 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQ 80 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHH
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHH
Confidence 64 5899999999999999999999999999999999999976531 11100 000000 000000011001111100
Q ss_pred C-HHHHH-----HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCC
Q 035902 75 P-RISFI-----NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGL 148 (381)
Q Consensus 75 ~-~~~~~-----~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~ 148 (381)
. ...+. .++...+++.+++++.+ ++..++ . ..+.|...++ +...+.||+||+|||+.|..|+++|.
T Consensus 81 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~id--~--~~~~V~~~~g---~~~~~~~d~lviAtG~~p~~p~i~G~ 152 (466)
T 3l8k_A 81 DRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIKD--P--THVIVKTDEG---KEIEAETRYMIIASGAETAKLRLPGV 152 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEEE--T--TEEEEEETTS---CEEEEEEEEEEECCCEEECCCCCTTG
T ss_pred HHHHhheeccccchHHHHHHhCCCEEEEe-EEEEec--C--CeEEEEcCCC---cEEEEecCEEEECCCCCccCCCCCCc
Confidence 0 11111 33333444456665554 455554 2 4566766554 22339999999999999999999987
Q ss_pred CCCCcceeecCCCC---CCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechh-hHHHHHHHHhhCcHH
Q 035902 149 GSFEGEYMHSSKYE---NGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTRE-IVFAGMLLLKFLPCK 224 (381)
Q Consensus 149 ~~~~~~~~~~~~~~---~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~-~~~~~~~~~~~l~~~ 224 (381)
+. +.+..++. ......+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|.. +.++...+.+.+
T Consensus 153 ~~----~~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~d~~~~~~l~~~l--- 224 (466)
T 3l8k_A 153 EY----CLTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD-RALITLEDQDIVNTLLSIL--- 224 (466)
T ss_dssp GG----SBCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCCHHHHHHHHHHH---
T ss_pred cc----eEeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cCCCCCCCHHHHHHHHhcC---
Confidence 62 33333322 1223357999999999999999999999999999999998 677766 555444443322
Q ss_pred HHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC---Ce--EEEc-
Q 035902 225 LVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR---NE--VEFE- 296 (381)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~---~~--v~~~- 296 (381)
+ ++++.+ ++++.. ++ +.++
T Consensus 225 --------------------------------------------------~---v~i~~~~~v~~i~~~~~~~v~v~~~~ 251 (466)
T 3l8k_A 225 --------------------------------------------------K---LNIKFNSPVTEVKKIKDDEYEVIYST 251 (466)
T ss_dssp --------------------------------------------------C---CCEECSCCEEEEEEEETTEEEEEECC
T ss_pred --------------------------------------------------E---EEEEECCEEEEEEEcCCCcEEEEEEe
Confidence 1 555554 666654 32 5566
Q ss_pred -CCc--EeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHH
Q 035902 297 -NGK--IEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIA 369 (381)
Q Consensus 297 -~g~--~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a 369 (381)
+|+ ++++|.|++|+|++|++. +.. +..++ ++++| +.+| +.++++.|||||+|||++.+. .|..||+.+|
T Consensus 252 ~~G~~~~i~~D~vi~a~G~~p~~~-l~l-~~~gl~~~~~G-i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa 327 (466)
T 3l8k_A 252 KDGSKKSIFTNSVVLAAGRRPVIP-EGA-REIGLSISKTG-IVVD-ETMKTNIPNVFATGDANGLAPYYHAAVRMSIAAA 327 (466)
T ss_dssp TTSCCEEEEESCEEECCCEEECCC-TTT-GGGTCCBCSSS-BCCC-TTCBCSSTTEEECGGGTCSCCSHHHHHHHHHHHH
T ss_pred cCCceEEEEcCEEEECcCCCcccc-cch-hhcCceeCCCC-EeEC-CCccCCCCCEEEEEecCCCCccHhHHHHHHHHHH
Confidence 565 899999999999999997 412 33666 78889 9998 677789999999999998654 8999999999
Q ss_pred HHhhhc
Q 035902 370 NDINLA 375 (381)
Q Consensus 370 ~~i~~~ 375 (381)
++|.+.
T Consensus 328 ~~i~~~ 333 (466)
T 3l8k_A 328 NNIMAN 333 (466)
T ss_dssp HHHHTT
T ss_pred HHHhCC
Confidence 999864
No 40
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=7.2e-37 Score=281.27 Aligned_cols=272 Identities=17% Similarity=0.186 Sum_probs=198.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
+.+|+|||||+||++||..|...+.+|+|||+++..+. ..... +..+ ....+..++..+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y--~~~~l-------~~~l------------~g~~~~~~l~~~ 67 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY--YRPRL-------NEII------------AKNKSIDDILIK 67 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB--CGGGH-------HHHH------------HSCCCGGGTBSS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc--ccChh-------hHHH------------cCCCCHHHccCC
Confidence 47899999999999999999777899999999986541 00000 0000 001111222223
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKYE 162 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (381)
..+.+++++++++++++|++++.++ +. |++.++ +.+.||+||+|||+.|..|++||.+ .+++.....
T Consensus 68 ~~~~~~~~~i~~~~~~~V~~id~~~--~~--v~~~~g-----~~~~yd~lvlAtG~~p~~p~i~G~~----~v~~~~~~~ 134 (385)
T 3klj_A 68 KNDWYEKNNIKVITSEFATSIDPNN--KL--VTLKSG-----EKIKYEKLIIASGSIANKIKVPHAD----EIFSLYSYD 134 (385)
T ss_dssp CHHHHHHTTCEEECSCCEEEEETTT--TE--EEETTS-----CEEECSEEEECCCEEECCCCCTTCS----CEECCSSHH
T ss_pred CHHHHHHCCCEEEeCCEEEEEECCC--CE--EEECCC-----CEEECCEEEEecCCCcCCCCCCCCC----CeEEeCCHH
Confidence 3445567799999999999998765 44 777776 6899999999999999999999876 133333222
Q ss_pred CCCCC-----CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech-hhHHHHHHHHhhCcHHHHHHHHHHHhhh
Q 035902 163 NGGKF-----IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR-EIVFAGMLLLKFLPCKLVDFIVVMLSKM 236 (381)
Q Consensus 163 ~~~~~-----~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 236 (381)
+.... .+++++|||+|.+|+|+|..|++.|.+|+++.|.+ +++++ .+.+....+
T Consensus 135 d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~~~~~~~~------------------- 194 (385)
T 3klj_A 135 DALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE-YPLERQLDRDGGLFL------------------- 194 (385)
T ss_dssp HHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-SSCTTTSCHHHHHHH-------------------
T ss_pred HHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchhhcCHHHHHHH-------------------
Confidence 21111 27899999999999999999999999999999998 66665 333322222
Q ss_pred hhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCeEEEcCCcEeeccEEEEecCCCC
Q 035902 237 KFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNEVEFENGKIEEFEAIIFATGYKS 314 (381)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p 314 (381)
.+.+++.+++++.+ ++++ |+++++|.||+|+|++|
T Consensus 195 ----------------------------------~~~l~~~gV~~~~~~~v~~i---------g~~~~~D~vv~a~G~~p 231 (385)
T 3klj_A 195 ----------------------------------KDKLDRLGIKIYTNSNFEEM---------GDLIRSSCVITAVGVKP 231 (385)
T ss_dssp ----------------------------------HHHHHTTTCEEECSCCGGGC---------HHHHHHSEEEECCCEEE
T ss_pred ----------------------------------HHHHHhCCCEEEeCCEEEEc---------CeEEecCeEEECcCccc
Confidence 34456678888876 6655 67899999999999999
Q ss_pred CcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc-------cCccHHHHHHHHHhhhcc
Q 035902 315 TVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-------HGISIDAKNIANDINLAL 376 (381)
Q Consensus 315 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-------~~a~~~a~~~a~~i~~~l 376 (381)
+++. +. . .++-..+| +.+| +.++++.|+|||+|||+... ..|..||+.+|++|.+..
T Consensus 232 ~~~~-~~-~-~gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~~ 295 (385)
T 3klj_A 232 NLDF-IK-D-TEIASKRG-ILVN-DHMETSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGED 295 (385)
T ss_dssp CCGG-GT-T-SCCCBSSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTCC
T ss_pred Chhh-hh-h-cCCCcCCC-EEEC-CCcccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCCC
Confidence 9853 43 3 56644456 8888 56778999999999998631 279999999999998754
No 41
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=100.00 E-value=4.8e-35 Score=276.52 Aligned_cols=300 Identities=19% Similarity=0.219 Sum_probs=205.0
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCee-eecC--------CcccccCCCCCCCCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRMK-LHLA--------KQFCELPHMPFPSRT 70 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~-~~~~--------~~~~~~~~~~~~~~~ 70 (381)
|+++||+|||||+||+++|..|++.|.+|+|||++. +||.|... +.+... .... ...+++.... ..++
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~-~~~~ 81 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKP-ELDL 81 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCC-EECH
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCC-CcCH
Confidence 445899999999999999999999999999999987 77765421 111000 0000 0000111000 0000
Q ss_pred CCCC-CHHHHHHH----HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC-
Q 035902 71 PTFV-PRISFINY----VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE- 144 (381)
Q Consensus 71 ~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~- 144 (381)
+.+. ...++.++ +...+++.+++++.++.+. + +. +. +.+. + ..++||+||+|||+.|..|+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~--v~v~-g-----~~~~~d~lViATGs~p~~p~g 148 (464)
T 2eq6_A 82 KKLGGWRDQVVKKLTGGVGTLLKGNGVELLRGFARL-V--GP--KE--VEVG-G-----ERYGAKSLILATGSEPLELKG 148 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEE-E--ET--TE--EEET-T-----EEEEEEEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEE-c--cC--CE--EEEc-c-----EEEEeCEEEEcCCCCCCCCCC
Confidence 1000 01122222 3445566788887776442 3 22 33 5554 3 57999999999999988775
Q ss_pred CCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHH
Q 035902 145 VPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCK 224 (381)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~ 224 (381)
+++ + +.++++.+........+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+.++...+
T Consensus 149 i~~-~---~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l------- 216 (464)
T 2eq6_A 149 FPF-G---EDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP-EILPQGDPETAALL------- 216 (464)
T ss_dssp BCC-S---SSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHHHHHHH-------
T ss_pred CCC-C---CcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCHHHHHHH-------
Confidence 555 2 13555555444333357999999999999999999999999999999998 67776554443333
Q ss_pred HHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eEEEc-C
Q 035902 225 LVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EVEFE-N 297 (381)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v~~~-~ 297 (381)
.+.+++.+|+++.+ +++++.+ .+.++ +
T Consensus 217 ----------------------------------------------~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~ 250 (464)
T 2eq6_A 217 ----------------------------------------------RRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPA 250 (464)
T ss_dssp ----------------------------------------------HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEET
T ss_pred ----------------------------------------------HHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeec
Confidence 33345678888887 7777643 25555 6
Q ss_pred --Cc--EeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHH
Q 035902 298 --GK--IEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIA 369 (381)
Q Consensus 298 --g~--~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a 369 (381)
|+ ++++|.|++|+|++|+.+.+.. +..++ ++++|++.+| +.++++.|+|||+|||.+.+. .|..||+.+|
T Consensus 251 ~~g~~~~i~~D~vv~a~G~~p~~~~l~l-~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~l~~~A~~~g~~aa 328 (464)
T 2eq6_A 251 EGGEGEEVVVDKVLVAVGRKPRTEGLGL-EKAGVKVDERGFIRVN-ARMETSVPGVYAIGDAARPPLLAHKAMREGLIAA 328 (464)
T ss_dssp TCCSCEEEEESEEEECSCEEESCTTSSH-HHHTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTCSSCCHHHHHHHHHHHH
T ss_pred CCCceeEEEcCEEEECCCcccCCCCCCh-hhcCceecCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHH
Confidence 76 8999999999999999865422 22555 6778999999 567789999999999987654 7899999999
Q ss_pred HHhhhc
Q 035902 370 NDINLA 375 (381)
Q Consensus 370 ~~i~~~ 375 (381)
++|.+.
T Consensus 329 ~~i~g~ 334 (464)
T 2eq6_A 329 ENAAGK 334 (464)
T ss_dssp HHHTTC
T ss_pred HHhcCC
Confidence 999873
No 42
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=8.6e-36 Score=289.11 Aligned_cols=290 Identities=14% Similarity=0.184 Sum_probs=208.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
+||+|||||+||+++|..|++. +.+|+|||+++..+. ..... +. .... ........+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~--~~~~l-------~~---~~~~-------~~~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSF--ANCGL-------PY---HISG-------EIAQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB--CGGGH-------HH---HHTS-------SSCCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccc--cccCc-------hH---HhcC-------CcCChHHhhcc
Confidence 6899999999999999999998 789999999986541 10000 00 0000 00012223445
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCC
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
+++.+.++++++++++++|++++.+. +. +.+.+...+....+.||+||+|||+.|..|++||.+... +++....
T Consensus 63 ~~~~~~~~~~i~~~~~~~V~~id~~~--~~--v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~ipG~~~~~--v~~~~~~ 136 (565)
T 3ntd_A 63 TPESFKARFNVEVRVKHEVVAIDRAA--KL--VTVRRLLDGSEYQESYDTLLLSPGAAPIVPPIPGVDNPL--THSLRNI 136 (565)
T ss_dssp CHHHHHHHHCCEEETTEEEEEEETTT--TE--EEEEETTTCCEEEEECSEEEECCCEEECCCCCTTCCSTT--EECCSSH
T ss_pred CHHHHHHhcCcEEEECCEEEEEECCC--CE--EEEEecCCCCeEEEECCEEEECCCCCCCCCCCCCCCCCC--EEEeCCH
Confidence 55666677899999999999998765 55 444432222335799999999999999999999986422 3333221
Q ss_pred CCC-------CCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHh
Q 035902 162 ENG-------GKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLS 234 (381)
Q Consensus 162 ~~~-------~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~ 234 (381)
.+. ....+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .++|..+.++...+.+
T Consensus 137 ~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l~~--------------- 200 (565)
T 3ntd_A 137 PDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD-QVMTPVDREMAGFAHQ--------------- 200 (565)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSCTTSCHHHHHHHHH---------------
T ss_pred HHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC-ccchhcCHHHHHHHHH---------------
Confidence 111 11357899999999999999999999999999999998 7777655544443333
Q ss_pred hhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC---------------------C
Q 035902 235 KMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR---------------------N 291 (381)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~---------------------~ 291 (381)
.+++.+++++.+ ++++.. +
T Consensus 201 --------------------------------------~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~ 242 (565)
T 3ntd_A 201 --------------------------------------AIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKG 242 (565)
T ss_dssp --------------------------------------HHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTC
T ss_pred --------------------------------------HHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCC
Confidence 334556666665 666543 1
Q ss_pred --eEEEcCCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccc-------cc---
Q 035902 292 --EVEFENGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRT-------GL--- 358 (381)
Q Consensus 292 --~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~-------~~--- 358 (381)
.+.+.+|+++++|.||+|+|++|+++ ++. . .++ ++++|++.+| +.++++.|||||+|||+. .+
T Consensus 243 ~~~v~~~~g~~i~~D~vi~a~G~~p~~~-l~~-~-~g~~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~ 318 (565)
T 3ntd_A 243 HLSLTLSNGELLETDLLIMAIGVRPETQ-LAR-D-AGLAIGELGGIKVN-AMMQTSDPAIYAVGDAVEEQDFVTGQACLV 318 (565)
T ss_dssp EEEEEETTSCEEEESEEEECSCEEECCH-HHH-H-HTCCBCTTSSBCCC-TTCBCSSTTEEECGGGBCEEBTTTCCEECC
T ss_pred cEEEEEcCCCEEEcCEEEECcCCccchH-HHH-h-CCcccCCCCCEEEC-CCcccCCCCEEEeeeeEeeccccCCceeec
Confidence 35667888999999999999999986 343 3 566 7788999999 567789999999999973 21
Q ss_pred ---cCccHHHHHHHHHhhhcc
Q 035902 359 ---HGISIDAKNIANDINLAL 376 (381)
Q Consensus 359 ---~~a~~~a~~~a~~i~~~l 376 (381)
..|..||+.+|++|.+.-
T Consensus 319 ~~~~~A~~~g~~aa~~i~g~~ 339 (565)
T 3ntd_A 319 PLAGPANRQGRMAADNMFGRE 339 (565)
T ss_dssp CCHHHHHHHHHHHHHHHTTCC
T ss_pred ccHHHHHHHHHHHHHHhcCCC
Confidence 168899999999998743
No 43
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.4e-35 Score=279.94 Aligned_cols=302 Identities=17% Similarity=0.248 Sum_probs=197.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCeee-ec---C-----CcccccCCCCCCCCCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRMKL-HL---A-----KQFCELPHMPFPSRTP 71 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~-~~---~-----~~~~~~~~~~~~~~~~ 71 (381)
.++||+|||||++|+++|..|++.|.+|+|||++. +||.|... +.+...+ .. . ...+++... ...+++
T Consensus 1 m~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~ 78 (500)
T 1onf_A 1 MVYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK-FSFNLP 78 (500)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC-CCCCHH
T ss_pred CccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC-CccCHH
Confidence 15999999999999999999999999999999984 77765431 1111000 00 0 000111100 000111
Q ss_pred CCCC-H----HHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeec--------CCCceEEEEeCEEEEccCC
Q 035902 72 TFVP-R----ISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNT--------ALDAYEEYVARYLVVATGE 138 (381)
Q Consensus 72 ~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~--------~~~~~~~~~~d~vIlAtG~ 138 (381)
.+.. . ..+...+...+++.+++++.++.+ .++ . +. +.+.+. .......+.||+||+|||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~-~id--~--~~--v~v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs 151 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDLYEGTAS-FLS--E--NR--ILIKGTKDNNNKDNGPLNEEILEGRNILIAVGN 151 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCC-CC--------------------------------CBSSEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEE-Eee--C--CE--EEEEeccccccccccCCCceEEEeCEEEECCCC
Confidence 1100 0 122223445556678887666432 222 1 23 333220 0001156899999999999
Q ss_pred CCCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHH
Q 035902 139 NGLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLL 218 (381)
Q Consensus 139 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~ 218 (381)
.|..|+++|.+. +.++.++..... +++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+.++...+
T Consensus 152 ~p~~p~i~G~~~----~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~~~~l- 223 (500)
T 1onf_A 152 KPVFPPVKGIEN----TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-RILRKFDESVINVL- 223 (500)
T ss_dssp CBCCCSCTTGGG----CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-SSCTTSCHHHHHHH-
T ss_pred CCCCCCCCCCCc----ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC-ccCcccchhhHHHH-
Confidence 999998888642 455544444333 8999999999999999999999999999999998 67776655544433
Q ss_pred hhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC-----
Q 035902 219 KFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----- 291 (381)
Q Consensus 219 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----- 291 (381)
.+.+++.+|+++.+ +++++.+
T Consensus 224 ----------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~ 251 (500)
T 1onf_A 224 ----------------------------------------------------ENDMKKNNINIVTFADVVEIKKVSDKNL 251 (500)
T ss_dssp ----------------------------------------------------HHHHHHTTCEEECSCCEEEEEESSTTCE
T ss_pred ----------------------------------------------------HHHHHhCCCEEEECCEEEEEEEcCCceE
Confidence 33446678888887 7777642
Q ss_pred eEEEcCCcE-eeccEEEEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEeccc---------------
Q 035902 292 EVEFENGKI-EEFEAIIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSR--------------- 355 (381)
Q Consensus 292 ~v~~~~g~~-~~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~--------------- 355 (381)
.+.+++|++ +++|.|++|+|++|+++.+.. +..++-.++|++.+| +.++++.|+|||+|||+
T Consensus 252 ~v~~~~g~~~~~~D~vi~a~G~~p~~~~l~~-~~~g~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~~~~~g~~ 329 (500)
T 1onf_A 252 SIHLSDGRIYEHFDHVIYCVGRSPDTENLKL-EKLNVETNNNYIVVD-ENQRTSVNNIYAVGDCCMVKKSKEIEDLNLLK 329 (500)
T ss_dssp EEEETTSCEEEEESEEEECCCBCCTTTTSSC-TTTTCCBSSSCEEEC-TTCBCSSSSEEECSTTEEEC------------
T ss_pred EEEECCCcEEEECCEEEECCCCCcCCCCCCc-hhcCccccCCEEEEC-CCcccCCCCEEEEecccccccccccccccccc
Confidence 466778887 999999999999999864422 336662278999999 56678999999999998
Q ss_pred -------------------cccc---CccHHHHHHHHHhhh
Q 035902 356 -------------------TGLH---GISIDAKNIANDINL 374 (381)
Q Consensus 356 -------------------~~~~---~a~~~a~~~a~~i~~ 374 (381)
+.+. .|..||+.+|++|.+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~g~~aa~~i~g 370 (500)
T 1onf_A 330 LYNEERYLNKKENVTEDIFYNVQLTPVAINAGRLLADRLFL 370 (500)
T ss_dssp ------------------CBCCCCHHHHHHHHHHHHHHHHS
T ss_pred ccccccccccccccccccCCcccchhHHHHHHHHHHHHHhC
Confidence 2222 789999999999986
No 44
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=100.00 E-value=9.3e-35 Score=277.13 Aligned_cols=310 Identities=15% Similarity=0.148 Sum_probs=212.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHhC---CCCeEEEecCCCCCCCcCCC-CCCC-eeeecCC---cccccCCCCCCCCC-CC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNL---SVPNIILEREDCSASLWKKR-AYDR-MKLHLAK---QFCELPHMPFPSRT-PT 72 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~---g~~v~lie~~~~~g~~~~~~-~~~~-~~~~~~~---~~~~~~~~~~~~~~-~~ 72 (381)
+++||+|||||++|+++|+.|++. |.+|+|||++. +||.|... +.+. ....... ....+..+..+... ..
T Consensus 1 M~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~ 79 (499)
T 1xdi_A 1 MVTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDA 79 (499)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCC
Confidence 158999999999999999999999 99999999988 77754321 1110 0000000 00000111000000 00
Q ss_pred CCCHHH-----------HHHHHHHHHHHhCCccccccEEEEEEEeC--CCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 73 FVPRIS-----------FINYVDNYVSQMGINPRYHRSVESASYDE--NAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 73 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
..+... +...+.+.+++.+++++.++ +..++... +.+.+.|...++ +...+.||+||+|||+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~~~~~~~~~~~~V~~~~g---~~~~~~~d~lviATGs~ 155 (499)
T 1xdi_A 80 KISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGR-GELIDSTPGLARHRIKATAADG---STSEHEADVVLVATGAS 155 (499)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESE-EEECCSSSCCSSEEEEEECTTS---CEEEEEESEEEECCCEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEecCcccCCCCEEEEEeCCC---cEEEEEeCEEEEcCCCC
Confidence 112222 23334566677888887775 55444310 013444544433 12479999999999999
Q ss_pred CCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHh
Q 035902 140 GLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLK 219 (381)
Q Consensus 140 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~ 219 (381)
|..|+++|.+.. .+++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|..+.++...+
T Consensus 156 p~~p~i~g~~~~--~v~~~~~~~~~~~-~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~~~~l-- 229 (499)
T 1xdi_A 156 PRILPSAQPDGE--RILTWRQLYDLDA-LPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD-HVLPYEDADAALVL-- 229 (499)
T ss_dssp ECCCGGGCCCSS--SEEEGGGGGGCSS-CCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-SSSCCSSHHHHHHH--
T ss_pred CCCCCCCCCCcC--cEEehhHhhhhhc-cCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCHHHHHHH--
Confidence 998888887642 2556555544333 57999999999999999999999999999999998 67776555444333
Q ss_pred hCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eE
Q 035902 220 FLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EV 293 (381)
Q Consensus 220 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v 293 (381)
.+.+++.+++++.+ |+++..+ .+
T Consensus 230 ---------------------------------------------------~~~l~~~GV~i~~~~~V~~i~~~~~~v~v 258 (499)
T 1xdi_A 230 ---------------------------------------------------EESFAERGVRLFKNARAASVTRTGAGVLV 258 (499)
T ss_dssp ---------------------------------------------------HHHHHHTTCEEETTCCEEEEEECSSSEEE
T ss_pred ---------------------------------------------------HHHHHHCCCEEEeCCEEEEEEEeCCEEEE
Confidence 33446678888877 7777654 24
Q ss_pred EEcCCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHH
Q 035902 294 EFENGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIA 369 (381)
Q Consensus 294 ~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a 369 (381)
.+.+|+++++|.||+|+|++|+++.+.. +..++ ++++|++.+| +.++++.|+|||+|||++.+. .|..||+.+|
T Consensus 259 ~~~~g~~i~aD~Vv~a~G~~p~~~~l~l-~~~gl~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~l~~~A~~~g~~aa 336 (499)
T 1xdi_A 259 TMTDGRTVEGSHALMTIGSVPNTSGLGL-ERVGIQLGRGNYLTVD-RVSRTLATGIYAAGDCTGLLPLASVAAMQGRIAM 336 (499)
T ss_dssp EETTSCEEEESEEEECCCEEECCSSSCT-TTTTCCCBTTTBCCCC-SSSBCSSTTEEECSGGGTSCSCHHHHHHHHHHHH
T ss_pred EECCCcEEEcCEEEECCCCCcCCCcCCc-hhcCceECCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHH
Confidence 4567889999999999999999864322 33666 6778999999 567789999999999988654 7999999999
Q ss_pred HHhhhc
Q 035902 370 NDINLA 375 (381)
Q Consensus 370 ~~i~~~ 375 (381)
++|.+.
T Consensus 337 ~~i~g~ 342 (499)
T 1xdi_A 337 YHALGE 342 (499)
T ss_dssp HHHTTC
T ss_pred HHhcCC
Confidence 999874
No 45
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=100.00 E-value=2.4e-35 Score=280.47 Aligned_cols=287 Identities=18% Similarity=0.187 Sum_probs=203.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC---CCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLS---VPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISF 79 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g---~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (381)
++||+|||||++|+++|..|++.| .+|+|||+++..+..+.. +..... . ... . ..++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-----~~~~~~----~--~~~---~------~~~~ 94 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-----MALWIG----E--QIA---G------PEGL 94 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-----HHHHHT----T--SSS---C------SGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-----cchhhc----C--ccC---C------HHHh
Confidence 489999999999999999999988 899999998755421110 000000 0 000 0 0011
Q ss_pred HHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCC------CCC-
Q 035902 80 INYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLG------SFE- 152 (381)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~------~~~- 152 (381)
.....+.+++++++++++++|..++.+. +.+.+.. ++ +...+.||+||+|||+.|..|++||.+ .|.
T Consensus 95 ~~~~~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~-~g---~~~~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~ 168 (490)
T 2bc0_A 95 FYSDKEELESLGAKVYMESPVQSIDYDA--KTVTALV-DG---KNHVETYDKLIFATGSQPILPPIKGAEIKEGSLEFEA 168 (490)
T ss_dssp BSCCHHHHHHTTCEEETTCCEEEEETTT--TEEEEEE-TT---EEEEEECSEEEECCCEEECCCSCBTCCBCTTCTTCCB
T ss_pred hhcCHHHHHhCCCEEEeCCEEEEEECCC--CEEEEEe-CC---cEEEEECCEEEECCCCCcCCCCCCCcccccccccccc
Confidence 1111334456789988999999988655 5543331 22 225799999999999999999898876 221
Q ss_pred --cceeecCCCCCC------C-CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceec-hhhHHHHHHHHhhCc
Q 035902 153 --GEYMHSSKYENG------G-KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLT-REIVFAGMLLLKFLP 222 (381)
Q Consensus 153 --~~~~~~~~~~~~------~-~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p-~~~~~~~~~~~~~l~ 222 (381)
..+++...+.+. . ...+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++| ..+.++...+
T Consensus 169 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~l----- 242 (490)
T 2bc0_A 169 TLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD-TCLAGYYDRDLTDLM----- 242 (490)
T ss_dssp SSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCHHHHHHH-----
T ss_pred ccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc-chhhhHHHHHHHHHH-----
Confidence 124443222111 1 1468999999999999999999999999999999998 5655 3333332222
Q ss_pred HHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCe----EEEc
Q 035902 223 CKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNE----VEFE 296 (381)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~----v~~~ 296 (381)
.+.+++.+|+++.+ |++++.++ +.+
T Consensus 243 ------------------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~- 273 (490)
T 2bc0_A 243 ------------------------------------------------AKNMEEHGIQLAFGETVKEVAGNGKVEKIIT- 273 (490)
T ss_dssp ------------------------------------------------HHHHHTTTCEEEETCCEEEEECSSSCCEEEE-
T ss_pred ------------------------------------------------HHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-
Confidence 44456778888877 78886542 444
Q ss_pred CCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccccc-------------cCcc
Q 035902 297 NGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-------------HGIS 362 (381)
Q Consensus 297 ~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-------------~~a~ 362 (381)
+|+++++|.||+|+|++|+++ ++. . . + ++++|++.+| +.++++.|||||+|||+... ..|.
T Consensus 274 ~g~~i~~D~Vi~a~G~~p~~~-ll~-~-~-l~~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~ 348 (490)
T 2bc0_A 274 DKNEYDVDMVILAVGFRPNTT-LGN-G-K-IDLFRNGAFLVN-KRQETSIPGVYAIGDCATIYDNATRDTNYIALASNAV 348 (490)
T ss_dssp SSCEEECSEEEECCCEEECCG-GGT-T-C-SCBCTTSCBCCC-TTCBCSSTTEEECGGGBCEEETTTTEEECCCCHHHHH
T ss_pred CCcEEECCEEEECCCCCcChH-HHH-h-h-hccCCCCCEEEC-CCcccCCCCEEEeeeeEEeccccCCceeecccHHHHH
Confidence 778999999999999999986 444 3 3 4 6778999999 56778999999999998631 2789
Q ss_pred HHHHHHHHHhhhc
Q 035902 363 IDAKNIANDINLA 375 (381)
Q Consensus 363 ~~a~~~a~~i~~~ 375 (381)
.||+.+|++|.+.
T Consensus 349 ~qg~~aa~~i~g~ 361 (490)
T 2bc0_A 349 RTGIVAAHNACGT 361 (490)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999999874
No 46
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=7.9e-35 Score=276.02 Aligned_cols=306 Identities=13% Similarity=0.119 Sum_probs=211.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCe-eeecC---------CcccccCCCCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRM-KLHLA---------KQFCELPHMPFPSRTP 71 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~-~~~~~---------~~~~~~~~~~~~~~~~ 71 (381)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|... +.+.. ..... ...+++.......++.
T Consensus 6 ~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (470)
T 1dxl_A 6 ENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLA 85 (470)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCHH
Confidence 5899999999999999999999999999999998888876431 11100 00000 0000000000000001
Q ss_pred CCC-CHH----HHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCC
Q 035902 72 TFV-PRI----SFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVP 146 (381)
Q Consensus 72 ~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~ 146 (381)
.+. ... .+.+.+...+++.+++++.++.+. + +. +.+.|.+.++ +...++||+||+|||+.|..|+++
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~~~v~~~~G---~~~~i~~d~lIiAtGs~p~~p~~~ 157 (470)
T 1dxl_A 86 AMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-V--SP--SEISVDTIEG---ENTVVKGKHIIIATGSDVKSLPGV 157 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-E--ET--TEEEECCSSS---CCEEEECSEEEECCCEEECCBTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cC--CEEEEEeCCC---ceEEEEcCEEEECCCCCCCCCCCC
Confidence 000 011 123334556667789888887553 3 33 4555654433 225799999999999999988888
Q ss_pred CCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHH
Q 035902 147 GLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLV 226 (381)
Q Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~ 226 (381)
|.+.. .++++.+...... .+++++|||+|.+|+|+|..|.+.|.+|+++.|.+ .++|..+.++...+
T Consensus 158 g~~~~--~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~~~~~~l--------- 224 (470)
T 1dxl_A 158 TIDEK--KIVSSTGALALSE-IPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS-EIVPTMDAEIRKQF--------- 224 (470)
T ss_dssp CCCSS--SEECHHHHTTCSS-CCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCHHHHHHH---------
T ss_pred CCCcc--cEEeHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-cccccccHHHHHHH---------
Confidence 86531 2455554443333 57999999999999999999999999999999998 67776555443333
Q ss_pred HHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eEEEc---C
Q 035902 227 DFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EVEFE---N 297 (381)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v~~~---~ 297 (381)
.+.+++.+|+++.+ +++++.+ .+.++ +
T Consensus 225 --------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~ 260 (470)
T 1dxl_A 225 --------------------------------------------QRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAG 260 (470)
T ss_dssp --------------------------------------------HHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSS
T ss_pred --------------------------------------------HHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCC
Confidence 33345667888877 8888754 23443 4
Q ss_pred C--cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHH
Q 035902 298 G--KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIAND 371 (381)
Q Consensus 298 g--~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~ 371 (381)
| +++++|.||+|+|++|+++.+.. +..++ ++++|++.+| +.++++.|||||+|||++.+. .|..||+.+|++
T Consensus 261 g~~~~~~~D~vv~a~G~~p~~~~l~~-~~~gl~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~ 338 (470)
T 1dxl_A 261 GEQTIIEADVVLVSAGRTPFTSGLNL-DKIGVETDKLGRILVN-ERFSTNVSGVYAIGDVIPGPMLAHKAEEDGVACVEY 338 (470)
T ss_dssp CCCEEEEESEEECCCCEEECCTTSCC-TTTTCCBCSSSCBCCC-TTCBCSSTTEEECSTTSSSCCCHHHHHHHHHHHHHH
T ss_pred CcceEEECCEEEECCCCCcCCCCCCc-hhcCCccCCCCCEeEC-cCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHH
Confidence 5 68999999999999999865422 33666 6778999999 567789999999999988654 789999999999
Q ss_pred hhhc
Q 035902 372 INLA 375 (381)
Q Consensus 372 i~~~ 375 (381)
|.+.
T Consensus 339 i~g~ 342 (470)
T 1dxl_A 339 LAGK 342 (470)
T ss_dssp HTTS
T ss_pred HcCC
Confidence 9874
No 47
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-34 Score=274.99 Aligned_cols=301 Identities=16% Similarity=0.222 Sum_probs=204.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCeee-ecC---CcccccCCCCCCCC----C-CC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRMKL-HLA---KQFCELPHMPFPSR----T-PT 72 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~~-~~~---~~~~~~~~~~~~~~----~-~~ 72 (381)
++||+|||||++|+++|..|++.|.+|+|||++ .+||.|... +.+...+ ... ........+.+... . ..
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 589999999999999999999999999999997 577766421 1110000 000 00000000000000 0 00
Q ss_pred CCCHHHHH-----------HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCC
Q 035902 73 FVPRISFI-----------NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 73 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~ 141 (381)
......+. ..+...+++.+++++.++ +..+ + .+.+.+...++ +...+.||+||+|||+.|.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~--~~~~~v~~~~g---~~~~~~~d~lviAtGs~p~ 161 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN--K--DGNVEVQKRDN---TTEVYSANHILVATGGKAI 161 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC--T--TSCEEEEESSS---CCEEEEEEEEEECCCEEEC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--e--CCEEEEEeCCC---cEEEEEeCEEEEcCCCCCC
Confidence 11122222 233344555677766553 4333 2 24455655444 1247999999999999999
Q ss_pred CC-CCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhh
Q 035902 142 IP-EVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKF 220 (381)
Q Consensus 142 ~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~ 220 (381)
.| ++||.+. +.++.++.... ..+++++|||+|.+|+|+|..|.+.|.+|+++.|.+ .++|..+.++...+.
T Consensus 162 ~p~~i~g~~~----~~~~~~~~~l~-~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~~~~l~-- 233 (479)
T 2hqm_A 162 FPENIPGFEL----GTDSDGFFRLE-EQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGE-TVLRKFDECIQNTIT-- 233 (479)
T ss_dssp CCTTSTTGGG----SBCHHHHHHCS-SCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHHHHHHH--
T ss_pred CCCCCCCccc----ccchHHHhccc-ccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCC-ccccccCHHHHHHHH--
Confidence 88 8888642 23333322222 258999999999999999999999999999999998 666765554444333
Q ss_pred CcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC------e
Q 035902 221 LPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN------E 292 (381)
Q Consensus 221 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~------~ 292 (381)
+.+++.+|+++.+ |+++..+ .
T Consensus 234 ---------------------------------------------------~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~ 262 (479)
T 2hqm_A 234 ---------------------------------------------------DHYVKEGINVHKLSKIVKVEKNVETDKLK 262 (479)
T ss_dssp ---------------------------------------------------HHHHHHTCEEECSCCEEEEEECC-CCCEE
T ss_pred ---------------------------------------------------HHHHhCCeEEEeCCEEEEEEEcCCCcEEE
Confidence 3345567888877 7777642 4
Q ss_pred EEEcCC-cEeeccEEEEecCCCCCcchh-ccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHH
Q 035902 293 VEFENG-KIEEFEAIIFATGYKSTVRNW-LKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAK 366 (381)
Q Consensus 293 v~~~~g-~~~~~D~vi~a~G~~p~~~~~-~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~ 366 (381)
+.+++| +++++|.||+|+|++|++ .+ +. . .++ ++++|++.+| +.++++.|||||+|||.+.+. .|..||+
T Consensus 263 v~~~~G~~~i~~D~vv~a~G~~p~~-~l~l~-~-~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~ 338 (479)
T 2hqm_A 263 IHMNDSKSIDDVDELIWTIGRKSHL-GMGSE-N-VGIKLNSHDQIIAD-EYQNTNVPNIYSLGDVVGKVELTPVAIAAGR 338 (479)
T ss_dssp EEETTSCEEEEESEEEECSCEEECC-CSSGG-G-GTCCBCTTSCBCCC-TTCBCSSTTEEECGGGTTSSCCHHHHHHHHH
T ss_pred EEECCCcEEEEcCEEEECCCCCCcc-ccChh-h-cCceECCCCCEeEC-CCCccCCCCEEEEEecCCCcccHHHHHHHHH
Confidence 667788 789999999999999998 44 33 3 666 7788999999 566789999999999987644 8899999
Q ss_pred HHHHHhhhc
Q 035902 367 NIANDINLA 375 (381)
Q Consensus 367 ~~a~~i~~~ 375 (381)
.+|++|.+.
T Consensus 339 ~aa~~i~~~ 347 (479)
T 2hqm_A 339 KLSNRLFGP 347 (479)
T ss_dssp HHHHHHHSC
T ss_pred HHHHHhcCC
Confidence 999999864
No 48
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=1.2e-34 Score=273.49 Aligned_cols=303 Identities=14% Similarity=0.185 Sum_probs=207.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCe-eeecC--------CcccccCCCCCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRM-KLHLA--------KQFCELPHMPFPSRTPT 72 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~-~~~~~--------~~~~~~~~~~~~~~~~~ 72 (381)
++||+|||||++|+++|..|++.|.+|+|||++ .+||.|... +.+.. ..... ...++........+++.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 489999999999999999999999999999998 677765321 11100 00000 00000000000000000
Q ss_pred CCC-HH----HHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCC
Q 035902 73 FVP-RI----SFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPG 147 (381)
Q Consensus 73 ~~~-~~----~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g 147 (381)
... .. .+.+.+.+.+++.+++++.++.+. + +. +.+.+.+.++ ...++||+||+|||+.|..|+++|
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-i--d~--~~v~V~~~~G----~~~i~~d~lViATGs~p~~~~~~g 152 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF-V--DA--NTVRVVNGDS----AQTYTFKNAIIATGSRPIELPNFK 152 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE-E--ET--TEEEEEETTE----EEEEECSEEEECCCEEECCBTTBC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE-c--cC--CeEEEEeCCC----cEEEEeCEEEEecCCCCCCCCCCC
Confidence 000 11 133344566677788888776543 3 23 5566665433 157999999999999998888887
Q ss_pred CCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHH
Q 035902 148 LGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVD 227 (381)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~ 227 (381)
.+. .+.++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+.++...+
T Consensus 153 ~~~---~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l---------- 217 (455)
T 1ebd_A 153 FSN---RILDSTGALNLGE-VPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG-EILSGFEKQMAAII---------- 217 (455)
T ss_dssp CCS---SEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCHHHHHHH----------
T ss_pred ccc---eEecHHHHhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccccCHHHHHHH----------
Confidence 653 2455444433322 57999999999999999999999999999999998 67665544433332
Q ss_pred HHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC--eE--EEc---CC
Q 035902 228 FIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN--EV--EFE---NG 298 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~--~v--~~~---~g 298 (381)
.+.+++.+++++.+ |++++.+ ++ .+. ++
T Consensus 218 -------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~ 254 (455)
T 1ebd_A 218 -------------------------------------------KKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGET 254 (455)
T ss_dssp -------------------------------------------HHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEE
T ss_pred -------------------------------------------HHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCce
Confidence 33345667888877 7777642 33 343 45
Q ss_pred cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHHhhh
Q 035902 299 KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIANDINL 374 (381)
Q Consensus 299 ~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~i~~ 374 (381)
+++++|.||+|+|++|+++.+.. +..++ ++++|++.+| +.++++.|+|||+|||.+.+. .|..||+.+|++|.+
T Consensus 255 ~~~~~D~vv~a~G~~p~~~~l~~-~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 332 (455)
T 1ebd_A 255 KTIDADYVLVTVGRRPNTDELGL-EQIGIKMTNRGLIEVD-QQCRTSVPNIFAIGDIVPGPALAHKASYEGKVAAEAIAG 332 (455)
T ss_dssp EEEEESEEEECSCEEESCSSSST-TTTTCCBCTTSCBCCC-TTCBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHTS
T ss_pred eEEEcCEEEECcCCCcccCcCCh-hhcCCccCCCCCEeeC-CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHHHcC
Confidence 68999999999999999865322 33666 6778999999 567789999999999988654 789999999999987
Q ss_pred c
Q 035902 375 A 375 (381)
Q Consensus 375 ~ 375 (381)
.
T Consensus 333 ~ 333 (455)
T 1ebd_A 333 H 333 (455)
T ss_dssp C
T ss_pred C
Confidence 4
No 49
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=100.00 E-value=9.9e-35 Score=275.85 Aligned_cols=300 Identities=15% Similarity=0.122 Sum_probs=206.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCee-eec---------CCcccccCCCCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRMK-LHL---------AKQFCELPHMPFPSRTP 71 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~~-~~~---------~~~~~~~~~~~~~~~~~ 71 (381)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|... +.+... ... ....++.+.. . .
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~----~-~ 79 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVN----G-D 79 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEEC----S-C
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccC----C-C
Confidence 4899999999999999999999999999999988888865431 000000 000 0000000000 0 0
Q ss_pred CCCCHHHH-----------HHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEE------EEeCEEEE
Q 035902 72 TFVPRISF-----------INYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEE------YVARYLVV 134 (381)
Q Consensus 72 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~------~~~d~vIl 134 (381)
......++ ...+.+.+++.+++++.++.+. .+ .+.+.|.+.++. ... ++||+||+
T Consensus 80 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~--~~~v~V~~~~G~---~~~~~~~~~i~~d~lVi 151 (478)
T 1v59_A 80 IKINVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF---ED--ETKIRVTPVDGL---EGTVKEDHILDVKNIIV 151 (478)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---SS--SSEEEEECCTTC---TTCCSSCEEEEEEEEEE
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---cc--CCeEEEEecCCC---cccccccceEEeCEEEE
Confidence 01111222 2234455666788888877653 12 356666654431 123 99999999
Q ss_pred ccCCCCCCCCCCCCCCCCc-ceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHH
Q 035902 135 ATGENGLIPEVPGLGSFEG-EYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFA 213 (381)
Q Consensus 135 AtG~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~ 213 (381)
|||+.|. .+||.+ +.+ .+.++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+.++
T Consensus 152 AtGs~p~--~~~g~~-~~~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~ 226 (478)
T 1v59_A 152 ATGSEVT--PFPGIE-IDEEKIVSSTGALSLKE-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP-QIGASMDGEV 226 (478)
T ss_dssp CCCEEEC--CCTTCC-CCSSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSSSSCHHH
T ss_pred CcCCCCC--CCCCCC-CCCceEEcHHHHHhhhc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-ccccccCHHH
Confidence 9999973 345654 223 3455444443333 48999999999999999999999999999999998 6777655444
Q ss_pred HHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC-
Q 035902 214 GMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR- 290 (381)
Q Consensus 214 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~- 290 (381)
...+ .+.+++.+|+++.+ ++++..
T Consensus 227 ~~~l-----------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~ 253 (478)
T 1v59_A 227 AKAT-----------------------------------------------------QKFLKKQGLDFKLSTKVISAKRN 253 (478)
T ss_dssp HHHH-----------------------------------------------------HHHHHHTTCEEECSEEEEEEEEE
T ss_pred HHHH-----------------------------------------------------HHHHHHCCCEEEeCCEEEEEEEe
Confidence 4333 33446678888887 777764
Q ss_pred -C----eEEEc-----CCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc
Q 035902 291 -N----EVEFE-----NGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH 359 (381)
Q Consensus 291 -~----~v~~~-----~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~ 359 (381)
+ .+.+. +++++++|.||+|+|++|+++.++. +..++ ++++|++.+| +.++++.|||||+|||...+.
T Consensus 254 ~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~l~l-~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~ 331 (478)
T 1v59_A 254 DDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIAGLGA-EKIGLEVDKRGRLVID-DQFNSKFPHIKVVGDVTFGPM 331 (478)
T ss_dssp TTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCTTSCT-TTTTCCBCTTSCBCCC-TTSBCSSTTEEECGGGSSSCC
T ss_pred cCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCCCCCc-hhcCceeCCCCCEeEC-cCCccCCCCEEEeeccCCCcc
Confidence 2 34555 4568999999999999999864433 33666 6778999999 567789999999999988654
Q ss_pred ---CccHHHHHHHHHhhhc
Q 035902 360 ---GISIDAKNIANDINLA 375 (381)
Q Consensus 360 ---~a~~~a~~~a~~i~~~ 375 (381)
.|..||+.+|++|.+.
T Consensus 332 ~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 332 LAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp CHHHHHHHHHHHHHHHHHS
T ss_pred cHHHHHHHHHHHHHHHcCC
Confidence 8999999999999873
No 50
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=100.00 E-value=6.1e-35 Score=274.74 Aligned_cols=300 Identities=16% Similarity=0.177 Sum_probs=201.7
Q ss_pred CC-cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCC-eeeec---------CCcccccCCCCCCC
Q 035902 1 ME-EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDR-MKLHL---------AKQFCELPHMPFPS 68 (381)
Q Consensus 1 M~-~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~-~~~~~---------~~~~~~~~~~~~~~ 68 (381)
|+ ++||+|||||++|+++|..|++.|.+|+|||++ .+||.|... +.+. +.... ....+++.......
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~ 79 (450)
T 1ges_A 1 MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKF 79 (450)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEE
T ss_pred CCccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCcc
Confidence 53 589999999999999999999999999999998 677765421 1110 00000 00000000000000
Q ss_pred CCCCCCC-H----HHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 69 RTPTFVP-R----ISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 69 ~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
++..+.. . ..+...+...+++.+++++.++. ..++ . .. |.+ ++ ..+.||+||+|||+.|..|
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~-~~i~--~--~~--v~~-~g-----~~~~~d~lviAtGs~p~~p 146 (450)
T 1ges_A 80 NWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFA-RFVD--A--KT--LEV-NG-----ETITADHILIATGGRPSHP 146 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCC-EEEE--T--TE--EEE-TT-----EEEEEEEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEE-EEec--C--CE--EEE-CC-----EEEEeCEEEECCCCCCCCC
Confidence 0010000 0 11222333444566888766643 3332 2 33 555 43 6799999999999999998
Q ss_pred CCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcH
Q 035902 144 EVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPC 223 (381)
Q Consensus 144 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~ 223 (381)
++||.+. +.+..++..... .+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+.++...+
T Consensus 147 ~i~g~~~----~~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l------ 214 (450)
T 1ges_A 147 DIPGVEY----GIDSDGFFALPA-LPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD-APLPSFDPMISETL------ 214 (450)
T ss_dssp CSTTGGG----SBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHHHHHHH------
T ss_pred CCCCccc----eecHHHhhhhhh-cCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC-chhhhhhHHHHHHH------
Confidence 8888642 233333322222 47999999999999999999999999999999988 66665544433333
Q ss_pred HHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC-----eEEEc
Q 035902 224 KLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN-----EVEFE 296 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~-----~v~~~ 296 (381)
.+.+++.+++++.+ +++++.+ .+.++
T Consensus 215 -----------------------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~ 247 (450)
T 1ges_A 215 -----------------------------------------------VEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELE 247 (450)
T ss_dssp -----------------------------------------------HHHHHHHSCEEECSCCEEEEEECTTSCEEEEET
T ss_pred -----------------------------------------------HHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEEC
Confidence 33345567788777 7777642 46778
Q ss_pred CCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHHh
Q 035902 297 NGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIANDI 372 (381)
Q Consensus 297 ~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~i 372 (381)
+|+++++|.||+|+|++|+++.+.. +..++ ++++|++.+| +.++++.|||||+|||.+.+. .|..||+.+|++|
T Consensus 248 ~g~~i~~D~vv~a~G~~p~~~~l~~-~~~gl~~~~~g~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i 325 (450)
T 1ges_A 248 DGRSETVDCLIWAIGREPANDNINL-EAAGVKTNEKGYIVVD-KYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSERL 325 (450)
T ss_dssp TSCEEEESEEEECSCEEESCTTSCH-HHHTCCBCTTSCBCCC-TTSBCSSTTEEECSGGGTSCCCHHHHHHHHHHHHHHH
T ss_pred CCcEEEcCEEEECCCCCcCCCCCCc-hhcCceECCCCCEeEC-CCCccCCCCEEEEeccCCCCccHHHHHHHHHHHHHHH
Confidence 8989999999999999999864422 22566 6789999999 566789999999999987544 7899999999999
Q ss_pred hhc
Q 035902 373 NLA 375 (381)
Q Consensus 373 ~~~ 375 (381)
.+.
T Consensus 326 ~~~ 328 (450)
T 1ges_A 326 FNN 328 (450)
T ss_dssp HTT
T ss_pred cCC
Confidence 863
No 51
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=100.00 E-value=2.4e-34 Score=271.49 Aligned_cols=299 Identities=17% Similarity=0.262 Sum_probs=203.2
Q ss_pred CC-cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCC-eeeecC---CcccccCCCCCCCCCCCCC
Q 035902 1 ME-EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDR-MKLHLA---KQFCELPHMPFPSRTPTFV 74 (381)
Q Consensus 1 M~-~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~ 74 (381)
|+ ++||+|||||++|+++|..|++.|.+|+|||++ .+||.|... +.+. +..... ........+.+... ....
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~ 78 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS-GGTL 78 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC----C
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC-CCCc
Confidence 54 599999999999999999999999999999998 677765421 1110 000000 00000000000000 0011
Q ss_pred CHHHHH-----------HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 75 PRISFI-----------NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 75 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
....+. ..+...+++.+++++.++ +..++ . .. |.+ ++ ..+.||+||+|||+.|..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i~--~--~~--v~~-~g-----~~~~~d~lviAtGs~p~~p 145 (463)
T 2r9z_A 79 DWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGH-ARFVD--A--HT--IEV-EG-----QRLSADHIVIATGGRPIVP 145 (463)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEEEE--T--TE--EEE-TT-----EEEEEEEEEECCCEEECCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeE-EEEcc--C--CE--EEE-CC-----EEEEcCEEEECCCCCCCCC
Confidence 222222 223344456678876664 33332 2 33 555 43 5799999999999999988
Q ss_pred CCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcH
Q 035902 144 EVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPC 223 (381)
Q Consensus 144 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~ 223 (381)
++||.+. +.+..++..... .+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .+++..+.++...+
T Consensus 146 ~i~G~~~----~~~~~~~~~~~~-~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~-~~l~~~~~~~~~~l------ 213 (463)
T 2r9z_A 146 RLPGAEL----GITSDGFFALQQ-QPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED-RLLFQFDPLLSATL------ 213 (463)
T ss_dssp SCTTGGG----SBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHHHHHHH------
T ss_pred CCCCccc----eecHHHHhhhhc-cCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-ccccccCHHHHHHH------
Confidence 8888642 233333322222 47899999999999999999999999999999998 56665444333322
Q ss_pred HHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eEEEcC
Q 035902 224 KLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EVEFEN 297 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v~~~~ 297 (381)
.+.+++.+++++.+ +++++.+ .+.+++
T Consensus 214 -----------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~ 246 (463)
T 2r9z_A 214 -----------------------------------------------AENMHAQGIETHLEFAVAALERDAQGTTLVAQD 246 (463)
T ss_dssp -----------------------------------------------HHHHHHTTCEEESSCCEEEEEEETTEEEEEETT
T ss_pred -----------------------------------------------HHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeC
Confidence 33445678888887 7777642 467788
Q ss_pred Cc-EeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHHh
Q 035902 298 GK-IEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIANDI 372 (381)
Q Consensus 298 g~-~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~i 372 (381)
|+ ++++|.|++|+|++|+++.+.. +..++ ++++|++.+| +.++++.|||||+|||.+.+. .|..||+.+|++|
T Consensus 247 G~~~i~~D~vv~a~G~~p~~~~l~~-~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i 324 (463)
T 2r9z_A 247 GTRLEGFDSVIWAVGRAPNTRDLGL-EAAGIEVQSNGMVPTD-AYQNTNVPGVYALGDITGRDQLTPVAIAAGRRLAERL 324 (463)
T ss_dssp CCEEEEESEEEECSCEEESCTTSCH-HHHTCCCCTTSCCCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCEEEECCCCCcCCCCCCc-hhcCCccCCCCCEeEC-CCCccCCCCEEEEeecCCCcccHHHHHHHHHHHHHHH
Confidence 98 8999999999999999864422 22556 6789999999 566789999999999987544 7899999999999
Q ss_pred hhc
Q 035902 373 NLA 375 (381)
Q Consensus 373 ~~~ 375 (381)
.+.
T Consensus 325 ~g~ 327 (463)
T 2r9z_A 325 FDG 327 (463)
T ss_dssp HSC
T ss_pred cCC
Confidence 863
No 52
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=100.00 E-value=3.1e-34 Score=271.62 Aligned_cols=306 Identities=15% Similarity=0.131 Sum_probs=208.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCe-eeecC---------CcccccCC-CCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRM-KLHLA---------KQFCELPH-MPFPSRT 70 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~-~~~~~---------~~~~~~~~-~~~~~~~ 70 (381)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|... +.+.. ..... ...++++. .....++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 5899999999999999999999999999999998888866431 11100 00000 00001000 0000000
Q ss_pred CCCCC-HH----HHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCC
Q 035902 71 PTFVP-RI----SFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEV 145 (381)
Q Consensus 71 ~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~ 145 (381)
..... .. .+...+...+++.+++++.++.+ .+ +. +.+.+.+.++ +...+.||+||+|||+.|..|++
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~-~i--~~--~~~~v~~~~G---~~~~~~~d~lviAtG~~p~~p~~ 153 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGS-FE--TA--HSIRVNGLDG---KQEMLETKKTIIATGSEPTELPF 153 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEE-EE--ET--TEEEEEETTS---CEEEEEEEEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ee--eC--CEEEEEecCC---ceEEEEcCEEEECCCCCcCCCCC
Confidence 10000 11 12223455666778888777644 23 22 4555655433 23579999999999999988888
Q ss_pred CCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHH
Q 035902 146 PGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKL 225 (381)
Q Consensus 146 ~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~ 225 (381)
+|.+. . .++++.+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|..+.++...+
T Consensus 154 ~g~~~-~-~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~~~~l-------- 221 (468)
T 2qae_A 154 LPFDE-K-VVLSSTGALALPR-VPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP-RCAPTLDEDVTNAL-------- 221 (468)
T ss_dssp BCCCS-S-SEECHHHHHTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHHHHHHH--------
T ss_pred CCCCc-C-ceechHHHhhccc-CCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC-cccccCCHHHHHHH--------
Confidence 88653 1 2455544433333 57999999999999999999999999999999998 67776554433222
Q ss_pred HHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhh-cCCCeEEccC--cceEeCC----eEEEc--
Q 035902 226 VDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKI-RKGEIQVFPS--ITSINRN----EVEFE-- 296 (381)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~--v~~v~~~----~v~~~-- 296 (381)
.+.+ ++.+++++.+ |++++.+ .+.++
T Consensus 222 ---------------------------------------------~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~ 256 (468)
T 2qae_A 222 ---------------------------------------------VGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGK 256 (468)
T ss_dssp ---------------------------------------------HHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC
T ss_pred ---------------------------------------------HHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcC
Confidence 3445 5678888887 7777653 24454
Q ss_pred CC--cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccc-ccc---CccHHHHHHH
Q 035902 297 NG--KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRT-GLH---GISIDAKNIA 369 (381)
Q Consensus 297 ~g--~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~-~~~---~a~~~a~~~a 369 (381)
+| +++++|.||+|+|++|+++.+.. +..++ ++++|++.+| +.++++.|||||+|||++ .+. .|..||+.+|
T Consensus 257 ~g~~~~i~~D~vv~a~G~~p~~~~l~l-~~~gl~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~A~~~g~~aa 334 (468)
T 2qae_A 257 NGKRETVTCEALLVSVGRRPFTGGLGL-DKINVAKNERGFVKIG-DHFETSIPDVYAIGDVVDKGPMLAHKAEDEGVACA 334 (468)
T ss_dssp ---EEEEEESEEEECSCEEECCTTSCH-HHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGBSSSCSCHHHHHHHHHHHH
T ss_pred CCceEEEECCEEEECCCcccCCCCCCc-hhcCCccCCCCCEeEC-CCcccCCCCEEEeeccCCCCCccHhHHHHHHHHHH
Confidence 66 68999999999999999865322 22556 6778999999 567789999999999998 544 7899999999
Q ss_pred HHhhhc
Q 035902 370 NDINLA 375 (381)
Q Consensus 370 ~~i~~~ 375 (381)
++|.+.
T Consensus 335 ~~i~~~ 340 (468)
T 2qae_A 335 EILAGK 340 (468)
T ss_dssp HHHTTC
T ss_pred HHHcCC
Confidence 999874
No 53
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=100.00 E-value=5.6e-35 Score=277.42 Aligned_cols=299 Identities=16% Similarity=0.186 Sum_probs=202.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC-CCCCCee-eecC---CcccccCCCCCCCCCCCCCCHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK-RAYDRMK-LHLA---KQFCELPHMPFPSRTPTFVPRI 77 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~ 77 (381)
++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.. .+.+... .... ........+.++.. .......
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 97 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC-EGKFNWR 97 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC-CCCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC-CCccCHH
Confidence 589999999999999999999999999999976 57775432 1111100 0000 00000011111111 1122222
Q ss_pred HHHH-----------HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC---
Q 035902 78 SFIN-----------YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP--- 143 (381)
Q Consensus 78 ~~~~-----------~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~--- 143 (381)
.+.+ .+...+++.++++..+. +..++ . ..+.+. .++ .+++||+||+|||+.|..|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~~~--~--~~~~v~-~~g-----~~~~~d~lviAtG~~p~~p~~~ 166 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGH-AAFTS--D--PKPTIE-VSG-----KKYTAPHILIATGGMPSTPHES 166 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESC-EEECS--C--SSCEEE-ETT-----EEEECSCEEECCCEEECCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeE-EEEee--C--CeEEEE-ECC-----EEEEeeEEEEccCCCCCCCCcC
Confidence 3222 33344455566665543 22221 1 224455 333 6799999999999999888
Q ss_pred CCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcH
Q 035902 144 EVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPC 223 (381)
Q Consensus 144 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~ 223 (381)
+++|.+. ..++..+..... .+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .+++..+.++...+
T Consensus 167 ~i~G~~~----~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~~~~~------ 234 (478)
T 3dk9_A 167 QIPGASL----GITSDGFFQLEE-LPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-KVLRSFDSMISTNC------ 234 (478)
T ss_dssp TSTTGGG----SBCHHHHTTCCS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHHHHHH------
T ss_pred CCCCCce----eEchHHhhchhh-cCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC-ccccccCHHHHHHH------
Confidence 8888652 233333333333 48999999999999999999999999999999988 66676665544433
Q ss_pred HHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC--e----EEE
Q 035902 224 KLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN--E----VEF 295 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~--~----v~~ 295 (381)
.+.+++.+|+++.+ ++++..+ + +.+
T Consensus 235 -----------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~ 267 (478)
T 3dk9_A 235 -----------------------------------------------TEELENAGVEVLKFSQVKEVKKTLSGLEVSMVT 267 (478)
T ss_dssp -----------------------------------------------HHHHHHTTCEEETTEEEEEEEECSSSEEEEEEE
T ss_pred -----------------------------------------------HHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEE
Confidence 33446678888887 7777632 3 445
Q ss_pred cC-------CcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHH
Q 035902 296 EN-------GKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISID 364 (381)
Q Consensus 296 ~~-------g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~ 364 (381)
.+ |+++++|.|++|+|++|++..+.. +..++ ++++|++.+| +.++++.|||||+|||.+.+. .|..|
T Consensus 268 ~~~~~g~~~g~~~~~D~vi~a~G~~p~~~~l~l-~~~g~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~A~~~ 345 (478)
T 3dk9_A 268 AVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSL-NKLGIQTDDKGHIIVD-EFQNTNVKGIYAVGDVCGKALLTPVAIAA 345 (478)
T ss_dssp CCTTSCCEEEEEEEESEEEECSCEEESCTTSCG-GGGTCCBCTTCCBCCC-TTCBCSSTTEEECGGGGCSSCCHHHHHHH
T ss_pred ccCCCCcccceEEEcCEEEEeeccccCCCCCCc-hhcCCeeCCCCCEeeC-CCcccCCCCEEEEEecCCCCccHhHHHHH
Confidence 54 257899999999999999964422 33666 7889999999 567789999999999997655 88999
Q ss_pred HHHHHHHhhhc
Q 035902 365 AKNIANDINLA 375 (381)
Q Consensus 365 a~~~a~~i~~~ 375 (381)
|+.+|++|.+.
T Consensus 346 g~~aa~~i~~~ 356 (478)
T 3dk9_A 346 GRKLAHRLFEY 356 (478)
T ss_dssp HHHHHHHHHSC
T ss_pred HHHHHHHHcCC
Confidence 99999999875
No 54
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=100.00 E-value=3.8e-35 Score=277.78 Aligned_cols=305 Identities=15% Similarity=0.184 Sum_probs=203.8
Q ss_pred CC-cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCe-eeecCCcccccCCCCCCCCC---CCCC
Q 035902 1 ME-EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRM-KLHLAKQFCELPHMPFPSRT---PTFV 74 (381)
Q Consensus 1 M~-~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~ 74 (381)
|+ ++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.+. +++.. .......++.....++...+ ....
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 79 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTI 79 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCC
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCcc
Confidence 53 599999999999999999999999999999998 678876531 11100 00000000000011110000 1111
Q ss_pred CHHHHH-------HHHH-----HHHHHh-CCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCC
Q 035902 75 PRISFI-------NYVD-----NYVSQM-GINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 75 ~~~~~~-------~~~~-----~~~~~~-~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~ 141 (381)
....+. +++. +.+++. +++++.+ ++..++ . +.+.|.+.++ +...++||+||+|||+.|.
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~~~~~~--~--~~~~v~~~~g---~~~~~~~d~lviAtGs~p~ 151 (467)
T 1zk7_A 80 DRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHG-EARFKD--D--QSLTVRLNEG---GERVVMFDRCLVATGASPA 151 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEE-EEEEEE--T--TEEEEEETTS---SEEEEECSEEEECCCEEEC
T ss_pred CHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEE-EEEEcc--C--CEEEEEeCCC---ceEEEEeCEEEEeCCCCCC
Confidence 222222 2222 233334 6665544 344443 2 4555665443 2357999999999999999
Q ss_pred CCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhC
Q 035902 142 IPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFL 221 (381)
Q Consensus 142 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l 221 (381)
.|+++|.+.. .+++..+...... .+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++| .+.++...+
T Consensus 152 ~p~i~G~~~~--~~~~~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~-~~~~~~~~l---- 222 (467)
T 1zk7_A 152 VPPIPGLKES--PYWTSTEALASDT-IPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-LFFR-EDPAIGEAV---- 222 (467)
T ss_dssp CCCCTTTTTS--CCBCHHHHHHCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTT-SCHHHHHHH----
T ss_pred CCCCCCCCcC--ceecHHHHhcccc-cCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC-ccCC-CCHHHHHHH----
Confidence 9999987643 1334333333222 58999999999999999999999999999999998 6666 444333333
Q ss_pred cHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC--e--EEE
Q 035902 222 PCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN--E--VEF 295 (381)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~--~--v~~ 295 (381)
.+.+++.+++++.+ |+++..+ . +.+
T Consensus 223 -------------------------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~ 253 (467)
T 1zk7_A 223 -------------------------------------------------TAAFRAEGIEVLEHTQASQVAHMDGEFVLTT 253 (467)
T ss_dssp -------------------------------------------------HHHHHHTTCEEETTCCEEEEEEETTEEEEEE
T ss_pred -------------------------------------------------HHHHHhCCCEEEcCCEEEEEEEeCCEEEEEE
Confidence 33445677888876 7777542 2 444
Q ss_pred cCCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHH
Q 035902 296 ENGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIAND 371 (381)
Q Consensus 296 ~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~ 371 (381)
+ +.++++|.||+|+|.+|+++.+.. +..++ ++++|++.+| +..+++.|+||++|||+..+. .|..||+.+|.+
T Consensus 254 ~-~~~i~aD~Vv~a~G~~p~~~~l~l-~~~gl~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~ 330 (467)
T 1zk7_A 254 T-HGELRADKLLVATGRTPNTRSLAL-DAAGVTVNAQGAIVID-QGMRTSNPNIYAAGDCTDQPQFVYVAAAAGTRAAIN 330 (467)
T ss_dssp T-TEEEEESEEEECSCEEESCTTSCG-GGGTCCBCTTSCBCCC-TTCBCSSTTEEECSTTBSSCCCHHHHHHHHHHHHHH
T ss_pred C-CcEEEcCEEEECCCCCcCCCcCCc-hhcCCcCCCCCCEEEC-CCcccCCCCEEEEeccCCCcccHHHHHHHHHHHHHH
Confidence 4 568999999999999999865422 33566 6778999998 567789999999999988754 889999999999
Q ss_pred hhhc
Q 035902 372 INLA 375 (381)
Q Consensus 372 i~~~ 375 (381)
|.+.
T Consensus 331 i~~~ 334 (467)
T 1zk7_A 331 MTGG 334 (467)
T ss_dssp HTTC
T ss_pred HcCC
Confidence 9864
No 55
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=100.00 E-value=9.5e-35 Score=274.66 Aligned_cols=297 Identities=14% Similarity=0.144 Sum_probs=204.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC-CCCCCeee-e---cCCcccccCCCCCCCCCCCCCCHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK-RAYDRMKL-H---LAKQFCELPHMPFPSRTPTFVPRI 77 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~ 77 (381)
++||+|||||++|+++|+.|++.|.+|+|||+ ..+||.|.. .+.+...+ . ........+.+.+....+ .....
