Query 035915
Match_columns 344
No_of_seqs 217 out of 1593
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 07:36:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035915.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035915hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0520 csdA Selenocysteine ly 100.0 1.7E-38 3.8E-43 317.9 20.9 196 131-335 37-244 (405)
2 COG1104 NifS Cysteine sulfinat 100.0 6.9E-38 1.5E-42 309.5 18.9 190 132-333 17-220 (386)
3 KOG1549 Cysteine desulfurase N 100.0 1.1E-36 2.4E-41 302.8 17.9 197 122-330 49-257 (428)
4 PLN02724 Molybdenum cofactor s 100.0 1E-35 2.2E-40 319.7 20.9 231 66-334 21-281 (805)
5 PF00266 Aminotran_5: Aminotra 100.0 8.5E-30 1.8E-34 248.5 17.7 195 131-335 14-220 (371)
6 PRK09295 bifunctional cysteine 100.0 1.2E-28 2.5E-33 243.8 20.7 193 131-334 38-244 (406)
7 PLN02651 cysteine desulfurase 100.0 8.8E-28 1.9E-32 234.4 21.4 193 131-335 14-219 (364)
8 PRK10874 cysteine sulfinate de 100.0 1.4E-27 3.1E-32 235.1 21.2 193 132-335 35-241 (401)
9 TIGR03392 FeS_syn_CsdA cystein 100.0 8.5E-27 1.8E-31 229.4 20.9 194 131-335 31-238 (398)
10 PLN02855 Bifunctional selenocy 99.9 9.3E-27 2E-31 231.7 21.4 194 132-335 48-254 (424)
11 TIGR03402 FeS_nifS cysteine de 99.9 6.6E-26 1.4E-30 221.4 21.0 189 131-332 14-214 (379)
12 TIGR01979 sufS cysteine desulf 99.9 1E-25 2.2E-30 221.5 20.7 192 132-334 34-239 (403)
13 TIGR03403 nifS_epsilon cystein 99.9 2E-25 4.3E-30 218.6 21.3 190 131-332 14-218 (382)
14 TIGR01814 kynureninase kynuren 99.9 2.9E-25 6.3E-30 220.1 19.8 167 157-333 71-250 (406)
15 TIGR02006 IscS cysteine desulf 99.9 5.5E-25 1.2E-29 217.9 21.5 172 151-334 42-222 (402)
16 TIGR03235 DNA_S_dndA cysteine 99.9 1.1E-24 2.4E-29 210.9 20.7 191 131-333 13-217 (353)
17 PRK02948 cysteine desulfurase; 99.9 5.3E-24 1.2E-28 208.2 20.5 171 150-332 37-216 (381)
18 PRK14012 cysteine desulfurase; 99.9 5.6E-24 1.2E-28 210.6 20.6 170 153-334 46-224 (404)
19 TIGR01977 am_tr_V_EF2568 cyste 99.9 1E-23 2.2E-28 204.6 21.9 169 154-332 42-216 (376)
20 PRK03080 phosphoserine aminotr 99.9 1.8E-24 3.9E-29 213.7 15.3 165 153-335 45-214 (378)
21 TIGR02326 transamin_PhnW 2-ami 99.9 7.5E-24 1.6E-28 205.9 19.1 174 153-334 32-210 (363)
22 TIGR01788 Glu-decarb-GAD gluta 99.9 6E-24 1.3E-28 214.7 16.6 177 145-331 70-277 (431)
23 PRK02769 histidine decarboxyla 99.9 1.6E-23 3.6E-28 208.3 18.6 177 151-335 60-251 (380)
24 TIGR01976 am_tr_V_VC1184 cyste 99.9 3.9E-23 8.4E-28 202.6 20.5 170 154-334 58-235 (397)
25 PLN02409 serine--glyoxylate am 99.9 3.3E-23 7.2E-28 205.9 20.2 179 151-335 37-221 (401)
26 PLN03032 serine decarboxylase; 99.9 1.5E-22 3.2E-27 201.4 18.1 177 150-334 60-253 (374)
27 cd06453 SufS_like Cysteine des 99.9 3.4E-22 7.4E-27 194.1 19.6 197 127-335 11-220 (373)
28 cd00611 PSAT_like Phosphoserin 99.9 3E-23 6.6E-28 203.1 9.8 164 153-335 41-212 (355)
29 cd06451 AGAT_like Alanine-glyo 99.9 1.7E-21 3.7E-26 188.1 18.4 173 153-334 29-205 (356)
30 PRK13479 2-aminoethylphosphona 99.9 4.5E-21 9.8E-26 186.4 19.7 172 156-334 37-212 (368)
31 PTZ00094 serine hydroxymethylt 99.9 7E-21 1.5E-25 192.5 15.6 173 149-333 72-262 (452)
32 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.2E-20 4.8E-25 184.5 18.2 175 151-335 58-240 (387)
33 TIGR03301 PhnW-AepZ 2-aminoeth 99.8 5.9E-20 1.3E-24 175.8 18.7 173 156-335 31-207 (355)
34 TIGR01366 serC_3 phosphoserine 99.8 3.4E-20 7.3E-25 182.6 13.6 165 151-335 36-205 (361)
35 PLN02414 glycine dehydrogenase 99.8 1E-19 2.2E-24 198.8 16.6 168 156-334 568-753 (993)
36 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 1.3E-18 2.8E-23 169.5 18.3 195 132-335 14-221 (361)
37 PRK13520 L-tyrosine decarboxyl 99.8 2E-18 4.4E-23 167.1 17.6 165 155-331 58-236 (371)
38 TIGR01364 serC_1 phosphoserine 99.8 7.1E-19 1.5E-23 172.9 12.3 158 155-335 36-204 (349)
39 PRK08134 O-acetylhomoserine am 99.8 5.4E-18 1.2E-22 171.5 18.7 158 152-329 60-225 (433)
40 PRK05355 3-phosphoserine/phosp 99.8 3.5E-19 7.6E-24 175.6 7.8 161 154-335 46-215 (360)
41 cd01494 AAT_I Aspartate aminot 99.8 2.6E-17 5.5E-22 139.7 16.9 160 158-329 2-170 (170)
42 cd06450 DOPA_deC_like DOPA dec 99.8 4.5E-18 9.7E-23 163.1 12.5 172 153-329 35-230 (345)
43 TIGR03812 tyr_de_CO2_Arch tyro 99.7 6.4E-17 1.4E-21 156.9 18.9 165 155-330 58-240 (373)
44 TIGR02539 SepCysS Sep-tRNA:Cys 99.7 3.4E-16 7.4E-21 153.8 20.5 171 156-335 51-228 (370)
45 TIGR03799 NOD_PanD_pyr putativ 99.7 1.4E-16 3.1E-21 164.7 18.6 187 139-331 110-349 (522)
46 TIGR01437 selA_rel uncharacter 99.7 1.3E-16 2.9E-21 157.2 16.5 186 122-334 20-227 (363)
47 cd00613 GDC-P Glycine cleavage 99.7 3.7E-16 8.1E-21 153.1 16.4 171 154-335 62-245 (398)
48 COG0075 Serine-pyruvate aminot 99.7 1.3E-15 2.7E-20 151.9 19.0 196 132-335 14-213 (383)
49 TIGR00474 selA seryl-tRNA(sec) 99.7 2.7E-15 5.8E-20 152.9 16.6 163 155-334 121-306 (454)
50 PRK00451 glycine dehydrogenase 99.6 2E-15 4.3E-20 151.5 15.1 169 154-335 110-289 (447)
51 PRK00011 glyA serine hydroxyme 99.6 1.4E-15 3.1E-20 150.9 13.6 170 151-333 65-246 (416)
52 PRK05613 O-acetylhomoserine am 99.6 3.5E-15 7.6E-20 151.3 16.5 162 150-329 63-231 (437)
53 PRK04311 selenocysteine syntha 99.6 6.2E-15 1.3E-19 150.6 17.0 164 154-334 125-311 (464)
54 TIGR01329 cysta_beta_ly_E cyst 99.6 1.1E-14 2.3E-19 144.7 17.6 156 157-332 48-211 (378)
55 PRK08114 cystathionine beta-ly 99.6 1.5E-14 3.2E-19 145.2 18.6 162 151-331 57-228 (395)
56 cd00615 Orn_deC_like Ornithine 99.6 5.2E-15 1.1E-19 141.2 14.2 167 156-332 59-237 (294)
57 cd00616 AHBA_syn 3-amino-5-hyd 99.6 4E-14 8.7E-19 135.9 19.0 159 157-330 19-182 (352)
58 PRK04366 glycine dehydrogenase 99.6 2.5E-14 5.5E-19 146.3 18.1 169 154-334 111-295 (481)
59 TIGR01822 2am3keto_CoA 2-amino 99.6 3.7E-14 7.9E-19 139.0 17.3 185 131-334 57-258 (393)
60 cd00378 SHMT Serine-glycine hy 99.6 1.4E-14 2.9E-19 142.7 14.0 168 150-330 58-238 (402)
61 PRK08064 cystathionine beta-ly 99.6 4.5E-14 9.7E-19 140.7 17.2 161 150-330 48-216 (390)
62 TIGR03588 PseC UDP-4-keto-6-de 99.6 4.1E-14 9E-19 139.2 16.5 160 157-328 30-197 (380)
63 PRK05937 8-amino-7-oxononanoat 99.6 1.5E-13 3.2E-18 135.2 17.4 161 154-330 54-226 (370)
64 PLN02271 serine hydroxymethylt 99.6 1.2E-13 2.7E-18 143.2 17.4 167 157-332 195-377 (586)
65 PRK11658 UDP-4-amino-4-deoxy-L 99.5 4E-13 8.6E-18 133.0 20.1 176 134-329 15-194 (379)
66 cd06454 KBL_like KBL_like; thi 99.5 2E-13 4.3E-18 130.8 16.5 163 154-333 44-218 (349)
67 PLN02414 glycine dehydrogenase 99.5 1.3E-13 2.8E-18 151.3 16.8 159 155-334 147-318 (993)
68 PRK08248 O-acetylhomoserine am 99.5 3.2E-13 7E-18 136.7 18.3 156 156-330 64-226 (431)
69 PRK07812 O-acetylhomoserine am 99.5 3.2E-13 6.9E-18 137.1 18.2 159 155-331 68-233 (436)
70 PRK08133 O-succinylhomoserine 99.5 2.6E-13 5.6E-18 135.3 17.2 160 152-331 57-225 (390)
71 TIGR01324 cysta_beta_ly_B cyst 99.5 1.8E-13 3.9E-18 136.2 16.0 158 156-332 50-215 (377)
72 PRK05367 glycine dehydrogenase 99.5 1E-13 2.2E-18 152.0 15.0 159 156-334 121-290 (954)
73 PLN02880 tyrosine decarboxylas 99.5 3.3E-13 7.1E-18 138.8 17.2 176 151-330 117-322 (490)
74 PRK08861 cystathionine gamma-s 99.5 4.3E-13 9.3E-18 134.2 17.3 156 156-330 53-216 (388)
75 PRK05994 O-acetylhomoserine am 99.5 7.5E-13 1.6E-17 133.7 18.8 156 156-330 63-225 (427)
76 PRK07179 hypothetical protein; 99.5 6.4E-13 1.4E-17 131.9 17.7 155 157-333 100-267 (407)
77 TIGR01141 hisC histidinol-phos 99.5 3.1E-13 6.7E-18 130.3 14.2 163 159-334 57-230 (346)
78 PRK05367 glycine dehydrogenase 99.5 3.9E-13 8.6E-18 147.5 16.8 164 156-333 542-726 (954)
79 PLN03226 serine hydroxymethylt 99.5 8.3E-13 1.8E-17 135.4 17.9 173 150-333 73-263 (475)
80 PRK07503 methionine gamma-lyas 99.5 9.8E-13 2.1E-17 131.8 17.5 163 151-332 60-230 (403)
81 PRK09028 cystathionine beta-ly 99.5 9.1E-13 2E-17 132.2 16.4 155 157-330 62-224 (394)
82 PRK05939 hypothetical protein; 99.5 3.6E-12 7.7E-17 127.8 20.6 159 151-329 42-207 (397)
83 cd06502 TA_like Low-specificit 99.5 3.3E-13 7.2E-18 128.8 11.8 169 156-334 32-214 (338)
84 PLN02263 serine decarboxylase 99.5 3.2E-12 6.8E-17 130.8 19.6 172 154-333 131-319 (470)
85 TIGR01326 OAH_OAS_sulfhy OAH/O 99.5 2E-12 4.4E-17 130.0 17.9 160 152-331 53-220 (418)
86 TIGR02379 ECA_wecE TDP-4-keto- 99.5 4.3E-12 9.3E-17 126.1 19.4 159 157-330 32-196 (376)
87 cd00609 AAT_like Aspartate ami 99.5 2.2E-12 4.8E-17 121.9 16.2 163 157-330 37-220 (350)
88 PRK07811 cystathionine gamma-s 99.5 1.7E-12 3.7E-17 129.3 15.9 157 156-331 61-225 (388)
89 TIGR01365 serC_2 phosphoserine 99.5 1.1E-12 2.4E-17 130.9 14.5 182 135-335 19-205 (374)
90 PRK07504 O-succinylhomoserine 99.4 2.6E-12 5.6E-17 128.6 17.1 159 155-332 64-230 (398)
91 PLN02452 phosphoserine transam 99.4 3.8E-13 8.2E-18 133.7 10.9 166 151-335 47-219 (365)
92 PRK08776 cystathionine gamma-s 99.4 3.5E-12 7.7E-17 128.1 17.7 156 156-330 60-223 (405)
93 PRK08045 cystathionine gamma-s 99.4 3.7E-12 8E-17 127.1 17.2 156 156-330 52-215 (386)
94 TIGR02080 O_succ_thio_ly O-suc 99.4 4.5E-12 9.8E-17 126.3 17.5 156 156-330 51-214 (382)
95 PRK08574 cystathionine gamma-s 99.4 4E-12 8.7E-17 126.7 17.0 155 156-330 53-215 (385)
96 PRK08249 cystathionine gamma-s 99.4 7.7E-12 1.7E-16 125.3 18.7 163 150-331 58-228 (398)
97 PRK13580 serine hydroxymethylt 99.4 1.1E-12 2.5E-17 134.6 12.9 175 149-334 87-304 (493)
98 PLN02721 threonine aldolase 99.4 1.3E-12 2.7E-17 125.6 12.5 167 158-333 42-225 (353)
99 PRK06225 aspartate aminotransf 99.4 3.3E-12 7.2E-17 125.4 15.4 165 157-335 67-246 (380)
100 TIGR01325 O_suc_HS_sulf O-succ 99.4 4.1E-12 8.9E-17 126.1 16.0 161 153-332 51-219 (380)
101 COG3844 Kynureninase [Amino ac 99.4 4E-12 8.7E-17 123.7 15.0 199 120-335 38-249 (407)
102 PRK12566 glycine dehydrogenase 99.4 1.9E-12 4E-17 140.8 14.0 164 156-330 543-719 (954)
103 cd00614 CGS_like CGS_like: Cys 99.4 8.3E-12 1.8E-16 123.1 17.4 161 151-330 35-203 (369)
104 PRK06767 methionine gamma-lyas 99.4 4.7E-12 1E-16 125.9 15.8 160 156-334 61-228 (386)
105 PRK07050 cystathionine beta-ly 99.4 7.4E-12 1.6E-16 125.2 17.2 161 151-330 60-228 (394)
106 PRK06460 hypothetical protein; 99.4 4.1E-12 8.8E-17 126.1 15.3 165 150-333 39-211 (376)
107 TIGR01328 met_gam_lyase methio 99.4 6.4E-12 1.4E-16 125.5 16.1 160 155-333 58-225 (391)
108 PRK07810 O-succinylhomoserine 99.4 9.9E-12 2.1E-16 124.7 17.5 159 155-332 69-235 (403)
109 PRK05968 hypothetical protein; 99.4 9.3E-12 2E-16 124.1 16.9 158 156-333 63-228 (389)
110 TIGR00461 gcvP glycine dehydro 99.4 5.3E-12 1.1E-16 137.7 16.1 167 156-332 530-713 (939)
111 PRK06176 cystathionine gamma-s 99.4 1.5E-11 3.3E-16 122.4 17.5 157 154-330 48-212 (380)
112 PRK07582 cystathionine gamma-l 99.4 1.6E-11 3.4E-16 121.5 16.7 150 156-330 51-210 (366)
113 PLN02509 cystathionine beta-ly 99.4 2E-11 4.3E-16 125.0 17.6 156 157-332 134-297 (464)
114 COG0076 GadB Glutamate decarbo 99.4 1.5E-11 3.2E-16 125.8 16.5 194 132-331 75-292 (460)
115 PF00282 Pyridoxal_deC: Pyrido 99.4 2.5E-11 5.3E-16 120.9 17.6 197 131-332 52-279 (373)
116 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.4 3.3E-11 7.3E-16 118.9 18.3 156 158-330 33-195 (375)
117 PRK13034 serine hydroxymethylt 99.4 1.2E-11 2.6E-16 124.4 15.3 165 153-330 70-245 (416)
118 PRK02731 histidinol-phosphate 99.4 1.4E-11 2.9E-16 120.0 15.2 162 159-334 70-245 (367)
119 PF01041 DegT_DnrJ_EryC1: DegT 99.4 4.9E-11 1.1E-15 117.3 18.8 179 133-331 5-190 (363)
120 PRK13238 tnaA tryptophanase/L- 99.4 2.6E-11 5.7E-16 123.8 17.4 173 144-330 69-274 (460)
121 PRK06234 methionine gamma-lyas 99.3 2.3E-11 5E-16 121.7 16.3 160 156-334 64-233 (400)
122 PRK00950 histidinol-phosphate 99.3 1.8E-11 4E-16 118.7 13.9 162 159-333 72-242 (361)
123 PRK06084 O-acetylhomoserine am 99.3 4.1E-11 8.9E-16 121.2 16.6 159 152-329 54-219 (425)
124 TIGR00858 bioF 8-amino-7-oxono 99.3 5.9E-11 1.3E-15 113.7 16.8 160 156-333 61-233 (360)
125 PRK07908 hypothetical protein; 99.3 2.6E-11 5.7E-16 117.7 14.4 156 158-334 60-224 (349)
126 PRK08056 threonine-phosphate d 99.3 6E-11 1.3E-15 115.8 16.7 158 158-329 57-227 (356)
127 PRK08960 hypothetical protein; 99.3 4.3E-11 9.2E-16 118.0 15.6 165 158-334 71-254 (387)
128 PRK06836 aspartate aminotransf 99.3 8.7E-11 1.9E-15 116.4 17.2 165 157-332 74-262 (394)
129 PRK07671 cystathionine beta-ly 99.3 1.1E-10 2.4E-15 116.1 17.6 159 152-330 46-212 (377)
130 KOG2862 Alanine-glyoxylate ami 99.3 7.5E-11 1.6E-15 114.3 15.6 174 153-335 47-225 (385)
131 PRK08361 aspartate aminotransf 99.3 3.7E-11 8.1E-16 118.5 14.0 165 158-334 72-257 (391)
132 PRK06108 aspartate aminotransf 99.3 1.6E-10 3.5E-15 112.7 18.1 163 159-334 64-252 (382)
133 PLN02483 serine palmitoyltrans 99.3 1.1E-10 2.3E-15 120.1 17.1 187 132-335 121-329 (489)
134 PRK09105 putative aminotransfe 99.3 9.1E-11 2E-15 115.8 15.8 163 158-334 80-253 (370)
135 PRK05957 aspartate aminotransf 99.3 2.5E-10 5.4E-15 112.9 18.9 170 155-335 68-254 (389)
136 PLN02590 probable tyrosine dec 99.3 3E-10 6.5E-15 118.3 20.1 178 150-331 164-371 (539)
137 PRK06939 2-amino-3-ketobutyrat 99.3 1.8E-10 4E-15 112.4 16.8 162 156-334 87-262 (397)
138 TIGR03531 selenium_SpcS O-phos 99.2 5E-10 1.1E-14 114.2 19.9 171 154-331 103-289 (444)
139 PRK15407 lipopolysaccharide bi 99.2 3.4E-10 7.4E-15 114.9 18.2 160 158-333 65-238 (438)
140 PRK05958 8-amino-7-oxononanoat 99.2 4.1E-10 8.9E-15 109.3 17.9 159 155-332 83-254 (385)
141 PRK14807 histidinol-phosphate 99.2 2E-10 4.3E-15 112.0 15.4 166 158-334 61-233 (351)
142 PLN02242 methionine gamma-lyas 99.2 1.4E-10 3E-15 117.1 14.7 165 150-333 70-243 (418)
143 TIGR03537 DapC succinyldiamino 99.2 5E-10 1.1E-14 109.0 18.2 165 159-334 39-226 (350)
144 PRK05764 aspartate aminotransf 99.2 3.1E-10 6.7E-15 111.5 16.7 165 158-334 70-258 (393)
145 PRK12462 phosphoserine aminotr 99.2 1.9E-10 4.1E-15 114.6 14.4 166 151-335 44-217 (364)
146 PRK07337 aminotransferase; Val 99.2 2.7E-10 5.9E-15 112.2 15.4 165 158-334 69-252 (388)
147 PRK03158 histidinol-phosphate 99.2 1.8E-10 4E-15 112.0 13.6 164 157-334 65-242 (359)
148 PRK07324 transaminase; Validat 99.2 3.2E-10 7E-15 111.8 15.3 166 158-334 64-242 (373)
149 TIGR01140 L_thr_O3P_dcar L-thr 99.2 1.3E-10 2.8E-15 112.5 12.2 153 159-334 50-214 (330)
150 PRK06434 cystathionine gamma-l 99.2 4.6E-10 9.9E-15 112.4 16.3 152 157-330 65-224 (384)
151 PRK08912 hypothetical protein; 99.2 1.1E-09 2.4E-14 107.8 18.9 165 159-334 66-252 (387)
152 TIGR03540 DapC_direct LL-diami 99.2 5.2E-10 1.1E-14 109.9 16.4 166 158-334 69-257 (383)
153 TIGR01825 gly_Cac_T_rel pyrido 99.2 4.6E-10 1E-14 109.7 16.0 161 155-334 77-250 (385)
