Your job contains 1 sequence.
>035907
MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD
VDLKEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKNLGSLLSS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035907
(105 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-030131-4343 - symbol:rpl27 "ribosomal prote... 139 9.3e-20 2
RGD|1563835 - symbol:RGD1563835 "similar to ribosomal pro... 126 1.7e-18 2
SGD|S000001052 - symbol:RPL27A "Ribosomal 60S subunit pro... 118 3.4e-18 2
SGD|S000002879 - symbol:RPL27B "Ribosomal 60S subunit pro... 118 3.4e-18 2
TAIR|locus:2090434 - symbol:AT3G22230 species:3702 "Arabi... 214 1.6e-17 1
POMBASE|SPBC685.07c - symbol:rpl2701 "60S ribosomal prote... 115 1.8e-17 2
TAIR|locus:2129575 - symbol:AT4G15000 species:3702 "Arabi... 213 2.0e-17 1
POMBASE|SPCC74.05 - symbol:rpl2702 "60S ribosomal protein... 113 6.0e-17 2
UNIPROTKB|G4ML54 - symbol:MGG_06693 "60S ribosomal protei... 114 6.6e-16 2
FB|FBgn0039359 - symbol:RpL27 "Ribosomal protein L27" spe... 130 8.4e-16 2
TAIR|locus:2045467 - symbol:AT2G32220 species:3702 "Arabi... 193 2.6e-15 1
ASPGD|ASPL0000016741 - symbol:AN4222 species:162425 "Emer... 112 2.4e-14 2
GENEDB_PFALCIPARUM|PF14_0579 - symbol:PF14_0579 "ribosoma... 126 6.2e-14 2
UNIPROTKB|Q8IKM5 - symbol:PF14_0579 "60S ribosomal protei... 126 6.2e-14 2
RGD|1560069 - symbol:RGD1560069 "similar to ribosomal pro... 116 4.2e-13 2
UNIPROTKB|D4A7I3 - symbol:D4A7I3 "Uncharacterized protein... 117 1.4e-12 2
UNIPROTKB|F1MSX2 - symbol:F1MSX2 "Uncharacterized protein... 89 3.9e-11 2
DICTYBASE|DDB_G0271298 - symbol:rpl27 "S60 ribosomal prot... 143 5.2e-10 1
RGD|1585224 - symbol:Rpl27-l1 "ribosomal protein L27-like... 140 1.1e-09 1
UNIPROTKB|Q9XSU7 - symbol:RPL27 "60S ribosomal protein L2... 139 1.4e-09 1
UNIPROTKB|P61355 - symbol:RPL27 "60S ribosomal protein L2... 139 1.4e-09 1
UNIPROTKB|P61356 - symbol:RPL27 "60S ribosomal protein L2... 139 1.4e-09 1
UNIPROTKB|F2Z4N3 - symbol:RPL27 "60S ribosomal protein L2... 139 1.4e-09 1
UNIPROTKB|P61353 - symbol:RPL27 "60S ribosomal protein L2... 139 1.4e-09 1
UNIPROTKB|A1XQU5 - symbol:RPL27 "60S ribosomal protein L2... 139 1.4e-09 1
RGD|621192 - symbol:Rpl27 "ribosomal protein L27" species... 139 1.4e-09 1
RGD|1565900 - symbol:RGD1565900 "similar to ribosomal pro... 133 5.9e-09 1
UNIPROTKB|I3LIX1 - symbol:RPL27 "60S ribosomal protein L2... 127 2.6e-08 1
UNIPROTKB|D3ZZV8 - symbol:D3ZZV8 "Uncharacterized protein... 124 5.3e-08 1
UNIPROTKB|E2QVG7 - symbol:RPL27 "Uncharacterized protein"... 122 8.7e-08 1
RGD|1587075 - symbol:LOC680808 "hypothetical protein LOC6... 76 9.8e-08 2
UNIPROTKB|E2R202 - symbol:E2R202 "Uncharacterized protein... 118 2.3e-07 1
WB|WBGene00004441 - symbol:rpl-27 species:6239 "Caenorhab... 117 2.9e-07 1
UNIPROTKB|K7ELC7 - symbol:RPL27 "60S ribosomal protein L2... 111 1.3e-06 1
UNIPROTKB|K7EQQ9 - symbol:RPL27 "60S ribosomal protein L2... 111 1.3e-06 1
RGD|1561870 - symbol:RGD1561870 "similar to ribosomal pro... 92 0.00013 1
>ZFIN|ZDB-GENE-030131-4343 [details] [associations]
symbol:rpl27 "ribosomal protein L27" species:7955
"Danio rerio" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 ZFIN:ZDB-GENE-030131-4343
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 CTD:6155 HOVERGEN:HBG050005
OrthoDB:EOG48SGVG EMBL:BC045965 IPI:IPI00490551 RefSeq:NP_956018.1
UniGene:Dr.75716 ProteinModelPortal:Q7ZV82 STRING:Q7ZV82
PRIDE:Q7ZV82 Ensembl:ENSDART00000020311 Ensembl:ENSDART00000140518
GeneID:325618 KEGG:dre:325618 InParanoid:Q7ZV82 NextBio:20809388
Bgee:Q7ZV82 Uniprot:Q7ZV82
Length = 136
Score = 139 (54.0 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
M F+KP K V++L GR A RKAVI+K+ DDGT +RP H LVA I Y
Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRY 49
Score = 110 (43.8 bits), Expect = 9.3e-20, Sum P(2) = 9.3e-20
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 73 KVFNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 127
>RGD|1563835 [details] [associations]
symbol:RGD1563835 "similar to ribosomal protein L27"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 RGD:1563835 Pfam:PF00467 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR10497 OMA:HRCARTA
GeneTree:ENSGT00390000010721 IPI:IPI00389219 RefSeq:XP_001069148.1
RefSeq:XP_573288.1 PRIDE:D3ZTK5 Ensembl:ENSRNOT00000042756
GeneID:498085 KEGG:rno:498085 UCSC:RGD:1563835 CTD:498085
OrthoDB:EOG4SQWZS NextBio:698627 Uniprot:D3ZTK5
Length = 135
Score = 126 (49.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
M F+KP K V++L GR + KAVI+K+ DDGT +RP H LVA I Y
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGYKAVIVKNIDDGTSDRPYSHVLVAGIDCY 49
Score = 111 (44.1 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 72 KVYNYSHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 126
>SGD|S000001052 [details] [associations]
symbol:RPL27A "Ribosomal 60S subunit protein L27A"
species:4932 "Saccharomyces cerevisiae" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=TAS]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 SGD:S000001052 EMBL:BK006934 GO:GO:0003735
GO:GO:0002181 EMBL:U10400 PDB:4B6A PDBsum:4B6A Gene3D:2.30.30.30
InterPro:IPR014722 GO:GO:0022625 PDB:3IZS PDB:3U5E PDB:3U5I