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~-~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGES-RFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCC-EECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCC-CcCHH
Confidence 48999999999999999999999999999999 667775532 11110000 0 000000000010000000 11111
Q ss_pred -----------HHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEE-eecCCCceEEEEeCEEEEccCCCCC-CCC
Q 035902 78 -----------SFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVA-KNTALDAYEEYVARYLVVATGENGL-IPE 144 (381)
Q Consensus 78 -----------~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~-~~~~~~~~~~~~~d~vIlAtG~~~~-~~~ 144 (381)
.+..++...+++.++++..+ ++..+ + ... +.+ .++ ..+.||+||+|||+.|. .|.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g-~~~~i---~-~~~--v~~~~~~-----~~~~~d~lviAtG~~p~~~p~ 150 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEILDT-RAELA---G-PNT--VKLLASG-----KTVTAERIVIAVGGHPSPHDA 150 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEES-CEEES---S-SSE--EEETTTT-----EEEEEEEEEECCCEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEe---e-CCE--EEEecCC-----eEEEeCEEEEecCCCcccCCC
Confidence 23334455556667776655 33322 1 133 555 233 68999999999999999 888
Q ss_pred CCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHH
Q 035902 145 VPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCK 224 (381)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~ 224 (381)
++|.+. +.++.++.... ..+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++..+.++...+
T Consensus 151 i~G~~~----~~~~~~~~~~~-~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~-~~l~~~~~~~~~~l------- 217 (463)
T 4dna_A 151 LPGHEL----CITSNEAFDLP-ALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK-EILSRFDQDMRRGL------- 217 (463)
T ss_dssp STTGGG----CBCHHHHTTCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHHHHHHH-------
T ss_pred CCCccc----cccHHHHhhhh-cCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCHHHHHHH-------
Confidence 888653 23333333322 358999999999999999999999999999999998 56666554443333
Q ss_pred HHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC-----eEE-Ec
Q 035902 225 LVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN-----EVE-FE 296 (381)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~-----~v~-~~ 296 (381)
.+.+++.+++++.+ |+++..+ .+. ++
T Consensus 218 ----------------------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~ 251 (463)
T 4dna_A 218 ----------------------------------------------HAAMEEKGIRILCEDIIQSVSADADGRRVATTMK 251 (463)
T ss_dssp ----------------------------------------------HHHHHHTTCEEECSCCEEEEEECTTSCEEEEESS
T ss_pred ----------------------------------------------HHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcC
Confidence 34446678888886 7777653 466 77
Q ss_pred CCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHHh
Q 035902 297 NGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIANDI 372 (381)
Q Consensus 297 ~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~i 372 (381)
+|+ +++|.||+|+|++|++..+.. +..++ ++++|++.+| +.++++.|||||+|||++.+. .|..||+.+|++|
T Consensus 252 ~g~-i~aD~Vv~a~G~~p~~~~l~l-~~~g~~~~~~G~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i 328 (463)
T 4dna_A 252 HGE-IVADQVMLALGRMPNTNGLGL-EAAGVRTNELGAIIVD-AFSRTSTPGIYALGDVTDRVQLTPVAIHEAMCFIETE 328 (463)
T ss_dssp SCE-EEESEEEECSCEEESCTTSST-GGGTCCBCTTSCBCCC-TTCBCSSTTEEECSGGGSSCCCHHHHHHHHHHHHHHH
T ss_pred CCe-EEeCEEEEeeCcccCCCCCCc-cccCceECCCCCEeEC-cCCCCCCCCEEEEEecCCCCCChHHHHHHHHHHHHHH
Confidence 887 999999999999999865422 33666 7889999999 567789999999999998654 8899999999999
Q ss_pred hhc
Q 035902 373 NLA 375 (381)
Q Consensus 373 ~~~ 375 (381)
.+.
T Consensus 329 ~g~ 331 (463)
T 4dna_A 329 YKN 331 (463)
T ss_dssp HSS
T ss_pred cCC
Confidence 874
No 56
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=100.00 E-value=2.8e-34 Score=272.56 Aligned_cols=308 Identities=16% Similarity=0.185 Sum_probs=206.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCC------CCCcCCC-CCCCee-eecC---------CcccccCCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCS------ASLWKKR-AYDRMK-LHLA---------KQFCELPHM 64 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~------g~~~~~~-~~~~~~-~~~~---------~~~~~~~~~ 64 (381)
+++||+|||||++|+++|+.|++.|.+|+|||++... ||.|... +.+... .... ...+++...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 4699999999999999999999999999999998744 4433211 111000 0000 000011000
Q ss_pred CCCCCCCCCCC-HHH----HHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 65 PFPSRTPTFVP-RIS----FINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 65 ~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
....+++.... ... +...+....++.+++++.+..+. .+. ..+.+...++ +...+.||+||+|||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~--~~~~v~~~~g---~~~~~~~d~lvlAtG~~ 153 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL---LAG--KKVEVTAADG---SSQVLDTENVILASGSK 153 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE---CST--TCEEEECTTS---CEEEECCSCEEECCCEE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecC--CEEEEEcCCC---ceEEEEcCEEEEcCCCC
Confidence 00000010000 111 22233345556677776554332 222 4555554333 33679999999999999
Q ss_pred CCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHh
Q 035902 140 GLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLK 219 (381)
Q Consensus 140 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~ 219 (381)
|..|+.++.+. ..++++.+..... ..+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|..+.++...+
T Consensus 154 p~~~~~~~~~~--~~v~~~~~~~~~~-~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l-- 227 (476)
T 3lad_A 154 PVEIPPAPVDQ--DVIVDSTGALDFQ-NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD-KFLPAVDEQVAKEA-- 227 (476)
T ss_dssp ECCCTTSCCCS--SSEEEHHHHTSCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCHHHHHHH--
T ss_pred CCCCCCCCCCc--ccEEechhhhccc-cCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-CcCcccCHHHHHHH--
Confidence 87665544332 2345554444333 368999999999999999999999999999999998 67776555444333
Q ss_pred hCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eE
Q 035902 220 FLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EV 293 (381)
Q Consensus 220 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v 293 (381)
.+.+++.+|+++.+ +++++.+ .+
T Consensus 228 ---------------------------------------------------~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v 256 (476)
T 3lad_A 228 ---------------------------------------------------QKILTKQGLKILLGARVTGTEVKNKQVTV 256 (476)
T ss_dssp ---------------------------------------------------HHHHHHTTEEEEETCEEEEEEECSSCEEE
T ss_pred ---------------------------------------------------HHHHHhCCCEEEECCEEEEEEEcCCEEEE
Confidence 33446678888877 7777643 35
Q ss_pred EEcCC---cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHH
Q 035902 294 EFENG---KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAK 366 (381)
Q Consensus 294 ~~~~g---~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~ 366 (381)
.+.++ +++++|.||+|+|++|+++.++. +..++ ++++|++.+| +.++++.|||||+|||.+.+. .|..||+
T Consensus 257 ~~~~~~g~~~~~~D~vi~a~G~~p~~~~l~~-~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~ 334 (476)
T 3lad_A 257 KFVDAEGEKSQAFDKLIVAVGRRPVTTDLLA-ADSGVTLDERGFIYVD-DYCATSVPGVYAIGDVVRGAMLAHKASEEGV 334 (476)
T ss_dssp EEESSSEEEEEEESEEEECSCEEECCTTCCS-SCCSCCBCTTSCBCCC-TTSBCSSTTEEECGGGSSSCCCHHHHHHHHH
T ss_pred EEEeCCCcEEEECCEEEEeeCCcccCCCCCc-cccCccccCCCCEeeC-CCcccCCCCEEEEEccCCCcccHHHHHHHHH
Confidence 66654 68999999999999999976534 44676 7888999999 567789999999999997654 8999999
Q ss_pred HHHHHhhhcc
Q 035902 367 NIANDINLAL 376 (381)
Q Consensus 367 ~~a~~i~~~l 376 (381)
.+|++|.+..
T Consensus 335 ~aa~~i~g~~ 344 (476)
T 3lad_A 335 VVAERIAGHK 344 (476)
T ss_dssp HHHHHHHHCC
T ss_pred HHHHHhcCCC
Confidence 9999998754
No 57
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=100.00 E-value=2.7e-34 Score=272.93 Aligned_cols=307 Identities=14% Similarity=0.154 Sum_probs=206.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHh-CCCCeEEEe--------cCCCCCCCcCC-CCCCCeeeecCCc----ccccCCCCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNN-LSVPNIILE--------REDCSASLWKK-RAYDRMKLHLAKQ----FCELPHMPF 66 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~-~g~~v~lie--------~~~~~g~~~~~-~~~~~~~~~~~~~----~~~~~~~~~ 66 (381)
|.++||+|||||++|+++|+.|++ .|.+|+||| +...+||.|.. .+++...+..... ......+.+
T Consensus 1 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~ 80 (490)
T 1fec_A 1 SRAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGW 80 (490)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred CccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCc
Confidence 456999999999999999999999 999999999 35567776532 1111100000000 000000000
Q ss_pred CCCCC-CCCCHHHHH-----------HHHHHHHHHh-CCccccccEEEEEEEeCCCCeEEEEEeec--CCCc-eEEEEeC
Q 035902 67 PSRTP-TFVPRISFI-----------NYVDNYVSQM-GINPRYHRSVESASYDENAKAWIIVAKNT--ALDA-YEEYVAR 130 (381)
Q Consensus 67 ~~~~~-~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~~v~~~~~--~~~~-~~~~~~d 130 (381)
..... ......++. ..+...+++. +++++.++ +..++ . +. +.+.+. ..++ ...+.||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~-~~~i~--~--~~--v~v~~~~~~~g~~~~~~~~d 153 (490)
T 1fec_A 81 ELDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGF-GALQD--N--HT--VLVRESADPNSAVLETLDTE 153 (490)
T ss_dssp ECCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESE-EEEEE--T--TE--EEEESSSSTTSCEEEEEEEE
T ss_pred ccCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeE-EEEee--C--CE--EEEEeeccCCCCceEEEEcC
Confidence 00000 001112222 2334445566 77776664 44443 2 34 444310 0111 1579999
Q ss_pred EEEEccCCCCCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhC---CCeeEEEEecCcceec
Q 035902 131 YLVVATGENGLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSC---GACTSIVVRGPVHVLT 207 (381)
Q Consensus 131 ~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~---g~~v~~i~r~~~~~~p 207 (381)
+||+|||+.|..|+++|.+. +.+..++.... ..+++++|||+|.+|+|+|..+.+. |.+|+++.|.+ .++|
T Consensus 154 ~lviAtGs~p~~p~i~g~~~----~~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~-~~l~ 227 (490)
T 1fec_A 154 YILLATGSWPQHLGIEGDDL----CITSNEAFYLD-EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGD-MILR 227 (490)
T ss_dssp EEEECCCEEECCCCSBTGGG----CBCHHHHTTCS-SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSS-SSST
T ss_pred EEEEeCCCCCCCCCCCCccc----eecHHHHhhhh-hcCCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCC-Cccc
Confidence 99999999999888888642 23333333322 2579999999999999999999999 99999999998 6777
Q ss_pred hhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--c
Q 035902 208 REIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--I 285 (381)
Q Consensus 208 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v 285 (381)
..+.++...+ .+.+++.+|+++.+ |
T Consensus 228 ~~d~~~~~~l-----------------------------------------------------~~~l~~~GV~i~~~~~v 254 (490)
T 1fec_A 228 GFDSELRKQL-----------------------------------------------------TEQLRANGINVRTHENP 254 (490)
T ss_dssp TSCHHHHHHH-----------------------------------------------------HHHHHHTTEEEEETCCE
T ss_pred ccCHHHHHHH-----------------------------------------------------HHHHHhCCCEEEeCCEE
Confidence 6554443333 33446678888877 7
Q ss_pred ceEeCC-----eEEEcCCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc
Q 035902 286 TSINRN-----EVEFENGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH 359 (381)
Q Consensus 286 ~~v~~~-----~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~ 359 (381)
+++..+ .+.+++|+++++|.||+|+|++|+++.+.. +..++ ++++|++.+| +.++++.|+|||+|||.+.+.
T Consensus 255 ~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~~~L~l-~~~gl~~~~~G~I~Vd-~~~~t~~~~IyA~GD~~~~~~ 332 (490)
T 1fec_A 255 AKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRSQTLQL-EKAGVEVAKNGAIKVD-AYSKTNVDNIYAIGDVTDRVM 332 (490)
T ss_dssp EEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSCG-GGGTCCBCTTSCBCCC-TTCBCSSTTEEECGGGGCSCC
T ss_pred EEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCccccCc-hhcCccCCCCCCEEEC-CCCccCCCCEEEEeccCCCcc
Confidence 777643 466788889999999999999999864422 33666 7778999999 567789999999999998644
Q ss_pred ---CccHHHHHHHHHhhhc
Q 035902 360 ---GISIDAKNIANDINLA 375 (381)
Q Consensus 360 ---~a~~~a~~~a~~i~~~ 375 (381)
.|..||+.+|++|.+.
T Consensus 333 l~~~A~~~g~~aa~~i~g~ 351 (490)
T 1fec_A 333 LTPVAINEGAAFVDTVFAN 351 (490)
T ss_dssp CHHHHHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHhcCC
Confidence 8899999999999863
No 58
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=2.3e-34 Score=267.74 Aligned_cols=284 Identities=16% Similarity=0.165 Sum_probs=201.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCC--eEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHH
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVP--NIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRIS 78 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~--v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (381)
|+ ++|+|||||+||+++|..|+++|.+ |+|||+++..+.. .... +..+.... .. +..+ ...
T Consensus 1 M~-~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~--~~~l-------~~~~~~g~-~~-~~~~--~~~--- 63 (410)
T 3ef6_A 1 MA-THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD--RPSL-------SKAVLDGS-LE-RPPI--LAE--- 63 (410)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC--SGGG-------GTHHHHTS-SS-SCCB--SSC---
T ss_pred CC-CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC--Cccc-------cHHHhCCC-CC-HHHh--cCC---
Confidence 63 6899999999999999999999987 9999998865421 0000 00000000 00 0010 011
Q ss_pred HHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeec
Q 035902 79 FINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHS 158 (381)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~ 158 (381)
.+.+++.+++++++++|..++... .. |.+.++ +.+.||+||+|||+.|..|++||.+. . .+++.
T Consensus 64 -----~~~~~~~~i~~~~~~~v~~id~~~--~~--v~~~~g-----~~~~~d~lvlAtG~~p~~~~ipG~~~-~-~v~~~ 127 (410)
T 3ef6_A 64 -----ADWYGEARIDMLTGPEVTALDVQT--RT--ISLDDG-----TTLSADAIVIATGSRARTMALPGSQL-P-GVVTL 127 (410)
T ss_dssp -----TTHHHHTTCEEEESCCEEEEETTT--TE--EEETTS-----CEEECSEEEECCCEEECCCCCTTTTS-T-TEECC
T ss_pred -----HHHHHHCCCEEEeCCEEEEEECCC--CE--EEECCC-----CEEECCEEEEccCCcccCCCCCCccc-c-ceEEe
Confidence 123445689999999999998754 33 777766 67999999999999999999998753 2 23322
Q ss_pred CCCCCC-----CCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech-hhHHHHHHHHhhCcHHHHHHHHHH
Q 035902 159 SKYENG-----GKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR-EIVFAGMLLLKFLPCKLVDFIVVM 232 (381)
Q Consensus 159 ~~~~~~-----~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~-~~~~~~~~~~~~l~~~~~~~~~~~ 232 (381)
....+. ....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++++ .+.++...+
T Consensus 128 ~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~~~~~~~~~~l--------------- 191 (410)
T 3ef6_A 128 RTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD-ELLVRVLGRRIGAWL--------------- 191 (410)
T ss_dssp CSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSHHHHCHHHHHHH---------------
T ss_pred ccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-ccchhhcCHHHHHHH---------------
Confidence 221111 11248999999999999999999999999999999998 55543 222222222
Q ss_pred HhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eEEEcCCcEeeccEE
Q 035902 233 LSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EVEFENGKIEEFEAI 306 (381)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v~~~~g~~~~~D~v 306 (381)
.+.+++.+|+++.+ |+++..+ .+.+++|+++++|.|
T Consensus 192 --------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~V 233 (410)
T 3ef6_A 192 --------------------------------------RGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSA 233 (410)
T ss_dssp --------------------------------------HHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEE
T ss_pred --------------------------------------HHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEE
Confidence 34446678888877 8888765 588899999999999
Q ss_pred EEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc------------cCccHHHHHHHHHhhh
Q 035902 307 IFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL------------HGISIDAKNIANDINL 374 (381)
Q Consensus 307 i~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~------------~~a~~~a~~~a~~i~~ 374 (381)
|+|+|++|+++. +. . .++-..+| +.+| +.++++.|+||++|||+..+ ..|..||+.+|++|.+
T Consensus 234 v~a~G~~p~~~l-~~-~-~gl~~~~g-i~vd-~~~~t~~~~IyA~GD~a~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 308 (410)
T 3ef6_A 234 LICVGAEPADQL-AR-Q-AGLACDRG-VIVD-HCGATLAKGVFAVGDVASWPLRAGGRRSLETYMNAQRQAAAVAAAILG 308 (410)
T ss_dssp EECSCEEECCHH-HH-H-TTCCBSSS-EECC-TTSBCSSTTEEECGGGEEEEBTTSSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred EEeeCCeecHHH-HH-h-CCCccCCe-EEEc-cCeeECCCCEEEEEcceeccCCCCCeeeechHHHHHHHHHHHHHHHcC
Confidence 999999999854 33 3 56532355 7887 56678999999999997643 3789999999999987
Q ss_pred cc
Q 035902 375 AL 376 (381)
Q Consensus 375 ~l 376 (381)
.-
T Consensus 309 ~~ 310 (410)
T 3ef6_A 309 KN 310 (410)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 59
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=100.00 E-value=2e-34 Score=273.89 Aligned_cols=298 Identities=15% Similarity=0.159 Sum_probs=204.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC-CCCCCeee-e---cCCcccccCCCCCCCCCCCCCCHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK-RAYDRMKL-H---LAKQFCELPHMPFPSRTPTFVPRI 77 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~ 77 (381)
++||+|||||++|+++|+.|++.|.+|+|||+ ..+||.|.. .+++...+ . ....+.....+.+....+ .....
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~-~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADP-IFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCC-EECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCC-ccCHH
Confidence 58999999999999999999999999999999 567775532 11110000 0 000000000110000001 11111
Q ss_pred -----------HHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEe-ecCCCceEEEEeCEEEEccCCCCC-CCC
Q 035902 78 -----------SFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAK-NTALDAYEEYVARYLVVATGENGL-IPE 144 (381)
Q Consensus 78 -----------~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~d~vIlAtG~~~~-~~~ 144 (381)
.+...+...+++.++++..+ .+..++ . .. +.+. ++ ..+.||+||+|||+.|. .|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-~~~~i~--~--~~--v~v~~~~-----~~~~~d~lviAtG~~p~~~p~ 171 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHIYES-RAVFVD--E--HT--LELSVTG-----ERISAEKILIATGAKIVSNSA 171 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEES-CEEEEE--T--TE--EEETTTC-----CEEEEEEEEECCCEEECCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEe-EEEEee--C--CE--EEEecCC-----eEEEeCEEEEccCCCcccCCC
Confidence 23334455556667776555 343333 2 33 5553 33 57999999999999998 888
Q ss_pred CCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHH
Q 035902 145 VPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCK 224 (381)
Q Consensus 145 ~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~ 224 (381)
++|.+. +.+..++.... ..+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++..+.++...+
T Consensus 172 i~G~~~----~~~~~~~~~~~-~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~~~~~~l------- 238 (484)
T 3o0h_A 172 IKGSDL----CLTSNEIFDLE-KLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD-LILRNFDYDLRQLL------- 238 (484)
T ss_dssp CBTGGG----SBCTTTGGGCS-SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHHHHHHH-------
T ss_pred CCCccc----cccHHHHHhHH-hcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC-ccccccCHHHHHHH-------
Confidence 888652 23444433333 358999999999999999999999999999999998 66666554443333
Q ss_pred HHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eEEEcCC
Q 035902 225 LVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EVEFENG 298 (381)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v~~~~g 298 (381)
.+.+++.+++++.+ |+++..+ .+.+++|
T Consensus 239 ----------------------------------------------~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g 272 (484)
T 3o0h_A 239 ----------------------------------------------NDAMVAKGISIIYEATVSQVQSTENCYNVVLTNG 272 (484)
T ss_dssp ----------------------------------------------HHHHHHHTCEEESSCCEEEEEECSSSEEEEETTS
T ss_pred ----------------------------------------------HHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCC
Confidence 33445567888876 7777654 4778899
Q ss_pred cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHHhhh
Q 035902 299 KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIANDINL 374 (381)
Q Consensus 299 ~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~i~~ 374 (381)
+++++|.||+|+|++|++..+.. +..++ ++++|++.+| +..+++.|||||+|||.+.+. .|..||+.+|++|.+
T Consensus 273 ~~i~aD~Vi~A~G~~p~~~~l~l-~~~g~~~~~~G~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~i~~ 350 (484)
T 3o0h_A 273 QTICADRVMLATGRVPNTTGLGL-ERAGVKVNEFGAVVVD-EKMTTNVSHIWAVGDVTGHIQLTPVAIHDAMCFVKNAFE 350 (484)
T ss_dssp CEEEESEEEECCCEEECCTTCCH-HHHTCCBCTTSCBCCC-TTSBCSSTTEEECGGGGTSCCCHHHHHHHHHHHHHHHHC
T ss_pred cEEEcCEEEEeeCCCcCCCCCCh-hhcCceECCCCCEeEC-CCCCCCCCCEEEEEecCCCCcCHHHHHHHHHHHHHHHcC
Confidence 99999999999999999865422 22566 7888999999 567789999999999998654 889999999999987
Q ss_pred c
Q 035902 375 A 375 (381)
Q Consensus 375 ~ 375 (381)
.
T Consensus 351 ~ 351 (484)
T 3o0h_A 351 N 351 (484)
T ss_dssp -
T ss_pred C
Confidence 4
No 60
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=100.00 E-value=2.9e-34 Score=270.80 Aligned_cols=301 Identities=17% Similarity=0.180 Sum_probs=205.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC-CCCCe-eeecCC---cccccCCCCCCCCCCCCCCHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR-AYDRM-KLHLAK---QFCELPHMPFPSRTPTFVPRI 77 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~-~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 77 (381)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|... +.+.. ...... .... ..+..+.. ....+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~-~~~~~~~ 78 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVK-GVELDLP 78 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEEC-CEEECHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccC-CCccCHH
Confidence 3799999999999999999999999999999998888865431 11100 000000 0000 00000000 0001112
Q ss_pred H-----------HHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCC
Q 035902 78 S-----------FINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVP 146 (381)
Q Consensus 78 ~-----------~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~ 146 (381)
. +...+.+.+++.+++++.++.+. .+ .+.+.|.+ ++ ..+.||+||+|||+.|..|+++
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~---i~--~~~~~v~~-~g-----~~~~~d~lviAtG~~p~~~~~~ 147 (455)
T 2yqu_A 79 ALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARF---LS--ERKVLVEE-TG-----EELEARYILIATGSAPLIPPWA 147 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---SS--SSEEEETT-TC-----CEEEEEEEEECCCEEECCCTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ec--CCeEEEee-CC-----EEEEecEEEECCCCCCCCCCCC
Confidence 2 22223455666788887766432 22 24444433 33 5799999999999999888888
Q ss_pred CCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHH
Q 035902 147 GLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLV 226 (381)
Q Consensus 147 g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~ 226 (381)
|.+.. .++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+.++...+.
T Consensus 148 g~~~~--~v~~~~~~~~~~~-~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~-~~l~~~~~~~~~~l~-------- 215 (455)
T 2yqu_A 148 QVDYE--RVVTSTEALSFPE-VPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD-RILPTMDLEVSRAAE-------- 215 (455)
T ss_dssp CCCSS--SEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHHHHHHH--------
T ss_pred CCCcC--cEechHHhhcccc-CCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC-ccccccCHHHHHHHH--------
Confidence 76531 2455554443333 57999999999999999999999999999999998 667765544443332
Q ss_pred HHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC--e--EEEcCCcE
Q 035902 227 DFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN--E--VEFENGKI 300 (381)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~--~--v~~~~g~~ 300 (381)
+.+++.+++++.+ |++++.+ . +.+++|++
T Consensus 216 ---------------------------------------------~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~ 250 (455)
T 2yqu_A 216 ---------------------------------------------RVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEV 250 (455)
T ss_dssp ---------------------------------------------HHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCE
T ss_pred ---------------------------------------------HHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeE
Confidence 3334557778776 7777642 3 44568889
Q ss_pred eeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHHhhhc
Q 035902 301 EEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIANDINLA 375 (381)
Q Consensus 301 ~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~i~~~ 375 (381)
+++|.||+|+|.+|+.+.+.. +..++ ++++|++.+| +.++++.|+||++|||.+.+. .|..||+.+|++|.+.
T Consensus 251 i~~D~vv~A~G~~p~~~~l~~-~~~g~~~~~~g~i~vd-~~~~t~~~~iya~GD~~~~~~~~~~A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 251 LEADRVLVAVGRRPYTEGLSL-ENAGLSTDERGRIPVD-EHLRTRVPHIYAIGDVVRGPMLAHKASEEGIAAVEHMVRG 327 (455)
T ss_dssp EEESEEEECSCEEECCTTCCG-GGGTCCCCTTSCCCCC-TTSBCSSTTEEECGGGSSSCCCHHHHHHHHHHHHHHHHHS
T ss_pred EEcCEEEECcCCCcCCCCCCh-hhcCCccCCCCcEeEC-CCcccCCCCEEEEecCCCCccCHHHHHHhHHHHHHHHcCC
Confidence 999999999999999865322 33566 5678999998 456788999999999988755 7899999999999873
No 61
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.6e-34 Score=268.10 Aligned_cols=284 Identities=18% Similarity=0.174 Sum_probs=202.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCC--eEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVP--NIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~--v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
++||+|||||++|+++|..|+++|.+ |+|||+++..+.. .. . .+..+ . .......++.
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~--~~-----~--l~~~~-----~------~~~~~~~~~~ 68 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE--RP-----P--LSKEY-----L------AREKTFERIC 68 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC--SG-----G--GGTTT-----T------TTSSCSGGGB
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcC--cc-----c--CCHHH-----H------cCCCCHHHhc
Confidence 47999999999999999999999986 9999998755421 00 0 00000 0 0001111222
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCC
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSK 160 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~ 160 (381)
....+.+++.+++++.++++..++... .. |.+.++ ..+.||+||+|||+.|..|+++|.+. .+ +.....
T Consensus 69 ~~~~~~~~~~~i~~~~~~~v~~id~~~--~~--v~~~~g-----~~~~~d~lvlAtG~~~~~~~i~g~~~-~~-v~~~~~ 137 (415)
T 3lxd_A 69 IRPAQFWEDKAVEMKLGAEVVSLDPAA--HT--VKLGDG-----SAIEYGKLIWATGGDPRRLSCVGADL-AG-VHAVRT 137 (415)
T ss_dssp SSCHHHHHHTTEEEEETCCEEEEETTT--TE--EEETTS-----CEEEEEEEEECCCEECCCCBTTSSCC-BT-EECCCS
T ss_pred cCCHHHHHHCCcEEEeCCEEEEEECCC--CE--EEECCC-----CEEEeeEEEEccCCccCCCCCCCccc-cC-EEEEcC
Confidence 222344566789999999999997654 33 777665 68999999999999999998888653 21 222211
Q ss_pred CCCCC-----CCC-CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech-hhHHHHHHHHhhCcHHHHHHHHHHH
Q 035902 161 YENGG-----KFI-GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR-EIVFAGMLLLKFLPCKLVDFIVVML 233 (381)
Q Consensus 161 ~~~~~-----~~~-~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~-~~~~~~~~~~~~l~~~~~~~~~~~~ 233 (381)
..+.. ... +++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++++ ....+...
T Consensus 138 ~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~l~~~~~~~~~~~----------------- 199 (415)
T 3lxd_A 138 KEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP-RVLARVAGEALSEF----------------- 199 (415)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTSCHHHHHH-----------------
T ss_pred HHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC-chhhhhcCHHHHHH-----------------
Confidence 11100 113 8999999999999999999999999999999998 55443 22222222
Q ss_pred hhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC-----eEEEcCCcEeeccEE
Q 035902 234 SKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN-----EVEFENGKIEEFEAI 306 (381)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~-----~v~~~~g~~~~~D~v 306 (381)
+.+.+++.+++++.+ |+++..+ .+.+.+|+++++|.|
T Consensus 200 ------------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~V 243 (415)
T 3lxd_A 200 ------------------------------------YQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIV 243 (415)
T ss_dssp ------------------------------------HHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEE
T ss_pred ------------------------------------HHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEE
Confidence 244456678888876 8888653 478889999999999
Q ss_pred EEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc--------------cCccHHHHHHHHHh
Q 035902 307 IFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL--------------HGISIDAKNIANDI 372 (381)
Q Consensus 307 i~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~--------------~~a~~~a~~~a~~i 372 (381)
|+|+|++|+++. +. . .++-..+| +.+| +..+++.|||||+|||+..+ ..|..||+.+|++|
T Consensus 244 v~a~G~~p~~~l-~~-~-~gl~~~~g-i~vd-~~~~t~~~~iyA~GD~a~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i 318 (415)
T 3lxd_A 244 IVGIGIVPCVGA-LI-S-AGASGGNG-VDVD-EFCRTSLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDI 318 (415)
T ss_dssp EECSCCEESCHH-HH-H-TTCCCSSS-EECC-TTCBCSSTTEEECGGGEEEECGGGTTCEECCCSHHHHHHHHHHHHHHH
T ss_pred EECCCCccChHH-HH-h-CCCCcCCC-EEEC-CCCCcCCCCEEEEEeeeeecCcccCCcceeechHHHHHHHHHHHHHHh
Confidence 999999999864 33 3 56633356 8888 56678999999999997643 26889999999999
Q ss_pred hhcc
Q 035902 373 NLAL 376 (381)
Q Consensus 373 ~~~l 376 (381)
.+.-
T Consensus 319 ~g~~ 322 (415)
T 3lxd_A 319 CGAP 322 (415)
T ss_dssp TTCC
T ss_pred cCCC
Confidence 8754
No 62
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=100.00 E-value=2e-35 Score=280.82 Aligned_cols=300 Identities=16% Similarity=0.165 Sum_probs=198.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC-CCCCCeee-ecCC---cccccCCCCCCCCCCCCCCHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK-RAYDRMKL-HLAK---QFCELPHMPFPSRTPTFVPRIS 78 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~ 78 (381)
+||+||||||||+++|..|++.|.+|+|||++. +||.+.+ .+.+...+ .... ....++.+.++.. ....+..+
T Consensus 9 ~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~~ 86 (492)
T 3ic9_A 9 VDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD-RISVNGKA 86 (492)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS-EEEECHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC-CCccCHHH
Confidence 899999999999999999999999999999975 7775421 11111000 0000 0000011100000 01123445
Q ss_pred HHHHHHHHHHHhCCcc-----------ccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCC
Q 035902 79 FINYVDNYVSQMGINP-----------RYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPG 147 (381)
Q Consensus 79 ~~~~~~~~~~~~~~~~-----------~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g 147 (381)
+.+++.+..+++...+ .+..... ..+ .+.|.+.++ ..+.||+||+|||+.|..|++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~---~~~---~~~v~~~~~-----~~~~~d~lViATGs~p~~p~~~~ 155 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFDEQDKIRGFAK---FLD---EHTLQVDDH-----SQVIAKRIVIATGSRPNYPEFLA 155 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEE---EEE---TTEEEETTT-----EEEEEEEEEECCCEECCCCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEE---Eec---CCEEEEcCC-----cEEEeCEEEEccCCCCcCCCCCC
Confidence 5555444333321110 0111111 111 123666544 78999999999999999887655
Q ss_pred CCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHH
Q 035902 148 LGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVD 227 (381)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~ 227 (381)
.. ...++++.+.... ...+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+.++...+.+
T Consensus 156 ~~--~~~v~t~~~~~~~-~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~~~~l~~-------- 223 (492)
T 3ic9_A 156 AA--GSRLLTNDNLFEL-NDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG-SVANLQDEEMKRYAEK-------- 223 (492)
T ss_dssp TT--GGGEECHHHHTTC-SSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT-CCTTCCCHHHHHHHHH--------
T ss_pred cc--CCcEEcHHHHhhh-hhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cccccCCHHHHHHHHH--------
Confidence 33 1234444444333 3358999999999999999999999999999999998 6667665554444333
Q ss_pred HHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC--e--EEEc--CC-
Q 035902 228 FIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN--E--VEFE--NG- 298 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~--~--v~~~--~g- 298 (381)
.+++. |+++.+ ++++..+ + +.+. +|
T Consensus 224 ---------------------------------------------~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~ 257 (492)
T 3ic9_A 224 ---------------------------------------------TFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQ 257 (492)
T ss_dssp ---------------------------------------------HHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCC
T ss_pred ---------------------------------------------HHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCc
Confidence 33445 777776 7777543 3 4444 67
Q ss_pred -cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHHhh
Q 035902 299 -KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIANDIN 373 (381)
Q Consensus 299 -~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~i~ 373 (381)
+++++|.|++|+|++|+++.+.. +..++ ++++|++.+|.+.++++.|+|||+|||.+.+. .|..||+.+|++|.
T Consensus 258 ~~~i~~D~Vi~a~G~~p~~~~l~l-~~~gl~~~~~G~i~vd~~~~~t~~~~IyA~GD~~~~~~~~~~A~~~g~~aa~~i~ 336 (492)
T 3ic9_A 258 KTTESFQYVLAATGRKANVDKLGL-ENTSIELDKKNSPLFDELTLQTSVDHIFVAGDANNTLTLLHEAADDGKVAGTNAG 336 (492)
T ss_dssp EEEEEESEEEECSCCEESCSSSCG-GGSCCCBCTTCCBCCCTTTCBCSSTTEEECGGGGTSSCSHHHHHHHHHHHHHHHH
T ss_pred eEEEECCEEEEeeCCccCCCCCCh-hhcCCEECCCCCEeECcccccCCCCCEEEEEecCCCCccHHHHHHHHHHHHHHHc
Confidence 68999999999999999965422 33676 78899999984567789999999999988755 88999999999998
Q ss_pred hc
Q 035902 374 LA 375 (381)
Q Consensus 374 ~~ 375 (381)
+.
T Consensus 337 ~~ 338 (492)
T 3ic9_A 337 AY 338 (492)
T ss_dssp HT
T ss_pred CC
Confidence 73
No 63
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=8.8e-34 Score=263.50 Aligned_cols=280 Identities=15% Similarity=0.143 Sum_probs=200.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV--PNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
++||+|||||++|+++|..|++.|. +|+|||++++++. ..... +..+..-.. + .. .
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~--~~~~~-------~~~~~~~~~-~--~~---~------- 64 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPY--DRPPL-------SKDFMAHGD-A--EK---I------- 64 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCB--CSGGG-------GTHHHHHCC-G--GG---S-------
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcc--cCCCC-------CHHHhCCCc-h--hh---h-------
Confidence 4899999999999999999999988 5999999876541 11000 000000000 0 00 0
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCC-CCCCCCCcceeecC
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEV-PGLGSFEGEYMHSS 159 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~-~g~~~~~~~~~~~~ 159 (381)
+++ .+++++++++++++|..++.+. . .|.+.++ ..+.||+||+|||+.|..|++ +|.+ .+ +++..
T Consensus 65 -~~~-~~~~~~v~~~~~~~v~~i~~~~--~--~v~~~~g-----~~~~~d~lviAtG~~~~~~~i~~G~~--~~-v~~~~ 130 (408)
T 2gqw_A 65 -RLD-CKRAPEVEWLLGVTAQSFDPQA--H--TVALSDG-----RTLPYGTLVLATGAAPRALPTLQGAT--MP-VHTLR 130 (408)
T ss_dssp -BCC-CTTSCSCEEEETCCEEEEETTT--T--EEEETTS-----CEEECSEEEECCCEEECCCGGGTTCS--SC-EEECC
T ss_pred -hHH-HHHHCCCEEEcCCEEEEEECCC--C--EEEECCC-----CEEECCEEEECCCCCCCCCCccCCCC--Cc-EEEEC
Confidence 000 2345688888998899887643 3 4777665 579999999999999998888 8875 22 33322
Q ss_pred CCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech-hhHHHHHHHHhhCcHHHHHHHHHHH
Q 035902 160 KYEN-----GGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR-EIVFAGMLLLKFLPCKLVDFIVVML 233 (381)
Q Consensus 160 ~~~~-----~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~-~~~~~~~~~~~~l~~~~~~~~~~~~ 233 (381)
...+ .....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .++|+ .+.++...+
T Consensus 131 ~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~l---------------- 193 (408)
T 2gqw_A 131 TLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP-RLMSRAAPATLADFV---------------- 193 (408)
T ss_dssp SHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTSCHHHHHHH----------------
T ss_pred CHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-cccccccCHHHHHHH----------------
Confidence 2111 111247999999999999999999999999999999998 66653 333322222
Q ss_pred hhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCeEEEcCCcEeeccEEEEecC
Q 035902 234 SKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNEVEFENGKIEEFEAIIFATG 311 (381)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~v~~~~g~~~~~D~vi~a~G 311 (381)
.+.+++.+|+++.+ +++++++.+.+++|+++++|.||+|+|
T Consensus 194 -------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G 236 (408)
T 2gqw_A 194 -------------------------------------ARYHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIG 236 (408)
T ss_dssp -------------------------------------HHHHHHTTCEEEESCCEEEEETTEEEETTSCEEECSEEEECSC
T ss_pred -------------------------------------HHHHHHcCcEEEeCCEEEEEECCEEEECCCCEEEcCEEEECcC
Confidence 34446678888887 888875578889999999999999999
Q ss_pred CCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc-------------cCccHHHHHHHHHhhhccc
Q 035902 312 YKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-------------HGISIDAKNIANDINLALT 377 (381)
Q Consensus 312 ~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-------------~~a~~~a~~~a~~i~~~l~ 377 (381)
++|+++ ++. . .++-..+| +.+| +.++++.|+|||+|||+..+ ..|..||+.+|++|.+...
T Consensus 237 ~~p~~~-l~~-~-~gl~~~~g-i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~~~ 310 (408)
T 2gqw_A 237 VLANDA-LAR-A-AGLACDDG-IFVD-AYGRTTCPDVYALGDVTRQRNPLSGRFERIETWSNAQNQGIAVARHLVDPTA 310 (408)
T ss_dssp EEECCH-HHH-H-HTCCBSSS-EECC-TTCBCSSTTEEECGGGEEEEETTTTEEECCCCHHHHHHHHHHHHHHHHCTTS
T ss_pred CCccHH-HHH-h-CCCCCCCC-EEEC-CCCccCCCCEEEEEEEEEecCccCCceeeccHHHHHHHHHHHHHHHhcCCCC
Confidence 999986 343 3 45522356 8888 56778999999999997653 1689999999999987543
No 64
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=100.00 E-value=8.2e-35 Score=276.82 Aligned_cols=308 Identities=13% Similarity=0.085 Sum_probs=200.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC--------CCCC-CcCCCCCCC-eeeec---------CCcccccCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED--------CSAS-LWKKRAYDR-MKLHL---------AKQFCELPHM 64 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~--------~~g~-~~~~~~~~~-~~~~~---------~~~~~~~~~~ 64 (381)
|||+||||||+|+.+|..+++.|.+|+|||+.. .+|| ..+..+.+. +.... ....+++..-
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~~ 122 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKFD 122 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcccC
Confidence 899999999999999999999999999999743 3555 222222211 00000 0000111000
Q ss_pred CCCCCCCCCCC-HHHH----HHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 65 PFPSRTPTFVP-RISF----INYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 65 ~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
....+|+.... ...+ ..-....+++.++++..+. ..-+ +. ....|...+ ...+.+.+++|++|||||++
T Consensus 123 ~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~-a~f~--~~--~~v~V~~~~-~~~~~~~i~a~~iiIATGs~ 196 (542)
T 4b1b_A 123 NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGL-AKLK--DK--NTVSYYLKG-DLSKEETVTGKYILIATGCR 196 (542)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEE-EEEE--ET--TEEEEEEC---CCCEEEEEEEEEEECCCEE
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeee-EEEc--CC--CcceEeecc-cCCceEEEeeeeEEeccCCC
Confidence 00001111111 1111 1122334455566654332 2111 11 333333322 12234789999999999999
Q ss_pred CCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHh
Q 035902 140 GLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLK 219 (381)
Q Consensus 140 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~ 219 (381)
|..|+.++... ..++++.+.....+ .|++++|||||++|+|+|..++++|.+||++.|. .++|.++.++...+.+
T Consensus 197 P~~P~~~~~~~--~~~~ts~~~l~l~~-lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~--~~L~~~D~ei~~~l~~ 271 (542)
T 4b1b_A 197 PHIPDDVEGAK--ELSITSDDIFSLKK-DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRS--IVLRGFDQQCAVKVKL 271 (542)
T ss_dssp ECCCSSSBTHH--HHCBCHHHHTTCSS-CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESS--CSSTTSCHHHHHHHHH
T ss_pred CCCCCcccCCC--ccccCchhhhcccc-CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccc--ccccccchhHHHHHHH
Confidence 99886443321 22455555555444 6899999999999999999999999999999874 5678888877766655
Q ss_pred hCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eE
Q 035902 220 FLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EV 293 (381)
Q Consensus 220 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v 293 (381)
.| ++.+++++.+ ++++... .+
T Consensus 272 ~l-----------------------------------------------------~~~gi~~~~~~~v~~~~~~~~~~~v 298 (542)
T 4b1b_A 272 YM-----------------------------------------------------EEQGVMFKNGILPKKLTKMDDKILV 298 (542)
T ss_dssp HH-----------------------------------------------------HHTTCEEEETCCEEEEEEETTEEEE
T ss_pred HH-----------------------------------------------------HhhcceeecceEEEEEEecCCeEEE
Confidence 44 5567777766 5555432 35
Q ss_pred EEcCCcEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccc-cc---CccHHHHHH
Q 035902 294 EFENGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTG-LH---GISIDAKNI 368 (381)
Q Consensus 294 ~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~-~~---~a~~~a~~~ 368 (381)
.+.++.++++|.|++|+|++||++.+.. +..++ ++..+.+++.+..++|+.|||||+|||+++ ++ .|..+|+.+
T Consensus 299 ~~~~~~~~~~D~vLvAvGR~Pnt~~L~l-e~~gv~~~~~~~~i~vd~~~~Ts~p~IyAiGDv~~~~p~La~~A~~eg~~a 377 (542)
T 4b1b_A 299 EFSDKTSELYDTVLYAIGRKGDIDGLNL-ESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEIL 377 (542)
T ss_dssp EETTSCEEEESEEEECSCEEESCGGGCG-GGTTCCEETTTTEECCCTTSBCSSTTEEECTTSBTTCCCCHHHHHHHHHHH
T ss_pred EEcCCCeEEEEEEEEcccccCCccccCc-ccceeeecccCceEeccccccccCCCeEEeccccCCchhHHHHHHHHHHHH
Confidence 6678889999999999999999976655 55676 666666644336778999999999999865 33 888999999
Q ss_pred HHHhhhcc
Q 035902 369 ANDINLAL 376 (381)
Q Consensus 369 a~~i~~~l 376 (381)
+++|.+.-
T Consensus 378 a~~i~g~~ 385 (542)
T 4b1b_A 378 ARRLFKDS 385 (542)
T ss_dssp HHHHHSCC
T ss_pred HHHHhcCC
Confidence 99998743
No 65
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=100.00 E-value=6e-34 Score=268.46 Aligned_cols=289 Identities=17% Similarity=0.202 Sum_probs=202.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
+||+|||||++|+++|..|++. |.+|+|||+++..+.... .+........ .. ....++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-----~~~~~~~g~~---~~----------~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC-----GIALYLGKEI---KN----------NDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG-----GHHHHHTTCB---GG----------GCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc-----cchhhhcCCc---cc----------CCHHHhhh
Confidence 5899999999999999999998 999999999875442100 0000000000 00 00011111
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCC
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
.+.+.++++++++++++++..++.+. +. +.+.+...++...++||+||+|||+.|..|+++|.+. . .+++...+
T Consensus 63 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~--v~v~~~~~g~~~~~~~d~lviAtGs~p~~p~i~g~~~-~-~v~~~~~~ 136 (452)
T 2cdu_A 63 SSPEELSNLGANVQMRHQVTNVDPET--KT--IKVKDLITNEEKTEAYDKLIMTTGSKPTVPPIPGIDS-S-RVYLCKNY 136 (452)
T ss_dssp CCHHHHHHTTCEEEESEEEEEEEGGG--TE--EEEEETTTCCEEEEECSEEEECCCEEECCCCCTTTTS-T-TEEECSSH
T ss_pred cCHHHHHHcCCEEEeCCEEEEEEcCC--CE--EEEEecCCCceEEEECCEEEEccCCCcCCCCCCCCCC-C-CEEEeCcH
Confidence 22334556789988999999988765 55 4444311122367999999999999999999998753 2 24443322
Q ss_pred CCCC-----CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceec-hhhHHHHHHHHhhCcHHHHHHHHHHHhh
Q 035902 162 ENGG-----KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLT-REIVFAGMLLLKFLPCKLVDFIVVMLSK 235 (381)
Q Consensus 162 ~~~~-----~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p-~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 235 (381)
.+.. ...+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++| ..+.++...+
T Consensus 137 ~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~l------------------ 197 (452)
T 2cdu_A 137 NDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE-RVLYKYFDKEFTDIL------------------ 197 (452)
T ss_dssp HHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS-STTTTTSCHHHHHHH------------------
T ss_pred HHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC-chhhhhhhhhHHHHH------------------
Confidence 2111 1258999999999999999999999999999999998 6666 3333333222
Q ss_pred hhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC--CeE--EEcCCcEeeccEEEEe
Q 035902 236 MKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR--NEV--EFENGKIEEFEAIIFA 309 (381)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~--~~v--~~~~g~~~~~D~vi~a 309 (381)
.+.+++.+++++.+ |+++.. +.+ ...+|+++++|.||+|
T Consensus 198 -----------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a 242 (452)
T 2cdu_A 198 -----------------------------------AKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILC 242 (452)
T ss_dssp -----------------------------------HHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEEC
T ss_pred -----------------------------------HHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEEC
Confidence 34446678888877 777764 333 2347889999999999
Q ss_pred cCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccccc-------------cCccHHHHHHHHHhhhc
Q 035902 310 TGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-------------HGISIDAKNIANDINLA 375 (381)
Q Consensus 310 ~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-------------~~a~~~a~~~a~~i~~~ 375 (381)
+|++|+++ ++. . . + ++++|++.+| +.++++.|||||+|||+... ..|..||+.+|++|.+.
T Consensus 243 ~G~~p~~~-ll~-~-~-l~~~~~G~i~Vd-~~~~t~~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~~g~~aa~~i~g~ 317 (452)
T 2cdu_A 243 IGFRPNTE-LLK-G-K-VAMLDNGAIITD-EYMHSSNRDIFAAGDSAAVHYNPTNSNAYIPLATNAVRQGRLVGLNLTED 317 (452)
T ss_dssp CCEEECCG-GGT-T-T-SCBCTTSCBCCC-TTSBCSSTTEEECSTTBCEEETTTTEEECCCCHHHHHHHHHHHHHTSSSC
T ss_pred cCCCCCHH-HHH-H-h-hhcCCCCCEEEC-CCcCcCCCCEEEcceEEEeccccCCCeeecchHHHHHHHHHHHHHHhCCC
Confidence 99999986 444 3 4 4 6788999999 56778999999999998731 27899999999999864
No 66
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=3.9e-33 Score=262.99 Aligned_cols=297 Identities=15% Similarity=0.197 Sum_probs=202.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC-CCCCCee-eecC---CcccccCC---CCCCCCCCCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK-RAYDRMK-LHLA---KQFCELPH---MPFPSRTPTF 73 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~-~~~~~~~-~~~~---~~~~~~~~---~~~~~~~~~~ 73 (381)
.++||+|||||+||+++|..|++.|.+|+|||+ +.+||.|.. .+.+... .... ..+..+.. +..+.. ...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~ 81 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA-SPR 81 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC-CCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC-CCc
Confidence 358999999999999999999999999999999 678876642 1111100 0000 00000000 111000 111
Q ss_pred CCHHHHHH-----------HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 74 VPRISFIN-----------YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 74 ~~~~~~~~-----------~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+..++.. .+.+.+++.+++++.++.+. + +. .. |.+.+ ..+.||+||+|||+.|..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~-~--~~--~~--v~v~~------~~~~~d~lviATGs~p~~ 148 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKV-L--DG--KQ--VEVDG------QRIQCEHLLLATGSSSVE 148 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEE-E--ET--TE--EEETT------EEEECSEEEECCCEEECC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEE-c--cC--CE--EEEee------EEEEeCEEEEeCCCCCCC
Confidence 22233322 23455667788888776543 2 22 33 55543 579999999999999876
Q ss_pred CC-CCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhC
Q 035902 143 PE-VPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFL 221 (381)
Q Consensus 143 ~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l 221 (381)
|+ ++ .+ +.++++.+...... .+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|..+.++...+
T Consensus 149 ~~~~~-~~---~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l---- 218 (458)
T 1lvl_A 149 LPMLP-LG---GPVISSTEALAPKA-LPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE-RILPTYDSELTAPV---- 218 (458)
T ss_dssp BTTBC-CB---TTEECHHHHTCCSS-CCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCHHHHHHH----
T ss_pred CCCCC-cc---CcEecHHHHhhhhc-cCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCHHHHHHH----
Confidence 65 44 22 23555555444333 57999999999999999999999999999999998 67675554443333
Q ss_pred cHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCeEEEc--C
Q 035902 222 PCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNEVEFE--N 297 (381)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~v~~~--~ 297 (381)
.+.+++.+|+++.+ +++++.+.+.+. +
T Consensus 219 -------------------------------------------------~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~ 249 (458)
T 1lvl_A 219 -------------------------------------------------AESLKKLGIALHLGHSVEGYENGCLLANDGK 249 (458)
T ss_dssp -------------------------------------------------HHHHHHHTCEEETTCEEEEEETTEEEEECSS
T ss_pred -------------------------------------------------HHHHHHCCCEEEECCEEEEEEeCCEEEEECC
Confidence 23345567888877 777776435444 5
Q ss_pred C--cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc---CccHHHHHHHHH
Q 035902 298 G--KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH---GISIDAKNIAND 371 (381)
Q Consensus 298 g--~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~---~a~~~a~~~a~~ 371 (381)
| +++++|.|++|+|++|+++.+.. +..++ ++++ ++.+| +.++++.|+||++|||...+. .|..||+.+|++
T Consensus 250 G~~~~i~~D~vv~a~G~~p~~~~l~~-~~~g~~~~~~-~i~vd-~~~~t~~~~Iya~GD~~~~~~~~~~A~~~g~~aa~~ 326 (458)
T 1lvl_A 250 GGQLRLEADRVLVAVGRRPRTKGFNL-ECLDLKMNGA-AIAID-ERCQTSMHNVWAIGDVAGEPMLAHRAMAQGEMVAEI 326 (458)
T ss_dssp SCCCEECCSCEEECCCEEECCSSSSG-GGSCCCEETT-EECCC-TTCBCSSTTEEECGGGGCSSCCHHHHHHHHHHHHHH
T ss_pred CceEEEECCEEEECcCCCcCCCCCCc-HhcCCcccCC-EEeEC-CCCcCCCCCEEEeeccCCCcccHHHHHHHHHHHHHH
Confidence 6 68999999999999999865422 33566 5555 78888 466788999999999988654 789999999999
Q ss_pred hhhc
Q 035902 372 INLA 375 (381)
Q Consensus 372 i~~~ 375 (381)
|.+.
T Consensus 327 i~g~ 330 (458)
T 1lvl_A 327 IAGK 330 (458)
T ss_dssp HTTC
T ss_pred hcCC
Confidence 9863
No 67
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=100.00 E-value=4.1e-34 Score=267.94 Aligned_cols=274 Identities=18% Similarity=0.208 Sum_probs=192.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.+||+||||||||+++|..|++.|++|+|||+.+.+||.|... + +.+....++.++
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------i---------p~~~~~~~~~~~ 177 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------I---------PGFKLEKSVVER 177 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------S---------CTTTSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------C---------CCccCCHHHHHH
Confidence 3789999999999999999999999999999999888865421 1 112222456677
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC-CCCCCCCCCCCCCcceeecCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN-GLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~-~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
..++++++++++++++.+. .. +.+++. .+.||+||+|||+. |..+.++|.+. .+ +++..++
T Consensus 178 ~~~~l~~~gv~~~~~~~v~--------~~--v~~~~~------~~~~d~vvlAtG~~~~~~~~ipG~~~-~g-v~~a~~~ 239 (456)
T 2vdc_G 178 RVKLLADAGVIYHPNFEVG--------RD--ASLPEL------RRKHVAVLVATGVYKARDIKAPGSGL-GN-IVAALDY 239 (456)
T ss_dssp HHHHHHHTTCEEETTCCBT--------TT--BCHHHH------HSSCSEEEECCCCCEECCTTCSCCTT-TT-EEEHHHH
T ss_pred HHHHHHHCCcEEEeCCEec--------cE--EEhhHh------HhhCCEEEEecCCCCCCCCCCCCCcC-CC-cEEHHHH
Confidence 7778888899988887652 11 333222 25699999999997 77788888652 33 3322110
Q ss_pred ---------CC--------CCCCCCCeEEEEcCCCCHHHHHHHHhhCCC-eeEEEEecCcceechhhHHHHHHHHhhCcH
Q 035902 162 ---------EN--------GGKFIGKNVLVVGCGNSGMEIAYDLSSCGA-CTSIVVRGPVHVLTREIVFAGMLLLKFLPC 223 (381)
Q Consensus 162 ---------~~--------~~~~~~~~v~viG~G~~~~e~a~~l~~~g~-~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~ 223 (381)
.. .....+++++|||+|.+|+|+|..+.+.|. +|++++|++...+|....++
T Consensus 240 l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~~e~---------- 309 (456)
T 2vdc_G 240 LTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQREV---------- 309 (456)
T ss_dssp HHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCHHHH----------
T ss_pred HHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCHHHH----------
Confidence 00 122468999999999999999999999987 59999998843344433211
Q ss_pred HHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCe----EE---
Q 035902 224 KLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNE----VE--- 294 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~----v~--- 294 (381)
+.+++.+++++.+ +.++.+++ +.
T Consensus 310 ------------------------------------------------~~~~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~ 341 (456)
T 2vdc_G 310 ------------------------------------------------AHAEEEGVEFIWQAAPEGFTGDTVVTGVRAVR 341 (456)
T ss_dssp ------------------------------------------------HHHHHTTCEEECCSSSCCEEEEEEEETTEEEE
T ss_pred ------------------------------------------------HHHHHCCCEEEeCCCceEEeCCCcEEEEEEEE
Confidence 1112223333332 22222110 11
Q ss_pred ---------------EcCC--cEeeccEEEEecCCCCCcch-hccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccc
Q 035902 295 ---------------FENG--KIEEFEAIIFATGYKSTVRN-WLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSR 355 (381)
Q Consensus 295 ---------------~~~g--~~~~~D~vi~a~G~~p~~~~-~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~ 355 (381)
..+| +++++|.||+|+|++|+... ++. . .++ ++++|++.+|...++|+.|+|||+||+.
T Consensus 342 ~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~-~-~gl~~~~~G~i~vd~~~~~Ts~~~VfA~GD~~ 419 (456)
T 2vdc_G 342 IHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFD-E-PELKVTRWGTLLVDHRTKMTNMDGVFAAGDIV 419 (456)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHH-S-TTSCBCTTSSBCCCTTTCBCSSTTEEECGGGG
T ss_pred EEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcc-c-CCeeECCCCCEEECCCCCcCCCCCEEEecccc
Confidence 1123 47899999999999998754 444 4 566 7889999999433678999999999998
Q ss_pred cccc---CccHHHHHHHHHhhhcccc
Q 035902 356 TGLH---GISIDAKNIANDINLALTD 378 (381)
Q Consensus 356 ~~~~---~a~~~a~~~a~~i~~~l~~ 378 (381)
.++. .|+.+|+.+|++|.+.|..
T Consensus 420 ~g~~~v~~A~~~G~~aA~~i~~~L~~ 445 (456)
T 2vdc_G 420 RGASLVVWAIRDGRDAAEGIHAYAKA 445 (456)
T ss_dssp SSCCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhc
Confidence 8765 8999999999999998853
No 68
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=100.00 E-value=2.1e-33 Score=264.42 Aligned_cols=286 Identities=14% Similarity=0.164 Sum_probs=200.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
+||+|||||++|+++|..|++. |.+|+|||+++..+.. .. .+. . + .... .....++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~--~~---~~~----~--~-~~~~--------~~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL--SA---GMQ----L--Y-LEGK--------VKDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC--GG---GHH----H--H-HTTS--------SCCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc--cc---cch----h--h-hcCc--------cCCHHHhhc
Confidence 4799999999999999999998 8999999998765411 00 000 0 0 0000 001111111
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCC
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
++.+.+++++++++.++++..++.+. +. |.+.+...++..+++||+||+|||+.|..|++||.+. .+ +++...+
T Consensus 61 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~~--v~~~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~-~~-v~~~~~~ 134 (447)
T 1nhp_A 61 MTGEKMESRGVNVFSNTEITAIQPKE--HQ--VTVKDLVSGEERVENYDKLIISPGAVPFELDIPGKDL-DN-IYLMRGR 134 (447)
T ss_dssp CCHHHHHHTTCEEEETEEEEEEETTT--TE--EEEEETTTCCEEEEECSEEEECCCEEECCCCSTTTTS-BS-EECCCHH
T ss_pred CCHHHHHHCCCEEEECCEEEEEeCCC--CE--EEEEecCCCceEEEeCCEEEEcCCCCcCCCCCCCCCC-CC-eEEECCH
Confidence 22334556789988999999887755 55 5554411122246999999999999999999998763 22 4443222
Q ss_pred CCC-------CCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech-hhHHHHHHHHhhCcHHHHHHHHHHH
Q 035902 162 ENG-------GKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR-EIVFAGMLLLKFLPCKLVDFIVVML 233 (381)
Q Consensus 162 ~~~-------~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~-~~~~~~~~~~~~l~~~~~~~~~~~~ 233 (381)
.+. ....+++++|||+|.+|+|+|..+++.|.+|+++.+.+ .++++ .+.++...
T Consensus 135 ~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~~----------------- 196 (447)
T 1nhp_A 135 QWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD-RPLGVYLDKEFTDV----------------- 196 (447)
T ss_dssp HHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTTTCCHHHHHH-----------------
T ss_pred HHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc-ccccccCCHHHHHH-----------------
Confidence 111 11158999999999999999999999999999999988 55552 22222221
Q ss_pred hhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC-e---EEEcCCcEeeccEEE
Q 035902 234 SKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN-E---VEFENGKIEEFEAII 307 (381)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~-~---v~~~~g~~~~~D~vi 307 (381)
+.+.+++.+++++.+ |++++.+ . +.+ +++++++|.||
T Consensus 197 ------------------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi 239 (447)
T 1nhp_A 197 ------------------------------------LTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVV 239 (447)
T ss_dssp ------------------------------------HHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEE
T ss_pred ------------------------------------HHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEE
Confidence 244556778998887 8888754 2 444 56789999999
Q ss_pred EecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccc-------------ccCccHHHHHHHHHhh
Q 035902 308 FATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTG-------------LHGISIDAKNIANDIN 373 (381)
Q Consensus 308 ~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~-------------~~~a~~~a~~~a~~i~ 373 (381)
+|+|++|+++ ++. . . + ++.+|++.+| +.++++.|+|||+|||+.. ...|..||+.+|++|.
T Consensus 240 ~a~G~~p~~~-~~~-~-~-~~~~~~G~i~Vd-~~~~t~~~~Iya~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~ 314 (447)
T 1nhp_A 240 VAVGVRPNTA-WLK-G-T-LELHPNGLIKTD-EYMRTSEPDVFAVGDATLIKYNPADTEVNIALATNARKQGRFAVKNLE 314 (447)
T ss_dssp ECSCEEESCG-GGT-T-T-SCBCTTSCBCCC-TTCBCSSTTEEECGGGSCEEEGGGTEEECCCCHHHHHHHHHHHHHTSS
T ss_pred ECcCCCCChH-HHH-h-h-hhhcCCCcEEEC-ccccCCCCCEEEeeeEEEeeccCCCCceechhHHHHHHHHHHHHHhhc
Confidence 9999999986 444 3 3 4 6678999999 5677889999999999862 1279999999999998
Q ss_pred hc
Q 035902 374 LA 375 (381)
Q Consensus 374 ~~ 375 (381)
+.
T Consensus 315 g~ 316 (447)
T 1nhp_A 315 EP 316 (447)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 69
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=100.00 E-value=2.3e-33 Score=258.96 Aligned_cols=283 Identities=19% Similarity=0.208 Sum_probs=201.3
Q ss_pred CC-cccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHH
Q 035902 1 ME-EVPVVIVGAGPAGLATSACLNNLSV--PNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRI 77 (381)
Q Consensus 1 M~-~~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (381)
|+ ++||+|||||++|+++|..|++.|. +|+|+|++. +..|....++ . .+.......
T Consensus 1 M~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~--------------~-----~~~~~~~~~ 59 (384)
T 2v3a_A 1 MSERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLS--------------T-----GFSKNKDAD 59 (384)
T ss_dssp ---CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGG--------------G-----TTTTTCCHH
T ss_pred CCCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCccccc--------------H-----HHhCCCCHH
Confidence 53 5899999999999999999999984 689999875 2122111000 0 001112233
Q ss_pred HHHH-HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCccee
Q 035902 78 SFIN-YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYM 156 (381)
Q Consensus 78 ~~~~-~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~ 156 (381)
++.. ++.+++++++++++.++++..++... .. |.+.+ ..+.||+||+|||+.|..|+++|.+. ..++
T Consensus 60 ~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~--~~--v~~~~------~~~~~d~lviAtG~~p~~p~i~g~~~--~~v~ 127 (384)
T 2v3a_A 60 GLAMAEPGAMAEQLNARILTHTRVTGIDPGH--QR--IWIGE------EEVRYRDLVLAWGAEPIRVPVEGDAQ--DALY 127 (384)
T ss_dssp HHEEECHHHHHHHTTCEEECSCCCCEEEGGG--TE--EEETT------EEEECSEEEECCCEEECCCCCBSTTT--TCEE
T ss_pred HhhccCHHHHHHhCCcEEEeCCEEEEEECCC--CE--EEECC------cEEECCEEEEeCCCCcCCCCCCCcCc--CCEE
Confidence 4432 45666677899988888888887654 33 66543 46999999999999999998888652 2245
Q ss_pred ecCCCCCCC-----CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechh-hHHHHHHHHhhCcHHHHHHHH
Q 035902 157 HSSKYENGG-----KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTRE-IVFAGMLLLKFLPCKLVDFIV 230 (381)
Q Consensus 157 ~~~~~~~~~-----~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~-~~~~~~~~~~~l~~~~~~~~~ 230 (381)
+...+.+.. ...+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .+++.. +.++...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~~~~~~~~~~-------------- 192 (384)
T 2v3a_A 128 PINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE-QVMPGLLHPAAAKA-------------- 192 (384)
T ss_dssp ECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTTSCHHHHHH--------------
T ss_pred EECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc-chhhcccCHHHHHH--------------
Confidence 544432211 1248999999999999999999999999999999988 555542 2222222
Q ss_pred HHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eEEEcCCcEeecc
Q 035902 231 VMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EVEFENGKIEEFE 304 (381)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v~~~~g~~~~~D 304 (381)
+.+.+++.+++++.+ |++++.+ .+.+.+|+++++|
T Consensus 193 ---------------------------------------l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d 233 (384)
T 2v3a_A 193 ---------------------------------------VQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCD 233 (384)
T ss_dssp ---------------------------------------HHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEES
T ss_pred ---------------------------------------HHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECC
Confidence 244456678888877 7777542 4677889999999
Q ss_pred EEEEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccc--cc---c--CccHHHHHHHHHhhhc
Q 035902 305 AIIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRT--GL---H--GISIDAKNIANDINLA 375 (381)
Q Consensus 305 ~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~--~~---~--~a~~~a~~~a~~i~~~ 375 (381)
.||+|+|.+|+++ ++. . .++-..+| +.+| +.++++.|||||+|||+. +. . .|..||+.+|++|.+.
T Consensus 234 ~vv~a~G~~p~~~-l~~-~-~g~~~~~g-i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~~~~a~~~g~~~a~~i~g~ 306 (384)
T 2v3a_A 234 LVVSAVGLRPRTE-LAF-A-AGLAVNRG-IVVD-RSLRTSHANIYALGDCAEVDGLNLLYVMPLMACARALAQTLAGN 306 (384)
T ss_dssp EEEECSCEEECCH-HHH-H-TTCCBSSS-EEEC-TTCBCSSTTEEECGGGEEETTBCCCSHHHHHHHHHHHHHHHTTC
T ss_pred EEEECcCCCcCHH-HHH-H-CCCCCCCC-EEEC-CCCCCCCCCEEEeeeeeeECCCCcchHHHHHHHHHHHHHHhcCC
Confidence 9999999999986 443 3 56622367 8888 457789999999999974 21 1 5789999999999864
No 70
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=100.00 E-value=1.1e-33 Score=270.47 Aligned_cols=304 Identities=14% Similarity=0.112 Sum_probs=197.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC--------CCCCCcCCC-CCCCeeeecCCc----ccccCCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED--------CSASLWKKR-AYDRMKLHLAKQ----FCELPHMPFPSR 69 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~--------~~g~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~ 69 (381)
++||+||||||+|+++|..|++.|.+|+|||+++ .+||.|.+. +.+...+..... ......+.....
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~ 111 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE 111 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccC
Confidence 5899999999999999999999999999999854 577755431 111100000000 000000111001
Q ss_pred CCCCCCHHHHHHHHH-----------HHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCC
Q 035902 70 TPTFVPRISFINYVD-----------NYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGE 138 (381)
Q Consensus 70 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~ 138 (381)
.........+.++.+ ..++..+++++.+. +..++ . ....|...++ +...+.||+||||||+
T Consensus 112 ~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~-a~~~d--~--~~v~v~~~~g---~~~~i~~d~lViATGs 183 (519)
T 3qfa_A 112 ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAY-GQFIG--P--HRIKATNNKG---KEKIYSAERFLIATGE 183 (519)
T ss_dssp SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEEE--T--TEEEEECTTC---CCCEEEEEEEEECCCE
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEE-EEEee--C--CEEEEEcCCC---CEEEEECCEEEEECCC
Confidence 011222333333222 23444566654433 33332 2 3444444333 2357999999999999
Q ss_pred CCCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHH
Q 035902 139 NGLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLL 218 (381)
Q Consensus 139 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~ 218 (381)
.|..|++||... .+.++.++.... ..+++++|||+|.+|+|+|..+++.|.+|+++.|. .+++..+.++...+
T Consensus 184 ~p~~p~i~G~~~---~~~t~~~~~~l~-~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~~l~~~d~~~~~~~- 256 (519)
T 3qfa_A 184 RPRYLGIPGDKE---YCISSDDLFSLP-YCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS--ILLRGFDQDMANKI- 256 (519)
T ss_dssp EECCCCCTTHHH---HCBCHHHHTTCS-SCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTSCHHHHHHH-
T ss_pred CcCCCCCCCccC---ceEcHHHHhhhh-hcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc--cccccCCHHHHHHH-
Confidence 999998888643 233443333332 35788999999999999999999999999999984 46666655544443
Q ss_pred hhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEe---C---
Q 035902 219 KFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSIN---R--- 290 (381)
Q Consensus 219 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~---~--- 290 (381)
.+.+++.+|+++.+ ++++. .
T Consensus 257 ----------------------------------------------------~~~l~~~GV~v~~~~~v~~v~~~~~~~~ 284 (519)
T 3qfa_A 257 ----------------------------------------------------GEHMEEHGIKFIRQFVPIKVEQIEAGTP 284 (519)
T ss_dssp ----------------------------------------------------HHHHHHTTCEEEESEEEEEEEEEECCTT
T ss_pred ----------------------------------------------------HHHHHHCCCEEEeCCeEEEEEEccCCCC
Confidence 33345667777766 44443 2
Q ss_pred Ce--EEE--cCC-c--EeeccEEEEecCCCCCcchhccccCCcc-cc-cCCCCCCCCCCCCCCCCcEEEEeccc-cccc-
Q 035902 291 NE--VEF--ENG-K--IEEFEAIIFATGYKSTVRNWLKRADKDF-FD-EYGMPKRNCPNHWKGENGLYCAGFSR-TGLH- 359 (381)
Q Consensus 291 ~~--v~~--~~g-~--~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~-~~g~~~~~~~~~~~~~~~ifa~Gd~~-~~~~- 359 (381)
+. +.+ .++ + ++++|.|++|+|++|+++.+.. +..++ ++ ++|++.+| +.++++.|||||+|||+ +.+.