154 PRK03321 putative aminotransfe 99.2 1.9E-10 4.1E-15 111.5 12.7 166 157-334 58-236 (352)
155 PRK05387 histidinol-phosphate 99.2 4.1E-10 9E-15 108.9 14.9 160 159-334 63-230 (353)
156 COG1103 Archaea-specific pyrid 99.2 6E-10 1.3E-14 106.6 15.2 195 132-335 30-238 (382)
157 PRK04635 histidinol-phosphate 99.2 1.1E-10 2.4E-15 113.9 10.2 161 159-334 63-234 (354)
158 PRK07269 cystathionine gamma-s 99.2 9.8E-10 2.1E-14 109.0 16.9 156 153-330 51-214 (364)
159 PRK09265 aminotransferase AlaT 99.2 1.6E-09 3.4E-14 107.6 17.6 159 159-329 75-255 (404)
160 PRK07681 aspartate aminotransf 99.1 1.2E-09 2.6E-14 108.3 16.5 166 158-334 71-259 (399)
161 PLN03026 histidinol-phosphate 99.1 6.1E-10 1.3E-14 110.2 14.3 164 158-333 88-259 (380)
162 PRK05967 cystathionine beta-ly 99.1 1.2E-09 2.6E-14 109.9 16.3 158 152-330 60-227 (395)
163 PRK12414 putative aminotransfe 99.1 3.4E-09 7.4E-14 104.7 19.1 167 157-334 71-255 (384)
164 PRK05166 histidinol-phosphate 99.1 1.3E-09 2.8E-14 107.1 15.9 158 160-329 75-246 (371)
165 PRK05942 aspartate aminotransf 99.1 7.3E-10 1.6E-14 109.7 13.8 165 159-334 76-263 (394)
166 PRK07309 aromatic amino acid a 99.1 4.7E-09 1E-13 103.9 19.2 170 158-335 69-258 (391)
167 PRK09276 LL-diaminopimelate am 99.1 1.3E-09 2.9E-14 107.0 15.0 166 158-334 71-259 (385)
168 PRK08247 cystathionine gamma-s 99.1 3.3E-09 7.1E-14 104.8 17.7 154 156-329 52-213 (366)
169 PRK09082 methionine aminotrans 99.1 2.9E-09 6.4E-14 105.1 16.7 168 157-334 72-256 (386)
170 KOG2142 Molybdenum cofactor su 99.1 3.1E-11 6.6E-16 125.4 2.5 171 161-333 181-363 (728)
171 PRK07568 aspartate aminotransf 99.1 4.8E-09 1E-13 103.2 17.9 161 158-329 68-250 (397)
172 TIGR01265 tyr_nico_aTase tyros 99.1 3.6E-09 7.8E-14 105.2 17.0 162 157-329 74-256 (403)
173 PRK13392 5-aminolevulinate syn 99.1 3E-09 6.4E-14 105.9 16.2 160 157-334 92-265 (410)
174 PRK08363 alanine aminotransfer 99.1 4.4E-09 9.5E-14 104.1 17.0 159 158-328 72-251 (398)
175 PRK04870 histidinol-phosphate 99.1 1.4E-09 2.9E-14 105.9 12.9 166 158-334 65-237 (356)
176 TIGR02618 tyr_phenol_ly tyrosi 99.1 5.9E-09 1.3E-13 106.3 17.9 182 132-328 49-264 (450)
177 PRK07683 aminotransferase A; V 99.1 5.3E-09 1.2E-13 103.4 16.4 165 158-334 67-253 (387)
178 PRK07550 hypothetical protein; 99.0 1.2E-08 2.6E-13 100.5 18.3 165 159-334 70-256 (386)
179 PF01212 Beta_elim_lyase: Beta 99.0 6.1E-10 1.3E-14 107.7 9.0 188 133-333 9-212 (290)
180 cd00617 Tnase_like Tryptophana 99.0 6.8E-09 1.5E-13 105.6 16.7 177 139-330 39-249 (431)
181 PRK07777 aminotransferase; Val 99.0 1.7E-08 3.7E-13 99.4 19.1 164 160-334 65-252 (387)
182 PRK07682 hypothetical protein; 99.0 3.4E-09 7.4E-14 103.9 14.1 166 158-335 59-247 (378)
183 PRK06702 O-acetylhomoserine am 99.0 1E-08 2.2E-13 104.4 17.8 155 156-328 61-222 (432)
184 PRK13393 5-aminolevulinate syn 99.0 9.9E-09 2.1E-13 102.1 17.2 157 157-331 91-261 (406)
185 TIGR01821 5aminolev_synth 5-am 99.0 1.3E-08 2.8E-13 100.9 17.9 195 119-332 53-262 (402)
186 PRK09064 5-aminolevulinate syn 99.0 1.2E-08 2.6E-13 101.1 17.4 162 155-333 90-264 (407)
187 PLN00175 aminotransferase fami 99.0 2.2E-08 4.7E-13 100.4 19.4 164 160-334 95-279 (413)
188 PRK03967 histidinol-phosphate 99.0 3.8E-09 8.2E-14 102.7 13.4 163 157-334 56-224 (337)
189 PRK13355 bifunctional HTH-doma 99.0 8.1E-09 1.8E-13 106.4 16.1 160 158-329 187-368 (517)
190 PRK13237 tyrosine phenol-lyase 99.0 2.1E-08 4.5E-13 102.6 18.6 178 139-330 64-274 (460)
191 PRK06207 aspartate aminotransf 99.0 1.9E-08 4E-13 100.5 17.0 165 159-334 85-271 (405)
192 PRK01688 histidinol-phosphate 99.0 3.6E-09 7.9E-14 103.4 11.3 162 159-334 60-233 (351)
193 PF00464 SHMT: Serine hydroxym 98.9 6.1E-09 1.3E-13 104.9 12.1 164 156-329 66-245 (399)
194 PLN02656 tyrosine transaminase 98.9 3.4E-08 7.4E-13 98.6 16.9 161 158-329 75-256 (409)
195 COG0399 WecE Predicted pyridox 98.9 8.9E-08 1.9E-12 95.8 19.5 180 131-330 13-197 (374)
196 TIGR01264 tyr_amTase_E tyrosin 98.9 4E-08 8.7E-13 97.4 16.8 162 158-330 75-256 (401)
197 TIGR03576 pyridox_MJ0158 pyrid 98.9 3E-08 6.4E-13 97.8 15.7 158 156-334 54-222 (346)
198 PLN02822 serine palmitoyltrans 98.9 4.8E-08 1E-12 100.4 17.7 165 155-335 153-334 (481)
199 PTZ00433 tyrosine aminotransfe 98.9 5.6E-08 1.2E-12 97.0 17.2 160 158-328 77-263 (412)
200 PF00155 Aminotran_1_2: Aminot 98.9 2.5E-08 5.4E-13 96.4 13.8 171 157-334 45-241 (363)
201 TIGR03811 tyr_de_CO2_Ent tyros 98.9 4.6E-08 1E-12 103.4 16.8 195 131-332 95-400 (608)
202 PRK03317 histidinol-phosphate 98.9 1.9E-08 4.2E-13 98.4 12.9 165 158-334 67-248 (368)
203 PLN03227 serine palmitoyltrans 98.9 1.2E-07 2.6E-12 94.7 17.8 163 157-333 44-226 (392)
204 PLN00145 tyrosine/nicotianamin 98.9 1.2E-07 2.5E-12 95.9 17.4 161 157-328 95-276 (430)
205 PRK06290 aspartate aminotransf 98.8 9.1E-08 2E-12 96.1 16.4 165 158-334 83-271 (410)
206 PRK04781 histidinol-phosphate 98.8 7.4E-08 1.6E-12 94.8 15.3 167 158-334 61-240 (364)
207 PLN02187 rooty/superroot1 98.8 1.3E-07 2.8E-12 96.6 17.4 161 158-329 110-291 (462)
208 PLN02376 1-aminocyclopropane-1 98.8 9E-08 2E-12 98.8 16.4 169 158-331 96-296 (496)
209 PRK06107 aspartate aminotransf 98.8 1.6E-07 3.5E-12 93.4 17.6 163 159-334 77-261 (402)
210 PRK06348 aspartate aminotransf 98.8 1.1E-07 2.4E-12 93.9 15.6 163 160-333 70-253 (384)
211 cd00610 OAT_like Acetyl ornith 98.8 7.6E-08 1.6E-12 94.8 14.4 174 154-334 77-279 (413)
212 PRK01533 histidinol-phosphate 98.8 3.4E-08 7.5E-13 97.5 11.9 162 158-333 66-241 (366)
213 COG2008 GLY1 Threonine aldolas 98.8 7.8E-08 1.7E-12 94.8 13.7 161 156-328 35-211 (342)
214 PRK08153 histidinol-phosphate 98.8 6.6E-08 1.4E-12 95.2 13.1 163 158-333 69-242 (369)
215 PRK09148 aminotransferase; Val 98.8 1.3E-07 2.7E-12 94.4 15.3 166 159-334 71-258 (405)
216 TIGR03538 DapC_gpp succinyldia 98.8 1.3E-07 2.9E-12 93.4 14.4 166 159-334 67-264 (393)
217 PF01276 OKR_DC_1: Orn/Lys/Arg 98.8 1.1E-07 2.3E-12 96.5 13.8 170 155-332 65-257 (417)
218 PRK10534 L-threonine aldolase; 98.8 5E-08 1.1E-12 93.8 10.8 166 157-333 35-214 (333)
219 PRK08175 aminotransferase; Val 98.8 2.4E-07 5.2E-12 91.8 15.9 167 158-334 69-257 (395)
220 PRK06358 threonine-phosphate d 98.8 2.9E-07 6.3E-12 90.2 16.2 159 158-329 56-228 (354)
221 PRK07049 methionine gamma-lyas 98.7 4.8E-07 1E-11 91.8 17.4 162 157-332 84-260 (427)
222 PRK14809 histidinol-phosphate 98.7 2E-07 4.2E-12 91.0 13.9 164 158-334 67-242 (357)
223 PLN00143 tyrosine/nicotianamin 98.7 5.4E-07 1.2E-11 90.1 17.1 160 159-329 77-257 (409)
224 COG1932 SerC Phosphoserine ami 98.7 1.2E-07 2.6E-12 93.8 11.9 193 122-335 9-219 (365)
225 TIGR03539 DapC_actino succinyl 98.7 2.1E-07 4.5E-12 91.0 13.6 152 161-334 61-237 (357)
226 KOG2142 Molybdenum cofactor su 98.7 6E-09 1.3E-13 108.6 1.9 198 122-333 27-241 (728)
227 PF01053 Cys_Met_Meta_PP: Cys/ 98.7 2.1E-06 4.5E-11 86.4 20.0 161 149-330 48-219 (386)
228 PRK08068 transaminase; Reviewe 98.7 5.8E-07 1.3E-11 88.8 15.9 166 158-334 72-260 (389)
229 COG1921 SelA Selenocysteine sy 98.7 2.1E-07 4.5E-12 93.4 12.0 156 167-335 76-242 (395)
230 PRK09147 succinyldiaminopimela 98.6 7.6E-07 1.6E-11 88.2 15.3 166 159-334 68-265 (396)
231 PRK07366 succinyldiaminopimela 98.6 1E-06 2.2E-11 86.9 15.2 166 159-334 71-259 (388)
232 PRK07865 N-succinyldiaminopime 98.6 5.8E-07 1.3E-11 87.9 13.1 154 160-334 66-243 (364)
233 PRK02610 histidinol-phosphate 98.6 1.1E-06 2.5E-11 86.5 14.5 170 158-334 68-254 (374)
234 PTZ00377 alanine aminotransfer 98.6 8.9E-07 1.9E-11 90.6 13.7 168 157-328 116-314 (481)
235 PLN02607 1-aminocyclopropane-1 98.5 3.8E-06 8.2E-11 85.7 17.4 167 158-330 97-295 (447)
236 PRK15481 transcriptional regul 98.5 2.7E-06 5.9E-11 85.4 15.7 161 159-333 124-300 (431)
237 COG2873 MET17 O-acetylhomoseri 98.5 7.2E-06 1.6E-10 81.8 17.2 160 157-335 63-229 (426)
238 KOG3846 L-kynurenine hydrolase 98.5 3.8E-07 8.2E-12 89.0 7.9 171 159-335 114-297 (465)
239 PRK07392 threonine-phosphate d 98.5 2.2E-06 4.7E-11 83.9 13.3 161 159-333 60-235 (360)
240 PRK08636 aspartate aminotransf 98.5 6.4E-06 1.4E-10 82.0 16.3 169 159-334 74-268 (403)
241 PTZ00125 ornithine aminotransf 98.4 4.9E-06 1.1E-10 82.2 15.2 163 155-335 72-268 (400)
242 PRK00854 rocD ornithine--oxo-a 98.4 8.1E-06 1.7E-10 80.9 16.7 161 155-334 82-276 (401)
243 PRK15029 arginine decarboxylas 98.4 6.1E-06 1.3E-10 89.3 16.9 168 156-331 205-402 (755)
244 PRK06425 histidinol-phosphate 98.4 3.4E-06 7.3E-11 81.8 13.3 159 158-334 42-213 (332)
245 PF03841 SelA: L-seryl-tRNA se 98.4 1.2E-07 2.5E-12 94.4 2.9 162 157-335 48-232 (367)
246 PLN02450 1-aminocyclopropane-1 98.4 8E-06 1.7E-10 83.6 16.2 168 159-331 89-289 (468)
247 PRK14808 histidinol-phosphate 98.4 4.7E-06 1E-10 81.3 13.4 155 158-334 58-222 (335)
248 PRK06855 aminotransferase; Val 98.4 1.5E-05 3.2E-10 80.6 17.3 162 158-328 75-257 (433)
249 COG1167 ARO8 Transcriptional r 98.4 1E-05 2.2E-10 82.9 15.2 152 171-334 153-318 (459)
250 PRK03244 argD acetylornithine 98.3 7.7E-06 1.7E-10 81.0 13.9 160 158-334 87-271 (398)
251 PRK07505 hypothetical protein; 98.3 3E-05 6.5E-10 77.2 17.8 157 152-328 87-262 (402)
252 TIGR00461 gcvP glycine dehydro 98.3 1.1E-05 2.4E-10 89.0 15.3 156 157-334 110-278 (939)
253 KOG1368 Threonine aldolase [Am 98.3 2.1E-06 4.6E-11 83.5 8.6 167 161-335 61-244 (384)
254 COG0156 BioF 7-keto-8-aminopel 98.3 3.7E-05 7.9E-10 77.6 17.4 183 131-330 58-254 (388)
255 TIGR03542 DAPAT_plant LL-diami 98.3 1.5E-05 3.2E-10 79.4 14.5 160 158-333 77-265 (402)
256 TIGR00707 argD acetylornithine 98.2 2.3E-05 5E-10 76.5 14.2 167 155-335 68-259 (379)
257 PRK09257 aromatic amino acid a 98.2 4.5E-05 9.7E-10 75.7 16.4 163 158-328 71-260 (396)
258 PRK05664 threonine-phosphate d 98.2 3.8E-05 8.3E-10 74.5 15.2 150 159-334 52-212 (330)
259 COG0112 GlyA Glycine/serine hy 98.2 8.5E-06 1.9E-10 81.6 10.7 168 149-330 64-243 (413)
260 PRK08354 putative aminotransfe 98.2 5.9E-05 1.3E-09 72.5 16.2 145 159-328 43-196 (311)
261 TIGR02617 tnaA_trp_ase tryptop 98.2 1.9E-05 4.2E-10 80.8 12.9 182 140-331 61-281 (467)
262 PLN02368 alanine transaminase 98.2 3.3E-05 7.2E-10 78.0 14.5 166 158-328 109-306 (407)
263 PRK05839 hypothetical protein; 98.2 7.8E-05 1.7E-09 73.6 16.7 162 160-334 64-252 (374)
264 KOG0259 Tyrosine aminotransfer 98.2 5.5E-05 1.2E-09 75.7 15.3 187 129-329 81-286 (447)
265 PRK04073 rocD ornithine--oxo-a 98.2 4.3E-05 9.2E-10 76.0 14.6 161 156-335 82-276 (396)
266 PRK08637 hypothetical protein; 98.1 0.00011 2.3E-09 72.9 17.0 168 158-329 46-242 (388)
267 PRK07590 L,L-diaminopimelate a 98.1 6.7E-05 1.4E-09 74.9 15.2 160 158-334 78-269 (409)
268 PRK13578 ornithine decarboxyla 98.1 6.2E-05 1.3E-09 81.2 15.5 169 156-332 174-372 (720)
269 COG0436 Aspartate/tyrosine/aro 98.1 0.00016 3.5E-09 72.8 17.6 161 159-329 72-251 (393)
270 PRK09440 avtA valine--pyruvate 98.1 2.9E-05 6.2E-10 77.4 11.7 162 159-334 77-268 (416)
271 PRK06959 putative threonine-ph 98.1 8.6E-05 1.9E-09 72.6 14.6 153 159-334 56-218 (339)
272 PLN02231 alanine transaminase 98.0 0.0001 2.2E-09 77.1 15.3 168 157-328 169-366 (534)
273 PLN02955 8-amino-7-oxononanoat 98.0 0.00046 1E-08 71.4 18.3 157 157-331 148-333 (476)
274 KOG1383 Glutamate decarboxylas 98.0 0.00013 2.9E-09 74.4 13.7 166 157-330 121-304 (491)
275 KOG0053 Cystathionine beta-lya 98.0 0.00019 4.2E-09 72.6 14.7 153 158-329 79-239 (409)
276 PRK01278 argD acetylornithine 98.0 0.00024 5.3E-09 70.2 15.3 163 156-335 73-264 (389)
277 PRK02627 acetylornithine amino 97.9 0.0002 4.4E-09 70.4 14.1 163 156-334 81-270 (396)
278 PRK15399 lysine decarboxylase 97.9 0.00052 1.1E-08 74.1 17.8 165 156-331 195-383 (713)
279 PRK15400 lysine decarboxylase 97.9 0.00023 4.9E-09 76.8 14.5 165 156-331 195-383 (714)
280 COG1003 GcvP Glycine cleavage 97.8 0.00029 6.2E-09 71.7 12.2 160 155-332 108-289 (496)
281 COG0079 HisC Histidinol-phosph 97.8 0.00065 1.4E-08 67.8 14.7 163 157-334 58-232 (356)
282 PF06838 Met_gamma_lyase: Meth 97.7 0.00027 5.8E-09 70.8 11.3 162 161-337 59-246 (403)
283 TIGR03801 asp_4_decarbox aspar 97.7 0.0025 5.3E-08 66.8 18.4 148 177-331 157-327 (521)
284 KOG0257 Kynurenine aminotransf 97.7 0.00073 1.6E-08 68.3 13.6 190 131-330 48-261 (420)
285 PRK03715 argD acetylornithine 97.7 0.001 2.2E-08 66.8 14.5 148 177-333 95-266 (395)
286 PTZ00376 aspartate aminotransf 97.6 0.0011 2.3E-08 66.3 13.6 162 158-327 74-264 (404)
287 COG1982 LdcC Arginine/lysine/o 97.6 0.0019 4.1E-08 67.9 15.4 164 156-330 70-247 (557)
288 PLN02624 ornithine-delta-amino 97.5 0.0023 5E-08 65.9 15.4 164 155-334 116-313 (474)
289 COG1168 MalY Bifunctional PLP- 97.5 0.0044 9.6E-08 62.2 16.1 191 122-330 37-248 (388)
290 TIGR01885 Orn_aminotrans ornit 97.5 0.0055 1.2E-07 61.0 16.7 165 155-334 78-275 (401)
291 PRK09275 aspartate aminotransf 97.5 0.0025 5.3E-08 66.9 14.4 147 176-331 162-328 (527)
292 COG0626 MetC Cystathionine bet 97.4 0.0053 1.1E-07 62.3 16.1 149 160-328 67-224 (396)
293 PRK05964 adenosylmethionine--8 97.4 0.0018 3.9E-08 65.3 12.0 171 156-334 85-289 (423)
294 PLN02672 methionine S-methyltr 97.3 0.0048 1E-07 69.5 15.6 167 158-331 736-927 (1082)
295 KOG0629 Glutamate decarboxylas 97.3 0.0014 2.9E-08 66.8 9.7 195 130-332 113-338 (510)
296 PRK04260 acetylornithine amino 97.3 0.0047 1E-07 60.9 13.2 164 159-335 69-254 (375)
297 PRK05093 argD bifunctional N-s 97.2 0.012 2.7E-07 58.6 16.1 158 158-335 84-273 (403)
298 PRK02936 argD acetylornithine 97.2 0.0039 8.5E-08 61.2 12.3 158 161-335 72-256 (377)
299 PF02347 GDC-P: Glycine cleava 97.1 0.0096 2.1E-07 61.0 14.0 157 157-334 111-281 (429)
300 KOG0256 1-aminocyclopropane-1- 97.1 0.0024 5.3E-08 64.7 9.1 171 158-333 123-322 (471)
301 KOG1360 5-aminolevulinate synt 97.0 0.0076 1.7E-07 61.2 11.9 151 159-328 219-383 (570)
302 COG4100 Cystathionine beta-lya 97.0 0.0087 1.9E-07 58.9 11.7 142 165-315 74-234 (416)
303 KOG2790 Phosphoserine aminotra 97.0 0.0073 1.6E-07 59.0 10.7 190 122-335 11-224 (370)
304 TIGR03246 arg_catab_astC succi 96.9 0.041 8.8E-07 55.0 16.4 162 155-334 76-267 (397)
305 KOG2467 Glycine/serine hydroxy 96.8 0.015 3.2E-07 58.6 11.4 169 157-333 87-269 (477)
306 COG0403 GcvP Glycine cleavage 96.7 0.029 6.2E-07 57.3 13.0 156 157-333 121-294 (450)
307 TIGR02407 ectoine_ectB diamino 96.7 0.1 2.3E-06 52.6 17.2 89 239-332 178-281 (412)
308 PRK05769 4-aminobutyrate amino 96.6 0.11 2.3E-06 53.2 16.8 77 254-334 221-309 (441)
309 PRK09264 diaminobutyrate--2-ox 96.6 0.082 1.8E-06 53.6 15.8 91 238-332 181-285 (425)
310 PRK04013 argD acetylornithine/ 96.5 0.062 1.3E-06 53.8 14.3 186 122-332 38-247 (364)