PDBsum:3IZS PDBsum:3U5E PDBsum:3U5I HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 OMA:FNYNHLM OrthoDB:EOG496328 PIR:S46790
RefSeq:NP_011874.1 ProteinModelPortal:P0C2H6 SMR:P0C2H6
MINT:MINT-1325160 STRING:P0C2H6 EnsemblFungi:YHR010W GeneID:856401
KEGG:sce:YHR010W GeneTree:ENSGT00390000010721 NextBio:981934
Genevestigator:P0C2H6 GermOnline:YHR010W Uniprot:P0C2H6
Length = 136
Score = 118 (46.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
M FLK K ++++GR A +K VI+K D+G++ P GH LVA I+ Y
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERY 49
Score = 116 (45.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 45 RIKNYQHLMPTCYTLDVD-LKEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HL+PT YTLDV+ K VV+T + + ++ A + KK EE+ + GKN
Sbjct: 73 KVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKN 127
>SGD|S000002879 [details] [associations]
symbol:RPL27B "Ribosomal 60S subunit protein L27B"
species:4932 "Saccharomyces cerevisiae" [GO:0005622 "intracellular"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA;TAS] [GO:0005840 "ribosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0002181
"cytoplasmic translation" evidence=TAS] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=TAS] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
SGD:S000002879 EMBL:BK006938 GO:GO:0003735 GO:GO:0002181
Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:U33050 GO:GO:0022625
eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497
OMA:GTSEKQY OrthoDB:EOG496328 GeneTree:ENSGT00390000010721
PIR:S69638 RefSeq:NP_010759.1 ProteinModelPortal:P0C2H7 SMR:P0C2H7
STRING:P0C2H7 PaxDb:P0C2H7 EnsemblFungi:YDR471W GeneID:852082
KEGG:sce:YDR471W NextBio:970394 Genevestigator:P0C2H7
Uniprot:P0C2H7
Length = 136
Score = 118 (46.6 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
M FLK K ++++GR A +K VI+K D+G++ P GH LVA I+ Y
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERY 49
Score = 116 (45.9 bits), Expect = 3.4e-18, Sum P(2) = 3.4e-18
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 45 RIKNYQHLMPTCYTLDVD-LKEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HL+PT YTLDV+ K VV+T + + ++ A + KK EE+ + GKN
Sbjct: 73 KVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKN 127
>TAIR|locus:2090434 [details] [associations]
symbol:AT3G22230 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS] [GO:0006412
"translation" evidence=IEA;ISS] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0022626 "cytosolic ribosome" evidence=IDA]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777
ProDom:PD009396 PROSITE:PS01107 EnsemblPlants:AT3G22230.1
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 EMBL:AP001306 GO:GO:0022625
eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901
ProtClustDB:CLSN2683281 PANTHER:PTHR10497 EMBL:AY062617
EMBL:AY063860 EMBL:AY091218 EMBL:AY093389 EMBL:AY136321
EMBL:BT000418 EMBL:AY086536 IPI:IPI00521771 RefSeq:NP_188862.1
UniGene:At.5917 UniGene:At.71423 UniGene:At.72236
ProteinModelPortal:Q8LCL3 SMR:Q8LCL3 STRING:Q8LCL3 PaxDb:Q8LCL3
PRIDE:Q8LCL3 GeneID:821787 KEGG:ath:AT3G22230 GeneFarm:260
TAIR:At3g22230 InParanoid:Q8LCL3 OMA:FNYNHLM PhylomeDB:Q8LCL3
Genevestigator:Q8LCL3 GermOnline:AT3G22230 Uniprot:Q8LCL3
Length = 135
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 46/86 (53%), Positives = 57/86 (66%)
Query: 13 LLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLDVDLKEVVTTNSL 72
L+ G VI K T ++ C + ++ NYQHLMPT YTLDVDLKEV T ++L
Sbjct: 42 LVAGLKKYPSKVIRKDSAKKTAKKSRVKCFI-KLVNYQHLMPTRYTLDVDLKEVATLDAL 100
Query: 73 QSKDKKVTACEETKKHLEEKFKTGKN 98
+SKDKKVTA +E K LEE+FKTGKN
Sbjct: 101 KSKDKKVTALKEAKAKLEERFKTGKN 126
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 36/49 (73%), Positives = 40/49 (81%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
MV FLK NKAVILLQGR A +KAVI+KSFDDGT +R GHCLVA +K Y
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKY 49
>POMBASE|SPBC685.07c [details] [associations]
symbol:rpl2701 "60S ribosomal protein L27" species:4896
"Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic translation"
evidence=NAS] [GO:0003735 "structural constituent of ribosome"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006412 "translation" evidence=ISO]
[GO:0022625 "cytosolic large ribosomal subunit" evidence=ISO]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 PomBase:SPBC685.07c Pfam:PF00467 GO:GO:0005634
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003735 GO:GO:0002181
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 EMBL:U97385 EMBL:AB015354 PIR:T40638 PIR:T43374
RefSeq:NP_596141.1 STRING:O14388 PRIDE:O14388
EnsemblFungi:SPBC685.07c.1 GeneID:2541156 KEGG:spo:SPBC685.07c
OMA:GTSEKQY OrthoDB:EOG496328 NextBio:20802269 Uniprot:O14388
Length = 136
Score = 115 (45.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
MV LKP K ++ +GR A +K VI+++ D G++ P GH +VA ++ Y
Sbjct: 1 MVKILKPGKVALITRGRFAGKKVVILQAIDQGSKSHPFGHAVVAGVERY 49
Score = 112 (44.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 45 RIKNYQHLMPTCYTLDVD-LKEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y L++D LK ++T ++ + ++ A + KK EEK+++GK+
Sbjct: 73 KVVNYNHLMPTRYALELDNLKGLITADTFKEPTQRSAARKTVKKTFEEKYQSGKS 127
>TAIR|locus:2129575 [details] [associations]