T Consensus 285 ~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~l~l-~~~gl~~~~~~G~I~Vd-~~~~Ts~~~IyA~GD~~~g~~~~ 362 (519)
T 3qfa_A 285 GRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRKIGL-ETVGVKINEKTGKIPVT-DEEQTNVPYIYAIGDILEDKVEL 362 (519)
T ss_dssp CEEEEEEEESSSSCEEEEEESEEEECSCEEESCSSSCS-TTTTCCCCTTTCCBCCC-TTSBCSSTTEEECGGGBSSSCCC
T ss_pred ceEEEEEEECCCcEEEEEECCEEEEecCCcccCCCCCh-hhcCcEEcCCCCeEeeC-CCCccCCCCEEEEEeccCCCCcc
Confidence 22 222 344 2 5689999999999999865423 44666 66 57999999 56778999999999998 4333
Q ss_pred --CccHHHHHHHHHhhhc
Q 035902 360 --GISIDAKNIANDINLA 375 (381)
Q Consensus 360 --~a~~~a~~~a~~i~~~ 375 (381)
.|..||+.+|++|.+.
T Consensus 363 ~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 363 TPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHcCC
Confidence 7899999999999864
No 71
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=100.00 E-value=7.7e-33 Score=262.98 Aligned_cols=302 Identities=16% Similarity=0.148 Sum_probs=198.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC---------CCCCCcCCC-CCCCeeeecCCc----ccccCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED---------CSASLWKKR-AYDRMKLHLAKQ----FCELPHMPFPS 68 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~---------~~g~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~ 68 (381)
++||+|||||++|+++|..|++.|.+|+|||+.. .+||.|.+. +.+...+..... ......+.+..
T Consensus 9 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 88 (483)
T 3dgh_A 9 DYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWNV 88 (483)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCccc
Confidence 5899999999999999999999999999999421 367765431 111100000000 00000010000
Q ss_pred CCCCCCCHHHHHHHHH-----------HHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccC
Q 035902 69 RTPTFVPRISFINYVD-----------NYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATG 137 (381)
Q Consensus 69 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG 137 (381)
......+...+.++.+ ..+++.++++..+. ...+ +. ..+.+...++ ...+.||+||+|||
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~-a~~~--~~--~~v~v~~~~g----~~~~~~d~lviATG 159 (483)
T 3dgh_A 89 DDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGL-GSFV--DS--HTLLAKLKSG----ERTITAQTFVIAVG 159 (483)
T ss_dssp CCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSE-EEEE--ET--TEEEEECTTC----CEEEEEEEEEECCC
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEc--cC--CEEEEEeCCC----eEEEEcCEEEEeCC
Confidence 1011223333333332 22344466554332 2222 22 4444544433 15799999999999
Q ss_pred CCCCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHH
Q 035902 138 ENGLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLL 217 (381)
Q Consensus 138 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~ 217 (381)
+.|..|++||.+.. .+++.+.... ...+++++|||+|.+|+|+|..+++.|.+|+++.|. .+++..+.++...+
T Consensus 160 s~p~~p~i~G~~~~---~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~--~~l~~~d~~~~~~l 233 (483)
T 3dgh_A 160 GRPRYPDIPGAVEY---GITSDDLFSL-DREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRS--IVLRGFDQQMAELV 233 (483)
T ss_dssp EEECCCSSTTHHHH---CBCHHHHTTC-SSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS--CSSTTSCHHHHHHH
T ss_pred CCcCCCCCCCcccc---cCcHHHHhhh-hhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCC--CCCcccCHHHHHHH
Confidence 99999999887432 2343333332 235789999999999999999999999999999984 45565555444333
Q ss_pred HhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC--C--
Q 035902 218 LKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR--N-- 291 (381)
Q Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~--~-- 291 (381)
.+.+++.+|+++.+ ++++.. +
T Consensus 234 -----------------------------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~~~ 260 (483)
T 3dgh_A 234 -----------------------------------------------------AASMEERGIPFLRKTVPLSVEKQDDGK 260 (483)
T ss_dssp -----------------------------------------------------HHHHHHTTCCEEETEEEEEEEECTTSC
T ss_pred -----------------------------------------------------HHHHHhCCCEEEeCCEEEEEEEcCCCc
Confidence 33345667778777 777763 2
Q ss_pred -eEEEcCCc-----EeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEecccc-ccc---C
Q 035902 292 -EVEFENGK-----IEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRT-GLH---G 360 (381)
Q Consensus 292 -~v~~~~g~-----~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~-~~~---~ 360 (381)
.+.+.+++ ++++|.|++|+|++|+++.+.. +..++ +++ |++.+| +.++++.|||||+|||+. .+. .
T Consensus 261 ~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~~l~l-~~~gl~~~~-G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~~ 337 (483)
T 3dgh_A 261 LLVKYKNVETGEESEDVYDTVLWAIGRKGLVDDLNL-PNAGVTVQK-DKIPVD-SQEATNVANIYAVGDIIYGKPELTPV 337 (483)
T ss_dssp EEEEEEETTTCCEEEEEESEEEECSCEEECCGGGTG-GGTTCCCBT-TBBCCC-TTCBCSSTTEEECSTTBTTSCCCHHH
T ss_pred EEEEEecCCCCceeEEEcCEEEECcccccCcCcCCc-hhcCccccC-CEEEEC-cCCccCCCCEEEEEcccCCCCccHHH
Confidence 25666653 7899999999999999975532 33666 666 999999 567789999999999974 333 8
Q ss_pred ccHHHHHHHHHhhhc
Q 035902 361 ISIDAKNIANDINLA 375 (381)
Q Consensus 361 a~~~a~~~a~~i~~~ 375 (381)
|..||+.+|++|.+.
T Consensus 338 A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 338 AVLAGRLLARRLYGG 352 (483)
T ss_dssp HHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHcCC
Confidence 899999999999874
No 72
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=100.00 E-value=1.4e-33 Score=268.30 Aligned_cols=305 Identities=16% Similarity=0.130 Sum_probs=199.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEec--------CCCCCCCcCCC-CCCCeeeecCCc----ccccCCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILER--------EDCSASLWKKR-AYDRMKLHLAKQ----FCELPHMPFPSR 69 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~--------~~~~g~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~ 69 (381)
++||+|||||+||+++|..|++.|.+|+|||+ ...+||.|.+. +++...+..... ......+.....
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~ 85 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVA 85 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccC
Confidence 58999999999999999999999999999997 45678866431 111100000000 000001111101
Q ss_pred CCCCCCHHHHHHHH-----------HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCC
Q 035902 70 TPTFVPRISFINYV-----------DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGE 138 (381)
Q Consensus 70 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~ 138 (381)
.+.......+.++. ...+++.++++..+ .+..+ + ...+.+...++ +...+.||+||+|||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g-~~~~~---~-~~~v~v~~~~g---~~~~~~~d~lViATGs 157 (488)
T 3dgz_A 86 QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNI-KASFV---D-EHTVRGVDKGG---KATLLSAEHIVIATGG 157 (488)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECC-EEEES---S-SSEEEEECTTS---CEEEEEEEEEEECCCE
T ss_pred CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEE-EEEEc---c-CCeEEEEeCCC---ceEEEECCEEEEcCCC
Confidence 01122333333332 22334456665332 23222 1 24444443332 3367999999999999
Q ss_pred CCCCCC-CCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHH
Q 035902 139 NGLIPE-VPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLL 217 (381)
Q Consensus 139 ~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~ 217 (381)
.|..|+ +||.+.. .+++.++... ...+++++|||+|.+|+|+|..+++.|.+|+++.|.+ +++..+.++...+
T Consensus 158 ~p~~p~~i~G~~~~---~~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~--~l~~~d~~~~~~l 231 (488)
T 3dgz_A 158 RPRYPTQVKGALEY---GITSDDIFWL-KESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI--PLRGFDQQMSSLV 231 (488)
T ss_dssp EECCCSSCBTHHHH---CBCHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC--SSTTSCHHHHHHH
T ss_pred CCCCCCCCCCcccc---cCcHHHHHhh-hhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc--ccccCCHHHHHHH
Confidence 999998 8886431 2333333333 2357899999999999999999999999999999864 4555554444333
Q ss_pred HhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC---C-
Q 035902 218 LKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR---N- 291 (381)
Q Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~---~- 291 (381)
.+.+++.+|+++.+ ++++.. +
T Consensus 232 -----------------------------------------------------~~~l~~~gv~~~~~~~v~~i~~~~~~~ 258 (488)
T 3dgz_A 232 -----------------------------------------------------TEHMESHGTQFLKGCVPSHIKKLPTNQ 258 (488)
T ss_dssp -----------------------------------------------------HHHHHHTTCEEEETEEEEEEEECTTSC
T ss_pred -----------------------------------------------------HHHHHHCCCEEEeCCEEEEEEEcCCCc
Confidence 33446678888877 667653 2
Q ss_pred -eEEEcC---Cc--EeeccEEEEecCCCCCcchhccccCCcc-cc-cCCCCCCCCCCCCCCCCcEEEEecccc-ccc---
Q 035902 292 -EVEFEN---GK--IEEFEAIIFATGYKSTVRNWLKRADKDF-FD-EYGMPKRNCPNHWKGENGLYCAGFSRT-GLH--- 359 (381)
Q Consensus 292 -~v~~~~---g~--~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~-~~g~~~~~~~~~~~~~~~ifa~Gd~~~-~~~--- 359 (381)
.+.+.+ |+ ++++|.|++|+|++|++..+.. +..++ ++ ++|++.+| +.++++.|||||+|||+. .+.
T Consensus 259 ~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~l-~~~g~~~~~~~G~i~vd-~~~~t~~~~IyA~GD~~~~~~~~~~ 336 (488)
T 3dgz_A 259 LQVTWEDHASGKEDTGTFDTVLWAIGRVPETRTLNL-EKAGISTNPKNQKIIVD-AQEATSVPHIYAIGDVAEGRPELTP 336 (488)
T ss_dssp EEEEEEETTTTEEEEEEESEEEECSCEEESCGGGTG-GGGTCCBCSSSCCBCCC-TTSBCSSTTEEECGGGBTTCCCCHH
T ss_pred EEEEEEeCCCCeeEEEECCEEEEcccCCcccCcCCc-cccCcEecCCCCeEeEC-CCCccCCCCEEEeEEecCCCCcchh
Confidence 255544 54 4799999999999999975422 33666 66 78999999 567789999999999973 333
Q ss_pred CccHHHHHHHHHhhhcc
Q 035902 360 GISIDAKNIANDINLAL 376 (381)
Q Consensus 360 ~a~~~a~~~a~~i~~~l 376 (381)
.|..||+.+|++|.+..
T Consensus 337 ~A~~~g~~aa~~i~g~~ 353 (488)
T 3dgz_A 337 TAIKAGKLLAQRLFGKS 353 (488)
T ss_dssp HHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 78999999999998753
No 73
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=7.5e-34 Score=263.96 Aligned_cols=282 Identities=17% Similarity=0.178 Sum_probs=199.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV--PNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
++|+|||||++|+++|..|++.|. +|+|||+++..+. ... . .+..+..... ... ++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y--~~~-----~--l~~~~l~~~~-----~~~------~~~~ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPY--QRP-----P--LSKAYLKSGG-----DPN------SLMF 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSB--CSG-----G--GGTGGGGSCC-----CTT------SSBS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCC--CCc-----c--CCHHHHCCCC-----CHH------HccC
Confidence 689999999999999999999998 8999999885542 110 0 0000100000 000 1111
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCC
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
...+.+.+.+++++. ++++.++... .. +.+.++ ..+.||+||+|||+.|..|++||.+. .+ ++.....
T Consensus 62 ~~~~~~~~~~i~~~~-~~v~~id~~~--~~--v~~~~g-----~~~~~d~lvlAtG~~p~~~~i~g~~~-~~-v~~~~~~ 129 (404)
T 3fg2_P 62 RPEKFFQDQAIELIS-DRMVSIDREG--RK--LLLASG-----TAIEYGHLVLATGARNRMLDVPNASL-PD-VLYLRTL 129 (404)
T ss_dssp SCHHHHHHTTEEEEC-CCEEEEETTT--TE--EEESSS-----CEEECSEEEECCCEEECCCCSTTTTS-TT-EECCSSH
T ss_pred CCHHHHHhCCCEEEE-EEEEEEECCC--CE--EEECCC-----CEEECCEEEEeeCCCccCCCCCCCCC-Cc-EEEECCH
Confidence 112344556888888 8899988754 43 777776 67999999999999999888888653 22 2222111
Q ss_pred CC-----CCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech-hhHHHHHHHHhhCcHHHHHHHHHHHhh
Q 035902 162 EN-----GGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR-EIVFAGMLLLKFLPCKLVDFIVVMLSK 235 (381)
Q Consensus 162 ~~-----~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~-~~~~~~~~~~~~l~~~~~~~~~~~~~~ 235 (381)
.+ .....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++++ ...++...
T Consensus 130 ~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~-~~~~~~~~~~~~~~------------------- 189 (404)
T 3fg2_P 130 DESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP-RVMARVVTPEISSY------------------- 189 (404)
T ss_dssp HHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTSCHHHHHH-------------------
T ss_pred HHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-cchhhccCHHHHHH-------------------
Confidence 11 111257999999999999999999999999999999988 44443 22222221
Q ss_pred hhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC-----eEEEcCCcEeeccEEEE
Q 035902 236 MKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN-----EVEFENGKIEEFEAIIF 308 (381)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~-----~v~~~~g~~~~~D~vi~ 308 (381)
+.+.+++.+++++.+ |+++..+ ++.+++|+++++|.||+
T Consensus 190 ----------------------------------l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~ 235 (404)
T 3fg2_P 190 ----------------------------------FHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVV 235 (404)
T ss_dssp ----------------------------------HHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEE
T ss_pred ----------------------------------HHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEE
Confidence 244556778888877 8887653 57889999999999999
Q ss_pred ecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc-------------cCccHHHHHHHHHhhhc
Q 035902 309 ATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-------------HGISIDAKNIANDINLA 375 (381)
Q Consensus 309 a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-------------~~a~~~a~~~a~~i~~~ 375 (381)
|+|++|+++. +. . .++-..+| +.+| +.++++.||||++|||+..+ ..|..||+.+|++|.+.
T Consensus 236 a~G~~p~~~l-~~-~-~gl~~~~G-i~vd-~~~~t~~~~iya~GD~a~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g~ 310 (404)
T 3fg2_P 236 GVGVIPNVEI-AA-A-AGLPTAAG-IIVD-QQLLTSDPHISAIGDCALFESVRFGETMRVESVQNATDQARCVAARLTGD 310 (404)
T ss_dssp CCCEEECCHH-HH-H-TTCCBSSS-EEEC-TTSBCSSTTEEECGGGEEEEETTTTEEECCCSHHHHHHHHHHHHHHTTTC
T ss_pred CcCCccCHHH-HH-h-CCCCCCCC-EEEC-CCcccCCCCEEEeecceeecCccCCceeeehHHHHHHHHHHHHHHHhCCC
Confidence 9999999853 33 3 56633356 8888 56678999999999997643 26889999999999875
Q ss_pred c
Q 035902 376 L 376 (381)
Q Consensus 376 l 376 (381)
-
T Consensus 311 ~ 311 (404)
T 3fg2_P 311 A 311 (404)
T ss_dssp C
T ss_pred C
Confidence 3
No 74
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=100.00 E-value=7.7e-34 Score=265.60 Aligned_cols=285 Identities=15% Similarity=0.116 Sum_probs=198.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV--PNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
.+||+|||||++|+++|..|++.|. +|+|||++++.+.. .. . .+..+.. .......+.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~--~~-----~--l~~~~~~-----------~~~~~~~~~ 63 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHH--LP-----P--LSKAYLA-----------GKATAESLY 63 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBC--SG-----G--GGTTTTT-----------TCSCSGGGB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCc--CC-----C--CcHHHhC-----------CCCChHHhc
Confidence 5899999999999999999999998 79999998765411 00 0 0000000 000000110
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCc-c-eeec
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEG-E-YMHS 158 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~-~-~~~~ 158 (381)
....+.+++.+++++++++|..++.+. .. |.+.++ +.+.||+||+|||+.|..|+++|.+. .+ . +.+.
T Consensus 64 ~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~--v~~~~g-----~~~~~d~lviAtG~~p~~~~i~G~~~-~~~~~v~~~ 133 (431)
T 1q1r_A 64 LRTPDAYAAQNIQLLGGTQVTAINRDR--QQ--VILSDG-----RALDYDRLVLATGGRPRPLPVASGAV-GKANNFRYL 133 (431)
T ss_dssp SSCHHHHHHTTEEEECSCCEEEEETTT--TE--EEETTS-----CEEECSEEEECCCEEECCCGGGTTHH-HHSTTEEES
T ss_pred ccCHHHHHhCCCEEEeCCEEEEEECCC--CE--EEECCC-----CEEECCEEEEcCCCCccCCCCCCccc-CCCceEEEE
Confidence 011233456788999999999998654 33 777665 57999999999999999888888652 22 0 2222
Q ss_pred CCCCC-----CCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech-hhHHHHHHHHhhCcHHHHHHHHHH
Q 035902 159 SKYEN-----GGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR-EIVFAGMLLLKFLPCKLVDFIVVM 232 (381)
Q Consensus 159 ~~~~~-----~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~-~~~~~~~~~~~~l~~~~~~~~~~~ 232 (381)
....+ .....+++++|||+|.+|+|+|..|.+.|.+|+++.+.+ .++++ .+.++...+
T Consensus 134 ~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~~~~~~~~~~l--------------- 197 (431)
T 1q1r_A 134 RTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA-RVLERVTAPPVSAFY--------------- 197 (431)
T ss_dssp SSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTTTTSCHHHHHHH---------------
T ss_pred CCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccchhhHHHHHHH---------------
Confidence 11111 011258999999999999999999999999999999988 55553 222222222
Q ss_pred HhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC----C---eEEEcCCcEeec
Q 035902 233 LSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR----N---EVEFENGKIEEF 303 (381)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~----~---~v~~~~g~~~~~ 303 (381)
.+.+++.+++++.+ ++++.. + .+.+++|+++++
T Consensus 198 --------------------------------------~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~ 239 (431)
T 1q1r_A 198 --------------------------------------EHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPA 239 (431)
T ss_dssp --------------------------------------HHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEEC
T ss_pred --------------------------------------HHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEc
Confidence 33445567888877 777764 2 467789999999
Q ss_pred cEEEEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc-------------cCccHHHHHHHH
Q 035902 304 EAIIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL-------------HGISIDAKNIAN 370 (381)
Q Consensus 304 D~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~-------------~~a~~~a~~~a~ 370 (381)
|.||+|+|++|+++ ++. . .++-..+| +.+| +.++++.|+|||+|||+..+ ..|..||+.+|+
T Consensus 240 D~Vv~a~G~~p~~~-l~~-~-~gl~~~~g-i~Vd-~~~~ts~~~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~ 314 (431)
T 1q1r_A 240 DLVIAGIGLIPNCE-LAS-A-AGLQVDNG-IVIN-EHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQARKIAA 314 (431)
T ss_dssp SEEEECCCEEECCH-HHH-H-TTCCBSSS-EECC-TTSBCSSTTEEECGGGEEEEETTTTEEEECCSHHHHHHHHHHHHH
T ss_pred CEEEECCCCCcCcc-hhh-c-cCCCCCCC-EEEC-CCcccCCCCEEEEEeEEEEccccCCceEeeCHHHHHHHHHHHHHH
Confidence 99999999999986 343 3 55532355 8888 56778999999999998653 258899999999
Q ss_pred Hhhhcc
Q 035902 371 DINLAL 376 (381)
Q Consensus 371 ~i~~~l 376 (381)
+|.+..
T Consensus 315 ~i~g~~ 320 (431)
T 1q1r_A 315 ILCGKV 320 (431)
T ss_dssp HHTTCC
T ss_pred HhcCCC
Confidence 998754
No 75
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=100.00 E-value=3e-33 Score=265.32 Aligned_cols=288 Identities=17% Similarity=0.222 Sum_probs=199.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
+||+|||||++|+++|..|++. |.+|+|||+++..+.... .+. . + ... ......++..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-----~~~----~-~--~~~--------~~~~~~~l~~ 96 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-----GLP----Y-V--ISG--------AIASTEKLIA 96 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-----GHH----H-H--HTT--------SSSCGGGGBS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-----Ccc----h-h--hcC--------CcCCHHHhhh
Confidence 6899999999999999999996 889999999876542110 000 0 0 000 0001111111
Q ss_pred -HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCC
Q 035902 82 -YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSK 160 (381)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~ 160 (381)
+.+.+.++++++++++++|..++.+. +. +.+.+...++...+.||+||+|||+.|..|+++|.+. .+ +++...
T Consensus 97 ~~~~~~~~~~gv~~~~~~~v~~i~~~~--~~--v~v~~~~~g~~~~~~~d~lviAtG~~p~~p~i~G~~~-~~-v~~~~~ 170 (480)
T 3cgb_A 97 RNVKTFRDKYGIDAKVRHEVTKVDTEK--KI--VYAEHTKTKDVFEFSYDRLLIATGVRPVMPEWEGRDL-QG-VHLLKT 170 (480)
T ss_dssp SCHHHHHHTTCCEEESSEEEEEEETTT--TE--EEEEETTTCCEEEEECSEEEECCCEEECCCCCBTTTS-BT-EECCSS
T ss_pred cCHHHHHhhcCCEEEeCCEEEEEECCC--CE--EEEEEcCCCceEEEEcCEEEECCCCcccCCCCCCccC-CC-EEEeCC
Confidence 12233355689999999999988755 55 4444311112247999999999999999998988753 22 333322
Q ss_pred CCCCC-------CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHH
Q 035902 161 YENGG-------KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVML 233 (381)
Q Consensus 161 ~~~~~-------~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~ 233 (381)
..+.. ...+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .+++..+.++...+
T Consensus 171 ~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~~~~l---------------- 233 (480)
T 3cgb_A 171 IPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND-HIGTIYDGDMAEYI---------------- 233 (480)
T ss_dssp HHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG-GTTSSSCHHHHHHH----------------
T ss_pred HHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-chhhcCCHHHHHHH----------------
Confidence 21111 1158999999999999999999999999999999988 55554333322222
Q ss_pred hhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCe-E--EEcCCcEeeccEEEE
Q 035902 234 SKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNE-V--EFENGKIEEFEAIIF 308 (381)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~-v--~~~~g~~~~~D~vi~ 308 (381)
.+.+++.+++++.+ |++++.++ + ...++.++++|.||+
T Consensus 234 -------------------------------------~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~vi~ 276 (480)
T 3cgb_A 234 -------------------------------------YKEADKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLV 276 (480)
T ss_dssp -------------------------------------HHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEEEECSEEEE
T ss_pred -------------------------------------HHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCEEEcCEEEE
Confidence 33445667888876 77776542 2 223456899999999
Q ss_pred ecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccc-------------ccCccHHHHHHHHHhhh
Q 035902 309 ATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTG-------------LHGISIDAKNIANDINL 374 (381)
Q Consensus 309 a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~-------------~~~a~~~a~~~a~~i~~ 374 (381)
|+|++|+++ ++. . .++ ++++|++.+| +.++++.|||||+|||+.. ...|..||+.+|++|.+
T Consensus 277 a~G~~p~~~-~l~-~-~g~~~~~~G~I~Vd-~~~~ts~p~IyA~GD~~~~~~~~~g~~~~~~~~~~A~~qg~~aa~~i~g 352 (480)
T 3cgb_A 277 SVGVKPNTD-FLE-G-TNIRTNHKGAIEVN-AYMQTNVQDVYAAGDCATHYHVIKEIHDHIPIGTTANKQGRLAGLNMLD 352 (480)
T ss_dssp CSCEEESCG-GGT-T-SCCCBCTTSCBCCC-TTSBCSSTTEEECGGGBCEEBTTTCSEECCCCHHHHHHHHHHHHHHHTT
T ss_pred CcCCCcChH-HHH-h-CCcccCCCCCEEEC-CCccCCCCCEEEeeeEEEecCCCCCcceecchHHHHHHHHHHHHHHhcC
Confidence 999999986 343 3 566 6778999999 5677889999999999842 12799999999999987
Q ss_pred c
Q 035902 375 A 375 (381)
Q Consensus 375 ~ 375 (381)
.
T Consensus 353 ~ 353 (480)
T 3cgb_A 353 K 353 (480)
T ss_dssp C
T ss_pred C
Confidence 4
No 76
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=100.00 E-value=9.8e-32 Score=254.49 Aligned_cols=344 Identities=18% Similarity=0.266 Sum_probs=206.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC-----CCeEEEecCCCCCCCcCCCCC-CCeeeecC--Cccccc--CCCCC-------
Q 035902 4 VPVVIVGAGPAGLATSACLNNLS-----VPNIILEREDCSASLWKKRAY-DRMKLHLA--KQFCEL--PHMPF------- 66 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g-----~~v~lie~~~~~g~~~~~~~~-~~~~~~~~--~~~~~~--~~~~~------- 66 (381)
+||+|||||++|+++|..|++.| .+|+|||+++.+| |....+ +......+ ..+... +..++
T Consensus 31 ~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 31 HDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 69999999999999999999999 9999999999877 554332 11111100 000000 00000
Q ss_pred --------CCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCC-CCeE--EEEEeecCCCceEEEEeCEEEEc
Q 035902 67 --------PSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDEN-AKAW--IIVAKNTALDAYEEYVARYLVVA 135 (381)
Q Consensus 67 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~--~v~~~~~~~~~~~~~~~d~vIlA 135 (381)
......++.+.++.+|++++++++++.++++++|++++.+++ .+.| .|.+.++. ++...+.||+||+|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~-g~~~~~~~d~lVlA 187 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNAD-GEELVRTTRALVVS 187 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETT-SCEEEEEESEEEEC
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCC-CceEEEEeCEEEEC
Confidence 001123457889999999999999999999999999988621 2444 56666653 33448999999999
Q ss_pred cCCCCCCCCCCCCCCCCc--ceeecCCCCCC-CCC-----CCCeEEEEcCCCCHHHHHHHHhhC--CCeeEEEEecCcce
Q 035902 136 TGENGLIPEVPGLGSFEG--EYMHSSKYENG-GKF-----IGKNVLVVGCGNSGMEIAYDLSSC--GACTSIVVRGPVHV 205 (381)
Q Consensus 136 tG~~~~~~~~~g~~~~~~--~~~~~~~~~~~-~~~-----~~~~v~viG~G~~~~e~a~~l~~~--g~~v~~i~r~~~~~ 205 (381)
||+.|..|.. ++.+.+ .++++..+... ..+ .+++++|||+|.+|+|+|..|.+. +.+|+++.|++ .+
T Consensus 188 tG~~p~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~-~~ 264 (463)
T 3s5w_A 188 PGGTPRIPQV--FRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRAS-AL 264 (463)
T ss_dssp CCCEECCCGG--GGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSS-SC
T ss_pred CCCCCCCcch--hhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCC-CC
Confidence 9998877752 233334 56777765442 222 589999999999999999999999 88999999999 67
Q ss_pred echhhHHHHHHHHhhCcHHHHHHHHHHHh---hhhhcCccccCCCCCCCCCcccccccCCCccc-----cchhhhhhc-C
Q 035902 206 LTREIVFAGMLLLKFLPCKLVDFIVVMLS---KMKFGNLFKYGLERPKKGPFYFKAITGQTPTI-----DVGAMDKIR-K 276 (381)
Q Consensus 206 ~p~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~ 276 (381)
+|..+..+... .+...+.+.+..... ..+......... ....+.. ..-+.+.+. .
T Consensus 265 ~p~~~~~~~~~---~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~l~~~~~~~~ 328 (463)
T 3s5w_A 265 KPADDSPFVNE---VFAPKFTDLIYSREHAERERLLREYHNTNY-------------SVVDTDLIERIYGVFYRQKVSGI 328 (463)
T ss_dssp CBCCCCHHHHG---GGSHHHHHHHHHSCHHHHHHHHHHTGGGTS-------------SCBCHHHHHHHHHHHHHHHHHCC
T ss_pred cCccCCccchh---ccChhHHHHHhcCCHHHHHHHHHHhhccCC-------------CcCCHHHHHHHHHHHHHHHhcCC
Confidence 77655433222 222222221111000 000000000000 0000000 001122222 2
Q ss_pred CCeEEccC--cceEeCC--e--EEEc---CCc--EeeccEEEEecCCCCCc-chhccccCCcccccCCCCCCCCCCCCC-
Q 035902 277 GEIQVFPS--ITSINRN--E--VEFE---NGK--IEEFEAIIFATGYKSTV-RNWLKRADKDFFDEYGMPKRNCPNHWK- 343 (381)
Q Consensus 277 ~~v~~~~~--v~~v~~~--~--v~~~---~g~--~~~~D~vi~a~G~~p~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~- 343 (381)
.+++++.+ |+++..+ + +.+. +|+ ++++|.||+|||++|+. ..++. +....+ |.+.++......
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~-~l~~~~---g~i~v~~~~~~~~ 404 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLE-PLAEYL---GDHEIGRDYRLQT 404 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTG-GGGGGB---C--CCCTTSBCCB
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhH-HHHHHh---CCcccCccccccc
Confidence 68888888 7777643 2 5555 665 48999999999999992 23333 211112 667777222212
Q ss_pred ---CCCcEEEEecccccc-----c---CccHHHHHHHHHhh
Q 035902 344 ---GENGLYCAGFSRTGL-----H---GISIDAKNIANDIN 373 (381)
Q Consensus 344 ---~~~~ifa~Gd~~~~~-----~---~a~~~a~~~a~~i~ 373 (381)
..++||++|||.... . .|..++.+++..+.
T Consensus 405 ~~~~~~~Ifa~G~~~~~~g~~~~~l~~~a~r~~~i~~~~~~ 445 (463)
T 3s5w_A 405 DERCKVAIYAQGFSQASHGLSDTLLSVLPVRAEEISGSLYQ 445 (463)
T ss_dssp CTTBCSEEEESSCCHHHHCTTTTSSTTHHHHHHHHHHHHHH
T ss_pred CCCCCCeEEEcCCCcccCCcCccchhHHHHHHHHHHHHHHh
Confidence 246799999996521 1 55566665544443
No 77
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.98 E-value=1.3e-32 Score=256.21 Aligned_cols=283 Identities=16% Similarity=0.152 Sum_probs=199.3
Q ss_pred ccEEEECCCHHHHHHHHHHHh---CCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNN---LSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~---~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
++|+|||||++|+++|..|++ .|.+|+|||+++....... ++. .........++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~-----------------~~~-----~~~~~~~~~~~~ 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA-----------------LPH-----VAIGVRDVDELK 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS-----------------SCC-----CCSSCCCCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc-----------------hhh-----cccCCcCHHHHH
Confidence 579999999999999999999 8999999999874321100 000 001111222334
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCC
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSK 160 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~ 160 (381)
..+.+.+++.+++++.+ +|+.++.+. .. |.+.++. .+..++.||+||+|||+.|..|.++|++. ...+.+.
T Consensus 60 ~~~~~~~~~~gv~~~~~-~v~~i~~~~--~~--V~~~~g~-~~~~~~~~d~lViAtG~~~~~~~ipG~~~---~~~~~~~ 130 (409)
T 3h8l_A 60 VDLSEALPEKGIQFQEG-TVEKIDAKS--SM--VYYTKPD-GSMAEEEYDYVIVGIGAHLATELVKGWDK---YGYSVCE 130 (409)
T ss_dssp EEHHHHTGGGTCEEEEC-EEEEEETTT--TE--EEEECTT-SCEEEEECSEEEECCCCEECGGGSBTHHH---HCEESSS
T ss_pred HHHHHHHhhCCeEEEEe-eEEEEeCCC--CE--EEEccCC-cccceeeCCEEEECCCCCcCccCCCChhh---cCcCcCC
Confidence 44555666778888766 888887654 44 6666652 23356999999999999988888888754 1233333
Q ss_pred CCCCCCC------CCCeEEEEcCC-------------------C------CHHHHHH----HHhhCC----CeeEEEEec
Q 035902 161 YENGGKF------IGKNVLVVGCG-------------------N------SGMEIAY----DLSSCG----ACTSIVVRG 201 (381)
Q Consensus 161 ~~~~~~~------~~~~v~viG~G-------------------~------~~~e~a~----~l~~~g----~~v~~i~r~ 201 (381)
..+.... ..++++|||+| . .++|+|. .+.+.| .+|+++.+.
T Consensus 131 ~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g~~~~~~v~~~~~~ 210 (409)
T 3h8l_A 131 PEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPG 210 (409)
T ss_dssp TTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTTCTTTEEEEEECSS
T ss_pred HHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcCCCCCeEEEEEeCC
Confidence 3222111 12667799999 2 3677775 445666 389999987
Q ss_pred CcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEE
Q 035902 202 PVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQV 281 (381)
Q Consensus 202 ~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 281 (381)
+ .+|.....+...+ .+.+++.+|++
T Consensus 211 ~--~l~~~~~~~~~~~-----------------------------------------------------~~~l~~~gV~~ 235 (409)
T 3h8l_A 211 E--YLSDLSPNSRKAV-----------------------------------------------------ASIYNQLGIKL 235 (409)
T ss_dssp S--SSTTBCHHHHHHH-----------------------------------------------------HHHHHHHTCEE
T ss_pred c--cccccCHHHHHHH-----------------------------------------------------HHHHHHCCCEE
Confidence 6 3443333222222 34456678999
Q ss_pred ccC--cceEeCCeEEEcCCcEeeccEEEEecCCCCCcchhccccC-CcccccCCCCCCCCCCCCC-CCCcEEEEeccccc
Q 035902 282 FPS--ITSINRNEVEFENGKIEEFEAIIFATGYKSTVRNWLKRAD-KDFFDEYGMPKRNCPNHWK-GENGLYCAGFSRTG 357 (381)
Q Consensus 282 ~~~--v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~-~~~~ifa~Gd~~~~ 357 (381)
+.+ |++++++++.+++|+++++|.+|+++|++|+. ++. .. .++.+++|++.+| +..++ +.||||++|||.+.
T Consensus 236 ~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~--~l~-~~~~~l~~~~G~i~vd-~~~~~~~~~~vfa~GD~~~~ 311 (409)
T 3h8l_A 236 VHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNP--ALK-NSTPDLVDDGGFIPTD-LNMVSIKYDNVYAVGDANSM 311 (409)
T ss_dssp ECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCH--HHH-TSCGGGSCTTSCBCBB-TTSBBSSCTTEEECGGGBTT
T ss_pred EcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccH--HHH-hccccCcCCCCCEEeC-cccccCCCCCEEEeehhccC
Confidence 987 99999999999999999999999999999984 444 31 2567889999999 44555 89999999999863
Q ss_pred --cc---CccHHHHHHHHHhhhcc
Q 035902 358 --LH---GISIDAKNIANDINLAL 376 (381)
Q Consensus 358 --~~---~a~~~a~~~a~~i~~~l 376 (381)
+. .|..||+.+|++|...+
T Consensus 312 ~~~~~~~~A~~q~~~aa~~i~~~l 335 (409)
T 3h8l_A 312 TVPKLGYLAVMTGRIAAQHLANRL 335 (409)
T ss_dssp CCSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHh
Confidence 22 78999999999999988
No 78
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.98 E-value=1.8e-32 Score=257.15 Aligned_cols=293 Identities=16% Similarity=0.205 Sum_probs=204.8
Q ss_pred CCc-ccEEEECCCHHHHHHHHHHHh---CCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCH
Q 035902 1 MEE-VPVVIVGAGPAGLATSACLNN---LSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPR 76 (381)
Q Consensus 1 M~~-~~vvIIGaG~aG~~~A~~l~~---~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (381)
|+. +||+|||||++|+++|..|++ .|.+|+|||+++...... .++. ........
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~-----------------~~~~-----~~~g~~~~ 58 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVP-----------------SNPW-----VGVGWKER 58 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGG-----------------GHHH-----HHHTSSCH
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccC-----------------Cccc-----cccCccCH
Confidence 543 789999999999999999999 799999999987321000 0000 00112344
Q ss_pred HHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCccee
Q 035902 77 ISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYM 156 (381)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~ 156 (381)
.++...+.+++++.+++++ ..+|+.++.+. .. |.+.++ ..+.||+||+|||+.|..|.+||++...+...
T Consensus 59 ~~~~~~l~~~~~~~gv~~~-~~~v~~id~~~--~~--V~~~~g-----~~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~ 128 (437)
T 3sx6_A 59 DDIAFPIRHYVERKGIHFI-AQSAEQIDAEA--QN--ITLADG-----NTVHYDYLMIATGPKLAFENVPGSDPHEGPVQ 128 (437)
T ss_dssp HHHEEECHHHHHTTTCEEE-CSCEEEEETTT--TE--EEETTS-----CEEECSEEEECCCCEECGGGSTTCSTTTSSEE
T ss_pred HHHHHHHHHHHHHCCCEEE-EeEEEEEEcCC--CE--EEECCC-----CEEECCEEEECCCCCcCcccCCCCCcccCcce
Confidence 5566666777777898876 46888887654 43 777765 57999999999999999888999875433333
Q ss_pred ecCCCCCCCCC--------CCCeEEEEcCCCC----H--HHHH----HHHhhCCCe-----eEEEEecCcceechhhHHH
Q 035902 157 HSSKYENGGKF--------IGKNVLVVGCGNS----G--MEIA----YDLSSCGAC-----TSIVVRGPVHVLTREIVFA 213 (381)
Q Consensus 157 ~~~~~~~~~~~--------~~~~v~viG~G~~----~--~e~a----~~l~~~g~~-----v~~i~r~~~~~~p~~~~~~ 213 (381)
..+.+.+.... .+++++|||+|.+ | +|+| ..+.+.|.+ |+++++.+ .+.+....
T Consensus 129 ~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~-~~~~~~l~-- 205 (437)
T 3sx6_A 129 SICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEP-YIGHLGIQ-- 205 (437)
T ss_dssp CCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSS-STTCTTTT--
T ss_pred ecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCc-cccccccC--
Confidence 33332221111 1456789998654 4 8887 555566753 99999887 33111000
Q ss_pred HHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC
Q 035902 214 GMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN 291 (381)
Q Consensus 214 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~ 291 (381)
..+.....+.+.+++.+|+++.+ |++++++
T Consensus 206 ------------------------------------------------~~~~~~~~~~~~l~~~gI~~~~~~~v~~v~~~ 237 (437)
T 3sx6_A 206 ------------------------------------------------GVGDSKGILTKGLKEEGIEAYTNCKVTKVEDN 237 (437)
T ss_dssp ------------------------------------------------CCTTHHHHHHHHHHHTTCEEECSEEEEEEETT
T ss_pred ------------------------------------------------cchHHHHHHHHHHHHCCCEEEcCCEEEEEECC
Confidence 00011122355667789999988 9999998
Q ss_pred eEEEcC---------CcEeeccEEEEecCCCCCcchhccccCCcccccCCCCCCCCCCCCC-CCCcEEEEecccccc---
Q 035902 292 EVEFEN---------GKIEEFEAIIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWK-GENGLYCAGFSRTGL--- 358 (381)
Q Consensus 292 ~v~~~~---------g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~ifa~Gd~~~~~--- 358 (381)
++.+++ ++++++|.+++++|++++.. +. +..++.+++|++.+|. .+++ +.||||++|||+..+
T Consensus 238 ~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~--~~-~~~gl~~~~G~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~~~ 313 (437)
T 3sx6_A 238 KMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPA--VA-GVEGLCNPGGFVLVDE-HQRSKKYANIFAAGIAIAIPPVE 313 (437)
T ss_dssp EEEEEEECTTSCEEEEEEEECSEEEEECCEECCHH--HH-TSTTTBCTTSCBCBCT-TSBBSSCTTEEECGGGBCCCCSC
T ss_pred eEEEEecccCCccccceEEEEeEEEEcCCCcCchh--hh-ccccccCCCCcEEeCh-hccCCCCCCEEEEEEEeccCCcC
Confidence 877765 67899999999999998853 33 3356788899999994 5555 899999999998642
Q ss_pred ---------c---CccHHHHHHHHHhhhccccCC
Q 035902 359 ---------H---GISIDAKNIANDINLALTDHQ 380 (381)
Q Consensus 359 ---------~---~a~~~a~~~a~~i~~~l~~~~ 380 (381)
. .|..||+.+|+||...|+...
T Consensus 314 ~~~~~~~~pk~~~~A~~qg~~aA~ni~~~l~g~~ 347 (437)
T 3sx6_A 314 TTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRK 347 (437)
T ss_dssp CCSSCCCCCCCHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1 789999999999999887653
No 79
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.97 E-value=9.8e-31 Score=248.64 Aligned_cols=341 Identities=18% Similarity=0.207 Sum_probs=207.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC--------------CCeEEEecCCCCCCCcCCCC-CCCeeeecC--Cccccc--CCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLS--------------VPNIILEREDCSASLWKKRA-YDRMKLHLA--KQFCEL--PHM 64 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g--------------~~v~lie~~~~~g~~~~~~~-~~~~~~~~~--~~~~~~--~~~ 64 (381)
+||+|||+||+||++|..|.+.+ ...+.+|+.+.++ |+..+ ++...++.+ +++..+ |..
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s 117 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPRS 117 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTTC
T ss_pred CcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCCC
Confidence 79999999999999999998753 3567788877665 66543 444444332 111111 110
Q ss_pred ---------------CCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCC------CeEEEEEeecCCCc
Q 035902 65 ---------------PFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENA------KAWIIVAKNTALDA 123 (381)
Q Consensus 65 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~------~~~~v~~~~~~~~~ 123 (381)
+++.....++++.++.+|+++++++++..++++++|+++...+.+ +.|+|++.++..++
T Consensus 118 ~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~ 197 (501)
T 4b63_A 118 SFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGE 197 (501)
T ss_dssp TTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCC
T ss_pred ccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCce
Confidence 112233457899999999999999998789999999999876533 35999999988888
Q ss_pred eEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCCCC------CCCCCCCeEEEEcCCCCHHHHHHHHhhC--CCee
Q 035902 124 YEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKYEN------GGKFIGKNVLVVGCGNSGMEIAYDLSSC--GACT 195 (381)
Q Consensus 124 ~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~~~------~~~~~~~~v~viG~G~~~~e~a~~l~~~--g~~v 195 (381)
...+.++.||+|||..|.+|.. ..+.++++|+..+.. ...+.+|+|+|||+|.||+|++..|++. +.+|
T Consensus 198 ~~~~~ar~vVlatG~~P~iP~~---~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v 274 (501)
T 4b63_A 198 ISARRTRKVVIAIGGTAKMPSG---LPQDPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAEIFHDLQKRYPNSRT 274 (501)
T ss_dssp EEEEEEEEEEECCCCEECCCTT---SCCCTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHHHHHHHHHHSTTCEE
T ss_pred EEEEEeCEEEECcCCCCCCCCC---CCCCcceeeccccccchhhccccccCCcEEEEECCcHHHHHHHHHHHhcCCCceE
Confidence 8899999999999987776654 445678999988764 4457899999999999999999999875 6789
Q ss_pred EEEEecCcceechhhHHHHHH--------HHhhCcHHHHHHHHHHHhhhhhcCcc------------ccCCCCCCCCCcc
Q 035902 196 SIVVRGPVHVLTREIVFAGML--------LLKFLPCKLVDFIVVMLSKMKFGNLF------------KYGLERPKKGPFY 255 (381)
Q Consensus 196 ~~i~r~~~~~~p~~~~~~~~~--------~~~~l~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~ 255 (381)
++++|++ ++.|.....+... .+..++...............++... +..+..+...+..
T Consensus 275 ~~~~R~~-~~~p~~~s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~~v~~~li~~i~~~~y~~~~~~~~~~~~~ 353 (501)
T 4b63_A 275 TLIMRDS-AMRPSDDSPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYSVVRLELIEEIYNDMYLQRVKNPDETQWQ 353 (501)
T ss_dssp EEECSSS-SCCBCCCCTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSSCBCHHHHHHHHHHHHHHHHHCSCGGGCS
T ss_pred EEEeCCC-ccccccccccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhcccCHHHHHHHHHHHHhhccCCCcccccc
Confidence 9999998 6666544322211 11112222222222111111111000 0000000000000
Q ss_pred cccccCCCccccchhhhhhcCCCeEEccCcceEeCCeEEEcCCcEeeccEEEEecCCCCCcchhccccCCcc--cccCCC
Q 035902 256 FKAITGQTPTIDVGAMDKIRKGEIQVFPSITSINRNEVEFENGKIEEFEAIIFATGYKSTVRNWLKRADKDF--FDEYGM 333 (381)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~--~~~~g~ 333 (381)
. .+.+...... .........+++...+.+++.+++.+.+|+++++|.||+||||+++.+.++. ..... .+.+|.
T Consensus 354 ~-~l~~~~~v~~--~~~~~~~~~~~v~~~~~~~~~~~v~~~dg~~~~~D~VI~ATGy~~~~p~~L~-~~~~~l~~d~~g~ 429 (501)
T 4b63_A 354 H-RILPERKITR--VEHHGPQSRMRIHLKSSKPESEGAANDVKETLEVDALMVATGYNRNAHERLL-SKVQHLRPTGQDQ 429 (501)
T ss_dssp S-EEECSEEEEE--EECCSSSSCEEEEEEESCC--------CCCEEEESEEEECCCEECCTHHHHT-GGGGGGSSTTCCS
T ss_pred e-eecCCcceee--eeecCCCCeEEEEeeeeEEeCCeeEeCCCeEEECCEEEECcCCCCCCcchhc-chhhhcCcCcCCC
Confidence 0 0000000000 0111122334443335556667888899999999999999999999876655 32222 456677
Q ss_pred CCCCCCCCC-------CCCCcEEEEecc
Q 035902 334 PKRNCPNHW-------KGENGLYCAGFS 354 (381)
Q Consensus 334 ~~~~~~~~~-------~~~~~ifa~Gd~ 354 (381)
+.++..... ...++||+.|-+
T Consensus 430 ~~v~rdy~~~~~~~~~~~~~~i~~qg~~ 457 (501)
T 4b63_A 430 WKPHRDYRVEMDPSKVSSEAGIWLQGCN 457 (501)
T ss_dssp CCBCTTSBBCCCTTTBCTTCEEEECSCC
T ss_pred eeeCCCcEEeecCCccCCCceEEecCCC
Confidence 766622211 234679999865
No 80
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.97 E-value=9.6e-33 Score=261.92 Aligned_cols=286 Identities=17% Similarity=0.171 Sum_probs=193.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
+++|||||||+||+++|..|++.+.+|+|||+++..- |. .+ ++.. .....+..++...
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~--~~-----Pl-------L~~v--------a~G~l~~~~i~~p 99 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFL--FT-----PL-------LPSA--------PVGTVDEKSIIEP 99 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEE--CG-----GG-------GGGT--------TTTSSCGGGGEEE
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcc--cc-----cc-------hhHH--------hhccccHHHhhhh
Confidence 3679999999999999999999999999999986210 00 00 0000 0011111222112
Q ss_pred HHHHHH--HhCCccccccEEEEEEEeCCCCeEEEEEeec---------------CCCceEEEEeCEEEEccCCCCCCCCC
Q 035902 83 VDNYVS--QMGINPRYHRSVESASYDENAKAWIIVAKNT---------------ALDAYEEYVARYLVVATGENGLIPEV 145 (381)
Q Consensus 83 ~~~~~~--~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~---------------~~~~~~~~~~d~vIlAtG~~~~~~~~ 145 (381)
+..... +.++++ ...+|++|+.+. +. |++.+. ...+..++.||+||||||+.|..+.+
T Consensus 100 ~~~~~~~~~~~v~~-~~~~v~~ID~~~--k~--V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~i 174 (502)
T 4g6h_A 100 IVNFALKKKGNVTY-YEAEATSINPDR--NT--VTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGI 174 (502)
T ss_dssp HHHHHTTCSSCEEE-EEEEEEEEEGGG--TE--EEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTC
T ss_pred HHHHHHhhcCCeEE-EEEEEEEEEhhh--CE--EEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCc
Confidence 222221 224443 345788888876 55 443321 11234689999999999999999999
Q ss_pred CCCCCCCcceeecCCCCCC-----------------CC-----CCCCeEEEEcCCCCHHHHHHHHhhCC-----------
Q 035902 146 PGLGSFEGEYMHSSKYENG-----------------GK-----FIGKNVLVVGCGNSGMEIAYDLSSCG----------- 192 (381)
Q Consensus 146 ~g~~~~~~~~~~~~~~~~~-----------------~~-----~~~~~v~viG~G~~~~e~a~~l~~~g----------- 192 (381)
||+++. .+......+. .. ....+++|||+|++|+|+|..|++.+
T Consensus 175 pG~~e~---a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~ 251 (502)
T 4g6h_A 175 PGVTDY---GHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPAL 251 (502)
T ss_dssp TTHHHH---CEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHH
T ss_pred cCcccc---cCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccc
Confidence 997542 1221111100 00 01347999999999999999988643
Q ss_pred ---CeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccch
Q 035902 193 ---ACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVG 269 (381)
Q Consensus 193 ---~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (381)
.+|+++.+.+ .++|..+.++...+.+
T Consensus 252 ~~~~~V~lve~~~-~il~~~~~~~~~~~~~-------------------------------------------------- 280 (502)
T 4g6h_A 252 AEEVQIHLVEALP-IVLNMFEKKLSSYAQS-------------------------------------------------- 280 (502)
T ss_dssp HHHCEEEEECSSS-SSSTTSCHHHHHHHHH--------------------------------------------------
T ss_pred cccceeEEecccc-ccccCCCHHHHHHHHH--------------------------------------------------
Confidence 5799999999 7778766655555444
Q ss_pred hhhhhcCCCeEEccC--cceEeCCeEEE----cCC----cEeeccEEEEecCCCCCcc--hhccccCCcc-cccCCCCCC
Q 035902 270 AMDKIRKGEIQVFPS--ITSINRNEVEF----ENG----KIEEFEAIIFATGYKSTVR--NWLKRADKDF-FDEYGMPKR 336 (381)
Q Consensus 270 ~~~~~~~~~v~~~~~--v~~v~~~~v~~----~~g----~~~~~D~vi~a~G~~p~~~--~~~~~~~~~~-~~~~g~~~~ 336 (381)
.+++.+|+++.+ |++++++++.+ +|| +++++|.+|||+|.+|++. .+.. . .+. .+..|++.|
T Consensus 281 ---~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~-~-~~~~~~~~g~I~V 355 (502)
T 4g6h_A 281 ---HLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFK-K-IPEQNSSKRGLAV 355 (502)
T ss_dssp ---HHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHH-H-SGGGTTCCSSEEB
T ss_pred ---HHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHH-h-ccccccCCCceeE
Confidence 446778999988 99999887654 345 3699999999999999852 2222 2 333 567889999
Q ss_pred CCCCCCC-CCCcEEEEeccccccc-----CccHHHHHHHHHhhhc
Q 035902 337 NCPNHWK-GENGLYCAGFSRTGLH-----GISIDAKNIANDINLA 375 (381)
Q Consensus 337 ~~~~~~~-~~~~ifa~Gd~~~~~~-----~a~~~a~~~a~~i~~~ 375 (381)
| +.+++ +.|||||+|||+..+. .|..||+.+|+||.+.
T Consensus 356 d-~~lq~~~~~~IfAiGD~a~~~~p~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 356 N-DFLQVKGSNNIFAIGDNAFAGLPPTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp C-TTSBBTTCSSEEECGGGEESSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred C-CccccCCCCCEEEEEcccCCCCCCchHHHHHHHHHHHHHHHHH
Confidence 9 45554 8899999999976532 8999999999999764
No 81
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.97 E-value=5.9e-31 Score=256.35 Aligned_cols=302 Identities=16% Similarity=0.184 Sum_probs=190.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecC-C-------CCCCCcCC-CCCCCeeeecC-------CcccccCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERE-D-------CSASLWKK-RAYDRMKLHLA-------KQFCELPHMPF 66 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~-~-------~~g~~~~~-~~~~~~~~~~~-------~~~~~~~~~~~ 66 (381)
++||+||||||||+++|..|++.|.+|+|||+. + .+||.|.. .+++...+... .....+ ....
T Consensus 107 ~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~-g~~~ 185 (598)
T 2x8g_A 107 DYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHF-GWSL 185 (598)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-TCCC
T ss_pred cccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhC-Cccc
Confidence 489999999999999999999999999999973 2 24443321 11111000000 000000 0111
Q ss_pred CCCCCCCCCHHHHHHHHHHHH-----------HHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEc
Q 035902 67 PSRTPTFVPRISFINYVDNYV-----------SQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVA 135 (381)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlA 135 (381)
+.. .......++.++++... +..+++++.+ ....++ . .. +...+. .++...+.||+||+|
T Consensus 186 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-~~~~~~--~--~~--v~v~~~-~g~~~~~~~d~lviA 256 (598)
T 2x8g_A 186 DRS-KISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNA-KGRLIS--P--HE--VQITDK-NQKVSTITGNKIILA 256 (598)
T ss_dssp CGG-GCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECS-EEEEEE--T--TE--EEEECT-TCCEEEEEEEEEEEC
T ss_pred cCC-cCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEE-EEEEcC--C--CE--EEEEeC-CCCeEEEEeCEEEEe
Confidence 000 01233445555544333 2334444322 222222 1 22 333321 122357999999999
Q ss_pred cCCCCCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHH
Q 035902 136 TGENGLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGM 215 (381)
Q Consensus 136 tG~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~ 215 (381)
||+.|..|++||.+.+ ..++.+.... ...+++++|||+|.+|+|+|..|++.|.+|+++.|. .++|..+.++..
T Consensus 257 tGs~p~~p~i~G~~~~---~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~--~~l~~~d~~~~~ 330 (598)
T 2x8g_A 257 TGERPKYPEIPGAVEY---GITSDDLFSL-PYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS--ILLRGFDQQMAE 330 (598)
T ss_dssp CCEEECCCSSTTHHHH---CEEHHHHTTC-SSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--CSSTTSCHHHHH
T ss_pred CCCCCCCCCCCCcccc---eEcHHHHhhC-ccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC--cCcCcCCHHHHH
Confidence 9999999988886432 2344333322 235789999999999999999999999999999987 455554444433
Q ss_pred HHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEe----
Q 035902 216 LLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSIN---- 289 (381)
Q Consensus 216 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~---- 289 (381)
.+. +.+++.+|+++.+ ++++.
T Consensus 331 ~~~-----------------------------------------------------~~l~~~gv~i~~~~~v~~v~~~~~ 357 (598)
T 2x8g_A 331 KVG-----------------------------------------------------DYMENHGVKFAKLCVPDEIKQLKV 357 (598)
T ss_dssp HHH-----------------------------------------------------HHHHHTTCEEEETEEEEEEEEEEC
T ss_pred HHH-----------------------------------------------------HHHHhCCCEEEECCeEEEEEeccc
Confidence 332 2334556676665 44442
Q ss_pred ----C---CeEE----EcCCcEee--ccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccc
Q 035902 290 ----R---NEVE----FENGKIEE--FEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSR 355 (381)
Q Consensus 290 ----~---~~v~----~~~g~~~~--~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~ 355 (381)
. +.+. +.+|++++ +|.|++|+|++|+++.+.. +..++ ++++|++.+| +.++|+.|||||+|||+
T Consensus 358 ~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~~~~l~~-~~~gl~~~~~G~i~vd-~~~~ts~~~VyA~GD~~ 435 (598)
T 2x8g_A 358 VDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQLSKVLC-ETVGVKLDKNGRVVCT-DDEQTTVSNVYAIGDIN 435 (598)
T ss_dssp CBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEECGGGTBC-GGGCCCBCTTSCBCCC-TTSBCSSTTEEECGGGB
T ss_pred cccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccccCccCc-hhcCceECCCCcEEeC-CCCcCCCCCEEEEeeec
Confidence 1 2232 35776555 9999999999999865422 33566 7788999999 45678999999999995
Q ss_pred cc-cc---CccHHHHHHHHHhhhc
Q 035902 356 TG-LH---GISIDAKNIANDINLA 375 (381)
Q Consensus 356 ~~-~~---~a~~~a~~~a~~i~~~ 375 (381)
.+ +. .|..||+.+|++|.+.
T Consensus 436 ~~~~~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 436 AGKPQLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCCccHHHHHHhHHHHHHHHhcC
Confidence 43 32 7899999999999864
No 82
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.97 E-value=5e-32 Score=254.19 Aligned_cols=291 Identities=16% Similarity=0.165 Sum_probs=193.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHh-C------CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNN-L------SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTF 73 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~-~------g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (381)
|+.+||+||||||||+++|..|++ . +.+|+|||+.+.++|.|+.... +.+
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~-----------------------p~~ 57 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA-----------------------PDH 57 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC-----------------------TTC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC-----------------------CCC
Confidence 778999999999999999999999 7 8999999999888776643210 223
Q ss_pred CCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC-CCCCCCCCCCCCC
Q 035902 74 VPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN-GLIPEVPGLGSFE 152 (381)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~-~~~~~~~g~~~~~ 152 (381)
+...++..++.+.+++.+++++.+..+ + .. |.+.++ .+.||+||+|||+. +..+++||.+ +.
T Consensus 58 ~~~~~~~~~~~~~~~~~~v~~~~~v~v------~--~~--v~~~~~------~~~~d~lViAtG~~~~~~~~ipG~~-~~ 120 (456)
T 1lqt_A 58 PKIKSISKQFEKTAEDPRFRFFGNVVV------G--EH--VQPGEL------SERYDAVIYAVGAQSDRMLNIPGED-LP 120 (456)
T ss_dssp TGGGGGHHHHHHHHTSTTEEEEESCCB------T--TT--BCHHHH------HHHSSEEEECCCCCEECCCCCTTTT-ST
T ss_pred CCHHHHHHHHHHHHhcCCCEEEeeEEE------C--CE--EEECCC------eEeCCEEEEeeCCCCCCCCCCCCCC-CC
Confidence 334567777777777778777666432 1 22 444332 47899999999998 7888899876 34
Q ss_pred cceeecCCC-----------CCCCCCCCCeEEEEcCCCCHHHHHHHHhhC--------------------C-CeeEEEEe
Q 035902 153 GEYMHSSKY-----------ENGGKFIGKNVLVVGCGNSGMEIAYDLSSC--------------------G-ACTSIVVR 200 (381)
Q Consensus 153 ~~~~~~~~~-----------~~~~~~~~~~v~viG~G~~~~e~a~~l~~~--------------------g-~~v~~i~r 200 (381)
+ +++..++ .+...+.+++++|||+|.+|+|+|..|++. + .+|+++.|
T Consensus 121 g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r 199 (456)
T 1lqt_A 121 G-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGR 199 (456)
T ss_dssp T-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECS
T ss_pred C-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEec
Confidence 3 4443221 122234689999999999999999999974 5 48999999
Q ss_pred cCcceechhhH-HHHHH---------------------HHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCccccc
Q 035902 201 GPVHVLTREIV-FAGML---------------------LLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKA 258 (381)
Q Consensus 201 ~~~~~~p~~~~-~~~~~---------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (381)
++ .+.+.+.. ++... ....++ .........
T Consensus 200 ~~-~~~~~f~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-------------------------- 251 (456)
T 1lqt_A 200 RG-PLQAAFTTLELRELADLDGVDVVIDPAELDGITDEDAAAVG-KVCKQNIKV-------------------------- 251 (456)
T ss_dssp SC-GGGCCCCHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHC-HHHHHHHHH--------------------------
T ss_pred CC-hhhhccChHHHHHhhcCCCceeeeChHHhccchhhhhhhcc-HHHHHHHHH--------------------------
Confidence 98 44332211 00000 000000 000000000
Q ss_pred ccCCCccccchhhhhhcC------CCeEEccC--cceEeCC----eEEEc----------------CC--cEeeccEEEE
Q 035902 259 ITGQTPTIDVGAMDKIRK------GEIQVFPS--ITSINRN----EVEFE----------------NG--KIEEFEAIIF 308 (381)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~------~~v~~~~~--v~~v~~~----~v~~~----------------~g--~~~~~D~vi~ 308 (381)
+.+.+++ .+|+++.+ +.++.++ ++.++ +| ++++||.||+
T Consensus 252 -----------l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~ 320 (456)
T 1lqt_A 252 -----------LRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVR 320 (456)
T ss_dssp -----------HHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEE
T ss_pred -----------HHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEE
Confidence 0111122 56777776 6666553 25553 34 4689999999
Q ss_pred ecCCCCCcchhccccCCcccccCCCCCCCCCCCC-CCCCcEEEEeccccccc----CccHHHHHHHHHhhhcccc
Q 035902 309 ATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHW-KGENGLYCAGFSRTGLH----GISIDAKNIANDINLALTD 378 (381)
Q Consensus 309 a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~ifa~Gd~~~~~~----~a~~~a~~~a~~i~~~l~~ 378 (381)
|+|++|++. . + .. ++++|.+.+| +..+ ++.||||++|||..++. .|+.+|..+|++|...+..
T Consensus 321 a~G~~p~~l---~-g-l~-~d~~g~i~vn-~~~rvt~~pgvya~GD~~~gp~~~i~~a~~~g~~~a~~i~~~l~~ 388 (456)
T 1lqt_A 321 SVGYRGVPT---P-G-LP-FDDQSGTIPN-VGGRINGSPNEYVVGWIKRGPTGVIGTNKKDAQDTVDTLIKNLGN 388 (456)
T ss_dssp CSCEECCCC---T-T-SC-CBTTTTBCCE-ETTEETTCSSEEECTHHHHCSCSCTTHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCC---C-C-Cc-ccCCCCeeEC-CCCcCCCCCCEEEEeccCCCCchhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999971 2 1 11 5677888887 3344 78999999999986544 5889999999999987753
No 83
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.97 E-value=1.1e-30 Score=267.07 Aligned_cols=277 Identities=17% Similarity=0.232 Sum_probs=188.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV-PNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
.+||+||||||||+++|..|++.|+ +|+|||+.+.+||.+... .+. +....++.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~---------------ip~---------~~~~~~~~~ 242 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE---------------IPQ---------FRLPYDVVN 242 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT---------------SCT---------TTSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc---------------CCc---------ccCCHHHHH
Confidence 3789999999999999999999999 799999998888754221 111 111235666
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC-CCCCCC-CCCCCCCcceeecC
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN-GLIPEV-PGLGSFEGEYMHSS 159 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~-~~~~~~-~g~~~~~~~~~~~~ 159 (381)
+..+++++.++++++++.+.. .. +++.++ ..+.||+||+|||+. |..+++ +|++...+ +++..
T Consensus 243 ~~~~~~~~~gv~~~~~~~v~~-------~~--v~~~~~-----~~~~~d~vvlAtGa~~p~~l~~~~G~~~~~g-v~~a~ 307 (1025)
T 1gte_A 243 FEIELMKDLGVKIICGKSLSE-------NE--ITLNTL-----KEEGYKAAFIGIGLPEPKTDDIFQGLTQDQG-FYTSK 307 (1025)
T ss_dssp HHHHHHHTTTCEEEESCCBST-------TS--BCHHHH-----HHTTCCEEEECCCCCEECCCGGGTTCCTTTT-EEEHH
T ss_pred HHHHHHHHCCcEEEcccEecc-------ce--EEhhhc-----CccCCCEEEEecCCCCCCCCCCCCCCCCCCC-EEEhH
Confidence 666777888998887776521 11 333332 346799999999995 776554 45543222 33322
Q ss_pred CCC--------------C-CCCCCCCeEEEEcCCCCHHHHHHHHhhCCC-eeEEEEecCcceechhhHHHHHHHHhhCcH
Q 035902 160 KYE--------------N-GGKFIGKNVLVVGCGNSGMEIAYDLSSCGA-CTSIVVRGPVHVLTREIVFAGMLLLKFLPC 223 (381)
Q Consensus 160 ~~~--------------~-~~~~~~~~v~viG~G~~~~e~a~~l~~~g~-~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~ 223 (381)
++. . .....+++++|||||.+|+|+|..+.++|. +|++++|++...+|..+.++
T Consensus 308 ~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~e~---------- 377 (1025)
T 1gte_A 308 DFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPEEV---------- 377 (1025)
T ss_dssp HHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHHHH----------
T ss_pred HHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHHHH----------
Confidence 211 1 112246799999999999999999999996 89999998843444333221
Q ss_pred HHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC--Ce---EEEc
Q 035902 224 KLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR--NE---VEFE 296 (381)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~--~~---v~~~ 296 (381)
+.+++.+++++.. +.++.. +. +.+.
T Consensus 378 ------------------------------------------------~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~ 409 (1025)
T 1gte_A 378 ------------------------------------------------ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFV 409 (1025)
T ss_dssp ------------------------------------------------HHHHHTTCEEECSEEEEEEEEETTEEEEEEEE
T ss_pred ------------------------------------------------HHHHHcCCEEEeCCCceEEEccCCeEEEEEEE
Confidence 1122234444333 333321 11 2111
Q ss_pred -------------CC--cEeeccEEEEecCCCCCcchhccccCCcc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc-
Q 035902 297 -------------NG--KIEEFEAIIFATGYKSTVRNWLKRADKDF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH- 359 (381)
Q Consensus 297 -------------~g--~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~- 359 (381)
+| +++++|.||+|+|++|+...++. +..++ ++++|++.+|...++|+.|+|||+||+++++.
T Consensus 410 ~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~-~~~gl~~~~~G~I~vd~~~~~Ts~~~VfA~GD~~~~~~~ 488 (1025)
T 1gte_A 410 RTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKE-ALSPIKFNRWDLPEVDPETMQTSEPWVFAGGDIVGMANT 488 (1025)
T ss_dssp EEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHH-HTTTSCBCTTSSBCCCTTTCBCSSTTEEECSGGGCSCCC
T ss_pred EeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhh-cccCceECCCCCEEECCCCCccCCCCEEEeCCCCCCchH
Confidence 12 47899999999999876545554 43456 77889999994357789999999999998654
Q ss_pred --CccHHHHHHHHHhhhccc
Q 035902 360 --GISIDAKNIANDINLALT 377 (381)
Q Consensus 360 --~a~~~a~~~a~~i~~~l~ 377 (381)
.|+.||+.+|++|.++|.
T Consensus 489 ~~~A~~~G~~aA~~i~~~L~ 508 (1025)
T 1gte_A 489 TVESVNDGKQASWYIHKYIQ 508 (1025)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 899999999999998764
No 84
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.97 E-value=2.7e-31 Score=252.28 Aligned_cols=301 Identities=15% Similarity=0.215 Sum_probs=192.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCCCcCCCCCCCeeeec--C-----CcccccCCC----CCCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSASLWKKRAYDRMKLHL--A-----KQFCELPHM----PFPS 68 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~--~-----~~~~~~~~~----~~~~ 68 (381)
+++||+|||||+||++||..|++. +.+|+|||+++.++. ......+..... + ..+..+... .+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y--~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY--MRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB--CSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC--CCCCCCHHhhcCCccchhhcccccccccccccccccc
Confidence 458999999999999999999887 789999999976642 111000000000 0 000000000 0000
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCC
Q 035902 69 RTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGL 148 (381)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~ 148 (381)
...+....++.+ ..+.+++++++++|.+++... . .|.+.++ ..+.||+||+|||+.|..|++++.
