BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035914
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M352|RL362_ARATH 60S ribosomal protein L36-2 OS=Arabidopsis thaliana GN=RPL36B PE=2
SV=1
Length = 112
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/105 (58%), Positives = 69/105 (65%), Gaps = 17/105 (16%)
Query: 1 MVPKQSNTGLFVGLSKG-----------------KTSKGVDFERNVIREVAGFASYKKGI 43
M Q TGLFVGL+KG KTSK F RN+I+EVAG A Y+K I
Sbjct: 1 MTTPQVKTGLFVGLNKGHVVTRRELAPRPRSRKGKTSKRTIFIRNLIKEVAGQAPYEKRI 60
Query: 44 NKLLKVGKDKRTLKVAKKKLGAHKRAKMKREEMSNVLRWTRATGG 88
+LLKVGKDKR LKVAK+KLG HKRAK KREEMS+VLR R+ GG
Sbjct: 61 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGG 105
>sp|O80929|RL361_ARATH 60S ribosomal protein L36-1 OS=Arabidopsis thaliana GN=RPL36A PE=2
SV=1
Length = 113
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 67/105 (63%), Gaps = 17/105 (16%)
Query: 1 MVPKQSNTGLFVGLSKG-----------------KTSKGVDFERNVIREVAGFASYKKGI 43
M TGLFVGL+KG KTSK F R +IREVAG A Y+K I
Sbjct: 1 MTTPAVKTGLFVGLNKGHVVTRRELAPRPNSRKGKTSKRTIFIRKLIREVAGMAPYEKRI 60
Query: 44 NKLLKVGKDKRTLKVAKKKLGAHKRAKMKREEMSNVLRWTRATGG 88
+LLKVGKDKR LKVAK+KLG HKRAK KREEMS+VLR R+ GG
Sbjct: 61 TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSLGG 105
>sp|Q9LZ57|RL363_ARATH 60S ribosomal protein L36-3 OS=Arabidopsis thaliana GN=RPL36C PE=3
SV=1
Length = 108
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 66/98 (67%), Gaps = 17/98 (17%)
Query: 8 TGLFVGLSKG-----------------KTSKGVDFERNVIREVAGFASYKKGINKLLKVG 50
TGLFVGL+KG KTSK F RN+I+EVAG A Y+K I +LLKVG
Sbjct: 4 TGLFVGLNKGHVVTKREQPPRPNNRKGKTSKRTIFIRNLIKEVAGQAPYEKRITELLKVG 63
Query: 51 KDKRTLKVAKKKLGAHKRAKMKREEMSNVLRWTRATGG 88
KDKR LKVAK+KLG HKRAK KREEMS+VLR R+ G
Sbjct: 64 KDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRSGGA 101
>sp|P52866|RL36_DAUCA 60S ribosomal protein L36 OS=Daucus carota GN=RPL36 PE=3 SV=2
Length = 106
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 59/96 (61%), Gaps = 19/96 (19%)
Query: 1 MVPKQSNTGLFVGLSKG-----------------KTSKGVDFERNVIREVAGFASYKKGI 43
M PKQ NTGLFVGL+KG KTSK F RN+IREVAGF Y+K I
Sbjct: 1 MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRTHFVRNLIREVAGFXPYEKRI 60
Query: 44 NKLLKVGKDKRTLKVAKKKLGAHKRAKMKREEMSNV 79
+LLKVGKDKR LKV ++K+G + + K EE +V
Sbjct: 61 TELLKVGKDKRALKVRQEKVGHSQES--KEEERGDV 94
>sp|Q6DER2|RL36_XENTR 60S ribosomal protein L36 OS=Xenopus tropicalis GN=rpl36 PE=3
SV=1
Length = 105
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
+G+ +K F R++IREV GFA Y++ +LLKV KDKR LK KK++G H RAK KREE
Sbjct: 30 RGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREE 89
Query: 76 MSNVL 80
+SNVL
Sbjct: 90 LSNVL 94
>sp|Q66KU4|RL36_XENLA 60S ribosomal protein L36 OS=Xenopus laevis GN=rpl36 PE=3 SV=1
Length = 105
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
+G+ +K F R++IREV GFA Y++ +LLKV KDKR LK KK++G H RAK KREE
Sbjct: 30 RGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRIGTHIRAKRKREE 89
Query: 76 MSNVL 80
+SNVL
Sbjct: 90 LSNVL 94
>sp|Q98TF6|RL36_CHICK 60S ribosomal protein L36 OS=Gallus gallus GN=RPL36 PE=3 SV=1
Length = 105
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
+G+ +K F R++IREV GFA Y++ +LLKV KDKR LK KK++G H RAK KREE
Sbjct: 30 RGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREE 89
Query: 76 MSNVL 80
+SNVL
Sbjct: 90 LSNVL 94
>sp|Q8UW19|RL36_LAPHA 60S ribosomal protein L36 OS=Lapemis hardwickii GN=RPL36 PE=3
SV=1
Length = 105