symbol:AT4G15000 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0022626 "cytosolic
ribosome" evidence=IDA] [GO:0022625 "cytosolic large ribosomal
subunit" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0001510 "RNA methylation" evidence=RCA] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
EnsemblPlants:AT4G15000.1 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006412 GO:GO:0003735 EMBL:AL161540 EMBL:Z97337
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 ProtClustDB:CLSN2683281
PANTHER:PTHR10497 EMBL:AY063987 EMBL:AY096731 EMBL:AY085487
EMBL:Z35388 IPI:IPI00528946 PIR:E71413 RefSeq:NP_193236.1
UniGene:At.24910 ProteinModelPortal:P51419 SMR:P51419 STRING:P51419
PaxDb:P51419 PRIDE:P51419 GeneID:827159 KEGG:ath:AT4G15000
GeneFarm:261 TAIR:At4g15000 InParanoid:P51419 OMA:HRCARTA
PhylomeDB:P51419 Genevestigator:P51419 GermOnline:AT4G15000
Uniprot:P51419
Length = 135
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 46/86 (53%), Positives = 56/86 (65%)
Query: 13 LLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLDVDLKEVVTTNSL 72
L+ G VI K T ++ C + ++ NYQHLMPT YTLDVDLKEV T ++L
Sbjct: 42 LVAGLKKYPSKVIRKDSAKKTAKKSRVKCFI-KLVNYQHLMPTRYTLDVDLKEVATLDAL 100
Query: 73 QSKDKKVTACEETKKHLEEKFKTGKN 98
QSKDKKV A +E K LEE+FKTGKN
Sbjct: 101 QSKDKKVAALKEAKAKLEERFKTGKN 126
Score = 188 (71.2 bits), Expect = 8.8e-15, P = 8.8e-15
Identities = 37/49 (75%), Positives = 41/49 (83%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
MV FLK NKAVILLQGR A +KAVI+KSFDDG R+RP GHCLVA +K Y
Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKY 49
>POMBASE|SPCC74.05 [details] [associations]
symbol:rpl2702 "60S ribosomal protein L27 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0002181 "cytoplasmic
translation" evidence=NAS] [GO:0003735 "structural constituent of
ribosome" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006412 "translation" evidence=ISO] [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISO] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
PomBase:SPCC74.05 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0003735 GO:GO:0002181 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0022625 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 OMA:FNYNHLM OrthoDB:EOG496328 PIR:T41589
RefSeq:NP_588378.1 MINT:MINT-4679882 STRING:O74538 PRIDE:O74538
EnsemblFungi:SPCC74.05.1 GeneID:2539336 KEGG:spo:SPCC74.05
NextBio:20800501 Uniprot:O74538
Length = 136
Score = 113 (44.8 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
MV LKP K ++ +GR A +K VI+++ D G++ P GH +VA ++ Y
Sbjct: 1 MVKILKPGKVALVTRGRFAGKKVVILQNVDQGSKSHPFGHAVVAGVERY 49
Score = 109 (43.4 bits), Expect = 6.0e-17, Sum P(2) = 6.0e-17
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 45 RIKNYQHLMPTCYTLDVD-LKEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y L++D LK +VT + ++ A + K EEK++TGK+
Sbjct: 73 KVINYNHLMPTRYALELDNLKGLVTPTTFSEPSQRSAAKKTVKNTFEEKYQTGKS 127
>UNIPROTKB|G4ML54 [details] [associations]
symbol:MGG_06693 "60S ribosomal protein L27-A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR001141 Pfam:PF01777
ProDom:PD009396 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
EMBL:CM001231 GO:GO:0043581 Gene3D:2.30.30.30 InterPro:IPR014722
KO:K02901 PANTHER:PTHR10497 RefSeq:XP_003709402.1
ProteinModelPortal:G4ML54 EnsemblFungi:MGG_06693T0 GeneID:2684866
KEGG:mgr:MGG_06693 Uniprot:G4ML54
Length = 135
Score = 114 (45.2 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 45 RIKNYQHLMPTCYTLDVD-LKEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT YTL+++ LK VT ++ + ++ A + KK LEE++ +GKN
Sbjct: 72 KVVNYNHLMPTRYTLELEGLKGSVTNDTFKEVSQREDAKKNVKKVLEERYTSGKN 126
Score = 98 (39.6 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 4 FLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
FLK + I+ +GR A +K VI++ D G + P GH +VA I+ Y
Sbjct: 3 FLKVGRVAIITRGRFAGKKVVIIQPVDSGNKLHPYGHAIVAGIERY 48
>FB|FBgn0039359 [details] [associations]
symbol:RpL27 "Ribosomal protein L27" species:7227 "Drosophila
melanogaster" [GO:0003735 "structural constituent of ribosome"
evidence=ISS] [GO:0006412 "translation" evidence=ISS] [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS] [GO:0000022
"mitotic spindle elongation" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0051298 "centrosome duplication"
evidence=IMP] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777
ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467 EMBL:AE014297
GO:GO:0051298 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GO:GO:0000022 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163 KO:K02901
PANTHER:PTHR10497 OMA:FNYNHLM GeneTree:ENSGT00390000010721 CTD:6155
ChiTaRS:RPL27 EMBL:AY070827 RefSeq:NP_651417.1 UniGene:Dm.6265
SMR:Q9VBN5 MINT:MINT-869626 STRING:Q9VBN5
EnsemblMetazoa:FBtr0084932 EnsemblMetazoa:FBtr0331360
EnsemblMetazoa:FBtr0331361 EnsemblMetazoa:FBtr0331362 GeneID:43103
KEGG:dme:Dmel_CG4759 FlyBase:FBgn0039359 InParanoid:Q9VBN5
OrthoDB:EOG41C5CR GenomeRNAi:43103 NextBio:832229 Uniprot:Q9VBN5
Length = 135
Score = 130 (50.8 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 27/49 (55%), Positives = 33/49 (67%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
M +K K VI+L GR A RKA+I+K+ DDGT E+P GH LVA I Y