T Consensus 88 -~~~~~~~~~l~~-----~~~~gv~~~~g~~v~~id~~~--~--~V~~~~g-----~~i~yd~lviATGs~p~~~~~~~~ 152 (493)
T 1m6i_A 88 -PSFYVSAQDLPH-----IENGGVAVLTGKKVVQLDVRD--N--MVKLNDG-----SQITYEKCLIATGGTPRSLSAIDR 152 (493)
T ss_dssp -GGGSBCTTTTTT-----STTCEEEEEETCCEEEEEGGG--T--EEEETTS-----CEEEEEEEEECCCEEECCCHHHHT
T ss_pred -hHhhcchhhhhh-----hhcCCeEEEcCCEEEEEECCC--C--EEEECCC-----CEEECCEEEECCCCCCCCCCCccc
Confidence 000111111110 123577888888999998754 3 3777765 579999999999999887665442
Q ss_pred C--CCCcceeecCCCCCC-----CCCCCCeEEEEcCCCCHHHHHHHHhh----CCCeeEEEEecCcceechhhHHHHHHH
Q 035902 149 G--SFEGEYMHSSKYENG-----GKFIGKNVLVVGCGNSGMEIAYDLSS----CGACTSIVVRGPVHVLTREIVFAGMLL 217 (381)
Q Consensus 149 ~--~~~~~~~~~~~~~~~-----~~~~~~~v~viG~G~~~~e~a~~l~~----~g~~v~~i~r~~~~~~p~~~~~~~~~~ 217 (381)
. .+...+.......+. ....+++++|||+|.+|+|+|..|++ .|.+|+++.+.+ .++++.
T Consensus 153 ~~~~~~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~-~~~~~~-------- 223 (493)
T 1m6i_A 153 AGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK-GNMGKI-------- 223 (493)
T ss_dssp SCHHHHHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS-STTTTT--------
T ss_pred ccccccCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc-cccccc--------
Confidence 1 111112222221110 01248999999999999999999987 467899998876 222211
Q ss_pred HhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC--C--
Q 035902 218 LKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR--N-- 291 (381)
Q Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~--~-- 291 (381)
++.. +...+.+.+++.+|+++.+ |++++. +
T Consensus 224 ---l~~~-----------------------------------------~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~ 259 (493)
T 1m6i_A 224 ---LPEY-----------------------------------------LSNWTMEKVRREGVKVMPNAIVQSVGVSSGKL 259 (493)
T ss_dssp ---SCHH-----------------------------------------HHHHHHHHHHTTTCEEECSCCEEEEEEETTEE
T ss_pred ---CCHH-----------------------------------------HHHHHHHHHHhcCCEEEeCCEEEEEEecCCeE
Confidence 1110 1111245567788999887 888753 2
Q ss_pred eEEEcCCcEeeccEEEEecCCCCCcchhccccCCcc-ccc-CCCCCCCCCCCCCCCCcEEEEecccccc----------c
Q 035902 292 EVEFENGKIEEFEAIIFATGYKSTVRNWLKRADKDF-FDE-YGMPKRNCPNHWKGENGLYCAGFSRTGL----------H 359 (381)
Q Consensus 292 ~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~-~~~-~g~~~~~~~~~~~~~~~ifa~Gd~~~~~----------~ 359 (381)
.+.+.+|+++++|.||+|+|.+|+++ ++. . .++ +++ +|.+.+| +.+++ .|||||+|||+..+ .
T Consensus 260 ~v~l~dG~~i~aD~Vv~a~G~~pn~~-l~~-~-~gl~~~~~~ggi~Vd-~~l~t-~~~IyA~GD~a~~~~~~~g~~~~~~ 334 (493)
T 1m6i_A 260 LIKLKDGRKVETDHIVAAVGLEPNVE-LAK-T-GGLEIDSDFGGFRVN-AELQA-RSNIWVAGDAACFYDIKLGRRRVEH 334 (493)
T ss_dssp EEEETTSCEEEESEEEECCCEEECCT-THH-H-HTCCBCTTTCSEECC-TTCEE-ETTEEECGGGEEEEETTTEEECCCC
T ss_pred EEEECCCCEEECCEEEECCCCCccHH-HHH-H-cCCccccCCCcEEEC-CCccc-CCCeeEeeeeEeccCcccCccccch
Confidence 46778999999999999999999986 333 2 455 554 5788888 34444 69999999997632 1
Q ss_pred --CccHHHHHHHHHhhhccc
Q 035902 360 --GISIDAKNIANDINLALT 377 (381)
Q Consensus 360 --~a~~~a~~~a~~i~~~l~ 377 (381)
.|..||+.+|+||.+...
T Consensus 335 ~~~A~~qg~~aa~ni~g~~~ 354 (493)
T 1m6i_A 335 HDHAVVSGRLAGENMTGAAK 354 (493)
T ss_dssp HHHHHHHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHHHHHhcCCCC
Confidence 689999999999987543
No 85
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.96 E-value=3.2e-30 Score=242.15 Aligned_cols=305 Identities=15% Similarity=0.115 Sum_probs=190.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC--CCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLS--VPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g--~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
.+||+|||||++|+++|..|++.| .+|+|||+.+.++|.|+.... +.++...++.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~~~ 62 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKNVI 62 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGGHH
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHHHH
Confidence 378999999999999999999998 899999999888776643211 1122334567
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCC-CCCCCCCCCCCCcceeecC
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENG-LIPEVPGLGSFEGEYMHSS 159 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~-~~~~~~g~~~~~~~~~~~~ 159 (381)
.++.+.+++++++++.++.+. .. |.+.+ ..+.||+||+|||+.+ ..|++||.+ ..+ +++..
T Consensus 63 ~~~~~~~~~~gv~~~~~~~v~--------~~--V~~~~------~~~~~d~lVlAtGs~~~~~~~ipG~~-~~g-v~~~~ 124 (460)
T 1cjc_A 63 NTFTQTARSDRCAFYGNVEVG--------RD--VTVQE------LQDAYHAVVLSYGAEDHQALDIPGEE-LPG-VFSAR 124 (460)
T ss_dssp HHHHHHHTSTTEEEEBSCCBT--------TT--BCHHH------HHHHSSEEEECCCCCEECCCCCTTTT-STT-EEEHH
T ss_pred HHHHHHHHhCCcEEEeeeEEe--------eE--EEecc------ceEEcCEEEEecCcCCCCCCCCCCCC-CCc-EEEHH
Confidence 777778887888877776541 11 33332 2368999999999994 778899875 233 34332
Q ss_pred CC----------CCCC-CCCCCeEEEEcCCCCHHHHHHHHh--------------------hCCC-eeEEEEecCcceec
Q 035902 160 KY----------ENGG-KFIGKNVLVVGCGNSGMEIAYDLS--------------------SCGA-CTSIVVRGPVHVLT 207 (381)
Q Consensus 160 ~~----------~~~~-~~~~~~v~viG~G~~~~e~a~~l~--------------------~~g~-~v~~i~r~~~~~~p 207 (381)
++ .... .+.+++++|||+|.+|+|+|..|+ +.+. +|+++.|++....+
T Consensus 125 ~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ 204 (460)
T 1cjc_A 125 AFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVA 204 (460)
T ss_dssp HHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCC
T ss_pred HHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhc
Confidence 22 1111 235899999999999999999999 5676 79999999832121
Q ss_pred hhhHHHHHHH--------------------HhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCcccc
Q 035902 208 REIVFAGMLL--------------------LKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTID 267 (381)
Q Consensus 208 ~~~~~~~~~~--------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (381)
....++.... ...++. ..........+........++..
T Consensus 205 ft~~el~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~-------------------- 263 (460)
T 1cjc_A 205 FTIKELREMIQLPGTRPMLDPADFLGLQDRIKEAAR-PRKRLMELLLRTATEKPGVEEAA-------------------- 263 (460)
T ss_dssp CCHHHHHHHHTCTTEEEECCGGGGTTHHHHTTTSCH-HHHHHHHHHHHHHHSCCCHHHHH--------------------
T ss_pred cCHHHHHHhhcCCCceeEechhhhcchhhhhhhccH-HHHHHHHHHHHHHHhcccccccc--------------------
Confidence 1111111100 000000 00000000000000000000000
Q ss_pred chhhhhhcCCCeEEccC--cceEeCC-------eEEEc---------------CC--cEeeccEEEEecCCCCCcchhcc
Q 035902 268 VGAMDKIRKGEIQVFPS--ITSINRN-------EVEFE---------------NG--KIEEFEAIIFATGYKSTVRNWLK 321 (381)
Q Consensus 268 ~~~~~~~~~~~v~~~~~--v~~v~~~-------~v~~~---------------~g--~~~~~D~vi~a~G~~p~~~~~~~ 321 (381)
.......+|+++.. +.++.++ ++.+. +| ++++||.||+++|++|++. .
T Consensus 264 ---~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l---~ 337 (460)
T 1cjc_A 264 ---RRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI---D 337 (460)
T ss_dssp ---HHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC---C
T ss_pred ---CCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCC---C
Confidence 00011256777766 6666432 24432 34 5799999999999999972 2
Q ss_pred ccCCcccccCCCCCCCCCCCCCC-CCcEEEEeccccccc----CccHHHHHHHHHhhhcccc
Q 035902 322 RADKDFFDEYGMPKRNCPNHWKG-ENGLYCAGFSRTGLH----GISIDAKNIANDINLALTD 378 (381)
Q Consensus 322 ~~~~~~~~~~g~~~~~~~~~~~~-~~~ifa~Gd~~~~~~----~a~~~a~~~a~~i~~~l~~ 378 (381)
+ ..-++++|.+.+| +..+++ .|+|||+|||..++. .|+.+|..+|++|...+..
T Consensus 338 -g-l~~~d~~g~i~vn-~~~rt~~~p~vya~Gd~~~g~~~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 338 -P-SVPFDPKLGVVPN-MEGRVVDVPGLYCSGWVKRGPTGVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp -T-TSCCBTTTTBCCE-ETTEETTCTTEEECTHHHHCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -C-CcccccCCCeeEC-CCCcCcCCCCEEEEEeCCcCCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 2 2025667888888 455666 699999999987544 6889999999999988754
No 86
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.96 E-value=3.2e-30 Score=254.46 Aligned_cols=266 Identities=15% Similarity=0.119 Sum_probs=196.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
++||+|||||++|+++|+.|+++|.+|+|||+++.+||.|.... ..+......++.++
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~----------------------~~p~~~~~~~~~~~ 448 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQES----------------------ALPGLSAWGRVKEY 448 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHH----------------------TSTTCGGGGHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeecc----------------------CCCchhHHHHHHHH
Confidence 37999999999999999999999999999999998888654210 01222234577888
Q ss_pred HHHHHHHh-CCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC--------CCCCCCCCCCCCCc
Q 035902 83 VDNYVSQM-GINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN--------GLIPEVPGLGSFEG 153 (381)
Q Consensus 83 ~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~--------~~~~~~~g~~~~~~ 153 (381)
+...++++ ++++++++++ ...+. ..+.||+||+|||+. |..|.++|.+. .
T Consensus 449 ~~~~~~~~~gv~~~~~~~v--------------~~~~~-----~~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~--~ 507 (690)
T 3k30_A 449 REAVLAELPNVEIYRESPM--------------TGDDI-----VEFGFEHVITATGATWRTDGVARFHTTALPIAEG--M 507 (690)
T ss_dssp HHHHHHTCTTEEEESSCCC--------------CHHHH-----HHTTCCEEEECCCEEECSSCCSSSCSSCCCBCTT--S
T ss_pred HHHHHHHcCCCEEEECCee--------------cHHHH-----hhcCCCEEEEcCCCccccccccccCCCCCCCCCC--C
Confidence 88888876 7777666433 11121 457899999999998 44677888763 3
Q ss_pred ceeecCCCCCCCCCCCCeEEEEc--CCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHH
Q 035902 154 EYMHSSKYENGGKFIGKNVLVVG--CGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVV 231 (381)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~v~viG--~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~ 231 (381)
.+++..++.......+++++||| +|.+|+|+|..|.+.|.+|+++.+.+ .+++.....
T Consensus 508 ~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~-~l~~~~~~~------------------- 567 (690)
T 3k30_A 508 QVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA-QVSSWTNNT------------------- 567 (690)
T ss_dssp EEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS-STTGGGGGG-------------------
T ss_pred cEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc-ccccccccc-------------------
Confidence 45666555555455678999999 99999999999999999999999988 443332110
Q ss_pred HHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCeEEEc-----CCcEeecc
Q 035902 232 MLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNEVEFE-----NGKIEEFE 304 (381)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~v~~~-----~g~~~~~D 304 (381)
.....+.+.+++.+|+++.+ |++++.+++.+. +++++++|
T Consensus 568 ---------------------------------~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD 614 (690)
T 3k30_A 568 ---------------------------------FEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECD 614 (690)
T ss_dssp ---------------------------------TCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECS
T ss_pred ---------------------------------hhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECC
Confidence 01112355567789999988 999988876553 45689999
Q ss_pred EEEEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEeccccccc--CccHHHHHHHHHhhhcccc
Q 035902 305 AIIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH--GISIDAKNIANDINLALTD 378 (381)
Q Consensus 305 ~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~--~a~~~a~~~a~~i~~~l~~ 378 (381)
.||+|+|++|+...+.. .+ ..+. .++.|+||++|||..... .|..||..+|++|.+.|..
T Consensus 615 ~VV~A~G~~p~~~l~~~---l~---~~~~--------~t~~~~VyaiGD~~~~~~~~~A~~~g~~aa~~i~~~l~g 676 (690)
T 3k30_A 615 AVVMVTARLPREELYLD---LV---ARRD--------AGEIASVRGIGDAWAPGTIAAAVWSGRRAAEEFDAVLPS 676 (690)
T ss_dssp EEEEESCEEECCHHHHH---HH---HHHH--------HTSCSEEEECGGGTSCBCHHHHHHHHHHHHHHTTCCCCC
T ss_pred EEEECCCCCCChHHHHH---Hh---hhhc--------ccCCCCEEEEeCCCchhhHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999863322 11 1111 456789999999988655 8999999999999998754
No 87
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.96 E-value=1.3e-30 Score=244.07 Aligned_cols=288 Identities=15% Similarity=0.133 Sum_probs=189.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHh--CCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHH
Q 035902 2 EEVPVVIVGAGPAGLATSACLNN--LSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISF 79 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~--~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (381)
..+||+|||||++|+++|..|++ .|.+|+|||+++..+...... ... .......++
T Consensus 1 M~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~--------------~~~--------~g~~~~~~~ 58 (430)
T 3h28_A 1 MAKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFP--------------HLA--------MGWRKFEDI 58 (430)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHH--------------HHH--------HTCSCGGGS
T ss_pred CCCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcc--------------hhc--------cCccCHHHH
Confidence 03799999999999999999999 789999999987544211000 000 000111122
Q ss_pred HHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecC
Q 035902 80 INYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSS 159 (381)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~ 159 (381)
...+.+.+++.+++++. .+++.++.+. .. |.+.++ ..+.||+||+|||+.+..| |+.. .+...+.+
T Consensus 59 ~~~~~~~~~~~gv~~~~-~~v~~id~~~--~~--v~~~~g-----~~i~~d~liiAtG~~~~~p---g~~~-~g~~~~~~ 124 (430)
T 3h28_A 59 SVPLAPLLPKFNIEFIN-EKAESIDPDA--NT--VTTQSG-----KKIEYDYLVIATGPKLVFG---AEGQ-EENSTSIC 124 (430)
T ss_dssp EEESTTTGGGGTEEEEC-SCEEEEETTT--TE--EEETTC-----CEEECSEEEECCCCEEECC---SBTH-HHHSCCCS
T ss_pred HHHHHHHHHhcCCEEEE-EEEEEEECCC--CE--EEECCC-----cEEECCEEEEcCCcccccC---CCCC-cCCccCcC
Confidence 22223344556888765 4788887654 33 777665 5799999999999997765 3321 11111111
Q ss_pred CCCCCCC--------CCCCeEEEEcCCCCH------HHHHHHH----hhCC----CeeEEEEecCcceechhhHHHHHHH
Q 035902 160 KYENGGK--------FIGKNVLVVGCGNSG------MEIAYDL----SSCG----ACTSIVVRGPVHVLTREIVFAGMLL 217 (381)
Q Consensus 160 ~~~~~~~--------~~~~~v~viG~G~~~------~e~a~~l----~~~g----~~v~~i~r~~~~~~p~~~~~~~~~~ 217 (381)
...+... ..+++++|||+|.+| +|+|..+ .+.| .+|+++.+.+ .+.+....
T Consensus 125 ~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~-~~~~~~l~------ 197 (430)
T 3h28_A 125 TAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLGHFGVG------ 197 (430)
T ss_dssp SHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STTCTTTT------
T ss_pred CHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCc-cccccccC------
Confidence 1111111 014567889987654 8887544 4556 4788888776 22110000
Q ss_pred HhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCeEEE
Q 035902 218 LKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNEVEF 295 (381)
Q Consensus 218 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~v~~ 295 (381)
..+.....+.+.+++.+|+++.+ |++++.+++.+
T Consensus 198 --------------------------------------------~~~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~~ 233 (430)
T 3h28_A 198 --------------------------------------------GIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVIY 233 (430)
T ss_dssp --------------------------------------------CSTTHHHHHHHHHHHTTCEEECSCEEEEECSSEEEE
T ss_pred --------------------------------------------cchHHHHHHHHHHHHCCCEEEeCCEEEEEeCCeEEE
Confidence 00111222356667889999988 99999988888
Q ss_pred cC----CcEeeccEEEEecCCCCCcchhccccC-CcccccCC-CCCCCCCCCCC-CCCcEEEEecccccc----------
Q 035902 296 EN----GKIEEFEAIIFATGYKSTVRNWLKRAD-KDFFDEYG-MPKRNCPNHWK-GENGLYCAGFSRTGL---------- 358 (381)
Q Consensus 296 ~~----g~~~~~D~vi~a~G~~p~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~-~~~~ifa~Gd~~~~~---------- 358 (381)
++ ++++++|.+++++|++|+. ++. +. .++.+++| ++.+|. ..++ +.||||++|||++.+
T Consensus 234 ~~~~~~g~~i~~D~vv~a~G~~~~~--~l~-~~~~gl~~~~G~~i~Vd~-~l~t~~~~~Ifa~GD~~~~~~~~~~~~~~~ 309 (430)
T 3h28_A 234 EDLNGNTHEVPAKFTMFMPSFQGPE--VVA-SAGDKVANPANKMVIVNR-CFQNPTYKNIFGVGVVTAIPPIEKTPIPTG 309 (430)
T ss_dssp ECTTSCEEEEECSEEEEECEEECCH--HHH-TTCTTTBCTTTCCBCCCT-TSBCSSSTTEEECSTTBCCCCSSCCSSCCC
T ss_pred EecCCCceEEeeeEEEECCCCccch--hHh-hccccCcCCCCCEEecCc-cccCCCCCCEEEEEeeeccCCccCCCCCCC
Confidence 87 7899999999999999875 344 32 46688899 999994 4555 899999999998742
Q ss_pred -----cCccHHHHHHHHHhhhccccCC
Q 035902 359 -----HGISIDAKNIANDINLALTDHQ 380 (381)
Q Consensus 359 -----~~a~~~a~~~a~~i~~~l~~~~ 380 (381)
..|..||+.+|+||...|+...
T Consensus 310 ~pk~~~~A~~~g~~aa~ni~~~l~g~~ 336 (430)
T 3h28_A 310 VPKTGMMIEQMAMAVAHNIVNDIRNNP 336 (430)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1799999999999999987653
No 88
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.96 E-value=1.4e-28 Score=250.02 Aligned_cols=279 Identities=16% Similarity=0.172 Sum_probs=192.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
++||+|||||+||+++|..|++.|.+|+|||+++.+||.+.. . +... + +. ....++...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~-~k~~---------i---------~~-~~~~~~~~~ 186 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-T-AGEQ---------I---------DG-MDSSAWIEQ 186 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-S-SCCE---------E---------TT-EEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-C-Cccc---------c---------CC-CCHHHHHHH
Confidence 479999999999999999999999999999999888886652 1 1000 0 00 113345555
Q ss_pred HHHHHHHh-CCccccccEEEEEEEeCCCCeEEEEEeec-C---------CCceEEEEeCEEEEccCCCCCCCCCCCCCCC
Q 035902 83 VDNYVSQM-GINPRYHRSVESASYDENAKAWIIVAKNT-A---------LDAYEEYVARYLVVATGENGLIPEVPGLGSF 151 (381)
Q Consensus 83 ~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~~v~~~~~-~---------~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~ 151 (381)
+.+.+.++ +++++.+++|.++.... ....+..... . ......+.||+||+|||+.|..|++||.+.
T Consensus 187 ~~~~l~~~~~v~~~~~~~V~~i~~~~--~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~- 263 (965)
T 2gag_A 187 VTSELAEAEETTHLQRTTVFGSYDAN--YLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDR- 263 (965)
T ss_dssp HHHHHHHSTTEEEESSEEEEEEETTT--EEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCS-
T ss_pred HHHHHhhcCCcEEEeCCEEEeeecCC--ceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCC-
Confidence 55555554 88888898998886432 1111110000 0 011247999999999999998888988764
Q ss_pred CcceeecCC---CCCC-CCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHH
Q 035902 152 EGEYMHSSK---YENG-GKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVD 227 (381)
Q Consensus 152 ~~~~~~~~~---~~~~-~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~ 227 (381)
++ +++... +... ....+++++|||+|.+|+|+|..|.+.|.+|+++.+++ .+.+.
T Consensus 264 ~g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~-~~~~~------------------- 322 (965)
T 2gag_A 264 PG-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARS-SISAA------------------- 322 (965)
T ss_dssp TT-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS-SCCHH-------------------
T ss_pred CC-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC-ccchh-------------------
Confidence 33 444321 1111 22356899999999999999999999999999999987 33221
Q ss_pred HHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC--C----eEEEcC--
Q 035902 228 FIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR--N----EVEFEN-- 297 (381)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~--~----~v~~~~-- 297 (381)
.+.+++.+|+++.+ +.++.. + ++.+.+
T Consensus 323 -------------------------------------------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~ 359 (965)
T 2gag_A 323 -------------------------------------------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELD 359 (965)
T ss_dssp -------------------------------------------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEEC
T ss_pred -------------------------------------------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEecc
Confidence 12234567777777 777764 2 466654
Q ss_pred -----C--cEeeccEEEEecCCCCCcchhccccCCcccccCCCCCCCCCCC----CCCCCcEEEEeccccccc--CccHH
Q 035902 298 -----G--KIEEFEAIIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNH----WKGENGLYCAGFSRTGLH--GISID 364 (381)
Q Consensus 298 -----g--~~~~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~ifa~Gd~~~~~~--~a~~~ 364 (381)
| +++++|.|++++|++|++..+.. . .|.+.+|.... .++.|+||++|||++... .|..|
T Consensus 360 ~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~-~-------~g~i~vd~~~~~~v~~ts~p~IyAaGD~a~~~~l~~A~~~ 431 (965)
T 2gag_A 360 EARELGGTQRFEADVLAVAGGFNPVVHLHSQ-R-------QGKLDWDTTIHAFVPADAVANQHLAGAMTGRLDTASALST 431 (965)
T ss_dssp TTCCEEEEEEEECSEEEEECCEEECCHHHHH-T-------TCCEEEETTTTEEEECSCCTTEEECGGGGTCCSHHHHHHH
T ss_pred ccCCCCceEEEEcCEEEECCCcCcChHHHHh-C-------CCcEEEcCcccccccCCCCCCEEEEEecCCchhHHHHHHH
Confidence 4 68999999999999999864333 2 23344441111 267899999999987655 88899
Q ss_pred HHHHHHHhhhccc
Q 035902 365 AKNIANDINLALT 377 (381)
Q Consensus 365 a~~~a~~i~~~l~ 377 (381)
|+.+|.+|.+.+.
T Consensus 432 G~~aA~~i~~~lg 444 (965)
T 2gag_A 432 GAATGAAAATAAG 444 (965)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC
Confidence 9999999988763
No 89
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.96 E-value=1.4e-29 Score=250.76 Aligned_cols=277 Identities=18% Similarity=0.218 Sum_probs=187.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.+||+|||||+||+++|..|+++|++|+|||+++.+||.|.... . .+.......+.++
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~----------------~------~pg~~~~~~~~~~ 446 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVA----------------A------LPGLGEWSYHRDY 446 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHT----------------T------STTCGGGHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecc----------------c------CCChHHHHHHHHH
Confidence 37999999999999999999999999999999998888664310 0 0111122345555
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC--------CCCCCCCCCCCCCcc
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN--------GLIPEVPGLGSFEGE 154 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~--------~~~~~~~g~~~~~~~ 154 (381)
++..++... ..+..+..+.. + .. +.+.++ ..+.||+||+|||+. |..|++||.+.+...
T Consensus 447 ~~~~i~~~~---~~~~~~v~i~~-~--~~--v~~~~~-----~~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~ 513 (729)
T 1o94_A 447 RETQITKLL---KKNKESQLALG-Q--KP--MTADDV-----LQYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPD 513 (729)
T ss_dssp HHHHHHHHH---HHSTTCEEECS-C--CC--CCHHHH-----HTSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTT
T ss_pred HHHHHHHhh---cccCCceEEEe-C--eE--Eehhhc-----cccCCCEEEEcCCCCcccccccCccCCCCCCccccCCC
Confidence 555444330 00111111211 0 11 333332 357899999999998 466778887744444
Q ss_pred eeecCCCCCCCCCCCCeEEEEc--CCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHH
Q 035902 155 YMHSSKYENGGKFIGKNVLVVG--CGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVM 232 (381)
Q Consensus 155 ~~~~~~~~~~~~~~~~~v~viG--~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~ 232 (381)
+++..++.......+++++||| +|.+|+|+|..|++.|.+|++++|.+ +++....+.
T Consensus 514 v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~--l~~~~~~~~------------------- 572 (729)
T 1o94_A 514 QLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH--LANYMHFTL------------------- 572 (729)
T ss_dssp EECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC--TTHHHHHTT-------------------
T ss_pred EEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc--ccccccccc-------------------
Confidence 6666555444444678999999 99999999999999999999999887 323210000
Q ss_pred HhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCeEEEc----CC-cE-----
Q 035902 233 LSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNEVEFE----NG-KI----- 300 (381)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~v~~~----~g-~~----- 300 (381)
....+.+.+++.+|+++.+ ++++..+++.+. ++ +.
T Consensus 573 ---------------------------------~~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~ 619 (729)
T 1o94_A 573 ---------------------------------EYPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGP 619 (729)
T ss_dssp ---------------------------------CHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCT
T ss_pred ---------------------------------cHHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccc
Confidence 0011244556778888888 888887765442 33 33
Q ss_pred -------------eeccEEEEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEeccccccc--CccHHH
Q 035902 301 -------------EEFEAIIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH--GISIDA 365 (381)
Q Consensus 301 -------------~~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~--~a~~~a 365 (381)
+++|.||+|+|.+|+... +. + .+. .++ +.++++.|+||++|||..... .|+.||
T Consensus 620 ~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l-~~-~-l~~-------~vd-~~~~t~~~~VyAiGD~~~~~~~~~A~~~G 688 (729)
T 1o94_A 620 GVSPRDANTSHRWIEFDSLVLVTGRHSECTL-WN-E-LKA-------RES-EWAENDIKGIYLIGDAEAPRLIADATFTG 688 (729)
T ss_dssp TSCSSCCCCCCEEEECSEEEEESCEEECCHH-HH-H-HHH-------TGG-GTGGGTCCEEEECGGGTSCCCHHHHHHHH
T ss_pred cccccccCCcceeeeCCEEEECCCCCCChHH-HH-H-Hhh-------hcc-cccccCCCCeEEEeCccchhhHHHHHHHH
Confidence 899999999999999853 33 2 211 123 344577899999999987544 799999
Q ss_pred HHHHHHhhhccccC
Q 035902 366 KNIANDINLALTDH 379 (381)
Q Consensus 366 ~~~a~~i~~~l~~~ 379 (381)
+.+|++|.+.+...
T Consensus 689 ~~aA~~i~~~l~~~ 702 (729)
T 1o94_A 689 HRVAREIEEANPQI 702 (729)
T ss_dssp HHHHHTTTSSCTTS
T ss_pred HHHHHHhhhhcccC
Confidence 99999999877543
No 90
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.96 E-value=3.2e-29 Score=232.88 Aligned_cols=288 Identities=15% Similarity=0.099 Sum_probs=184.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC--CCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLS--VPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g--~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
++|+|||||+||+++|.+|++.+ .+|+|||+++......... ... ....+.+++..
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~--------------~v~--------~g~~~~~~~~~ 60 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSN--------------EVI--------GGDRELASLRV 60 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHH--------------HHH--------HTSSCGGGGEE
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHH--------------HHh--------cCCCCHHHHhh
Confidence 78999999999999999999876 4899999986321100000 000 00001111111
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcc-eeecCC
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGE-YMHSSK 160 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~-~~~~~~ 160 (381)
.++. +...+++++. .+|++++.+. +. +.+.++ .++.||+||+|||+.+..+.++|.++..+. ..+...
T Consensus 61 ~~~~-~~~~gv~~i~-~~v~~id~~~--~~--v~~~~g-----~~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~ 129 (401)
T 3vrd_B 61 GYDG-LRAHGIQVVH-DSALGIDPDK--KL--VKTAGG-----AEFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWK 129 (401)
T ss_dssp CSHH-HHHTTCEEEC-SCEEEEETTT--TE--EEETTS-----CEEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSS
T ss_pred CHHH-HHHCCCEEEE-eEEEEEEccC--cE--EEeccc-----ceeecceeeeccCCccccCCccCchhhcccCccceec
Confidence 1122 2335777654 5688888765 44 777776 689999999999999998889987753221 112211
Q ss_pred CCCC--------CCCCCCeEEEEcCCCC-----------HHHHHHHHhhCC--CeeEEEEecCcceechhhHHHHHHHHh
Q 035902 161 YENG--------GKFIGKNVLVVGCGNS-----------GMEIAYDLSSCG--ACTSIVVRGPVHVLTREIVFAGMLLLK 219 (381)
Q Consensus 161 ~~~~--------~~~~~~~v~viG~G~~-----------~~e~a~~l~~~g--~~v~~i~r~~~~~~p~~~~~~~~~~~~ 219 (381)
..+. ........+|+++|.. +++++..+.+.+ .+|+++.+.+ .+.+.. .+...+.+
T Consensus 130 ~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~~~~~v~i~~~~~-~~~~~~--~~~~~~~~ 206 (401)
T 3vrd_B 130 AGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHKSKSKVIILDNSQ-TFSKQA--QFTKGWER 206 (401)
T ss_dssp CSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHCTTCEEEEECSSS-SCTTHH--HHHHHHHH
T ss_pred cHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcCCCCEEEEEcccc-cccccc--cccHHHHH
Confidence 1110 0122344455544332 345566666555 5799988777 331111 11111111
Q ss_pred hCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eE
Q 035902 220 FLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EV 293 (381)
Q Consensus 220 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v 293 (381)
. +...+++.+++++.+ +..++.+ .+
T Consensus 207 ~-------------------------------------------------~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v 237 (401)
T 3vrd_B 207 L-------------------------------------------------YGFGTENALIEWHPGPDAAVVKTDTEAMTV 237 (401)
T ss_dssp H-------------------------------------------------SCTTSTTCSEEEECTTTTCEEEEETTTTEE
T ss_pred H-------------------------------------------------HHHHHHhcCcEEEeCceEEEEEecccceEE
Confidence 1 133456778888877 6665432 58
Q ss_pred EEcCCcEeeccEEEEecCCCCCcchhccccCCcccccCCCCCCCCCCC-CCCCCcEEEEecccccc---c---CccHHHH
Q 035902 294 EFENGKIEEFEAIIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNH-WKGENGLYCAGFSRTGL---H---GISIDAK 366 (381)
Q Consensus 294 ~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~ifa~Gd~~~~~---~---~a~~~a~ 366 (381)
.+++|+++++|.+++++|.+|+. ++. . .++.++.|++.||...+ .++.|||||+|||++.. . .|..||+
T Consensus 238 ~~~~g~~i~~D~vi~~~g~~~~~--~~~-~-~gl~~~~G~i~VD~~tl~~t~~p~VfAiGDva~~~~~pk~a~~A~~qa~ 313 (401)
T 3vrd_B 238 ETSFGETFKAAVINLIPPQRAGK--IAQ-S-ASLTNDSGWCPVDIRTFESSLQPGIHVIGDACNAAPMPKSAYSANSQAK 313 (401)
T ss_dssp EETTSCEEECSEEEECCCEEECH--HHH-H-TTCCCTTSSBCBCTTTCBBSSSTTEEECGGGBCCTTSCBSHHHHHHHHH
T ss_pred EcCCCcEEEeeEEEEecCcCCch--hHh-h-ccccccCCCEEECCCcceecCCCCEEEecccccCCCCCchHHHHHHHHH
Confidence 88999999999999999999874 444 3 67789999999994433 47899999999997542 1 7889999
Q ss_pred HHHHHhhhccccCC
Q 035902 367 NIANDINLALTDHQ 380 (381)
Q Consensus 367 ~~a~~i~~~l~~~~ 380 (381)
.+|+||...|+..+
T Consensus 314 v~A~ni~~~l~G~~ 327 (401)
T 3vrd_B 314 VAAAAVVALLKGEE 327 (401)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCCC
Confidence 99999999887543
No 91
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.95 E-value=5.5e-30 Score=239.57 Aligned_cols=288 Identities=16% Similarity=0.134 Sum_probs=176.3
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCC--CCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHH
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLS--VPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRIS 78 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g--~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (381)
|+ ++|+|||||+||+++|..|++.+ .+|+|||+++...-. .+. .... ....+.++
T Consensus 1 M~-K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~-------p~l-------~~v~--------~g~~~~~~ 57 (430)
T 3hyw_A 1 MA-KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT-------PAF-------PHLA--------MGWRKFED 57 (430)
T ss_dssp -C-CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG-------GGH-------HHHH--------HTCSCGGG
T ss_pred CC-CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccC-------ccH-------HHHh--------cCCCCHHH
Confidence 75 68999999999999999999875 689999998732100 000 0000 00001111
Q ss_pred HHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeec
Q 035902 79 FINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHS 158 (381)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~ 158 (381)
+...+++++++.+++++. .+|++|+.+. +. |+++++ +++.||+||+|||+.+. +++||.++. ....
T Consensus 58 i~~~~~~~~~~~gv~~i~-~~v~~Id~~~--~~--V~~~~g-----~~i~YD~LViAtG~~~~-~~i~G~~e~---~~~~ 123 (430)
T 3hyw_A 58 ISVPLAPLLPKFNIEFIN-EKAESIDPDA--NT--VTTQSG-----KKIEYDYLVIATGPKLV-FGAEGQEEN---STSI 123 (430)
T ss_dssp SEEESTTTGGGGTEEEEC-SCEEEEETTT--TE--EEETTC-----CEEECSEEEECCCCEEE-CCSBTHHHH---SCCC
T ss_pred hhhcHHHHHHHCCcEEEE-eEEEEEECCC--CE--EEECCC-----CEEECCEEEEeCCCCcc-CCccCcccC---cCCc
Confidence 111122344556777654 4799998765 54 888877 68999999999999854 356775431 1111
Q ss_pred CCCCCCC-------C-CCCCeEEEEcCCC------CHHHHHH----HHhhCC----CeeEEEEecCcceechhhHHHHHH
Q 035902 159 SKYENGG-------K-FIGKNVLVVGCGN------SGMEIAY----DLSSCG----ACTSIVVRGPVHVLTREIVFAGML 216 (381)
Q Consensus 159 ~~~~~~~-------~-~~~~~v~viG~G~------~~~e~a~----~l~~~g----~~v~~i~r~~~~~~p~~~~~~~~~ 216 (381)
+...+.. + ...+.++|+|++. .+.|++. .+.+.+ .+|+++...+ .+.+. ...
T Consensus 124 ~~~~~a~~~~~~l~~~~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~l~~~g~~~~v~v~~~~~~~-~l~~~-~~~---- 197 (430)
T 3hyw_A 124 CTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP-YLGHF-GVG---- 197 (430)
T ss_dssp SSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS-STTCT-TTT----
T ss_pred ccHHHHHHHHHHHHhhccCCceEEEeCCCcEEEhHHHHHHHHHHHHHHHHhcccccceeeeecccc-hhhhc-cch----
Confidence 1111100 0 1234455665543 1234333 333444 3567776554 11110 000
Q ss_pred HHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCeEE
Q 035902 217 LLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNEVE 294 (381)
Q Consensus 217 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~v~ 294 (381)
..+.....+.+.+++.+|+++.+ |++++++++.
T Consensus 198 ---------------------------------------------~~~~~~~~l~~~l~~~GV~~~~~~~v~~v~~~~~~ 232 (430)
T 3hyw_A 198 ---------------------------------------------GIGASKRLVEDLFAERNIDWIANVAVKAIEPDKVI 232 (430)
T ss_dssp ---------------------------------------------CSTTHHHHHHHHHHHTTCEEECSCEEEEECSSEEE
T ss_pred ---------------------------------------------hhHHHHHHHHHHHHhCCeEEEeCceEEEEeCCceE
Confidence 00111112345667789999998 9999999887
Q ss_pred EcC----CcEeeccEEEEecCCCCCcchhccccCCccc-ccCCCCCCCCCCCC-CCCCcEEEEecccccc----------
Q 035902 295 FEN----GKIEEFEAIIFATGYKSTVRNWLKRADKDFF-DEYGMPKRNCPNHW-KGENGLYCAGFSRTGL---------- 358 (381)
Q Consensus 295 ~~~----g~~~~~D~vi~a~G~~p~~~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~ifa~Gd~~~~~---------- 358 (381)
+++ ++++++|.+++++|.+|+. .+.. ....+. +..|++.+| +.++ ++.|||||+|||+..+
T Consensus 233 ~~~~~g~~~~i~~d~vi~~~G~~~~~-~~~~-~~~~l~~~~~g~i~vd-~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~ 309 (430)
T 3hyw_A 233 YEDLNGNTHEVPAKFTMFMPSFQGPE-VVAS-AGDKVANPANKMVIVN-RCFQNPTYKNIFGVGVVTAIPPIEKTPIPTG 309 (430)
T ss_dssp EECTTSCEEEEECSEEEEECEEECCH-HHHT-TCTTTBCTTTCCBCCC-TTSBCSSSTTEEECSTTBCCCCSSCCSSCCC
T ss_pred EEeeCCCceEeecceEEEeccCCCch-HHHh-cccccccCCceEEEec-ccccCCCCCCEEEeccEEecCCcccCcCcCc
Confidence 764 3589999999999999984 2222 213343 446678888 4554 8899999999998642
Q ss_pred --c---CccHHHHHHHHHhhhccccC
Q 035902 359 --H---GISIDAKNIANDINLALTDH 379 (381)
Q Consensus 359 --~---~a~~~a~~~a~~i~~~l~~~ 379 (381)
. .|..||+.+|+||...++..
T Consensus 310 ~pk~a~~A~~qg~~~A~Ni~~~l~g~ 335 (430)
T 3hyw_A 310 VPKTGMMIEQMAMAVAHNIVNDIRNN 335 (430)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 1 68899999999999988764
No 92
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.95 E-value=4e-28 Score=238.97 Aligned_cols=287 Identities=15% Similarity=0.189 Sum_probs=180.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.+||+|||||+||+++|..|++.|.+|+|||+++.+||.|.... . .+......++.++
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~----------------~------~~~~~~~~~~~~~ 430 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK----------------Q------IPGKEEFYETLRY 430 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT----------------T------STTCTTHHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc----------------c------CCCHHHHHHHHHH
Confidence 37999999999999999999999999999999988887653210 0 0111223456667
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEE-EeCEEEEccCCCCCCCCCCCCCCCCcceeecCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEY-VARYLVVATGENGLIPEVPGLGSFEGEYMHSSKY 161 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~-~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~ 161 (381)
+.+.++++++++++++.+.. ..+ .||+||+|||+.|..|.++|.+. ..+++..++
T Consensus 431 ~~~~~~~~gv~~~~~~~v~~----------------------~~~~~~d~lviAtG~~p~~~~i~G~~~--~~v~~~~~~ 486 (671)
T 1ps9_A 431 YRRMIEVTGVTLKLNHTVTA----------------------DQLQAFDETILASGIVPRTPPIDGIDH--PKVLSYLDV 486 (671)
T ss_dssp HHHHHHHHTCEEEESCCCCS----------------------SSSCCSSEEEECCCEEECCCCCBTTTS--TTEEEHHHH
T ss_pred HHHHHHHcCCEEEeCcEecH----------------------HHhhcCCEEEEccCCCcCCCCCCCCCC--CcEeeHHHH
Confidence 77777888988877764420 113 79999999999999999998764 235666555
Q ss_pred CCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC--cceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhc
Q 035902 162 ENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP--VHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFG 239 (381)
Q Consensus 162 ~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~--~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 239 (381)
.......+++++|||+|.+|+|+|..|++.|.+|++....- .+-......... .+....+.. ..
T Consensus 487 l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~-~~~~~~~~~-------------~~ 552 (671)
T 1ps9_A 487 LRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAG-GLSPQGMQI-------------PR 552 (671)
T ss_dssp HTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGG-GBCTTCCCC-------------CC
T ss_pred hhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccc-ccccccccc-------------CC
Confidence 44444568999999999999999999999987665321000 000000000000 000000000 00
Q ss_pred CccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCCeEEE-cCC--cEeeccEEEEecCCCC
Q 035902 240 NLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRNEVEF-ENG--KIEEFEAIIFATGYKS 314 (381)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~~v~~-~~g--~~~~~D~vi~a~G~~p 314 (381)
......+. ....... .....+.......+.+++.+|+++.+ +++++++++.+ .+| +++++|.||+|+|++|
T Consensus 553 ~~~~v~l~-~~~~~~l---~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 553 SPRQIVML-QRKASKP---GQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp CSSEEEEE-CSSCSCT---TTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCEEE
T ss_pred CCcEEEEE-Eecchhh---ccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCccc
Confidence 00000000 0000000 00000111122356677889999988 88998888777 577 5799999999999999
Q ss_pred CcchhccccCCcccccCCCCCCCCCCCCCCCCcEEEEecccccc----cCccHHHHHHHHHh
Q 035902 315 TVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGLYCAGFSRTGL----HGISIDAKNIANDI 372 (381)
Q Consensus 315 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~----~~a~~~a~~~a~~i 372 (381)
++.. +. . +... .++||++|||.... ..|+.||..+|++|
T Consensus 629 ~~~l-~~-~----l~~~-------------g~~v~aiGD~~~~~~~~~~~A~~~g~~aA~~i 671 (671)
T 1ps9_A 629 NRAL-AQ-P----LIDS-------------GKTVHLIGGCDVAMELDARRAIAQGTRLALEI 671 (671)
T ss_dssp CCTT-HH-H----HHTT-------------TCCEEECGGGTCCSSCCHHHHHHHHHHHHHHC
T ss_pred cHHH-HH-H----HHhc-------------CCCEEEECCcCccCchhHHHHHHHHHHHHHhC
Confidence 9853 32 1 1111 25899999997653 27999999999886
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.93 E-value=1.3e-26 Score=220.07 Aligned_cols=253 Identities=17% Similarity=0.148 Sum_probs=174.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
++||+|||||++|+++|+.|++. .+|+|||+++.+|+.+....+ ..++ + +. ...++...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~---------~~~g---~------~~--~~~~~~~~ 166 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGI---------KQEG---F------NK--DSRKVVEE 166 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCS---------EETT---T------TE--EHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeecccc---------ccCC---C------CC--CHHHHHHH
Confidence 37999999999999999999999 999999999988886543211 0000 0 11 23444444
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSKYE 162 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~~~ 162 (381)
+.+.+ +.++++++++++.+++.+. +.+.+...+. ++...+.||+||+|||+.|..|.++|.+. ++ +++..++.
T Consensus 167 l~~~l-~~~v~~~~~~~v~~i~~~~--~~~~~~~~~~--~~~~~~~~d~lvlAtGa~~~~~~~~g~~~-~g-v~~~~~~~ 239 (493)
T 1y56_A 167 LVGKL-NENTKIYLETSALGVFDKG--EYFLVPVVRG--DKLIEILAKRVVLATGAIDSTMLFENNDM-PG-VFRRDFAL 239 (493)
T ss_dssp HHHTC-CTTEEEETTEEECCCEECS--SSEEEEEEET--TEEEEEEESCEEECCCEEECCCCCTTTTS-TT-EEEHHHHH
T ss_pred HHHHH-hcCCEEEcCCEEEEEEcCC--cEEEEEEecC--CeEEEEECCEEEECCCCCccCCCCCCCCC-CC-EEEcHHHH
Confidence 43333 4577888899998888765 4454444221 12247999999999999999888888763 33 33332211
Q ss_pred ---CC-CCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhh
Q 035902 163 ---NG-GKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKF 238 (381)
Q Consensus 163 ---~~-~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 238 (381)
.. ....+++++|+|+|.+|+| ..+.+.|.+
T Consensus 240 ~~~~~~~~~~~~~vvViGgG~~gle--~~l~~~GV~-------------------------------------------- 273 (493)
T 1y56_A 240 EVMNVWEVAPGRKVAVTGSKADEVI--QELERWGID-------------------------------------------- 273 (493)
T ss_dssp HHHHTSCBCSCSEEEEESTTHHHHH--HHHHHHTCE--------------------------------------------
T ss_pred HHHHhcccCCCCEEEEECCCHHHHH--HHHHhCCcE--------------------------------------------
Confidence 11 1235789999999999998 333333332
Q ss_pred cCccccCCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC----eEEEcCCcEeeccEEEEecCC
Q 035902 239 GNLFKYGLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN----EVEFENGKIEEFEAIIFATGY 312 (381)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~----~v~~~~g~~~~~D~vi~a~G~ 312 (381)
++.+ +.++..+ .+.+.+|+++++|.||+|+|+
T Consensus 274 ------------------------------------------v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~ 311 (493)
T 1y56_A 274 ------------------------------------------YVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGR 311 (493)
T ss_dssp ------------------------------------------EEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCE
T ss_pred ------------------------------------------EEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCc
Confidence 2222 3333322 356778889999999999999
Q ss_pred CCCcchhccccCCcc---cccCCCCC-CCCCCCCCCCCcEEEEeccccccc--CccHHHHHHHHHhhhcc
Q 035902 313 KSTVRNWLKRADKDF---FDEYGMPK-RNCPNHWKGENGLYCAGFSRTGLH--GISIDAKNIANDINLAL 376 (381)
Q Consensus 313 ~p~~~~~~~~~~~~~---~~~~g~~~-~~~~~~~~~~~~ifa~Gd~~~~~~--~a~~~a~~~a~~i~~~l 376 (381)
+|+.+.+-. .++ +++.|++. +| +.++ +.|+||++|||.+... .|..||+.+|.+|.+.+
T Consensus 312 ~p~~~l~~~---~g~~~~~~~~g~i~~vd-~~~~-s~~~vya~GD~~~~~~~~~A~~~g~~aa~~i~~~l 376 (493)
T 1y56_A 312 RPDINPITQ---AGGKLRFRRGYYSPVLD-EYHR-IKDGIYVAGSAVSIKPHYANYLEGKLVGAYILKEF 376 (493)
T ss_dssp EECCHHHHH---TTCCEEEETTEEEECCC-TTSE-EETTEEECSTTTCCCCHHHHHHHHHHHHHHHHHHT
T ss_pred CcCchHHHh---cCCCccccCCceeeccc-cccC-cCCCEEEEeccCCccCHHHHHHHHHHHHHHHHHHc
Confidence 999864333 443 35688876 66 3444 8899999999987654 88899999999998865
No 94
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.73 E-value=4.2e-21 Score=172.94 Aligned_cols=150 Identities=13% Similarity=0.052 Sum_probs=101.1
Q ss_pred cccEEEECCCHHHHHHHHHHHh--CCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNN--LSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~--~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
++||+||||||||++||++|++ .|++|+|||+.+.+||......+ .+++..+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~-------------------------~~~~~~l~ 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQ-------------------------LFSAMVMR 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCST-------------------------TCCCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCc-------------------------cCCHHHHH
Confidence 4899999999999999999975 49999999999888874322100 00000011
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCCCCCcceeecCC
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLGSFEGEYMHSSK 160 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~~~~~~~~~~~~ 160 (381)
......++++++++..+. . .....+.++++++..+..+.++|...+.+.....+.
T Consensus 120 ~~~~~~~~e~Gv~~~~~~-----------~--------------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (326)
T 3fpz_A 120 KPAHLFLQELEIPYEDEG-----------D--------------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLV 174 (326)
T ss_dssp TTTHHHHHHTTCCCEECS-----------S--------------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEE
T ss_pred HHHHHHHHHcCCEEEECC-----------c--------------ceecceeEEEEcchhhhccccccceeecccccceee
Confidence 112233455676543211 1 234445566677777666677776655554444444
Q ss_pred CCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 161 YENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 161 ~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+.....++++.++|+|.++++.|..+...+.++++..+..
T Consensus 175 ~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 175 TRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp EESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred ccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 445555678999999999999999999999999998887665
No 95
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.71 E-value=2e-17 Score=135.67 Aligned_cols=160 Identities=19% Similarity=0.181 Sum_probs=112.1
Q ss_pred eEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCC
Q 035902 171 NVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPK 250 (381)
Q Consensus 171 ~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (381)
+++|||+|++|+++|..|++.|.+|+++.+.+ ..+++.. .+ .. . +.
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~-~~~~~~~---------~~--------------------~~--~--~~ 48 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR-SKVKGVS---------RV--------------------PN--Y--PG 48 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CTTTTCS---------CC--------------------CC--S--TT
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-CcccCch---------hh--------------------hc--c--CC
Confidence 68999999999999999999999999999987 3322100 00 00 0 00
Q ss_pred CCCcccccccCCCccccchhhhhhcCCCeEEccC-cceEeCC----eEEEcCCcEeeccEEEEecCCCCCcchhccccCC
Q 035902 251 KGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS-ITSINRN----EVEFENGKIEEFEAIIFATGYKSTVRNWLKRADK 325 (381)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~~~~ 325 (381)
.+ .....+.+...+.+.+++.+++++.+ +++++.+ .+.+++| ++++|.||+|+|.+|+.. . . .
T Consensus 49 ~~------~~~~~~~~~~~l~~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~---~-~-~ 116 (180)
T 2ywl_A 49 LL------DEPSGEELLRRLEAHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLP---S-L-L 116 (180)
T ss_dssp CT------TCCCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHH---H-H-H
T ss_pred Cc------CCCCHHHHHHHHHHHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCcc---c-c-C
Confidence 00 00000122223355566677888877 7777642 3566677 899999999999998642 2 1 3
Q ss_pred cc-cccCCCCCCCCCCCCCCCCcEEEEeccccccc----CccHHHHHHHHHhhhcccc
Q 035902 326 DF-FDEYGMPKRNCPNHWKGENGLYCAGFSRTGLH----GISIDAKNIANDINLALTD 378 (381)
Q Consensus 326 ~~-~~~~g~~~~~~~~~~~~~~~ifa~Gd~~~~~~----~a~~~a~~~a~~i~~~l~~ 378 (381)
++ ++ +|++.+| +..+++.|+||++|||..... .|..||+.+|++|.+.++.
T Consensus 117 g~~~~-~g~i~vd-~~~~t~~~~i~a~GD~~~~~~~~~~~A~~~g~~aa~~i~~~~~~ 172 (180)
T 2ywl_A 117 GLTRR-GAYIDTD-EGGRTSYPRVYAAGVARGKVPGHAIISAGDGAYVAVHLVSDLRG 172 (180)
T ss_dssp TCCEE-TTEECCC-TTCBCSSTTEEECGGGGTCCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCcc-CceEEeC-CCCCcCCCCEEEeecccCcchhhHHHHHHhHHHHHHHHHHHhhh
Confidence 33 56 8888888 567788999999999987653 7899999999999988754
No 96
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.70 E-value=6.7e-17 Score=138.02 Aligned_cols=131 Identities=14% Similarity=0.017 Sum_probs=86.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCccc-ccCCCCCCCCCCCCCCHHHH
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFC-ELPHMPFPSRTPTFVPRISF 79 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 79 (381)
|+++||+|||||++|+.+|..|++.|.+|+|||+.....|.|........ ....+. .+.. ...+.+.++
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~---~~~~~~~~~~d-------~~g~~~~~~ 70 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPF---PPGSLLERAYD-------PKDERVWAF 70 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCC---CTTCHHHHHCC-------TTCCCHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCcccccc---chhhHHhhhcc-------CCCCCHHHH
Confidence 77899999999999999999999999999999998432222221111000 000000 0000 001156688
Q ss_pred HHHHHHHHHHh-CCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCC
Q 035902 80 INYVDNYVSQM-GINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGL 148 (381)
Q Consensus 80 ~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~ 148 (381)
.+++.+.+++. +++++ +++|+++..++ +..+.|.+.++ ..+++|+||+|+|.++.....+|.
T Consensus 71 ~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~~~~g-----~~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVRTWEG-----PPARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp HHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEEETTS-----CCEECSEEEECCTTCSSCEEEETT
T ss_pred HHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEEECCC-----CEEECCEEEECCCCChhhceecCC
Confidence 88888888886 88876 67899998765 23345666555 479999999999998654433443
No 97
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.61 E-value=3.3e-16 Score=147.59 Aligned_cols=304 Identities=16% Similarity=0.092 Sum_probs=156.8
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC--cCCCC----CC---Cee--ee--------------------
Q 035902 5 PVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL--WKKRA----YD---RMK--LH-------------------- 53 (381)
Q Consensus 5 ~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~--~~~~~----~~---~~~--~~-------------------- 53 (381)
||+|||||++|+++|+.|++.|.+|+|+|+. ..++. |.... .. ... ..
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999998 44432 21110 00 000 00
Q ss_pred -cCC--cccccCCCCCCC--------CCC-----CCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeE-EEEE
Q 035902 54 -LAK--QFCELPHMPFPS--------RTP-----TFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAW-IIVA 116 (381)
Q Consensus 54 -~~~--~~~~~~~~~~~~--------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~-~v~~ 116 (381)
.+. .++.....++.. ..+ ......++.+.+.+.+++.+++++.++.| ++..++ +.. .+..
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v 156 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVT 156 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEE
Confidence 000 000000111110 001 01234567777777777789999999999 987764 332 2333
Q ss_pred eecCCCceEEEEeCEEEEccCCCCCCCCCC-CCCCCCcceeecC-----CCCCCCCCCC-CeEEEEcCCCCHHHHHHHHh
Q 035902 117 KNTALDAYEEYVARYLVVATGENGLIPEVP-GLGSFEGEYMHSS-----KYENGGKFIG-KNVLVVGCGNSGMEIAYDLS 189 (381)
Q Consensus 117 ~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~-g~~~~~~~~~~~~-----~~~~~~~~~~-~~v~viG~G~~~~e~a~~l~ 189 (381)
.+. ...+.+|.||+|||..+..+... +.....+.-+... ...+...... ...+++|+| +++++..+.
T Consensus 157 ~~~----~g~~~a~~VVlAtGg~~~~~~~~~~~~~~tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~ggg--~~~~ae~~~ 230 (472)
T 2e5v_A 157 EKR----GLVEDVDKLVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGE--VFLLTETLR 230 (472)
T ss_dssp TTT----EEECCCSEEEECCCCCGGGSSSBSSCTTCSCHHHHHHHHTTCCEECTTCEEEEEEEECGGGC--CEECCTHHH
T ss_pred EeC----CCeEEeeeEEECCCCCcccCccccCCCCCchHHHHHHHHcCCCEeCCcceEEEeEEEccCCC--ceeeehhhc
Confidence 211 13477999999999996655432 1111122111000 0111111111 233455666 777777777
Q ss_pred hCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCCCCCCCcccccccCCCccccch
Q 035902 190 SCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLERPKKGPFYFKAITGQTPTIDVG 269 (381)
Q Consensus 190 ~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (381)
..|..+ +..+.+ ++++..+... +..|.......
T Consensus 231 ~~G~~~-v~~~g~-rf~~~~~~~~-----el~~rd~v~~~---------------------------------------- 263 (472)
T 2e5v_A 231 GEGAQI-INENGE-RFLFNYDKRG-----ELAPRDILSRA---------------------------------------- 263 (472)
T ss_dssp HTTCEE-EETTCC-CGGGGTCTTG-----GGSCHHHHHHH----------------------------------------
T ss_pred CCceEE-ECCCCC-CCCccCCccc-----CcCchhHHHHH----------------------------------------
Confidence 778776 555555 6666544321 11221111111
Q ss_pred hhhhhcCCCeEEccCcceEeCCeEEEcCCcEee-ccEEEEecCCCCCcchhccccCCcccccCCCCCCCCCCCCCCCCcE
Q 035902 270 AMDKIRKGEIQVFPSITSINRNEVEFENGKIEE-FEAIIFATGYKSTVRNWLKRADKDFFDEYGMPKRNCPNHWKGENGL 348 (381)
Q Consensus 270 ~~~~~~~~~v~~~~~v~~v~~~~v~~~~g~~~~-~D~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i 348 (381)
+.+.+++++. ++.+.+.+.. +. +.++ .|.++.+.|.+|+ . ++... .......|.+.+| +..+++.|||
T Consensus 264 i~~~~~~~~~-v~ld~~~~~~----~~--~~~~~~~~~~~~~G~dp~-~-~i~v~-p~~~~~~GGI~vd-~~~~t~ipgL 332 (472)
T 2e5v_A 264 IYIEMLKGHK-VFIDLSKIED----FE--RKFPVVAKYLARHGHNYK-V-KIPIF-PAAHFVDGGIRVN-IRGESNIVNL 332 (472)
T ss_dssp HHHHHHHTCC-EEEECTTCTT----HH--HHCHHHHHHHHHTTCCTT-S-CEECE-EEEEEESCEEECC-TTCBCSSBTE
T ss_pred HHHHHHhCCc-EEEeccchHH----HH--HHhHHHHHHHHHhCcCcc-c-ceEee-hhhceeCCCeEEC-CCCccccCCE
Confidence 0111111110 1111000000 00 1122 4667778899998 3 33301 1123346778888 5678899999
Q ss_pred EEEecccc-ccc-------CccHHHHHHHHHhhhcc
Q 035902 349 YCAGFSRT-GLH-------GISIDAKNIANDINLAL 376 (381)
Q Consensus 349 fa~Gd~~~-~~~-------~a~~~a~~~a~~i~~~l 376 (381)
||+|||++ +.. .+..++...++.+...+
T Consensus 333 yAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~ 368 (472)
T 2e5v_A 333 YAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYV 368 (472)
T ss_dssp EECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTT
T ss_pred EecchhcccccCCCCCCCcccHHHHHHHHHHHHHHH
Confidence 99999987 431 45566555555554443
No 98
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.57 E-value=9.5e-16 Score=141.35 Aligned_cols=186 Identities=15% Similarity=0.189 Sum_probs=113.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC---------CCCC---CeeeecCCcc----------
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK---------RAYD---RMKLHLAKQF---------- 58 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~---------~~~~---~~~~~~~~~~---------- 58 (381)
|+++||+|||||++|+++|+.|+++|.+|+|+|+++.+++.|.. +... ......+...
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 35699999999999999999999999999999999877543321 0000 0000000000
Q ss_pred -----cccCCCCCCC-CCC-CCC--CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCC--CCeEEEEEeecCCCceEEE
Q 035902 59 -----CELPHMPFPS-RTP-TFV--PRISFINYVDNYVSQMGINPRYHRSVESASYDEN--AKAWIIVAKNTALDAYEEY 127 (381)
Q Consensus 59 -----~~~~~~~~~~-~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~~v~~~~~~~~~~~~~ 127 (381)
......++.. ... .++ ...++.+.+.+.+++.+++++++++|+++..+++ .+.|.|.+.+ ..+
T Consensus 82 ~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~------g~i 155 (401)
T 2gqf_A 82 DFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNS------TQW 155 (401)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETT------EEE
T ss_pred HHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECC------CEE
Confidence 0000000000 000 011 5678888888888889999999999999987510 1446676543 369
Q ss_pred EeCEEEEccCCCCC--------------------CCCCCCCCCCCcceeecCC-C---CCCCCCCCCeEEEEc-------
Q 035902 128 VARYLVVATGENGL--------------------IPEVPGLGSFEGEYMHSSK-Y---ENGGKFIGKNVLVVG------- 176 (381)
Q Consensus 128 ~~d~vIlAtG~~~~--------------------~~~~~g~~~~~~~~~~~~~-~---~~~~~~~~~~v~viG------- 176 (381)
++|+||+|||..+. .|..|++..+ .++..+ + ...... +.++.|+|
T Consensus 156 ~ad~VVlAtG~~s~p~~g~~G~g~~la~~~G~~i~~~~p~l~~~---~~~~~~~~~~~l~g~~~-~~~~~i~G~~~~~g~ 231 (401)
T 2gqf_A 156 QCKNLIVATGGLSMPGLGATPFGYQIAEQFGIPVIPPRASLVPF---TYRETDKFLTALSGISL-PVTITALCGKSFYNQ 231 (401)
T ss_dssp EESEEEECCCCSSCGGGTCCSHHHHHHHHTTCCEEEEEEESCCE---ECCGGGGGGGGGTTCEE-EEEEEETTSCEEEEE
T ss_pred ECCEEEECCCCccCCCCCCChHHHHHHHHCCCCcccCcceeece---ecCCchhhcccCCCeee-eeEEEEcCCceEEeC
Confidence 99999999999963 1223333221 111211 1 112221 34555568
Q ss_pred --------CCCCHHHHHHHHhhCCCeeEE
Q 035902 177 --------CGNSGMEIAYDLSSCGACTSI 197 (381)
Q Consensus 177 --------~G~~~~e~a~~l~~~g~~v~~ 197 (381)
+|+.+++++..+.. +.+|++
T Consensus 232 ~l~t~~g~sG~~~l~~s~~~~~-~~~~~i 259 (401)
T 2gqf_A 232 LLFTHRGISGPAVLQISNYWQP-TESVEI 259 (401)
T ss_dssp EEECSSEEESHHHHHHTTTCCT-TCCEEE
T ss_pred EEEECCCccHHHHHHHHHHHhc-CCEEEE
Confidence 89999999998876 666654
No 99
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.45 E-value=3e-13 Score=110.53 Aligned_cols=118 Identities=16% Similarity=0.235 Sum_probs=86.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
+||+|||||++|+.+|..|++.|.+|+|+|+.+..-. .. .....++. ++......++.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~---~~----------~~~~~~~~------~~~~~~~~~~~~~l 62 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVK---GV----------SRVPNYPG------LLDEPSGEELLRRL 62 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTT---TC----------SCCCCSTT------CTTCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCccc---Cc----------hhhhccCC------CcCCCCHHHHHHHH
Confidence 7999999999999999999999999999999862211 00 00001111 11224567899999
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPGLG 149 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g~~ 149 (381)
.+.+++.+++++++ +|.+++.++ +.+.+++.++ ++.+|.||+|+|..|..+...|++
T Consensus 63 ~~~~~~~gv~v~~~-~v~~i~~~~--~~~~v~~~~g------~i~ad~vI~A~G~~~~~~~~~g~~ 119 (180)
T 2ywl_A 63 EAHARRYGAEVRPG-VVKGVRDMG--GVFEVETEEG------VEKAERLLLCTHKDPTLPSLLGLT 119 (180)
T ss_dssp HHHHHHTTCEEEEC-CCCEEEECS--SSEEEECSSC------EEEEEEEEECCTTCCHHHHHHTCC
T ss_pred HHHHHHcCCEEEeC-EEEEEEEcC--CEEEEEECCC------EEEECEEEECCCCCCCccccCCCC
Confidence 99999999999999 999998765 4466766542 689999999999998554333443
No 100
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.43 E-value=2.1e-13 Score=130.61 Aligned_cols=171 Identities=12% Similarity=0.147 Sum_probs=104.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC-CCCCCcCCCCCCCe-----e--eecCCcc---------cccCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED-CSASLWKKRAYDRM-----K--LHLAKQF---------CELPHMP 65 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~-~~g~~~~~~~~~~~-----~--~~~~~~~---------~~~~~~~ 65 (381)
++||+|||||+||++||+.|++.|.+|+|||++. .+|........... . ....... ..+....
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 5899999999999999999999999999999874 23321110000000 0 0000000 0000000
Q ss_pred CCCC---C--CCCCCHHHHHHHHHHHHHH-hCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 66 FPSR---T--PTFVPRISFINYVDNYVSQ-MGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 66 ~~~~---~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
.... . .....+..+...+.+.+++ .++++ ++++|.++..++ +..+.|.+.++ ..+.||.||+|||.+
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~-g~V~GV~t~dG-----~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEN-DRVVGAVTQMG-----LKFRAKAVVLTVGTF 180 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESS-SBEEEEEETTS-----EEEEEEEEEECCSTT
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecC-CEEEEEEECCC-----CEEECCEEEEcCCCC
Confidence 0000 0 0123456777888888877 58887 678899987754 23445666655 689999999999999
Q ss_pred CCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEe
Q 035902 140 GLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVR 200 (381)
Q Consensus 140 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r 200 (381)
+..+.++|...+ .+.+ +| |.++++++..|.+.|.+|+.+..
T Consensus 181 s~~~~i~G~~~~----------------~~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 181 LDGKIHIGLDNY----------------SGGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp TCCEEECC---------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred ccCccccCcccC----------------CCCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 887777775532 1223 56 78899999999999999988853
No 101
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.43 E-value=7.2e-13 Score=122.18 Aligned_cols=138 Identities=12% Similarity=0.130 Sum_probs=88.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC------CC----------------CCCeeeecCCcc
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK------RA----------------YDRMKLHLAKQF 58 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~------~~----------------~~~~~~~~~~~~ 58 (381)
|++|||+||||||+|+++|+.|+++|++|+|||+.+.++..... .. ...+....+...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCc
Confidence 88899999999999999999999999999999998765431110 00 000111111000
Q ss_pred c--ccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEE-EEEeecCCCceEEEEeCEEEEc
Q 035902 59 C--ELPHMPFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWI-IVAKNTALDAYEEYVARYLVVA 135 (381)
Q Consensus 59 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vIlA 135 (381)
. ................+..+...+.+.+.+.|++++++++++++..++ +... +.... .++..++++|+||.|
T Consensus 82 ~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~--~~~~~~~~a~~vIgA 157 (397)
T 3oz2_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRH--NNEIVDVRAKMVIAA 157 (397)
T ss_dssp SCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEE--TTEEEEEEEEEEEEC
T ss_pred eEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecc--cccceEEEEeEEEeC
Confidence 0 000000000001134678888999998988999999999999988775 3322 22222 123467999999999
Q ss_pred cCCCCCC
Q 035902 136 TGENGLI 142 (381)
Q Consensus 136 tG~~~~~ 142 (381)
+|..+.+
T Consensus 158 dG~~S~v 164 (397)
T 3oz2_A 158 DGFESEF 164 (397)
T ss_dssp CCTTCHH
T ss_pred CccccHH
Confidence 9998543
No 102
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.41 E-value=1e-12 Score=121.35 Aligned_cols=137 Identities=12% Similarity=0.135 Sum_probs=90.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC------------CCC----------CeeeecCCcc
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR------------AYD----------RMKLHLAKQF 58 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~------------~~~----------~~~~~~~~~~ 58 (381)
|+++||+|||||++|+++|+.|++.|.+|+|+|+....++..... ... .+........
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCC
Confidence 667999999999999999999999999999999988665422110 000 0000000000
Q ss_pred --cccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEE-EEEeecCCCceEEEEeCEEEEc
Q 035902 59 --CELPHMPFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWI-IVAKNTALDAYEEYVARYLVVA 135 (381)
Q Consensus 59 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vIlA 135 (381)
..+..............+..+.+.+.+.+.+.|++++++++|+++..++ +.+. |.+.+. ++...+++|.||.|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~--~~~~~~~a~~vV~A 157 (397)
T 3cgv_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHN--NEIVDVRAKMVIAA 157 (397)
T ss_dssp SCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEET--TEEEEEEEEEEEEC
T ss_pred EEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEEC--CeEEEEEcCEEEEC
Confidence 0000000000111234677888999888888899999999999998875 5555 666432 12368999999999
Q ss_pred cCCCCC
Q 035902 136 TGENGL 141 (381)
Q Consensus 136 tG~~~~ 141 (381)
+|.+..