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
+G+ +K F R++IREV GFA Y++ +LLKV KDKR LK KK++G H RAK KREE
Sbjct: 30 RGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREE 89
Query: 76 MSNVL 80
+SNVL
Sbjct: 90 LSNVL 94
>sp|Q90YT2|RL36_ICTPU 60S ribosomal protein L36 OS=Ictalurus punctatus GN=rpl36 PE=3
SV=1
Length = 105
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 7/78 (8%)
Query: 3 PKQSNTGLFVGLSKGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKK 62
PK S G G+ +K F R++IREV GFA Y++ +LLKV KDKR LK KK+
Sbjct: 24 PKHSRRG-------GRLTKHSKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKR 76
Query: 63 LGAHKRAKMKREEMSNVL 80
+G H RAK KREE+SN+L
Sbjct: 77 VGTHIRAKRKREELSNIL 94
>sp|Q5RAZ9|RL36_PONAB 60S ribosomal protein L36 OS=Pongo abelii GN=RPL36 PE=3 SV=3
Length = 105
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
+G+ +K F R++IREV GFA Y++ +LLKV KDKR LK KK++G H RAK KREE
Sbjct: 30 RGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREE 89
Query: 76 MSNVL 80
+SNVL
Sbjct: 90 LSNVL 94
>sp|Q9Y3U8|RL36_HUMAN 60S ribosomal protein L36 OS=Homo sapiens GN=RPL36 PE=1 SV=3
Length = 105
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
+G+ +K F R++IREV GFA Y++ +LLKV KDKR LK KK++G H RAK KREE
Sbjct: 30 RGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREE 89
Query: 76 MSNVL 80
+SNVL
Sbjct: 90 LSNVL 94
>sp|Q3T171|RL36_BOVIN 60S ribosomal protein L36 OS=Bos taurus GN=RPL36 PE=3 SV=3
Length = 105
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
+G+ +K F R++IREV GFA Y++ +LLKV KDKR LK KK++G H RAK KREE
Sbjct: 30 RGRLTKHTKFVRDMIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREE 89
Query: 76 MSNVL 80
+SNVL
Sbjct: 90 LSNVL 94
>sp|Q6Q415|RL36_DANRE 60S ribosomal protein L36 OS=Danio rerio GN=rpl36 PE=3 SV=1
Length = 105
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
+G+ +K F R++IREV GFA Y++ +LLKV KDKR LK KK++G H RAK KREE
Sbjct: 30 RGRLTKHAKFARDLIREVCGFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREE 89
Query: 76 MSNVL 80
+SN L
Sbjct: 90 LSNTL 94
>sp|Q4PM12|RL36_IXOSC 60S ribosomal protein L36 OS=Ixodes scapularis GN=RpL36 PE=3 SV=1
Length = 110
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
KG SK F R++IREV GFA +++ +LLKV KDKR LK KK+LG H R K KR+E
Sbjct: 30 KGALSKHTRFVRDLIREVCGFAPFERRAMELLKVSKDKRALKFIKKRLGTHLRGKRKRDE 89
Query: 76 MSNVLRWTR-ATGGEEKT 92
+SNVL R A +EKT
Sbjct: 90 LSNVLVAQRKAAAHKEKT 107
>sp|P39032|RL36_RAT 60S ribosomal protein L36 OS=Rattus norvegicus GN=Rpl36 PE=1 SV=2
Length = 105
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
+G+ +K F R++IREV FA Y++ +LLKV KDKR LK KK++G H RAK KREE
Sbjct: 30 RGRLTKHTKFVRDMIREVCAFAPYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREE 89
Query: 76 MSNVL 80
+SNVL
Sbjct: 90 LSNVL 94
>sp|Q9LRB8|RL36_ENTCP 60S ribosomal protein L36 OS=Enteromorpha compressa GN=RL36 PE=3
SV=1
Length = 101
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 51/71 (71%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
KG S+ V R V+REVAG+A Y++ + +LLKVGKDKR LK+ K+KLG H R K KREE
Sbjct: 27 KGFLSQRVKKVRAVVREVAGWAPYERRVMELLKVGKDKRALKMCKRKLGTHMRGKKKREE 86
Query: 76 MSNVLRWTRAT 86
M+ VLR +A
Sbjct: 87 MAGVLRKMQAA 97
>sp|O94658|RL36B_SCHPO 60S ribosomal protein L36-B OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl36b PE=3 SV=1
Length = 99
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 17/93 (18%)
Query: 9 GLFVGLSKGKT-----------------SKGVDFERNVIREVAGFASYKKGINKLLKVGK 51