Sbjct: 1 MRKIMKQGKIVIVLSGRYAGRKAIIVKTHDDGTPEKPFGHALVAGIDRY 49
Score = 81 (33.6 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 48 NYQHLMPTCYTL-DVDLKEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
NY HLMPT YT D+ E ++ L+ K+ T +T+ E +K GKN
Sbjct: 76 NYNHLMPTRYTAHDISF-EKLSPKDLKDPVKRKTHRFQTRVKFESVYKEGKN 126
>TAIR|locus:2045467 [details] [associations]
symbol:AT2G32220 species:3702 "Arabidopsis thaliana"
[GO:0003735 "structural constituent of ribosome" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005840 "ribosome" evidence=IEA;ISS]
[GO:0006412 "translation" evidence=IEA;ISS] [GO:0016020 "membrane"
evidence=IDA] [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IDA] [GO:0001510 "RNA methylation" evidence=RCA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 EnsemblPlants:AT2G32220.1 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0006412 GO:GO:0003735
EMBL:AC006223 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
eggNOG:COG2163 EMBL:BT021972 IPI:IPI00536680 PIR:D84730
RefSeq:NP_180781.1 UniGene:At.38108 ProteinModelPortal:Q9SKX8
SMR:Q9SKX8 STRING:Q9SKX8 PRIDE:Q9SKX8 GeneID:817781
KEGG:ath:AT2G32220 GeneFarm:259 TAIR:At2g32220 HOGENOM:HOG000210138
InParanoid:Q9SKX8 KO:K02901 OMA:RVKCFFK PhylomeDB:Q9SKX8
ProtClustDB:CLSN2683281 Genevestigator:Q9SKX8 GermOnline:AT2G32220
PANTHER:PTHR10497 Uniprot:Q9SKX8
Length = 135
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 41/86 (47%), Positives = 54/86 (62%)
Query: 13 LLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLDVDLKEVVTTNSL 72
L+ G VI K T ++ C ++ NYQH+MPT YTLD+DLK VV+ +++
Sbjct: 42 LVAGLKKYPSKVIRKDSAKKTAKKSRVKCFF-KVINYQHVMPTRYTLDLDLKNVVSADAI 100
Query: 73 QSKDKKVTACEETKKHLEEKFKTGKN 98
SKDKKVTA +E K EE+FKTGKN
Sbjct: 101 SSKDKKVTALKEAKAKFEERFKTGKN 126
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 33/49 (67%), Positives = 38/49 (77%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
MV +KP KAVILLQGR +KAVI+KSFDDGT E+ GHCLVA +K Y
Sbjct: 1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKY 49
>ASPGD|ASPL0000016741 [details] [associations]
symbol:AN4222 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0006412
"translation" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262
Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467
GO:GO:0006412 GO:GO:0005840 EMBL:BN001302 GO:GO:0003735
EMBL:AACD01000068 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR005824 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 OMA:FNYNHLM OrthoDB:EOG496328 RefSeq:XP_661826.1
ProteinModelPortal:Q5B5F8 STRING:Q5B5F8
EnsemblFungi:CADANIAT00004439 GeneID:2873643 KEGG:ani:AN4222.2
Uniprot:Q5B5F8
Length = 135
Score = 112 (44.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 45 RIKNYQHLMPTCYTLDVD-LKEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT YTL+++ LK VT ++ + ++ A + KK LE+++ +GKN
Sbjct: 72 KVVNYNHLMPTRYTLELEGLKGTVTADTFKEVSQREEAKKTIKKALEDRYTSGKN 126
Score = 85 (35.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 4 FLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
F+K + I+ +GR A +K VI++ D G++ P + +VA I+ Y
Sbjct: 3 FMKVGRVAIITRGRYAGKKVVIVQPQDSGSKAHPFSYAIVAGIERY 48
>GENEDB_PFALCIPARUM|PF14_0579 [details] [associations]
symbol:PF14_0579 "ribosomal protein L27,
putative" species:5833 "Plasmodium falciparum" [GO:0022625
"cytosolic large ribosomal subunit" evidence=ISS]
InterPro:IPR001141 Pfam:PF01777 ProDom:PD009396 GO:GO:0006412
GO:GO:0003735 EMBL:AE014187 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0022625 InterPro:IPR005824 SMART:SM00739 HOGENOM:HOG000210138
KO:K02901 PANTHER:PTHR10497 RefSeq:XP_001348753.2
ProteinModelPortal:Q8IKM5 PRIDE:Q8IKM5
EnsemblProtists:PF14_0579:mRNA GeneID:812161 KEGG:pfa:PF14_0579
EuPathDB:PlasmoDB:PF3D7_1460700 ProtClustDB:CLSZ2431717
Uniprot:Q8IKM5
Length = 146
Score = 126 (49.4 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
M LKP K +I+L GR A +KAVI+ +++ TRERP +CLVA I+ +
Sbjct: 1 MGKLLKPGKVIIILNGRRAGKKAVIVNTYEGQTRERPYSYCLVAGIEKH 49
Score = 67 (28.6 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 48 NYQHLMPTCYTL--DVDLKEVVTTNSLQSKDKKVTACEETKKHLEEKF 93
N H++PT Y + D D+K + + + L+SK+KK ++ K +KF
Sbjct: 76 NVNHILPTRYQVANDFDIKSLASDDVLKSKNKKKEV-KKLGKIFRDKF 122
>UNIPROTKB|Q8IKM5 [details] [associations]
symbol:PF14_0579 "60S ribosomal protein L27, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0022625 "cytosolic
large ribosomal subunit" evidence=ISS] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 GO:GO:0006412 GO:GO:0003735
EMBL:AE014187 Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 RefSeq:XP_001348753.2 ProteinModelPortal:Q8IKM5
PRIDE:Q8IKM5 EnsemblProtists:PF14_0579:mRNA GeneID:812161
KEGG:pfa:PF14_0579 EuPathDB:PlasmoDB:PF3D7_1460700
ProtClustDB:CLSZ2431717 Uniprot:Q8IKM5
Length = 146
Score = 126 (49.4 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
M LKP K +I+L GR A +KAVI+ +++ TRERP +CLVA I+ +
Sbjct: 1 MGKLLKPGKVIIILNGRRAGKKAVIVNTYEGQTRERPYSYCLVAGIEKH 49
Score = 67 (28.6 bits), Expect = 6.2e-14, Sum P(2) = 6.2e-14
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 48 NYQHLMPTCYTL--DVDLKEVVTTNSLQSKDKKVTACEETKKHLEEKF 93
N H++PT Y + D D+K + + + L+SK+KK ++ K +KF