T Consensus 158 ~G~~s~ 163 (397)
T 3cgv_A 158 DGFESE 163 (397)
T ss_dssp CCTTCH
T ss_pred CCcchH
Confidence 999853
No 103
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.40 E-value=1.5e-12 Score=120.43 Aligned_cols=129 Identities=15% Similarity=0.148 Sum_probs=87.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC------------CCCCeeeecCCcc------------
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR------------AYDRMKLHLAKQF------------ 58 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~------------~~~~~~~~~~~~~------------ 58 (381)
++||+|||||++|+++|+.|+++|.+|+|+|+.+.+++.+... ....+....+...
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 106 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQDF 106 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHHH
Confidence 5899999999999999999999999999999998776533110 0000000000000
Q ss_pred ---cccCCCCCC-----CCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeC
Q 035902 59 ---CELPHMPFP-----SRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVAR 130 (381)
Q Consensus 59 ---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d 130 (381)
+.....++. ..++ .....++.+.+.+.+++.+++++++++|+++..++ +.|.|.+.++ .++||
T Consensus 107 ~~~~~~~Gi~~~~~~~g~~~~-~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~~~V~~~~g------~i~ad 177 (417)
T 3v76_A 107 VALVERHGIGWHEKTLGQLFC-DHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SGFRVTTSAG------TVDAA 177 (417)
T ss_dssp HHHHHHTTCCEEECSTTEEEE-SSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEEEEEETTE------EEEES
T ss_pred HHHHHHcCCCcEEeeCCEEee-CCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECCc------EEEee
Confidence 000000000 0001 13456888889888988999999999999998876 5677776552 79999
Q ss_pred EEEEccCCCC
Q 035902 131 YLVVATGENG 140 (381)
Q Consensus 131 ~vIlAtG~~~ 140 (381)
+||+|+|..+
T Consensus 178 ~VIlAtG~~S 187 (417)
T 3v76_A 178 SLVVASGGKS 187 (417)
T ss_dssp EEEECCCCSS
T ss_pred EEEECCCCcc
Confidence 9999999985
No 104
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.32 E-value=1.2e-11 Score=108.73 Aligned_cols=141 Identities=16% Similarity=0.185 Sum_probs=87.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhC-CCCeEEEecCCCCCC-CcCCC-CCCCeeeecC-CcccccCCCCCCCC--CCCCCCH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNL-SVPNIILEREDCSAS-LWKKR-AYDRMKLHLA-KQFCELPHMPFPSR--TPTFVPR 76 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~-g~~v~lie~~~~~g~-~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~ 76 (381)
++||+|||||++|+++|+.|++. |.+|+|||+...+++ .|... .+..+..... ..++.....++... +......
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 47999999999999999999997 999999999987765 44322 1222211100 00000001111100 0001145
Q ss_pred HHHHHHHHHHHHH-hCCccccccEEEEEEEeCCCCeEEEEEee---------cCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 77 ISFINYVDNYVSQ-MGINPRYHRSVESASYDENAKAWIIVAKN---------TALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 77 ~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~~~v~~~~---------~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.++...+.+.+.+ .+++++++++|.++..++ .....+.+.. +..++...++||.||+|+|..+....
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~-~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~s~~~~ 195 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKG-NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHDGPFGA 195 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEET-TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSSSTTTT
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecC-CeEEEEEEeccccccccCccccCceEEEECCEEEECCCCchHHHH
Confidence 5666666666654 689999999999998765 2222344432 11123467999999999998866543
No 105
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.32 E-value=5.5e-12 Score=117.43 Aligned_cols=138 Identities=20% Similarity=0.280 Sum_probs=88.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCC----CCCcCCCCC--------------------CCeeeecCCcc
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCS----ASLWKKRAY--------------------DRMKLHLAKQF 58 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~----g~~~~~~~~--------------------~~~~~~~~~~~ 58 (381)
++||+|||||++|+++|+.|+++|.+|+|+|+.... |........ ...........
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 489999999999999999999999999999998632 221111000 00000000000
Q ss_pred c--ccCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEc
Q 035902 59 C--ELPHMPF-PSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVA 135 (381)
Q Consensus 59 ~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlA 135 (381)
. .+..... .........+..+...+.+.+++.|++++++++|+++..++ +.+.+.+... .++..++++|.||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~~~v~v~~~-~g~~~~~~a~~vV~A 161 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFG--TDSVTTIEDI-NGNKREIEARFIIDA 161 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEET-TSCEEEEEEEEEEEC
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEEcC-CCCEEEEEcCEEEEC
Confidence 0 0110000 01111245678899999998888899999999999998876 4444444321 123347999999999
Q ss_pred cCCCCCCC
Q 035902 136 TGENGLIP 143 (381)
Q Consensus 136 tG~~~~~~ 143 (381)
+|..+..+
T Consensus 162 ~G~~s~l~ 169 (421)
T 3nix_A 162 SGYGRVIP 169 (421)
T ss_dssp CGGGCHHH
T ss_pred CCCchhhH
Confidence 99885443
No 106
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.31 E-value=2.4e-12 Score=122.86 Aligned_cols=172 Identities=12% Similarity=0.085 Sum_probs=109.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC-CCCCCcCCCCCCCe---ee----e-cCCcc--------cccCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED-CSASLWKKRAYDRM---KL----H-LAKQF--------CELPHMP 65 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~-~~g~~~~~~~~~~~---~~----~-~~~~~--------~~~~~~~ 65 (381)
++||+|||||+||++||+.+++.|.+|+|||++. .+|........... .. . ....+ ..+....
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 4899999999999999999999999999999974 33321100000000 00 0 00000 0000000
Q ss_pred CCCC-----CCCCCCHHHHHHHHHHHHHH-hCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 66 FPSR-----TPTFVPRISFINYVDNYVSQ-MGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 66 ~~~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
.... ......+..+.+.+.+.+++ .++++ ++++|+++..++ +..+.|.+.++ ..+.||.||+|||.+
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~-g~V~GV~t~dG-----~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKN-NQVVGVRTNLG-----VEYKTKAVVVTTGTF 179 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESS-SBEEEEEETTS-----CEEECSEEEECCTTC
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecC-CEEEEEEECCC-----cEEEeCEEEEccCCC
Confidence 0000 00122456788888888887 48887 678899987754 23345666665 579999999999999
Q ss_pred CCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEec
Q 035902 140 GLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRG 201 (381)
Q Consensus 140 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~ 201 (381)
+..+.++|...+. +.+ + |+.++++++..|.++|.++..+.+.
T Consensus 180 s~~~~~~G~~~~~----------------~Gr---~-G~~~A~~la~~L~~lG~~v~~l~tg 221 (637)
T 2zxi_A 180 LNGVIYIGDKMIP----------------GGR---L-GEPRSEGLSDFYRRFDFPLIRFKTG 221 (637)
T ss_dssp BTCEEEETTEEEE----------------CSB---T-TBCCBCTHHHHHHHTTCCCEEEEEE
T ss_pred ccCceeccceecC----------------CCC---C-CchhHHHHHHHHHhcCCceEEecCC
Confidence 8777666654321 122 2 3567899999999999998777654
No 107
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.28 E-value=2.9e-11 Score=108.90 Aligned_cols=130 Identities=15% Similarity=0.249 Sum_probs=78.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcc-----------------------
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQF----------------------- 58 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~----------------------- 58 (381)
+.+||+|||||++|+++|+.|++.|.+|+|||+....|+.+..........+....+
T Consensus 1 m~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (336)
T 1yvv_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAE 80 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEE
T ss_pred CCceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeee
Confidence 148999999999999999999999999999999987776443211111111100000
Q ss_pred -----cccCC--CC-CCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeC
Q 035902 59 -----CELPH--MP-FPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVAR 130 (381)
Q Consensus 59 -----~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d 130 (381)
..... +. .......+.....+....+.+.+ +++++++++|+++..++ +.|.|++.++ ....++|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~i~~~~~v~~i~~~~--~~~~v~~~~g----~~~~~a~ 152 (336)
T 1yvv_A 81 WTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMPVSFSCRITEVFRGE--EHWNLLDAEG----QNHGPFS 152 (336)
T ss_dssp ECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCCEECSCCEEEEEECS--SCEEEEETTS----CEEEEES
T ss_pred ccccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCcEEecCEEEEEEEeC--CEEEEEeCCC----cCccccC
Confidence 00000 00 00000111111112222222222 78899999999998876 5688887665 1334599
Q ss_pred EEEEccCCC
Q 035902 131 YLVVATGEN 139 (381)
Q Consensus 131 ~vIlAtG~~ 139 (381)
+||+|+|..
T Consensus 153 ~vV~a~g~~ 161 (336)
T 1yvv_A 153 HVIIATPAP 161 (336)
T ss_dssp EEEECSCHH
T ss_pred EEEEcCCHH
Confidence 999999987
No 108
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.28 E-value=6.4e-12 Score=113.63 Aligned_cols=129 Identities=16% Similarity=0.256 Sum_probs=82.7
Q ss_pred ccEEEECCCHHHHHHHHHHHh---CCCCeEEEecCCCCCCCcCCCC---CCCeeeecCCcccccCC--------------
Q 035902 4 VPVVIVGAGPAGLATSACLNN---LSVPNIILEREDCSASLWKKRA---YDRMKLHLAKQFCELPH-------------- 63 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~---~g~~v~lie~~~~~g~~~~~~~---~~~~~~~~~~~~~~~~~-------------- 63 (381)
+||+|||||++|+++|+.|++ .|.+|+|||++...||.+.... ......+....++....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 689999999999999999999 8999999999988887544321 11111111111110000
Q ss_pred ---C--CCC---------CCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEe
Q 035902 64 ---M--PFP---------SRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVA 129 (381)
Q Consensus 64 ---~--~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 129 (381)
. ++. .....+.....+..+.+.++++.+.++++++.|+++..++ +.|.|.+.++ ..+.+
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~--~~~~v~~~~g-----~~~~a 154 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRD--DKWEVSKQTG-----SPEQF 154 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECS--SSEEEEESSS-----CCEEE
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcC--CEEEEEECCC-----CEEEc
Confidence 0 000 0000111112233444455555688999999999999865 5688888776 45799
Q ss_pred CEEEEccCCC
Q 035902 130 RYLVVATGEN 139 (381)
Q Consensus 130 d~vIlAtG~~ 139 (381)
|.||+|+...
T Consensus 155 d~vV~A~p~~ 164 (342)
T 3qj4_A 155 DLIVLTMPVP 164 (342)
T ss_dssp SEEEECSCHH
T ss_pred CEEEECCCHH
Confidence 9999999854
No 109
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.27 E-value=9.1e-12 Score=114.26 Aligned_cols=131 Identities=13% Similarity=0.105 Sum_probs=86.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC------------------------CCCCCeeeecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK------------------------RAYDRMKLHLAK 56 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~------------------------~~~~~~~~~~~~ 56 (381)
|+.+||+|||||++|+++|..|++.|.+|+|||+....+..-.. .....+......
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 44589999999999999999999999999999998765421000 000000000000
Q ss_pred cccccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEcc
Q 035902 57 QFCELPHMPFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVAT 136 (381)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAt 136 (381)
.. ...++.+........+..+.+.+.+.+.+.+++++++++|+++.. + + .|++.++ .++++|+||+|+
T Consensus 89 ~~--~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~--~v~~~~g-----~~~~ad~vV~Ad 156 (379)
T 3alj_A 89 KS--VSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-V--G--RLTLQTG-----EVLEADLIVGAD 156 (379)
T ss_dssp EE--EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-T--T--EEEETTS-----CEEECSEEEECC
T ss_pred ce--eeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C--EEEECCC-----CEEEcCEEEECC
Confidence 00 000000000012345788899999888888999999999999976 3 3 5777765 579999999999
Q ss_pred CCCCCCC
Q 035902 137 GENGLIP 143 (381)
Q Consensus 137 G~~~~~~ 143 (381)
|..+...
T Consensus 157 G~~s~vr 163 (379)
T 3alj_A 157 GVGSKVR 163 (379)
T ss_dssp CTTCHHH
T ss_pred CccHHHH
Confidence 9986544
No 110
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.27 E-value=3.4e-12 Score=121.01 Aligned_cols=143 Identities=13% Similarity=0.062 Sum_probs=90.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCee-eecCCccc-ccCCCCCCCCCCCCCCHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMK-LHLAKQFC-ELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 80 (381)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+++.......+... .-...... ....+.. ..-...+..++.
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~l~ 169 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCT--GTLDHISIRQLQ 169 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTC--TTCCEEEHHHHH
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccc--cccccCCHHHHH
Confidence 4799999999999999999999999999999988765421110000000 00000000 0000100 001123457888
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeC-CCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCCC
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDE-NAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVPG 147 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~g 147 (381)
+.+.+.+++.+++++++++|.++..++ +...+.|.+.+...++...+++|+||+|+|..+....+.+
T Consensus 170 ~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 170 LLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPEGFTI 237 (497)
T ss_dssp HHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCTTCEE
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccccccc
Confidence 888888888899999999999998642 1245667764210111235899999999999977655433
No 111
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.26 E-value=4.5e-11 Score=115.23 Aligned_cols=138 Identities=17% Similarity=0.221 Sum_probs=89.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC-----cCC--------CCCC-----------CeeeecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL-----WKK--------RAYD-----------RMKLHLAK 56 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~-----~~~--------~~~~-----------~~~~~~~~ 56 (381)
|+++||+|||||++|+++|+.|++.|.+|+|||+....... +.. .... ........
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecC
Confidence 56799999999999999999999999999999998533211 000 0000 00000000
Q ss_pred c----ccccCCC---CCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEe
Q 035902 57 Q----FCELPHM---PFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVA 129 (381)
Q Consensus 57 ~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 129 (381)
. .+.+... ++.........+..+...+.+.+++.|++++++++|+++..++ ...+.|.+.++ ++...+++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~-g~~~~V~~~~~--G~~~~i~A 177 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSD-PDRVVLTVRRG--GESVTVES 177 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCS-TTCEEEEEEET--TEEEEEEE
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEEecC--CceEEEEc
Confidence 0 0000000 0000111235678899999998988999999999999998763 35567877642 23357999
Q ss_pred CEEEEccCCCCC
Q 035902 130 RYLVVATGENGL 141 (381)
Q Consensus 130 d~vIlAtG~~~~ 141 (381)
|.||.|+|....
T Consensus 178 dlVV~AdG~~S~ 189 (591)
T 3i3l_A 178 DFVIDAGGSGGP 189 (591)
T ss_dssp SEEEECCGGGCH
T ss_pred CEEEECCCCcch
Confidence 999999998853
No 112
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.26 E-value=4.7e-11 Score=114.88 Aligned_cols=134 Identities=20% Similarity=0.192 Sum_probs=86.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCC--------------CCe---eeecCCc-c------
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAY--------------DRM---KLHLAKQ-F------ 58 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~--------------~~~---~~~~~~~-~------ 58 (381)
++||+|||||++|+++|+.|++.|++|+|||+............. ..+ ....... +
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 479999999999999999999999999999998654321110000 000 0000000 0
Q ss_pred -cccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccC
Q 035902 59 -CELPHMPFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATG 137 (381)
Q Consensus 59 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG 137 (381)
+.+..............+..+.+.+.+.+++.+++++++++|+++..++ +.+.|++.+.. +.+.+++|+||.|+|
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~--~~v~v~~~~~~--G~~~~~a~~vV~ADG 204 (570)
T 3fmw_A 129 GLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDA--EAVEVTVAGPS--GPYPVRARYGVGCDG 204 (570)
T ss_dssp CCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCS--SCEEEEEEETT--EEEEEEESEEEECSC
T ss_pred cccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CeEEEEEEeCC--CcEEEEeCEEEEcCC
Confidence 0000011111112246788899999998888899999999999998765 55667764311 125799999999999
Q ss_pred CCC
Q 035902 138 ENG 140 (381)
Q Consensus 138 ~~~ 140 (381)
.+.
T Consensus 205 ~~S 207 (570)
T 3fmw_A 205 GRS 207 (570)
T ss_dssp SSC
T ss_pred CCc
Confidence 884
No 113
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.25 E-value=5.2e-12 Score=120.99 Aligned_cols=172 Identities=15% Similarity=0.164 Sum_probs=105.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC-CCCCCcCCCCCCCee-------ee-cCC--------cccccCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED-CSASLWKKRAYDRMK-------LH-LAK--------QFCELPHMP 65 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~-~~g~~~~~~~~~~~~-------~~-~~~--------~~~~~~~~~ 65 (381)
++||+|||||+||++||+.|++.|.+|+|+|+.. .+|+.+......... .. ... ....+....
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l~ 100 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRMLN 100 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEEC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhcc
Confidence 5899999999999999999999999999999974 344322111000000 00 000 000000000
Q ss_pred ---CCCCC--CCCCCHHHHHHHHHHHHHHh-CCccccccEEEEEEEeCCCCeEE-EEEeecCCCceEEEEeCEEEEccCC
Q 035902 66 ---FPSRT--PTFVPRISFINYVDNYVSQM-GINPRYHRSVESASYDENAKAWI-IVAKNTALDAYEEYVARYLVVATGE 138 (381)
Q Consensus 66 ---~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vIlAtG~ 138 (381)
.+... .....+..+...+.+.+++. ++++ ++.+|.++..++ +... |.+.++ ..+.||.||+|||.
T Consensus 101 ~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d~--g~V~GV~t~~G-----~~i~Ad~VVLATG~ 172 (641)
T 3cp8_A 101 RSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDL-LQDTVIGVSANS--GKFSSVTVRSG-----RAIQAKAAILACGT 172 (641)
T ss_dssp SSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEEET--TEEEEEEETTS-----CEEEEEEEEECCTT
T ss_pred cccCccccchhhhcCHHHHHHHHHHHHHhCCCCEE-EeeEEEEEEecC--CEEEEEEECCC-----cEEEeCEEEECcCC
Confidence 00000 01234567788888888774 8887 566888887765 4333 666555 57999999999999
Q ss_pred CCCCCCCCCCCCCCcceeecCCCCCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEec
Q 035902 139 NGLIPEVPGLGSFEGEYMHSSKYENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRG 201 (381)
Q Consensus 139 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~ 201 (381)
++..+.+.|...+ . ..++ + |+.++++++..|.+.|.+|..+...
T Consensus 173 ~s~~~i~~G~~~~-----~-----------~g~~--v-G~~~a~~la~~L~~~G~kv~~l~tG 216 (641)
T 3cp8_A 173 FLNGLIHIGMDHF-----P-----------GGRS--T-AEPPVEGLTESLASLGFSFGRLKTG 216 (641)
T ss_dssp CBTCEEEETTEEE-----E-----------CSSS--T-TSCCBCSHHHHHHHTTCCEEEEEEE
T ss_pred CCCccceeeeeee-----c-----------cccc--c-CCchhhhhHHHHHhCCceEEeecCC
Confidence 9765443343221 0 0111 1 3677889999999999998776543
No 114
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.25 E-value=7e-11 Score=113.38 Aligned_cols=136 Identities=18% Similarity=0.168 Sum_probs=91.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC------------------------CCCCe------ee
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR------------------------AYDRM------KL 52 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~------------------------~~~~~------~~ 52 (381)
++||+|||||++|+++|+.|+++|.+|+|||+.+..+...... ....+ ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 4899999999999999999999999999999987543211100 00000 00
Q ss_pred ec--CCccc----ccC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCC----eEEEEEe
Q 035902 53 HL--AKQFC----ELP-----HMPFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAK----AWIIVAK 117 (381)
Q Consensus 53 ~~--~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~----~~~v~~~ 117 (381)
.. ...+. .+. ............++..+...+.+.+++.+++++++++|+++..++ + .+++++.
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~~~~~v~v~~~ 162 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHD--DDAGAGVTARLA 162 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEEC--GGGCSEEEEEEE
T ss_pred eccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECC--CCccccEEEEEE
Confidence 00 00000 000 000000112245788899999999988899999999999998876 4 6777777
Q ss_pred ecCCCceEEEEeCEEEEccCCCCCC
Q 035902 118 NTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 118 ~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
++.. ..++++|+||.|+|.+..+
T Consensus 163 ~~~~--~~~i~a~~vV~AdG~~S~v 185 (535)
T 3ihg_A 163 GPDG--EYDLRAGYLVGADGNRSLV 185 (535)
T ss_dssp ETTE--EEEEEEEEEEECCCTTCHH
T ss_pred cCCC--eEEEEeCEEEECCCCcchH
Confidence 6422 4679999999999998543
No 115
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.25 E-value=1.1e-11 Score=116.09 Aligned_cols=132 Identities=16% Similarity=0.273 Sum_probs=86.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC-----CCCC------Ceeeec--CCcc-----------
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK-----RAYD------RMKLHL--AKQF----------- 58 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~-----~~~~------~~~~~~--~~~~----------- 58 (381)
++||+|||||++|+++|+.|++.|.+|+|+|+.+.+++.... ..+. .+.... ...+
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 389999999999999999999999999999998766542110 0000 000000 0000
Q ss_pred -----cccCCCCCC-----CCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEE
Q 035902 59 -----CELPHMPFP-----SRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYV 128 (381)
Q Consensus 59 -----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~ 128 (381)
+.....++. ..++.......+.+.+.+.+++.+++++++++|+++..++ ++.+.|.+.++ ..++
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~~~~G-----~~i~ 179 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVILQTG-----EVLE 179 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTC-----CEEE
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEEECCC-----CEEE
Confidence 000000000 0001111356788888888888899999999999998765 23377877665 4699
Q ss_pred eCEEEEccCCCC
Q 035902 129 ARYLVVATGENG 140 (381)
Q Consensus 129 ~d~vIlAtG~~~ 140 (381)
+|.||+|+|..+
T Consensus 180 Ad~VVlAtGg~s 191 (447)
T 2i0z_A 180 TNHVVIAVGGKS 191 (447)
T ss_dssp CSCEEECCCCSS
T ss_pred CCEEEECCCCCc
Confidence 999999999986
No 116
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.24 E-value=1.4e-11 Score=114.19 Aligned_cols=134 Identities=15% Similarity=0.267 Sum_probs=86.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC------cCC------------------CCCCCeeeecCC-
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL------WKK------------------RAYDRMKLHLAK- 56 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~------~~~------------------~~~~~~~~~~~~- 56 (381)
+++||+|||||++|+++|+.|+++|.+|+|||+.+..... +.. .....+......
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 3589999999999999999999999999999998754210 000 001111111100
Q ss_pred --cccccCCCCCC---CCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCE
Q 035902 57 --QFCELPHMPFP---SRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARY 131 (381)
Q Consensus 57 --~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~ 131 (381)
....++..... ........+..+.+.+.+.+.+ ++++++++|+++..++ +.+.+++.++ +.+++|.
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v~v~~~~g-----~~~~a~~ 172 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDA--DGVTVWFTDG-----SSASGDL 172 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEET--TEEEEEETTS-----CEEEESE
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecC--CcEEEEEcCC-----CEEeeCE
Confidence 00000000000 0111234567788888877766 6889999999999876 5677888776 5899999
Q ss_pred EEEccCCCCCCCC
Q 035902 132 LVVATGENGLIPE 144 (381)
Q Consensus 132 vIlAtG~~~~~~~ 144 (381)
||.|+|.+..+..
T Consensus 173 vV~AdG~~S~vr~ 185 (407)
T 3rp8_A 173 LIAADGSHSALRP 185 (407)
T ss_dssp EEECCCTTCSSHH
T ss_pred EEECCCcChHHHH
Confidence 9999999865543
No 117
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.24 E-value=2e-11 Score=115.78 Aligned_cols=135 Identities=20% Similarity=0.239 Sum_probs=89.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC--------------CCCCCeeeecCCc---c----ccc
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK--------------RAYDRMKLHLAKQ---F----CEL 61 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~--------------~~~~~~~~~~~~~---~----~~~ 61 (381)
++||+||||||+|+++|..|++.|++|+|||+.......... ...+.+....... + ..+
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 90 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPIDF 90 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceeccc
Confidence 589999999999999999999999999999998654321100 0000000000000 0 000
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCC
Q 035902 62 PHMPFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~ 141 (381)
.....+.......++..+.+.+.+.+++.+++++++++|+++..++ +.+++++.++. + .+++++|+||.|+|.+..
T Consensus 91 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~~-g-~~~~~a~~vVgADG~~S~ 166 (500)
T 2qa1_A 91 GVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVTVEVRGPE-G-KHTLRAAYLVGCDGGRSS 166 (500)
T ss_dssp GGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEEEEEEETT-E-EEEEEESEEEECCCTTCH
T ss_pred ccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEEEEEEcCC-C-CEEEEeCEEEECCCcchH
Confidence 0000000001234567888999998988899999999999998876 56677777652 1 357999999999999843
No 118
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.22 E-value=3.4e-11 Score=114.21 Aligned_cols=135 Identities=16% Similarity=0.205 Sum_probs=89.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC--------------CCCCCeee--ecC-Ccc----ccc
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK--------------RAYDRMKL--HLA-KQF----CEL 61 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~--------------~~~~~~~~--~~~-~~~----~~~ 61 (381)
++||+||||||+|+++|..|++.|++|+|||+.......... .....+.. ... ..+ ..+
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 489999999999999999999999999999998654321110 00000000 000 000 000
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCC
Q 035902 62 PHMPFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~ 141 (381)
.....+.......++..+.+.|.+.+.+.+++++++++|+++..++ +.+++++.++. + .+++++|+||.|+|.+..
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~~-g-~~~~~a~~vVgADG~~S~ 167 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG--DHVVVEVEGPD-G-PRSLTTRYVVGCDGGRST 167 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEEEEEECSS-C-EEEEEEEEEEECCCTTCH
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEEcCC-C-cEEEEeCEEEEccCcccH
Confidence 0000000001234577888999998888899999999999998876 45667777652 2 357999999999999843
No 119
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.22 E-value=4.6e-11 Score=110.28 Aligned_cols=135 Identities=16% Similarity=0.201 Sum_probs=84.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCC-----CCcCCCCCCCee------e-------ecCC--ccccc
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSA-----SLWKKRAYDRMK------L-------HLAK--QFCEL 61 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g-----~~~~~~~~~~~~------~-------~~~~--~~~~~ 61 (381)
+++||+|||||++|+++|+.|++.|.+|+|||+.+..+ +.+.......+. . ..+. .++..
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~ 104 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADE 104 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECC
Confidence 45899999999999999999999999999999986432 222110000000 0 0000 00000
Q ss_pred C-----CC--CCC-CCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEE
Q 035902 62 P-----HM--PFP-SRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLV 133 (381)
Q Consensus 62 ~-----~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vI 133 (381)
. .. +.. ........+..+.+.+.+.+. +..++++++|+++..++ +.+.|++.++ ..+++|+||
T Consensus 105 ~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~--~~v~v~~~~g-----~~~~ad~vV 175 (398)
T 2xdo_A 105 KGNILSTKNVKPENRFDNPEINRNDLRAILLNSLE--NDTVIWDRKLVMLEPGK--KKWTLTFENK-----PSETADLVI 175 (398)
T ss_dssp SSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC--TTSEEESCCEEEEEECS--SSEEEEETTS-----CCEEESEEE
T ss_pred CCCchhhccccccCCCCCceECHHHHHHHHHhhcC--CCEEEECCEEEEEEECC--CEEEEEECCC-----cEEecCEEE
Confidence 0 00 000 000113456677777766554 35788999999998865 5577887766 468999999
Q ss_pred EccCCCCCCCCC
Q 035902 134 VATGENGLIPEV 145 (381)
Q Consensus 134 lAtG~~~~~~~~ 145 (381)
.|+|..+.....
T Consensus 176 ~AdG~~S~vR~~ 187 (398)
T 2xdo_A 176 LANGGMSKVRKF 187 (398)
T ss_dssp ECSCTTCSCCTT
T ss_pred ECCCcchhHHhh
Confidence 999999665543
No 120
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.21 E-value=3.8e-11 Score=114.18 Aligned_cols=131 Identities=19% Similarity=0.324 Sum_probs=84.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCC-------CCcCCCCCC------------------CeeeecCC--
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSA-------SLWKKRAYD------------------RMKLHLAK-- 56 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g-------~~~~~~~~~------------------~~~~~~~~-- 56 (381)
+||+|||||++|+++|+.|++.|++|+|||+...++ +.|...... .+......
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~~ 187 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDPN 187 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCTT
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEecccc
Confidence 799999999999999999999999999999986541 112110000 00000000
Q ss_pred c-------ccccCCCCCCCCCCC--CC---CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCce
Q 035902 57 Q-------FCELPHMPFPSRTPT--FV---PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAY 124 (381)
Q Consensus 57 ~-------~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~ 124 (381)
. .+.....+....... +. ....+.+.+.+.+++.|++++++++|+++..++ ++.+.|.+.++
T Consensus 188 ~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-~~v~gV~l~~G----- 261 (549)
T 3nlc_A 188 FYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQITGVTLSNG----- 261 (549)
T ss_dssp CHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS-SBEEEEEETTS-----
T ss_pred ccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-CEEEEEEECCC-----
Confidence 0 000000000000000 11 135677788888888899999999999998765 23455777766
Q ss_pred EEEEeCEEEEccCCCC
Q 035902 125 EEYVARYLVVATGENG 140 (381)
Q Consensus 125 ~~~~~d~vIlAtG~~~ 140 (381)
+.+.+|.||+|+|.++
T Consensus 262 ~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp CEEECSCEEECCCTTC
T ss_pred CEEECCEEEECCCCCh
Confidence 5799999999999986
No 121
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.21 E-value=5e-11 Score=111.98 Aligned_cols=140 Identities=13% Similarity=0.098 Sum_probs=88.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCC--CCCcCCCC-----CCCeee---------ecCCccccc-CC--
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCS--ASLWKKRA-----YDRMKL---------HLAKQFCEL-PH-- 63 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~--g~~~~~~~-----~~~~~~---------~~~~~~~~~-~~-- 63 (381)
++||+|||||++|+++|+.|++.|.+|+|+|+.+.. +..+.... +..+.. ........+ +.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 489999999999999999999999999999998653 22211100 000000 000000000 00
Q ss_pred --CCCCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEE-EEEeecCCCceEEEEeCEEEEccCCCC
Q 035902 64 --MPFPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWI-IVAKNTALDAYEEYVARYLVVATGENG 140 (381)
Q Consensus 64 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vIlAtG~~~ 140 (381)
..++ .......+..+.+.+.+.+.+.|++++++++|+++..++ +... |++.+...++...++||.||+|+|..+
T Consensus 86 ~~~~~~-~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s 162 (453)
T 3atr_A 86 TVWTVN-GEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVEATGYSR 162 (453)
T ss_dssp CEEEEE-EEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEECCGGGC
T ss_pred eEEeEC-CCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEECcCCch
Confidence 0000 001134677888888888888899999999999998765 4432 555431112335799999999999986
Q ss_pred CCCCC
Q 035902 141 LIPEV 145 (381)
Q Consensus 141 ~~~~~ 145 (381)
.....
T Consensus 163 ~vr~~ 167 (453)
T 3atr_A 163 SFRSK 167 (453)
T ss_dssp TTGGG
T ss_pred hhHHh
Confidence 65543
No 122
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.20 E-value=2e-10 Score=110.98 Aligned_cols=139 Identities=21% Similarity=0.270 Sum_probs=88.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhC------CCCeEEEecCCCCCCCcCCCC--------------------CCC------e
Q 035902 3 EVPVVIVGAGPAGLATSACLNNL------SVPNIILEREDCSASLWKKRA--------------------YDR------M 50 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~------g~~v~lie~~~~~g~~~~~~~--------------------~~~------~ 50 (381)
++||+|||||++|+++|+.|++. |.+|+|||+...+++...... ... +
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 38999999999999999999999 999999999876654211000 000 0
Q ss_pred eeecCCcccccCCCC---CCCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeec---CCCce
Q 035902 51 KLHLAKQFCELPHMP---FPSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNT---ALDAY 124 (381)
Q Consensus 51 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~---~~~~~ 124 (381)
..........++..+ ..........+.++.+.|.+.+++.|++++++++|.++..+++.....|.+.+. ..++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~ 194 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAP 194 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCE
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCc
Confidence 000000001111001 000001134677899999999988899999999999998765323333555420 01111
Q ss_pred -------EEEEeCEEEEccCCCCC
Q 035902 125 -------EEYVARYLVVATGENGL 141 (381)
Q Consensus 125 -------~~~~~d~vIlAtG~~~~ 141 (381)
.++++|+||+|+|.+..
T Consensus 195 ~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 195 KTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp EEEEECCCEEECSEEEECCCTTCH
T ss_pred ccccCCceEEECCEEEEeeCCCch
Confidence 47999999999999853
No 123
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.19 E-value=1.8e-10 Score=109.78 Aligned_cols=139 Identities=17% Similarity=0.198 Sum_probs=87.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCC----CCCCcCCC----------CCC-----Cee------eecCCc
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDC----SASLWKKR----------AYD-----RMK------LHLAKQ 57 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~----~g~~~~~~----------~~~-----~~~------~~~~~~ 57 (381)
++||+|||||++|+++|+.|++.|++|+|||+... .|..+... ... ... ......
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~ 86 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKE 86 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCC
Confidence 48999999999999999999999999999999862 22211100 000 000 000000
Q ss_pred c----cccCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeE-EEEEeecCCCceEEEEeCE
Q 035902 58 F----CELPHMPFP-SRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAW-IIVAKNTALDAYEEYVARY 131 (381)
Q Consensus 58 ~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~d~ 131 (381)
. ..+...+.. ........+..+.+.+.+.+.+.|++++++++|+++..++ +.. .|.+.+. .++...+++|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~-dG~~~~i~ad~ 163 (512)
T 3e1t_A 87 PEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNT-EGVELMAHARF 163 (512)
T ss_dssp SSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECS-SSCEEEEEEEE
T ss_pred ccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeC-CCCEEEEEcCE
Confidence 0 000000000 0111235678899999999988999999999999998865 332 2444331 12335899999
Q ss_pred EEEccCCCCCCCC
Q 035902 132 LVVATGENGLIPE 144 (381)
Q Consensus 132 vIlAtG~~~~~~~ 144 (381)
||+|+|.+.....
T Consensus 164 VI~AdG~~S~vr~ 176 (512)
T 3e1t_A 164 IVDASGNRTRVSQ 176 (512)
T ss_dssp EEECCCTTCSSGG
T ss_pred EEECCCcchHHHH
Confidence 9999999865544
No 124
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.19 E-value=2.5e-10 Score=105.84 Aligned_cols=139 Identities=17% Similarity=0.152 Sum_probs=85.8
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCC-eEEEecCCCCCCCcCCC--------------C----------CCCeeeecC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVP-NIILEREDCSASLWKKR--------------A----------YDRMKLHLA 55 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~-v~lie~~~~~g~~~~~~--------------~----------~~~~~~~~~ 55 (381)
|+++||+|||||++|+++|..|++.|.+ |+|||+.+..+...... . ...+.....
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~ 81 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQ 81 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcC
Confidence 4568999999999999999999999999 99999987543211000 0 000000000
Q ss_pred Cc--ccccCCC-CCCCCCC-CCCCHHHHHHHHHHHHHH-hC-CccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEe
Q 035902 56 KQ--FCELPHM-PFPSRTP-TFVPRISFINYVDNYVSQ-MG-INPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVA 129 (381)
Q Consensus 56 ~~--~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 129 (381)
.. ....+.. ......+ ....+..+.+.+.+.+.+ .+ +.++++++|+++.. + +.+.+++.+...++..++++
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~--~~v~v~~~~~~~g~~~~~~a 158 (410)
T 3c96_A 82 SGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-R--DGRVLIGARDGHGKPQALGA 158 (410)
T ss_dssp TSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E--TTEEEEEEEETTSCEEEEEE
T ss_pred CCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C--CccEEEEecCCCCCceEEec
Confidence 00 0000000 0000111 134567888888887765 46 57999999999987 4 34667776521123357999
Q ss_pred CEEEEccCCCCCC
Q 035902 130 RYLVVATGENGLI 142 (381)
Q Consensus 130 d~vIlAtG~~~~~ 142 (381)
|+||.|+|..+.+
T Consensus 159 d~vV~AdG~~S~v 171 (410)
T 3c96_A 159 DVLVGADGIHSAV 171 (410)
T ss_dssp SEEEECCCTTCHH
T ss_pred CEEEECCCccchh
Confidence 9999999998543
No 125
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.19 E-value=5.4e-11 Score=108.46 Aligned_cols=61 Identities=10% Similarity=0.073 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 75 PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
....+.+.+.+.+++.|++++++++|+++..++ ++.+.|.+.++ +...+++|.||+|+|.+
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~g---~~~~~~a~~VV~A~G~~ 208 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQLVFHTPLIAGRVRP-EGGFELDFGGA---EPMTLSCRVLINAAGLH 208 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEECT-TSSEEEEECTT---SCEEEEEEEEEECCGGG
T ss_pred CHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcC-CceEEEEECCC---ceeEEEeCEEEECCCcc
Confidence 455778888888888899999999999998865 24477777654 23579999999999998
No 126
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.18 E-value=3.4e-11 Score=111.05 Aligned_cols=140 Identities=17% Similarity=0.211 Sum_probs=86.7
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCC------CC--CcCC--------CC----------CCCeeeecC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCS------AS--LWKK--------RA----------YDRMKLHLA 55 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~------g~--~~~~--------~~----------~~~~~~~~~ 55 (381)
+++||+|||||++|+++|+.|++.|.+|+|+|+.+.. +. .+.. .. ...+.....
T Consensus 1 m~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 80 (394)
T 1k0i_A 1 MKTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA 80 (394)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET
T ss_pred CCccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC
Confidence 1589999999999999999999999999999987631 11 1100 00 000111000
Q ss_pred CcccccCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEE-eecCCCceEEEEeCEEE
Q 035902 56 KQFCELPHMPFP-SRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVA-KNTALDAYEEYVARYLV 133 (381)
Q Consensus 56 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~-~~~~~~~~~~~~~d~vI 133 (381)
.....+...... ........+.++.+.+.+.+.+.+++++++++|+++..+++ +.+.|++ .++ +..++++|+||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~~v~~~~~g---~~~~~~a~~vV 156 (394)
T 1k0i_A 81 GQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQG-ERPYVTFERDG---ERLRLDCDYIA 156 (394)
T ss_dssp TEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSCEEEEEETT---EEEEEECSEEE
T ss_pred CceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecC-CceEEEEecCC---cEEEEEeCEEE
Confidence 000000000000 00111235667778888777777999999999999986532 3455776 444 22379999999
Q ss_pred EccCCCCCCCCC
Q 035902 134 VATGENGLIPEV 145 (381)
Q Consensus 134 lAtG~~~~~~~~ 145 (381)
.|+|..+.....
T Consensus 157 ~AdG~~S~vr~~ 168 (394)
T 1k0i_A 157 GCDGFHGISRQS 168 (394)
T ss_dssp ECCCTTCSTGGG
T ss_pred ECCCCCcHHHHh
Confidence 999999665543
No 127
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.18 E-value=3.6e-10 Score=108.57 Aligned_cols=134 Identities=18% Similarity=0.243 Sum_probs=86.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC----------------------CCCC------eeeec
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR----------------------AYDR------MKLHL 54 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~----------------------~~~~------~~~~~ 54 (381)
++||+||||||+|+++|..|++.|.+|+|||+....+...... .... .....
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 3799999999999999999999999999999987554221110 0000 00000
Q ss_pred --CCcccccCCCCC--------CCCCCCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCce
Q 035902 55 --AKQFCELPHMPF--------PSRTPTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAY 124 (381)
Q Consensus 55 --~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~ 124 (381)
...+..+..... ........++..+.+.+.+.+++. ++++++|+++..++ +.+++++.+...++.
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~--~~v~v~~~~~~~G~~ 180 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRD--DHVRATITDLRTGAT 180 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECS--SCEEEEEEETTTCCE
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeC--CEEEEEEEECCCCCE
Confidence 000101110000 000012345777888888887765 88999999998866 456777776333344
Q ss_pred EEEEeCEEEEccCCCCC
Q 035902 125 EEYVARYLVVATGENGL 141 (381)
Q Consensus 125 ~~~~~d~vIlAtG~~~~ 141 (381)
.++++|+||.|+|.+..
T Consensus 181 ~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 181 RAVHARYLVACDGASSP 197 (549)
T ss_dssp EEEEEEEEEECCCTTCH
T ss_pred EEEEeCEEEECCCCCcH
Confidence 67999999999999843
No 128
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.17 E-value=1.4e-10 Score=107.02 Aligned_cols=132 Identities=12% Similarity=0.098 Sum_probs=82.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCC-----CcCC-CC---CCCeee-----ecCCc---cccc-CC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSAS-----LWKK-RA---YDRMKL-----HLAKQ---FCEL-PH 63 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~-----~~~~-~~---~~~~~~-----~~~~~---~~~~-~~ 63 (381)
..+||+|||||++|+++|..|++.|++|+|+|+.+.... .... .. ...+.. ..+.. +... ..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 83 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTG 83 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCC
Confidence 458999999999999999999999999999999865311 0000 00 000000 00000 0000 00
Q ss_pred CCCC-CCC-CCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCC
Q 035902 64 MPFP-SRT-PTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 64 ~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~ 141 (381)
.... ... .....+..+.+.+.+.+ .+++++++++|+++..++ +.+.|++.++ ..+++|+||.|+|..+.
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~--~~v~v~~~~g-----~~~~ad~vV~AdG~~S~ 154 (397)
T 2vou_A 84 ERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDS--ETVQMRFSDG-----TKAEANWVIGADGGASV 154 (397)
T ss_dssp CEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECS--SCEEEEETTS-----CEEEESEEEECCCTTCH
T ss_pred CccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecC--CEEEEEECCC-----CEEECCEEEECCCcchh
Confidence 0000 000 01233456666666554 378899999999998865 5577888765 57999999999999854
Q ss_pred C
Q 035902 142 I 142 (381)
Q Consensus 142 ~ 142 (381)
+
T Consensus 155 v 155 (397)
T 2vou_A 155 V 155 (397)
T ss_dssp H
T ss_pred H
Confidence 3
No 129
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.17 E-value=7e-11 Score=109.10 Aligned_cols=133 Identities=13% Similarity=0.099 Sum_probs=87.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC------cCC--------CC----------CCCeeeecCC--
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL------WKK--------RA----------YDRMKLHLAK-- 56 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~------~~~--------~~----------~~~~~~~~~~-- 56 (381)
++||+|||||++|+++|+.|++.|.+|+|||+....... +.. .. ...+......
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 489999999999999999999999999999998654110 000 00 0000000000
Q ss_pred cccccCCCCCC-CCCCCCCCHHHHHHHHHHHHHHh-CCccccccEEEEEEEeCCCCeE--EEEEeecCCCceEEEEeCEE
Q 035902 57 QFCELPHMPFP-SRTPTFVPRISFINYVDNYVSQM-GINPRYHRSVESASYDENAKAW--IIVAKNTALDAYEEYVARYL 132 (381)
Q Consensus 57 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~--~v~~~~~~~~~~~~~~~d~v 132 (381)
....+...... ..+.....+..+.+.+.+.+++. +++++++++|+++..++ +.+ .|++.++ ..+++|.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~~~g-----~~~~ad~v 158 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRLNDG-----RVLRPRVV 158 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEETTS-----CEEEEEEE
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEECCC-----CEEECCEE
Confidence 00000000000 00112356788899998888887 88999999999998865 445 6777665 47999999
Q ss_pred EEccCCCCCC
Q 035902 133 VVATGENGLI 142 (381)
Q Consensus 133 IlAtG~~~~~ 142 (381)
|+|+|.++..
T Consensus 159 V~AdG~~s~v 168 (399)
T 2x3n_A 159 VGADGIASYV 168 (399)
T ss_dssp EECCCTTCHH
T ss_pred EECCCCChHH
Confidence 9999998543
No 130
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.16 E-value=1.9e-10 Score=107.63 Aligned_cols=57 Identities=11% Similarity=0.106 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHHHhCCcccccc---EEEEEEEeCCCCeEE-EEEeecCCCceEEEEeCEEEEccCCC
Q 035902 76 RISFINYVDNYVSQMGINPRYHR---SVESASYDENAKAWI-IVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~---~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
...+...+.+.+++.|+++++++ +|+++..++ +.+. |.+.++ ..++||.||+|+|.+
T Consensus 160 ~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G-----~~i~Ad~VV~AtG~~ 220 (438)
T 3dje_A 160 ARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADG-----KIWRAERTFLCAGAS 220 (438)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTT-----EEEECSEEEECCGGG
T ss_pred HHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCC-----CEEECCEEEECCCCC
Confidence 45778888888888899999999 999998865 5666 777766 689999999999998
No 131
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.14 E-value=6.5e-10 Score=107.38 Aligned_cols=138 Identities=16% Similarity=0.144 Sum_probs=87.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC--CCC----CCee-----eecCCc--------------
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK--RAY----DRMK-----LHLAKQ-------------- 57 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~--~~~----~~~~-----~~~~~~-------------- 57 (381)
++||+|||||++|+++|+.|+++|.+|+|||+.+..++.... ..+ ..+. .+....
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 489999999999999999999999999999999877763211 100 0000 000000
Q ss_pred ----------------ccccCCCCCC-------CCCCC-------CCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeC
Q 035902 58 ----------------FCELPHMPFP-------SRTPT-------FVPRISFINYVDNYVSQMGINPRYHRSVESASYDE 107 (381)
Q Consensus 58 ----------------~~~~~~~~~~-------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 107 (381)
++.-...++. ..++. ......+.+.|.+.+++.+++++++++|+++..++
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 285 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEVLKDD 285 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEECT
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEeEEcC
Confidence 0000001110 00010 12356788888888888999999999999998754
Q ss_pred CCCeEEEEEeecCCCceEEEEeCEEEEccCCCCC
Q 035902 108 NAKAWIIVAKNTALDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~ 141 (381)
+...+.|.+.+. .++...+++|.||+|||.+..
T Consensus 286 ~g~v~Gv~~~~~-~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 286 KGTVKGILVKGM-YKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp TSCEEEEEEEET-TTEEEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEeC-CCcEEEEECCeEEEeCCCccc
Confidence 233333555431 123357999999999999743
No 132
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.14 E-value=5.3e-10 Score=106.25 Aligned_cols=63 Identities=22% Similarity=0.192 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 75 PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
....+...+.+.+.+.|++++.+++|+++..++ +.|.|.+.+...++...+++|.||+|+|.+
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~ 209 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPW 209 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGG
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChh
Confidence 355677777888888899999999999998875 667788765333344579999999999998
No 133
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.13 E-value=2.9e-10 Score=103.85 Aligned_cols=56 Identities=18% Similarity=0.183 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 76 RISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
...+.+.+.+.+++.|++++.+++|+++..++ +.+.+++.++ .+++|.||+|+|.+
T Consensus 148 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~v~~~~g------~~~a~~vV~a~G~~ 203 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCAQLFNCPVTAIRHDD--DGVTIETADG------EYQAKKAIVCAGTW 203 (372)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEEESSC------EEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcC--CEEEEEECCC------eEEcCEEEEcCCcc
Confidence 34677778888888899999999999998865 4466766554 49999999999987
No 134
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.12 E-value=7.9e-10 Score=106.28 Aligned_cols=64 Identities=23% Similarity=0.141 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 75 PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
....+...+...+.+.|+.++.+++|+++..++ ++.+.|.+.+...++...+++|.||+|+|.+
T Consensus 168 d~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~ 231 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPW 231 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCGGG
T ss_pred cHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 345666777777888899999999999998875 2345678776544555789999999999998
No 135
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.10 E-value=4.6e-10 Score=110.66 Aligned_cols=58 Identities=16% Similarity=0.288 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 75 PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
....+...+.+.+++.|++++++++|+++..++ +.|.|.+.++ ..+++|.||+|+|.+
T Consensus 415 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v~V~t~~G-----~~i~Ad~VVlAtG~~ 472 (676)
T 3ps9_A 415 CPAELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCWLLNFAGD-----QQATHSVVVLANGHQ 472 (676)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEEEEETTS-----CEEEESEEEECCGGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeEEEEECCC-----CEEECCEEEECCCcc
Confidence 346777788888888899999999999999876 5677777665 469999999999998
No 136
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.09 E-value=1e-09 Score=105.82 Aligned_cols=138 Identities=19% Similarity=0.239 Sum_probs=87.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC--CCC----CCee----e-ecCC---------------
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK--RAY----DRMK----L-HLAK--------------- 56 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~--~~~----~~~~----~-~~~~--------------- 56 (381)
++||+|||||++|+++|+.|++.|.+|+|||+.+..++.... ... ..+. . +...
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~ 200 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQND 200 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 479999999999999999999999999999999877653211 000 0000 0 0000
Q ss_pred ---------------cccccCCCCCC-------CCCC-------CCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeC
Q 035902 57 ---------------QFCELPHMPFP-------SRTP-------TFVPRISFINYVDNYVSQMGINPRYHRSVESASYDE 107 (381)
Q Consensus 57 ---------------~~~~~~~~~~~-------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 107 (381)
.++.-...++. ..++ .......+.+.|.+.+++.+++++++++|+++..++
T Consensus 201 ~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~ 280 (566)
T 1qo8_A 201 IKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVKLVVND 280 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEEEEECT
T ss_pred HHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEECC
Confidence 00000001110 0001 112366788888888888899999999999998754
Q ss_pred CCCeEEEEEeecCCCceEEEEeCEEEEccCCCCC
Q 035902 108 NAKAWIIVAKNTALDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~ 141 (381)
++....|.+.+. .++...+++|.||+|||....
T Consensus 281 ~g~v~Gv~~~~~-~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 281 DHSVVGAVVHGK-HTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp TSBEEEEEEEET-TTEEEEEEEEEEEECCCCCTT
T ss_pred CCcEEEEEEEeC-CCcEEEEEcCEEEEecCCccc
Confidence 223333555431 123347999999999999854
No 137
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.06 E-value=9.1e-10 Score=107.63 Aligned_cols=139 Identities=19% Similarity=0.242 Sum_probs=88.6
Q ss_pred cccEEEECCCHHHHHHHHHHHh-CCCCeEEEecCCCCCCCcCCC--------------C----------CCCeeeecC--
Q 035902 3 EVPVVIVGAGPAGLATSACLNN-LSVPNIILEREDCSASLWKKR--------------A----------YDRMKLHLA-- 55 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~-~g~~v~lie~~~~~g~~~~~~--------------~----------~~~~~~~~~-- 55 (381)
++||+||||||+|+++|+.|++ .|.+|+|||+.+......... . ...+.....
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 4799999999999999999999 999999999986543221110 0 000000000
Q ss_pred ---Cccc---ccCCCCCC-CCC-CCCCCHHHHHHHHHHHHHHhCC--ccccccEEEEEEEeCC--CCeEEEEEeec---C
Q 035902 56 ---KQFC---ELPHMPFP-SRT-PTFVPRISFINYVDNYVSQMGI--NPRYHRSVESASYDEN--AKAWIIVAKNT---A 120 (381)
Q Consensus 56 ---~~~~---~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~i~~~~~--~~~~~v~~~~~---~ 120 (381)
.... .++..... ... ....++..+.+.|.+.+++.++ +++++++|+++..+++ ...+.+++.+. .
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~ 191 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAH 191 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGG
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccC
Confidence 0000 00000000 000 1235678899999999988876 8999999999987652 12466776641 1
Q ss_pred CCceEEEEeCEEEEccCCCCC
Q 035902 121 LDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 121 ~~~~~~~~~d~vIlAtG~~~~ 141 (381)
.++.+++++|+||.|+|.+..
T Consensus 192 ~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 192 AGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp TTCEEEEEEEEEEECCCTTCH
T ss_pred CCCeEEEEeCEEEECCCcchH
Confidence 223467999999999999843
No 138
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.05 E-value=1.2e-09 Score=97.10 Aligned_cols=139 Identities=20% Similarity=0.236 Sum_probs=83.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCC-CcCCCC-CCCeeeecC-CcccccCCCCCCC--CCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSAS-LWKKRA-YDRMKLHLA-KQFCELPHMPFPS--RTPTFVP 75 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~-~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~~ 75 (381)
++||+|||||++|+++|+.|+++ |.+|+|||+...+++ .|.... +........ ..++.....++.. .+.....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 48999999999999999999997 999999999987764 564322 222221110 0011101111110 0111122
Q ss_pred HHHHHHHHHHHHHH-hCCccccccEEEEEEEeCCC---------------C--e-EEEEEe------ecCC---CceEEE
Q 035902 76 RISFINYVDNYVSQ-MGINPRYHRSVESASYDENA---------------K--A-WIIVAK------NTAL---DAYEEY 127 (381)
Q Consensus 76 ~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~~~---------------~--~-~~v~~~------~~~~---~~~~~~ 127 (381)
..++.+.+.+.+.+ .+++++.++.+.++..+++. + . -.|.+. ++.. .+...+
T Consensus 159 ~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i 238 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTI 238 (344)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEE
T ss_pred HHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEE
Confidence 45666666666666 58899999999888765410 1 1 112222 1111 234689
Q ss_pred EeCEEEEccCCCCC
Q 035902 128 VARYLVVATGENGL 141 (381)
Q Consensus 128 ~~d~vIlAtG~~~~ 141 (381)
++++||+|||....
T Consensus 239 ~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 239 NAPVIISTTGHDGP 252 (344)
T ss_dssp ECSEEEECCCSSSS
T ss_pred EcCEEEECCCCCch
Confidence 99999999998844
No 139
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.05 E-value=1.5e-09 Score=107.19 Aligned_cols=58 Identities=12% Similarity=0.207 Sum_probs=47.3
Q ss_pred CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceE-EEEeCEEEEccCCC
Q 035902 75 PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYE-EYVARYLVVATGEN 139 (381)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~-~~~~d~vIlAtG~~ 139 (381)
....+...+.+.+++.|++++++++|+++..++ +.|.|.+.++ . .+++|.||+|+|.+
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v~V~t~~G-----~~~i~Ad~VVlAtG~~ 468 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMTCHYQHELQRLKRID--SQWQLTFGQS-----QAAKHHATVILATGHR 468 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCEEEESCCEEEEEECS--SSEEEEEC-C-----CCCEEESEEEECCGGG
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC--CeEEEEeCCC-----cEEEECCEEEECCCcc
Confidence 345677778888888899999999999999876 4577877765 4 68999999999998
No 140
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.05 E-value=1.3e-09 Score=100.01 Aligned_cols=57 Identities=9% Similarity=-0.049 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEE-EEEeecCCCceEEEEeCEEEEccCCC
Q 035902 75 PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWI-IVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
....+...+.+.+++.|++++.+++|+++..++ +.+. |.+.+ ..+++|.||+|+|.+
T Consensus 147 ~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~------g~i~a~~VV~A~G~~ 204 (382)
T 1y56_B 147 DPFEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNK------GIIKTGIVVNATNAW 204 (382)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETT------EEEECSEEEECCGGG
T ss_pred CHHHHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECC------cEEECCEEEECcchh
Confidence 456777888888888899999999999998765 5555 65543 269999999999988
No 141
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.05 E-value=1.4e-09 Score=100.36 Aligned_cols=56 Identities=16% Similarity=0.122 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 76 RISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
...+...+.+.+++.|++++++++|+++..++ +.+.|.+.+ ..+++|.||+|+|.+
T Consensus 152 ~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v~v~t~~------g~i~a~~VV~A~G~~ 207 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGATLRAGETVTELVPDA--DGVSVTTDR------GTYRAGKVVLACGPY 207 (397)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEEEEEESS------CEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeEEEEECC------CEEEcCEEEEcCCcC
Confidence 34566777777788899999999999998765 456665543 269999999999987
No 142
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.04 E-value=8.1e-10 Score=101.27 Aligned_cols=60 Identities=20% Similarity=0.111 Sum_probs=47.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCC
Q 035902 73 FVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENG 140 (381)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~ 140 (381)
......+.+.+.+.+++.|++++.+++|+++..++ +.+.|.+.+ ..+++|.||+|+|.+.
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~v~~~~------g~~~a~~vV~A~G~~s 219 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EALFIKTPS------GDVWANHVVVASGVWS 219 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSEEEEETT------EEEEEEEEEECCGGGT
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEEEEEcCC------ceEEcCEEEECCChhH
Confidence 34567788888888888899999999999998765 455566543 2689999999999873
No 143
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.03 E-value=2.1e-09 Score=98.73 Aligned_cols=56 Identities=21% Similarity=0.197 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 76 RISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
...+...+.+.+++.|++++.+++|+++..++ +.+.|.+.+ ..+++|.||+|+|.+
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~~------g~~~a~~vV~A~G~~ 204 (389)
T 2gf3_A 149 SENCIRAYRELAEARGAKVLTHTRVEDFDISP--DSVKIETAN------GSYTADKLIVSMGAW 204 (389)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SCEEEEETT------EEEEEEEEEECCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecC--CeEEEEeCC------CEEEeCEEEEecCcc
Confidence 45777888888888899999999999998865 456666543 369999999999987
No 144
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.01 E-value=1.2e-09 Score=100.11 Aligned_cols=57 Identities=14% Similarity=0.033 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 75 PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
....+...+.+.+++.|++++++++|+++..++ +.+.|.+.+ ..++||.||+|+|.+
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~~~V~t~~------g~i~a~~VV~A~G~~ 208 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GAWEVRCDA------GSYRAAVLVNAAGAW 208 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCEEESSCCCCEEEEET--TEEEEECSS------EEEEESEEEECCGGG
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--CeEEEEeCC------CEEEcCEEEECCChh
Confidence 445677778888888899999999999998876 557777655 379999999999987
No 145
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.01 E-value=9.3e-10 Score=101.82 Aligned_cols=130 Identities=16% Similarity=0.198 Sum_probs=75.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCc-------CCC---CCCCe--------------------eee
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLW-------KKR---AYDRM--------------------KLH 53 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~-------~~~---~~~~~--------------------~~~ 53 (381)
.+|+||||||+|+++|..|+++|++|+|||+.+...... ... ....+ ...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 579999999999999999999999999999976442110 000 00000 000
Q ss_pred c-CCcccccCCC--CCCCCCCC----CCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEE
Q 035902 54 L-AKQFCELPHM--PFPSRTPT----FVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEE 126 (381)
Q Consensus 54 ~-~~~~~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~ 126 (381)
. .......... +....... ...+..+.+.+. +..+..++++++++++...+ ++..+|++.+| ++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~---~~~~~~v~~~~~v~~~~~~~-~~~v~v~~~dG-----~~ 152 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILN---KGLANTIQWNKTFVRYEHIE-NGGIKIFFADG-----SH 152 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHH---TTCTTTEECSCCEEEEEECT-TSCEEEEETTS-----CE
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHH---hhccceEEEEEEEEeeeEcC-CCeEEEEECCC-----CE
Confidence 0 0000000000 00000000 112334444332 23345688999999998765 35567888887 67
Q ss_pred EEeCEEEEccCCCCCC
Q 035902 127 YVARYLVVATGENGLI 142 (381)
Q Consensus 127 ~~~d~vIlAtG~~~~~ 142 (381)
+++|+||.|.|.+..+
T Consensus 153 ~~adlvVgADG~~S~v 168 (412)
T 4hb9_A 153 ENVDVLVGADGSNSKV 168 (412)
T ss_dssp EEESEEEECCCTTCHH
T ss_pred EEeeEEEECCCCCcch
Confidence 9999999999998543
No 146
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.00 E-value=8.2e-10 Score=105.94 Aligned_cols=63 Identities=13% Similarity=0.240 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 74 VPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
..+..+.+.+.+.+++.|++++.+ +|+++..+++...+.|.+.++ ..+++|+||+|+|.+...
T Consensus 162 i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g-----~~i~ad~vV~A~G~~s~~ 224 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEG-----RTLEADLFIDCSGMRGLL 224 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTS-----CEECCSEEEECCGGGCCC
T ss_pred EeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCC-----cEEEeCEEEECCCCchhh
Confidence 345788888888888889999888 899998754323345666654 479999999999998654
No 147
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.99 E-value=3.8e-09 Score=93.26 Aligned_cols=139 Identities=18% Similarity=0.193 Sum_probs=82.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCC-CcCCCC-CCCeeeecC-CcccccCCCCCCCC--CCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSAS-LWKKRA-YDRMKLHLA-KQFCELPHMPFPSR--TPTFVP 75 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~-~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~ 75 (381)
++||+|||||++|+++|+.|++. |.+|+|+|+....|+ .|.... +........ ..+......++... +.....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~ 144 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKH 144 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcc
Confidence 36999999999999999999998 999999999888764 564321 111111110 01111111111111 011113
Q ss_pred HHHHHHHHHHHHHH-hCCccccccEEEEEEEeCC-C-C---eEEEEEee------c---CCCceEEEEe-----------
Q 035902 76 RISFINYVDNYVSQ-MGINPRYHRSVESASYDEN-A-K---AWIIVAKN------T---ALDAYEEYVA----------- 129 (381)
Q Consensus 76 ~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~~-~-~---~~~v~~~~------~---~~~~~~~~~~----------- 129 (381)
..++...+.+.+.+ .+++++.+++|.++..+.+ + + ..-|.+.. + ...+...+.+
T Consensus 145 ~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~ 224 (326)
T 2gjc_A 145 AALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDL 224 (326)
T ss_dssp HHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCS
T ss_pred hHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccc
Confidence 45666777776666 4889999999999977631 1 1 11233321 1 1123467899
Q ss_pred ----CEEEEccCCCCC
Q 035902 130 ----RYLVVATGENGL 141 (381)
Q Consensus 130 ----d~vIlAtG~~~~ 141 (381)
++||.|||....
T Consensus 225 ~~~~~~VV~ATG~~~~ 240 (326)
T 2gjc_A 225 SQKHGVILSTTGHDGP 240 (326)
T ss_dssp STTCCEEEECCCCC--
T ss_pred cccCCEEEECcCCCch
Confidence 999999998743
No 148
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.99 E-value=8.4e-09 Score=101.06 Aligned_cols=140 Identities=16% Similarity=0.202 Sum_probs=87.6
Q ss_pred cccEEEECCCHHHHHHHHHHHh-----CCCCeEEEecCCCCCCCcCC------------------------CCCCCeeee
Q 035902 3 EVPVVIVGAGPAGLATSACLNN-----LSVPNIILEREDCSASLWKK------------------------RAYDRMKLH 53 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~-----~g~~v~lie~~~~~g~~~~~------------------------~~~~~~~~~ 53 (381)
++||+||||||+|+++|..|++ .|++|+|||+.+........ ..+..+...
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 4799999999999999999999 99999999987533211000 001111111
Q ss_pred cCC---ccc---ccCCCC-CCCCCC-CCCCHHHHHHHHHHHHHHhC---CccccccEEEEEEEeC------CCCeEEEEE
Q 035902 54 LAK---QFC---ELPHMP-FPSRTP-TFVPRISFINYVDNYVSQMG---INPRYHRSVESASYDE------NAKAWIIVA 116 (381)
Q Consensus 54 ~~~---~~~---~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~i~~~~------~~~~~~v~~ 116 (381)
... ... .++... ....+. ....+..+.+.|.+.+.+.+ +.++++++++++..++ +....++++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~ 167 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTL 167 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEE
Confidence 000 000 000000 000111 23567888899888888776 8999999999998764 112355665
Q ss_pred eec---------------------------------------CCCceEEEEeCEEEEccCCCCCC
Q 035902 117 KNT---------------------------------------ALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 117 ~~~---------------------------------------~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+. ..++.+++++|+||.|.|.+..+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~V 232 (665)
T 1pn0_A 168 RYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWV 232 (665)
T ss_dssp EECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHH
T ss_pred EecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHH
Confidence 542 12344679999999999998543
No 149
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.98 E-value=4.7e-09 Score=99.94 Aligned_cols=61 Identities=23% Similarity=0.274 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeC-EEEEccCCCC
Q 035902 78 SFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVAR-YLVVATGENG 140 (381)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d-~vIlAtG~~~ 140 (381)
.+...+.+.+++.++++++++.|+++..+++.....|.+.++ ++...++++ .||+|||...
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~--g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQY--GKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEET--TEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEEC--CcEEEEEeCCeEEEeCCChh
Confidence 788888888888899999999999998873233333555542 234579995 9999999985
No 150
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.97 E-value=3.1e-09 Score=98.12 Aligned_cols=58 Identities=12% Similarity=-0.001 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 75 PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
....+...+.+.+++.|++++++++|+++..++ ++.+.|.+.++ .+++|.||+|+|.+
T Consensus 172 ~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~~g------~~~a~~vV~a~G~~ 229 (405)
T 2gag_B 172 KHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVKTTRG------TIHAGKVALAGAGH 229 (405)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEEETTC------CEEEEEEEECCGGG
T ss_pred CHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEEeCCc------eEECCEEEECCchh
Confidence 455778888888888899999999999998764 24455666543 58999999999987
No 151
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.96 E-value=1.7e-08 Score=97.35 Aligned_cols=138 Identities=18% Similarity=0.162 Sum_probs=86.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC--CCC----CCe----ee-ecCCc--------------
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK--RAY----DRM----KL-HLAKQ-------------- 57 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~--~~~----~~~----~~-~~~~~-------------- 57 (381)
.+||+|||||++|+++|+.|++.|.+|+|+|+.+..++.... ..+ ... .. +....
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 379999999999999999999999999999999877653211 000 000 00 00000
Q ss_pred ----------------ccccCCCCCC-----C--CCCC-------CCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeC
Q 035902 58 ----------------FCELPHMPFP-----S--RTPT-------FVPRISFINYVDNYVSQMGINPRYHRSVESASYDE 107 (381)
Q Consensus 58 ----------------~~~~~~~~~~-----~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~ 107 (381)
++.-...++. . ..+. ......+...|.+.+++.+++++++++|+++..++
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~ 285 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDA 285 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC-
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEEEEECC
Confidence 0000000110 0 0010 12356788888888888899999999999997653
Q ss_pred CCCeEEEEEeecCCCceEEEEeCEEEEccCCCCC
Q 035902 108 NAKAWIIVAKNTALDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 108 ~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~ 141 (381)
+...+.|.+.+. .++...+.+|.||+|||..+.
T Consensus 286 ~g~v~GV~~~~~-~G~~~~i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 286 SGKVTGVLVKGE-YTGYYVIKADAVVIAAGGFAK 318 (572)
T ss_dssp -CCEEEEEEEET-TTEEEEEECSEEEECCCCCTT
T ss_pred CCeEEEEEEEeC-CCcEEEEEcCEEEEeCCCCcc
Confidence 123334555431 123457999999999998864
No 152
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.93 E-value=5.5e-09 Score=100.38 Aligned_cols=63 Identities=16% Similarity=0.250 Sum_probs=49.6
Q ss_pred CCHHHHHHHHHHHHHHh-CCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 74 VPRISFINYVDNYVSQM-GINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 74 ~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
..+..+.+.+.+.+++. |++++++ +|+++..+++.....|.+.++ ..+++|.||+|+|..+..
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G-----~~i~ad~vI~A~G~~S~~ 254 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATG-----RVFDADLFVDCSGFRGLL 254 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTS-----CEEECSEEEECCGGGCCC
T ss_pred EcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCC-----CEEECCEEEECCCCchhh
Confidence 46778899999999888 9999999 999998754323345666555 579999999999998654
No 153
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.90 E-value=2.4e-09 Score=102.11 Aligned_cols=63 Identities=21% Similarity=0.245 Sum_probs=49.3
Q ss_pred CCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 74 VPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
..+..+.+.+.+.+.+.|++++.+ +|+++..+++.....|.+.++ +.+++|.||.|+|.+...
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g-----~~~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQH-----GEISGDLFVDCTGFRGLL 232 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSS-----CEEECSEEEECCGGGCCC
T ss_pred EcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCC-----CEEEcCEEEECCCcchHH
Confidence 457788889988888889999999 899998754323345666655 479999999999998554
No 154
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.90 E-value=1.5e-09 Score=94.81 Aligned_cols=43 Identities=23% Similarity=0.401 Sum_probs=38.6
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK 44 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~ 44 (381)
+.+||+||||||+|++||+.|+++|++|+|||+++.+||....