GL VGL+KGKT SK F R+++REVAGFA Y++ + +L++ +
Sbjct: 4 GLVVGLNKGKTLTKRQLPERPSRRKGHLSKRTAFVRSIVREVAGFAPYERRVMELIRNSQ 63
Query: 52 DKRTLKVAKKKLGAHKRAKMKREEMSNVLRWTR 84
DKR K+AKK+LG KRAK K EE+++V++ +R
Sbjct: 64 DKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
>sp|P47964|RL36_MOUSE 60S ribosomal protein L36 OS=Mus musculus GN=Rpl36 PE=2 SV=2
Length = 105
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
+ + + F R++IREV GFA Y++ +LLKV K KR LK KK++G H RAK KREE
Sbjct: 30 RSRLTNHTKFVRDMIREVCGFAPYERRAMELLKVSKSKRALKFIKKRVGTHIRAKRKREE 89
Query: 76 MSNVL 80
+SNVL
Sbjct: 90 LSNVL 94
>sp|P49630|RL36_DROME 60S ribosomal protein L36 OS=Drosophila melanogaster GN=RpL36 PE=3
SV=1
Length = 115
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 20 SKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREEMSNV 79
++ F R+++REV G A Y+K +LLKV KDKR LK K++LG H RAK KREE+SN+
Sbjct: 44 TRHTKFMRDLVREVVGHAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNI 103
Query: 80 LRWTR 84
L R
Sbjct: 104 LTQLR 108
>sp|Q92365|RL36A_SCHPO 60S ribosomal protein L36-A OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rpl36a PE=3 SV=2
Length = 99
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 58/93 (62%), Gaps = 17/93 (18%)
Query: 9 GLFVGLSKGKT-----------------SKGVDFERNVIREVAGFASYKKGINKLLKVGK 51
GL VGL+KGK SK F R+++REVAGFA Y++ + +L++ +
Sbjct: 4 GLVVGLNKGKVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQ 63
Query: 52 DKRTLKVAKKKLGAHKRAKMKREEMSNVLRWTR 84
DKR K+AKK+LG KRAK K EE+++V++ +R
Sbjct: 64 DKRARKLAKKRLGTLKRAKGKIEELTSVIQSSR 96
>sp|P49181|RL36_CAEEL 60S ribosomal protein L36 OS=Caenorhabditis elegans GN=rpl-36
PE=1 SV=3
Length = 104
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREE 75
KG SK R ++RE+ GFA Y++ + ++L++ KDKR LK K+++G H+RAK KREE
Sbjct: 32 KGVASKKTKIVRELVREITGFAPYERRVLEMLRISKDKRALKFLKRRIGTHRRAKGKREE 91
Query: 76 MSNVL 80
+ NV+
Sbjct: 92 LQNVI 96
>sp|P0C6E6|RL36X_HUMAN Putative 60S ribosomal protein L36-like 1 OS=Homo sapiens PE=5
SV=1
Length = 105
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 15 SKGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKRE 74
S G+ +K R +I+EV GF Y++ +LLKV KDK+ LK KK++G H K KRE
Sbjct: 29 SLGRPTKHTKCVRGMIQEVCGFTPYERCTMELLKVSKDKQALKFIKKRVGTHIHTKRKRE 88
Query: 75 EMSNVLRWTR 84
E+SNVL TR
Sbjct: 89 ELSNVLAITR 98
>sp|Q55AQ9|RL36_DICDI 60S ribosomal protein L36 OS=Dictyostelium discoideum GN=rpl36 PE=3
SV=1
Length = 105
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 2 VPKQSNTGLFVGLSKGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKK 61
V K++ T F K +K V R+VIRE++GF+ Y++ +++LLK G DKR LKVAKK
Sbjct: 24 VAKRTVTSTF---KKQVVTKRVAAIRDVIREISGFSPYERRVSELLKSGLDKRALKVAKK 80
Query: 62 KLGAHKRAKMKREEMSNVLRWTRA 85
+LG+ + K KR++++N+ R A
Sbjct: 81 RLGSIQAGKKKRDDIANINRKASA 104
>sp|Q9HFR7|RL36_TRIHM 60S ribosomal protein L36 OS=Trichoderma hamatum GN=rpl36 PE=3 SV=1
Length = 105
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 53/96 (55%), Gaps = 17/96 (17%)
Query: 6 SNTGLFVGL-----------------SKGKTSKGVDFERNVIREVAGFASYKKGINKLLK 48
+ TGL VGL +KG SK F R V++EVAG A Y++ + +LL+
Sbjct: 7 AKTGLAVGLNKGHKTTARVVKPRVSRTKGHLSKRTAFVREVVKEVAGLAPYERRVIELLR 66
Query: 49 VGKDKRTLKVAKKKLGAHKRAKMKREEMSNVLRWTR 84
KDKR K+AKK+LG RAK K +E+ V+ +R
Sbjct: 67 NSKDKRARKLAKKRLGTFGRAKRKVDELQRVIAESR 102
>sp|O14455|RL36B_YEAST 60S ribosomal protein L36-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL36B PE=1 SV=3