311 TIGR00713 hemL glutamate-1-sem 96.5 0.03 6.5E-07 56.2 11.8 163 155-334 87-282 (423)
312 PF05889 SLA_LP_auto_ag: Solub 96.3 0.00066 1.4E-08 68.5 -1.2 173 159-337 59-254 (389)
313 KOG1357 Serine palmitoyltransf 96.3 0.028 6E-07 57.8 9.9 147 157-318 183-350 (519)
314 PLN02397 aspartate transaminas 96.3 0.11 2.4E-06 52.5 14.4 165 158-327 93-282 (423)
315 PRK06062 hypothetical protein; 96.2 0.16 3.4E-06 52.1 15.6 91 239-335 200-304 (451)
316 PF00202 Aminotran_3: Aminotra 96.2 0.016 3.4E-07 57.1 7.7 180 151-336 54-267 (339)
317 PRK11522 putrescine--2-oxoglut 96.2 0.15 3.1E-06 52.7 15.0 166 155-334 123-320 (459)
318 PRK06105 aminotransferase; Pro 96.0 0.13 2.8E-06 53.0 13.6 88 240-334 205-307 (460)
319 TIGR03372 putres_am_tran putre 95.9 0.23 4.9E-06 51.1 14.8 167 155-335 116-314 (442)
320 PRK08360 4-aminobutyrate amino 95.8 0.51 1.1E-05 48.3 16.8 77 254-335 204-293 (443)
321 PRK00062 glutamate-1-semialdeh 95.7 0.077 1.7E-06 53.7 10.6 167 156-334 90-284 (426)
322 PRK08117 4-aminobutyrate amino 95.7 0.34 7.5E-06 49.0 15.2 174 155-335 85-296 (433)
323 PLN02760 4-aminobutyrate:pyruv 95.7 0.21 4.5E-06 52.2 13.8 89 240-335 247-350 (504)
324 KOG0628 Aromatic-L-amino-acid/ 95.7 0.2 4.3E-06 51.9 13.0 260 38-331 15-319 (511)
325 PRK12566 glycine dehydrogenase 95.7 0.12 2.5E-06 57.9 12.2 152 157-333 125-291 (954)
326 PRK12381 bifunctional succinyl 95.6 0.8 1.7E-05 45.9 17.3 163 155-335 80-272 (406)
327 PF12897 Aminotran_MocR: Alani 95.5 0.35 7.5E-06 49.3 14.0 164 157-330 70-269 (425)
328 PRK12403 putative aminotransfe 95.3 0.28 6E-06 50.5 12.9 75 255-334 223-311 (460)
329 PRK06541 hypothetical protein; 95.1 0.34 7.3E-06 49.9 12.9 88 240-334 208-310 (460)
330 PRK13360 omega amino acid--pyr 95.1 0.43 9.3E-06 48.9 13.5 88 240-334 202-304 (442)
331 PRK12389 glutamate-1-semialdeh 95.0 0.58 1.3E-05 47.6 14.1 162 158-335 95-288 (428)
332 PRK09221 beta alanine--pyruvat 95.0 0.34 7.3E-06 49.7 12.4 89 240-334 205-307 (445)
333 PRK08593 4-aminobutyrate amino 94.8 1.9 4.1E-05 44.2 17.4 76 254-335 207-296 (445)
334 KOG2040 Glycine dehydrogenase 94.7 0.28 6.2E-06 52.8 11.1 161 158-332 584-765 (1001)
335 PLN02482 glutamate-1-semialdeh 94.5 0.77 1.7E-05 47.7 13.8 88 238-335 232-334 (474)
336 PRK07678 aminotransferase; Val 94.5 0.73 1.6E-05 47.3 13.5 86 242-334 202-302 (451)
337 PRK09792 4-aminobutyrate trans 94.5 2.3 4.9E-05 43.2 16.8 172 160-335 87-287 (421)
338 PRK06058 4-aminobutyrate amino 94.4 1.5 3.3E-05 44.7 15.5 78 255-335 220-308 (443)
339 PRK07480 putative aminotransfe 94.3 0.83 1.8E-05 47.0 13.3 73 257-335 223-309 (456)
340 COG4992 ArgD Ornithine/acetylo 94.2 0.64 1.4E-05 47.5 12.0 161 157-334 85-272 (404)
341 KOG0258 Alanine aminotransfera 94.2 0.49 1.1E-05 48.2 11.0 148 132-290 91-257 (475)
342 PRK07495 4-aminobutyrate amino 94.2 3.4 7.3E-05 42.1 17.4 175 157-335 84-287 (425)
343 KOG0634 Aromatic amino acid am 94.0 0.72 1.6E-05 47.5 12.0 112 175-291 124-247 (472)
344 PRK06082 4-aminobutyrate amino 93.8 2.1 4.5E-05 44.1 15.1 195 122-333 85-316 (459)
345 PRK07481 hypothetical protein; 93.6 1.3 2.9E-05 45.3 13.4 77 255-335 214-303 (449)
346 PLN00144 acetylornithine trans 93.5 1.9 4.2E-05 43.0 14.1 91 238-335 155-256 (382)
347 PRK07046 aminotransferase; Val 93.5 1.5 3.2E-05 45.2 13.5 161 156-335 115-305 (453)
348 PRK07036 hypothetical protein; 93.3 1.7 3.8E-05 44.8 13.7 75 254-334 220-310 (466)
349 PRK00615 glutamate-1-semialdeh 93.2 2.8 6.1E-05 42.9 15.0 88 238-335 187-289 (433)
350 PRK07482 hypothetical protein; 93.2 1.4 3E-05 45.5 12.6 91 239-334 206-309 (461)
351 COG0001 HemL Glutamate-1-semia 92.9 1.3 2.8E-05 45.6 11.8 159 157-335 95-288 (432)
352 PRK07030 adenosylmethionine--8 92.7 2.2 4.8E-05 44.1 13.4 88 240-334 202-304 (466)
353 PRK07483 hypothetical protein; 92.6 2.7 5.9E-05 43.1 13.8 90 240-335 186-290 (443)
354 PRK05965 hypothetical protein; 92.3 3.1 6.8E-05 42.8 13.9 91 240-335 202-305 (459)
355 PRK05639 4-aminobutyrate amino 92.0 4.9 0.00011 41.4 14.9 173 157-334 97-310 (457)
356 TIGR03251 LAT_fam L-lysine 6-t 91.6 7.1 0.00015 39.7 15.5 59 254-313 218-288 (431)
357 COG0160 GabT 4-aminobutyrate a 91.6 7.7 0.00017 40.3 15.7 210 122-341 70-316 (447)
358 PRK08088 4-aminobutyrate amino 91.4 1.9 4.2E-05 43.5 11.1 92 240-335 185-288 (425)
359 TIGR00699 GABAtrns_euk 4-amino 91.4 11 0.00023 39.3 16.6 72 239-315 238-323 (464)
360 TIGR00700 GABAtrnsam 4-aminobu 91.4 10 0.00022 38.3 16.2 93 240-335 183-286 (420)
361 KOG1359 Glycine C-acetyltransf 91.1 2.2 4.8E-05 42.4 10.5 165 131-320 86-268 (417)
362 PLN02994 1-aminocyclopropane-1 91.0 0.43 9.3E-06 42.3 5.1 43 159-204 95-145 (153)
363 PRK07986 adenosylmethionine--8 90.9 3.9 8.5E-05 41.8 12.8 90 239-334 191-294 (428)
364 COG3977 Alanine-alpha-ketoisov 90.5 3.8 8.3E-05 40.9 11.6 79 254-335 179-269 (417)
365 PRK06917 hypothetical protein; 89.9 11 0.00024 38.7 15.0 89 240-334 186-289 (447)
366 PRK06943 adenosylmethionine--8 89.5 6.3 0.00014 40.6 13.0 90 240-335 209-312 (453)
367 PRK06149 hypothetical protein; 89.2 22 0.00048 40.2 18.0 76 255-334 745-833 (972)
368 PRK05630 adenosylmethionine--8 89.1 4.7 0.0001 41.1 11.6 74 257-334 204-290 (422)
369 COG1448 TyrB Aspartate/tyrosin 88.8 3.4 7.4E-05 42.1 10.0 193 122-329 40-261 (396)
370 PRK06916 adenosylmethionine--8 88.6 5.2 0.00011 41.3 11.6 89 240-334 211-313 (460)
371 PRK04612 argD acetylornithine 88.5 14 0.00031 37.3 14.6 90 238-334 175-275 (408)
372 PRK06918 4-aminobutyrate amino 87.4 24 0.00051 36.1 15.5 78 255-335 220-308 (451)
373 PRK06173 adenosylmethionine--8 87.4 7.6 0.00016 39.7 11.8 89 239-334 193-296 (429)
374 PRK08742 adenosylmethionine--8 85.5 12 0.00026 38.8 12.3 88 240-334 224-326 (472)
375 PRK06777 4-aminobutyrate amino 85.4 37 0.00081 34.4 15.6 93 239-335 183-287 (421)
376 COG3033 TnaA Tryptophanase [Am 85.2 7.6 0.00017 39.7 10.1 185 136-332 62-284 (471)
377 KOG1401 Acetylornithine aminot 84.9 18 0.0004 37.3 12.8 169 158-337 100-297 (433)
378 PRK06148 hypothetical protein; 84.8 22 0.00047 40.6 14.8 71 261-335 792-874 (1013)
379 KOG1358 Serine palmitoyltransf 83.5 19 0.00041 37.1 12.2 143 159-315 142-305 (467)
380 PRK06938 diaminobutyrate--2-ox 81.0 73 0.0016 33.0 16.2 91 239-332 215-317 (464)
381 KOG2040 Glycine dehydrogenase 80.7 13 0.00028 40.7 10.2 147 158-324 165-316 (1001)
382 PRK06931 diaminobutyrate--2-ox 80.1 77 0.0017 32.7 15.7 71 258-332 230-311 (459)
383 TIGR00508 bioA adenosylmethion 78.9 40 0.00086 34.3 13.0 91 239-334 194-297 (427)
384 TIGR00709 dat 2,4-diaminobutyr 75.6 1E+02 0.0022 31.6 15.8 73 255-331 208-291 (442)
385 cd02067 B12-binding B12 bindin 63.4 40 0.00086 27.6 7.4 90 212-312 17-110 (119)
386 KOG0633 Histidinol phosphate a 63.1 68 0.0015 31.8 9.8 138 170-318 83-230 (375)
387 cd02069 methionine_synthase_B1 62.9 94 0.002 28.9 10.6 93 211-313 105-203 (213)
388 PRK06209 glutamate-1-semialdeh 56.4 31 0.00067 35.1 6.7 87 238-334 173-270 (431)
389 COG2075 RPL24A Ribosomal prote 49.1 12 0.00027 28.9 1.8 20 309-332 7-26 (66)
390 PRK02261 methylaspartate mutas 45.4 2E+02 0.0043 24.8 9.4 72 211-291 20-95 (137)
391 TIGR01501 MthylAspMutase methy 44.2 2E+02 0.0044 25.0 8.9 89 211-309 18-115 (134)
392 PRK08535 translation initiatio 40.0 3.7E+02 0.0081 26.4 11.8 114 157-286 102-227 (310)
393 PF02310 B12-binding: B12 bind 38.1 2.1E+02 0.0045 22.9 8.5 89 211-310 17-110 (121)
394 TIGR00511 ribulose_e2b2 ribose 37.7 4E+02 0.0087 26.1 11.9 115 156-286 96-222 (301)
395 PF15608 PELOTA_1: PELOTA RNA 37.3 1.3E+02 0.0029 25.1 6.3 64 160-230 23-88 (100)
396 cd02070 corrinoid_protein_B12- 37.3 1.8E+02 0.0038 26.4 7.9 89 211-313 99-193 (201)
397 KOG1405 4-aminobutyrate aminot 31.3 1.2E+02 0.0025 31.3 6.0 75 239-315 255-344 (484)
398 cd02072 Glm_B12_BD B12 binding 29.4 3.5E+02 0.0075 23.4 8.0 90 211-310 16-114 (128)
399 cd00472 Ribosomal_L24e_L24 Rib 29.2 29 0.00063 25.7 1.1 22 307-332 5-26 (54)
400 PF01246 Ribosomal_L24e: Ribos 28.6 24 0.00051 27.7 0.6 21 308-332 6-26 (71)
401 PF00128 Alpha-amylase: Alpha 27.3 47 0.001 30.6 2.4 25 266-290 49-74 (316)
402 TIGR02370 pyl_corrinoid methyl 26.5 3.4E+02 0.0073 24.7 7.8 89 211-313 101-195 (197)
403 PRK08335 translation initiatio 26.4 6.2E+02 0.013 24.7 12.5 115 156-286 90-216 (275)
404 COG1184 GCD2 Translation initi 26.3 6.6E+02 0.014 25.0 12.6 117 153-286 97-226 (301)
405 PLN02974 adenosylmethionine-8- 26.3 81 0.0018 35.4 4.3 75 257-335 588-675 (817)
406 PRK08297 L-lysine aminotransfe 26.2 1.3E+02 0.0029 30.8 5.6 82 240-331 213-306 (443)
407 PF01008 IF-2B: Initiation fac 24.8 4.4E+02 0.0095 24.9 8.6 116 157-286 89-215 (282)
408 KOG1404 Alanine-glyoxylate ami 23.4 2.6E+02 0.0056 29.1 6.9 68 265-335 225-301 (442)
409 KOG1402 Ornithine aminotransfe 23.4 2.2E+02 0.0047 29.2 6.2 162 155-332 100-294 (427)
410 TIGR02026 BchE magnesium-proto 23.2 3.3E+02 0.0072 28.3 8.0 89 213-310 27-121 (497)
411 PRK09441 cytoplasmic alpha-amy 22.6 64 0.0014 33.4 2.6 24 266-289 78-102 (479)
412 PF10937 DUF2638: Protein of u 22.3 40 0.00086 28.6 0.8 20 48-67 88-108 (112)
413 COG2871 NqrF Na+-transporting 22.2 46 0.001 33.2 1.3 29 54-82 310-340 (410)
414 smart00642 Aamy Alpha-amylase 21.1 81 0.0018 28.0 2.6 25 266-290 67-92 (166)
415 cd02071 MM_CoA_mut_B12_BD meth 20.7 4.9E+02 0.011 21.5 7.6 70 211-289 16-89 (122)
416 KOG1467 Translation initiation 20.4 7.1E+02 0.015 26.7 9.4 124 150-288 334-468 (556)
No 1
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.7e-38 Score=317.92 Aligned_cols=196 Identities=18% Similarity=0.143 Sum_probs=168.2
Q ss_pred cccchHHHHHHhhccC----CCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC--CCCCCeE-
Q 035915 131 RTQLEPSRLLDILTKK----SSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP--FFRGNFY- 203 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gn----ss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~--~~~Gd~i- 203 (344)
+|-..........+.| .+..+..++..++++|+.||+|+|+++. .+|+||+|+|+|+|+++.++. +.+||+|
T Consensus 37 ~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~-~eIvft~~tT~aln~va~~l~~~~~~gdeIv 115 (405)
T COG0520 37 AVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS-DEIVFTRGTTEALNLVARGLGRSLKPGDEIV 115 (405)
T ss_pred HHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC-CeEEEeCChhHHHHHHHHHhhhhhcCCCEEE
Confidence 4444444443334455 2345666777899999999999999862 289999999999999999997 7889985
Q ss_pred EEcCCcCHH--HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HH
Q 035915 204 MTIIGEELD--YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AH 278 (344)
Q Consensus 204 vS~~eH~~~--~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar 278 (344)
+|.+|||+| .|++++++.|++|+++|.+ .++.++.+++++.+++ +|+||+++++|| |+++|+++|.+ +|
T Consensus 116 ~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~-~~g~~~~~~~~~~i~~-----~Tklvais~vSn~tG~~~pv~~I~~la~ 189 (405)
T COG0520 116 VSDLEHHSNIVPWQELAKRTGAKVRVIPLD-DDGLLDLDALEKLITP-----KTKLVALSHVSNVTGTVNPVKEIAELAH 189 (405)
T ss_pred EccCcchhhHHHHHHHHHhcCcEEEEEecC-CCCCcCHHHHHHhcCC-----CceEEEEECccccccccchHHHHHHHHH
Confidence 689999955 7899999899999999998 5789999999998775 589999999998 99999988865 79
Q ss_pred hCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 279 RNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 279 ~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
++|++|+|||+|++ ||.++|++++++||++||+||| ++||+|+|+||+|+++++.
T Consensus 190 ~~ga~v~VDaaq~~-~h~~idv~~l~~Df~afsgHKw-l~gP~GiGvLy~r~~~l~~ 244 (405)
T COG0520 190 EHGALVLVDAAQAA-GHLPIDVQELGCDFLAFSGHKW-LLGPTGIGVLYVRKELLEE 244 (405)
T ss_pred HcCCEEEEECcccc-CccCCCchhcCCCEEEEccccc-ccCCCceEEEEEchHHHhh
Confidence 99999999999999 9999999999999999999999 5559999999999998876
No 2
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-38 Score=309.48 Aligned_cols=190 Identities=19% Similarity=0.149 Sum_probs=163.2
Q ss_pred ccchHHHHHHhhccCCC---ChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh--CCCC---CCCe-
Q 035915 132 TQLEPSRLLDILTKKSS---FPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES--YPFF---RGNF- 202 (344)
Q Consensus 132 v~~~~~~L~~~L~gnss---~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s--l~~~---~Gd~- 202 (344)
|.+.........+||++ ..|++++..+++||++||+++|++|+ +|+||||+||+.|+++.+ +.+. .|.+
T Consensus 17 v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~--eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HI 94 (386)
T COG1104 17 VLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPE--EIIFTSGATESNNLAIKGAALAYRNAQKGKHI 94 (386)
T ss_pred HHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCC--eEEEecCCcHHHHHHHHhhHHhhhcccCCCeE
Confidence 43433333344588843 46999999999999999999999985 799999999999999887 4332 4556
Q ss_pred EEEcCCcC--HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-H
Q 035915 203 YMTIIGEE--LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-A 277 (344)
Q Consensus 203 ivS~~eH~--~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-a 277 (344)
|+|.+||+ .+.++++ ++.|++|.++|++. +|.++.++|++++++ +|.||+++++|| |++|||++|++ +
T Consensus 95 Its~iEH~aVl~~~~~L-e~~g~~Vtyl~V~~-~G~v~~e~L~~al~~-----~T~LVSim~aNnE~G~IQpI~ei~~i~ 167 (386)
T COG1104 95 ITSAIEHPAVLNTCRYL-ERQGFEVTYLPVDS-NGLVDLEQLEEALRP-----DTILVSIMHANNETGTIQPIAEIGEIC 167 (386)
T ss_pred EEcccccHHHHHHHHHH-HhcCCeEEEeCCCC-CCeEcHHHHHHhcCC-----CceEEEEEecccCeeecccHHHHHHHH
Confidence 67899999 6788888 67899999999998 699999999999986 489999999998 99999999976 6
Q ss_pred HhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 278 HRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 278 r~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
+++|++||+||+|++ |++|||+..+++|+++||+||+ + ||+|+|+||+|+...
T Consensus 168 k~~~i~fHvDAvQa~-Gkipi~~~~~~vD~ls~SaHK~-~-GpkGiGaLyv~~~~~ 220 (386)
T COG1104 168 KERGILFHVDAVQAV-GKIPIDLEELGVDLLSFSAHKF-G-GPKGIGALYVRPGVR 220 (386)
T ss_pred HHcCCeEEEehhhhc-CceeccccccCcceEEeehhhc-c-CCCceEEEEECCCCc
Confidence 999999999999999 9999999999999999999996 5 599999999987543
No 3
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=302.75 Aligned_cols=197 Identities=19% Similarity=0.112 Sum_probs=169.2
Q ss_pred cCCCCCCcccccchHHHHHHhhccCCCC--hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCC
Q 035915 122 FGSNLPDLDRTQLEPSRLLDILTKKSSF--PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFR 199 (344)
Q Consensus 122 ~Ga~lp~~s~v~~~~~~L~~~L~gnss~--~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~ 199 (344)
.|++-|....|-..+..+....++|+++ .++++...+|+||+.||+++||++. +|+||+|||||+|+++++++|..