T Consensus 1 Mt~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 1 MTVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 0489999999999999999999999999999999998886543
No 155
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.90 E-value=1.9e-08 Score=97.11 Aligned_cols=137 Identities=15% Similarity=0.062 Sum_probs=83.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCC--CcCCC----CCCC-----ee--e-e---cCCc--------
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSAS--LWKKR----AYDR-----MK--L-H---LAKQ-------- 57 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~--~~~~~----~~~~-----~~--~-~---~~~~-------- 57 (381)
++||+|||||++|++||+.|++.|.+|+|+|+....++ .+... .... .. . + ....
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 86 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIE 86 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 48999999999999999999999999999999875532 11110 0000 00 0 0 0000
Q ss_pred -----------ccccCCCCCCCC---------CCCC-----------------CCHHHHHHHHHHHHHHhCCccccccEE
Q 035902 58 -----------FCELPHMPFPSR---------TPTF-----------------VPRISFINYVDNYVSQMGINPRYHRSV 100 (381)
Q Consensus 58 -----------~~~~~~~~~~~~---------~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~v 100 (381)
++.-...++... +... .....+...+.+.+.+.+++++.++.|
T Consensus 87 ~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v 166 (588)
T 2wdq_A 87 YMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTIFSEWYA 166 (588)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCEEEETEEE
T ss_pred HHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCEEEeCcEE
Confidence 000001111100 0000 113567778888888889999999999
Q ss_pred EEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 101 ESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 101 ~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
+++..+++.....|...+...++...+.++.||+|||..
T Consensus 167 ~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~ 205 (588)
T 2wdq_A 167 LDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGA 205 (588)
T ss_dssp EEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCC
T ss_pred EEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCC
Confidence 999875222333455544223344579999999999987
No 156
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.89 E-value=8.8e-09 Score=95.98 Aligned_cols=37 Identities=24% Similarity=0.368 Sum_probs=35.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSAS 40 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~ 40 (381)
+||+|||||++|++||+.|++.|.+|+|+|+++.+||
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG 38 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGG 38 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBT
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccC
Confidence 7999999999999999999999999999999887776
No 157
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.89 E-value=7.8e-09 Score=98.81 Aligned_cols=63 Identities=14% Similarity=0.269 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHHHHH-hCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 74 VPRISFINYVDNYVSQ-MGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 74 ~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
..+..+.+.+.+.+++ .|++++.+ +|+++..+++.....|.+.++ .++++|+||.|+|.+...
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g-----~~i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQN-----GEISGQLFIDCTGAKSLL 235 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSS-----CEEECSEEEECSGGGCCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCC-----CEEEcCEEEECCCcchHH
Confidence 4567888899888888 89999888 599998764222334656554 359999999999998655
No 158
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.89 E-value=7.8e-09 Score=97.05 Aligned_cols=101 Identities=20% Similarity=0.235 Sum_probs=81.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||++|+.+|..|++.|.+|+|+|+.+.+. + ....++.+.+
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------~--~~~~~~~~~l 214 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-------------------------------P--TMDLEVSRAA 214 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-------------------------------c--ccCHHHHHHH
Confidence 679999999999999999999999999999876321 0 0124677777
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.+++++++++|.+++.++ +.+.+.+.++ ..+.+|.||+|+|..|+.+.
T Consensus 215 ~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~v~~~~g-----~~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 215 ERVFKKQGLTIRTGVRVTAVVPEA--KGARVELEGG-----EVLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp HHHHHHHTCEEECSCCEEEEEEET--TEEEEEETTS-----CEEEESEEEECSCEEECCTT
T ss_pred HHHHHHCCCEEEECCEEEEEEEeC--CEEEEEECCC-----eEEEcCEEEECcCCCcCCCC
Confidence 888888899999999999998765 4555665544 57999999999999987653
No 159
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.87 E-value=2.2e-09 Score=99.23 Aligned_cols=35 Identities=26% Similarity=0.440 Sum_probs=32.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCS 38 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~ 38 (381)
+||+|||||++|+++|+.|+++ |.+|+|||+....
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 8999999999999999999999 9999999997533
No 160
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.87 E-value=9.8e-09 Score=94.14 Aligned_cols=101 Identities=13% Similarity=0.055 Sum_probs=81.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.++++|||||+.|+.+|..|++.|.+|+++++.+.+.. . ....++.+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------------~-~~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP-------------------------------G-LLHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh-------------------------------c-ccCHHHHHH
Confidence 36899999999999999999999999999998763211 0 112467778
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
+.+.+++.|++++++++|.++..++ +.+.+.+.++ +.+.+|.||+|+|..|+.
T Consensus 193 l~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~g-----~~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 193 VQAGLEGLGVRFHLGPVLASLKKAG--EGLEAHLSDG-----EVIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp HHHHHHTTTCEEEESCCEEEEEEET--TEEEEEETTS-----CEEEESEEEECSCEEECC
T ss_pred HHHHHHHcCCEEEeCCEEEEEEecC--CEEEEEECCC-----CEEECCEEEECcCCCcCH
Confidence 8888888899999999999998765 4556777665 579999999999999765
No 161
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.87 E-value=8.3e-09 Score=95.94 Aligned_cols=38 Identities=26% Similarity=0.379 Sum_probs=35.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL 41 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~ 41 (381)
+||+|||||++|++||+.|+++|.+|+|+|+++.+||.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~ 38 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGR 38 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTT
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCc
Confidence 48999999999999999999999999999999888763
No 162
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.85 E-value=4.3e-09 Score=98.65 Aligned_cols=36 Identities=31% Similarity=0.433 Sum_probs=33.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCC-CCeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLS-VPNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g-~~v~lie~~~ 36 (381)
|+++||+|||||++|+++|+.|+++| .+|+|||++.
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~ 57 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGH 57 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCC
Confidence 66689999999999999999999999 8999999933
No 163
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.85 E-value=3.4e-08 Score=93.27 Aligned_cols=107 Identities=20% Similarity=0.269 Sum_probs=82.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+|+++.+.+.. ....++.+.+
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~l 230 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA---------------------------------SMDGEVAKAT 230 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS---------------------------------SSCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc---------------------------------ccCHHHHHHH
Confidence 6899999999999999999999999999999864321 0124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|++++++++|.++..+++.+...+.+.+...++...+.+|.||+|+|..|+..
T Consensus 231 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 231 QKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECCT
T ss_pred HHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCCC
Confidence 888888999999999999998731124455666532122236799999999999998765
No 164
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.84 E-value=1.8e-08 Score=94.79 Aligned_cols=106 Identities=15% Similarity=0.156 Sum_probs=82.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+|+|+.+.+. + ....++.+.+
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 216 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEIL-------------------------------P--QGDPETAALL 216 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------T--TSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHHH
Confidence 679999999999999999999999999999876321 0 0124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.|++++++++|.+++.++ +...+.+.+...++...+.+|.||+|+|..|+...
T Consensus 217 ~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 217 RRALEKEGIRVRTKTKAVGYEKKK--DGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTCCSCEEEEESEEEECSCEEESCTT
T ss_pred HHHHHhcCCEEEcCCEEEEEEEeC--CEEEEEEeecCCCceeEEEcCEEEECCCcccCCCC
Confidence 888888899999999999998765 44556665211122347999999999999987654
No 165
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.84 E-value=6e-09 Score=96.80 Aligned_cols=38 Identities=32% Similarity=0.404 Sum_probs=35.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL 41 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~ 41 (381)
+||+|||||++|+++|+.|+++|.+|+|+|+++.+||.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~ 38 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGR 38 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCce
Confidence 47999999999999999999999999999999888773
No 166
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.83 E-value=3.2e-08 Score=95.27 Aligned_cols=63 Identities=11% Similarity=0.027 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 76 RISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
...+...+...+.+.|+.++.+++|+++..++ +..+.|.+.+...++...++||.||+|+|.+
T Consensus 187 ~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~-~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~w 249 (571)
T 2rgh_A 187 DARLVIDNIKKAAEDGAYLVSKMKAVGFLYEG-DQIVGVKARDLLTDEVIEIKAKLVINTSGPW 249 (571)
T ss_dssp HHHHHHHHHHHHHHTTCEEESSEEEEEEEEET-TEEEEEEEEETTTCCEEEEEBSCEEECCGGG
T ss_pred hHHHHHHHHHHHHHcCCeEEeccEEEEEEEeC-CEEEEEEEEEcCCCCEEEEEcCEEEECCChh
Confidence 34455556666778899999999999998875 2345577654323333579999999999998
No 167
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.82 E-value=3.3e-08 Score=96.33 Aligned_cols=64 Identities=19% Similarity=0.252 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCC
Q 035902 76 RISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENG 140 (381)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~ 140 (381)
...+...+.+.+.+.+++++.++.|+++..++ +....+...+...++...+.++.||+|||...
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 45677788888888899999999999998754 22223444332233445799999999999883
No 168
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.82 E-value=3.7e-08 Score=95.26 Aligned_cols=137 Identities=20% Similarity=0.168 Sum_probs=81.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC--CCeEEEecCCCCCC--CcCCCC----C---CCeee---e---cCCc--------
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLS--VPNIILEREDCSAS--LWKKRA----Y---DRMKL---H---LAKQ-------- 57 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g--~~v~lie~~~~~g~--~~~~~~----~---~~~~~---~---~~~~-------- 57 (381)
++||+|||||++|+++|+.|++.| .+|+|||+....++ .|.... . +.... + ....
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 84 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVD 84 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 489999999999999999999999 99999999864432 111100 0 00000 0 0000
Q ss_pred -----------ccccCCCCCCC---------CCCC-------C---CCHHHHHHHHHHHHHHhC-CccccccEEEEEEEe
Q 035902 58 -----------FCELPHMPFPS---------RTPT-------F---VPRISFINYVDNYVSQMG-INPRYHRSVESASYD 106 (381)
Q Consensus 58 -----------~~~~~~~~~~~---------~~~~-------~---~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~ 106 (381)
++.....++.. .+.. + .+...+...+.+.+.+.+ ++++.++.|+++..+
T Consensus 85 ~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~ 164 (602)
T 1kf6_A 85 YFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLDILVD 164 (602)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEe
Confidence 00000011100 0000 0 114567777777777777 899999999999876
Q ss_pred CCCCeEEEEEeecCCCceEEEEeCEEEEccCCCC
Q 035902 107 ENAKAWIIVAKNTALDAYEEYVARYLVVATGENG 140 (381)
Q Consensus 107 ~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~ 140 (381)
+ +....+...+...++...+.++.||+|||...
T Consensus 165 ~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 165 D-GHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp T-TEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred C-CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 5 22222433332223335799999999999973
No 169
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.82 E-value=3.2e-08 Score=92.85 Aligned_cols=104 Identities=15% Similarity=0.200 Sum_probs=81.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +. ...++.+.+
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 217 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL-------------------------------SG--FEKQMAAII 217 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999876321 10 124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.|++++++++|.++..++ +...+.+.+. ++...+.+|.||+|+|..|+...
T Consensus 218 ~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~--g~~~~~~~D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 218 KKRLKKKGVEVVTNALAKGAEERE--DGVTVTYEAN--GETKTIDADYVLVTVGRRPNTDE 274 (455)
T ss_dssp HHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEET--TEEEEEEESEEEECSCEEESCSS
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeC--CeEEEEEEeC--CceeEEEcCEEEECcCCCcccCc
Confidence 888888899999999999998765 4455555421 12267999999999999987643
No 170
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.80 E-value=1.3e-08 Score=97.17 Aligned_cols=137 Identities=15% Similarity=0.121 Sum_probs=76.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC--cCCCCCCCee--------------------ee-------
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL--WKKRAYDRMK--------------------LH------- 53 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~--~~~~~~~~~~--------------------~~------- 53 (381)
++||+|||||++|+++|+.|++ |.+|+|+|+....++. |......... .+
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g~s~~a~Ggi~~~~~~~ds~~~~~~d~l~~g~g~~d~~~v~~~ 86 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEGSTFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFV 86 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-------------CCSHHHHHHHHHHHHHHTTTCCCHHHHHHH
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCCChhhcCCCEEEecCCCCCHHHHHHHHHHhhcccCCHHHHHHH
Confidence 3899999999999999999999 9999999998765431 1111000000 00
Q ss_pred ---cC--CcccccCCCCCCCC--------C----------CC-C----CCHHHHHHHHHHHHHH-hCCccccccEEEEEE
Q 035902 54 ---LA--KQFCELPHMPFPSR--------T----------PT-F----VPRISFINYVDNYVSQ-MGINPRYHRSVESAS 104 (381)
Q Consensus 54 ---~~--~~~~~~~~~~~~~~--------~----------~~-~----~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~i~ 104 (381)
.+ ..++.....++... + +. + .+...+.+.+.+.+++ .+++++.++.|+++.
T Consensus 87 ~~~~~~~i~~l~~~Gv~f~~~~~~~~~g~~~~~~~gg~~~~r~~~~~d~~g~~l~~~L~~~~~~~~gv~i~~~~~v~~L~ 166 (540)
T 1chu_A 87 ASNARSCVQWLIDQGVLFDTHIQPNGEESYHLTREGGHSHRRILHAADATGREVETTLVSKALNHPNIRVLERTNAVDLI 166 (540)
T ss_dssp HHHHHHHHHHHHHTTCC--------------------------------------CCCHHHHHHCTTEEEECSEEEEEEE
T ss_pred HHhHHHHHHHHHHcCCCcccCcccCcCCccccccccccccCeEEEeCCCCHHHHHHHHHHHHHcCCCCEEEeCcEEEEEE
Confidence 00 00000001111000 0 00 0 1223455555666666 689999999999998
Q ss_pred EeCCC------CeEEEEEeecCCCceEEEEeCEEEEccCCCC
Q 035902 105 YDENA------KAWIIVAKNTALDAYEEYVARYLVVATGENG 140 (381)
Q Consensus 105 ~~~~~------~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~ 140 (381)
.+++. ....|.+.+...++...+.++.||+|||...
T Consensus 167 ~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 167 VSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp EGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred EcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 73322 2333555542223445799999999999884
No 171
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.80 E-value=3.8e-08 Score=95.27 Aligned_cols=137 Identities=18% Similarity=0.106 Sum_probs=83.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC--cCCC----CCCCeeeecCC--------------------
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL--WKKR----AYDRMKLHLAK-------------------- 56 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~--~~~~----~~~~~~~~~~~-------------------- 56 (381)
++||+|||||+||++||+.|++.|.+|+|+|+....++. +... ....+..+...
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v~ 97 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIH 97 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 379999999999999999999999999999998644321 1110 00000000000
Q ss_pred ----------cccccCCCCCCCC---------CCC---------------C---CCHHHHHHHHHHHHHHhCCccccccE
Q 035902 57 ----------QFCELPHMPFPSR---------TPT---------------F---VPRISFINYVDNYVSQMGINPRYHRS 99 (381)
Q Consensus 57 ----------~~~~~~~~~~~~~---------~~~---------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (381)
.++.-...++... +.. + .+...+...+.+.+.+.+++++.++.
T Consensus 98 ~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~i~~~~~ 177 (621)
T 2h88_A 98 YMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTSYFVEYF 177 (621)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCEEEETEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCEEEEceE
Confidence 0000001111000 000 0 12446777787777778999999999
Q ss_pred EEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCC
Q 035902 100 VESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENG 140 (381)
Q Consensus 100 v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~ 140 (381)
|+++..++ +....|...+...++...+.++.||+|||...
T Consensus 178 v~~Li~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 217 (621)
T 2h88_A 178 ALDLLMEN-GECRGVIALCIEDGTIHRFRAKNTVIATGGYG 217 (621)
T ss_dssp EEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred EEEEEEEC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCccc
Confidence 99998764 22233454432233446799999999999883
No 172
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.80 E-value=2.6e-08 Score=93.32 Aligned_cols=101 Identities=15% Similarity=0.156 Sum_probs=81.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+|+++.+.+. +. -..++.+.+
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 214 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-------------------------------PS--FDPMISETL 214 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-------------------------------hh--hhHHHHHHH
Confidence 679999999999999999999999999999876321 00 123677778
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|++++++++|.++..++ ++...+.+.++ +.+.+|.||+|+|..|+..
T Consensus 215 ~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~g-----~~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 215 VEVMNAEGPQLHTNAIPKAVVKNT-DGSLTLELEDG-----RSETVDCLIWAIGREPAND 268 (450)
T ss_dssp HHHHHHHSCEEECSCCEEEEEECT-TSCEEEEETTS-----CEEEESEEEECSCEEESCT
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeC-CcEEEEEECCC-----cEEEcCEEEECCCCCcCCC
Confidence 888888899999999999998754 23355777665 5799999999999998765
No 173
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.79 E-value=2.7e-08 Score=93.44 Aligned_cols=100 Identities=17% Similarity=0.139 Sum_probs=80.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. +. -..++.+.+
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 213 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------------------------------FQ--FDPLLSATL 213 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------------------------------cc--cCHHHHHHH
Confidence 679999999999999999999999999999876321 00 123566777
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceE-EEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYE-EYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~-~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.++++++++.|.++..++ +...+.+.++ + .+.+|.||+|+|..|+..
T Consensus 214 ~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~G-----~~~i~~D~vv~a~G~~p~~~ 267 (463)
T 2r9z_A 214 AENMHAQGIETHLEFAVAALERDA--QGTTLVAQDG-----TRLEGFDSVIWAVGRAPNTR 267 (463)
T ss_dssp HHHHHHTTCEEESSCCEEEEEEET--TEEEEEETTC-----CEEEEESEEEECSCEEESCT
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeC--CeEEEEEeCC-----cEEEEcCEEEECCCCCcCCC
Confidence 888888899999999999998764 3356777665 4 799999999999998764
No 174
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.77 E-value=4.1e-08 Score=99.01 Aligned_cols=58 Identities=10% Similarity=0.042 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCC
Q 035902 75 PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
....+...+.+.+++.|++++.+++|+++..++ ++.+.|.+.+ ..++||.||+|+|.+
T Consensus 149 ~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~-~~v~~V~t~~------G~i~Ad~VV~AaG~~ 206 (830)
T 1pj5_A 149 SAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG-GRVTGVQTAD------GVIPADIVVSCAGFW 206 (830)
T ss_dssp CHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETT------EEEECSEEEECCGGG
T ss_pred cHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC-CEEEEEEECC------cEEECCEEEECCccc
Confidence 455778888888888899999999999998865 2323455544 369999999999987
No 175
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.77 E-value=7.4e-09 Score=97.57 Aligned_cols=38 Identities=24% Similarity=0.337 Sum_probs=35.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC------CCeEEEecCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLS------VPNIILEREDCSAS 40 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g------~~v~lie~~~~~g~ 40 (381)
.+||+|||||++|++||+.|++.| .+|+|+|+++.+||
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 379999999999999999999999 89999999988876
No 176
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.76 E-value=1.9e-08 Score=94.23 Aligned_cols=104 Identities=17% Similarity=0.205 Sum_probs=80.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.++++|||||++|+.+|..|++.|.+|+++|+.+.+... ....++.+.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 196 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV--------------------------------YLDKEFTDV 196 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------TCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc--------------------------------cCCHHHHHH
Confidence 378999999999999999999999999999998632110 012467788
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVP 146 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~ 146 (381)
+.+.+++.|+++++++.|.++..++ +.+.+.+ ++ ..+.+|.||+|+|..|+.+.++
T Consensus 197 l~~~l~~~gv~i~~~~~v~~i~~~~--~v~~v~~-~~-----~~i~~d~vi~a~G~~p~~~~~~ 252 (447)
T 1nhp_A 197 LTEEMEANNITIATGETVERYEGDG--RVQKVVT-DK-----NAYDADLVVVAVGVRPNTAWLK 252 (447)
T ss_dssp HHHHHHTTTEEEEESCCEEEEECSS--BCCEEEE-SS-----CEEECSEEEECSCEEESCGGGT
T ss_pred HHHHHHhCCCEEEcCCEEEEEEccC--cEEEEEE-CC-----CEEECCEEEECcCCCCChHHHH
Confidence 8888888899999999999987642 3223444 33 4699999999999998765433
No 177
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.76 E-value=9e-08 Score=90.67 Aligned_cols=106 Identities=15% Similarity=0.144 Sum_probs=84.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.+
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~l 245 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTIL-------------------------------G--GMDGEVAKQL 245 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------S--SSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecccccc-------------------------------c--cCCHHHHHHH
Confidence 679999999999999999999999999999876321 0 0124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.++++++++++.++..++ +...+.+.+...++...+.+|.||+|+|..|+...
T Consensus 246 ~~~l~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 246 QRMLTKQGIDFKLGAKVTGAVKSG--DGAKVTFEPVKGGEATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTSCCCEEEEESEEEECCCCEECCTT
T ss_pred HHHHHhCCCEEEECCeEEEEEEeC--CEEEEEEEecCCCceEEEEcCEEEEeeCCccCCCc
Confidence 888888899999999999998765 55567776532233467999999999999977653
No 178
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.74 E-value=6.4e-08 Score=89.66 Aligned_cols=102 Identities=18% Similarity=0.197 Sum_probs=82.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+. + .....++.+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l-------------------------------~-~~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVL-------------------------------A-RVAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------T-TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchh-------------------------------h-hhcCHHHHHH
Confidence 3679999999999999999999999999999886321 0 0112577888
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
+.+.+++.|+++++++.|.++..++ .+...|.+.++ +.+.+|.||+|+|..|+.
T Consensus 200 l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~v~l~dG-----~~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 200 YQAEHRAHGVDLRTGAAMDCIEGDG-TKVTGVRMQDG-----SVIPADIVIVGIGIVPCV 253 (415)
T ss_dssp HHHHHHHTTCEEEETCCEEEEEESS-SBEEEEEESSS-----CEEECSEEEECSCCEESC
T ss_pred HHHHHHhCCCEEEECCEEEEEEecC-CcEEEEEeCCC-----CEEEcCEEEECCCCccCh
Confidence 8888899999999999999998754 23335777776 679999999999999775
No 179
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.73 E-value=9.6e-08 Score=90.08 Aligned_cols=108 Identities=13% Similarity=0.144 Sum_probs=81.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. +. ....++.+.+
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~l 226 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVG-------------------------------GV-GIDMEISKNF 226 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------CS-SCCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccC-------------------------------Cc-ccCHHHHHHH
Confidence 679999999999999999999999999999886321 00 0124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.|++++++++|.++..++ ++...+.+.+...++...+.+|.||+|+|..|+...
T Consensus 227 ~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~~ 286 (474)
T 1zmd_A 227 QRILQKQGFKFKLNTKVTGATKKS-DGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTKN 286 (474)
T ss_dssp HHHHHHTTCEEECSEEEEEEEECT-TSCEEEEEEETTSCCCEEEEESEEEECSCEEECCTT
T ss_pred HHHHHHCCCEEEeCceEEEEEEcC-CceEEEEEEecCCCCceEEEcCEEEECcCCCcCCCc
Confidence 888888999999999999998764 222456543211112367999999999999987643
No 180
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.73 E-value=3.3e-08 Score=92.77 Aligned_cols=101 Identities=19% Similarity=0.193 Sum_probs=78.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. + ....++.+.+
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 218 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERIL-------------------------------P--TYDSELTAPV 218 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccc-------------------------------c--ccCHHHHHHH
Confidence 689999999999999999999999999999986331 1 0124677777
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.|++++++++|.+++. + + ..+...++ +...+.+|.||+|+|..|+.+.
T Consensus 219 ~~~l~~~gv~i~~~~~v~~i~~-~--~-v~v~~~~G---~~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 219 AESLKKLGIALHLGHSVEGYEN-G--C-LLANDGKG---GQLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp HHHHHHHTCEEETTCEEEEEET-T--E-EEEECSSS---CCCEECCSCEEECCCEEECCSS
T ss_pred HHHHHHCCCEEEECCEEEEEEe-C--C-EEEEECCC---ceEEEECCEEEECcCCCcCCCC
Confidence 8888888999999999999875 3 2 33432122 2257899999999999987654
No 181
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.72 E-value=8.1e-08 Score=91.16 Aligned_cols=101 Identities=17% Similarity=0.121 Sum_probs=80.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++.+.+
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~l 223 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-------------------------------RK--FDESVINVL 223 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-------------------------------cc--cchhhHHHH
Confidence 579999999999999999999999999999876321 00 124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEE-EEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEE-YVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~-~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|+++++++.|.++..+++ +...+.+.++ +. +.+|.||+|+|..|+..
T Consensus 224 ~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~v~~~~g-----~~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 224 ENDMKKNNINIVTFADVVEIKKVSD-KNLSIHLSDG-----RIYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp HHHHHHTTCEEECSCCEEEEEESST-TCEEEEETTS-----CEEEEESEEEECCCBCCTTT
T ss_pred HHHHHhCCCEEEECCEEEEEEEcCC-ceEEEEECCC-----cEEEECCEEEECCCCCcCCC
Confidence 8888889999999999999987542 3355776655 34 89999999999998764
No 182
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.71 E-value=3.7e-08 Score=93.00 Aligned_cols=40 Identities=25% Similarity=0.360 Sum_probs=36.0
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCCCCCCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSV--PNIILEREDCSASL 41 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~~~g~~ 41 (381)
+.+||+|||||++|++||++|+++|. +|+|+|+++.+||.
T Consensus 1 m~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~ 42 (477)
T 3nks_A 1 MGRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGW 42 (477)
T ss_dssp -CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTT
T ss_pred CCceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCc
Confidence 03799999999999999999999999 99999999888773
No 183
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.71 E-value=8.8e-08 Score=90.17 Aligned_cols=98 Identities=16% Similarity=0.172 Sum_probs=80.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. + ...++.+.+
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~l 222 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R---EDPAIGEAV 222 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T---SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C---CCHHHHHHH
Confidence 679999999999999999999999999999876321 1 124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|++++++++|.++..++ +.+.+.++ + .++.+|.||+|+|.+|+..
T Consensus 223 ~~~l~~~Gv~i~~~~~v~~i~~~~--~~~~v~~~-~-----~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 223 TAAFRAEGIEVLEHTQASQVAHMD--GEFVLTTT-H-----GELRADKLLVATGRTPNTR 274 (467)
T ss_dssp HHHHHHTTCEEETTCCEEEEEEET--TEEEEEET-T-----EEEEESEEEECSCEEESCT
T ss_pred HHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEC-C-----cEEEcCEEEECCCCCcCCC
Confidence 888888899999999999998764 45556654 2 5799999999999997754
No 184
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.71 E-value=6.3e-08 Score=91.24 Aligned_cols=106 Identities=13% Similarity=0.173 Sum_probs=81.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.+
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~--~~~~~~~~~l 224 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIV-------------------------------P--TMDAEIRKQF 224 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc-------------------------------c--cccHHHHHHH
Confidence 689999999999999999999999999999886321 0 0124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.|++++++++|.++..++ +...+.+.+...++...+.+|.||+|+|..|+...
T Consensus 225 ~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 225 QRSLEKQGMKFKLKTKVVGVDTSG--DGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFTSG 283 (470)
T ss_dssp HHHHHHSSCCEECSEEEEEEECSS--SSEEEEEEESSSCCCEEEEESEEECCCCEEECCTT
T ss_pred HHHHHHcCCEEEeCCEEEEEEEcC--CeEEEEEEecCCCcceEEECCEEEECCCCCcCCCC
Confidence 888888999999999999998654 33556655311122367999999999999977543
No 185
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.71 E-value=5.6e-09 Score=91.55 Aligned_cols=192 Identities=15% Similarity=0.149 Sum_probs=104.6
Q ss_pred CeEEEEcCCCCHHHHHHHHhhC-CCeeEEEEecCcceechhhHHHHHHHHhhC-cHHHHHHHHHHHhhhhhcCccccCCC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSC-GACTSIVVRGPVHVLTREIVFAGMLLLKFL-PCKLVDFIVVMLSKMKFGNLFKYGLE 247 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~-g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (381)
.+++|||+|++|+.+|..|++. |.+|+++.+.+ .+....... ...+...+ .....+. +...++.
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~-~~gg~~~~~-~~~~~~~~~~~~~~~~------------l~~~G~~ 105 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV-SPGGGAWLG-GQLFSAMIVRKPAHLF------------LDEIGVA 105 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS-SCCTTTTCC-STTCCCEEEETTTHHH------------HHHHTCC
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC-CCCCceecC-CcchHHHHcCcHHHHH------------HHHcCCC
Confidence 4799999999999999999997 99999999986 221100000 00000000 0000000 0111222
Q ss_pred CCCCCCcccccccCCCccccchhhhhhcC-CCeEEccC--cceEeC--C---eEEEc---------CC-----cEeeccE
Q 035902 248 RPKKGPFYFKAITGQTPTIDVGAMDKIRK-GEIQVFPS--ITSINR--N---EVEFE---------NG-----KIEEFEA 305 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~v~~--~---~v~~~---------~g-----~~~~~D~ 305 (381)
....+.+.. ......+...+.+.+.+ .+++++.+ ++++.. + ++.+. ++ .++++|.
T Consensus 106 ~~~~~~~~~---~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~ 182 (284)
T 1rp0_A 106 YDEQDTYVV---VKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKI 182 (284)
T ss_dssp CEECSSEEE---ESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEE
T ss_pred cccCCCEEE---ecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCE
Confidence 111111100 00111122234445544 68999887 777753 3 33442 22 5789999
Q ss_pred EEEecCCCCCcchhccccC-------CcccccCCCCCCCC------CCCCCCCCcEEEEeccccc--------cc--Ccc
Q 035902 306 IIFATGYKSTVRNWLKRAD-------KDFFDEYGMPKRNC------PNHWKGENGLYCAGFSRTG--------LH--GIS 362 (381)
Q Consensus 306 vi~a~G~~p~~~~~~~~~~-------~~~~~~~g~~~~~~------~~~~~~~~~ifa~Gd~~~~--------~~--~a~ 362 (381)
+|.|+|..+....+.. .. .++....| +.++. ....+..|++|++|++... +. .+.
T Consensus 183 VV~AtG~~s~~~~~~~-~~~~~~g~~~~v~~~~g-~~~~~~~~~~v~~~~~~~p~i~a~G~~~~~~~g~~~~gp~~~~~~ 260 (284)
T 1rp0_A 183 VVSSCGHDGPFGATGV-KRLKSIGMIDHVPGMKA-LDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM 260 (284)
T ss_dssp EEECCCSSSTTTTHHH-HHHHHTTSSSCCCCCEE-ECHHHHHHHHHHHCEEEETTEEECTHHHHHHHTCEECCSCCHHHH
T ss_pred EEECCCCchHHHHHHH-HHhhhccCCCCcCCcCC-chhhhhhHHHhhccccccCCEEEEeeehhhhcCCCCcChHHHHHH
Confidence 9999999888754432 10 11111122 11110 0122456999999998532 11 677
Q ss_pred HHHHHHHHHhhhccccCC
Q 035902 363 IDAKNIANDINLALTDHQ 380 (381)
Q Consensus 363 ~~a~~~a~~i~~~l~~~~ 380 (381)
.+|+.+|.+|.+.|++.+
T Consensus 261 ~sG~~~a~~i~~~l~~~~ 278 (284)
T 1rp0_A 261 ISGQKAGQLALKALGLPN 278 (284)
T ss_dssp HHHHHHHHHHHHHTTCCC
T ss_pred HhHHHHHHHHHHHhhhhh
Confidence 899999999999997764
No 186
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.70 E-value=6.9e-08 Score=89.08 Aligned_cols=101 Identities=19% Similarity=0.178 Sum_probs=81.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||+|+.|+.+|..+.+.|.+|+++++.+.+. + .....++.+.+
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~-------------------------------~-~~~~~~~~~~l 190 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVM-------------------------------A-RVVTPEISSYF 190 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-------------------------------T-TTSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcch-------------------------------h-hccCHHHHHHH
Confidence 679999999999999999999999999999876321 0 01124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+++.|+++++++.|.++..++ .+...|.+.++ +.+.+|.||+|+|..|+.
T Consensus 191 ~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~~~dG-----~~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 191 HDRHSGAGIRMHYGVRATEIAAEG-DRVTGVVLSDG-----NTLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp HHHHHHTTCEEECSCCEEEEEEET-TEEEEEEETTS-----CEEECSEEEECCCEEECC
T ss_pred HHHHHhCCcEEEECCEEEEEEecC-CcEEEEEeCCC-----CEEEcCEEEECcCCccCH
Confidence 888889999999999999998764 23334677766 679999999999998765
No 187
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.70 E-value=1.3e-07 Score=88.98 Aligned_cols=103 Identities=18% Similarity=0.219 Sum_probs=81.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+|+++.+.+. +. ...++.+.+
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 218 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------------------------------PN--EDADVSKEI 218 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999886321 10 124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEe-ecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAK-NTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.|+++++++++.++..++ +...+.+. ++ +...+.+|.||+|+|..|+...
T Consensus 219 ~~~l~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~g---~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 219 EKQFKKLGVTILTATKVESIADGG--SQVTVTVTKDG---VAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp HHHHHHHTCEEECSCEEEEEEECS--SCEEEEEESSS---CEEEEEESEEEECSCEEECCSS
T ss_pred HHHHHHcCCEEEeCcEEEEEEEcC--CeEEEEEEcCC---ceEEEEcCEEEECCCCCccCCC
Confidence 888888899999999999998754 33445554 32 2357999999999999987653
No 188
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.69 E-value=9.3e-08 Score=90.99 Aligned_cols=101 Identities=16% Similarity=0.117 Sum_probs=82.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.+++|||||+.|+..|..+++.|.+|+|+++...++ . ...++.+.+
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~--------------------------------~--~D~ei~~~l 269 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR--------------------------------G--FDQQCAVKV 269 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST--------------------------------T--SCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc--------------------------------c--cchhHHHHH
Confidence 689999999999999999999999999998764221 0 125788888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEV 145 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~ 145 (381)
++.+++.++.++++..+..+...+ +...+.+.++ ..+.+|.|++|+|..|+...+
T Consensus 270 ~~~l~~~gi~~~~~~~v~~~~~~~--~~~~v~~~~~-----~~~~~D~vLvAvGR~Pnt~~L 324 (542)
T 4b1b_A 270 KLYMEEQGVMFKNGILPKKLTKMD--DKILVEFSDK-----TSELYDTVLYAIGRKGDIDGL 324 (542)
T ss_dssp HHHHHHTTCEEEETCCEEEEEEET--TEEEEEETTS-----CEEEESEEEECSCEEESCGGG
T ss_pred HHHHHhhcceeecceEEEEEEecC--CeEEEEEcCC-----CeEEEEEEEEcccccCCcccc
Confidence 888999999999999999998876 5555666655 567899999999999887543
No 189
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.69 E-value=7.1e-08 Score=89.10 Aligned_cols=96 Identities=22% Similarity=0.347 Sum_probs=78.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. . ....++.+.+
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~~l 193 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS-------------------------------R-AAPATLADFV 193 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T-TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-------------------------------c-ccCHHHHHHH
Confidence 6899999999999999999999999999999863210 0 0124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+++.|+++++++.|.++. + + .|.+.++ +.+.+|.||+|+|..|+.
T Consensus 194 ~~~l~~~GV~i~~~~~v~~i~--~--~--~v~~~~g-----~~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 194 ARYHAAQGVDLRFERSVTGSV--D--G--VVLLDDG-----TRIAADMVVVGIGVLAND 241 (408)
T ss_dssp HHHHHHTTCEEEESCCEEEEE--T--T--EEEETTS-----CEEECSEEEECSCEEECC
T ss_pred HHHHHHcCcEEEeCCEEEEEE--C--C--EEEECCC-----CEEEcCEEEECcCCCccH
Confidence 888888999999999999987 3 3 3777665 579999999999999764
No 190
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.68 E-value=9.5e-08 Score=88.89 Aligned_cols=101 Identities=15% Similarity=0.194 Sum_probs=79.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. +. ....++.+.+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~l 197 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVL-------------------------------ER-VTAPPVSAFY 197 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTT-------------------------------TT-TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccc-------------------------------cc-hhhHHHHHHH
Confidence 689999999999999999999999999999876321 00 0124677778
Q ss_pred HHHHHHhCCccccccEEEEEEE--eCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASY--DENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~--~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+++.|+++++++.+.++.. ++ .+...|.+.++ +.+.+|.||+|+|..|+.
T Consensus 198 ~~~l~~~GV~i~~~~~v~~i~~~~~~-~~v~~v~~~~G-----~~i~~D~Vv~a~G~~p~~ 252 (431)
T 1q1r_A 198 EHLHREAGVDIRTGTQVCGFEMSTDQ-QKVTAVLCEDG-----TRLPADLVIAGIGLIPNC 252 (431)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECTTT-CCEEEEEETTS-----CEEECSEEEECCCEEECC
T ss_pred HHHHHhCCeEEEeCCEEEEEEeccCC-CcEEEEEeCCC-----CEEEcCEEEECCCCCcCc
Confidence 8888888999999999999986 32 23335666665 579999999999998764
No 191
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.68 E-value=2e-07 Score=88.09 Aligned_cols=105 Identities=20% Similarity=0.193 Sum_probs=83.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.+++|||||+.|+.+|..|++.|.+|+++++...+. . ...++.+.+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~--------------------------------~--~d~~~~~~l 233 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR--------------------------------G--FDQQMAELV 233 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST--------------------------------T--SCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc--------------------------------c--cCHHHHHHH
Confidence 579999999999999999999999999998753110 0 124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|+++++++.+.++...+ ++...+.+.++..++...+.+|.||+|+|..|+..
T Consensus 234 ~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 234 AASMEERGIPFLRKTVPLSVEKQD-DGKLLVKYKNVETGEESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECT-TSCEEEEEEETTTCCEEEEEESEEEECSCEEECCG
T ss_pred HHHHHhCCCEEEeCCEEEEEEEcC-CCcEEEEEecCCCCceeEEEcCEEEECcccccCcC
Confidence 888888899999999999998754 24456777776545556899999999999987654
No 192
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.68 E-value=3.9e-07 Score=86.20 Aligned_cols=104 Identities=18% Similarity=0.212 Sum_probs=80.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. ....++.+.+
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~l 221 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN---------------------------------LQDEEMKRYA 221 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT---------------------------------CCCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc---------------------------------cCCHHHHHHH
Confidence 6899999999999999999999999999998864310 0124677777
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++. +++++++.+..+..++ +...+.+.+ ..++...+.+|.||+|+|..|+...
T Consensus 222 ~~~l~~~-V~i~~~~~v~~i~~~~--~~v~v~~~~-~~G~~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 222 EKTFNEE-FYFDAKARVISTIEKE--DAVEVIYFD-KSGQKTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp HHHHHTT-SEEETTCEEEEEEECS--SSEEEEEEC-TTCCEEEEEESEEEECSCCEESCSS
T ss_pred HHHHhhC-cEEEECCEEEEEEEcC--CEEEEEEEe-CCCceEEEECCEEEEeeCCccCCCC
Confidence 7777776 8999999999998765 444465542 1123467999999999999987654
No 193
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.68 E-value=1.6e-07 Score=88.45 Aligned_cols=103 Identities=17% Similarity=0.181 Sum_probs=80.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++.+.+
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~l 221 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCA-------------------------------PT--LDEDVTNAL 221 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccc-------------------------------cc--CCHHHHHHH
Confidence 689999999999999999999999999999886321 10 124677788
Q ss_pred HHHH-HHhCCccccccEEEEEEEeCCCCeEEEEEe--ecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYV-SQMGINPRYHRSVESASYDENAKAWIIVAK--NTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~--~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+ ++.|++++++++|.++..++ +...+.+. ++ +...+.+|.||+|+|..|+...
T Consensus 222 ~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~v~~~~~~g---~~~~i~~D~vv~a~G~~p~~~~ 280 (468)
T 2qae_A 222 VGALAKNEKMKFMTSTKVVGGTNNG--DSVSLEVEGKNG---KRETVTCEALLVSVGRRPFTGG 280 (468)
T ss_dssp HHHHHHHTCCEEECSCEEEEEEECS--SSEEEEEECC------EEEEEESEEEECSCEEECCTT
T ss_pred HHHHhhcCCcEEEeCCEEEEEEEcC--CeEEEEEEcCCC---ceEEEECCEEEECCCcccCCCC
Confidence 8888 88899999999999998754 33556654 32 2357999999999999987643
No 194
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.68 E-value=1.8e-07 Score=87.93 Aligned_cols=132 Identities=15% Similarity=0.095 Sum_probs=77.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCCCCCcCCCCCCCeeeec--CC---cccccCCC--------CCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCSASLWKKRAYDRMKLHL--AK---QFCELPHM--------PFP 67 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~g~~~~~~~~~~~~~~~--~~---~~~~~~~~--------~~~ 67 (381)
.++|+|||||..|+.+|..|++. +.+|+++++...+-. .....+.... +. .+..++.. ...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p----~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKP----ADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCB----CCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcC----ccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 36899999999999999999999 889999998864311 0000000000 00 00000000 000
Q ss_pred CCCCCCCCHHHHHHHH----HHHHH-HhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCC
Q 035902 68 SRTPTFVPRISFINYV----DNYVS-QMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 68 ~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~ 141 (381)
..+. ......+.+.. ++... ..++.+++++.|+++..++ +.+.+.+.+...++...+.+|.||+|||..|.
T Consensus 303 ~~~~-~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~--~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~ 378 (463)
T 3s5w_A 303 TNYS-VVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATA--QGIELALRDAGSGELSVETYDAVILATGYERQ 378 (463)
T ss_dssp GTSS-CBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEET--TEEEEEEEETTTCCEEEEEESEEEECCCEECC
T ss_pred cCCC-cCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecC--CEEEEEEEEcCCCCeEEEECCEEEEeeCCCCC
Confidence 0000 01111111111 11111 1488899999999998865 66888888654555667999999999999987
No 195
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.67 E-value=2.5e-08 Score=92.21 Aligned_cols=100 Identities=18% Similarity=0.225 Sum_probs=80.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .....++.+.+
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~--------------------------------~~~~~~~~~~l 191 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV--------------------------------RVLGRRIGAWL 191 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH--------------------------------HHHCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch--------------------------------hhcCHHHHHHH
Confidence 6899999999999999999999999999998763210 00024677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+++.|+++++++.|.++..++ +...|.+.++ +.+.+|.||+|+|..|+.
T Consensus 192 ~~~l~~~GV~i~~~~~v~~i~~~~--~~~~v~~~dg-----~~i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 192 RGLLTELGVQVELGTGVVGFSGEG--QLEQVMASDG-----RSFVADSALICVGAEPAD 243 (410)
T ss_dssp HHHHHHHTCEEECSCCEEEEECSS--SCCEEEETTS-----CEEECSEEEECSCEEECC
T ss_pred HHHHHHCCCEEEeCCEEEEEeccC--cEEEEEECCC-----CEEEcCEEEEeeCCeecH
Confidence 888888899999999999998654 4345777776 689999999999999765
No 196
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.67 E-value=4.1e-08 Score=92.76 Aligned_cols=104 Identities=13% Similarity=0.039 Sum_probs=80.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+|+++.+.+. + ....++.+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 232 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLM-------------------------------Q--GADRDLVKVW 232 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSS-------------------------------T--TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccc-------------------------------c--ccCHHHHHHH
Confidence 689999999999999999999999999999886321 0 0124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|++++++++|.++..++ +...+.+.+... +.+.+.+|.||+|+|..|+..
T Consensus 233 ~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~~-~g~~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 233 QKQNEYRFDNIMVNTKTVAVEPKE--DGVYVTFEGANA-PKEPQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp HHHHGGGEEEEECSCEEEEEEEET--TEEEEEEESSSC-CSSCEEESCEEECCCEEECGG
T ss_pred HHHHHhcCCEEEECCEEEEEEEcC--CeEEEEEeccCC-CceEEEcCEEEECcCCCcCCC
Confidence 888888899999999999998765 445566665100 014578999999999997753
No 197
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.67 E-value=1.1e-07 Score=90.25 Aligned_cols=101 Identities=12% Similarity=0.171 Sum_probs=81.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..+.+.|.+|+++++.+.+. +. ...++.+.+
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~l 229 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-------------------------------PY--EDADAALVL 229 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-------------------------------CC--SSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999886321 10 124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.|+++++++.|.++..++ +...+.+.++ ..+.+|.||+|+|..|+...
T Consensus 230 ~~~l~~~GV~i~~~~~V~~i~~~~--~~v~v~~~~g-----~~i~aD~Vv~a~G~~p~~~~ 283 (499)
T 1xdi_A 230 EESFAERGVRLFKNARAASVTRTG--AGVLVTMTDG-----RTVEGSHALMTIGSVPNTSG 283 (499)
T ss_dssp HHHHHHTTCEEETTCCEEEEEECS--SSEEEEETTS-----CEEEESEEEECCCEEECCSS
T ss_pred HHHHHHCCCEEEeCCEEEEEEEeC--CEEEEEECCC-----cEEEcCEEEECCCCCcCCCc
Confidence 888888999999999999998754 3445555444 57999999999999987643
No 198
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.66 E-value=1.1e-07 Score=90.80 Aligned_cols=101 Identities=17% Similarity=0.197 Sum_probs=81.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++.+.+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------LI--KDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------TC--CSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------------------------------cc--ccHHHHHHH
Confidence 689999999999999999999999999999886321 10 124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCe---EEEEEeecCCCceE-EEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKA---WIIVAKNTALDAYE-EYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~---~~v~~~~~~~~~~~-~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|++++++++|.++..+++ +. +.|.+.++ + .+.+|.||+|+|..|+..
T Consensus 262 ~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G-----~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 262 LDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNG-----EMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp HHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETTE-----EEEEECSCEEECCCCEECCH
T ss_pred HHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECCC-----cEEEEcCEEEECcCCccCCc
Confidence 8888889999999999999987542 32 55666554 4 799999999999998764
No 199
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.66 E-value=3e-07 Score=86.99 Aligned_cols=106 Identities=10% Similarity=0.001 Sum_probs=82.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.+++|||||+.|+.+|..|++.|.+|+++++...+. . -..++.+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~--------------------------------~--~d~~~~~~l 231 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR--------------------------------G--FDQQMSSLV 231 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST--------------------------------T--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc--------------------------------c--CCHHHHHHH
Confidence 679999999999999999999999999999864111 0 124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.++++++++.+.++...+ ++...+.+.+...++...+.+|.||+|+|..|+...
T Consensus 232 ~~~l~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 232 TEHMESHGTQFLKGCVPSHIKKLP-TNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPETRT 291 (488)
T ss_dssp HHHHHHTTCEEEETEEEEEEEECT-TSCEEEEEEETTTTEEEEEEESEEEECSCEEESCGG
T ss_pred HHHHHHCCCEEEeCCEEEEEEEcC-CCcEEEEEEeCCCCeeEEEECCEEEEcccCCcccCc
Confidence 888888999999999999997743 244557666643334456899999999999977643
No 200
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.66 E-value=8.8e-08 Score=90.63 Aligned_cols=101 Identities=15% Similarity=0.096 Sum_probs=81.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhC---CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNL---SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~---g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
.+++|||||+.|+.+|..|.+. |.+|+++++.+.+. +. -..++.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~ 234 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL-------------------------------RG--FDSELR 234 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS-------------------------------TT--SCHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc-------------------------------cc--cCHHHH
Confidence 6899999999999999999999 99999999986321 00 124677
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
+.+.+.+++.|+++++++.|.++..++ .+...|.+.++ +.+.+|.||+|+|..|+..
T Consensus 235 ~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~~~G-----~~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 235 KQLTEQLRANGINVRTHENPAKVTKNA-DGTRHVVFESG-----AEADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp HHHHHHHHHTTEEEEETCCEEEEEECT-TSCEEEEETTS-----CEEEESEEEECSCEEESCT
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcC-CCEEEEEECCC-----cEEEcCEEEEccCCCcCcc
Confidence 788888888899999999999998754 23456777665 4799999999999998764
No 201
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.66 E-value=2.1e-07 Score=87.82 Aligned_cols=107 Identities=15% Similarity=0.040 Sum_probs=82.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~d~~~~~~~ 234 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-------------------------------R--SFDSMISTNC 234 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------T--TSCHHHHHHH
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-------------------------------c--ccCHHHHHHH
Confidence 689999999999999999999999999999876321 0 0124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCce--EEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAY--EEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~--~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.+++++.++.+.++...++.....+.+.+...++. ..+.+|.||+|+|..|+..
T Consensus 235 ~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 235 TEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp HHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEESCT
T ss_pred HHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccCCC
Confidence 88888899999999999999875422134566655322222 6799999999999997765
No 202
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.66 E-value=1.8e-07 Score=91.24 Aligned_cols=138 Identities=14% Similarity=0.103 Sum_probs=79.3
Q ss_pred cccEEEECCCHHHHHHHHHHH---h-CCCCeEEEecCCCCCC-CcCCCC--CC-Ce--e-----eecCCcc---------
Q 035902 3 EVPVVIVGAGPAGLATSACLN---N-LSVPNIILEREDCSAS-LWKKRA--YD-RM--K-----LHLAKQF--------- 58 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~---~-~g~~v~lie~~~~~g~-~~~~~~--~~-~~--~-----~~~~~~~--------- 58 (381)
++||+|||||+||++||+.|+ + .|.+|+|+|+....++ .+.... .. .+ . .+....+
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 101 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDMM 101 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHhc
Confidence 379999999999999999999 6 8999999999874322 121110 00 00 0 0000000
Q ss_pred ---------------------cccCCCCCCCCCCC--CC--------CHHHHHHHHHHHHHHh-CC-ccccccEEEEEEE
Q 035902 59 ---------------------CELPHMPFPSRTPT--FV--------PRISFINYVDNYVSQM-GI-NPRYHRSVESASY 105 (381)
Q Consensus 59 ---------------------~~~~~~~~~~~~~~--~~--------~~~~~~~~~~~~~~~~-~~-~~~~~~~v~~i~~ 105 (381)
+.....++...... .+ ....+.+.+.+.+++. ++ +++.++.|+++..
T Consensus 102 ~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~ 181 (643)
T 1jnr_A 102 GLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELLK 181 (643)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEEE
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEEE
Confidence 00001111100000 00 1234556666667766 99 8999999999987
Q ss_pred eCC--CCeEEEEEeecCCCceEEEEeCEEEEccCCCC
Q 035902 106 DEN--AKAWIIVAKNTALDAYEEYVARYLVVATGENG 140 (381)
Q Consensus 106 ~~~--~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~ 140 (381)
++. .....|...+...++...+.++.||+|||...
T Consensus 182 ~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 182 DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred cCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 642 02222333222223345799999999999884
No 203
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.65 E-value=1.2e-07 Score=89.39 Aligned_cols=100 Identities=17% Similarity=0.202 Sum_probs=81.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhC-CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNL-SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~-g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
++++|||+|+.|+.+|..|++. |.+|+++++.+.+. +. ....++.+.
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~ 207 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIM-------------------------------PG-FTSKSLSQM 207 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSS-------------------------------TT-TSCHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccc-------------------------------cc-ccCHHHHHH
Confidence 6899999999999999999999 99999999876321 00 012467788
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
+.+.+++.|++++++++|.++..++ +...+.+.++ +++.+|.||+|+|..|+.
T Consensus 208 l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~g-----~~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 208 LRHDLEKNDVVVHTGEKVVRLEGEN--GKVARVITDK-----RTLDADLVILAAGVSPNT 260 (472)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEESS-----CEEECSEEEECSCEEECC
T ss_pred HHHHHHhcCCEEEeCCEEEEEEccC--CeEEEEEeCC-----CEEEcCEEEECCCCCcCH
Confidence 8888888999999999999998754 5555777766 579999999999999764
No 204
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.65 E-value=1e-07 Score=90.32 Aligned_cols=101 Identities=12% Similarity=0.060 Sum_probs=81.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhC---CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNL---SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFI 80 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~---g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
++++|||||+.|+.+|..|++. |.+|+++++.+.+. +. -..++.
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~ 238 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-------------------------------RG--FDETIR 238 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-------------------------------TT--SCHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-------------------------------cc--cCHHHH
Confidence 6799999999999999999999 99999999876321 00 124677
Q ss_pred HHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 81 NYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
+.+.+.+++.|+++++++.|.++..++ ++...|.+.++ +.+.+|.||+|+|..|+..
T Consensus 239 ~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~~~~G-----~~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 239 EEVTKQLTANGIEIMTNENPAKVSLNT-DGSKHVTFESG-----KTLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp HHHHHHHHHTTCEEEESCCEEEEEECT-TSCEEEEETTS-----CEEEESEEEECSCEEECCG
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcC-CceEEEEECCC-----cEEEcCEEEECCCCccccc
Confidence 788888888899999999999998754 23355777665 4799999999999997764
No 205
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.64 E-value=5e-08 Score=95.03 Aligned_cols=65 Identities=17% Similarity=0.012 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHHHHh--CCccccccEEEEEEEeCC--CCeEEEEEeecCCCceEEEEeCEEEEccCCCC
Q 035902 76 RISFINYVDNYVSQM--GINPRYHRSVESASYDEN--AKAWIIVAKNTALDAYEEYVARYLVVATGENG 140 (381)
Q Consensus 76 ~~~~~~~~~~~~~~~--~~~~~~~~~v~~i~~~~~--~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~ 140 (381)
...+...+.+.+++. +++++.++.++++..+++ .....+...+...++...+.++.||+|||...
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 345666677777776 899999999988877652 12222433332233456799999999999874
No 206
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.64 E-value=7.9e-08 Score=90.77 Aligned_cols=100 Identities=18% Similarity=0.236 Sum_probs=78.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. ....++.+.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 232 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT---------------------------------IYDGDMAEY 232 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS---------------------------------SSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh---------------------------------cCCHHHHHH
Confidence 36899999999999999999999999999998763210 012467778
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
+.+.+++.|+++++++.|.++..++ +.+.+.++ + .++.+|.||+|+|..|+.+
T Consensus 233 l~~~l~~~Gv~i~~~~~v~~i~~~~--~v~~v~~~-~-----~~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 233 IYKEADKHHIEILTNENVKAFKGNE--RVEAVETD-K-----GTYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESS--BEEEEEET-T-----EEEECSEEEECSCEEESCG
T ss_pred HHHHHHHcCcEEEcCCEEEEEEcCC--cEEEEEEC-C-----CEEEcCEEEECcCCCcChH
Confidence 8888888999999999999997642 33334443 2 4799999999999997654
No 207
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.64 E-value=4.1e-08 Score=89.28 Aligned_cols=93 Identities=14% Similarity=0.180 Sum_probs=76.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. + -..++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-------------------------------G---LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-------------------------------T---CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-------------------------------c---CCHHHHHHH
Confidence 679999999999999999999999999999876321 1 124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+++.|++++++++|.+++ . .. +.+.++ + +.+|.||+|+|..|+.
T Consensus 190 ~~~l~~~gV~i~~~~~v~~i~--~--~~--v~~~~g-----~-i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 190 KDMLEETGVKFFLNSELLEAN--E--EG--VLTNSG-----F-IEGKVKICAIGIVPNV 236 (367)
T ss_dssp HHHHHHTTEEEECSCCEEEEC--S--SE--EEETTE-----E-EECSCEEEECCEEECC
T ss_pred HHHHHHCCCEEEcCCEEEEEE--e--eE--EEECCC-----E-EEcCEEEECcCCCcCH
Confidence 888888899999999998886 2 23 666654 5 9999999999999775
No 208
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.64 E-value=2.6e-07 Score=86.52 Aligned_cols=102 Identities=13% Similarity=0.185 Sum_probs=80.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||+|+.|+.+|..|++.|.+|+++++.+.+. +. .-..++.+.+
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~d~~~~~~l 195 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLL-------------------------------PK-YFDKEMVAEV 195 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT-TCCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccc-------------------------------cc-cCCHHHHHHH
Confidence 679999999999999999999999999999886321 00 0124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEV 145 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~ 145 (381)
.+.+++.|+++++++.|.++...+ +...|.+++ .++.+|.||+|+|..|+...+
T Consensus 196 ~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~------g~i~aD~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 196 QKSLEKQAVIFHFEETVLGIEETA--NGIVLETSE------QEISCDSGIFALNLHPQLAYL 249 (452)
T ss_dssp HHHHHTTTEEEEETCCEEEEEECS--SCEEEEESS------CEEEESEEEECSCCBCCCSSC
T ss_pred HHHHHHcCCEEEeCCEEEEEEccC--CeEEEEECC------CEEEeCEEEECcCCCCChHHH
Confidence 888888899999999999998654 444455543 269999999999999876543
No 209
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.63 E-value=1.9e-07 Score=88.09 Aligned_cols=102 Identities=16% Similarity=0.174 Sum_probs=79.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++.+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~l 232 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-------------------------------RK--FDECIQNTI 232 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999876321 10 124677778
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+++.|++++++++|.++..+++.....+.+.++ + +.+.+|.||+|+|..|+.
T Consensus 233 ~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G---~-~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 233 TDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDS---K-SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp HHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTS---C-EEEEESEEEECSCEEECC
T ss_pred HHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCC---c-EEEEcCEEEECCCCCCcc
Confidence 888888899999999999998754221345666543 1 579999999999999876
No 210
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.63 E-value=6e-09 Score=95.49 Aligned_cols=119 Identities=18% Similarity=0.167 Sum_probs=74.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCCCC---CCC--cCCCCCC----------C-ee----eecCCccccc
Q 035902 4 VPVVIVGAGPAGLATSACLNNL--SVPNIILEREDCS---ASL--WKKRAYD----------R-MK----LHLAKQFCEL 61 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~~~---g~~--~~~~~~~----------~-~~----~~~~~~~~~~ 61 (381)
+||+|||||++|+++|+.|++. |.+|+|+|+.+.. |.. +...... . +. ......+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 4799999999999999999999 9999999998765 221 0000000 0 00 000000000
Q ss_pred CCCCCCC--CCC-CCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCC
Q 035902 62 PHMPFPS--RTP-TFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGE 138 (381)
Q Consensus 62 ~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~ 138 (381)
....... ..+ ....+.++.+.+.+.+++.+++++++++|+++... ..+++|.||.|+|.
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~------------------~~~~ad~vV~AdG~ 141 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL------------------PLADYDLVVLANGV 141 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC------------------CGGGCSEEEECCGG
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc------------------ccccCCEEEECCCC
Confidence 0000000 001 13457889999999998889999999888655321 12568999999999
Q ss_pred CCC
Q 035902 139 NGL 141 (381)
Q Consensus 139 ~~~ 141 (381)
.+.
T Consensus 142 ~S~ 144 (381)
T 3c4a_A 142 NHK 144 (381)
T ss_dssp GGG
T ss_pred Cch
Confidence 865
No 211
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.63 E-value=2.1e-07 Score=82.83 Aligned_cols=104 Identities=19% Similarity=0.204 Sum_probs=78.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.+|+|||+|+.|+.+|..|++.|.+|+++++.+.+. ....+.+.+
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~~~l 190 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-----------------------------------AEKILIKRL 190 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------CCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-----------------------------------cCHHHHHHH
Confidence 679999999999999999999999999999875221 123555666
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCC-CceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTAL-DAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~-~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.++++++++++.++..++ ++...|.+.+... ++...+.+|.||+|+|..|...
T Consensus 191 ~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 250 (320)
T 1trb_A 191 MDKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTA 250 (320)
T ss_dssp HHHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCG
T ss_pred HHhcccCCeEEEcCceeEEEEcCC-CceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChH
Confidence 667777899999999999998654 2333366654221 2336799999999999987654
No 212
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.62 E-value=1.6e-07 Score=87.94 Aligned_cols=100 Identities=12% Similarity=0.114 Sum_probs=78.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. +. ....++.+.+
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~l 197 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVL-------------------------------YK-YFDKEFTDIL 197 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHHH
T ss_pred CeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchh-------------------------------hh-hhhhhHHHHH
Confidence 679999999999999999999999999999876321 00 0124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEE-EEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWI-IVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|++++++++|.++..++ +... +.+ ++ .++.+|.||+|+|..|+..
T Consensus 198 ~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~-~g-----~~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 198 AKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTL-DG-----KEIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp HHHHHHTTCEEEESSCEEEEEEET--TEEEEEET-TS-----CEEEESEEEECCCEEECCG
T ss_pred HHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEe-CC-----CEEECCEEEECcCCCCCHH
Confidence 888888999999999999998643 4332 332 33 5799999999999997754
No 213
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.62 E-value=1.7e-07 Score=88.51 Aligned_cols=101 Identities=22% Similarity=0.302 Sum_probs=82.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||+|+.|+.+|..+++.|.+|+++++.+.+. +. ...++.+.+
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~~--~~~~~~~~l 238 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-------------------------------RN--FDYDLRQLL 238 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-------------------------------cc--cCHHHHHHH
Confidence 679999999999999999999999999999876321 00 124677778
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.|+++++++.|.++..++ +.+.+.+.++ +.+.+|.||+|+|..|....
T Consensus 239 ~~~l~~~Gv~i~~~~~V~~i~~~~--~~v~v~~~~g-----~~i~aD~Vi~A~G~~p~~~~ 292 (484)
T 3o0h_A 239 NDAMVAKGISIIYEATVSQVQSTE--NCYNVVLTNG-----QTICADRVMLATGRVPNTTG 292 (484)
T ss_dssp HHHHHHHTCEEESSCCEEEEEECS--SSEEEEETTS-----CEEEESEEEECCCEEECCTT
T ss_pred HHHHHHCCCEEEeCCEEEEEEeeC--CEEEEEECCC-----cEEEcCEEEEeeCCCcCCCC
Confidence 888888899999999999998765 4456777765 57999999999999977654
No 214
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.61 E-value=2.8e-07 Score=86.99 Aligned_cols=103 Identities=17% Similarity=0.187 Sum_probs=81.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||+|+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.+
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 227 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-------------------------------P--AVDEQVAKEA 227 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------T--TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-------------------------------c--ccCHHHHHHH
Confidence 679999999999999999999999999999876321 1 0124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|+++++++.+.++..++ +...+.+.++. +...+.+|.||+|+|..|+..
T Consensus 228 ~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~v~~~~~~--g~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 228 QKILTKQGLKILLGARVTGTEVKN--KQVTVKFVDAE--GEKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp HHHHHHTTEEEEETCEEEEEEECS--SCEEEEEESSS--EEEEEEESEEEECSCEEECCT
T ss_pred HHHHHhCCCEEEECCEEEEEEEcC--CEEEEEEEeCC--CcEEEECCEEEEeeCCcccCC
Confidence 888888899999999999998765 44556666432 135799999999999997764
No 215
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.61 E-value=1.3e-07 Score=89.52 Aligned_cols=100 Identities=16% Similarity=0.251 Sum_probs=77.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +. ....++.+.+
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~-~~~~~~~~~l 242 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCL-------------------------------AG-YYDRDLTDLM 242 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTT-------------------------------TT-TSCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchh-------------------------------hh-HHHHHHHHHH
Confidence 689999999999999999999999999999886321 00 0124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|++++++++|.++..++ +...+.+ ++ .++.+|.||+|+|..|+.+
T Consensus 243 ~~~l~~~GV~i~~~~~v~~i~~~~--~v~~v~~-~g-----~~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 243 AKNMEEHGIQLAFGETVKEVAGNG--KVEKIIT-DK-----NEYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp HHHHHTTTCEEEETCCEEEEECSS--SCCEEEE-SS-----CEEECSEEEECCCEEECCG
T ss_pred HHHHHhCCeEEEeCCEEEEEEcCC--cEEEEEE-CC-----cEEECCEEEECCCCCcChH
Confidence 888888899999999999997532 2222444 33 5799999999999997754
No 216
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.59 E-value=3.1e-07 Score=82.39 Aligned_cols=103 Identities=11% Similarity=0.033 Sum_probs=78.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|..|+.+|..|++.|.+|+++++.+.+. ......+.+
T Consensus 153 ~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~l 197 (335)
T 2zbw_A 153 KRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKEL 197 (335)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHHH
Confidence 689999999999999999999999999999875221 113455666
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
++.+++.+++++.++.+.++..++ +...|.+.+...++...+.+|.||+|+|..|..+
T Consensus 198 ~~~l~~~gv~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 255 (335)
T 2zbw_A 198 MKAHEEGRLEVLTPYELRRVEGDE--RVRWAVVFHNQTQEELALEVDAVLILAGYITKLG 255 (335)
T ss_dssp HHHHHTTSSEEETTEEEEEEEESS--SEEEEEEEETTTCCEEEEECSEEEECCCEEEECG
T ss_pred HhccccCCeEEecCCcceeEccCC--CeeEEEEEECCCCceEEEecCEEEEeecCCCCch
Confidence 777777899999999999998742 4334666532222346799999999999997653
No 217
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.57 E-value=8.7e-07 Score=84.41 Aligned_cols=107 Identities=15% Similarity=0.099 Sum_probs=79.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.+++|||||+.|+.+|..|++.|.+|+++++...+. . -..++.+.+
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~--------------------------------~--~d~~~~~~~ 256 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR--------------------------------G--FDQDMANKI 256 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST--------------------------------T--SCHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc--------------------------------c--CCHHHHHHH
Confidence 579999999999999999999999999999753110 0 124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCC--CCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDEN--AKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~--~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.|++++.++.+..+....+ .+...+........+...+.+|.||+|+|..|+...
T Consensus 257 ~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 257 GEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp HHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEESCSS
T ss_pred HHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcccCCC
Confidence 8888889999999988888765432 134445544322223356889999999999977653
No 218
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.57 E-value=2.5e-07 Score=89.26 Aligned_cols=102 Identities=19% Similarity=0.253 Sum_probs=80.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. + ....++.+.+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 198 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------T--PVDREMAGFA 198 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-------------------------------T--TSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-------------------------------h--hcCHHHHHHH
Confidence 589999999999999999999999999999876321 1 1124677778
Q ss_pred HHHHHHhCCccccccEEEEEEEeC-----------------CCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDE-----------------NAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~-----------------~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|+++++++.+.++.... ..+...+...++ +.+.+|.||+|+|..|+..
T Consensus 199 ~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-----~~i~~D~vi~a~G~~p~~~ 270 (565)
T 3ntd_A 199 HQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG-----ELLETDLLIMAIGVRPETQ 270 (565)
T ss_dssp HHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS-----CEEEESEEEECSCEEECCH
T ss_pred HHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC-----CEEEcCEEEECcCCccchH
Confidence 888888899999999999998630 124555666554 5799999999999997643
No 219
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.56 E-value=2.6e-07 Score=87.46 Aligned_cols=101 Identities=19% Similarity=0.198 Sum_probs=78.4
Q ss_pred ccEEEECCCHHHHHHHHHHHh----CCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNN----LSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISF 79 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~----~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (381)
++|+|||||+.|+.+|..|++ .|.+|+++++.+... +... ..++
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~-------------------------------~~~l-~~~~ 228 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM-------------------------------GKIL-PEYL 228 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT-------------------------------TTTS-CHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc-------------------------------cccC-CHHH
Confidence 679999999999999999987 478899998765211 0001 1467
Q ss_pred HHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 80 INYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+.+.+++.|+++++++.|.++..++ +...|.+.++ +.+.+|.||+|+|..|+..
T Consensus 229 ~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~~v~l~dG-----~~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 229 SNWTMEKVRREGVKVMPNAIVQSVGVSS--GKLLIKLKDG-----RKVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp HHHHHHHHHTTTCEEECSCCEEEEEEET--TEEEEEETTS-----CEEEESEEEECCCEEECCT
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEecC--CeEEEEECCC-----CEEECCEEEECCCCCccHH
Confidence 7777888888899999999999998654 4445777665 5799999999999997754
No 220
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.56 E-value=1e-07 Score=88.84 Aligned_cols=96 Identities=16% Similarity=0.143 Sum_probs=76.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.+++|||||+.|+.+|..+++.|.+|+|+++.+.+... ...++.+.+
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~---------------------------------~d~~~~~~~ 194 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL---------------------------------MDADMNQPI 194 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT---------------------------------SCGGGGHHH
T ss_pred cEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc---------------------------------ccchhHHHH
Confidence 57999999999999999999999999999988643210 012455667
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.+++++++++|.+++. .. +.+.++ +.+.+|.|++|+|..|+..