Sbjct: 76 NVNHILPTRYQVANDFDIKSLASDDVLKSKNKKKEV-KKLGKIFRDKF 122
>RGD|1560069 [details] [associations]
symbol:RGD1560069 "similar to ribosomal protein L27"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001141 Pfam:PF01777 ProDom:PD009396 RGD:1560069
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30
InterPro:IPR014722 PANTHER:PTHR10497 GeneTree:ENSGT00390000010721
OrthoDB:EOG48SGVG IPI:IPI00359730 Ensembl:ENSRNOT00000057891
UCSC:RGD:1560069 Uniprot:D4A7W3
Length = 137
Score = 116 (45.9 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
M F +P K V++L G+ + KAVI+K DDGT +RP H LVA I Y
Sbjct: 1 MGKFKRPRKVVLVLAGQYSGCKAVILKIIDDGTSDRPYSHALVAGIDRY 49
Score = 69 (29.3 bits), Expect = 4.2e-13, Sum P(2) = 4.2e-13
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEK 92
+I NY LMPT Y +D+ L K VV + + K A +E + EE+
Sbjct: 73 KIYNYNFLMPTRYPMDIPLHKTVVNKDVCRDPALKYMARQEAEVKSEER 121
>UNIPROTKB|D4A7I3 [details] [associations]
symbol:D4A7I3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 GeneTree:ENSGT00390000010721 OrthoDB:EOG48SGVG
IPI:IPI00778616 Ensembl:ENSRNOT00000057689 Uniprot:D4A7I3
Length = 128
Score = 117 (46.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 23/44 (52%), Positives = 31/44 (70%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVA 44
M F+KP K V++L GR + RKAV +K+ DDGT ++P H LVA
Sbjct: 1 MGKFMKPWKVVLILAGRYSGRKAVTVKNIDDGTSDQPYSHALVA 44
Score = 63 (27.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 48 NYQHLMPTCYTLDVDLKEVVTTNSLQSKDKKVTACE 83
NY HLMPT Y++++ L + V N + +D V C+
Sbjct: 69 NYSHLMPTRYSVEIPLDKTVI-NKVVFRDP-VLKCK 102
>UNIPROTKB|F1MSX2 [details] [associations]
symbol:F1MSX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] [GO:0003735 "structural constituent of
ribosome" evidence=IEA] InterPro:IPR001141 Pfam:PF01777
ProDom:PD009396 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 PANTHER:PTHR10497
GeneTree:ENSGT00390000010721 EMBL:DAAA02054982 IPI:IPI00718703
Ensembl:ENSBTAT00000005528 Uniprot:F1MSX2
Length = 136
Score = 89 (36.4 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 11 VILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
+++L G + RKAVIMK+ DDGT R H LVA I Y
Sbjct: 11 MLVLAGHYSERKAVIMKNIDDGTSGRIYNHVLVAGIDCY 49
Score = 77 (32.2 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 44 ARIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
A++ + L PT Y++D L K VV + + K A E K EE++KTGKN
Sbjct: 72 AKVYHSNQLRPTNYSVDNPLDKAVVNEDIFREPVVKRKAKREAKFKSEERYKTGKN 127
>DICTYBASE|DDB_G0271298 [details] [associations]
symbol:rpl27 "S60 ribosomal protein L27"
species:44689 "Dictyostelium discoideum" [GO:0006412 "translation"
evidence=IEA] [GO:0005840 "ribosome" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003735 "structural constituent
of ribosome" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 dictyBase:DDB_G0271298 GO:GO:0006412
GenomeReviews:CM000151_GR EMBL:AAFI02000006 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163 KO:K02901
PANTHER:PTHR10497 RefSeq:XP_645666.1 ProteinModelPortal:Q55BE6
STRING:Q55BE6 PRIDE:Q55BE6 EnsemblProtists:DDB0230153
GeneID:8617858 KEGG:ddi:DDB_G0271298 OMA:VIVRSFD
ProtClustDB:PTZ00471 Uniprot:Q55BE6
Length = 144
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 33/78 (42%), Positives = 46/78 (58%)
Query: 4 FLKPNKAVILLQGRNASRKAVIMKSFDDGT--RERPNGHCLVARIKNYQHLMPTCYTLDV 61
F+KP + VILL G+ A RKAV++K+FDD T + RP GHCLVA I Y P +
Sbjct: 5 FIKPGRLVILLNGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKY----PRSIVRSM 60
Query: 62 DLKEVVTTNSLQSKDKKV 79
K ++ +++S K V
Sbjct: 61 SRKTILKRTAIRSFVKVV 78
>RGD|1585224 [details] [associations]
symbol:Rpl27-l1 "ribosomal protein L27-like 1" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
RGD:1585224 Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR005824
SMART:SM00739 PANTHER:PTHR10497 OMA:GTSEKQY
GeneTree:ENSGT00390000010721 OrthoDB:EOG48SGVG IPI:IPI00188985
RefSeq:XP_001068279.1 RefSeq:XP_002727618.1 PRIDE:D4AD41
Ensembl:ENSRNOT00000047308 GeneID:688784 KEGG:rno:688784 CTD:688784
NextBio:737238 Uniprot:D4AD41
Length = 136
Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RKAVI+K+ DDGT +RP H LVA I +Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDHY----PRKVTAA 56
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 57 MGKKKIAKRSKIKS 70
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HL+PT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 73 KLYNYNHLVPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 127
>UNIPROTKB|Q9XSU7 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR005824
SMART:SM00739 eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901
PANTHER:PTHR10497 CTD:6155 HOVERGEN:HBG050005 OrthoDB:EOG48SGVG
EMBL:AJ388516 RefSeq:NP_001003102.2 UniGene:Cfa.28035
ProteinModelPortal:Q9XSU7 STRING:Q9XSU7 GeneID:403688
KEGG:cfa:403688 InParanoid:Q9XSU7 NextBio:20817192 Uniprot:Q9XSU7
Length = 136
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RKAVI+K+ DDGT +RP H LVA I Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRY----PRKVTAA 56
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 57 MGKKKIAKRSKIKS 70
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EEK+KTGKN
Sbjct: 73 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEEKYKTGKN 127