Length = 100
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 17/94 (18%)
Query: 8 TGLFVGLSKGK-----------------TSKGVDFERNVIREVAGFASYKKGINKLLKVG 50
TG+ +GL+KGK S F R+++RE+AG + Y++ + L++
Sbjct: 5 TGIAIGLNKGKKVTQMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNS 64
Query: 51 KDKRTLKVAKKKLGAHKRAKMKREEMSNVLRWTR 84
+KR KVAKK+LG+ RAK K EEM+N++ +R
Sbjct: 65 GEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 98
>sp|P05745|RL36A_YEAST 60S ribosomal protein L36-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPL36A PE=1 SV=3
Length = 100
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 17/94 (18%)
Query: 8 TGLFVGLSKGK-----------------TSKGVDFERNVIREVAGFASYKKGINKLLKVG 50
TG+ +GL+KGK S F R+++RE+AG + Y++ + L++
Sbjct: 5 TGIAIGLNKGKKVTSMTPAPKISYKKGAASNRTKFVRSLVREIAGLSPYERRLIDLIRNS 64
Query: 51 KDKRTLKVAKKKLGAHKRAKMKREEMSNVLRWTR 84
+KR KVAKK+LG+ RAK K EEM+N++ +R
Sbjct: 65 GEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASR 98
>sp|Q24F59|RL36_TETTS 60S ribosomal protein L36 OS=Tetrahymena thermophila (strain SB210)
GN=RPL36 PE=1 SV=1
Length = 104
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVG--KD-KRTLKVAKKKLGAHKRAKMK 72
KGK K V R VIREV GFA Y+K I +L+K G KD K+ K+A+K+LG H+RAK+K
Sbjct: 31 KGKLGKRVALVRQVIREVTGFAPYEKRIIELIKAGSAKDSKKATKIARKRLGTHRRAKVK 90
Query: 73 REEMSNVLRWTR 84
+ + +R R
Sbjct: 91 KALLEEAVRAQR 102
>sp|P47834|RL36_CANAX 60S ribosomal protein L36 OS=Candida albicans GN=RPL36 PE=3 SV=1
Length = 99
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 12 VGLSKGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKM 71
+ KG +S+ F R++++EVAG A Y++ + +L++ +KR K+AKK+LG HKRA
Sbjct: 25 ISYRKGASSQRTVFVRSIVKEVAGLAPYERRLIELIRNAGEKRAKKLAKKRLGTHKRALR 84
Query: 72 KREEMSNVLRWTR 84
K EEM+ V+ +R
Sbjct: 85 KVEEMTQVIAESR 97
>sp|Q8SRP1|RL36_ENCCU 60S ribosomal protein L36 OS=Encephalitozoon cuniculi (strain
GB-M1) GN=RPL36 PE=1 SV=1
Length = 107
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 29 VIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREEMSNVL 80
V E++G + +K LL+ + + K+ +K+LG+HKRA K E+++ +L
Sbjct: 53 VADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEKLARML 104
>sp|B0R0T1|VWA8_DANRE von Willebrand factor A domain-containing protein 8 OS=Danio rerio
GN=si:dkey-18l1.1 PE=4 SV=1
Length = 1896
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 28/66 (42%)
Query: 28 NVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLGAHKRAKMKREEMSNVLRWTRATG 87
NV+R V F SY K + ++L K + + K H ++ + WT + G
Sbjct: 988 NVVRNVFDFDSYNKDMREVLISALHKHGIPIGAKPTSVHLAKELPLPDCKMTGYWTISQG 1047
Query: 88 GEEKTK 93
G + K
Sbjct: 1048 GNTRRK 1053
>sp|Q4P6V4|RPIA_USTMA Ribose-5-phosphate isomerase OS=Ustilago maydis (strain 521 / FGSC
9021) GN=RKI1 PE=3 SV=1
Length = 286
Score = 28.9 bits (63), Expect = 9.3, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 16 KGKTSKGVDFERNVIREVAGFASYKKGINKLLKVGKDKRTLKVAKKKLG 64
K + G + + V EVA FA Y K + L K+G DK L++ K K G
Sbjct: 157 KNGSQLGTKWLQGVPIEVAPFA-YAKVLQNLKKMGSDKAVLRMGKAKAG 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.354
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,618,147
Number of Sequences: 539616
Number of extensions: 1105734
Number of successful extensions: 3190
Number of sequences better than 100.0: 49
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3151
Number of HSP's gapped (non-prelim): 49
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)