T Consensus 195 ~~~l~~~gV~i~~~~~v~~~~~----~~--v~~~~g-----~~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 195 LDELDKREIPYRLNEEINAING----NE--ITFKSG-----KVEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp HHHHHHTTCCEEESCCEEEEET----TE--EEETTS-----CEEECSEEEECCCEEESCG
T ss_pred HHHhhccceEEEeccEEEEecC----Ce--eeecCC-----eEEeeeeEEEEeceecCcH
Confidence 7778888999999999988753 22 777776 6799999999999987654
No 221
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.54 E-value=3.7e-07 Score=85.78 Aligned_cols=101 Identities=17% Similarity=0.164 Sum_probs=80.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||+|+.|+.+|..+++.|.+|+++++.+.+. +. ...++.+.+
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-------------------------------~~--~~~~~~~~l 217 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-------------------------------SR--FDQDMRRGL 217 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHHH
Confidence 679999999999999999999999999999876321 00 124677888
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEE-EeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIV-AKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~-~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
.+.+++.|++++.++.|.++..++ ++...|. +.++ + +.+|.||+|+|..|+...
T Consensus 218 ~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~g-----~-i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 218 HAAMEEKGIRILCEDIIQSVSADA-DGRRVATTMKHG-----E-IVADQVMLALGRMPNTNG 272 (463)
T ss_dssp HHHHHHTTCEEECSCCEEEEEECT-TSCEEEEESSSC-----E-EEESEEEECSCEEESCTT
T ss_pred HHHHHHCCCEEECCCEEEEEEEcC-CCEEEEEEcCCC-----e-EEeCEEEEeeCcccCCCC
Confidence 888888999999999999998764 2334566 5555 5 999999999999977653
No 222
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.52 E-value=3e-07 Score=91.12 Aligned_cols=38 Identities=39% Similarity=0.654 Sum_probs=35.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSAS 40 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~ 40 (381)
.+||+|||||++|+++|+.|++.|.+|+|+|+.+.+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 47999999999999999999999999999999887776
No 223
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.50 E-value=8e-08 Score=91.31 Aligned_cols=38 Identities=32% Similarity=0.550 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSAS 40 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~ 40 (381)
=++|+|||||++||+||+.|+++|++|+|+|+++.+||
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-----
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCC
Confidence 06799999999999999999999999999999999988
No 224
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.49 E-value=1.6e-07 Score=87.31 Aligned_cols=103 Identities=25% Similarity=0.327 Sum_probs=71.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCC--CeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCG--ACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLE 247 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g--~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (381)
|+|+|||+|+.|+.+|..|.+++ .+|+++.+++.+........ .+...+ ....
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~---v~~g~~--------------------~~~~-- 57 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPH---LAMGWR--------------------KFED-- 57 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHH---HHHTCS--------------------CGGG--
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHH---HhcCCC--------------------CHHH--
Confidence 78999999999999999999876 58999999884322111110 000100 0000
Q ss_pred CCCCCCcccccccCCCccccchhhhhhcCCCeEEccC-cceEeCC--eEEEcCCcEeeccEEEEecCCCCC
Q 035902 248 RPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS-ITSINRN--EVEFENGKIEEFEAIIFATGYKST 315 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~v~~~--~v~~~~g~~~~~D~vi~a~G~~p~ 315 (381)
+...+.+.+++.+++++.+ ++.++.+ .|.+++|+++++|.+|+|||.++.
T Consensus 58 ------------------i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 58 ------------------ISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp ------------------SEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred ------------------hhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 0111234456678999998 9999865 689999999999999999998754
No 225
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.48 E-value=3.6e-07 Score=88.57 Aligned_cols=97 Identities=13% Similarity=0.209 Sum_probs=79.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. +. ...++.+.+
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 234 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM-------------------------------PP--IDYEMAAYV 234 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------------------------cc--CCHHHHHHH
Confidence 679999999999999999999999999999876321 11 124677788
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+++.|+++++++.|.++..+. +. |.+.++ +.+.+|.||+|+|..|+.
T Consensus 235 ~~~l~~~GV~i~~~~~v~~i~~~~--~~--v~~~~g-----~~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 235 HEHMKNHDVELVFEDGVDALEENG--AV--VRLKSG-----SVIQTDMLILAIGVQPES 284 (588)
T ss_dssp HHHHHHTTCEEECSCCEEEEEGGG--TE--EEETTS-----CEEECSEEEECSCEEECC
T ss_pred HHHHHHcCCEEEECCeEEEEecCC--CE--EEECCC-----CEEEcCEEEEccCCCCCh
Confidence 888888999999999999997654 33 666665 579999999999998765
No 226
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.45 E-value=1.7e-07 Score=89.35 Aligned_cols=39 Identities=31% Similarity=0.602 Sum_probs=36.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhC-CCCeEEEecCCCCCCCc
Q 035902 4 VPVVIVGAGPAGLATSACLNNL-SVPNIILEREDCSASLW 42 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~-g~~v~lie~~~~~g~~~ 42 (381)
+||+|||||++|++||+.|+++ |.+|+|+|+++.+||.-
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~ 50 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLA 50 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGG
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCe
Confidence 7999999999999999999985 99999999999999953
No 227
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.42 E-value=7.2e-07 Score=81.04 Aligned_cols=106 Identities=13% Similarity=0.138 Sum_probs=74.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+... .+ + +.......+.+.+
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~---------------------~~----d-~~~~~~~~~~~~l 220 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP---------------------DA----D-PSVRLSPYTRQRL 220 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHHH
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC---------------------CC----C-CCccCCHHHHHHH
Confidence 58999999999999999999999999999987632100 00 0 0111123556677
Q ss_pred HHHHHHhC-CccccccEEEEEEEeCCCCeEEEEEeecCCCceEEE-EeCEEEEccCCCCCC
Q 035902 84 DNYVSQMG-INPRYHRSVESASYDENAKAWIIVAKNTALDAYEEY-VARYLVVATGENGLI 142 (381)
Q Consensus 84 ~~~~~~~~-~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~-~~d~vIlAtG~~~~~ 142 (381)
.+.+++.+ ++++.++.|..+..++ +.+.+.+.++ +.+ .+|.||+|+|..|..
T Consensus 221 ~~~l~~~g~v~~~~~~~v~~i~~~~--~~~~v~~~~g-----~~~~~~d~vi~a~G~~~~~ 274 (369)
T 3d1c_A 221 GNVIKQGARIEMNVHYTVKDIDFNN--GQYHISFDSG-----QSVHTPHEPILATGFDATK 274 (369)
T ss_dssp HHHHHTTCCEEEECSCCEEEEEEET--TEEEEEESSS-----CCEEESSCCEECCCBCGGG
T ss_pred HHHHhhCCcEEEecCcEEEEEEecC--CceEEEecCC-----eEeccCCceEEeeccCCcc
Confidence 77777776 9999999999987654 4556777665 334 469999999999765
No 228
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.42 E-value=1.4e-06 Score=79.02 Aligned_cols=103 Identities=16% Similarity=0.057 Sum_probs=75.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.+|+|||+|+.|+.+|..|++.+.+|+++++.+.+. ....+.+.+
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~~~~l 208 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-----------------------------------GHGKTAHEV 208 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-----------------------------------SCSHHHHSS
T ss_pred CcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-----------------------------------CCHHHHHHH
Confidence 579999999999999999999999999999876321 001344555
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+..++.++++++++++.++..++ ++...|.+.. ..++...+.+|.||+|+|..|...
T Consensus 209 ~~~~~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~-~~g~~~~i~~D~vi~a~G~~p~~~ 266 (360)
T 3ab1_A 209 ERARANGTIDVYLETEVASIEESN-GVLTRVHLRS-SDGSKWTVEADRLLILIGFKSNLG 266 (360)
T ss_dssp HHHHHHTSEEEESSEEEEEEEEET-TEEEEEEEEE-TTCCEEEEECSEEEECCCBCCSCG
T ss_pred HHHhhcCceEEEcCcCHHHhccCC-CceEEEEEEe-cCCCeEEEeCCEEEECCCCCCCHH
Confidence 666677789999999999998764 1212355541 122346799999999999887653
No 229
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.41 E-value=2.9e-06 Score=82.37 Aligned_cols=39 Identities=26% Similarity=0.380 Sum_probs=36.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL 41 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~ 41 (381)
++||+|||||++|+++|+.|++.|++|+|||+....++.
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~ 84 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGL 84 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCc
Confidence 589999999999999999999999999999998877753
No 230
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.40 E-value=9.5e-07 Score=78.83 Aligned_cols=100 Identities=13% Similarity=0.121 Sum_probs=72.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. ..+ .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~-~~~---~ 194 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR----------------------------------AN-KVA---Q 194 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----------------------------------SC-HHH---H
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC----------------------------------cc-hHH---H
Confidence 579999999999999999999999999999875221 00 122 2
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
+.+.++.++++++++++.++..++ +...|.+.+...++...+.+|.||+|+|..|+..
T Consensus 195 ~~l~~~~gv~i~~~~~v~~i~~~~--~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 252 (325)
T 2q7v_A 195 ARAFANPKMKFIWDTAVEEIQGAD--SVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTA 252 (325)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESS--SEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred HHHHhcCCceEecCCceEEEccCC--cEEEEEEEECCCCcEEEEEcCEEEEccCCCCChH
Confidence 223334589999999999998643 3334666542223345799999999999987654
No 231
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.40 E-value=1.2e-06 Score=78.50 Aligned_cols=100 Identities=17% Similarity=0.174 Sum_probs=74.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||+|+.|+.+|..|.+.+.+|+++++...+. .. ..+
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-----------------------------------~~----~~~ 214 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-----------------------------------AS----TIM 214 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SC----HHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC-----------------------------------CC----HHH
Confidence 679999999999999999999999999999876321 01 122
Q ss_pred HHHH-HHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYV-SQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~-~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+ ++.+++++.++.+.++..++ .+...|.+.+...++...+.+|.||+|+|..|...
T Consensus 215 ~~~l~~~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 274 (338)
T 3itj_A 215 QKRAEKNEKIEILYNTVALEAKGDG-KLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATK 274 (338)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEESS-SSEEEEEEEETTTTEEEEEECSEEEECSCEEECCG
T ss_pred HHHHHhcCCeEEeecceeEEEEccc-CcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChh
Confidence 2333 33499999999999998765 23334777764334457899999999999987654
No 232
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.39 E-value=2.1e-06 Score=75.90 Aligned_cols=100 Identities=11% Similarity=0.083 Sum_probs=73.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. .. ..+
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~----~~~ 185 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------AD----QVL 185 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----------------------------------SC----HHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----------------------------------cc----HHH
Confidence 679999999999999999999999999999876220 00 122
Q ss_pred HHHHHH-hCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQ-MGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~-~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+.+ .++++++++++.++..++ .....+.+.++..++...+.+|.||+|+|..|+..
T Consensus 186 ~~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 245 (310)
T 1fl2_A 186 QDKLRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTN 245 (310)
T ss_dssp HHHHHTCTTEEEESSEEEEEEEESS-SSEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred HHHHhhCCCeEEecCCceEEEEcCC-CcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCch
Confidence 333444 589999999999998653 22224666664334456799999999999987653
No 233
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.38 E-value=4.5e-07 Score=84.18 Aligned_cols=41 Identities=37% Similarity=0.542 Sum_probs=37.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC-CCeEEEecCCCCCCCcC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLS-VPNIILEREDCSASLWK 43 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g-~~v~lie~~~~~g~~~~ 43 (381)
++||+|||||++|++||+.|++.| .+|+|+|+++.+||...
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~ 47 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCH 47 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCccc
Confidence 589999999999999999999999 89999999999988543
No 234
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.38 E-value=4.5e-07 Score=83.52 Aligned_cols=106 Identities=18% Similarity=0.133 Sum_probs=72.8
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCC--CeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccC
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCG--ACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYG 245 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g--~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 245 (381)
.+|+|+|||+|+.|+.+|..|.+.+ .+|++|.+++.+........+ +.... ....
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v---~~g~~--------------------~~~~ 57 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEV---IGGDR--------------------ELAS 57 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHH---HHTSS--------------------CGGG
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHH---hcCCC--------------------CHHH
Confidence 3799999999999999999998876 489999988732221111100 00000 0000
Q ss_pred CCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC-cceEeCC--eEEEcCCcEeeccEEEEecCCCCCcc
Q 035902 246 LERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS-ITSINRN--EVEFENGKIEEFEAIIFATGYKSTVR 317 (381)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~v~~~--~v~~~~g~~~~~D~vi~a~G~~p~~~ 317 (381)
+ . ...+.+.+.+++++.+ ++.++.+ .+.+.+|+++++|.+|+|||.+++.+
T Consensus 58 ~--------------------~-~~~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~~~ 111 (401)
T 3vrd_B 58 L--------------------R-VGYDGLRAHGIQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLLYD 111 (401)
T ss_dssp G--------------------E-ECSHHHHHTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEECGG
T ss_pred H--------------------h-hCHHHHHHCCCEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccccC
Confidence 0 0 0123345578999988 9999875 68889999999999999999998864
No 235
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.37 E-value=1.1e-06 Score=81.94 Aligned_cols=105 Identities=15% Similarity=0.324 Sum_probs=74.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhh---CCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSS---CGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGL 246 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~---~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (381)
++++|||+|+.|+.+|..|++ .+.+|+++.+.+......... ........
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~---~~~~g~~~------------------------ 57 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNP---WVGVGWKE------------------------ 57 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHH---HHHHTSSC------------------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCcc---ccccCccC------------------------
Confidence 689999999999999999999 788999999988322111100 00000000
Q ss_pred CCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC-cceEeCC--eEEEcCCcEeeccEEEEecCCCCCcc
Q 035902 247 ERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS-ITSINRN--EVEFENGKIEEFEAIIFATGYKSTVR 317 (381)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~v~~~--~v~~~~g~~~~~D~vi~a~G~~p~~~ 317 (381)
...+...+.+.+++.+++++.+ ++.++.+ .+.+++++++.+|.+|+|||.+|+.+
T Consensus 58 ----------------~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 58 ----------------RDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFE 115 (437)
T ss_dssp ----------------HHHHEEECHHHHHTTTCEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEECGG
T ss_pred ----------------HHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcCcc
Confidence 0011112345566778888877 8888875 68888999999999999999998864
No 236
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.35 E-value=1.3e-06 Score=81.74 Aligned_cols=98 Identities=18% Similarity=0.245 Sum_probs=75.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+.. . ....++.+.+
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~-~~~~~~~~~l 196 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR-------------------------------R-SFDKEVTDIL 196 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------T-TSCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch-------------------------------h-hcCHHHHHHH
Confidence 5899999999999999999999999999998863211 0 0124677777
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+++. +++++++.+.++..++ +. .....++ .++.+|.||+|+|..|+.
T Consensus 197 ~~~l~~~-v~i~~~~~v~~i~~~~--~v-~~v~~~g-----~~i~~D~Vv~a~G~~p~~ 246 (449)
T 3kd9_A 197 EEKLKKH-VNLRLQEITMKIEGEE--RV-EKVVTDA-----GEYKAELVILATGIKPNI 246 (449)
T ss_dssp HHHHTTT-SEEEESCCEEEEECSS--SC-CEEEETT-----EEEECSEEEECSCEEECC
T ss_pred HHHHHhC-cEEEeCCeEEEEeccC--cE-EEEEeCC-----CEEECCEEEEeeCCccCH
Confidence 7777777 8999999999887543 22 1223343 679999999999999765
No 237
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.35 E-value=1.7e-06 Score=76.84 Aligned_cols=99 Identities=16% Similarity=0.192 Sum_probs=74.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.+|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ... .++
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~~ 196 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK-----------------------------------AQP---IYV 196 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC-----------------------------------SCH---HHH
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC-----------------------------------cCH---HHH
Confidence 679999999999999999999999999999876321 011 223
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
+++.++.++++++++.+.++..++ +...+.+.+...++...+.+|.||+|+|..|..
T Consensus 197 ~~~~~~~gv~~~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 253 (323)
T 3f8d_A 197 ETVKKKPNVEFVLNSVVKEIKGDK--VVKQVVVENLKTGEIKELNVNGVFIEIGFDPPT 253 (323)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESS--SEEEEEEEETTTCCEEEEECSEEEECCCEECCH
T ss_pred HHHHhCCCcEEEeCCEEEEEeccC--ceeEEEEEECCCCceEEEEcCEEEEEECCCCCh
Confidence 334445589999999999998753 444577776333344579999999999998764
No 238
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.35 E-value=1.5e-06 Score=76.99 Aligned_cols=101 Identities=18% Similarity=0.125 Sum_probs=72.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. ....+.
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~--- 185 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-----------------------------------CAPITL--- 185 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-----------------------------------SCHHHH---
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-----------------------------------CCHHHH---
Confidence 689999999999999999999999999999875221 001222
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
+.+.++.++++++++.+.++..++ ++...+.+.+...++...+.+|.||+|+|..|+.+
T Consensus 186 ~~l~~~~gv~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 244 (311)
T 2q0l_A 186 EHAKNNDKIEFLTPYVVEEIKGDA-SGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNA 244 (311)
T ss_dssp HHHHTCTTEEEETTEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECSCEEECCG
T ss_pred HHHhhCCCeEEEeCCEEEEEECCC-CcEeEEEEEecCCCceEEEecCEEEEEecCccChh
Confidence 222234689999999999998763 12223566532223345799999999999997654
No 239
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.34 E-value=2.9e-06 Score=75.68 Aligned_cols=99 Identities=16% Similarity=0.062 Sum_probs=75.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.+++|||+|+.|+.+|..|++.+.+|+++++.+.+. .....
T Consensus 155 ~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~-----------------------------------~~~~~---- 195 (332)
T 3lzw_A 155 RRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR-----------------------------------AHEHS---- 195 (332)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS-----------------------------------SCHHH----
T ss_pred CEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC-----------------------------------ccHHH----
Confidence 679999999999999999999999999999875321 00111
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.+++++.++.+.++..++ +...+.+.++..++...+.+|.||+|+|..|..+
T Consensus 196 ~~~l~~~gv~~~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~ 253 (332)
T 3lzw_A 196 VENLHASKVNVLTPFVPAELIGED--KIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLG 253 (332)
T ss_dssp HHHHHHSSCEEETTEEEEEEECSS--SCCEEEEEETTSCCEEEEECSEEEECCCEECCCG
T ss_pred HHHHhcCCeEEEeCceeeEEecCC--ceEEEEEEecCCCceEEEECCEEEEeeccCCCch
Confidence 122466799999999999998755 3344777775445557899999999999988654
No 240
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.34 E-value=2.9e-06 Score=75.44 Aligned_cols=100 Identities=13% Similarity=0.044 Sum_probs=72.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|+.|+.+|..|.+.+.+|+++++.+.+. ....+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~l---- 196 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENAY---- 196 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHHH----
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHHH----
Confidence 579999999999999999999999999999875211 01222
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+.+.++++++++++.++..++ ...-.+.+.+...++...+.+|.||+|+|..|+..
T Consensus 197 ~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 255 (319)
T 3cty_A 197 VQEIKKRNIPYIMNAQVTEIVGDG-KKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTS 255 (319)
T ss_dssp HHHHHHTTCCEECSEEEEEEEESS-SSEEEEEEEETTTCCEEEECCSEEEECCCEEECCG
T ss_pred HHHHhcCCcEEEcCCeEEEEecCC-ceEEEEEEEEcCCCceEEEecCEEEEeeCCccChH
Confidence 333446799999999999998754 11223555532222345799999999999987654
No 241
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.34 E-value=3.3e-07 Score=87.41 Aligned_cols=41 Identities=29% Similarity=0.428 Sum_probs=37.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCC-CCeEEEecCCCCCCCc
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLS-VPNIILEREDCSASLW 42 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g-~~v~lie~~~~~g~~~ 42 (381)
+.+||+|||||++|++||+.|++.| .+|+|+|+++.+||..
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 3589999999999999999999999 9999999999999843
No 242
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.33 E-value=9.6e-07 Score=80.70 Aligned_cols=108 Identities=20% Similarity=0.188 Sum_probs=74.0
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCC
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLE 247 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (381)
...+++|||+|+.|+.+|..|...+.+|+++.+.+.. |.....+...+.... ...
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~--~y~~~~l~~~l~g~~--------------------~~~--- 62 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL--PYYRPRLNEIIAKNK--------------------SID--- 62 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC--CBCGGGHHHHHHSCC--------------------CGG---
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC--CcccChhhHHHcCCC--------------------CHH---
Confidence 4578999999999999999997778899999988732 111111111111110 000
Q ss_pred CCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeCC--eEEEcCCcEeeccEEEEecCCCCCcc
Q 035902 248 RPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN--EVEFENGKIEEFEAIIFATGYKSTVR 317 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~--~v~~~~g~~~~~D~vi~a~G~~p~~~ 317 (381)
.+.....+.+++.+++++.+ |+.++.+ .+.+++|+++.+|.+|+|||.+|..+
T Consensus 63 -----------------~l~~~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~~p 119 (385)
T 3klj_A 63 -----------------DILIKKNDWYEKNNIKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIANKI 119 (385)
T ss_dssp -----------------GTBSSCHHHHHHTTCEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEECCC
T ss_pred -----------------HccCCCHHHHHHCCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcCCC
Confidence 00111244456678998877 8888864 68889999999999999999988764
No 243
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.32 E-value=1.8e-06 Score=81.74 Aligned_cols=99 Identities=19% Similarity=0.267 Sum_probs=73.1
Q ss_pred cEEEECCCHHHHHHHHHHHhC--------------CCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCC
Q 035902 5 PVVIVGAGPAGLATSACLNNL--------------SVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRT 70 (381)
Q Consensus 5 ~vvIIGaG~aG~~~A~~l~~~--------------g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (381)
.++|||||+.|+.+|..|++. ..+|+|+|..+.+-
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------- 267 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------- 267 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-------------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-------------------------------
Confidence 699999999999999988753 35899999887432
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEe--ecCCCceEEEEeCEEEEccCCCCC
Q 035902 71 PTFVPRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAK--NTALDAYEEYVARYLVVATGENGL 141 (381)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~--~~~~~~~~~~~~d~vIlAtG~~~~ 141 (381)
+.+ ..++.+++++.+++.|+++++++.|.+++.+ ...+... ++ ....+++.||.||.|+|..|+
T Consensus 268 ~~~--~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~----~~~~~~~~~dg-~~~~~~i~ad~viwa~Gv~~~ 333 (502)
T 4g6h_A 268 NMF--EKKLSSYAQSHLENTSIKVHLRTAVAKVEEK----QLLAKTKHEDG-KITEETIPYGTLIWATGNKAR 333 (502)
T ss_dssp TTS--CHHHHHHHHHHHHHTTCEEETTEEEEEECSS----EEEEEEECTTS-CEEEEEEECSEEEECCCEECC
T ss_pred cCC--CHHHHHHHHHHHHhcceeeecCceEEEEeCC----ceEEEEEecCc-ccceeeeccCEEEEccCCcCC
Confidence 111 2578888899999999999999999988643 2212222 21 112357999999999998865
No 244
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.32 E-value=4e-07 Score=83.26 Aligned_cols=45 Identities=22% Similarity=0.243 Sum_probs=40.7
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKR 45 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~ 45 (381)
|+++||+|||||++|+++|+.|++.|.+|+|+|+++.+||.+...
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~ 45 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDA 45 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccc
Confidence 777899999999999999999999999999999999999976543
No 245
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.31 E-value=2.1e-06 Score=76.82 Aligned_cols=102 Identities=18% Similarity=0.183 Sum_probs=73.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|..|+.+|..|++.|.+|+++++.+.+. . ...+.
T Consensus 160 ~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~----------------------------------~-~~~~~--- 201 (333)
T 1vdc_A 160 KPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR----------------------------------A-SKIMQ--- 201 (333)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------S-CHHHH---
T ss_pred CeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC----------------------------------c-cHHHH---
Confidence 679999999999999999999999999999876321 0 11111
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCC-CeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENA-KAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~-~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
++..++.++++++++++.++..+++. +...+.+.+...++...+.+|.||+|+|..|...
T Consensus 202 ~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~ 262 (333)
T 1vdc_A 202 QRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATK 262 (333)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred HHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchH
Confidence 23345578999999999999865411 2222566543233446799999999999997654
No 246
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.31 E-value=5.5e-07 Score=84.27 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=39.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK 44 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~ 44 (381)
++||+|||||++|++||..|++.|.+|+|+|+++.+||.+..
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 489999999999999999999999999999999999996544
No 247
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.31 E-value=5.1e-07 Score=85.12 Aligned_cols=41 Identities=27% Similarity=0.311 Sum_probs=38.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCC--CCeEEEecCCCCCCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLS--VPNIILEREDCSASL 41 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g--~~v~lie~~~~~g~~ 41 (381)
|+.+||+|||||++|+++|+.|++.| .+|+|+|+++.+||.
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~ 44 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGK 44 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTT
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCce
Confidence 76799999999999999999999999 999999999888774
No 248
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.29 E-value=5.3e-07 Score=84.44 Aligned_cols=40 Identities=33% Similarity=0.497 Sum_probs=37.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCc
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLW 42 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~ 42 (381)
++||+|||||++|++||+.|++.|.+|+|+|+++.+||..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~ 44 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRT 44 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCce
Confidence 5899999999999999999999999999999999888754
No 249
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.28 E-value=6.1e-07 Score=82.51 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=39.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhC-CCCeEEEecCCCCCCCcCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNL-SVPNIILEREDCSASLWKK 44 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~-g~~v~lie~~~~~g~~~~~ 44 (381)
++||+|||||++|+++|+.|++. |.+|+|+|+++.+||.+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 58999999999999999999999 9999999999999996554
No 250
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.26 E-value=2.8e-06 Score=79.78 Aligned_cols=103 Identities=19% Similarity=0.309 Sum_probs=74.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. +.+ ...++.+.+
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~-~d~~~~~~l 220 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRAL-------------------------------ITL-EDQDIVNTL 220 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TTS-CCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCC-------------------------------CCC-CCHHHHHHH
Confidence 679999999999999999999999999999876321 100 023555555
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
++.++ +++++++.+.++..+++ +...+.+.+ ..++...+.+|.||+|+|..|+..
T Consensus 221 ~~~l~---v~i~~~~~v~~i~~~~~-~~v~v~~~~-~~G~~~~i~~D~vi~a~G~~p~~~ 275 (466)
T 3l8k_A 221 LSILK---LNIKFNSPVTEVKKIKD-DEYEVIYST-KDGSKKSIFTNSVVLAAGRRPVIP 275 (466)
T ss_dssp HHHHC---CCEECSCCEEEEEEEET-TEEEEEECC-TTSCCEEEEESCEEECCCEEECCC
T ss_pred HhcCE---EEEEECCEEEEEEEcCC-CcEEEEEEe-cCCceEEEEcCEEEECcCCCcccc
Confidence 54443 88899999999977531 344466652 012235799999999999997765
No 251
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.26 E-value=2.2e-06 Score=72.47 Aligned_cols=176 Identities=23% Similarity=0.228 Sum_probs=100.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCccee-chhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVL-TREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLER 248 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~-p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (381)
-+++|||+|++|+++|..|++.|.+|+++.+.....- +... . +..+....+.+.+ . .
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~-~----~~~~~~~~~~~~~------------~-d---- 61 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLP-P----KPPFPPGSLLERA------------Y-D---- 61 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSC-C----CSCCCTTCHHHHH------------C-C----
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCc-c----ccccchhhHHhhh------------c-c----
Confidence 4799999999999999999999999999998731110 0000 0 0000000000000 0 0
Q ss_pred CCCCCcccccccCCCccccchhhhhhcCC-CeEEccC-cceEeC--C---eEEEcCCcEeeccEEEEecCCCCCcchhcc
Q 035902 249 PKKGPFYFKAITGQTPTIDVGAMDKIRKG-EIQVFPS-ITSINR--N---EVEFENGKIEEFEAIIFATGYKSTVRNWLK 321 (381)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~-v~~v~~--~---~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~ 321 (381)
..++ .+..+...+.+.+++. +++++.. ++++.. + .+.+.+|+++++|.||+|+|..++....+.
T Consensus 62 -~~g~--------~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~~~G 132 (232)
T 2cul_A 62 -PKDE--------RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARLFLG 132 (232)
T ss_dssp -TTCC--------CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEEEET
T ss_pred -CCCC--------CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhceecC
Confidence 0000 0112233345566665 8888855 777653 2 366778888999999999999665431110
Q ss_pred --------------------ccCCcc-ccc--------CCCCC-------CC------CCCCCCCCCcEEEEeccccccc
Q 035902 322 --------------------RADKDF-FDE--------YGMPK-------RN------CPNHWKGENGLYCAGFSRTGLH 359 (381)
Q Consensus 322 --------------------~~~~~~-~~~--------~g~~~-------~~------~~~~~~~~~~ifa~Gd~~~~~~ 359 (381)
+...++ ++. .|.+. .. .....++.||||++|||+ ...
T Consensus 133 ~~~~~~g~~g~~~~~~l~~~l~~~g~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~t~~p~iya~G~~a-~~g 211 (232)
T 2cul_A 133 GVVEEAGRLSEASYPDLLEDLSRLGFRFVEREGEVPETPSTPGYRVRYLAFHPEEWEEKTFRLKRLEGLYAVGLCV-REG 211 (232)
T ss_dssp TEEESEEETTEECCSHHHHHHHHTTCCEEEEEEEEC-----CCEEEEEEEECGGGEETTTTEETTSBSEEECGGGT-SCC
T ss_pred CccCCCCCCcccchhhhCHHHHhCCCeEEccccccCcCCCCCCccCchhhcccCCCCCccccccccccceeeeecc-cCc
Confidence 000111 110 01100 00 001125889999999999 433
Q ss_pred ---CccHHHHHHHHHhhhccc
Q 035902 360 ---GISIDAKNIANDINLALT 377 (381)
Q Consensus 360 ---~a~~~a~~~a~~i~~~l~ 377 (381)
.+..||+.+|++|...|+
T Consensus 212 ~~~~~~~~g~~~a~~i~~~l~ 232 (232)
T 2cul_A 212 DYARMSEEGKRLAEHLLHELG 232 (232)
T ss_dssp CHHHHHHHHHHHHHHHHHHC-
T ss_pred cHHHHHHHHHHHHHHHHhhcC
Confidence 778999999999988763
No 252
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.26 E-value=1.3e-06 Score=78.38 Aligned_cols=102 Identities=15% Similarity=0.136 Sum_probs=72.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. .. ..+.
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~----------------------------------~~-~~~~--- 197 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR----------------------------------AS-KIML--- 197 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS----------------------------------SC-TTHH---
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC----------------------------------cc-HHHH---
Confidence 689999999999999999999999999999875321 00 0111
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEV 145 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~ 145 (381)
++..++.++++++++.+.++..++ +...+.+.+...++...+.+|.||+|+|..|...-+
T Consensus 198 ~~~~~~~gV~v~~~~~v~~i~~~~--~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~ 257 (335)
T 2a87_A 198 DRARNNDKIRFLTNHTVVAVDGDT--TVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLV 257 (335)
T ss_dssp HHHHHCTTEEEECSEEEEEEECSS--SCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTT
T ss_pred HHHhccCCcEEEeCceeEEEecCC--cEeEEEEEEcCCCceEEeecCEEEEccCCccChhHh
Confidence 223455689999999999987654 222255554222233679999999999999775433
No 253
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.26 E-value=7.5e-07 Score=80.58 Aligned_cols=42 Identities=31% Similarity=0.351 Sum_probs=38.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecC-CCCCCCcCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERE-DCSASLWKK 44 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~-~~~g~~~~~ 44 (381)
.+||+|||||++|+++|+.|.+.|.+|+|+|++ +.+||.+..
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t 86 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT 86 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee
Confidence 479999999999999999999999999999999 999996654
No 254
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.25 E-value=1.1e-06 Score=83.95 Aligned_cols=39 Identities=28% Similarity=0.478 Sum_probs=36.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL 41 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~ 41 (381)
++||+|||||++|++||+.|++.|.+|+|+|+++.+||.
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 489999999999999999999999999999999988874
No 255
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.24 E-value=9.2e-07 Score=80.65 Aligned_cols=42 Identities=24% Similarity=0.214 Sum_probs=39.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK 44 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~ 44 (381)
++||+|||||++|+++|+.|++.|.+|+|+|+++.+||.+..
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 489999999999999999999999999999999999997654
No 256
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.24 E-value=1.5e-06 Score=76.33 Aligned_cols=106 Identities=19% Similarity=0.255 Sum_probs=67.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcce-echhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCCC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHV-LTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLER 248 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~-~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (381)
.+++|||+|+.|+.+|..|++.|.+|+++.+.+..- .+.. ..++.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~---------------------------------~~~~~- 48 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASH---------------------------------SHGFL- 48 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSC---------------------------------CCSST-
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchh---------------------------------hcCCc-
Confidence 479999999999999999999999999999865110 0000 00000
Q ss_pred CCCCCcccccccCCCccccchhhhhhcCC-CeEEccC-cceEeCC----eEEEcCCcEeeccEEEEecCCCCCcc
Q 035902 249 PKKGPFYFKAITGQTPTIDVGAMDKIRKG-EIQVFPS-ITSINRN----EVEFENGKIEEFEAIIFATGYKSTVR 317 (381)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~-v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~~~ 317 (381)
... ......+...+.+.+++. +++++.. ++.++.+ .+.+.+++++.+|.+|+|||.+|..+
T Consensus 49 -~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~ 115 (297)
T 3fbs_A 49 -GQD-------GKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELP 115 (297)
T ss_dssp -TCT-------TCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECC
T ss_pred -CCC-------CCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCC
Confidence 000 000001111223334443 6777666 7777643 56777888999999999999987653
No 257
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.22 E-value=1.7e-06 Score=81.55 Aligned_cols=42 Identities=31% Similarity=0.486 Sum_probs=39.0
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC-CCeEEEecCCCCCCCcCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLS-VPNIILEREDCSASLWKK 44 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g-~~v~lie~~~~~g~~~~~ 44 (381)
++||+|||||++|+++|+.|++.| .+|+|+|+++.+||.+..
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~ 51 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRS 51 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeee
Confidence 489999999999999999999998 799999999999997765
No 258
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.21 E-value=8.5e-06 Score=79.05 Aligned_cols=105 Identities=14% Similarity=0.100 Sum_probs=74.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
.+|+|||||+.|+.+|..|++.|.+|+++++.. +. +. ...++.+.+
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l-------------------------------~~--~d~~~~~~~ 332 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRSI-LL-------------------------------RG--FDQQMAEKV 332 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS-------------------------------TT--SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECCc-Cc-------------------------------Cc--CCHHHHHHH
Confidence 579999999999999999999999999999862 11 00 123666777
Q ss_pred HHHHHHhCCccccccEEEEEEEe-----CC--CCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYD-----EN--AKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~-----~~--~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|+++++++.+..+... .. .+...+..... .++...+.+|.||+|+|..|+..
T Consensus 333 ~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~-~g~~~~~~~D~vi~a~G~~p~~~ 398 (598)
T 2x8g_A 333 GDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYT-DGKKFEEEFETVIFAVGREPQLS 398 (598)
T ss_dssp HHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEET-TSCEEEEEESEEEECSCEEECGG
T ss_pred HHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeC-CCcEEeccCCEEEEEeCCccccC
Confidence 77888889999999888877543 11 13433443211 11223456999999999997653
No 259
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.20 E-value=2.5e-06 Score=79.28 Aligned_cols=105 Identities=25% Similarity=0.317 Sum_probs=72.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhh--CCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCCC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSS--CGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGLE 247 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~--~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (381)
++++|||+|+.|+.+|..|++ .+.+|+++.+.+....... ......... ..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~---~~~~~~g~~--------------------~~---- 55 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPA---FPHLAMGWR--------------------KF---- 55 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGG---HHHHHHTCS--------------------CG----
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCC---cchhccCcc--------------------CH----
Confidence 689999999999999999999 6789999999883221110 000000000 00
Q ss_pred CCCCCCcccccccCCCccccchhhhhhcCCCeEEccC-cceEeCC--eEEEcCCcEeeccEEEEecCCCCCcc
Q 035902 248 RPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS-ITSINRN--EVEFENGKIEEFEAIIFATGYKSTVR 317 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~v~~~--~v~~~~g~~~~~D~vi~a~G~~p~~~ 317 (381)
..+...+.+.+++.+++++.+ ++.++.+ .+.+++++++.+|.+|+|||.+|+.+
T Consensus 56 ----------------~~~~~~~~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~~p 112 (430)
T 3h28_A 56 ----------------EDISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLVFG 112 (430)
T ss_dssp ----------------GGSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEECC
T ss_pred ----------------HHHHHHHHHHHHhcCCEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccccC
Confidence 011112234455678888888 8888865 68888998999999999999997764
No 260
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.18 E-value=4.3e-06 Score=73.97 Aligned_cols=100 Identities=16% Similarity=0.094 Sum_probs=73.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++++|||+|+.|+.+|..|.+.+.+|+++++.+.+. ... ..+
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~~ 189 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR-----------------------------------AAP---STV 189 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB-----------------------------------SCH---HHH
T ss_pred CEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC-----------------------------------CCH---HHH
Confidence 679999999999999999999999999999876321 011 223
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
++..++.++++++++.+.++..++ .....+.+. ...++...+.+|.||+|+|..|...
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~~-~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~p~~~ 247 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGDK-MGVAGVKVK-LKDGSIRDLNVPGIFTFVGLNVRNE 247 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEET-TEEEEEEEE-CTTSCEEEECCSCEEECSCEEECCG
T ss_pred HHHHhcCCeEEEeCcEEEEEEcCC-CcEEEEEEE-cCCCCeEEeecCeEEEEEcCCCCch
Confidence 344466799999999999998764 122235555 1122345799999999999987654
No 261
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.18 E-value=1.3e-06 Score=82.93 Aligned_cols=41 Identities=24% Similarity=0.336 Sum_probs=37.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWK 43 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~ 43 (381)
.+||+|||||++|+++|+.|++.|++|+|+|+++.+||.+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 53 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLR 53 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCcee
Confidence 37999999999999999999999999999999999988543
No 262
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.18 E-value=1.5e-06 Score=81.86 Aligned_cols=39 Identities=26% Similarity=0.387 Sum_probs=36.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL 41 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~ 41 (381)
.+||+|||||++|++||+.|++.|.+|+|+|+++.+||.
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGA 54 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 489999999999999999999999999999999988873
No 263
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.16 E-value=9.8e-06 Score=77.15 Aligned_cols=100 Identities=12% Similarity=0.089 Sum_probs=74.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||..|+.+|..|++.+.+|+++++.+.+. .. ..+
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------------------------~~-----~~l 396 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------AD-----QVL 396 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------------------------SC-----HHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------------------------cC-----HHH
Confidence 689999999999999999999999999999875221 00 223
Q ss_pred HHHHHH-hCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQ-MGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~-~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++ .++++++++.+..+..++ .+...+.+.++..++...+.+|.||+|+|..|+..
T Consensus 397 ~~~l~~~~gV~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~ 456 (521)
T 1hyu_A 397 QDKVRSLKNVDIILNAQTTEVKGDG-SKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTH 456 (521)
T ss_dssp HHHHTTCTTEEEECSEEEEEEEECS-SSEEEEEEEETTTCCEEEEECSEEEECCCEEESCG
T ss_pred HHHHhcCCCcEEEeCCEEEEEEcCC-CcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCch
Confidence 334444 588999999999997653 22223666664444556899999999999887653
No 264
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.15 E-value=3.4e-06 Score=77.81 Aligned_cols=105 Identities=17% Similarity=0.239 Sum_probs=72.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhh---CCCeeEEEEecCcceechhhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCccccCC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSS---CGACTSIVVRGPVHVLTREIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKYGL 246 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~---~g~~v~~i~r~~~~~~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (381)
++++|||+|+.|+.+|..|++ .|.+|+++.+.+....... +
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~------------------------------------~ 45 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPA------------------------------------L 45 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCS------------------------------------S
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccc------------------------------------h
Confidence 579999999999999999999 8899999999883211000 0
Q ss_pred CCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC-cceEeCC--eEEEcCCcE----eeccEEEEecCCCCCcc
Q 035902 247 ERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS-ITSINRN--EVEFENGKI----EEFEAIIFATGYKSTVR 317 (381)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-v~~v~~~--~v~~~~g~~----~~~D~vi~a~G~~p~~~ 317 (381)
.... ........+...+.+.+++.+++++.+ ++.++.+ .+.+.+++. +++|.+|+|+|.+|+.+
T Consensus 46 ~~~~-------~~~~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 46 PHVA-------IGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp CCCC-------SSCCCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEECGG
T ss_pred hhcc-------cCCcCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcCcc
Confidence 0000 000001112223455666678888888 8888765 677777753 89999999999998864
No 265
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.15 E-value=1.8e-06 Score=81.76 Aligned_cols=39 Identities=28% Similarity=0.428 Sum_probs=36.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL 41 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~ 41 (381)
++||+|||||++|++||+.|++.|.+|+|+|+++.+||.
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 489999999999999999999999999999999998884
No 266
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.14 E-value=2e-06 Score=81.53 Aligned_cols=38 Identities=24% Similarity=0.386 Sum_probs=36.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASL 41 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~ 41 (381)
+||+|||||++|++||+.|++.|.+|+|+|+++.+||.
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGR 77 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTT
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 79999999999999999999999999999999988873
No 267
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.14 E-value=4.6e-06 Score=82.22 Aligned_cols=101 Identities=13% Similarity=0.030 Sum_probs=72.7
Q ss_pred ccEEEEC--CCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 4 VPVVIVG--AGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 4 ~~vvIIG--aG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
.+|+||| +|..|+.+|..|++.|.+|+++++.+.+.... .......
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~--------------------------------~~~~~~~ 571 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWT--------------------------------NNTFEVN 571 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGG--------------------------------GGGTCHH
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccccc--------------------------------ccchhHH
Confidence 5699999 99999999999999999999999876432100 0012234
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+.+++.|++++.+++|.++..+ . +.+.....++.+.+.+|.||+|+|..|+.
T Consensus 572 ~l~~~l~~~GV~i~~~~~V~~i~~~----~--~~v~~~~~~~~~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 572 RIQRRLIENGVARVTDHAVVAVGAG----G--VTVRDTYASIERELECDAVVMVTARLPRE 626 (690)
T ss_dssp HHHHHHHHTTCEEEESEEEEEEETT----E--EEEEETTTCCEEEEECSEEEEESCEEECC
T ss_pred HHHHHHHHCCCEEEcCcEEEEEECC----e--EEEEEccCCeEEEEECCEEEECCCCCCCh
Confidence 5566677789999999999988743 2 22222111233689999999999998764
No 268
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.09 E-value=2.9e-06 Score=77.07 Aligned_cols=40 Identities=20% Similarity=0.275 Sum_probs=37.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWK 43 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~ 43 (381)
+||+|||||++|+++|+.|++.|.+|+|+|+++.+||...
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~ 41 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAY 41 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceE
Confidence 7899999999999999999999999999999999988544
No 269
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.08 E-value=1.4e-05 Score=70.73 Aligned_cols=103 Identities=17% Similarity=0.152 Sum_probs=69.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+|+++.... .... .. .
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~----------------------------------~~~~-~~---~ 194 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF----------------------------------RASK-TM---Q 194 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC----------------------------------CSCH-HH---H
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc----------------------------------cccc-hh---h
Confidence 67999999999999999999999999999976411 0111 11 1
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEV 145 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~ 145 (381)
.......+...+..+.+..+..... ..-.+...+....+.+.+.+|.|++|+|..|+...+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l 255 (314)
T 4a5l_A 195 ERVLNHPKIEVIWNSELVELEGDGD-LLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFL 255 (314)
T ss_dssp HHHHTCTTEEEECSEEEEEEEESSS-SEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG
T ss_pred hhhhcccceeeEeeeeeEEEEeeee-ccceeEEeecccccceeeccccceEecccccChhHh
Confidence 1222333455566666666665431 222245555444456789999999999999876543
No 270
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.04 E-value=3.3e-06 Score=76.56 Aligned_cols=34 Identities=29% Similarity=0.424 Sum_probs=32.3
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++||+|||||++|+++|++|+++|.+|+|+|+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 5899999999999999999999999999999875
No 271
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.03 E-value=2.5e-06 Score=79.28 Aligned_cols=33 Identities=30% Similarity=0.372 Sum_probs=31.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
+||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 789999999999999999999999999999875
No 272
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.02 E-value=5.8e-06 Score=76.85 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=38.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK 44 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~ 44 (381)
++||+|||||++|+++|..|++.|.+|+++|+++.+||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 589999999999999999999999999999999999986543
No 273
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.02 E-value=4.6e-06 Score=77.67 Aligned_cols=42 Identities=21% Similarity=0.264 Sum_probs=38.5
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWK 43 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~ 43 (381)
+++||+|||+|.+|+++|+.|++.|.+|+++|+++.+||.+.
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~ 60 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETA 60 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcc
Confidence 358999999999999999999999999999999999998543
No 274
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.98 E-value=6.6e-06 Score=77.42 Aligned_cols=42 Identities=29% Similarity=0.434 Sum_probs=37.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCCCCCCCcCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV-PNIILEREDCSASLWKK 44 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~~~g~~~~~ 44 (381)
++||+|||||++|+++|+.|.+.|. +|+|+|+++.+||.+..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 4899999999999999999999998 89999999988886543
No 275
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.94 E-value=9.6e-06 Score=72.66 Aligned_cols=36 Identities=33% Similarity=0.349 Sum_probs=33.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSA 39 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g 39 (381)
+||+|||||+||+.+|..|++.|.+|+|+|++...+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 789999999999999999999999999999887443
No 276
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.92 E-value=6.6e-06 Score=77.97 Aligned_cols=40 Identities=33% Similarity=0.362 Sum_probs=37.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCc
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLW 42 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~ 42 (381)
.+||+|||||++|+++|+.|++.|.+|+|+|+++.+||.+
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~ 72 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRV 72 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCce
Confidence 4799999999999999999999999999999999888843
No 277
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.91 E-value=1.5e-05 Score=70.28 Aligned_cols=33 Identities=15% Similarity=0.297 Sum_probs=30.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-.++|||+|+.|+.+|..+++.|.+|+++.+..
T Consensus 7 yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 7 IDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred cCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 368999999999999999999999999999764
No 278
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.88 E-value=2.7e-05 Score=72.94 Aligned_cols=85 Identities=11% Similarity=0.105 Sum_probs=62.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|..|+-+|..|++.|.+|+++++.+.+.+ . .++
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~~~~-----------------------~----~~~------------ 238 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTAPMG-----------------------Y----KWP------------ 238 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSCCCC-----------------------C----CCC------------
T ss_pred CEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCCCCC-----------------------C----CCC------------
Confidence 6899999999999999999999999999998763210 0 000
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPEVP 146 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~~~ 146 (381)
.++.++ ..|..+. + +. |.+.+| ..+.+|.||+|||..|..+-++
T Consensus 239 ------~~V~~~--~~V~~i~--~--~~--V~~~dG-----~~i~~D~Vi~atG~~p~~~~l~ 282 (464)
T 2xve_A 239 ------ENWDER--PNLVRVD--T--EN--AYFADG-----SSEKVDAIILCTGYIHHFPFLN 282 (464)
T ss_dssp ------TTEEEC--SCEEEEC--S--SE--EEETTS-----CEEECSEEEECCCBCCCCTTBC
T ss_pred ------CceEEc--CCeEEEe--C--CE--EEECCC-----CEEeCCEEEECCCCCCCCCCcC
Confidence 144443 5566663 2 33 777766 5689999999999998876543
No 279
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.85 E-value=2e-05 Score=72.61 Aligned_cols=130 Identities=18% Similarity=0.276 Sum_probs=73.8
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechh----------------h-------HHH-HHHHHhhCcHH
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTRE----------------I-------VFA-GMLLLKFLPCK 224 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~----------------~-------~~~-~~~~~~~l~~~ 224 (381)
..+|+|||+|++|+.+|..|++.|.+|+++.+.+. +.... . ... ...+..+-+..
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~-~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARA-PGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS-SCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC-CCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 45899999999999999999999999999998872 21000 0 000 01111111111
Q ss_pred HHHHHHHHHhhhhhcCccccCCCCCC--CCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC--C--eEEEc
Q 035902 225 LVDFIVVMLSKMKFGNLFKYGLERPK--KGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR--N--EVEFE 296 (381)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~--~--~v~~~ 296 (381)
..+ + +...++.... .+..+ .......+...+.+.+++.+++++.+ |+++.. + .|.+.
T Consensus 106 ~~~----~--------~~~~Gi~~~~~~~g~~~---~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~ 170 (417)
T 3v76_A 106 FVA----L--------VERHGIGWHEKTLGQLF---CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTS 170 (417)
T ss_dssp HHH----H--------HHHTTCCEEECSTTEEE---ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEET
T ss_pred HHH----H--------HHHcCCCcEEeeCCEEe---eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEEC
Confidence 111 1 1122222111 11111 01111233344566666678899887 777753 3 34555
Q ss_pred CCcEeeccEEEEecCCCCC
Q 035902 297 NGKIEEFEAIIFATGYKST 315 (381)
Q Consensus 297 ~g~~~~~D~vi~a~G~~p~ 315 (381)
+| ++.+|.||.|+|..+.
T Consensus 171 ~g-~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 171 AG-TVDAASLVVASGGKSI 188 (417)
T ss_dssp TE-EEEESEEEECCCCSSC
T ss_pred Cc-EEEeeEEEECCCCccC
Confidence 66 8999999999999874
No 280
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.82 E-value=8e-06 Score=73.63 Aligned_cols=33 Identities=27% Similarity=0.486 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC------CCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLS------VPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g------~~v~lie~~~ 36 (381)
+||+|||||++|+++|++|+++| .+|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999998 8999999986
No 281
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.81 E-value=4.6e-05 Score=77.83 Aligned_cols=98 Identities=16% Similarity=0.155 Sum_probs=71.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||+|+.|+.+|..|++.|.+|+|+++.+.+. . .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------------------------------~-~----- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------------------------------A-A----- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC------------------------------------H-H-----
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc------------------------------------h-h-----
Confidence 579999999999999999999999999999876211 0 1
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEee--cC--CCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKN--TA--LDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~--~~--~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
.+.+++.|+++++++.+.++..+.+.+...|.+.+ .. .++..++.+|.||+|+|..|+..
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~ 386 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVH 386 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCH
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChH
Confidence 23456779999999999999863112322355544 10 11236799999999999987753
No 282
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.78 E-value=0.00015 Score=64.06 Aligned_cols=101 Identities=17% Similarity=0.181 Sum_probs=64.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINYV 83 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (381)
++|+|||||+.|+.+|..|++.|.+|+|+++.+.+. +.....
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~~----------------------------------~~~~~~---- 187 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDELR----------------------------------AQRILQ---- 187 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC----------------------------------SCHHHH----
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEecccccC----------------------------------cchhHH----
Confidence 689999999999999999999999999999876321 111111
Q ss_pred HHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCC
Q 035902 84 DNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIP 143 (381)
Q Consensus 84 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~ 143 (381)
....+..++.......+..+...+. ..-..............+.+|.|++++|..|...
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~ 246 (312)
T 4gcm_A 188 DRAFKNDKIDFIWSHTLKSINEKDG-KVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTA 246 (312)
T ss_dssp HHHHHCTTEEEECSEEEEEEEEETT-EEEEEEEEETTTCCEEEEECSEEEECSCEEESCG
T ss_pred HHHHHhcCcceeeecceeeeecccc-ccccceeeeecCCceeEEeeeeEEeecCCCcCch
Confidence 1223333444455555554444331 1111222233333457899999999999997654
No 283
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.77 E-value=5.2e-05 Score=71.64 Aligned_cols=126 Identities=17% Similarity=0.197 Sum_probs=73.1
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechh---hHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCcccc
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTRE---IVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKY 244 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 244 (381)
...+|+|||+|++|+.+|..|++.|.+|+++.+.+. +.... ...........+... . . ...
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~-~g~~~~~~~~~~~~~~l~~~g~~--~----~-----~~~---- 154 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK-FSRHNVLHLWPFTIHDLRALGAK--K----F-----YGR---- 154 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS-CCCCCEEECCHHHHHHHHTTTHH--H----H-----CTT----
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc-cCCCCcccCChhHHHHHHHcCCc--c----c-----ccc----
Confidence 467899999999999999999999999999998862 21000 000000011111100 0 0 000
Q ss_pred CCCCCCCCCcccccccCCCccccchhhhhhcCCCeEEccC--cceEeC-----C--eEEE--c-CC--cEeeccEEEEec
Q 035902 245 GLERPKKGPFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINR-----N--EVEF--E-NG--KIEEFEAIIFAT 310 (381)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~-----~--~v~~--~-~g--~~~~~D~vi~a~ 310 (381)
+... ... ......+...+.+.+++.+++++.+ |+++.. + .+.+ . +| +++.+|.||.|+
T Consensus 155 -~~~~---~~~----~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~ 226 (497)
T 2bry_A 155 -FCTG---TLD----HISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAA 226 (497)
T ss_dssp -TTCT---TCC----EEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECC
T ss_pred -cccc---ccc----cCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECC
Confidence 0000 000 0001222334455566678888877 777764 1 4555 3 55 578999999999
Q ss_pred CCCCCcc
Q 035902 311 GYKSTVR 317 (381)
Q Consensus 311 G~~p~~~ 317 (381)
|..+...
T Consensus 227 G~~S~~r 233 (497)
T 2bry_A 227 GGKFVPE 233 (497)
T ss_dssp CTTCCCT
T ss_pred CCCcccc
Confidence 9998764
No 284
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.76 E-value=2.1e-05 Score=77.13 Aligned_cols=40 Identities=28% Similarity=0.408 Sum_probs=37.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCc
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLW 42 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~ 42 (381)
.+||+|||||++|+++|+.|.+.|++|+|+|+.+.+||.+
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~ 146 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 146 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTC
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcc
Confidence 3799999999999999999999999999999999888843
No 285
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.75 E-value=2.4e-05 Score=70.32 Aligned_cols=32 Identities=19% Similarity=0.398 Sum_probs=29.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|+|||+|..|+.+|..|++.+ +|+++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 68999999999999999999998 699998773
No 286
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.75 E-value=2.3e-05 Score=78.27 Aligned_cols=40 Identities=28% Similarity=0.408 Sum_probs=37.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCc
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLW 42 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~ 42 (381)
.++|+|||||++|+++|+.|++.|++|+|+|+.+.+||.+
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~ 317 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRV 317 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCce
Confidence 3789999999999999999999999999999999888853
No 287
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.75 E-value=6.3e-05 Score=70.15 Aligned_cols=83 Identities=11% Similarity=0.015 Sum_probs=60.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCC-eEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVP-NIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~-v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
++|+|||+|..|+-+|..|++.+.+ |+++++...+
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~-------------------------------------------- 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD-------------------------------------------- 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS--------------------------------------------
T ss_pred CEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc--------------------------------------------
Confidence 6899999999999999999999998 9999987521
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLIPE 144 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~~~ 144 (381)
++..++ ..+..|..+..++ .. |.+.+| ...+.+|.||+|||..|..+-
T Consensus 249 ----l~~~~i--~~~~~v~~~~~~~--~~--v~~~dG----~~~~~~D~vi~atG~~~~~~~ 296 (447)
T 2gv8_A 249 ----IQNESL--QQVPEITKFDPTT--RE--IYLKGG----KVLSNIDRVIYCTGYLYSVPF 296 (447)
T ss_dssp ----CBCSSE--EEECCEEEEETTT--TE--EEETTT----EEECCCSEEEECCCBCCCCCC
T ss_pred ----CCCCCe--EEecCeEEEecCC--CE--EEECCC----CEeccCCEEEECCCCCcCCCC
Confidence 001132 2345566664322 33 777765 133789999999999988765
No 288
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.74 E-value=9.5e-05 Score=70.53 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=32.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDC 37 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~ 37 (381)
++|+|||+|..|+.+|..|++.+.+|+++++.+.
T Consensus 179 krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 179 RRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 7899999999999999999999999999999875
No 289
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.74 E-value=0.00015 Score=67.75 Aligned_cols=139 Identities=14% Similarity=0.121 Sum_probs=74.1
Q ss_pred ccEEEECCCHHHHHHHHHHH--------------------hCCC-CeEEEecCCCCCCCcCCCC------CCCeeeecCC
Q 035902 4 VPVVIVGAGPAGLATSACLN--------------------NLSV-PNIILEREDCSASLWKKRA------YDRMKLHLAK 56 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~--------------------~~g~-~v~lie~~~~~g~~~~~~~------~~~~~~~~~~ 56 (381)
++|+|||+|..|+.+|..|+ +.+. +|+|+++...+...+...- .+........
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~lp~~~~~~~~ 225 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQLPGTRPMLDP 225 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTCTTEEEECCG
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcCCCceeEech
Confidence 67999999999999999999 5677 6999998763211000000 0000000000
Q ss_pred cccccCCCCCCCCCCCCCC-HHHHHHHHHHHHHH--------------hCCccccccEEEEEEEeCCC-CeEEEEEeecC
Q 035902 57 QFCELPHMPFPSRTPTFVP-RISFINYVDNYVSQ--------------MGINPRYHRSVESASYDENA-KAWIIVAKNTA 120 (381)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--------------~~~~~~~~~~v~~i~~~~~~-~~~~v~~~~~~ 120 (381)
. .+... ...++.... ...+.+.+++.+.+ .++.+++++.+..+..+++. ..-.|.+.+..
T Consensus 226 ~--~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~ 301 (460)
T 1cjc_A 226 A--DFLGL--QDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTR 301 (460)
T ss_dssp G--GGTTH--HHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSSEEEEEEEEEE
T ss_pred h--hhcch--hhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCceEEEEEEEEEE
Confidence 0 00000 000001111 12244455555544 67889999999888764312 11113332100
Q ss_pred ------------CCceEEEEeCEEEEccCCCCCCCCCCCC
Q 035902 121 ------------LDAYEEYVARYLVVATGENGLIPEVPGL 148 (381)
Q Consensus 121 ------------~~~~~~~~~d~vIlAtG~~~~~~~~~g~ 148 (381)
.++.+.+.+|.||+|+|..|.. ++|+
T Consensus 302 l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~--l~gl 339 (460)
T 1cjc_A 302 LEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRP--IDPS 339 (460)
T ss_dssp EESSGGGCEEEEEEEEEEEECSEEEECCCEECCC--CCTT
T ss_pred EccccCCCcccCCCceEEEEcCEEEECCCCCCCC--CCCC
Confidence 1123679999999999999875 3454
No 290
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.72 E-value=6.5e-05 Score=74.45 Aligned_cols=102 Identities=12% Similarity=-0.010 Sum_probs=69.6
Q ss_pred ccEEEEC--CCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHH
Q 035902 4 VPVVIVG--AGPAGLATSACLNNLSVPNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFIN 81 (381)
Q Consensus 4 ~~vvIIG--aG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (381)
++|+||| ||..|+.+|..|++.|.+|+|+++.+ +... ..+.. . ..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~-----------------------------~~~~~--~-~~ 575 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANY-----------------------------MHFTL--E-YP 575 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHH-----------------------------HHHTT--C-HH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccc-----------------------------ccccc--c-HH
Confidence 5899999 99999999999999999999999876 3210 00000 0 23
Q ss_pred HHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEE--eecCC--------------CceEEEEeCEEEEccCCCCCC
Q 035902 82 YVDNYVSQMGINPRYHRSVESASYDENAKAWIIVA--KNTAL--------------DAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~--~~~~~--------------~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+.+++.|+++++++.+.++..+ ...+.. .++.. +....+.+|.||+|+|..|..
T Consensus 576 ~~~~~l~~~GV~i~~~~~v~~i~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 576 NMMRRLHELHVEELGDHFCSRIEPG----RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEETT----EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred HHHHHHHhCCCEEEcCcEEEEEECC----eEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 4445566779999999999988632 222322 11100 112359999999999998764
No 291
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.68 E-value=5.2e-05 Score=66.85 Aligned_cols=189 Identities=15% Similarity=0.226 Sum_probs=98.8
Q ss_pred eEEEEcCCCCHHHHHHHHhhC--CCeeEEEEecCcceechhhHHHHHHHHh-hCcHHHHHHHHHHHhhhhhcCccccCCC
Q 035902 171 NVLVVGCGNSGMEIAYDLSSC--GACTSIVVRGPVHVLTREIVFAGMLLLK-FLPCKLVDFIVVMLSKMKFGNLFKYGLE 247 (381)
Q Consensus 171 ~v~viG~G~~~~e~a~~l~~~--g~~v~~i~r~~~~~~p~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (381)
+++|||+|+.|+.+|..|++. |.+|.++.+.+. .--.... ....+.. ........ .+...++.
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~-~ggg~~~-~g~~~~~~~~~~~~~~------------~L~~~Gv~ 132 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVA-PGGGSWL-GGQLFSAMVMRKPAHL------------FLQELEIP 132 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSS-CCTTTTC-CGGGCCCEEEETTTHH------------HHHHTTCC
T ss_pred CEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcc-ccccccc-cCcccchhhhhhHHHH------------HHHhhCcc
Confidence 799999999999999999998 899999998762 1100000 0000000 00000000 01122222
Q ss_pred CCCCCCcccccccCCCccccchhhhhhcC-CCeEEccC--cceEeC----C-------eEEEc--------------CCc
Q 035902 248 RPKKGPFYFKAITGQTPTIDVGAMDKIRK-GEIQVFPS--ITSINR----N-------EVEFE--------------NGK 299 (381)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~--v~~v~~----~-------~v~~~--------------~g~ 299 (381)
....+.+.... ..+.+...+.+.+.+ .+++++.+ ++.+.. + ++... ++.
T Consensus 133 ~~~~g~~~~~~---~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~ 209 (326)
T 2gjc_A 133 YEDEGDYVVVK---HAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPN 209 (326)
T ss_dssp CEECSSEEEES---CHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCE
T ss_pred cccCCCeEEEc---chHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCce
Confidence 21112111110 112223334555555 58998877 655531 1 23321 335
Q ss_pred Eeec---------------cEEEEecCCCCCcchhccccCCcccccCCCCC----CC--------CCCC--CCCCCcEEE
Q 035902 300 IEEF---------------EAIIFATGYKSTVRNWLKRADKDFFDEYGMPK----RN--------CPNH--WKGENGLYC 350 (381)
Q Consensus 300 ~~~~---------------D~vi~a~G~~p~~~~~~~~~~~~~~~~~g~~~----~~--------~~~~--~~~~~~ifa 350 (381)
++.+ +.||.|||....+..++. .....++..+.+. .+ .+.. +...|++|+
T Consensus 210 ~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 288 (326)
T 2gjc_A 210 VIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA-KRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYF 288 (326)
T ss_dssp EEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHH-HHHHHHHSSCCCCCCCCBCHHHHHHHHHHHCEECTTSTTEEE
T ss_pred EEEEeeccccccccccccCCEEEECcCCCchHHHHHH-hhccccccccccCceeccccccchhheeecCCCccccCCEEE
Confidence 7889 999999999977655544 2111122222111 11 0011 125699999
Q ss_pred Eecccc--------ccc--CccHHHHHHHHHhhhccc
Q 035902 351 AGFSRT--------GLH--GISIDAKNIANDINLALT 377 (381)
Q Consensus 351 ~Gd~~~--------~~~--~a~~~a~~~a~~i~~~l~ 377 (381)
+|.... ++. ....+|+.+|+.|.+.|+
T Consensus 289 ~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 289 AGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 997642 222 666899999999988775
No 292
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.67 E-value=7.6e-05 Score=73.33 Aligned_cols=127 Identities=13% Similarity=0.024 Sum_probs=67.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEec--CCCCCC--Cc-CCC----CCCCeeeecCCcccccCCCCCCCCCCCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILER--EDCSAS--LW-KKR----AYDRMKLHLAKQFCELPHMPFPSRTPTFV 74 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~--~~~~g~--~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (381)
++|+|||||+.|+.+|..|++.|.+++++-. ....+. .+ ... ..+... .......-+...+ ..+....
T Consensus 495 ~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~v~l~~~~~--~~l~~~l 571 (671)
T 1ps9_A 495 NKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIP-RSPRQIVMLQRKA--SKPGQGL 571 (671)
T ss_dssp SEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCC-CCSSEEEEECSSC--SCTTTTS
T ss_pred CeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccC-CCCcEEEEEEecc--hhhcccc
Confidence 6899999999999999999998877654200 000000 00 000 000000 0000000000000 0001000
Q ss_pred CHHHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEeecCCCceEEEEeCEEEEccCCCCCC
Q 035902 75 PRISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWIIVAKNTALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
......++.+.+++.|++++.++++.+++. +...+. .++ +...+.+|.||+|+|..|+.
T Consensus 572 -~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~----~~v~~~-~~G---~~~~i~~D~Vi~a~G~~p~~ 630 (671)
T 1ps9_A 572 -GKTTGWIHRTTLLSRGVKMIPGVSYQKIDD----DGLHVV-ING---ETQVLAVDNVVICAGQEPNR 630 (671)
T ss_dssp -CTTTHHHHHHHHHHTTCEEECSCEEEEEET----TEEEEE-ETT---EEEEECCSEEEECCCEEECC
T ss_pred -ccccHHHHHHHHHhcCCEEEeCcEEEEEeC----CeEEEe-cCC---eEEEEeCCEEEECCCccccH
Confidence 112334455667778999999999988862 232232 333 33679999999999999764
No 293
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.67 E-value=0.00011 Score=68.62 Aligned_cols=100 Identities=15% Similarity=0.044 Sum_probs=63.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCC-eEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVP-NIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~-v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
++|+|||||..|+-+|..+.+.|.+ |+++++.+... ++.. ..+
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~------------------------------~p~~--~~e---- 308 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKN------------------------------MPGS--QRE---- 308 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTT------------------------------CSSC--HHH----
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccC------------------------------CCCC--HHH----
Confidence 6799999999999999999999985 99998875210 0111 112
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeEEEEEe---------ecC------CCceEEEEeCEEEEccCCCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAWIIVAK---------NTA------LDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~v~~~---------~~~------~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
.+.+++.|+++++++.+..+..+. ..-.|.+. +|. .+....+.+|.||+|+|..|..
T Consensus 309 -~~~~~~~Gv~~~~~~~~~~i~~~g--~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~ 380 (456)
T 2vdc_G 309 -VAHAEEEGVEFIWQAAPEGFTGDT--VVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPED 380 (456)
T ss_dssp -HHHHHHTTCEEECCSSSCCEEEEE--EEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCC
T ss_pred -HHHHHHCCCEEEeCCCceEEeCCC--cEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCc
Confidence 123455688888877666664321 10001111 110 1123579999999999998754
No 294
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=97.65 E-value=8e-05 Score=68.29 Aligned_cols=33 Identities=21% Similarity=0.465 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.+++|||+|++|+.+|..+++.|.+|+++.+.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 469999999999999999999999999999886
No 295
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.64 E-value=0.00022 Score=66.52 Aligned_cols=129 Identities=16% Similarity=0.189 Sum_probs=70.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--------------------CC-CeEEEecCCCCCCCcCCCCCCCeeeecCCcccccC
Q 035902 4 VPVVIVGAGPAGLATSACLNNL--------------------SV-PNIILEREDCSASLWKKRAYDRMKLHLAKQFCELP 62 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~--------------------g~-~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 62 (381)
.+|+|||+|..|+.+|..|++. +. +|+|+++...+...+... .+ ..+..++
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~---el-----rel~~lp 219 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTL---EL-----RELADLD 219 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHH---HH-----HHGGGCT
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChH---HH-----HHhhcCC
Confidence 6799999999999999999874 54 899999876332111100 00 0000000
Q ss_pred CC---CCCCCCC-CC-------C-CHHHHHHHHHHHHHH------hCCccccccEEEEEEEeCCCCeEEEEEeec-----
Q 035902 63 HM---PFPSRTP-TF-------V-PRISFINYVDNYVSQ------MGINPRYHRSVESASYDENAKAWIIVAKNT----- 119 (381)
Q Consensus 63 ~~---~~~~~~~-~~-------~-~~~~~~~~~~~~~~~------~~~~~~~~~~v~~i~~~~~~~~~~v~~~~~----- 119 (381)
.. ..+.++. .. + ....+.+.+.+.+.+ .++.+++++.+..+..++.-.. |.+.+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~--v~~~~~~~~~~ 297 (456)
T 1lqt_A 220 GVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVER--IVLGRNELVSD 297 (456)
T ss_dssp TEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCE--EEEEEEEEEEC
T ss_pred CceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeE--EEEEEEEecCC
Confidence 00 0000000 00 0 011223444454444 5788899999988875421112 333210
Q ss_pred --------CCCceEEEEeCEEEEccCCCCCC
Q 035902 120 --------ALDAYEEYVARYLVVATGENGLI 142 (381)
Q Consensus 120 --------~~~~~~~~~~d~vIlAtG~~~~~ 142 (381)
..++.+.+.+|.||.|+|..|..