>UNIPROTKB|P61355 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9031
"Gallus gallus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 CTD:6155 HOVERGEN:HBG050005
OrthoDB:EOG48SGVG EMBL:X56852 IPI:IPI00577674 PIR:S22288
RefSeq:NP_990668.1 UniGene:Gga.743 ProteinModelPortal:P61355
SMR:P61355 STRING:P61355 PRIDE:P61355 Ensembl:ENSGALT00000004478
Ensembl:ENSGALT00000039748 GeneID:396280 KEGG:gga:396280
InParanoid:P61355 NextBio:20816331 Uniprot:P61355
Length = 136
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RKAVI+K+ DDGT +RP H LVA I Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRY----PRKVTAA 56
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 57 MGKKKIAKRSKIKS 70
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 73 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 127
>UNIPROTKB|P61356 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9913 "Bos
taurus" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 EMBL:AB098983 EMBL:BC102313
IPI:IPI00696544 RefSeq:NP_001029223.1 UniGene:Bt.4721
ProteinModelPortal:P61356 SMR:P61356 STRING:P61356 PRIDE:P61356
Ensembl:ENSBTAT00000023183 GeneID:404137 KEGG:bta:404137 CTD:6155
HOVERGEN:HBG050005 InParanoid:P61356 OrthoDB:EOG48SGVG
NextBio:20817574 Uniprot:P61356
Length = 136
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RKAVI+K+ DDGT +RP H LVA I Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRY----PRKVTAA 56
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 57 MGKKKIAKRSKIKS 70
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 73 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 127
>UNIPROTKB|F2Z4N3 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9615
"Canis lupus familiaris" [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR005824
SMART:SM00739 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 CTD:6155 RefSeq:NP_001003102.2
UniGene:Cfa.28035 GeneID:403688 KEGG:cfa:403688 NextBio:20817192
EMBL:AAEX03006440 ProteinModelPortal:F2Z4N3 SMR:F2Z4N3 PRIDE:F2Z4N3
Ensembl:ENSCAFT00000023219 Uniprot:F2Z4N3
Length = 136
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RKAVI+K+ DDGT +RP H LVA I Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRY----PRKVTAA 56
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 57 MGKKKIAKRSKIKS 70
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 73 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 127
>UNIPROTKB|P61353 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=NAS;TAS] [GO:0005840 "ribosome" evidence=TAS] [GO:0006412
"translation" evidence=NAS;TAS] [GO:0022625 "cytosolic large
ribosomal subunit" evidence=IDA] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006413 "translational
initiation" evidence=TAS] [GO:0006414 "translational elongation"
evidence=TAS] [GO:0006415 "translational termination" evidence=TAS]
[GO:0006614 "SRP-dependent cotranslational protein targeting to
membrane" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0016032 "viral reproduction" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019058 "viral infectious cycle"
evidence=TAS] [GO:0019083 "viral transcription" evidence=TAS]
[GO:0044267 "cellular protein metabolic process" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 Reactome:REACT_116125 GO:GO:0000184
GO:GO:0006413 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
GO:GO:0006415 GO:GO:0006414 Reactome:REACT_1762 GO:GO:0006614
GO:GO:0022625 InterPro:IPR005824 SMART:SM00739 GO:GO:0019083
eggNOG:COG2163 HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497
OMA:FNYNHLM CTD:6155 HOVERGEN:HBG050005 OrthoDB:EOG48SGVG
EMBL:L19527 EMBL:AB061851 EMBL:L05094 EMBL:BC001700 EMBL:BC002588
EMBL:BC007273 EMBL:BC010026 EMBL:BC098560 IPI:IPI00219155
PIR:S43505 RefSeq:NP_000979.1 UniGene:Hs.514196 UniGene:Hs.660076
ProteinModelPortal:P61353 SMR:P61353 IntAct:P61353
MINT:MINT-1145695 STRING:P61353 PhosphoSite:P61353 DMDM:47117772
SWISS-2DPAGE:P61353 PaxDb:P61353 PRIDE:P61353 DNASU:6155
Ensembl:ENST00000253788 GeneID:6155 KEGG:hsa:6155 UCSC:uc002icj.3
GeneCards:GC17P041150 HGNC:HGNC:10328 HPA:HPA002649 MIM:607526
neXtProt:NX_P61353 PharmGKB:PA34707 InParanoid:P61353
PhylomeDB:P61353 ChiTaRS:RPL27 GenomeRNAi:6155 NextBio:23903
ArrayExpress:P61353 Bgee:P61353 CleanEx:HS_RPL27
Genevestigator:P61353 GermOnline:ENSG00000131469 Uniprot:P61353
Length = 136
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RKAVI+K+ DDGT +RP H LVA I Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRY----PRKVTAA 56
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 57 MGKKKIAKRSKIKS 70
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 73 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 127
>UNIPROTKB|A1XQU5 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 KO:K02901 PANTHER:PTHR10497
CTD:6155 HOVERGEN:HBG050005 EMBL:DQ629167 RefSeq:NP_001090948.1
UniGene:Ssc.13574 ProteinModelPortal:A1XQU5 SMR:A1XQU5 PRIDE:A1XQU5
GeneID:100037995 KEGG:ssc:100037995 Uniprot:A1XQU5
Length = 136
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RKAVI+K+ DDGT +RP H LVA I Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRY----PRKVTAA 56
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 57 MGKKKIAKRSKIKS 70