T Consensus 49 ~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~--dIiFts~ATEs~Nlvl~~v~~~~ 126 (428)
T KOG1549|consen 49 NQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPS--DIVFTSGATESNNLVLKGVARFF 126 (428)
T ss_pred cCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCC--cEEEeCCchHHHHHHHHHhhccc
Confidence 3444344445766777777777888543 6888888899999999999999987 59999999999999999999977
Q ss_pred CC----eE-EEcCCcC--HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc
Q 035915 200 GN----FY-MTIIGEE--LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS 270 (344)
Q Consensus 200 Gd----~i-vS~~eH~--~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P 270 (344)
++ +| ++..||+ ..+|+.+. +.|++|+++|++ .++.++.+.+++.+++ +|+||++++++| |+++|
T Consensus 127 ~~~~~k~iitl~~eH~~v~~s~~~l~-~~g~~Vt~lpv~-~~~~~d~~~~~~~i~~-----~T~lv~I~~Vnn~~gv~~P 199 (428)
T KOG1549|consen 127 GDKTKKHIITLQTEHPCVLDSCRALQ-EEGLEVTYLPVE-DSGLVDISKLREAIRS-----KTRLVSIMHVNNEIGVLQP 199 (428)
T ss_pred cccccceEEEecccCcchhHHHHHHH-hcCeEEEEeccC-ccccccHHHHHHhcCC-----CceEEEEEecccCcccccc
Confidence 76 65 4667776 55677764 468999999998 5688999999999987 589999999998 99999
Q ss_pred HHHHH-HHHhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 271 MHWIS-EAHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 271 l~~Ia-~ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
+++|. .|+..|++||+||||++ |++++|++++++||+++|+||| || |+|+|+||||+
T Consensus 200 v~EI~~icr~~~v~v~~DaAQav-G~i~vDV~eln~D~~s~s~HK~-yg-p~~iGaLYvr~ 257 (428)
T KOG1549|consen 200 VKEIVKICREEGVQVHVDAAQAV-GKIPVDVQELNADFLSISAHKI-YG-PPGIGALYVRR 257 (428)
T ss_pred HHHHHHHhCcCCcEEEeehhhhc-CCccccHHHcCchheeeecccc-cC-CCcceEEEEcc
Confidence 98887 57999999999999999 9999999999999999999999 88 88999999997
No 4
>PLN02724 Molybdenum cofactor sulfurase
Probab=100.00 E-value=1e-35 Score=319.68 Aligned_cols=231 Identities=21% Similarity=0.314 Sum_probs=183.5
Q ss_pred HHHHHHHhcCcccCccccccccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCcccccchHHHHHHhhcc
Q 035915 66 VEQYVLAKYPQYAGLVEGEKVDLSSLCINEESSETGPDDRRKSPRNGFRSEPSTPSFGSNLPDLDRTQLEPSRLLDILTK 145 (344)
Q Consensus 66 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~lp~~s~v~~~~~~L~~~L~g 145 (344)
++.++..+||-+.+.+| +|+ .|+++|..++|.++.+.+...+++
T Consensus 21 ~~~~R~~~fp~l~~~iY-------------------LD~-----------------Aatt~~~~~~V~~~~~~~~~~~~~ 64 (805)
T PLN02724 21 IDELRATEFARLKGVVY-------------------LDH-----------------AGATLYSESQLEAALADFSSNVYG 64 (805)
T ss_pred HHHHHHHHhhhcCCCEe-------------------EeC-----------------CCCCCCCHHHHHHHHHHHHhhccC
Confidence 88888788999888788 777 456655556788877777666777
Q ss_pred CCC---ChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC-HHHHHHHHHc
Q 035915 146 KSS---FPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE-LDYVREFASF 220 (344)
Q Consensus 146 nss---~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~-~~~ir~la~~ 220 (344)
|++ ..+..+...+++||++||+|||+++++|+||||+|+|+|+|+++++++|++|++|+ +..+|+ ...|++++++
T Consensus 65 np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~ 144 (805)
T PLN02724 65 NPHSQSDSSMRSSDTIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALE 144 (805)
T ss_pred CCCcCcchhhhHHHHHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHH
Confidence 743 24556677899999999999999887778999999999999999999999999865 556666 3366778888
Q ss_pred CCcEEEEEeCCC-------CCCccCH--HHHHHHhh----h-cCCCCCeeEEEEeCccc--cccccHHHHHHHHhC----
Q 035915 221 KESKVILAPEAW-------LDLRIKG--SQLSQYFR----R-KCKHTPKGLFSYPADIN--GTRYSMHWISEAHRN---- 280 (344)
Q Consensus 221 ~G~kV~~vp~~~-------~~g~i~~--~~L~~~l~----~-~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~---- 280 (344)
+|++|+++|++. ..+.++. ++|++.++ . .....+++||+++++|| |.++|+++|.++++.
T Consensus 145 ~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~ 224 (805)
T PLN02724 145 KGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSN 224 (805)
T ss_pred cCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccc
Confidence 899999998762 1233332 45655431 0 00113568999999997 999999988776542
Q ss_pred -----CcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 281 -----SWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 281 -----g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
+|+++|||||++ |+.++||+++++||++||+||| ||+|+|+|+||+|+++++
T Consensus 225 ~~~~g~~~v~vDaaQ~~-g~~piDv~~~~~Dfl~~S~HK~-~GgP~G~G~L~vr~~~~~ 281 (805)
T PLN02724 225 FSKSGRWMVLLDAAKGC-GTSPPDLSRYPADFVVVSFYKI-FGYPTGLGALLVRRDAAK 281 (805)
T ss_pred cccCcceEEEeehhhhc-CCCCCChhhcCCCEEEEeccee-ccCCCCceEEEEehhhhh
Confidence 479999999999 9999999999999999999999 999999999999998754
No 5
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.97 E-value=8.5e-30 Score=248.49 Aligned_cols=195 Identities=22% Similarity=0.208 Sum_probs=161.3
Q ss_pred cccchHHHHHHhhccCC----CChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC--CCCCCCeE-
Q 035915 131 RTQLEPSRLLDILTKKS----SFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY--PFFRGNFY- 203 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gns----s~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl--~~~~Gd~i- 203 (344)
.|.+...+.....++|+ +..+......++++|+.+++++|++++ ++|+||+|+|+|+++++.++ ++++|+++
T Consensus 14 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~-~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl 92 (371)
T PF00266_consen 14 SVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD-EEVVFTSNGTEALNAVASSLLNPLKPGDEVL 92 (371)
T ss_dssp HHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT-EEEEEESSHHHHHHHHHHHHHHHGTTTCEEE
T ss_pred HHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc-cccccccccchhhhhhhhccccccccccccc
Confidence 45555455544456653 234555667889999999999999872 48999999999999999998 57889985
Q ss_pred EEcCCcCHH--HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HH
Q 035915 204 MTIIGEELD--YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AH 278 (344)
Q Consensus 204 vS~~eH~~~--~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar 278 (344)
++..||+.+ .|..++++.|++|+++|.+. ++.++.+++++.+++ +++||++++++| |+++|+++|.+ +|
T Consensus 93 ~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~-~~~~~~~~~~~~l~~-----~~~lv~~~~~~~~tG~~~pi~~I~~~~~ 166 (371)
T PF00266_consen 93 VTSNEHPSNRYPWEEIAKRKGAEVRVIPADP-GGSLDLEDLEEALNP-----DTRLVSISHVENSTGVRNPIEEIAKLAH 166 (371)
T ss_dssp EEESSHHHHHHHHHHHHHHTTEEEEEEEEGT-TSSCSHHHHHHHHHT-----TESEEEEESBETTTTBBSSHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhccccccc-cchhhhhhhhhhhcc-----ccceEEeecccccccEEeeeceehhhhh
Confidence 588998854 47888888999999999876 478899999999975 589999999985 99999988864 79
Q ss_pred hCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 279 RNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 279 ~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
++|+++++||+|++ |..++|++++++||+++|+||+ +| |.|+|+||+|+++.+.
T Consensus 167 ~~~~~~~vD~~~~~-g~~~id~~~~~~D~~~~s~~Kl-~g-p~G~g~l~v~~~~~~~ 220 (371)
T PF00266_consen 167 EYGALLVVDAAQSA-GCVPIDLDELGADFLVFSSHKL-GG-PPGLGFLYVRPEAIER 220 (371)
T ss_dssp HTTSEEEEE-TTTT-TTSS--TTTTTESEEEEESTST-TS-SSTEEEEEEEHHHHHH
T ss_pred ccCCceeEechhcc-ccccccccccccceeeeccccc-CC-CCchhhheehhhhhhc
Confidence 99999999999999 9999999999999999999995 66 9999999999976654
No 6
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=1.2e-28 Score=243.83 Aligned_cols=193 Identities=13% Similarity=0.125 Sum_probs=157.8
Q ss_pred cccchHHHHHHhhccCC----CChhhhhhHHHHHHHHHHHHHcCC-CCCCCeEEEeCCHHHHHHHHHhhC---CCCCCCe
Q 035915 131 RTQLEPSRLLDILTKKS----SFPGSFISIPEIQARNKVLKHCGL-PDDEYLVLFTPNYRDAMMLVGESY---PFFRGNF 202 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gns----s~~g~~as~~le~AR~~IA~~Lga-~p~ey~VVFTsnaTeAlnlva~sl---~~~~Gd~ 202 (344)
.|.++..+......+|. ...+......++++|+.||+++|+ +++ +|+||+|+|+++++++.++ .+++|++
T Consensus 38 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~--~v~~t~g~t~~l~~~~~~~~~~~~~~gd~ 115 (406)
T PRK09295 38 QVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAE--ELVFVRGTTEGINLVANSWGNSNVRAGDN 115 (406)
T ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCcCE
Confidence 34444444443344442 233556777889999999999998 444 7999999999999999987 4578988
Q ss_pred E-EEcCCcCHH--HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH-H
Q 035915 203 Y-MTIIGEELD--YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS-E 276 (344)
Q Consensus 203 i-vS~~eH~~~--~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia-~ 276 (344)
+ ++..+|+.+ .|+.+++..|++++.+|.+. ++.++.++|++++++ +++||++++++| |+++|+++|. .
T Consensus 116 vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~-----~t~lv~l~~~~n~tG~~~~~~~i~~~ 189 (406)
T PRK09295 116 IIISEMEHHANIVPWQMLCARVGAELRVIPLNP-DGTLQLETLPALFDE-----RTRLLAITHVSNVLGTENPLAEMIAL 189 (406)
T ss_pred EEECcchhhHHHHHHHHHHHHcCcEEEEEecCC-CCCCCHHHHHHhcCC-----CcEEEEEecchhcccccCCHHHHHHH
Confidence 5 577888743 56777788899999999875 577899999998865 478999999886 9999998775 5
Q ss_pred HHhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 277 AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 277 ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
+|++|+++++|++|++ |+.++|+..+++||+++|+||+ +| |.|+|+||+++++.+
T Consensus 190 ~~~~~~~vivD~a~~~-g~~~~~~~~~~~D~~~~s~~K~-~g-p~G~G~l~~~~~~~~ 244 (406)
T PRK09295 190 AHQHGAKVLVDGAQAV-MHHPVDVQALDCDFYVFSGHKL-YG-PTGIGILYVKEALLQ 244 (406)
T ss_pred HHHcCCEEEEEccccc-CccccCchhcCCCEEEeehhhc-cC-CCCcEEEEEchHhHh
Confidence 7999999999999999 9999999999999999999997 87 999999999987654
No 7
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=8.8e-28 Score=234.35 Aligned_cols=193 Identities=17% Similarity=0.071 Sum_probs=154.4
Q ss_pred cccchHHHHHHhhccCCCC----hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC---CCCCCCeE
Q 035915 131 RTQLEPSRLLDILTKKSSF----PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY---PFFRGNFY 203 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gnss~----~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl---~~~~Gd~i 203 (344)
.|.++..+......+|+.. .+......++++|+.+++++|++++ +|+||+|+|+|+|+++.++ .+++|+++
T Consensus 14 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~v~~t~~~t~a~~~~l~~~~~~~~~~g~~v 91 (364)
T PLN02651 14 RVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK--EIIFTSGATESNNLAIKGVMHFYKDKKKHV 91 (364)
T ss_pred HHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEeCCHHHHHHHHHHHHHHhccCCCCEE
Confidence 3444433333334555432 2445566789999999999999876 7999999999999887654 23678885
Q ss_pred -EEcCCcCH--HHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-H
Q 035915 204 -MTIIGEEL--DYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-A 277 (344)
Q Consensus 204 -vS~~eH~~--~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-a 277 (344)
++..+|+. ..|..++ ..|++++.+|.++ ++.++.++|++++++ +++||++++++| |.++|+++|.+ +
T Consensus 92 l~~~~~h~s~~~~~~~~~-~~g~~v~~v~~~~-~~~~d~~~l~~~i~~-----~t~lv~v~~~~n~tG~~~~l~~I~~~~ 164 (364)
T PLN02651 92 ITTQTEHKCVLDSCRHLQ-QEGFEVTYLPVKS-DGLVDLDELAAAIRP-----DTALVSVMAVNNEIGVIQPVEEIGELC 164 (364)
T ss_pred EEcccccHHHHHHHHHHH-hcCCEEEEEccCC-CCcCCHHHHHHhcCC-----CcEEEEEECCCCCceecccHHHHHHHH
Confidence 46778873 4555554 5799999999875 578899999999875 478999998886 99999988865 6
Q ss_pred HhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 278 HRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 278 r~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
|++|++++||++|++ |+.++|++++++||+++|+||| +| |.|+|+||+|++..+.
T Consensus 165 ~~~g~~~~vD~a~~~-g~~~~~~~~~~~D~~~~s~hK~-~g-p~G~g~l~v~~~~~~~ 219 (364)
T PLN02651 165 REKKVLFHTDAAQAV-GKIPVDVDDLGVDLMSISGHKI-YG-PKGVGALYVRRRPRVR 219 (364)
T ss_pred HHcCCEEEEEcchhh-CCcccCcccCCCCEEEechhhh-CC-CCceEEEEEcCCCCCC
Confidence 999999999999999 9999999999999999999998 66 9999999999976654
No 8
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.96 E-value=1.4e-27 Score=235.09 Aligned_cols=193 Identities=13% Similarity=0.100 Sum_probs=158.6
Q ss_pred ccchHHHHHHhhccCCC----ChhhhhhHHHHHHHHHHHHHcCC-CCCCCeEEEeCCHHHHHHHHHhhC---CCCCCCeE
Q 035915 132 TQLEPSRLLDILTKKSS----FPGSFISIPEIQARNKVLKHCGL-PDDEYLVLFTPNYRDAMMLVGESY---PFFRGNFY 203 (344)
Q Consensus 132 v~~~~~~L~~~L~gnss----~~g~~as~~le~AR~~IA~~Lga-~p~ey~VVFTsnaTeAlnlva~sl---~~~~Gd~i 203 (344)
|.+...+......+|.. ..+......++++|+.+|+++|+ +++ +|+||+|+|+++++++.++ .+++|+++
T Consensus 35 v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~--~i~~~~~~t~~i~~~~~~~~~~~~~~gd~v 112 (401)
T PRK10874 35 VIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAK--NIVWTRGTTESINLVAQSYARPRLQPGDEI 112 (401)
T ss_pred HHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCC--EEEEECCHHHHHHHHHHHhhhccCCCcCEE
Confidence 43433333333445522 24556667789999999999999 555 7999999999999999998 47889985
Q ss_pred -EEcCCcCHH--HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-H
Q 035915 204 -MTIIGEELD--YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-A 277 (344)
Q Consensus 204 -vS~~eH~~~--~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-a 277 (344)
++..+|+.+ .|..+++..|++++.+|.+. ++.++.+++++.+++ +|+||++++.+| |.++|+++|.+ +
T Consensus 113 l~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~d~~~l~~~i~~-----~t~lv~i~~~~n~tG~~~~~~~i~~l~ 186 (401)
T PRK10874 113 IVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA-DRLPDVDLLPELITP-----RTRILALGQMSNVTGGCPDLARAITLA 186 (401)
T ss_pred EECCcchHHHHHHHHHHHHHhCCEEEEEecCC-CCcCCHHHHHHhcCc-----CcEEEEEeCCcccccCcCCHHHHHHHH
Confidence 577888743 56777788899999999875 467899999998865 478999999887 99999988865 6
Q ss_pred HhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 278 HRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 278 r~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+++|+++++|++|++ |+.++|+..+++||+++|+||+ || |.|+|+||++++..+.
T Consensus 187 ~~~g~~~ivD~a~~~-g~~~~~~~~~~~d~~~~s~~K~-~g-p~G~G~l~~~~~~~~~ 241 (401)
T PRK10874 187 HQAGMVVMVDGAQGA-VHFPADVQALDIDFYAFSGHKL-YG-PTGIGVLYGKSELLEA 241 (401)
T ss_pred HHcCCEEEEECCccc-ccccCCchhcCCCEEEEecccc-cC-CCccEEEEEchHHHhc
Confidence 999999999999999 9999999999999999999997 87 9999999999886654
No 9
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=8.5e-27 Score=229.40 Aligned_cols=194 Identities=15% Similarity=0.139 Sum_probs=157.7
Q ss_pred cccchHHHHHHhhccCCC---C-hhhhhhHHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhhC---CCCCCCe
Q 035915 131 RTQLEPSRLLDILTKKSS---F-PGSFISIPEIQARNKVLKHCGLP-DDEYLVLFTPNYRDAMMLVGESY---PFFRGNF 202 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gnss---~-~g~~as~~le~AR~~IA~~Lga~-p~ey~VVFTsnaTeAlnlva~sl---~~~~Gd~ 202 (344)
.|.++..+......+|+. + .+......++++|+.+|+++|++ ++ +|+||+|+|+|+++++.++ .+++|++
T Consensus 31 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~--~i~~t~g~t~~l~~~~~~~~~~~~~~gd~ 108 (398)
T TIGR03392 31 AVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE--NIVWTRGTTESINLVAQSYARPRLQPGDE 108 (398)
T ss_pred HHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC--eEEEeCChHHHHHHHHHHhhhccCCCCCE
Confidence 444444444443445532 2 34455667899999999999995 44 7999999999999999998 4688998
Q ss_pred E-EEcCCcCHH--HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-
Q 035915 203 Y-MTIIGEELD--YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE- 276 (344)
Q Consensus 203 i-vS~~eH~~~--~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~- 276 (344)
| ++..+|+.+ .+..+++..|++++.+|.+. ++.++.++|++++++ +|+||++++.+| |.++|++.|.+
T Consensus 109 Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~-~~~~~~~~l~~~i~~-----~t~lv~i~~~~n~tG~~~~~~~i~~~ 182 (398)
T TIGR03392 109 IIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA-DLLPDIRQLPELLTP-----RTRILALGQMSNVTGGCPDLARAITL 182 (398)
T ss_pred EEECCcchhHHHHHHHHHHHHcCcEEEEEecCC-CCCcCHHHHHHHhcc-----CceEEEEECccccccccCCHHHHHHH
Confidence 5 467788743 46667788899999999875 467889999998865 478999999887 99999988764
Q ss_pred HHhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 277 AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 277 ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+|++|+++++|++|++ |+.++|+..+++||+++|+||+ || |.|+|+||++++..+.
T Consensus 183 ~~~~~~~~ivD~a~~~-~~~~~~~~~~~~d~~~~s~~K~-~g-p~G~G~l~~~~~~~~~ 238 (398)
T TIGR03392 183 AHQYGAVVVVDGAQGV-VHGPPDVQALDIDFYAFSGHKL-YG-PTGIGVLYGKTELLEA 238 (398)
T ss_pred HHHcCCEEEEEhhhhc-CCCCCChhhcCCCEEEEecccc-cC-CCceEEEEEcHHHHhh
Confidence 6999999999999999 9999999999999999999997 87 8899999999876543
No 10
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=9.3e-27 Score=231.72 Aligned_cols=194 Identities=15% Similarity=0.094 Sum_probs=156.5
Q ss_pred ccchHHHHHHhhccC----CCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC---CCCCCCeEE
Q 035915 132 TQLEPSRLLDILTKK----SSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY---PFFRGNFYM 204 (344)
Q Consensus 132 v~~~~~~L~~~L~gn----ss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl---~~~~Gd~iv 204 (344)
|.+...+......+| ..+.+......++++|+.+|+++|+++. ++|+||+|+|+++++++.++ .+.+|+.++
T Consensus 48 v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~-~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl 126 (424)
T PLN02855 48 VLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS-REIVFTRNATEAINLVAYTWGLANLKPGDEVI 126 (424)
T ss_pred HHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC-CEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEE
Confidence 444444433334444 2234455556789999999999999632 37999999999999999876 467898854
Q ss_pred -EcCCcCH--HHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HH
Q 035915 205 -TIIGEEL--DYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AH 278 (344)
Q Consensus 205 -S~~eH~~--~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar 278 (344)
+..+|+. ..|+.++++.|++++.+|.+.. +.++.++|++.+++ +++||++++++| |.++|+++|.+ +|
T Consensus 127 ~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~-----~t~lv~i~~~~n~tG~~~~~~~I~~l~~ 200 (424)
T PLN02855 127 LSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD-EVLDVEQLKELLSE-----KTKLVATHHVSNVLGSILPVEDIVHWAH 200 (424)
T ss_pred ECCCccHHHHHHHHHHHHHcCCEEEEEecCCC-CCcCHHHHHHHhcc-----CceEEEEeCccccccccCCHHHHHHHHH
Confidence 6778873 3577778888999999998753 56899999998865 478999999887 99999987754 79
Q ss_pred hCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 279 RNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 279 ~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
++|+++++|++|++ |+.++|+.++++||+++|+||+ +| |.|+|+||++++.++.