T Consensus 298 ~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~ 328 (456)
T 1lqt_A 298 GSGRVAAKDTGEREELPAQLVVRSVGYRGVP 328 (456)
T ss_dssp SSSSEEEEEEEEEEEEECSEEEECSCEECCC
T ss_pred CcccccccCCCceEEEEcCEEEEccccccCC
Confidence 01123579999999999999765
No 296
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=97.61 E-value=4.4e-05 Score=72.58 Aligned_cols=35 Identities=29% Similarity=0.439 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
...+++|||+|+.|+.+|..|++.|.+|+++.+.+
T Consensus 106 ~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~ 140 (549)
T 3nlc_A 106 LTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGK 140 (549)
T ss_dssp CCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccC
Confidence 35789999999999999999999999999999886
No 297
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.60 E-value=0.00024 Score=64.65 Aligned_cols=139 Identities=17% Similarity=0.127 Sum_probs=76.7
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceech--hh--HHHHHHHHhhCcHHHHHHHHHHHhhhhhcCcccc
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTR--EI--VFAGMLLLKFLPCKLVDFIVVMLSKMKFGNLFKY 244 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~--~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 244 (381)
..+|+|||+|++|+.+|..|++.|.+|+++.+.+. +.+. .. ..-...+.+.+. ..+.+.... . .....
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~-~~~~~~~~~l~~~~~~~l~~~g--~~~~~~~~~--~---~~~~~ 82 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE-LRAFGAGIYLWHNGLRVLEGLG--ALDDVLQGS--H---TPPTY 82 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS-CCCCSSEEEEEHHHHHHHHHTT--CHHHHHTTC--B---CCSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCCCCceEEeCccHHHHHHHcC--CHHHHHhhC--C---Cccce
Confidence 46899999999999999999999999999998872 2110 00 011111111111 001110000 0 00000
Q ss_pred CCCCCCCCCcccc-------cccCCCccccchhhhhhcCCCeEEccC--cceEeCC-eEEEcCCcEeeccEEEEecCCCC
Q 035902 245 GLERPKKGPFYFK-------AITGQTPTIDVGAMDKIRKGEIQVFPS--ITSINRN-EVEFENGKIEEFEAIIFATGYKS 314 (381)
Q Consensus 245 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~~~-~v~~~~g~~~~~D~vi~a~G~~p 314 (381)
.+... +..... .....+..+...+.+.+.+.+++++.+ |++++.+ .+.+.+|+++.+|.||.|+|..+
T Consensus 83 ~~~~~--g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 83 ETWMH--NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADGVGS 160 (379)
T ss_dssp EEEET--TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCCTTC
T ss_pred EEEeC--CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCCccH
Confidence 00000 000000 000111233344556666678888877 7777533 67778898999999999999887
Q ss_pred Ccc
Q 035902 315 TVR 317 (381)
Q Consensus 315 ~~~ 317 (381)
...
T Consensus 161 ~vr 163 (379)
T 3alj_A 161 KVR 163 (379)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 298
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=97.52 E-value=7.8e-05 Score=69.52 Aligned_cols=143 Identities=15% Similarity=0.274 Sum_probs=74.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechhh------------HHHHHHHHhhCcH--HHHHHHHHHH-h
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTREI------------VFAGMLLLKFLPC--KLVDFIVVML-S 234 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~~------------~~~~~~~~~~l~~--~~~~~~~~~~-~ 234 (381)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+. +..... .... .+...++. .+....+..+ .
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~-~g~~~~~sg~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK-LGRKLAISGGGRCNVTNRLPLD-EIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS-SCHHHHHTGGGTCCCEECSCHH-HHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC-CCceeEEeCCCceeccCcccHH-HHHHHhccChHHHHHHHHhcCH
Confidence 4799999999999999999999999999998762 210000 0000 11111100 0000000000 0
Q ss_pred hhhhcCccccCCCCCCCC-CcccccccCCCccccchhhhhhcCCCeEEccC--cceEe--CC---eEEEcCCcEeeccEE
Q 035902 235 KMKFGNLFKYGLERPKKG-PFYFKAITGQTPTIDVGAMDKIRKGEIQVFPS--ITSIN--RN---EVEFENGKIEEFEAI 306 (381)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--v~~v~--~~---~v~~~~g~~~~~D~v 306 (381)
.....-+...++...... ...+. .......+...+.+.+++.+++++.+ |+++. ++ +|.+.+|+++.+|.|
T Consensus 105 ~~~~~~~~~~G~~~~~~~~g~~~p-~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~V 183 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEEDHGRMFP-VSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNHV 183 (447)
T ss_dssp HHHHHHHHHTTCCEEECGGGEEEE-TTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSCE
T ss_pred HHHHHHHHhcCCceEEeeCCEEEC-CCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCEE
Confidence 000000112222110000 00000 00011222334566667788999877 77775 33 366778878999999
Q ss_pred EEecCCCCC
Q 035902 307 IFATGYKST 315 (381)
Q Consensus 307 i~a~G~~p~ 315 (381)
|+|+|..+.
T Consensus 184 VlAtGg~s~ 192 (447)
T 2i0z_A 184 VIAVGGKSV 192 (447)
T ss_dssp EECCCCSSS
T ss_pred EECCCCCcC
Confidence 999999874
No 299
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=97.51 E-value=0.00024 Score=65.78 Aligned_cols=32 Identities=34% Similarity=0.556 Sum_probs=30.1
Q ss_pred eEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 171 NVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 171 ~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
+++|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 68999999999999999999999999999854
No 300
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.50 E-value=3.8e-05 Score=68.16 Aligned_cols=33 Identities=33% Similarity=0.586 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhC--CCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSC--GACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~--g~~v~~i~r~~ 202 (381)
-+++|||+|+.|+-+|..|++. |.+|.++.+.+
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~ 114 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGV 114 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCC
Confidence 5799999999999999999997 89999999886
No 301
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.45 E-value=9.8e-05 Score=70.72 Aligned_cols=34 Identities=32% Similarity=0.553 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|++|||||++|+.+|.+|.+.|.+|+|+|+..
T Consensus 7 ~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~ 40 (546)
T 1kdg_A 7 PYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGG 40 (546)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred ceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 5899999999999999999999999999999875
No 302
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.43 E-value=0.00019 Score=68.67 Aligned_cols=34 Identities=24% Similarity=0.306 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+++|||+|.+|+.+|..|.+.|.+|+++.+.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 54 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAAS 54 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999999876
No 303
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.38 E-value=0.00012 Score=69.99 Aligned_cols=34 Identities=21% Similarity=0.370 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+++|||+|.+|+.+|..|.+.|.+|+++.+.+
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~ 42 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGE 42 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 3579999999999999999999999999999886
No 304
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.38 E-value=0.00079 Score=69.23 Aligned_cols=98 Identities=10% Similarity=0.005 Sum_probs=65.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCCCCCCCcCCCCCCCeeeecCCcccccCCCCCCCCCCCCCCHHHHHHH
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV-PNIILEREDCSASLWKKRAYDRMKLHLAKQFCELPHMPFPSRTPTFVPRISFINY 82 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (381)
.+|+|||||..|+.+|..+++.|. +|+++++.+.. ..+. ...++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~------------------------------~~~~--~~~e~--- 377 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFV------------------------------NIRA--VPEEV--- 377 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGG------------------------------GCCS--CHHHH---
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChh------------------------------hCCC--CHHHH---
Confidence 479999999999999999999996 89999987510 0000 11222
Q ss_pred HHHHHHHhCCccccccEEEEEEEeCCCCeE-EEEEee------cC----CCceEEEEeCEEEEccCCCC
Q 035902 83 VDNYVSQMGINPRYHRSVESASYDENAKAW-IIVAKN------TA----LDAYEEYVARYLVVATGENG 140 (381)
Q Consensus 83 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~-~v~~~~------~~----~~~~~~~~~d~vIlAtG~~~ 140 (381)
+.+++.|+++++++.+..+..++ +.. .|.+.+ +. .++...+.+|.||+|+|..|
T Consensus 378 --~~~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~ 442 (1025)
T 1gte_A 378 --ELAKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVL 442 (1025)
T ss_dssp --HHHHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEEC
T ss_pred --HHHHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCC
Confidence 23455699998888888886543 321 133221 00 01235789999999999975
No 305
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.34 E-value=0.00013 Score=69.52 Aligned_cols=34 Identities=29% Similarity=0.463 Sum_probs=31.3
Q ss_pred cccEEEECCCHHHHHHHHHHHh-CCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNN-LSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~-~g~~v~lie~~~ 36 (381)
+||+||||||+||+.+|.+|++ .+.+|+|+|+..
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~ 51 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGE 51 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSB
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCC
Confidence 4899999999999999999998 578999999875
No 306
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.32 E-value=0.0002 Score=67.73 Aligned_cols=38 Identities=24% Similarity=0.364 Sum_probs=34.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSA 39 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g 39 (381)
.++|++|||+|++|+.+|..|.+.|.+|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 46899999999999999999999999999999987443
No 307
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.32 E-value=8.3e-05 Score=71.44 Aligned_cols=33 Identities=27% Similarity=0.410 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+|+|||+|++|+-+|..|++.|.+|+++.|.+
T Consensus 50 ~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~ 82 (570)
T 3fmw_A 50 TDVVVVGGGPVGLMLAGELRAGGVGALVLEKLV 82 (570)
T ss_dssp -CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 479999999999999999999999999999886
No 308
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.30 E-value=0.00087 Score=61.30 Aligned_cols=141 Identities=18% Similarity=0.250 Sum_probs=75.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCcceechh----hHHHHHHHHhhCcHHHHHHHHHHHhhhhhcCc---c
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVLTRE----IVFAGMLLLKFLPCKLVDFIVVMLSKMKFGNL---F 242 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~p~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~ 242 (381)
.+|+|||+|..|+.+|..|++.|.+|+++.+.+. ..+.. .......+.+.+. ..+.+..... ..... .
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~-~~~~~~~~~l~~~~~~~l~~~g--~~~~~~~~~~--~~~~~~~~~ 81 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR-ERAINGADLLKPAGIRVVEAAG--LLAEVTRRGG--RVRHELEVY 81 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC-C---CCCCEECHHHHHHHHHTT--CHHHHHHTTC--EEECEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC-CCccCceeeECchHHHHHHHcC--cHHHHHHhCC--CcceeEEEe
Confidence 4799999999999999999999999999998862 21100 0011111111111 0111110000 00000 0
Q ss_pred ccC-----CCCCCCCCcccccccCCCccccchhhhhhcCC-CeEEccC--cceEeCC------eEEEcCCcEeeccEEEE
Q 035902 243 KYG-----LERPKKGPFYFKAITGQTPTIDVGAMDKIRKG-EIQVFPS--ITSINRN------EVEFENGKIEEFEAIIF 308 (381)
Q Consensus 243 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~--v~~v~~~------~v~~~~g~~~~~D~vi~ 308 (381)
..+ +......... ......+..+...+.+.+++. +++++.+ +++++.+ .+.+++|+++++|.||.
T Consensus 82 ~~g~~~~~~~~~~~~~~~-~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 82 HDGELLRYFNYSSVDARG-YFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp ETTEEEEEEETTSSCGGG-CEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCCEEEecchHHhcccC-ccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEE
Confidence 000 0000000000 001112223344456666666 8998877 7777542 45677888999999999
Q ss_pred ecCCCCCc
Q 035902 309 ATGYKSTV 316 (381)
Q Consensus 309 a~G~~p~~ 316 (381)
|+|.....
T Consensus 161 AdG~~s~v 168 (399)
T 2x3n_A 161 ADGIASYV 168 (399)
T ss_dssp CCCTTCHH
T ss_pred CCCCChHH
Confidence 99986543
No 309
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.30 E-value=7.8e-05 Score=72.67 Aligned_cols=35 Identities=29% Similarity=0.407 Sum_probs=33.3
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC--------CCeEEEecCC-CC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLS--------VPNIILERED-CS 38 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g--------~~v~lie~~~-~~ 38 (381)
++|+|||||++|++||+.|.+.| .+|+|+|+++ .+
T Consensus 57 ~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 57 YRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 68999999999999999999998 8999999998 88
No 310
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.26 E-value=0.00076 Score=61.69 Aligned_cols=34 Identities=29% Similarity=0.416 Sum_probs=32.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+|+|||+|++|+.+|..|++.|.+|+++.+.+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 38 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP 38 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4689999999999999999999999999999987
No 311
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.25 E-value=0.00019 Score=68.75 Aligned_cols=35 Identities=31% Similarity=0.371 Sum_probs=32.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCC-CCeEEEecCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLS-VPNIILEREDC 37 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g-~~v~lie~~~~ 37 (381)
+||++|||||.||+.+|.+|.+.+ .+|+|+|+...
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 499999999999999999999987 69999999865
No 312
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.23 E-value=0.00015 Score=69.21 Aligned_cols=35 Identities=31% Similarity=0.467 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCS 38 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~ 38 (381)
++|++|||||+||+.+|.+|.+ |.+|+|+|+....
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4899999999999999999999 9999999998643
No 313
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.21 E-value=0.0003 Score=67.50 Aligned_cols=138 Identities=15% Similarity=0.071 Sum_probs=72.4
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCccee-----chh----hHHHHHHHHhhCcHHHHHHHHHHHhhhhhcC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVL-----TRE----IVFAGMLLLKFLPCKLVDFIVVMLSKMKFGN 240 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~-----p~~----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (381)
-+|+|||+|..|+++|..+++.|.+|.++.+.+..+- |.. ...+...+.. +...+. .... .. .-.
T Consensus 28 yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~elda-lgg~~~-~~~d---~~-gi~ 101 (637)
T 2zxi_A 28 FDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDA-LGGEMG-KAID---QT-GIQ 101 (637)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHH-HTCSHH-HHHH---HH-EEE
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHH-hhhHHH-HHhh---hc-ccc
Confidence 5799999999999999999999999999998631110 100 0011111100 000000 0000 00 000
Q ss_pred ccccCCCCCCCCCcccc-cccCCCccccchhhhhhcC-CCeEEccC-cceEe--CC---eEEEcCCcEeeccEEEEecCC
Q 035902 241 LFKYGLERPKKGPFYFK-AITGQTPTIDVGAMDKIRK-GEIQVFPS-ITSIN--RN---EVEFENGKIEEFEAIIFATGY 312 (381)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~v~~~~~-v~~v~--~~---~v~~~~g~~~~~D~vi~a~G~ 312 (381)
++... ...++.... .....+..+...+.+.+++ .+++++.. |+.+. ++ +|.+.+|+++.+|.||+|||.
T Consensus 102 f~~l~---~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~ 178 (637)
T 2zxi_A 102 FKMLN---TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGT 178 (637)
T ss_dssp EEEES---TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTT
T ss_pred eeecc---cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCC
Confidence 00000 000000000 0000011233344556666 58888766 77764 33 467788989999999999998
Q ss_pred CCCc
Q 035902 313 KSTV 316 (381)
Q Consensus 313 ~p~~ 316 (381)
.++.
T Consensus 179 ~s~~ 182 (637)
T 2zxi_A 179 FLNG 182 (637)
T ss_dssp CBTC
T ss_pred CccC
Confidence 7654
No 314
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.21 E-value=0.00035 Score=67.24 Aligned_cols=42 Identities=12% Similarity=0.279 Sum_probs=39.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCCCCcCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSASLWKK 44 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g~~~~~ 44 (381)
+|||+|||+|..|...|..|++.|.+|++||++++.||.|..
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 599999999999999999999999999999999999997754
No 315
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=97.20 E-value=0.00072 Score=65.10 Aligned_cols=138 Identities=12% Similarity=0.090 Sum_probs=72.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecCccee-----ch----hhHHHHHHHHhhCcHHHHHHHHHHHhhhhhcC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGPVHVL-----TR----EIVFAGMLLLKFLPCKLVDFIVVMLSKMKFGN 240 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~~~~~-----p~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 240 (381)
-+|+|||+|..|+++|..+++.|.+|.++.+.+..+- |. ....+...+.. +...+. ...... .. .
T Consensus 29 yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~a-lgg~~~-~~~d~~-gi---~ 102 (651)
T 3ces_A 29 FDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDA-LGGLMA-KAIDQA-GI---Q 102 (651)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHH-TTCSHH-HHHHHH-EE---E
T ss_pred CCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHH-hccHHH-HHhhhc-cc---c
Confidence 4799999999999999999999999999998631110 00 00011111111 110000 000000 00 0
Q ss_pred ccccCCCCCCCCCcccc-cccCCCccccchhhhhhcC-CCeEEccC-cceEe--CC---eEEEcCCcEeeccEEEEecCC
Q 035902 241 LFKYGLERPKKGPFYFK-AITGQTPTIDVGAMDKIRK-GEIQVFPS-ITSIN--RN---EVEFENGKIEEFEAIIFATGY 312 (381)
Q Consensus 241 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~v~~~~~-v~~v~--~~---~v~~~~g~~~~~D~vi~a~G~ 312 (381)
++... ...++.... .....+..+...+.+.+++ .+++++.. |+.+. ++ +|.+.+|.++.+|.||+|||.
T Consensus 103 f~~l~---~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt 179 (651)
T 3ces_A 103 FRILN---ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGT 179 (651)
T ss_dssp EEEES---TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCST
T ss_pred hhhhh---cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCC
Confidence 00000 000000000 0000001223344556666 68888766 77774 33 466778888999999999998
Q ss_pred CCCc
Q 035902 313 KSTV 316 (381)
Q Consensus 313 ~p~~ 316 (381)
.+..
T Consensus 180 ~s~~ 183 (651)
T 3ces_A 180 FLDG 183 (651)
T ss_dssp TTCC
T ss_pred CccC
Confidence 7653
No 316
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.19 E-value=0.00029 Score=67.89 Aligned_cols=36 Identities=22% Similarity=0.390 Sum_probs=32.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHh-CCCCeEEEecCCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNN-LSVPNIILEREDC 37 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~-~g~~v~lie~~~~ 37 (381)
.++|++|||+|++|+.+|..|.+ .|.+|+|+|+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 45899999999999999999999 7999999998753
No 317
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.13 E-value=0.00036 Score=66.03 Aligned_cols=35 Identities=26% Similarity=0.528 Sum_probs=32.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDC 37 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~ 37 (381)
++|++|||+|++|+.+|..|.+.|.+|+|+|+...
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 58999999999999999999999999999998753
No 318
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.11 E-value=0.00033 Score=67.14 Aligned_cols=34 Identities=29% Similarity=0.512 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhC-CCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNL-SVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~-g~~v~lie~~~ 36 (381)
+||++|||||.||+.+|.+|.+. +.+|+|+|+..
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 48999999999999999999975 78999999876
No 319
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.08 E-value=0.0022 Score=61.72 Aligned_cols=34 Identities=29% Similarity=0.538 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+|+|||+|..|+.+|..+++.|.+|+++.+.+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~ 159 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEP 159 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3579999999999999999999999999999876
No 320
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.07 E-value=0.00015 Score=66.86 Aligned_cols=33 Identities=30% Similarity=0.397 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999875
No 321
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.05 E-value=0.00043 Score=66.67 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=32.1
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+|+|||||..|+-+|..|++.|.+|+++.+.+
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 5789999999999999999999999999999885
No 322
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.03 E-value=0.0025 Score=61.29 Aligned_cols=34 Identities=26% Similarity=0.412 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.-+++|||+|..|+++|..+++.|.+|.++.+.+
T Consensus 21 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~ 54 (641)
T 3cp8_A 21 MYDVIVVGAGHAGCEAALAVARGGLHCLLITSDL 54 (641)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEEecc
Confidence 3589999999999999999999999999999874
No 323
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=97.03 E-value=0.0031 Score=58.09 Aligned_cols=33 Identities=21% Similarity=0.286 Sum_probs=30.7
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
++++|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999864
No 324
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.01 E-value=0.0018 Score=59.20 Aligned_cols=32 Identities=28% Similarity=0.391 Sum_probs=30.8
Q ss_pred eEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 171 NVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 171 ~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
+|+|||+|++|+-+|..|++.|.+|+++.|.+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 79999999999999999999999999999877
No 325
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.99 E-value=0.0023 Score=58.33 Aligned_cols=33 Identities=27% Similarity=0.431 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.+|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999887
No 326
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.98 E-value=0.0014 Score=59.53 Aligned_cols=33 Identities=24% Similarity=0.457 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.+++|||+|.+|+.+|..|++.|.+|+++.+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 579999999999999999999999999999875
No 327
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.94 E-value=0.00035 Score=66.79 Aligned_cols=36 Identities=33% Similarity=0.445 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHh-CCCCeEEEecCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNN-LSVPNIILEREDCS 38 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~-~g~~v~lie~~~~~ 38 (381)
+||++|||||.||+.+|.+|.+ .+.+|+|+|+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5899999999999999999998 58999999987543
No 328
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.92 E-value=0.00044 Score=63.51 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=32.2
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..-+|+|||+|++|+-+|..|++.|.+|+++.|.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 35689999999999999999999999999999987
No 329
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.87 E-value=0.00097 Score=60.02 Aligned_cols=33 Identities=24% Similarity=0.397 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.+++|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999985
No 330
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.87 E-value=0.001 Score=63.05 Aligned_cols=33 Identities=21% Similarity=0.328 Sum_probs=31.3
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.+|+|||+|..|+-+|..|++.|.+|+++.+.+
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 479999999999999999999999999999886
No 331
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.86 E-value=0.0024 Score=61.27 Aligned_cols=33 Identities=33% Similarity=0.595 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+|+|||+|..|+.+|..+++.|.+|+++.+.+
T Consensus 122 ~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~ 154 (566)
T 1qo8_A 122 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP 154 (566)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 369999999999999999999999999999876
No 332
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.86 E-value=0.0015 Score=50.92 Aligned_cols=36 Identities=11% Similarity=0.090 Sum_probs=33.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
|.+.+++|+|+|..|...+..|.+.|.+|+++|+++
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 777899999999999999999999999999999863
No 333
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.85 E-value=0.0031 Score=55.98 Aligned_cols=33 Identities=18% Similarity=0.387 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.+|+|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999886
No 334
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.85 E-value=0.00076 Score=64.43 Aligned_cols=36 Identities=31% Similarity=0.410 Sum_probs=32.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhC-CCCeEEEecCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNL-SVPNIILEREDCS 38 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~-g~~v~lie~~~~~ 38 (381)
++|++|||+|++|+.+|..|.+. +.+|+|+|+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 48999999999999999999998 8999999987543
No 335
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=96.80 E-value=0.0036 Score=56.72 Aligned_cols=34 Identities=29% Similarity=0.398 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+++|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 3579999999999999999999999999999875
No 336
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.78 E-value=0.0079 Score=54.89 Aligned_cols=35 Identities=31% Similarity=0.406 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
...+|+|||+|++|+.+|..|++.|.+|+++.|.+
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 35689999999999999999999999999999986
No 337
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.74 E-value=0.0074 Score=56.92 Aligned_cols=33 Identities=12% Similarity=0.273 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNL--SVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~ 36 (381)
++|+|||+|.+|+.++..|++. +.+|+++-+..
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 6899999999999999999876 66899998875
No 338
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=96.66 E-value=0.0021 Score=61.37 Aligned_cols=33 Identities=33% Similarity=0.517 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.+++|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 17 ~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~ 49 (542)
T 1w4x_A 17 VDVLVVGAGFSGLYALYRLRELGRSVHVIETAG 49 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECccHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999876
No 339
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.65 E-value=0.00026 Score=66.88 Aligned_cols=35 Identities=29% Similarity=0.444 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
...+|+|||+|++|+-+|..|++.|.+|+++.|.+
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 45 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLP 45 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 34679999999999999999999999999999987
No 340
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.65 E-value=0.0059 Score=54.43 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhh---CCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSS---CGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~---~g~~v~~i~r~~ 202 (381)
.+|+|||+|.+|+-+|..|++ .|.+|+++.+.+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 379999999999999999999 899999999875
No 341
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=96.64 E-value=0.0062 Score=58.50 Aligned_cols=34 Identities=24% Similarity=0.530 Sum_probs=31.5
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+++|||+|..|+.+|..+++.|.+|+++.+.+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~ 159 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEP 159 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 4579999999999999999999999999999876
No 342
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=96.62 E-value=0.0036 Score=57.13 Aligned_cols=34 Identities=26% Similarity=0.525 Sum_probs=31.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHhh-CC-CeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSS-CG-ACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~-~g-~~v~~i~r~~ 202 (381)
..+|+|||+|.+|+.+|..|++ .| .+|+++.+.+
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 3579999999999999999999 99 8999999876
No 343
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=96.56 E-value=0.0012 Score=60.21 Aligned_cols=33 Identities=33% Similarity=0.431 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 379999999999999999999999999999987
No 344
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.52 E-value=0.00027 Score=66.79 Aligned_cols=34 Identities=32% Similarity=0.447 Sum_probs=32.0
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+|+|||+|++|+-+|..|++.|.+|+++.|.+
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~ 44 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLV 44 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4579999999999999999999999999999987
No 345
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=96.52 E-value=0.002 Score=61.44 Aligned_cols=33 Identities=39% Similarity=0.539 Sum_probs=31.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.+|+|||+|++|+-+|..|++.|.+|+++.|.+
T Consensus 6 ~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~ 38 (535)
T 3ihg_A 6 VDVLVVGAGLGGLSTAMFLARQGVRVLVVERRP 38 (535)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 579999999999999999999999999999987
No 346
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.50 E-value=0.0096 Score=58.44 Aligned_cols=34 Identities=12% Similarity=0.197 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4789999999999999999999999999999853
No 347
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=96.46 E-value=0.0014 Score=59.28 Aligned_cols=34 Identities=29% Similarity=0.440 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..++++|||+|.+|+-+|..|+ .|.+|+++.+.+
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 4678999999999999999999 599999999875
No 348
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=96.45 E-value=0.0045 Score=57.61 Aligned_cols=33 Identities=36% Similarity=0.525 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+|+|||+|+.|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999987
No 349
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=96.43 E-value=0.014 Score=55.07 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=31.1
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+|+|||+|..|+-+|..+++.|.+|.++.+.+
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~ 74 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGADVLVLERTS 74 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 469999999999999999999999999999877
No 350
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.36 E-value=0.0047 Score=47.19 Aligned_cols=33 Identities=12% Similarity=0.284 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+++|+|+|..|..+|..|.+.|.+|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 579999999999999999999999999999875
No 351
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.34 E-value=0.002 Score=60.77 Aligned_cols=33 Identities=18% Similarity=0.352 Sum_probs=30.3
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+++|||+|+.|+.+|..|++. .+|+++.+.+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~ 140 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERG 140 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTS
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCC
Confidence 35799999999999999999999 9999999876
No 352
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.31 E-value=0.0027 Score=60.42 Aligned_cols=34 Identities=18% Similarity=0.196 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHhh------------CCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSS------------CGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~------------~g~~v~~i~r~~ 202 (381)
..+|+|||||..|+-+|..|++ .|.+|+++.+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4689999999999999999999 899999999865
No 353
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.29 E-value=0.0042 Score=48.45 Aligned_cols=33 Identities=15% Similarity=0.320 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|+|+|..|..+|..|.+.|.+|+++|++.
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 679999999999999999999999999999875
No 354
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.28 E-value=0.0041 Score=47.30 Aligned_cols=33 Identities=15% Similarity=0.384 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|+|||+|..|...|..|.+.|.+|+++|++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 355
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.27 E-value=0.0057 Score=46.75 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|+|+|..|..+|..|.+.|.+|+++|++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 679999999999999999999999999999975
No 356
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.20 E-value=0.0082 Score=49.67 Aligned_cols=36 Identities=28% Similarity=0.389 Sum_probs=32.7
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEec
Q 035902 166 KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRG 201 (381)
Q Consensus 166 ~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~ 201 (381)
+..+++++|||||.+|...+..|.+.|.+|+++.+.
T Consensus 28 ~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 28 DLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred EcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 457899999999999999999999999999999754
No 357
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.96 E-value=0.0089 Score=45.57 Aligned_cols=33 Identities=12% Similarity=0.237 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|+|+|..|..+|..|.+.|.+|+++|++.
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 358
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.87 E-value=0.032 Score=53.05 Aligned_cols=32 Identities=28% Similarity=0.646 Sum_probs=30.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+|+|||+|..|+-+|..+++ |.+|.++.+.+
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~ 40 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGP 40 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSCEEEECSSC
T ss_pred CCEEEECccHHHHHHHHHHhc-CCcEEEEECCC
Confidence 479999999999999999999 99999999876
No 359
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=95.87 E-value=0.02 Score=53.53 Aligned_cols=31 Identities=16% Similarity=0.455 Sum_probs=29.2
Q ss_pred eEEEEcCCCCHHHHHHHHhhCCCeeEEEEec
Q 035902 171 NVLVVGCGNSGMEIAYDLSSCGACTSIVVRG 201 (381)
Q Consensus 171 ~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~ 201 (381)
+++|||+|..|+-+|..+++.|.+|.++.+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 4899999999999999999999999999986
No 360
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.84 E-value=0.057 Score=51.92 Aligned_cols=33 Identities=24% Similarity=0.479 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+|+|||+|..|+-+|..+++.|.+|.++.+.+
T Consensus 8 ~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~ 40 (588)
T 2wdq_A 8 FDAVVIGAGGAGMRAALQISQSGQTCALLSKVF 40 (588)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence 369999999999999999999999999999875
No 361
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.81 E-value=0.01 Score=47.53 Aligned_cols=33 Identities=21% Similarity=0.275 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhC-CCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNL-SVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~-g~~v~lie~~~ 36 (381)
.+|+|+|+|..|..+|..|.+. |.+|+++|++.
T Consensus 40 ~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 40 AQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 5799999999999999999999 99999999875
No 362
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.81 E-value=0.0075 Score=44.19 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC-CCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLS-VPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g-~~v~lie~~~ 36 (381)
++|+|+|+|..|..++..|.+.| .+|++++++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 67999999999999999999999 8999999874
No 363
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.76 E-value=0.0047 Score=52.75 Aligned_cols=32 Identities=19% Similarity=0.417 Sum_probs=30.5
Q ss_pred eEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 171 NVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 171 ~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.|+|||+|++|+-+|..|++.|.+|+++.+.+
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999876
No 364
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.71 E-value=0.013 Score=48.51 Aligned_cols=34 Identities=12% Similarity=0.118 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.++|+|||||..|...+..|.+.|.+|+|++++.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 4789999999999999999999999999998753
No 365
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.57 E-value=0.091 Score=50.63 Aligned_cols=33 Identities=18% Similarity=0.373 Sum_probs=30.5
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCC--CeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCG--ACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g--~~v~~i~r~~ 202 (381)
-+|+|||+|..|+-+|..|++.| .+|.++.+.+
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~ 40 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVY 40 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCC
Confidence 36999999999999999999999 8999999875
No 366
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=95.50 E-value=0.014 Score=51.82 Aligned_cols=35 Identities=31% Similarity=0.290 Sum_probs=31.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILERE 35 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~ 35 (381)
|+.++|+|||+|..|.+.|..|++.|.+|++++++
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 66678999999999999999999999999999985
No 367
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.47 E-value=0.013 Score=50.70 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
-++|.|||+|..|...|..+++.|++|+++|++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3689999999999999999999999999999875
No 368
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.43 E-value=0.014 Score=51.06 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|.|||+|..|...|..++..|++|+++|.++
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999864
No 369
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=95.31 E-value=0.034 Score=53.46 Aligned_cols=33 Identities=24% Similarity=0.443 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhhC------CCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSC------GACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~------g~~v~~i~r~~ 202 (381)
-+|+|||+|+.|+-+|..|++. |.+|.++.+.+
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~ 74 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAA 74 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCC
Confidence 4799999999999999999998 99999999886
No 370
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.25 E-value=0.017 Score=47.79 Aligned_cols=32 Identities=13% Similarity=0.285 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 5 PVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 5 ~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
+|+|+|+|..|...|..|.+.|.+|+++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999875
No 371
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=95.18 E-value=0.011 Score=57.64 Aligned_cols=33 Identities=36% Similarity=0.614 Sum_probs=31.2
Q ss_pred CeEEEEcCCCCHHHHHHHHhh-CCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSS-CGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~-~g~~v~~i~r~~ 202 (381)
-+|+|||+|++|+-+|..|++ .|.+|.++.+.+
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~ 66 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKE 66 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999 999999999887
No 372
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.13 E-value=0.02 Score=50.38 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|.|||+|..|...|..+++.|++|+++|+++
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 679999999999999999999999999999875
No 373
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.11 E-value=0.013 Score=50.09 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=31.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+.|+|||||..|...+..|.+.|.+|+||+++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4789999999999999999999999999999864
No 374
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.10 E-value=0.021 Score=52.88 Aligned_cols=37 Identities=22% Similarity=0.299 Sum_probs=33.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSA 39 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g 39 (381)
.++|+|||.|.+|+++|..|.++|.+|+++|......
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 4789999999999999999999999999999876544
No 375
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.07 E-value=0.043 Score=50.91 Aligned_cols=37 Identities=35% Similarity=0.420 Sum_probs=33.7
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 166 KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 166 ~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
++.++++.|||.|.+|+.+|..|.+.|.+|+...+++
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred hcCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 3468999999999999999999999999999998765
No 376
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=95.06 E-value=0.024 Score=50.97 Aligned_cols=37 Identities=8% Similarity=0.219 Sum_probs=32.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDCSA 39 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~~g 39 (381)
=++|+|||||..|..+++.+++.|++++++|.++...
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~ 37 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQAL 37 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 0679999999999999999999999999999876443
No 377
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.98 E-value=0.021 Score=50.42 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|+|||+|..|.+.|..|.+.|.+|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999864
No 378
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.89 E-value=0.052 Score=47.97 Aligned_cols=35 Identities=20% Similarity=0.103 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCCCHHH-HHHHHhhCCCeeEEEEecC
Q 035902 168 IGKNVLVVGCGNSGME-IAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e-~a~~l~~~g~~v~~i~r~~ 202 (381)
..+++.|||.|-+|+. +|..|.++|.+|+...+++
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3589999999999997 8899999999999998775
No 379
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.84 E-value=0.024 Score=49.82 Aligned_cols=33 Identities=36% Similarity=0.428 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|+|||+|..|.+.|..|.+.|.+|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 689999999999999999999999999999864
No 380
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=94.78 E-value=0.024 Score=52.68 Aligned_cols=33 Identities=18% Similarity=0.260 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|+|||.|.+|+++|..|+++|.+|++.|.+.
T Consensus 10 k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 789999999999999999999999999999864
No 381
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.76 E-value=0.024 Score=50.83 Aligned_cols=36 Identities=19% Similarity=0.259 Sum_probs=31.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
|+.++|+|||+|..|...|..|.+.|.+|++++++.
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 445789999999999999999999999999999864
No 382
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.63 E-value=0.042 Score=47.36 Aligned_cols=36 Identities=25% Similarity=0.286 Sum_probs=32.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
|+.++|+|.|+|..|..++..|.+.|.+|++++++.
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 666789999999999999999999999999999875
No 383
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.61 E-value=0.027 Score=52.15 Aligned_cols=35 Identities=23% Similarity=0.556 Sum_probs=31.6
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
|+ ++|.|||+|..|+..|..|++.|++|+++|++.
T Consensus 1 M~-mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 53 689999999999999999999999999999874
No 384
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=94.54 E-value=0.033 Score=48.98 Aligned_cols=36 Identities=11% Similarity=0.247 Sum_probs=31.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
|+..+|+|||+|..|.++|..|+..+. +++++|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 656789999999999999999999988 999999864
No 385
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.53 E-value=0.032 Score=48.54 Aligned_cols=33 Identities=21% Similarity=0.362 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|+|||+|..|.+.|..|.+.|.+|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 689999999999999999999999999999874
No 386
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.49 E-value=0.019 Score=51.88 Aligned_cols=32 Identities=34% Similarity=0.467 Sum_probs=30.5
Q ss_pred eEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 171 NVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 171 ~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.|+|||+|++|+-+|..|++.|.+|+++.|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 58999999999999999999999999999976
No 387
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.49 E-value=0.036 Score=51.75 Aligned_cols=36 Identities=17% Similarity=0.228 Sum_probs=32.2
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
|++++|.|||.|..|...|..|++.|.+|++++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 667899999999999999999999999999999874
No 388
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.49 E-value=0.033 Score=48.81 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=31.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCC-CeEEEecC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSV-PNIILERE 35 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~ 35 (381)
+..+|.|||+|..|..+|..|+..|. +++++|.+
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 34689999999999999999999999 99999986
No 389
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.48 E-value=0.032 Score=48.70 Aligned_cols=33 Identities=12% Similarity=0.319 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||+|..|...|..|++.|++|+++|++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 569999999999999999999999999999874
No 390
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.47 E-value=0.038 Score=48.63 Aligned_cols=40 Identities=23% Similarity=0.332 Sum_probs=29.8
Q ss_pred CCCCCCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 162 ENGGKFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 162 ~~~~~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.....+...+|.|||+|..|.-+|..|++.|.+|+++ +++
T Consensus 12 ~~~~~~~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 12 HENLYFQGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --------CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred chhhhccCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3344557889999999999999999999999999998 654
No 391
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.44 E-value=0.032 Score=49.12 Aligned_cols=36 Identities=14% Similarity=0.317 Sum_probs=32.1
Q ss_pred CCc-ccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 1 MEE-VPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 1 M~~-~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
|+. .+|+|||+|..|...|..|++.|+ +|+++|.+.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 643 689999999999999999999998 999999864
No 392
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.41 E-value=0.044 Score=49.04 Aligned_cols=34 Identities=26% Similarity=0.342 Sum_probs=31.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.++|.|||+|..|.+.|..|++.|.+|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3689999999999999999999999999999874
No 393
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.38 E-value=0.035 Score=49.64 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
++-+|+|+|||.+|+.+|..+...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34689999999999999999999999 899999874
No 394
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.37 E-value=0.035 Score=49.56 Aligned_cols=34 Identities=38% Similarity=0.558 Sum_probs=31.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCC-CeEEEecC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSV-PNIILERE 35 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~ 35 (381)
++.+|+|+|||.+|..+|..|...|. +++++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 35789999999999999999999998 79999987
No 395
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=94.35 E-value=0.041 Score=48.37 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=32.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
|+..+|+|||+|..|.++|..|+..+. +++++|.+.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 666789999999999999999999888 899999764
No 396
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.34 E-value=0.023 Score=52.46 Aligned_cols=34 Identities=18% Similarity=0.323 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.++|+|||+|+.|+-+|..|++.|.+|+++.+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4689999999999999999999999999999876
No 397
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=94.26 E-value=0.038 Score=42.83 Aligned_cols=37 Identities=32% Similarity=0.447 Sum_probs=33.1
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 166 KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 166 ~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
...+++++|+|+|.+|..++..|.+.|.+|+++.|++
T Consensus 16 ~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 16 KQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred ccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3467899999999999999999999999999998876
No 398
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=94.20 E-value=0.039 Score=49.83 Aligned_cols=33 Identities=24% Similarity=0.316 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|||+|.+|+.+|..+...|.+|+++|++.
T Consensus 191 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 191 AKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 579999999999999999999999999999875
No 399
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.15 E-value=0.039 Score=48.33 Aligned_cols=33 Identities=18% Similarity=0.262 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||+|..|...|..|.+.|.+|++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 579999999999999999999999999999864
No 400
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.14 E-value=0.053 Score=46.74 Aligned_cols=36 Identities=14% Similarity=0.123 Sum_probs=32.4
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCC---CeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSV---PNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~---~v~lie~~~ 36 (381)
|+.++|.|||+|..|.+.|..|.+.|+ +|+++|++.
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 666889999999999999999999998 899999875
No 401
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.12 E-value=0.021 Score=43.73 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=30.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|+|||+|..|...+..|.+.|.+|++++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 679999999999999999999998999999874
No 402
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.11 E-value=0.046 Score=48.12 Aligned_cols=36 Identities=17% Similarity=0.324 Sum_probs=31.0
Q ss_pred CCc-ccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 1 MEE-VPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 1 M~~-~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
|+. .+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 1 m~~~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 1 MAPKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 543 589999999999999999999998 899999764
No 403
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.08 E-value=0.042 Score=47.59 Aligned_cols=33 Identities=15% Similarity=0.330 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
+++|.|||+|..|...|..|+ .|++|+++|++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 378999999999999999999 999999999875
No 404
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=94.06 E-value=0.054 Score=50.54 Aligned_cols=34 Identities=12% Similarity=0.255 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
-++|.|||+|..|...|..+++.|++|+++|++.
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3689999999999999999999999999999875
No 405
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.05 E-value=0.058 Score=43.70 Aligned_cols=36 Identities=31% Similarity=0.374 Sum_probs=32.8
Q ss_pred CCcccEEEECC-CHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 1 MEEVPVVIVGA-GPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGa-G~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
|+.++|+|.|| |..|..++..|.++|.+|++++++.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 65578999999 9999999999999999999999875
No 406
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.01 E-value=0.058 Score=47.51 Aligned_cols=33 Identities=36% Similarity=0.555 Sum_probs=30.6
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.++.|||+|.+|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 579999999999999999999999999998865
No 407
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=93.93 E-value=0.053 Score=47.90 Aligned_cols=33 Identities=18% Similarity=0.314 Sum_probs=30.5
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
.+|+|||||..|...|..|+..|+ +|+++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 579999999999999999999998 999999874
No 408
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.90 E-value=0.046 Score=50.83 Aligned_cols=34 Identities=12% Similarity=0.269 Sum_probs=32.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhC-CC-CeEEEecCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNL-SV-PNIILEREDC 37 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~-g~-~v~lie~~~~ 37 (381)
++|.|||+|..|+..|..|++. |+ +|+++|++..
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 6799999999999999999999 99 9999998864
No 409
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.89 E-value=0.036 Score=50.36 Aligned_cols=33 Identities=27% Similarity=0.470 Sum_probs=31.0
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 379999999999999999999999999999876
No 410
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.87 E-value=0.034 Score=50.03 Aligned_cols=33 Identities=33% Similarity=0.450 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
++++|||+|..|+++|..+++.|.+|.++.+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 579999999999999999999999999999765
No 411
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=93.85 E-value=0.05 Score=47.33 Aligned_cols=35 Identities=9% Similarity=0.116 Sum_probs=32.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILEREDC 37 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~ 37 (381)
.++|.|||.|..|...|..|++.|++|+++|++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 36899999999999999999999999999998863
No 412
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=93.84 E-value=0.057 Score=44.27 Aligned_cols=34 Identities=18% Similarity=0.197 Sum_probs=31.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDC 37 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~ 37 (381)
++|.|||+|..|.+.|..|.+.|.+|++++++..
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 5799999999999999999999999999998753
No 413
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=93.84 E-value=0.052 Score=46.87 Aligned_cols=32 Identities=16% Similarity=0.094 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 5 PVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 5 ~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
+|.|||+|..|...|..|.+.|.+|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 59999999999999999999999999999875
No 414
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.83 E-value=0.058 Score=45.43 Aligned_cols=34 Identities=21% Similarity=0.393 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.++|.|||+|..|...|..|++.|.+|++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3789999999999999999999999999999875
No 415
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.81 E-value=0.045 Score=46.27 Aligned_cols=33 Identities=33% Similarity=0.417 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
.+|+|||+|-.|..+|..|++.|. +++|+|++.
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 689999999999999999999998 899999875
No 416
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=93.81 E-value=0.068 Score=46.85 Aligned_cols=33 Identities=21% Similarity=0.336 Sum_probs=29.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.++.|||+|.+|.-+|..|++.|.+|+++.|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999998864
No 417
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=93.81 E-value=0.049 Score=50.85 Aligned_cols=33 Identities=30% Similarity=0.650 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||+|..|+..|..|++.|.+|+++|++.
T Consensus 9 ~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 9 MNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 679999999999999999999999999999864
No 418
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.80 E-value=0.055 Score=46.04 Aligned_cols=37 Identities=19% Similarity=0.219 Sum_probs=32.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCC----CCeEEEecCCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLS----VPNIILEREDC 37 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g----~~v~lie~~~~ 37 (381)
|+.++|.|||+|..|...|..|.+.| .+|+++|++..
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 65678999999999999999999998 68999998763
No 419
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.73 E-value=0.054 Score=48.43 Aligned_cols=35 Identities=11% Similarity=0.205 Sum_probs=31.8
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
+.++|.|||.|..|...|..|++.|++|+++|++.
T Consensus 21 ~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 21 QSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34789999999999999999999999999999874
No 420
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=93.72 E-value=0.05 Score=48.70 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|||+|..|+.+|..+...|.+|+++|++.
T Consensus 185 ~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 185 ASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999875
No 421
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.63 E-value=0.067 Score=45.85 Aligned_cols=34 Identities=24% Similarity=0.284 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.++++|+|+|-+|.++|..|++.|.+|++++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3679999999999999999999999999998764
No 422
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.63 E-value=0.038 Score=45.76 Aligned_cols=33 Identities=30% Similarity=0.464 Sum_probs=30.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEE-EecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNII-LERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~l-ie~~~ 36 (381)
++|.|||+|..|...|..|.+.|.+|++ ++++.
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 6899999999999999999999999998 77764
No 423
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.61 E-value=0.058 Score=50.15 Aligned_cols=33 Identities=15% Similarity=0.360 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|.|||+|..|...|..|++.|++|+++|++.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 569999999999999999999999999999874
No 424
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.58 E-value=0.053 Score=46.91 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||.|..|...|..|++.|++|+++|++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 469999999999999999999999999999875
No 425
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=93.55 E-value=0.048 Score=48.85 Aligned_cols=34 Identities=32% Similarity=0.427 Sum_probs=31.2
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
..+++|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 3589999999999999999999999999999864
No 426
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=93.54 E-value=0.081 Score=46.87 Aligned_cols=36 Identities=19% Similarity=0.238 Sum_probs=31.1
Q ss_pred CCcccEEEECC-CHHHHHHHHHHHhCCC--CeEEEecCC
Q 035902 1 MEEVPVVIVGA-GPAGLATSACLNNLSV--PNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGa-G~aG~~~A~~l~~~g~--~v~lie~~~ 36 (381)
|...+|+|||+ |..|.++|+.+...|. +++++|.+.
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 44578999998 9999999999999885 899999753
No 427
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.54 E-value=0.039 Score=50.57 Aligned_cols=33 Identities=30% Similarity=0.430 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.+++|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 379999999999999999999999999999875
No 428
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.50 E-value=0.062 Score=47.52 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
.+|+|||+|..|..+|..|+..|+ +|+++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 579999999999999999999998 999999874
No 429
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.47 E-value=0.041 Score=49.74 Aligned_cols=33 Identities=36% Similarity=0.489 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+++|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999876
No 430
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.46 E-value=0.031 Score=50.18 Aligned_cols=33 Identities=15% Similarity=0.325 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+++|||+|.+|+.+|..|++.|.+|+++.+.+
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 369999999999999999999999999999876
No 431
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.45 E-value=0.065 Score=47.52 Aligned_cols=34 Identities=24% Similarity=0.350 Sum_probs=31.4
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
+.+|.|||+|..|...|..|.+.|.+|++++++.
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3789999999999999999999999999999864
No 432
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=93.44 E-value=0.063 Score=47.19 Aligned_cols=33 Identities=12% Similarity=0.281 Sum_probs=30.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV--PNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~ 36 (381)
++|+|||+|..|...|..|++.|. +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 579999999999999999999998 899999864
No 433
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=93.42 E-value=0.07 Score=49.21 Aligned_cols=33 Identities=24% Similarity=0.543 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|.|||+|..|...|..+++.|++|+++|++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 579999999999999999999999999999875
No 434
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.42 E-value=0.063 Score=46.96 Aligned_cols=34 Identities=24% Similarity=0.394 Sum_probs=30.3
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
+.++|+|||+|..|.+.|..|. .|.+|++++++.
T Consensus 1 M~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 1 MSLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 0378999999999999999999 999999999875
No 435
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.41 E-value=0.099 Score=43.01 Aligned_cols=33 Identities=18% Similarity=0.175 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||+|..|...|..|.+.|.+|++++++.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999874
No 436
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=93.37 E-value=0.091 Score=49.01 Aligned_cols=36 Identities=17% Similarity=0.194 Sum_probs=32.9
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
|+..+|.|||+|..|...|..|++.|.+|++++++.
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 655789999999999999999999999999999864
No 437
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.34 E-value=0.074 Score=46.55 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
.+|+|||+|..|..+|..|+..|. +++++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 679999999999999999999986 899998764
No 438
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.33 E-value=0.075 Score=46.68 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=30.2
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV--PNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~ 36 (381)
..+|+|||+|..|.++|..|+..+. +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999987 899999764
No 439
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.33 E-value=0.069 Score=46.62 Aligned_cols=32 Identities=22% Similarity=0.357 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHhCCC--CeEEEecCC
Q 035902 5 PVVIVGAGPAGLATSACLNNLSV--PNIILERED 36 (381)
Q Consensus 5 ~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~ 36 (381)
+|+|||+|..|.+.|..|+..|. +++++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 59999999999999999999998 899999864
No 440
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=93.31 E-value=0.078 Score=45.18 Aligned_cols=33 Identities=24% Similarity=0.344 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++++|||+|-+|.+++..|.+.|.+|+|++|+.
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999998899998875
No 441
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=93.29 E-value=0.042 Score=49.15 Aligned_cols=37 Identities=24% Similarity=0.215 Sum_probs=32.1
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCC-------CCeEEEecCCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLS-------VPNIILEREDC 37 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g-------~~v~lie~~~~ 37 (381)
|..++|.|||+|..|.+.|..|++.| .+|++++++..
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 44468999999999999999999998 89999998763
No 442
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=93.26 E-value=0.096 Score=47.81 Aligned_cols=33 Identities=27% Similarity=0.408 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|||.|..|..+|..|.+.|.+|++||++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 579999999999999999999999999999874
No 443
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.22 E-value=0.07 Score=46.72 Aligned_cols=33 Identities=24% Similarity=0.189 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||.|..|...|..|++.|++|+++|++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 579999999999999999999999999999875
No 444
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=93.15 E-value=0.072 Score=46.77 Aligned_cols=35 Identities=26% Similarity=0.431 Sum_probs=30.1
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLSV--PNIILERED 36 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~ 36 (381)
+..+|+|||+|..|.++|..|+..+. ++.++|.+.
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999998885 799998653
No 445
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.14 E-value=0.11 Score=48.47 Aligned_cols=36 Identities=11% Similarity=0.151 Sum_probs=32.5
Q ss_pred CCcccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 1 MEEVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
|...+|.|||.|..|...|..|++.|++|+++|++.
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 445789999999999999999999999999999875
No 446
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.12 E-value=0.046 Score=51.33 Aligned_cols=35 Identities=29% Similarity=0.511 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
...+++|||+|.+|+.+|..|++.|.+|+++.+++
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 36789999999999999999999999999999875
No 447
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.11 E-value=0.074 Score=49.01 Aligned_cols=34 Identities=21% Similarity=0.597 Sum_probs=31.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILEREDC 37 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~~ 37 (381)
.++.|||.|..|+..|..|++.|++|+++|++..
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6899999999999999999999999999998864
No 448
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=93.09 E-value=0.049 Score=49.23 Aligned_cols=33 Identities=27% Similarity=0.424 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhC--CCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSC--GACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~--g~~v~~i~r~~ 202 (381)
.+|+|||+|+.|+.+|..|++. |.+|+++.+.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 3699999999999999999999 99999999876
No 449
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.05 E-value=0.083 Score=47.36 Aligned_cols=33 Identities=24% Similarity=0.283 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|+|+|.+|..++..+...|.+|+++|++.
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 679999999999999999999999999999875
No 450
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.04 E-value=0.12 Score=45.40 Aligned_cols=33 Identities=15% Similarity=0.203 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|.|||+|..|...|..|.+.|.+|+++|++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 679999999999999999999999999999875
No 451
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.02 E-value=0.047 Score=50.69 Aligned_cols=33 Identities=21% Similarity=0.378 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|+|+|+|-.|...|..|...|.+|++||+++
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 679999999999999999999999999999874
No 452
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=93.01 E-value=0.053 Score=50.54 Aligned_cols=33 Identities=30% Similarity=0.483 Sum_probs=30.9
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCC--eeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGA--CTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~--~v~~i~r~~ 202 (381)
++|+|||+|.+|+-+|..|++.|. +|+++.+++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 589999999999999999999998 999999865
No 453
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.98 E-value=0.085 Score=45.99 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||.|..|...|..|++.|++|+++|++.
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 679999999999999999999999999999875
No 454
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.97 E-value=0.09 Score=46.31 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=30.9
Q ss_pred CcccEEEECCCHHHHHHHHHHHhCC----CCeEEEecCC
Q 035902 2 EEVPVVIVGAGPAGLATSACLNNLS----VPNIILERED 36 (381)
Q Consensus 2 ~~~~vvIIGaG~aG~~~A~~l~~~g----~~v~lie~~~ 36 (381)
+.++|.|||+|..|...|..|.+.| .+|++++++.
T Consensus 21 ~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 21 QSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp -CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 3468999999999999999999999 7899999875
No 455
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.92 E-value=0.096 Score=48.57 Aligned_cols=34 Identities=15% Similarity=0.086 Sum_probs=31.6
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.++|+|||+|..|...+..|.+.|.+|++++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4789999999999999999999999999999864
No 456
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.92 E-value=0.074 Score=48.74 Aligned_cols=33 Identities=12% Similarity=0.205 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|||.|+.|+.+|..+++.|++|+.+|-+.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 579999999999999999999999999999764
No 457
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.89 E-value=0.093 Score=46.30 Aligned_cols=33 Identities=12% Similarity=0.059 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHH-HHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLA-TSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~-~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||.|.+|++ +|..|.++|.+|++.|...
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 57999999999996 7888999999999999875
No 458
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=92.88 E-value=0.063 Score=49.03 Aligned_cols=34 Identities=21% Similarity=0.431 Sum_probs=31.8
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCe-eEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGAC-TSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~-v~~i~r~~ 202 (381)
..+|+|||+|++|+-+|..|++.|.+ |+++.|.+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~ 38 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSS 38 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 35899999999999999999999999 99999987
No 459
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=92.87 E-value=0.096 Score=45.51 Aligned_cols=34 Identities=15% Similarity=0.144 Sum_probs=30.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
.++++|||+|.+|..+|..|.+.|. +|+|++++.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3679999999999999999999998 899998874
No 460
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=92.87 E-value=0.084 Score=48.01 Aligned_cols=33 Identities=30% Similarity=0.444 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|||+|.+|+.++..+...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 173 AKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 679999999999999999999999999999875
No 461
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.82 E-value=0.095 Score=46.14 Aligned_cols=34 Identities=24% Similarity=0.341 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
..+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 3689999999999999999999998 799999865
No 462
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=92.78 E-value=0.08 Score=46.12 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||.|..|...|..|.+.|++|+++|++.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999999874
No 463
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=92.74 E-value=0.093 Score=47.49 Aligned_cols=33 Identities=24% Similarity=0.347 Sum_probs=30.6
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|||+|.+|+.++..+...|.+|+++|++.
T Consensus 173 ~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 173 ARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 679999999999999999999999999999864
No 464
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.72 E-value=0.066 Score=49.30 Aligned_cols=34 Identities=26% Similarity=0.437 Sum_probs=31.6
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCC-eeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGA-CTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~-~v~~i~r~~ 202 (381)
..+|+|||+|..|+-+|..|++.|. +|+++.+.+
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 3579999999999999999999999 999999876
No 465
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=92.72 E-value=0.083 Score=45.10 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=33.2
Q ss_pred CCCCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 166 KFIGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 166 ~~~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
+..+++++|||+|.+|...+..|.+.|.+|+++....
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 3468999999999999999999999999999998643
No 466
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=92.71 E-value=0.088 Score=46.32 Aligned_cols=33 Identities=21% Similarity=0.365 Sum_probs=30.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV--PNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~ 36 (381)
.+|+|||+|..|.++|..|+..+. +++++|.+.
T Consensus 6 ~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 6 NKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 689999999999999999999887 899999754
No 467
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=92.71 E-value=0.09 Score=45.42 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=30.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||.|..|...|..|.+.|++|+++|++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 469999999999999999999999999999875
No 468
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=92.67 E-value=0.14 Score=44.63 Aligned_cols=33 Identities=21% Similarity=0.282 Sum_probs=31.2
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||.|..|...|..|++.|++|+++|++.
T Consensus 10 ~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 10 FDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 689999999999999999999999999999875
No 469
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.64 E-value=0.086 Score=45.48 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
..+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 3689999999999999999999998 899999875
No 470
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.63 E-value=0.073 Score=49.58 Aligned_cols=36 Identities=19% Similarity=0.380 Sum_probs=32.0
Q ss_pred CCc-ccEEEECCCHHHHHHHHHHHhC--CCCeEEEecCC
Q 035902 1 MEE-VPVVIVGAGPAGLATSACLNNL--SVPNIILERED 36 (381)
Q Consensus 1 M~~-~~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~ 36 (381)
|++ ++|.|||.|..|...|..|++. |.+|+++|++.
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 543 6899999999999999999999 78999999864
No 471
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.61 E-value=0.12 Score=43.06 Aligned_cols=34 Identities=24% Similarity=0.320 Sum_probs=31.4
Q ss_pred cccEEEECC-CHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGA-GPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGa-G~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.++|+|.|| |..|..++..|+++|.+|++++++.
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 478999999 9999999999999999999999875
No 472
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.58 E-value=0.1 Score=40.18 Aligned_cols=34 Identities=15% Similarity=0.284 Sum_probs=31.4
Q ss_pred CCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 169 GKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 169 ~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
.++++|+|+|.+|..++..|.+.|.+|+++.+.+
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5789999999999999999999999999999864
No 473
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.57 E-value=0.076 Score=47.81 Aligned_cols=34 Identities=26% Similarity=0.383 Sum_probs=32.1
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEec
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRG 201 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~ 201 (381)
...+|+|||+|.+|+-+|..|.+.|.+|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4679999999999999999999999999999988
No 474
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=92.57 E-value=0.058 Score=48.04 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=29.9
Q ss_pred eEEEEcCCCCHHHHHHHHhhCC------CeeEEEEecC
Q 035902 171 NVLVVGCGNSGMEIAYDLSSCG------ACTSIVVRGP 202 (381)
Q Consensus 171 ~v~viG~G~~~~e~a~~l~~~g------~~v~~i~r~~ 202 (381)
+|+|||+|.+|+-+|..|++.| .+|+++.+..
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 6899999999999999999998 8999999875
No 475
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.55 E-value=0.12 Score=44.30 Aligned_cols=33 Identities=21% Similarity=0.246 Sum_probs=30.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
++++|||+|-+|.++|..|.+.|. +|+|++|+.
T Consensus 118 k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 689999999999999999999998 899999875
No 476
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.55 E-value=0.064 Score=50.50 Aligned_cols=43 Identities=14% Similarity=0.312 Sum_probs=34.6
Q ss_pred hhhhhhcCCCeEEccC--cceEeCC--eEEEcCCcEeeccEEEEecC
Q 035902 269 GAMDKIRKGEIQVFPS--ITSINRN--EVEFENGKIEEFEAIIFATG 311 (381)
Q Consensus 269 ~~~~~~~~~~v~~~~~--v~~v~~~--~v~~~~g~~~~~D~vi~a~G 311 (381)
.+.+.+.+.+++++.+ |+++..+ .+++.+|+++.+|.||.++.
T Consensus 227 ~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 227 AVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHTSCGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSC
T ss_pred HHHHHHHhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCC
Confidence 4455567778898887 8888764 68889999999999998864
No 477
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.53 E-value=0.091 Score=45.96 Aligned_cols=33 Identities=18% Similarity=0.294 Sum_probs=29.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC--CCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLS--VPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g--~~v~lie~~~ 36 (381)
++|+|||+|..|.+.|..|++.| .+|+++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 46999999999999999999998 6899999864
No 478
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=92.52 E-value=0.081 Score=48.81 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 5 PVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 5 ~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
+|.|||+|..|...|..|++.|.+|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 59999999999999999999999999999864
No 479
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=92.49 E-value=0.073 Score=48.78 Aligned_cols=35 Identities=20% Similarity=0.386 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCC-CeeEEEEecC
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCG-ACTSIVVRGP 202 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g-~~v~~i~r~~ 202 (381)
...+++|||+|.+|+-+|..|++.| .+|+++.+++
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 3568999999999999999999999 8999999865
No 480
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.47 E-value=0.093 Score=44.96 Aligned_cols=34 Identities=24% Similarity=0.176 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.++++|+|+|-+|.++|..|.+.|.+|++++++.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3679999999999999999999999999999874
No 481
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=92.43 E-value=0.12 Score=44.48 Aligned_cols=33 Identities=18% Similarity=0.067 Sum_probs=31.1
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|+|.|||..|..++..|.++|.+|+++.++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 679999999999999999999999999999875
No 482
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=92.41 E-value=0.12 Score=46.51 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
.+|+|+|+|..|..+|..++..|.+|+++|++.
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 679999999999999999999999999999874
No 483
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.37 E-value=0.1 Score=47.67 Aligned_cols=32 Identities=19% Similarity=0.356 Sum_probs=29.7
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||.|..|+..|..|++ |.+|+++|++.
T Consensus 37 mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 579999999999999999998 99999999875
No 484
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.34 E-value=0.075 Score=47.75 Aligned_cols=32 Identities=19% Similarity=0.291 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 5 PVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 5 ~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
+|.|||+|..|...|..|.+.|.+|++++++.
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 485
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=92.34 E-value=0.13 Score=45.05 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=30.8
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV--PNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~ 36 (381)
++|.|||.|..|.+.|..|.+.|. +|+++|++.
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 679999999999999999999999 899999875
No 486
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.32 E-value=0.15 Score=47.71 Aligned_cols=34 Identities=9% Similarity=0.061 Sum_probs=31.8
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
..+|.|||.|..|...|..|++.|++|++++++.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3789999999999999999999999999999875
No 487
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.26 E-value=0.089 Score=49.25 Aligned_cols=35 Identities=23% Similarity=0.414 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 168 IGKNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 168 ~~~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
...+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 35789999999999999999999999999998765
No 488
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=92.26 E-value=0.11 Score=45.65 Aligned_cols=33 Identities=12% Similarity=0.140 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCC-CCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLS-VPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g-~~v~lie~~~ 36 (381)
++|.|||.|..|...|..|++.| .+|+++|++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999875
No 489
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=92.25 E-value=0.11 Score=45.68 Aligned_cols=33 Identities=18% Similarity=0.297 Sum_probs=31.0
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||.|..|...|..|++.|++|+++|++.
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 579999999999999999999999999999875
No 490
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=92.25 E-value=0.12 Score=45.17 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHHhC--CCCeEEEecCC
Q 035902 5 PVVIVGAGPAGLATSACLNNL--SVPNIILERED 36 (381)
Q Consensus 5 ~vvIIGaG~aG~~~A~~l~~~--g~~v~lie~~~ 36 (381)
+|+|||+|..|...|..|++. +.+|+++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 599999999999999999985 67999999874
No 491
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.25 E-value=0.13 Score=46.44 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=31.1
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
..+|+|||+|..|..+|..+...|.+|+++|++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3679999999999999999999999999999874
No 492
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=92.21 E-value=0.22 Score=46.67 Aligned_cols=56 Identities=4% Similarity=0.025 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHhCCccccccEEEEEEEeCCCCeEE-EEEeecCCCceEEEEeCEEEEccCCC
Q 035902 77 ISFINYVDNYVSQMGINPRYHRSVESASYDENAKAWI-IVAKNTALDAYEEYVARYLVVATGEN 139 (381)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~d~vIlAtG~~ 139 (381)
..+.+.+.+.+++.|.+++++++|++|..++ +..+ |++.++ +++.||.||.+++..
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g-----~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTG--NKIEAVHLEDG-----RRFLTQAVASNADVV 277 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTS-----CEEECSCEEECCC--
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeC--CeEEEEEecCC-----cEEEcCEEEECCCHH
Confidence 4577788888888999999999999999876 4443 777777 789999999998876
No 493
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.20 E-value=0.13 Score=41.98 Aligned_cols=32 Identities=22% Similarity=0.349 Sum_probs=29.6
Q ss_pred cEEEEC-CCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 5 PVVIVG-AGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 5 ~vvIIG-aG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
+|+||| +|..|...|..|.+.|.+|++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 599999 99999999999999999999999864
No 494
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=92.15 E-value=0.15 Score=43.94 Aligned_cols=34 Identities=29% Similarity=0.260 Sum_probs=30.5
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
.++++|+|+|-+|.+++..|++.|. +|+|++|+.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 3689999999999999999999998 699998874
No 495
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.12 E-value=0.16 Score=44.42 Aligned_cols=34 Identities=29% Similarity=0.242 Sum_probs=30.7
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
.++++|+|+|-+|.++|..|++.|. +|+|++|+.
T Consensus 154 gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 3689999999999999999999998 799999873
No 496
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.11 E-value=0.11 Score=43.85 Aligned_cols=34 Identities=24% Similarity=0.461 Sum_probs=30.9
Q ss_pred cccEEEECCCHHHHHHHHHHHhCCC-CeEEEecCC
Q 035902 3 EVPVVIVGAGPAGLATSACLNNLSV-PNIILERED 36 (381)
Q Consensus 3 ~~~vvIIGaG~aG~~~A~~l~~~g~-~v~lie~~~ 36 (381)
..+|+|||+|-.|..+|..|++.|. +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 3689999999999999999999998 789999864
No 497
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=92.10 E-value=0.073 Score=50.08 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.8
Q ss_pred CeEEEEcCCCCHHHHHHHHhhCCCeeEEEEecC
Q 035902 170 KNVLVVGCGNSGMEIAYDLSSCGACTSIVVRGP 202 (381)
Q Consensus 170 ~~v~viG~G~~~~e~a~~l~~~g~~v~~i~r~~ 202 (381)
-+++|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 4 KDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 479999999999999999999999999999865
No 498
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=92.09 E-value=0.17 Score=44.82 Aligned_cols=36 Identities=28% Similarity=0.314 Sum_probs=31.1
Q ss_pred CCcccEEEECC-CHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 1 MEEVPVVIVGA-GPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 1 M~~~~vvIIGa-G~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
|+.++|+|.|| |..|..++..|.+.|.+|+++.++.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 44468999999 9999999999999999999999875
No 499
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.07 E-value=0.14 Score=44.06 Aligned_cols=33 Identities=21% Similarity=0.162 Sum_probs=29.9
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCC--CeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSV--PNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~--~v~lie~~~ 36 (381)
++|.|||+|..|...|..|.+.|. +|+++|++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 469999999999999999999998 899999864
No 500
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=92.05 E-value=0.13 Score=44.38 Aligned_cols=32 Identities=22% Similarity=0.433 Sum_probs=29.4
Q ss_pred ccEEEECCCHHHHHHHHHHHhCCCCeEEEecCC
Q 035902 4 VPVVIVGAGPAGLATSACLNNLSVPNIILERED 36 (381)
Q Consensus 4 ~~vvIIGaG~aG~~~A~~l~~~g~~v~lie~~~ 36 (381)
++|.|||+|..|...|..|.+ |.+|+++|++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 469999999999999999999 99999999875
Done!