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 73 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 127
>RGD|621192 [details] [associations]
symbol:Rpl27 "ribosomal protein L27" species:10116 "Rattus
norvegicus" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0022625
"cytosolic large ribosomal subunit" evidence=IEA;ISO] [GO:0030529
"ribonucleoprotein complex" evidence=ISO] InterPro:IPR001141
InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107
RGD:621192 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 CTD:6155 HOVERGEN:HBG050005
OrthoDB:EOG48SGVG EMBL:X07424 EMBL:BC058474 EMBL:BC091566
IPI:IPI00231360 PIR:S00401 RefSeq:NP_071959.1 UniGene:Rn.1254
ProteinModelPortal:P61354 SMR:P61354 IntAct:P61354 STRING:P61354
PRIDE:P61354 Ensembl:ENSRNOT00000028060 GeneID:64306 KEGG:rno:64306
UCSC:RGD:621192 InParanoid:P61354 NextBio:612950
Genevestigator:P61354 GermOnline:ENSRNOG00000020674 Uniprot:P61354
Length = 136
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/74 (41%), Positives = 44/74 (59%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RKAVI+K+ DDGT +RP H LVA I Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRY----PRKVTAA 56
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 57 MGKKKIAKRSKIKS 70
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 73 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 127
>RGD|1565900 [details] [associations]
symbol:RGD1565900 "similar to ribosomal protein L27"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001141 Pfam:PF01777 ProDom:PD009396 RGD:1565900
Pfam:PF00467 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 InterPro:IPR005824
SMART:SM00739 PANTHER:PTHR10497 OrthoDB:EOG48SGVG IPI:IPI00368970
RefSeq:XP_003750581.1 RefSeq:XP_003754482.1 RefSeq:XP_213135.1
PRIDE:D3ZYF9 Ensembl:ENSRNOT00000044219 GeneID:100912027
GeneID:300833 KEGG:rno:100912027 KEGG:rno:300833 UCSC:RGD:1565900
CTD:300833 OMA:VANDFDI NextBio:647598 Uniprot:D3ZYF9
Length = 136
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M +KP K V++L GR + RKAVI+K+ DDGT +RP H LVA I Y P T
Sbjct: 1 MGKLMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRY----PRKVTAA 56
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 57 MGKKKITKQSKIKS 70
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY H MPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 73 KVYNYNHFMPTRYSVDIPLDKTVVNKDVFRDSALKRKARREVKVKFEERYKTGKN 127
>UNIPROTKB|I3LIX1 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9823 "Sus
scrofa" [GO:0022625 "cytosolic large ribosomal subunit"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0003735
"structural constituent of ribosome" evidence=IEA]
InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777 ProDom:PD009396
PROSITE:PS01107 Pfam:PF00467 GO:GO:0006412 GO:GO:0003735
Gene3D:2.30.30.30 InterPro:IPR014722 GO:GO:0022625
InterPro:IPR005824 SMART:SM00739 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 EMBL:FP340289
Ensembl:ENSSSCT00000026116 Uniprot:I3LIX1
Length = 135
Score = 127 (49.8 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 30/74 (40%), Positives = 44/74 (59%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RKAVI+K+ DDG+ +RP H LVA I Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGS-DRPYSHALVAGIDRY----PRKVTAA 55
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 56 MGKKKIAKRSKIKS 69
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 72 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 126
>UNIPROTKB|D3ZZV8 [details] [associations]
symbol:D3ZZV8 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 OrthoDB:EOG48SGVG IPI:IPI00780129 PRIDE:D3ZZV8
Ensembl:ENSRNOT00000054903 OMA:VTSIRRR Uniprot:D3ZZV8
Length = 137
Score = 124 (48.7 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RKA+I+K+ DD T + P H LVA I Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSRRKAIIVKNIDDSTSDHPYSHALVAGIDCY----PRKVTAT 56
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 57 MGKKKIAKRSKIKS 70
>UNIPROTKB|E2QVG7 [details] [associations]
symbol:RPL27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 GeneTree:ENSGT00390000010721 OMA:VIVRSFD
EMBL:AAEX03017288 Ensembl:ENSCAFT00000020952 Uniprot:E2QVG7
Length = 134
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 30/74 (40%), Positives = 41/74 (55%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M F+KP K V++L GR + RK VIM DDGT +RP H LVA I Y P T
Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKVVIM--IDDGTSDRPYSHALVAGIDRY----PRKVTAA 54
Query: 61 VDLKEVVTTNSLQS 74
+ K++ + ++S
Sbjct: 55 MGKKKIAKRSKIKS 68
Score = 113 (44.8 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 71 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKCKARREAKVKFEERYKTGKN 125
>RGD|1587075 [details] [associations]
symbol:LOC680808 "hypothetical protein LOC680808" species:10116
"Rattus norvegicus" [GO:0003735 "structural constituent of
ribosome" evidence=IEA] [GO:0005840 "ribosome" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 RGD:1587075 GO:GO:0006412
GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 IPI:IPI00566947 Ensembl:ENSRNOT00000052132
Uniprot:F1M0X8
Length = 128