T Consensus 201 ~~g~~vivD~a~~~-g~~~~~~~~~~~d~~~~s~~K~-~g-p~G~G~l~~~~~~~~~ 254 (424)
T PLN02855 201 AVGAKVLVDACQSV-PHMPVDVQTLGADFLVASSHKM-CG-PTGIGFLWGKSDLLES 254 (424)
T ss_pred HcCCEEEEEhhhhc-CCcCCCchhcCCCEEEeecccc-cC-CCccEEEEEchhhhhc
Confidence 99999999999999 9999999999999999999997 77 9999999999887554
No 11
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=6.6e-26 Score=221.43 Aligned_cols=189 Identities=19% Similarity=0.119 Sum_probs=150.4
Q ss_pred cccch-HHHHHHhhccCCCC---hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC--CCCCCeE-
Q 035915 131 RTQLE-PSRLLDILTKKSSF---PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP--FFRGNFY- 203 (344)
Q Consensus 131 ~v~~~-~~~L~~~L~gnss~---~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~--~~~Gd~i- 203 (344)
.|..+ .+.+. ...+|+.. .+......++++|+.+++++|++++ +|+||+|+|+|+++++.++. +.+|+.+
T Consensus 14 ~v~~a~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~i~~t~~~t~a~~~al~~~~~~~~~~~~vv 90 (379)
T TIGR03402 14 EVLEAMLPYFT-EYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD--EIIFTSGGTESDNTAIKSALAAQPEKRHII 90 (379)
T ss_pred HHHHHHHHHHH-hcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEeCcHHHHHHHHHHHHHHhcCCCCeEE
Confidence 34444 34443 34566332 2344566789999999999999865 79999999999999888652 3456775
Q ss_pred EEcCCcCHH--HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HH
Q 035915 204 MTIIGEELD--YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AH 278 (344)
Q Consensus 204 vS~~eH~~~--~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar 278 (344)
++..+|+.+ .+..+ ++.|++++.+|.++ ++.++.++|++.+++ ++++|++++.+| |.++|++.|.+ +|
T Consensus 91 ~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~-~g~~~~~~l~~~i~~-----~~~lv~i~~~~n~tG~~~~~~~I~~l~~ 163 (379)
T TIGR03402 91 TTAVEHPAVLSLCQHL-EKQGYKVTYLPVDE-EGRLDLEELRAAITD-----DTALVSVMWANNETGTIFPIEEIGEIAK 163 (379)
T ss_pred EcccccHHHHHHHHHH-HHcCCEEEEEccCC-CCcCCHHHHHHhcCC-----CcEEEEEEcccCCeeecccHHHHHHHHH
Confidence 467888732 34444 44799999999875 477899999998865 478999998886 99999988864 69
Q ss_pred hCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 279 RNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 279 ~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
++|+++++|++|++ |+.++|+.++++||+++|+||+ +| |.|+|+||+|++.
T Consensus 164 ~~g~~vivD~~~~~-g~~~~~~~~~~~D~~~~s~~K~-~g-p~G~g~l~v~~~~ 214 (379)
T TIGR03402 164 ERGALFHTDAVQAV-GKIPIDLKEMNIDMLSLSGHKL-HG-PKGVGALYIRKGT 214 (379)
T ss_pred HcCCEEEEECcccc-cccccCcccCCCCEEEEcHHHc-CC-CCceEEEEECCCC
Confidence 99999999999999 9999999999999999999996 77 9999999999764
No 12
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.94 E-value=1e-25 Score=221.54 Aligned_cols=192 Identities=16% Similarity=0.140 Sum_probs=156.1
Q ss_pred ccchHHHHHHhhccCCC----ChhhhhhHHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhhCC---CCCCCeE
Q 035915 132 TQLEPSRLLDILTKKSS----FPGSFISIPEIQARNKVLKHCGLP-DDEYLVLFTPNYRDAMMLVGESYP---FFRGNFY 203 (344)
Q Consensus 132 v~~~~~~L~~~L~gnss----~~g~~as~~le~AR~~IA~~Lga~-p~ey~VVFTsnaTeAlnlva~sl~---~~~Gd~i 203 (344)
+.+...++....++|.+ +.+......++++|+.+++++|++ ++ +|+||+|+|+++++++.++. +.+|+++
T Consensus 34 v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~~--~v~~~~g~t~~l~~~~~~~~~~~~~~g~~v 111 (403)
T TIGR01979 34 VIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASDE--EIVFTRGTTESINLVAYSWGDSNLKAGDEI 111 (403)
T ss_pred HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCCC--eEEEeCCHHHHHHHHHHHhhhhcCCCCCEE
Confidence 44444344443445532 344555667899999999999998 44 79999999999999998863 5678886
Q ss_pred -EEcCCcCHH--HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-H
Q 035915 204 -MTIIGEELD--YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-A 277 (344)
Q Consensus 204 -vS~~eH~~~--~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-a 277 (344)
++..+|+.. .++.+++..|++++.+|.+. ++.++.++|++.+++ ++++|++++++| |+++|+++|.+ +
T Consensus 112 l~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~-~~~~~~~~l~~~i~~-----~~~lv~~~~~~~~tG~~~~~~~i~~~~ 185 (403)
T TIGR01979 112 VISEMEHHANIVPWQLLAERTGATLKFIPLDD-DGTLDLDDLEKLLTE-----KTKLVAITHVSNVLGTVNPVEEIAKLA 185 (403)
T ss_pred EECcchhhHHHHHHHHHHHhcCcEEEEEecCC-CCCCCHHHHHHHhcc-----CCeEEEEEcccccccccCCHHHHHHHH
Confidence 567788743 46667777899999999874 578899999998865 478999998886 99999988865 6
Q ss_pred HhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 278 HRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 278 r~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
|++|+++++|++|++ |+.++|+..+++||+++|+||+ || |.|+|+||++++..+
T Consensus 186 ~~~~~~~ivD~a~~~-g~~~~~~~~~~~d~~~~s~~K~-~g-p~G~g~l~~~~~~~~ 239 (403)
T TIGR01979 186 HQVGAKVLVDGAQAV-PHMPVDVQALDCDFYVFSGHKM-YG-PTGIGVLYGKEELLE 239 (403)
T ss_pred HHcCCEEEEEchhhc-CccccCccccCCCEEEEecccc-cC-CCCceEEEEchHHHh
Confidence 999999999999999 9999999999999999999998 87 999999999987644
No 13
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=2e-25 Score=218.57 Aligned_cols=190 Identities=16% Similarity=0.102 Sum_probs=153.6
Q ss_pred cccchHHHHHHhhccCCCC---hhhhhhHHHHHHHHHHHHHcCC-CCCCCeEEEeCCHHHHHHHHHhhCCC----CC-CC
Q 035915 131 RTQLEPSRLLDILTKKSSF---PGSFISIPEIQARNKVLKHCGL-PDDEYLVLFTPNYRDAMMLVGESYPF----FR-GN 201 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gnss~---~g~~as~~le~AR~~IA~~Lga-~p~ey~VVFTsnaTeAlnlva~sl~~----~~-Gd 201 (344)
.|..+..+.....++|++. .+......++++|+++++++|+ +++ +|+||+|+||++++++.++.+ .+ ++
T Consensus 14 ~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~--~i~~t~g~teal~~~~~~~~~~~~~~~~~~ 91 (382)
T TIGR03403 14 KVKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKLYKGINARDLD--DIIITSCATESNNWVLKGVYFDEILKGGKN 91 (382)
T ss_pred HHHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHHHHHcCcCCCC--eEEEeCCHHHHHHHHHHHHHHhhcccCCCC
Confidence 5666666666556677432 3445566789999999999998 454 799999999999999988642 34 45
Q ss_pred e-EEEcCCcCH--HHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH
Q 035915 202 F-YMTIIGEEL--DYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE 276 (344)
Q Consensus 202 ~-ivS~~eH~~--~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ 276 (344)
+ +++..+|+. ..+. .++..|++++.+|.+. ++.++.++|++.+++ ++++|++++.+| |+++|+++|.+
T Consensus 92 ~vi~~~~e~ps~~~~~~-~~~~~G~~v~~v~~~~-~g~~d~~~l~~~i~~-----~t~lv~~~~~~n~tG~~~~~~~I~~ 164 (382)
T TIGR03403 92 HIITTEVEHPAVRATCA-FLESLGVEVTYLPINE-QGTITAEQVREAITE-----KTALVSVMWANNETGMIFPIKEIGE 164 (382)
T ss_pred EEEEcCCccHHHHHHHH-HHHHCCCEEEEEecCC-CCCCCHHHHHHhccc-----CCeEEEEEcccCCCccccCHHHHHH
Confidence 5 457788883 3444 3456799999999875 478899999988865 478999998887 99999988865
Q ss_pred -HHhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 277 -AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 277 -ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
++++|+++++|++|++ |+.++|+.++++||+++|+||| +| |.|+|+||+|++.
T Consensus 165 la~~~g~~~ivD~a~~~-g~~~~~~~~~~~D~~~~s~~K~-~g-p~G~g~l~vr~~~ 218 (382)
T TIGR03403 165 ICKERGVLFHTDAVQAI-GKIPVDVQKAGVDFLSFSAHKF-HG-PKGVGGLYIRKGV 218 (382)
T ss_pred HHHHcCCEEEEechhhc-CCCccCccccCCCEEEEcchhh-CC-CCceEEEEECCCC
Confidence 6999999999999999 9999999999999999999998 87 9999999999865
No 14
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.93 E-value=2.9e-25 Score=220.09 Aligned_cols=167 Identities=14% Similarity=0.091 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCC---CeEE-EcCCcCH--HHHHHHHHcCCcEE----E
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRG---NFYM-TIIGEEL--DYVREFASFKESKV----I 226 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~G---d~iv-S~~eH~~--~~ir~la~~~G~kV----~ 226 (344)
.+.++++++ +++|++++ +|+||+|+|+++|+++.++ ++++ +.|+ +..+|+. ..|+..+++.|+++ +
T Consensus 71 ~~~~~~~~~-~l~g~~~~--~v~~~~~~t~~l~~~~~~~-~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~ 146 (406)
T TIGR01814 71 TLDESLLKL-RLVGAKED--EVVVMNTLTINLHLLLASF-YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMV 146 (406)
T ss_pred hhhhhhccc-cccCCCCC--cEEEeCCchHHHHHHHHHh-cCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceE
Confidence 344454556 89999876 6999999999999999987 4443 2454 5678874 34565566778887 4
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCC
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALH 303 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l 303 (344)
.++.++ ++.++.+++++.++.. ..+|++|++++++| |.++|++.|.+ ||++|++++||++|++ |+.++|+.++
T Consensus 147 ~~~~~~-~g~~~~~~l~~~~~~~--~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~-G~~~id~~~~ 222 (406)
T TIGR01814 147 QIEPRE-EETLRLEDILDTIEKN--GDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAV-GNVPLDLHDW 222 (406)
T ss_pred EeccCC-CCccCHHHHHHHHHhc--CCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEccccc-CCcccccccC
Confidence 566554 4677888888887531 13689999999985 99999988865 6999999999999999 9999999999
Q ss_pred CCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 304 RPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
++||+++|+||||+|+| | |+||++++..
T Consensus 223 gvD~~~~s~hK~l~g~p-G-~~l~v~~~~~ 250 (406)
T TIGR01814 223 GVDFACWCTYKYLNAGP-G-AGAFVHEKHA 250 (406)
T ss_pred CCCEEEEcCccccCCCC-C-eEEEEehhhh
Confidence 99999999999955545 9 8788866543
No 15
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.93 E-value=5.5e-25 Score=217.88 Aligned_cols=172 Identities=20% Similarity=0.157 Sum_probs=144.2
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC---CCCCCeE-EEcCCcCH--HHHHHHHHcCCcE
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP---FFRGNFY-MTIIGEEL--DYVREFASFKESK 224 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~---~~~Gd~i-vS~~eH~~--~~ir~la~~~G~k 224 (344)
+......++++|+.+++++|++++ +|+||+|+|+++++++.++. +.+|+++ ++..+|+. ..++.+ ++.|++
T Consensus 42 ~~~~~~~~~~~r~~la~~~g~~~~--~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~-~~~g~~ 118 (402)
T TIGR02006 42 GWEAEEAVENARNQVAELIGADSR--EIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYL-EREGFE 118 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC--eEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHH-HhcCCE
Confidence 334456789999999999999876 69999999999999887753 3578885 46777773 345444 456999
Q ss_pred EEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCC
Q 035915 225 VILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLA 301 (344)
Q Consensus 225 V~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs 301 (344)
++++|.++ ++.++.++|++.+++ ++++|++++.+| |.++|++.|.+ +|++|+++++|++|++ |+.++|+.
T Consensus 119 v~~v~~~~-~~~~d~~~l~~~l~~-----~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~-g~~~~~~~ 191 (402)
T TIGR02006 119 VTYLPPKS-NGLIDLEELKAAIRD-----DTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSV-GKIPINVN 191 (402)
T ss_pred EEEEccCC-CCcCCHHHHHHhcCC-----CCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhc-CCcccCcc
Confidence 99999875 577899999998864 478999998886 99999988865 6999999999999999 99999999
Q ss_pred CCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 302 LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 302 ~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
++++||+++|+||+ +| |.|+|+||++++...
T Consensus 192 ~~~~D~~~~s~~K~-~g-p~G~G~l~~~~~~~~ 222 (402)
T TIGR02006 192 ELKVDLMSISGHKI-YG-PKGIGALYVRRKPRV 222 (402)
T ss_pred ccCCCEEEEehhhh-cC-CCceEEEEEccCCCC
Confidence 99999999999998 87 999999999987554
No 16
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=1.1e-24 Score=210.88 Aligned_cols=191 Identities=21% Similarity=0.176 Sum_probs=151.3
Q ss_pred cccchHHHHHHhhccCCCC----hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC---CCCC-Ce
Q 035915 131 RTQLEPSRLLDILTKKSSF----PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP---FFRG-NF 202 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gnss~----~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~---~~~G-d~ 202 (344)
.|.++..+......+|+.. .+......++++|+.+++++|++++ +|+||+|+|+|+++++.++. +.+| +.
T Consensus 13 ~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~--~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~ 90 (353)
T TIGR03235 13 AVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE--EVIFTSGATESNNLAILGLARAGEQKGKKH 90 (353)
T ss_pred HHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC--eEEEeCCHHHHHHHHHHHHHHhcccCCCCe
Confidence 4444444443334455332 2444556789999999999999876 69999999999999888763 2355 55
Q ss_pred E-EEcCCcCH--HHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-
Q 035915 203 Y-MTIIGEEL--DYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE- 276 (344)
Q Consensus 203 i-vS~~eH~~--~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~- 276 (344)
+ ++..+|+. ..++.+ +..|++++.+|.++ ++.++.++|++.+++ ++++|++++.+| |.++|++.|.+
T Consensus 91 vi~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~-~~~~d~~~l~~~l~~-----~~~lv~~~~~~n~tG~~~~~~~I~~l 163 (353)
T TIGR03235 91 IITSAIEHPAVLEPIRAL-ERNGFTVTYLPVDE-SGRIDVDELADAIRP-----DTLLVSIMHVNNETGSIQPIREIAEV 163 (353)
T ss_pred eeEcccccHHHHHHHHHH-HhcCCEEEEEccCC-CCcCCHHHHHHhCCC-----CCEEEEEEcccCCceeccCHHHHHHH
Confidence 5 46777873 345444 45699999999875 467899999998864 478999998876 99999988865
Q ss_pred HHhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 277 AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 277 ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
+|++|+++++|++|++ |+.++|++++++||+++|+||| +| |.|+|+||++++..
T Consensus 164 ~~~~~~~~ivD~a~~~-g~~~~~~~~~~~D~~~~s~~K~-~g-p~g~g~l~~~~~~~ 217 (353)
T TIGR03235 164 LEAHEAFFHVDAAQVV-GKITVDLSADRIDLISCSGHKI-YG-PKGIGALVIRKRGK 217 (353)
T ss_pred HHHcCCEEEEEchhhc-CCccccccccCCCEEEeehhhc-CC-CCceEEEEEccCcc
Confidence 6999999999999999 9999999999999999999999 87 99999999998754
No 17
>PRK02948 cysteine desulfurase; Provisional
Probab=99.92 E-value=5.3e-24 Score=208.17 Aligned_cols=171 Identities=14% Similarity=0.049 Sum_probs=143.6
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC---CCCCCeEE-EcCCcCH--HHHHHHHHcCCc
Q 035915 150 PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP---FFRGNFYM-TIIGEEL--DYVREFASFKES 223 (344)
Q Consensus 150 ~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~---~~~Gd~iv-S~~eH~~--~~ir~la~~~G~ 223 (344)
.+......++++|+.+|+++|++++ +|+||+|+|+++++++.++. .++|+.++ +..+|+. ..++ .++..|+
T Consensus 37 ~~~~~~~~~~~~r~~la~~~g~~~~--~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~-~~~~~g~ 113 (381)
T PRK02948 37 IGGTASSLLQVCRKTFAEMIGGEEQ--GIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQ-SLESQGY 113 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCC--eEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHH-HHHhCCC
Confidence 4556667789999999999999865 79999999999998877652 25678754 6778873 3444 3456799
Q ss_pred EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCC
Q 035915 224 KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNL 300 (344)
Q Consensus 224 kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDL 300 (344)
+++.+|.++ ++.++.++|++.+++ +++||++++.+| |.++|++.|.+ ++++|+++++|++|++ |+.++|+
T Consensus 114 ~v~~v~~~~-~~~~d~~~l~~~l~~-----~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~-g~~~~~~ 186 (381)
T PRK02948 114 TVTEIPVDK-SGLIRLVDLERAITP-----DTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTF-GKLPIDV 186 (381)
T ss_pred EEEEEeeCC-CCCCCHHHHHHhcCC-----CCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhc-cccccCc
Confidence 999999875 477899999988864 478999998886 99999988865 6899999999999999 9999999
Q ss_pred CCCCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 301 ALHRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 301 s~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
.++++|++++|+||+ || |.|+|++|++++.
T Consensus 187 ~~~~~d~~~~s~~K~-~g-p~G~G~l~~~~~~ 216 (381)
T PRK02948 187 FEMGIDSLSVSAHKI-YG-PKGVGAVYINPQV 216 (381)
T ss_pred ccCCCCEEEecHHhc-CC-CCcEEEEEEcCCC
Confidence 999999999999998 88 9999999999875
No 18
>PRK14012 cysteine desulfurase; Provisional
Probab=99.92 E-value=5.6e-24 Score=210.57 Aligned_cols=170 Identities=18% Similarity=0.139 Sum_probs=143.7
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC---CCCCCeE-EEcCCcCH--HHHHHHHHcCCcEEE
Q 035915 153 FISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP---FFRGNFY-MTIIGEEL--DYVREFASFKESKVI 226 (344)
Q Consensus 153 ~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~---~~~Gd~i-vS~~eH~~--~~ir~la~~~G~kV~ 226 (344)
.....++++|+.+|+++|++++ +|+||+|+|+|+++++.++. +.+|++| ++..+|+. ..++.+ ++.|++++
T Consensus 46 ~~~~~~~~~r~~ia~~~g~~~~--~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~-~~~g~~~~ 122 (404)
T PRK14012 46 QAEEAVDIARNQIADLIGADPR--EIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVT 122 (404)
T ss_pred HHHHHHHHHHHHHHHHcCcCcC--eEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHH-HhCCCEEE
Confidence 3445689999999999999875 69999999999999887653 5688985 46778873 345544 44699999
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCC
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALH 303 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l 303 (344)
.++.++ ++.++.++|++++++ ++++|++++.+| |.++|++.|.+ +|++|+++++|++|++ |+.++|+..+
T Consensus 123 ~v~~~~-~g~~d~~~l~~~i~~-----~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~-g~~~~~~~~~ 195 (404)
T PRK14012 123 YLDPQS-NGIIDLEKLEAAMRD-----DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSV-GKVPIDLSKL 195 (404)
T ss_pred EEccCC-CCcCCHHHHHHhcCC-----CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhc-CCcccCcccC
Confidence 999875 578899999999875 478999998886 99999988865 6999999999999999 9999999999
Q ss_pred CCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 304 RPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
++||+++|+||+ +| |.|+|+||++++...
T Consensus 196 ~~D~~~~s~~K~-~g-p~g~G~l~~~~~~~~ 224 (404)
T PRK14012 196 KVDLMSFSAHKI-YG-PKGIGALYVRRKPRV 224 (404)
T ss_pred CCCEEEEehhhc-cC-CCceEEEEEecCCCC
Confidence 999999999997 77 889999999987543
No 19
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.92 E-value=1e-23 Score=204.65 Aligned_cols=169 Identities=17% Similarity=0.152 Sum_probs=143.5
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCH--HHHHHHHHcCCcEEEEEeC
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEEL--DYVREFASFKESKVILAPE 230 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~--~~ir~la~~~G~kV~~vp~ 230 (344)
....++++|+.+++++|+++. .+|+||+|+|+++++++.++ +++|+.++ +..+|.. ..+..+++..|++++.++.
T Consensus 42 ~~~~~~~~~~~la~~~~~~~~-~~v~~~~g~t~al~~~~~~~-~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 119 (376)
T TIGR01977 42 ASREVEETRQLLAKLFNAPSS-AHVVFTNNATTALNIALKGL-LKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKC 119 (376)
T ss_pred HHHHHHHHHHHHHHHhCcCCC-CeEEEeCCHHHHHHHHHHhc-cCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEec
Confidence 345679999999999999643 27999999999999999885 67899865 5667763 3456667767999999998
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcE
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDF 307 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DF 307 (344)
+. ++.++.++|++.+++ ++++|.+++.+| |.++|+++|.+ +|++|+++++|++|++ |..++|+..+++||
T Consensus 120 ~~-~~~~d~~~l~~~~~~-----~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~-g~~~~~~~~~~~D~ 192 (376)
T TIGR01977 120 DN-EGLISPERIKRAIKT-----NTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTA-GVIPIDMTELAIDM 192 (376)
T ss_pred CC-CCCcCHHHHHHhcCC-----CCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhcc-CccCCCchhcCCCE
Confidence 75 467899999998864 478999988776 99999988865 6999999999999999 99999999999999
Q ss_pred EEEccccCCCCCCCceEEEEEeCCC
Q 035915 308 VLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 308 vv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
+++|+||| +++|.|+|+|+++++.