Score = 76 (31.8 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 4 FLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNY 49
F+ P K ++ L G + KAV++K+ D GT + + LV R Y
Sbjct: 4 FMNPGKEMLFLAGCYSGHKAVVVKNID-GTSDHSHSRVLVVRTDRY 48
Score = 57 (25.1 bits), Expect = 9.8e-08, Sum P(2) = 9.8e-08
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 48 NYQHLMPTCYTLDV 61
NY HLMPT Y++D+
Sbjct: 75 NYSHLMPTRYSVDI 88
>UNIPROTKB|E2R202 [details] [associations]
symbol:E2R202 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006412 "translation" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0003735 "structural
constituent of ribosome" evidence=IEA] InterPro:IPR001141
Pfam:PF01777 ProDom:PD009396 GO:GO:0006412 GO:GO:0005840
GO:GO:0003735 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 GeneTree:ENSGT00390000010721 EMBL:AAEX03015530
Ensembl:ENSCAFT00000017248 OMA:SKLMEPP Uniprot:E2R202
Length = 117
Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 36/109 (33%), Positives = 53/109 (48%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCY--- 57
M F+KP K +++L G + KAVIMK+ DDGT +RP + LVA I +C+
Sbjct: 1 MGKFMKPGKVMLVLAGGYSGHKAVIMKNIDDGTSDRPYSYALVAGIDRTPK-SDSCHGKN 59
Query: 58 --TLDVDLKEVVTT-NSLQSKDKKVTAC-----EETKKHLEEKFKTGKN 98
T +K V N + + + E K EE++KTG+N
Sbjct: 60 KITKRSKIKSFVKVYNYIHLMPTRYSVDIPLDKREAKIKFEERYKTGQN 108
>WB|WBGene00004441 [details] [associations]
symbol:rpl-27 species:6239 "Caenorhabditis elegans"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] InterPro:IPR001141 InterPro:IPR018262 Pfam:PF01777
ProDom:PD009396 PROSITE:PS01107 Pfam:PF00467 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0006412 GO:GO:0018996
GO:GO:0000003 GO:GO:0005840 GO:GO:0003735 Gene3D:2.30.30.30
InterPro:IPR014722 InterPro:IPR005824 SMART:SM00739 eggNOG:COG2163
HOGENOM:HOG000210138 KO:K02901 PANTHER:PTHR10497 OMA:FNYNHLM
GeneTree:ENSGT00390000010721 EMBL:U89308 EMBL:FO080940
RefSeq:NP_490905.1 UniGene:Cel.19696 ProteinModelPortal:P91914
SMR:P91914 STRING:P91914 PaxDb:P91914 EnsemblMetazoa:C53H9.1.1
EnsemblMetazoa:C53H9.1.2 GeneID:171750 KEGG:cel:CELE_C53H9.1
UCSC:C53H9.1.1 CTD:171750 WormBase:C53H9.1 InParanoid:P91914
NextBio:872543 Uniprot:P91914
Length = 136
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 35/105 (33%), Positives = 54/105 (51%)
Query: 1 MVTFLKPNKAVILLQGRNASRKAVIMKSFDDGTRERPNGHCLVARIKNYQHLMPTCYTLD 60
M +KP K V++L+G+ A RKAV++K D+G +R H ++A I Y P T D
Sbjct: 1 MGKIMKPGKVVLVLRGKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRY----PLKVTKD 56
Query: 61 VDLKEVVTTNSLQSKDKKV--TACEETKKHLEEKF-KTGKNLGSL 102
+ K++ N L+ K V T T+ ++ F KT N +L
Sbjct: 57 MGKKKIEKRNKLKPFLKVVSYTHLLPTRYSVDVAFDKTNINKEAL 101
Score = 108 (43.1 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ +Y HL+PT Y++DV K + +L++ KK A E K EE++KTGKN
Sbjct: 73 KVVSYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKN 127
>UNIPROTKB|K7ELC7 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262
Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 EMBL:AC055866
Gene3D:2.30.30.30 InterPro:IPR014722 PANTHER:PTHR10497
HGNC:HGNC:10328 Ensembl:ENST00000586277 Uniprot:K7ELC7
Length = 144
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 81 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 135
>UNIPROTKB|K7EQQ9 [details] [associations]
symbol:RPL27 "60S ribosomal protein L27" species:9606 "Homo
sapiens" [GO:0003735 "structural constituent of ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0005840
"ribosome" evidence=IEA] InterPro:IPR001141 InterPro:IPR018262
Pfam:PF01777 ProDom:PD009396 PROSITE:PS01107 EMBL:CH471152
EMBL:AC055866 GO:GO:0005840 Gene3D:2.30.30.30 InterPro:IPR014722
PANTHER:PTHR10497 HGNC:HGNC:10328 Ensembl:ENST00000590864
Uniprot:K7EQQ9
Length = 80
Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
++ NY HLMPT Y++D+ L K VV + + K A E K EE++KTGKN
Sbjct: 17 KVYNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKN 71
>RGD|1561870 [details] [associations]
symbol:RGD1561870 "similar to ribosomal protein L27"
species:10116 "Rattus norvegicus" [GO:0003735 "structural
constituent of ribosome" evidence=IEA] [GO:0005840 "ribosome"
evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR001141 Pfam:PF01777 ProDom:PD009396 RGD:1561870
GO:GO:0006412 EMBL:CH473956 GO:GO:0005840 GO:GO:0003735
PANTHER:PTHR10497 GeneTree:ENSGT00390000010721 OrthoDB:EOG48SGVG
IPI:IPI00561792 RefSeq:NP_001102806.1 UniGene:Rn.218653
Ensembl:ENSRNOT00000067026 GeneID:502353 KEGG:rno:502353
UCSC:RGD:1561870 CTD:502353 NextBio:711333 Uniprot:D3ZK92
Length = 102
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 45 RIKNYQHLMPTCYTLDVDL-KEVVTTNSLQSKDKKVTACEETKKHLEEKFKTGKN 98
R++NY HL PT +D+ L K VV N + K A E K E+ KTG+N
Sbjct: 44 RVENYNHLRPTRCPVDIPLDKTVVNKNIFRDPALKCKARWEAKVKFEDPLKTGRN 98
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.366 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 105 105 0.00091 102 3 11 22 0.43 30
29 0.39 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 36
No. of states in DFA: 520 (55 KB)
Total size of DFA: 106 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 12.91u 0.10s 13.01t Elapsed: 00:00:01
Total cpu time: 12.91u 0.10s 13.01t Elapsed: 00:00:01
Start: Mon May 20 21:21:10 2013 End: Mon May 20 21:21:11 2013