T Consensus 193 ~~~s~~K~-l~~p~g~g~l~~~~~~ 216 (376)
T TIGR01977 193 LAFTGHKG-LLGPQGTGGLYIREGI 216 (376)
T ss_pred EEeccccc-ccCCCCceEEEEcCCc
Confidence 99999999 7779999999999875
No 20
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.92 E-value=1.8e-24 Score=213.65 Aligned_cols=165 Identities=9% Similarity=-0.042 Sum_probs=134.3
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhhCCCCC-CCeEEEcCCcCHHHHHHHHHcCCc-EEEEEe
Q 035915 153 FISIPEIQARNKVLKHCGLPDDEYLVLFTP-NYRDAMMLVGESYPFFR-GNFYMTIIGEELDYVREFASFKES-KVILAP 229 (344)
Q Consensus 153 ~as~~le~AR~~IA~~Lga~p~ey~VVFTs-naTeAlnlva~sl~~~~-Gd~ivS~~eH~~~~ir~la~~~G~-kV~~vp 229 (344)
.....++++|+.++++||++ ++|+|+|++ |+|+++|.++.++ +++ ++.+++..+|+.++...++++.|+ +++.++
T Consensus 45 ~f~~~~~~~r~~l~~l~~~~-~~~~v~~~~gs~T~~~~~~~~~l-~~~~~~~vi~~g~f~~~~~~~~~~~~g~~~v~~~~ 122 (378)
T PRK03080 45 PVKALLKRVIEGTRELLSLP-EGYEVGIVPGSDTGAWEMALWSL-LGARRVDHLAWESFGSKWATDVVKQLKLEDPRVLE 122 (378)
T ss_pred HHHHHHHHHHHHHHHHhCCC-CCceEEEECCchHHHHHHHHHhc-CCCCcceEEEeCHHHHHHHHHHHhhcCCCCceEec
Confidence 45678899999999999995 345899985 9999999999998 553 556666556666544334566788 999988
Q ss_pred CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHhCCcEEEecccccCcCCccCCCCCCCCcE
Q 035915 230 EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHRNSWHVLLDATALVVGEDRLNLALHRPDF 307 (344)
Q Consensus 230 ~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DF 307 (344)
.++ +..++.+++ +. +++|+++|++| |.++|++.|.+ |++|++++|||+|++ |+.++|+++ +||
T Consensus 123 ~~~-g~~~d~~~i----~~------~~~V~~~h~~t~tG~~~pi~~I~~-~~~g~~~vVDa~qs~-G~~pidv~~--iD~ 187 (378)
T PRK03080 123 ADY-GSLPDLSAV----DF------DRDVVFTWNGTTTGVRVPVARWIG-ADREGLTICDATSAA-FALPLDWSK--LDV 187 (378)
T ss_pred cCC-CCCCCHhhc----CC------CCCEEEEecCCccceeccchhhcc-ccCCCeEEEeccccc-ccCCCCHHH--CcE
Confidence 775 355665542 21 45789999885 99999998877 889999999999999 999999996 799
Q ss_pred EEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 308 VLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 308 vv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+++|+||| +++|.|+|+||+++++++.
T Consensus 188 ~~~s~~K~-l~~P~G~g~l~v~~~~~~~ 214 (378)
T PRK03080 188 YTFSWQKV-LGGEGGHGMAILSPRAVER 214 (378)
T ss_pred EEEehhhh-CCCCCceEEEEECHHHHHh
Confidence 99999999 8879999999999987754
No 21
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.92 E-value=7.5e-24 Score=205.86 Aligned_cols=174 Identities=11% Similarity=0.030 Sum_probs=140.9
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCe-EEE-cCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 153 FISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNF-YMT-IIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 153 ~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~-ivS-~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
.....++++|+.+++++|+++++..|+||+|+|+|++.++.++.. +|+. ++. ...++.. +..++++.|++++.+|.
T Consensus 32 ~~~~~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~-~~~~vlv~~~~~~~~~-~~~~a~~~g~~~~~v~~ 109 (363)
T TIGR02326 32 DYNIVVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVP-KDGKLLVVINGAYGAR-IVQIAEYLGIPHHVVDT 109 (363)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCC-CCCeEEEEeCChhhHH-HHHHHHHcCCceEEEeC
Confidence 445578999999999999975433699999999999999999854 5554 443 3322222 34566778999999998
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcE
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDF 307 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DF 307 (344)
++ ++.++.++++++++.+ .+++++++++.+| |+++|++.|.+ +|++|+++++|++|++ |..++|+.++++||
T Consensus 110 ~~-~~~~d~~~l~~~l~~~---~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~-g~~~~~~~~~~~D~ 184 (363)
T TIGR02326 110 GE-VEPPDVVEVEAILAAD---PAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSF-GGIPIDIAELHIDY 184 (363)
T ss_pred CC-CCCCCHHHHHHHHhhC---CCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccc-cCcccchhhcCccE
Confidence 75 4678999999988752 2456788887765 99999988765 6999999999999999 99999999999999
Q ss_pred EEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 308 VLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
+++|+||| +++|.|+|+||++++..+
T Consensus 185 ~~~s~~K~-l~~p~G~G~l~~~~~~~~ 210 (363)
T TIGR02326 185 LISSANKC-IQGVPGFGFVIARQAELA 210 (363)
T ss_pred EEecCccc-cccCCcceEEEECHHHHH
Confidence 99999999 766999999999987654
No 22
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.91 E-value=6e-24 Score=214.67 Aligned_cols=177 Identities=12% Similarity=0.006 Sum_probs=139.0
Q ss_pred cCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEE--eCCHHHHHHHHHhhCCC-------CCC-----Ce-EEEcCCc
Q 035915 145 KKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLF--TPNYRDAMMLVGESYPF-------FRG-----NF-YMTIIGE 209 (344)
Q Consensus 145 gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVF--TsnaTeAlnlva~sl~~-------~~G-----d~-ivS~~eH 209 (344)
+|++..+..+ +.++++|+.++++||+++...+++| |+|+|||+|+.+.+... ..| .. |+|..+|
T Consensus 70 ~np~s~~~~~-~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H 148 (431)
T TIGR01788 70 IDKDEYPQTA-EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQ 148 (431)
T ss_pred CCcccCccHH-HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcch
Confidence 5544445554 7889999999999999731014666 79999999987654311 111 23 5677776
Q ss_pred CHHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhC------
Q 035915 210 ELDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRN------ 280 (344)
Q Consensus 210 ~~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~------ 280 (344)
.+ |...++..|++++++|++..++.++.++|++++++ +|.||++++.+| |+++|++.|+. ++++
T Consensus 149 ~s--v~ka~~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~-----~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~ 221 (431)
T TIGR01788 149 VC--WEKFARYFDVELREVPMDPGRYVIDPEQVVEAVDE-----NTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGW 221 (431)
T ss_pred HH--HHHHHHHcCceeEEEecCCCceeeCHHHHHHHHhh-----CCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCC
Confidence 64 55556667999999999863358999999999976 478999999886 99999988875 5887
Q ss_pred CcEEEeccccc-------CcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCC
Q 035915 281 SWHVLLDATAL-------VVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 281 g~~vlvDAaQa-------~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
|+++||||+|+ + ++.++|+...++|++++|+||| +++|+|+|+||+|++
T Consensus 222 ~~~~HvDaaq~g~~~p~~~-~~~~~~~~~~~~DSis~s~HK~-~~~P~g~G~l~~r~~ 277 (431)
T TIGR01788 222 DIPIHVDAASGGFIAPFVY-PDLEWDFRLPRVKSINVSGHKY-GLVYPGVGWVIWRDE 277 (431)
T ss_pred CceEEEecccHHHHHHHhC-CCchhhcCCCCceEEEECchhc-cCCCCCcEEEEEeCh
Confidence 89999999999 6 7888888878899999999999 545999999999985
No 23
>PRK02769 histidine decarboxylase; Provisional
Probab=99.91 E-value=1.6e-23 Score=208.29 Aligned_cols=177 Identities=12% Similarity=-0.020 Sum_probs=140.1
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh-CCCCCCCe-EEEcCCcCHHHHHHHHHcCCcEEEEE
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES-YPFFRGNF-YMTIIGEELDYVREFASFKESKVILA 228 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s-l~~~~Gd~-ivS~~eH~~~~ir~la~~~G~kV~~v 228 (344)
|..++..++++|+.+|++||+++++.-.+||+|+|||+++.... ..+.++++ +++..+|.+. ...++..|.+++.+
T Consensus 60 g~~~~~~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv--~ka~~~lg~~~~~V 137 (380)
T PRK02769 60 PLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSV--SKIARLLRIKSRVI 137 (380)
T ss_pred CCChHHHHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehH--HHHHHHcCCCCcee
Confidence 44567778999999999999986542358999999997654332 23455666 5678888842 23344457777778
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCC---cEEEecccccCcCCcc-----
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNS---WHVLLDATALVVGEDR----- 297 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g---~~vlvDAaQa~~G~~~----- 297 (344)
|.+. +++++.++|++++++. ..+|.+|++++.+| |.+.|+++|.+ ++++| +++||||||+. +..|
T Consensus 138 ~~~~-~g~id~~~L~~~i~~~--~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg-~~~p~~~~~ 213 (380)
T PRK02769 138 TSLP-NGEIDYDDLISKIKEN--KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSG-MILPFVNNP 213 (380)
T ss_pred ccCC-CCcCcHHHHHHHHHhC--CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccc-eeecccCcc
Confidence 8764 6889999999999763 23578999999886 99999988865 68887 69999999999 9995
Q ss_pred --CCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 298 --LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 298 --LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+|+.. ++|++++|+||| +|+|.|+|+||+|++.++.
T Consensus 214 ~~~d~~~-~vDsis~s~HK~-~~~P~g~G~l~~r~~~~~~ 251 (380)
T PRK02769 214 PPFSFAD-GIDSIAISGHKF-IGSPMPCGIVLAKKKYVER 251 (380)
T ss_pred ccCCccC-CCCEEEECCccc-CCCCCCcEEEEEehhhhhh
Confidence 88877 999999999999 7789999999999876553
No 24
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.91 E-value=3.9e-23 Score=202.56 Aligned_cols=170 Identities=18% Similarity=0.150 Sum_probs=143.8
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC--CCCCCCeEE-EcCCcCH--HHHHHHHHcCCcEEEEE
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY--PFFRGNFYM-TIIGEEL--DYVREFASFKESKVILA 228 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl--~~~~Gd~iv-S~~eH~~--~~ir~la~~~G~kV~~v 228 (344)
....++++|+.+++++|++++ +|+||+|+|++++++..++ .+++|++++ +..+|.. ..|...++..|++++.+
T Consensus 58 ~~~~~~~l~~~ia~~~~~~~~--~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~ 135 (397)
T TIGR01976 58 ADQVVDDAREAVADLLNADPP--EVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWA 135 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCCC--eEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEE
Confidence 445679999999999999765 6999999999999988876 467899865 5667763 34556677789999999
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRP 305 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~ 305 (344)
+.+..++.++.++|++.+++ ++++|++++.+| |.++|++.|.+ +|++|+++++|++|++ |..++|+.++++
T Consensus 136 ~~~~~~~~~~~~~l~~~i~~-----~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~-~~~~~~~~~~~~ 209 (397)
T TIGR01976 136 RVDEATGELHPDDLASLLSP-----RTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYA-PHGLIDVQATGA 209 (397)
T ss_pred eccccCCCcCHHHHHHhcCC-----CceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhc-cccCCCHHHcCC
Confidence 98754577899999998864 478999998886 99999988865 6999999999999999 999999999999
Q ss_pred cEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 306 DFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
||+++|+||| || | ++|+++++++..+
T Consensus 210 d~~~~s~~K~-~g-~-~~G~l~~~~~~~~ 235 (397)
T TIGR01976 210 DFLTCSAYKF-FG-P-HMGILWGRPELLM 235 (397)
T ss_pred CEEEEechhh-cC-C-ceEEEEEcHHHHh
Confidence 9999999999 87 7 4999999987643
No 25
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.91 E-value=3.3e-23 Score=205.91 Aligned_cols=179 Identities=10% Similarity=0.033 Sum_probs=149.1
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
+......++++|+.+++++|++++ +.++||+++|++++.++.++ +++||+++ +..+|....|..++++.|++++.++
T Consensus 37 ~~~~~~~~~~~~~~l~~~~g~~~~-~~vi~~~~gt~a~~~a~~~~-~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~ 114 (401)
T PLN02409 37 SPAFPALTKELLEDVKYIFKTKSG-TPFIFPTTGTGAWESALTNT-LSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVE 114 (401)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCC-CEEEEeCCcHHHHHHHHHhc-CCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEE
Confidence 344556789999999999999753 47999999999999888775 68999854 5667776667777888899999999
Q ss_pred CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH-H--HHhCCcEEEecccccCcCCccCCCCCCC
Q 035915 230 EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS-E--AHRNSWHVLLDATALVVGEDRLNLALHR 304 (344)
Q Consensus 230 ~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia-~--ar~~g~~vlvDAaQa~~G~~~LDLs~l~ 304 (344)
.++. ..++.++|++++++.. ..++++|++++.+| |.++|++.|. . +|++|+++++|++|++ |..++|+.+++
T Consensus 115 ~~~~-~~~~~~~l~~~l~~~~-~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~-g~~~id~~~~~ 191 (401)
T PLN02409 115 SPWG-QGADLDILKSKLRQDT-NHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSI-GALDFRMDEWG 191 (401)
T ss_pred CCCC-CCCCHHHHHHHHhhCc-CCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEccccc-CCccccccccC
Confidence 8763 4578999999987521 02578999998875 9999998775 5 6889999999999999 99999999999
Q ss_pred CcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 305 PDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+||+++|+||| |++|.|+|+||+++++.+.
T Consensus 192 ~D~~~~s~~K~-l~~P~G~G~l~~~~~~~~~ 221 (401)
T PLN02409 192 VDVALTGSQKA-LSLPTGLGIVCASPKALEA 221 (401)
T ss_pred ccEEEEcCccc-cCcCCCcceeEECHHHHHH
Confidence 99999999999 7779999999999877554
No 26
>PLN03032 serine decarboxylase; Provisional
Probab=99.89 E-value=1.5e-22 Score=201.36 Aligned_cols=177 Identities=13% Similarity=0.034 Sum_probs=139.0
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC-CCCCCe-EEEcCCcCHHHHHHHHHcCCcEEEE
Q 035915 150 PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP-FFRGNF-YMTIIGEELDYVREFASFKESKVIL 227 (344)
Q Consensus 150 ~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~-~~~Gd~-ivS~~eH~~~~ir~la~~~G~kV~~ 227 (344)
.|..+++.++++|+.+|++||++++++.-+||+|+|||+++.+.+.. ..++.. +++..+|.+ +...++..|.+++.
T Consensus 60 ~g~~a~~~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~S--v~kaa~~lg~~~~~ 137 (374)
T PLN03032 60 YGVHSRQFEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMEAVK 137 (374)
T ss_pred CCccHHHHHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeH--HHHHHHHcCCCCeE
Confidence 45677888999999999999998774334999999999987665421 123334 568888874 22334556777888
Q ss_pred EeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCC-----cEEEecccccCcCCccC-
Q 035915 228 APEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNS-----WHVLLDATALVVGEDRL- 298 (344)
Q Consensus 228 vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g-----~~vlvDAaQa~~G~~~L- 298 (344)
+|++. +|+++.++|+++++++. ..+.+|++++.+| |++.|+++|+. ++++| +++||||||+. +..++
T Consensus 138 V~~d~-~g~id~~~L~~~i~~~~--~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg-~~~p~~ 213 (374)
T PLN03032 138 VPTLP-SGEIDYDDLERALAKNR--DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFG-LMMPFV 213 (374)
T ss_pred eeeCC-CCcCcHHHHHHHHHHcC--CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchh-hhhhcc
Confidence 99876 68999999999997632 2467899988876 99999998876 57775 58999999999 98885
Q ss_pred ------CCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 299 ------NLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 299 ------DLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
|+. .++|.+++|+||| +|.|+|+|+|++|++..+
T Consensus 214 ~~~~~~~~~-~~vDSis~s~HK~-~g~P~g~G~ll~r~~~~~ 253 (374)
T PLN03032 214 SRAPEVTFR-KPIGSVSVSGHKF-LGCPMPCGVALTRKKHVK 253 (374)
T ss_pred CCCcccCCC-cCCcEEEECcccc-cCCCcCeEEEEEEchhhH
Confidence 554 4799999999998 777999999999987654
No 27
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.89 E-value=3.4e-22 Score=194.08 Aligned_cols=197 Identities=17% Similarity=0.122 Sum_probs=155.7
Q ss_pred CCcccccchHHHHHHhhccCCC----ChhhhhhHHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhhCCCC--C
Q 035915 127 PDLDRTQLEPSRLLDILTKKSS----FPGSFISIPEIQARNKVLKHCGLP-DDEYLVLFTPNYRDAMMLVGESYPFF--R 199 (344)
Q Consensus 127 p~~s~v~~~~~~L~~~L~gnss----~~g~~as~~le~AR~~IA~~Lga~-p~ey~VVFTsnaTeAlnlva~sl~~~--~ 199 (344)
|+...+++..+.+.. ...|++ ..+......++++|+.+++++|++ ++ .|+||+|+|+|+++++.++... +
T Consensus 11 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~--~v~~~~g~t~a~~~~~~~l~~~~~~ 87 (373)
T cd06453 11 KPQPVIDAIVDYYRH-YNANVHRGVHELSARATDAYEAAREKVARFINAPSPD--EIIFTRNTTEAINLVAYGLGRANKP 87 (373)
T ss_pred CCHHHHHHHHHHHHh-cCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCC--eEEEeCCHHHHHHHHHHHhhhcCCC
Confidence 334455555555543 455532 223445566799999999999997 43 7999999999999999998654 7
Q ss_pred CCeEE-EcCCcCH--HHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHH
Q 035915 200 GNFYM-TIIGEEL--DYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWI 274 (344)
Q Consensus 200 Gd~iv-S~~eH~~--~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~I 274 (344)
|+.++ +..+|.. ..+..+++..|++++.+|.++ ++.++.++|++.+.+ ++++|.+++.+| |.+.|++.|
T Consensus 88 g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~d~~~l~~~l~~-----~~~~v~~~~~~~~tG~~~~~~~i 161 (373)
T cd06453 88 GDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD-DGQLDLEALEKLLTE-----RTKLVAVTHVSNVLGTINPVKEI 161 (373)
T ss_pred CCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC-CCCcCHHHHHHHhcC-----CceEEEEeCcccccCCcCCHHHH
Confidence 88754 5666663 245566667799999999875 578999999998865 478999998876 999999877
Q ss_pred H-HHHhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 275 S-EAHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 275 a-~ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
. .|+++|+++++|++|+. |..++++..+++|++++|+||| +++ .|+|+++++++..+.
T Consensus 162 ~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~d~~~~s~~K~-~~~-~g~g~~~~~~~~~~~ 220 (373)
T cd06453 162 GEIAHEAGVPVLVDGAQSA-GHMPVDVQDLGCDFLAFSGHKM-LGP-TGIGVLYGKEELLEE 220 (373)
T ss_pred HHHHHHcCCEEEEEhhhhc-CceeeeccccCCCEEEeccccc-cCC-CCcEEEEEchHHhhc
Confidence 6 47999999999999999 9999999989999999999999 885 699999999876544
No 28
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.89 E-value=3e-23 Score=203.13 Aligned_cols=164 Identities=11% Similarity=0.124 Sum_probs=123.1
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCC-HHHHHHHHHhhC--CCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEE
Q 035915 153 FISIPEIQARNKVLKHCGLPDDEYLVLFTPN-YRDAMMLVGESY--PFFRGNFYM-TIIGEELDYVREFASFKESKVILA 228 (344)
Q Consensus 153 ~as~~le~AR~~IA~~Lga~p~ey~VVFTsn-aTeAlnlva~sl--~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~v 228 (344)
...+.++++|+.+++|||++ ++++|+||+| +|+|+|+++.++ ++.+|++++ +.++|+ +..++++.|++++++
T Consensus 41 ~~~~~~~~~r~~l~~l~~~~-~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~g~~~~~---~~~~a~~~g~~~~~~ 116 (355)
T cd00611 41 DFEAIVNEAESDLRELLNIP-DNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVTGAWSAK---AAKEAKRYGGVVVIV 116 (355)
T ss_pred HHHHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHHH---HHHHHHhcCCCcEEE
Confidence 44567899999999999984 4558999988 999999999998 334666654 455533 244667789999998
Q ss_pred eCCCCCCcc-C-HHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHhCCcEEEecccccCcCCccCCCCCCC
Q 035915 229 PEAWLDLRI-K-GSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHRNSWHVLLDATALVVGEDRLNLALHR 304 (344)
Q Consensus 229 p~~~~~g~i-~-~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~g~~vlvDAaQa~~G~~~LDLs~l~ 304 (344)
+.+.. +.+ + .+..+..+++ ++++|+++|++| |++++ ++. +.+|++++|||+|++ |+.++|+++++
T Consensus 117 ~~~~~-g~~~~~~~~~~~~~~~-----~~~lV~~~h~~t~tG~~~~--~i~--~~~g~~~~VDa~qs~-g~~~idv~~~~ 185 (355)
T cd00611 117 AAKEE-GKYTKIPDVETWDLAP-----DAAYVHYCSNETIHGVEFD--EVP--DTGGVPLVADMSSNI-LSRPIDVSKFG 185 (355)
T ss_pred ecccc-cCCCCCCCHhhcCCCC-----CCCEEEEeCCcccccEEcc--eec--ccCCCeEEEEccccc-cCCCCCHHHhC
Confidence 87532 212 2 1212222332 578999999987 98743 333 458999999999999 99999999876
Q ss_pred CcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 305 PDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+ +++|+||+ || |.|+|+||+|+++.+.
T Consensus 186 ~--~~ss~~K~-lG-P~G~g~l~~~~~~~~~ 212 (355)
T cd00611 186 V--IYAGAQKN-LG-PAGVTVVIVRKDLLGK 212 (355)
T ss_pred E--EEeecccc-cC-CCceEEEEECHHHHhh
Confidence 5 44779998 88 9999999999987754
No 29
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.88 E-value=1.7e-21 Score=188.05 Aligned_cols=173 Identities=10% Similarity=0.105 Sum_probs=142.9
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 153 FISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 153 ~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
...+..+++|+.+++++|++++ +.++||+|+|+|+++++.++ +.+|+.++. ..+|..+.+...++..|++++.+|.+
T Consensus 29 ~~~~~~~~~~~~la~~~g~~~~-~~~~~~~~~t~al~~~~~~~-~~~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 106 (356)
T cd06451 29 EFLALMDEILEGLRYVFQTENG-LTFLLSGSGTGAMEAALSNL-LEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKP 106 (356)
T ss_pred HHHHHHHHHHHHHHHHhcCCCC-CEEEEecCcHHHHHHHHHHh-CCCCCEEEEecCCchhHHHHHHHHHhCCCeEEeecC
Confidence 3445689999999999999543 36899999999999999988 468998764 34454443555667789999999987
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEE
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFV 308 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFv 308 (344)
. ++.++.++|++.+++. ++++|.+++.+| |.++|++.|.+ ++++|+++++|++|++ |..++++...++|++
T Consensus 107 ~-~~~~~~~~l~~~i~~~----~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~-g~~~~~~~~~~~d~~ 180 (356)
T cd06451 107 W-GEAVSPEEIAEALEQH----DIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSL-GGEPFRMDEWGVDVA 180 (356)
T ss_pred C-CCCCCHHHHHHHHhcc----CCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhc-cCccccccccCccEE
Confidence 5 4678999999988751 467888887765 99999988865 6899999999999999 999999988899999
Q ss_pred EEccccCCCCCCCceEEEEEeCCCcc
Q 035915 309 LCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 309 v~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
++|+||| |++|.|+|+|+++++..+
T Consensus 181 ~~s~~K~-l~~p~g~G~l~~~~~~~~ 205 (356)
T cd06451 181 YTGSQKA-LGAPPGLGPIAFSERALE 205 (356)
T ss_pred EecCchh-ccCCCCcceeEECHHHHH
Confidence 9999999 888999999999887543
No 30
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.87 E-value=4.5e-21 Score=186.44 Aligned_cols=172 Identities=10% Similarity=0.037 Sum_probs=139.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCe-EEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNF-YMTIIGEELDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~-ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
..++++|+.+++++|++++...|+||+|+|+|++.++.++.+ +|+. ++....+....+...++..|++++.+|.++ +
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~-~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~-~ 114 (368)
T PRK13479 37 ALTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVP-RDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGE-D 114 (368)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccC-CCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCC-C
Confidence 478999999999999975434688999999999999999854 5665 444433222223456677899999999875 4
Q ss_pred CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEEEc
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCN 311 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S 311 (344)
+.++.+++++.++++ .++++|.+++.+| |.++|++.|.+ +|++|+++++|++|++ |..++|+.++++|++++|
T Consensus 115 ~~~d~~~l~~~l~~~---~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~-g~~~~~~~~~~~d~~v~s 190 (368)
T PRK13479 115 EPPDAAEVEAALAAD---PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSF-GAIPIDIAELGIDALISS 190 (368)
T ss_pred CCCCHHHHHHHHHhC---CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEccccc-CCccccccccCceEEEec
Confidence 568999999988642 2467888888875 99999987765 6999999999999999 999999999999999999
Q ss_pred cccCCCCCCCceEEEEEeCCCcc
Q 035915 312 LDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 312 ~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
+||| +++|.|+|++|++++..+
T Consensus 191 ~~K~-l~g~~G~G~l~~~~~~~~ 212 (368)
T PRK13479 191 ANKC-IEGVPGFGFVIARRSELE 212 (368)
T ss_pred Cccc-cccCCCceEEEECHHHHH
Confidence 9999 655889999999987654
No 31
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.85 E-value=7e-21 Score=192.49 Aligned_cols=173 Identities=12% Similarity=-0.055 Sum_probs=131.7
Q ss_pred ChhhhhhHHHH-HHHHHHHHHcCCCCCCCeEEEe---CCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHH--HHHHHHHc-
Q 035915 149 FPGSFISIPEI-QARNKVLKHCGLPDDEYLVLFT---PNYRDAMMLVGESYPFFRGNFYM-TIIGEELD--YVREFASF- 220 (344)
Q Consensus 149 ~~g~~as~~le-~AR~~IA~~Lga~p~ey~VVFT---snaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~--~ir~la~~- 220 (344)
+.|.+....++ .+|++++++||++++ ++.|| +++|+|+++++.++ +++||+|+ +..+|+.. .+..+++.
T Consensus 72 ~~g~~~~~~iE~~ar~~~a~lf~a~~~--~~~~~~~~~sgt~an~~v~~al-~~~gd~Ii~~~~ehg~~l~~~~~l~~~~ 148 (452)
T PTZ00094 72 YGGNEVVDKIENLCQKRALEAFGLDPE--EWGVNVQPYSGSPANFAVYTAL-LQPHDRIMGLDLPSGGHLTHGFYTAKKK 148 (452)
T ss_pred cccchHHHHHHHHHHHHHHHHhCCCcc--cceeecCCCchHHHHHHHHHHh-cCCCCEEEecccccCCcccccccccccc
Confidence 46677777787 499999999999866 58888 89999999999998 78899865 67788733 22222111
Q ss_pred -----CCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-ccccccHHHHHH-HHhCCcEEEecccccCc
Q 035915 221 -----KESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-NGTRYSMHWISE-AHRNSWHVLLDATALVV 293 (344)
Q Consensus 221 -----~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-NG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~ 293 (344)
.++++...+.+. +|.++.++|++.++.. +++++.+. .+ +|.++|++.|++ +|++|++++||++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~-~g~id~~~L~~~l~~~----~~~lvi~~-~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~- 221 (452)
T PTZ00094 149 VSATSIYFESLPYQVNE-KGLIDYDKLEELAKAF----RPKLIIAG-ASAYPRDIDYKRFREICDSVGAYLMADIAHTS- 221 (452)
T ss_pred cccceeeeeeeecccCC-CCCcCHHHHHHHHHHh----CCCEEEEe-CCCCCCccCHHHHHHHHHHcCCEEEEeccchh-
Confidence 123444555665 4789999999998642 24566654 34 499999998875 6999999999999999
Q ss_pred CCccCCCCC---CCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 294 GEDRLNLAL---HRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 294 G~~~LDLs~---l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
|+.+.|+.. .++||+++|+||| |+||+| |+|+++++..
T Consensus 222 G~i~~~~~~~~~~~~D~l~~S~hK~-l~GP~G-g~l~~~~~~~ 262 (452)
T PTZ00094 222 GLVAAGVLPSPFPYADVVTTTTHKS-LRGPRS-GLIFYRKKVK 262 (452)
T ss_pred ccccCCCCCCCCCCCcEEEcCCccC-CCCCCc-eEEEEecccc
Confidence 999887643 3699999999999 766998 8888887653
No 32
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.85 E-value=2.2e-20 Score=184.54 Aligned_cols=175 Identities=15% Similarity=0.124 Sum_probs=141.3
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
+......++++|+.+|+++|++ .++||+|+|+|+++++.++ +.+|+.++ +..+|.... ..++..|++++.+|
T Consensus 58 ~~~~~~~~~~l~~~lA~~~g~~----~~~~~~g~t~a~~~al~~l-~~~gd~Vlv~~~~h~s~~--~~~~~~G~~~~~v~ 130 (387)
T PRK09331 58 DQIKKPPIADFHEDLAEFLGMD----EARVTHGAREGKFAVMHSL-CKKGDYVVLDGLAHYTSY--VAAERAGLNVREVP 130 (387)
T ss_pred ccccChHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHh-cCCCCEEEECCCchHHHH--HHHHHcCCEEEEEe
Confidence 3344556899999999999994 3789999999999999888 57899865 455555332 22456799999999
Q ss_pred C--CCCCCccCHHHHHHHhhhcC--CCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCC
Q 035915 230 E--AWLDLRIKGSQLSQYFRRKC--KHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLAL 302 (344)
Q Consensus 230 ~--~~~~g~i~~~~L~~~l~~~~--~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~ 302 (344)
. ++ ++.++.+++++.+++.. ...++++|++++.+| |.+.|++.|.+ +|++|+++++|++|++ |..++++..
T Consensus 131 ~~~~~-~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~-g~~~~~~~~ 208 (387)
T PRK09331 131 KTGYP-EYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTV-GRMPVDGKK 208 (387)
T ss_pred CccCc-CCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCccc-CCcCCCHHH
Confidence 8 44 46789999999886420 012578999988775 99999988865 6999999999999999 999999999
Q ss_pred CCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 303 HRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+++|++++|+||| +++|.|+|+++++++..+.
T Consensus 209 ~g~D~~~~s~~K~-l~~~~~~G~l~~~~~~i~~ 240 (387)
T PRK09331 209 LGADFIVGSGHKS-MAASAPSGVLATTEEYADK 240 (387)
T ss_pred cCCCEEEeeCccc-ccCCCCEEEEEECHHHHhh
Confidence 9999999999999 8778899999998876543
No 33
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.84 E-value=5.9e-20 Score=175.85 Aligned_cols=173 Identities=12% Similarity=0.038 Sum_probs=137.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCe-EEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNF-YMTIIGEELDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~-ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
..+++.|+.+++++|++++...|+||+|+|++++.++.++. .+|+. ++....+....+..+++..|.+++.++.++ +
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~-~~~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~-~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLV-PRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSE-Y 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhcc-CCCCeEEEECCCchhhHHHHHHHHcCCceEEEecCC-C
Confidence 67899999999999998653368899999999999999874 34555 443332221123455667899999999865 3
Q ss_pred CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEEEc
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCN 311 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S 311 (344)
..++.+++++.++.+ .+++++++++.+| |+++|++.|.+ ++++|+++++|++|++ |..++++..+++|++++|
T Consensus 109 ~~~d~~~l~~~l~~~---~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~-g~~~~~~~~~~~d~~~~s 184 (355)
T TIGR03301 109 EPPDLNRIEEALAAD---PDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSF-GAIPIDIEELDVDALIAS 184 (355)
T ss_pred CCCCHHHHHHHHHhC---CCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEecccc-CCcccchhhcCccEEEec
Confidence 578999999988642 2466788777665 99999987765 6899999999999999 999999999999999999
Q ss_pred cccCCCCCCCceEEEEEeCCCccc
Q 035915 312 LDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 312 ~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+||| +++|.|+|+++++++..+.
T Consensus 185 ~~K~-l~~~~G~g~~~~~~~~~~~ 207 (355)
T TIGR03301 185 ANKC-LEGVPGFGFVIARRDLLEA 207 (355)
T ss_pred CCcc-cccCCceeEEEECHHHHHH
Confidence 9999 6668899999999876543
No 34
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.83 E-value=3.4e-20 Score=182.64 Aligned_cols=165 Identities=10% Similarity=0.009 Sum_probs=123.0
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEe-CCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHc--CCcEEEE
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFT-PNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASF--KESKVIL 227 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFT-snaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~--~G~kV~~ 227 (344)
+....+.++++|+.++++||++ ++|+|+|| +|+|.|++.++.++...++. +++.-++.. .+...+.. .+.++.+
T Consensus 36 ~~~f~~~~~~~r~~l~~l~~~~-~~~~v~f~~gs~T~a~~~~~~~l~~~~~l-~i~~G~~~~-~~~~~a~~~~~~~~~~~ 112 (361)
T TIGR01366 36 QAPVKNLVGRVREGLAELFSLP-DGYEVILGNGGATAFWDAATFGLIEKKSL-HLSFGEFSS-KFAKAVKLAPWLGEPII 112 (361)
T ss_pred ChHHHHHHHHHHHHHHHHhCCC-CCceEEEECCchhHHHHHHHHhccccccc-EEecCHHHH-HHHHHHHhhhccCCceE
Confidence 3455678899999999999995 35689997 66999999999988433322 233322222 23333332 1226777
Q ss_pred EeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHhCCcEEEecccccCcCCccCCCCCCCC
Q 035915 228 APEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHRNSWHVLLDATALVVGEDRLNLALHRP 305 (344)
Q Consensus 228 vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~g~~vlvDAaQa~~G~~~LDLs~l~~ 305 (344)
++.++ +..++. .+. .++++|+++|++| |+++|+++| +|++|++++|||+|++ |+.++|+++ +
T Consensus 113 ~~~~~-~~~~~~-----~~~-----~~~~lV~~~h~et~tG~~~pi~~I--~~~~g~~~iVDavqs~-g~~~idv~~--~ 176 (361)
T TIGR01366 113 VTADP-GSAPEP-----QAD-----PGVDVIAWAHNETSTGVAVPVRRP--EGSDDALVVIDATSGA-GGLPVDIAE--T 176 (361)
T ss_pred EecCC-CCCCCC-----ccC-----CCCCEEEEcccCCccceecccccc--cccCCCeEEEEcCccc-cCCCCCHHH--C
Confidence 77665 233332 122 2589999999996 999999887 4789999999999999 999999995 8
Q ss_pred cEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 306 DFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
||+++|+||| ||.|.|++++++++++++.
T Consensus 177 D~~~~s~~K~-lg~~~Gl~~~~~s~~~~~~ 205 (361)
T TIGR01366 177 DVYYFAPQKN-FASDGGLWLAIMSPAALER 205 (361)
T ss_pred CEEEEEchhh-cCCCCceEEEEECHHHHhh
Confidence 9999999999 8988899999999977654
No 35
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.82 E-value=1e-19 Score=198.82 Aligned_cols=168 Identities=14% Similarity=0.107 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHH----HHHHHHHhhCCCCCCC----e-EEEcCCcCHHHHHHHHHcCCcEEE
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYR----DAMMLVGESYPFFRGN----F-YMTIIGEELDYVREFASFKESKVI 226 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaT----eAlnlva~sl~~~~Gd----~-ivS~~eH~~~~ir~la~~~G~kV~ 226 (344)
+.++++|+.+++++|+ + .|+||+|+| +++|+++.+|.-.+|+ + +++..+|+.|.. . +...|++|+
T Consensus 568 ~~~~~~r~~la~i~g~--~--~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a-~-a~~~G~~vv 641 (993)
T PLN02414 568 EMFEDLGDLLCEITGF--D--SFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPA-S-AAMCGMKIV 641 (993)
T ss_pred HHHHHHHHHHHHHhCC--C--eEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHH-H-HHHCCCEEE
Confidence 4679999999999999 3 699999999 9999999999433377 5 567889986532 1 123699999
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCC-ccCCCCC
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGE-DRLNLAL 302 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~-~~LDLs~ 302 (344)
++|.+. +|.+|.++|++++++++ .++++|++++.|| |...||++|.+ +|++|++|++||+|++ ++ ...+..+
T Consensus 642 ~v~~d~-~G~vDle~L~~~i~~~~--~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~-a~~~l~~p~~ 717 (993)
T PLN02414 642 VVGTDA-KGNINIEELRKAAEAHK--DNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMN-AQVGLTSPGF 717 (993)
T ss_pred EeccCC-CCCcCHHHHHHHHhccC--CCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHH-hccCcCCccc
Confidence 999975 68999999999997532 2589999999997 88899987764 7999999999999999 98 5566678
Q ss_pred CCCcEEEEccccCCCCCCCc-----eEEEEEeCCCcc
Q 035915 303 HRPDFVLCNLDNTQNAQPSK-----ITCLLIRKKSFD 334 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~G-----iG~L~Vr~~~~~ 334 (344)
+++||+++|+||| |++|.| +|+|++++.+..
T Consensus 718 ~GaD~~~~s~HK~-f~~P~G~GGPg~G~l~~~~~L~p 753 (993)
T PLN02414 718 IGADVCHLNLHKT-FCIPHGGGGPGMGPIGVKKHLAP 753 (993)
T ss_pred cCCCEEEecCCcc-CCcCcccCCCCeeeEEEchhhcc
Confidence 9999999999999 665654 999999986543
No 36
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.80 E-value=1.3e-18 Score=169.51 Aligned_cols=195 Identities=16% Similarity=0.124 Sum_probs=148.7
Q ss_pred ccchHHHHHHhh--ccCCCC-h---hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-
Q 035915 132 TQLEPSRLLDIL--TKKSSF-P---GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM- 204 (344)
Q Consensus 132 v~~~~~~L~~~L--~gnss~-~---g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv- 204 (344)
..++.+.+..+. ++++++ . +......+.+.|+++|+++|+ + +|+||+|+|+|+++++.++ +.+|+.++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~--~--~i~~~~g~t~al~~~l~~~-~~~gd~Vl~ 88 (361)
T cd06452 14 TPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGM--D--EARVTPGAREGKFAVMHSL-CEKGDWVVV 88 (361)
T ss_pred CHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcCC--c--eEEEeCCHHHHHHHHHHHh-cCCCCEEEE
Confidence 455666666665 344432 1 222234679999999999999 3 5999999999999999887 57899865
Q ss_pred EcCCcCHHHHHHHHHcCCcEEEEEeCCCC-CCccCHHHHHHHhhhcCC--CCCeeEEEEeCccc--cccccHHHHHH-HH
Q 035915 205 TIIGEELDYVREFASFKESKVILAPEAWL-DLRIKGSQLSQYFRRKCK--HTPKGLFSYPADIN--GTRYSMHWISE-AH 278 (344)
Q Consensus 205 S~~eH~~~~ir~la~~~G~kV~~vp~~~~-~g~i~~~~L~~~l~~~~~--~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar 278 (344)
+..+|... ...++..|++++.+|.++. +..++.++|++.+++..+ ..++++|.+++.+| |.+.|++.|.+ ++
T Consensus 89 ~~~~~~~~--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~ 166 (361)
T cd06452 89 DGLAHYTS--YVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCH 166 (361)
T ss_pred cCCcchHH--HHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHH
Confidence 44555543 2335667999999998753 137899999988863111 02478898887765 99999987764 68
Q ss_pred hCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 279 RNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 279 ~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
++|+++++|++|+. |..++++.++++|++++|+||+ +++|.++|+++++++..+.
T Consensus 167 ~~~~~vivD~a~~~-g~~~~~~~~~~~d~~~~s~~K~-l~~~~~~G~l~~~~~~~~~ 221 (361)
T cd06452 167 EYGVPLLLNGAYTV-GRMPVSGKELGADFIVGSGHKS-MAASAPIGVLATTEEWADI 221 (361)
T ss_pred HcCCeEEEECCccc-CCcCCCHHHcCCCEEEecCCcc-ccCCCCeEEEEECHHHHHH
Confidence 99999999999999 9988988888999999999999 7778899999998765544
No 37
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.80 E-value=2e-18 Score=167.07 Aligned_cols=165 Identities=15% Similarity=0.020 Sum_probs=127.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC---CCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY---PFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl---~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
...++++|+.+++++|++++ .++||+|+|+++..++.++ .+.++++++ +..+|.. +...++..|++++.+|.
T Consensus 58 ~~~~~~~~~~la~~~g~~~~--~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s--~~~~~~~~g~~~~~v~~ 133 (371)
T PRK13520 58 AKLEEEAVEMLGELLHLPDA--YGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFS--FDKAADMLGVELRRAPL 133 (371)
T ss_pred HHHHHHHHHHHHHHhCCCCC--CeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHH--HHHHHHHcCceEEEecC
Confidence 34568999999999998754 5899999999988776543 334567754 5556543 55666677999999998
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCcc-------CCC
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDR-------LNL 300 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~-------LDL 300 (344)
++ ++.++.++|++.++++ +.+|++.+.+| |.+.|++.|.+ ++++|++++||++|+. +..+ +|+
T Consensus 134 ~~-~~~~d~~~l~~~i~~~-----~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~-~~~~~~~~~~~~~~ 206 (371)
T PRK13520 134 DD-DYRVDVKAVEDLIDDN-----TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGG-FVIPFLDDPPNFDF 206 (371)
T ss_pred CC-CCcCCHHHHHHHHhhC-----CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchh-HHHHhhcCCCCccc
Confidence 76 4788999999999752 55555555543 99999988865 6999999999999986 6432 555
Q ss_pred CCCCCcEEEEccccCCCCCCCceEEEEEeCC
Q 035915 301 ALHRPDFVLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 301 s~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
...++|++++|+||| .++|.++|+++++++
T Consensus 207 ~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~~ 236 (371)
T PRK13520 207 SLPGVDSITIDPHKM-GLAPIPAGGILFRDE 236 (371)
T ss_pred cCCCCceEEECCccc-cCccCCceEEEEcCH
Confidence 567899999999999 555888999998654
No 38
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.78 E-value=7.1e-19 Score=172.92 Aligned_cols=158 Identities=13% Similarity=0.158 Sum_probs=121.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCC-HHHHHHHHHhhCCCCCCCeEE----EcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPN-YRDAMMLVGESYPFFRGNFYM----TIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsn-aTeAlnlva~sl~~~~Gd~iv----S~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
.+.++++|+.+.++||++ ++|+|+|++| +|+|++.++.++. .+|+.++ +.++|. |.+.|++.|+ +..+.
T Consensus 36 ~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgT~a~ea~~~nl~-~~~~~~l~i~~G~fg~r---~~~~a~~~g~-~~~~~ 109 (349)
T TIGR01364 36 EAVANEAESDLRELLNIP-DNYEVLFLQGGATGQFAAVPLNLL-AEGKVADYIVTGAWSKK---AAKEAKKYGV-VNVVA 109 (349)
T ss_pred HHHHHHHHHHHHHHhCCC-CCceEEEEcCCchHHHHHHHHhcC-CCCCeEEEEECCHHHHH---HHHHHHHhCC-cEEEe
Confidence 367899999999999974 4568999977 9999999999984 3566532 344433 4667888898 76665
Q ss_pred CC----CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHhCCcEEEecccccCcCCccCCCCCC
Q 035915 230 EA----WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHRNSWHVLLDATALVVGEDRLNLALH 303 (344)
Q Consensus 230 ~~----~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~g~~vlvDAaQa~~G~~~LDLs~l 303 (344)
.+ |. ..++.++++ ++ .++++|+++|+.| |+.+| ..++.++++++|||+|++ |+.++|++++
T Consensus 110 ~~~~~~~~-~~~~~~~~~--~~-----~~~~~v~~th~ETstGv~~~----~l~~~~~~l~iVDavss~-g~~~id~~~~ 176 (349)
T TIGR01364 110 SGKEGNYT-KIPDPSTWE--IS-----EDAAYVHYCANETIHGVEFR----ELPDVKNAPLVADMSSNI-LSRPIDVSKF 176 (349)
T ss_pred ccccCCCC-CCCCHHhcC--CC-----CCCCEEEEcCCCCcccEecc----eecccCCCeEEEEccccc-cCccCCHHHc
Confidence 43 31 234544443 22 2478999999875 99987 233557999999999999 9999999975
Q ss_pred CCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 304 RPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
||+++|+||+ || |.|+|+|++++++++.
T Consensus 177 --d~~~~ssqK~-lg-P~Glg~l~~s~~~~~~ 204 (349)
T TIGR01364 177 --GLIYAGAQKN-IG-PAGLTVVIVRKDLLGR 204 (349)
T ss_pred --cEEEEecccc-cC-CCceEEEEECHHHHhh
Confidence 6999999999 88 9999999999988765
No 39
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=5.4e-18 Score=171.49 Aligned_cols=158 Identities=12% Similarity=-0.029 Sum_probs=129.5
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEE
Q 035915 152 SFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILA 228 (344)
Q Consensus 152 ~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~v 228 (344)
+.....+++.++++|+++|+. ..+||+|+|+|+++++.++ +++||+|+ +..+|. .+.+.+.+.+.|++++++
T Consensus 60 R~~~p~~~~le~~lA~l~g~~----~av~~sSGt~Al~~al~~l-l~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~v 134 (433)
T PRK08134 60 RISNPTVAVLEERVAALEGGV----GAIATASGQAALHLAIATL-MGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFV 134 (433)
T ss_pred cCcChHHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHH-hCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEE
Confidence 344456789999999999985 2699999999999999988 88999864 677776 344455456789999998
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRP 305 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~ 305 (344)
+.+ +.++|++++++ +|++|.+.+.+| |.++|++.|.+ +|++|+++++|++|+. |....++ ++++
T Consensus 135 d~~------d~~~l~~~i~~-----~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD~t~a~-~~~~~pl-~~Ga 201 (433)
T PRK08134 135 KPG------DIDGWRAAIRP-----NTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTT-PYLLRPF-EHGA 201 (433)
T ss_pred CCC------CHHHHHHhcCC-----CCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hcCC
Confidence 864 56789988875 478999988887 99999988865 6999999999999999 8887666 6899
Q ss_pred cEEEEccccCCCCCCCc--eEEEEEe
Q 035915 306 DFVLCNLDNTQNAQPSK--ITCLLIR 329 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~G--iG~L~Vr 329 (344)
|++++|+||| +|+| | +|.+++.
T Consensus 202 D~vv~S~tK~-l~g~-g~~~gG~v~~ 225 (433)
T PRK08134 202 DLVYHSATKF-LGGH-GTAIGGVLVD 225 (433)
T ss_pred CEEEeccccc-cCCC-CCceEEEEEe
Confidence 9999999999 8845 6 7878775
No 40
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.77 E-value=3.5e-19 Score=175.63 Aligned_cols=161 Identities=12% Similarity=0.126 Sum_probs=119.4
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhhCCCCCCCeE---E-EcCCcCHHHHHHHHHcCCcEEEEE
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTP-NYRDAMMLVGESYPFFRGNFY---M-TIIGEELDYVREFASFKESKVILA 228 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTs-naTeAlnlva~sl~~~~Gd~i---v-S~~eH~~~~ir~la~~~G~kV~~v 228 (344)
..+.++++|+.++++||++ ++|+|+|++ ++|.|+..+..++ +.+|+.+ + +.++|. |.+.+++.|.. ..+
T Consensus 46 f~~~~~~~~~~l~~l~~~~-~~~~v~~~~gsgt~~~Ea~~~nl-~~~g~~~l~i~~G~fg~r---~~~~a~~~g~~-~~~ 119 (360)
T PRK05355 46 FEAVAEEAEADLRELLNIP-DNYKVLFLQGGASLQFAMVPMNL-LGGGKKADYVDTGSWSKK---AIKEAKKYGEV-NVA 119 (360)
T ss_pred HHHHHHHHHHHHHHHhCCC-CCcEEEEEcCCchHHHHHHHHhc-CCCCCeEEEEECCHHHHH---HHHHHHHhCCc-eEE
Confidence 3467899999999999983 456788885 5555676666665 3455552 2 445544 45667777865 555
Q ss_pred eCCCCCCccCHHHHHH-HhhhcCCCCCeeEEEEeCccc--cccc-cHHHHHHHHhCCcEEEecccccCcCCccCCCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQ-YFRRKCKHTPKGLFSYPADIN--GTRY-SMHWISEAHRNSWHVLLDATALVVGEDRLNLALHR 304 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~-~l~~~~~~~~t~LVa~~avSN--G~i~-Pl~~Ia~ar~~g~~vlvDAaQa~~G~~~LDLs~l~ 304 (344)
..++..+..+..++.+ .+++ ++++|+++|+.| |+++ ||+.| +|++++|||+|++ |+.++|++++
T Consensus 120 ~~~~~~g~~~~~~~~~~~l~~-----~~~~V~~th~eTstGv~~~~i~~i-----~g~l~vVDavss~-g~~~idv~~~- 187 (360)
T PRK05355 120 ASSEDDGFTYIPPLDEWQLSD-----DAAYVHYTSNETIDGTEFHELPDT-----GDVPLVADMSSDI-LSRPIDVSKF- 187 (360)
T ss_pred ecccccCCCCCCChhhccCCC-----CCCEEEEccCCCcceEecCccccc-----CCCcEEEEcCccc-cCccCCHHHc-
Confidence 5443124444444544 5543 368999999875 9998 77655 7999999999999 9999999976
Q ss_pred CcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 305 PDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
||+++|+||+ || |.|+|+||+++++++.
T Consensus 188 -d~~~~ssqK~-lg-P~Glg~l~~s~~~l~~ 215 (360)
T PRK05355 188 -GLIYAGAQKN-IG-PAGLTIVIVREDLLGR 215 (360)
T ss_pred -cEEEEecccc-cc-CCceEEEEECHHHHhh
Confidence 6999999999 88 9999999999988765
No 41
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.77 E-value=2.6e-17 Score=139.74 Aligned_cols=160 Identities=14% Similarity=0.062 Sum_probs=121.1
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeE-EEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFY-MTIIGEELDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~i-vS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
++++|+.+++++|++.+ .++|++|+|+|+.+++.++. .+++.+ +....|+...+ ..+...|+++..++.+.. +.
T Consensus 2 ~~~~~~~l~~~~~~~~~--~~~~~~~~t~a~~~~~~~~~-~~~~~v~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~-~~ 76 (170)
T cd01494 2 LEELEEKLARLLQPGND--KAVFVPSGTGANEAALLALL-GPGDEVIVDANGHGSRYW-VAAELAGAKPVPVPVDDA-GY 76 (170)
T ss_pred HHHHHHHHHHHcCCCCC--cEEEeCCcHHHHHHHHHHhC-CCCCEEEEeecccceehh-hHHHhcCCEEEEeccCCC-Cc
Confidence 47899999999985444 69999999999999999984 457774 45556653222 345667999999887643 22
Q ss_pred cCH--HHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccC---CCCCCCCcEE
Q 035915 237 IKG--SQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRL---NLALHRPDFV 308 (344)
Q Consensus 237 i~~--~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~L---DLs~l~~DFv 308 (344)
... +++++... ..+++++.+++.+| |..+|++.|.+ ++++|+++++|++|.. +.... +....++|++
T Consensus 77 ~~~~~~~~~~~~~----~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~-~~~~~~~~~~~~~~~d~~ 151 (170)
T cd01494 77 GGLDVAILEELKA----KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAG-GASPAPGVLIPEGGADVV 151 (170)
T ss_pred cchhhhhhhhccc----cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccc-ccccccccccccccCCEE
Confidence 222 23333222 23578888887775 99999977765 6899999999999999 87776 6777889999
Q ss_pred EEccccCCCCCCCceEEEEEe
Q 035915 309 LCNLDNTQNAQPSKITCLLIR 329 (344)
Q Consensus 309 v~S~HK~l~G~P~GiG~L~Vr 329 (344)
++|+||| ||+ .|+|+|++|
T Consensus 152 ~~s~~K~-~~~-~~~G~l~~~ 170 (170)
T cd01494 152 TFSLHKN-LGG-EGGGVVIVK 170 (170)
T ss_pred EEEcccc-cCC-CceEEEEeC
Confidence 9999999 886 599999986
No 42
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.76 E-value=4.5e-18 Score=163.10 Aligned_cols=172 Identities=17% Similarity=0.076 Sum_probs=127.2
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC--CC---------CC--CeEE-EcCCcCHHHHHHHH
Q 035915 153 FISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP--FF---------RG--NFYM-TIIGEELDYVREFA 218 (344)
Q Consensus 153 ~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~--~~---------~G--d~iv-S~~eH~~~~ir~la 218 (344)
...+..+++++.+++++|++..+.+++||+|+|+|+++++.++. +. ++ ..++ +..+|.. +...+
T Consensus 35 ~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~--~~~~~ 112 (345)
T cd06450 35 AATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVS--VEKAA 112 (345)
T ss_pred hhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhH--HHHHH
Confidence 44556788999999999996223379999999999998877652 11 22 2444 5556653 22333
Q ss_pred HcCCcEEEEEeCCCCCCccCHHHHHHHhhhcC-CCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcC
Q 035915 219 SFKESKVILAPEAWLDLRIKGSQLSQYFRRKC-KHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVG 294 (344)
Q Consensus 219 ~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~-~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G 294 (344)
+..|.+++.+|.+. ++.++.++|++.+++.. ...+++++.+++.+| |.+.|++.|.+ ++++|+++|+|++|+. +
T Consensus 113 ~~~g~~~~~v~~~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~-~ 190 (345)
T cd06450 113 AYLDVKVRLVPVDE-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGG-F 190 (345)
T ss_pred HHHhcCeEEeeeCC-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhH-H
Confidence 44588999999875 46889999999986510 111367777777665 99999988865 6999999999999999 8
Q ss_pred CccCCCCC------CCCcEEEEccccCCCCCCCceEEEEEe
Q 035915 295 EDRLNLAL------HRPDFVLCNLDNTQNAQPSKITCLLIR 329 (344)
Q Consensus 295 ~~~LDLs~------l~~DFvv~S~HK~l~G~P~GiG~L~Vr 329 (344)
..+++... .++|++++|+||| +++|.|+|+++++
T Consensus 191 ~~~~~~~~~~~~~~~~~d~~~~s~~K~-l~~p~g~g~~~~~ 230 (345)
T cd06450 191 LLPFPEPRHLDFGIERVDSISVDPHKY-GLVPLGCSAVLVR 230 (345)
T ss_pred HhhChhhHHHhcCccccCEEEEchhHh-hCCCcchHHHHHH
Confidence 87665332 3799999999999 7779999998776
No 43
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.75 E-value=6.4e-17 Score=156.92 Aligned_cols=165 Identities=13% Similarity=0.042 Sum_probs=123.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC---C--CCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEE
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP---F--FRGNFYM-TIIGEELDYVREFASFKESKVILA 228 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~---~--~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~v 228 (344)
....+++|+.+|+++|++++ .+++++|+|+++.+++.++. + .+|+.++ +..+|. .+...++..|++++.+
T Consensus 58 ~~~~~~~~~~la~~~g~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~--~~~~~~~~~G~~~~~v 133 (373)
T TIGR03812 58 KKIEEEVVGSLGNLLHLPDA--YGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHF--SFEKAAEMLGLELRYA 133 (373)
T ss_pred HHHHHHHHHHHHHHhCCCCC--CeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchH--HHHHHHHHcCCeEEEE
Confidence 34568999999999999755 58889999999877655431 1 3567765 444543 3556677789999999
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-ccccccHHHHHH-HHhCCcEEEecccccCcCC----------c
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-NGTRYSMHWISE-AHRNSWHVLLDATALVVGE----------D 296 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-NG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~----------~ 296 (344)
|.++ ++.++.++|++.+.++ ...++.+...+ +|.+.|++.|.+ +|++|++++||++|+. +. .
T Consensus 134 ~~~~-~~~~d~~~l~~~l~~~----~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~-~~~~~~~~~~~~~ 207 (373)
T TIGR03812 134 PLDE-DYTVDVKDVEDLIDDN----TIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGG-FVIPFLKKGYNPP 207 (373)
T ss_pred eeCC-CCCcCHHHHHHHHhhC----cEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchh-HHHHHHhcCCCCC
Confidence 9875 5778999999988753 12455554333 399999988865 6899999999999985 43 2
Q ss_pred cCCCCCCCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 297 RLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 297 ~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
++|+...++|++++|+||| ..+|.++|++++++
T Consensus 208 ~~d~~~~~~d~~~~s~~K~-~~~~~~~G~~~~~~ 240 (373)
T TIGR03812 208 PFDFSLPGVQSITIDPHKM-GLSPIPAGGILFRS 240 (373)
T ss_pred CccccCCCCCEEEECcccc-CCCcCCceEEEEeC
Confidence 5677666899999999998 55588888777643
No 44
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.73 E-value=3.4e-16 Score=153.76 Aligned_cols=171 Identities=12% Similarity=0.075 Sum_probs=134.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCC-C
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAW-L 233 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~-~ 233 (344)
..+.+.|+.+|+++|+++ ++|++|++++++.++.++ +.+|+.+++ ..+|... + ..++..|++++.+|.+. .
T Consensus 51 ~~~~~~~e~lA~~~g~~~----~~i~~g~~~a~~~~~~~l-~~~gd~Vl~~~~~h~s~-~-~~~~~~g~~~~~~~~~~~~ 123 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDE----ARVTHGAREGKFAVMHAL-CKEGDWVVLDGLAHYTS-Y-VAAERAGLNVKEVPHTGHP 123 (370)
T ss_pred hHHHHHHHHHHHHhCCCc----eEEECChHHHHHHHHHHh-hCCCCEEEECCcccHHH-H-HHHHHcCCEEEEEecCCcc
Confidence 357888999999999962 567899999999999988 478898765 4555543 2 33566799999998752 2
Q ss_pred CCccCHHHHHHHhhhcCC--CCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEE
Q 035915 234 DLRIKGSQLSQYFRRKCK--HTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFV 308 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~--~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFv 308 (344)
++.++.++|++.+++... ..++++|.+++.+| |.+.|++.|.+ ++++|+++++|++|+. |..++++..+++|++
T Consensus 124 ~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~-g~~~~~~~~~~~di~ 202 (370)
T TIGR02539 124 EYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTV-GRMPVSAKEIGADFI 202 (370)
T ss_pred cCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECcccc-CCcCCCHHHcCCCEE
Confidence 356899999998863110 01467888887775 99999987765 6899999999999999 988888877789999
Q ss_pred EEccccCCCCCCCceEEEEEeCCCccc
Q 035915 309 LCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 309 v~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+.|+||| ||.+.++|+++++++..+.
T Consensus 203 v~s~sK~-~~~~g~~G~l~~~~~~i~~ 228 (370)
T TIGR02539 203 VGSGHKS-MAASGPCGVLGMSEEWEDI 228 (370)
T ss_pred EeeCccc-ccCCCCEEEEEECHHHHhh
Confidence 9999999 8866668999998876654
No 45
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.73 E-value=1.4e-16 Score=164.72 Aligned_cols=187 Identities=15% Similarity=0.021 Sum_probs=130.1
Q ss_pred HHHhhccC-CC-ChhhhhhHHHHHHHHHHHHHcCCC-----------CCCCeEEEeCCHHHHHHH---HHhhCCCC----
Q 035915 139 LLDILTKK-SS-FPGSFISIPEIQARNKVLKHCGLP-----------DDEYLVLFTPNYRDAMML---VGESYPFF---- 198 (344)
Q Consensus 139 L~~~L~gn-ss-~~g~~as~~le~AR~~IA~~Lga~-----------p~ey~VVFTsnaTeAlnl---va~sl~~~---- 198 (344)
+...+..| -. ..+..++....++-+.++++++.. ++...-+||+|+|+|+-+ +++...+.
T Consensus 110 l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~ 189 (522)
T TIGR03799 110 LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGD 189 (522)
T ss_pred HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhcccccc
Confidence 55555555 22 233445556678888888888632 222346999999999665 23322110
Q ss_pred ------------------CCCe-EEEcCCcCHHHHHHHHHcCCc---EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCee
Q 035915 199 ------------------RGNF-YMTIIGEELDYVREFASFKES---KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKG 256 (344)
Q Consensus 199 ------------------~Gd~-ivS~~eH~~~~ir~la~~~G~---kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~ 256 (344)
++.. ++|..+|.+ +...++..|. +++.+|.+. +++++.++|++.+.... ...++
T Consensus 190 ~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S--~~kaa~~lglg~~~v~~vp~d~-~g~~d~~~L~~~i~~~~-~~g~~ 265 (522)
T TIGR03799 190 FKGVAREGLFAALKHYGYDGLAILVSERGHYS--LGKAADVLGIGRDNLIAIKTDA-NNRIDVDALRDKCAELA-EQNIK 265 (522)
T ss_pred ccccccccchhhhhhccCCceEEEECCCchHH--HHHHHHHcCCCcccEEEEEeCC-CCcCCHHHHHHHHHHHH-HCCCC
Confidence 1123 456777774 3344555566 788999986 58999999999886311 12345
Q ss_pred EEEEeCcc--c--cccccHHHHHH-HHhCCcEEEecccccCcCCccCC-----CCCC-CCcEEEEccccCCCCCCCceEE
Q 035915 257 LFSYPADI--N--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLN-----LALH-RPDFVLCNLDNTQNAQPSKITC 325 (344)
Q Consensus 257 LVa~~avS--N--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LD-----Ls~l-~~DFvv~S~HK~l~G~P~GiG~ 325 (344)
+|++.++. | |.+.||+.|+. |+++|+++||||||+. +....+ +..+ ++|++++|+||| +++|.|+|+
T Consensus 266 ~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg-~~~~~~~~r~~l~gle~aDSit~d~HK~-l~~P~g~G~ 343 (522)
T TIGR03799 266 PLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGG-ATLLSNTYRHLLKGIERADSVTIDAHKQ-LYVPMGAGM 343 (522)
T ss_pred cEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhh-HHHhCHHHHHHhcCchhCCEEEEChhhc-CCcCcccEE
Confidence 66665443 2 99999988875 6999999999999998 877666 5654 899999999999 666999999
Q ss_pred EEEeCC
Q 035915 326 LLIRKK 331 (344)
Q Consensus 326 L~Vr~~ 331 (344)
||+|+.
T Consensus 344 llvr~~ 349 (522)
T TIGR03799 344 VLFKDP 349 (522)
T ss_pred EEEeCH
Confidence 999874
No 46
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.72 E-value=1.3e-16 Score=157.19 Aligned_cols=186 Identities=15% Similarity=0.097 Sum_probs=131.1
Q ss_pred cCCCCCCcccccchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCC
Q 035915 122 FGSNLPDLDRTQLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGN 201 (344)
Q Consensus 122 ~Ga~lp~~s~v~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd 201 (344)
.|.++++.+.+++..+.+. . +. .....++++++.+++++|++ .++||+|+|+|+++++.++ +.+||
T Consensus 20 ~g~s~~~~~v~~a~~~~~~-~------~~--~~~~~~~~~~~~~a~~~g~~----~~~~~~g~t~al~~al~al-~~~Gd 85 (363)
T TIGR01437 20 LGVSTVSDEVADAQKRGAQ-N------YF--EIKELVNKTGEYIANLLGVE----DAVIVSSASAGIAQSVAAV-ITRGN 85 (363)
T ss_pred CCCCCCCHHHHHHHHHHHh-c------CC--CHHHHHHHHHHHHHHhhCCC----eEEEEcCHHHHHHHHHHHH-hcCCC
Confidence 6777555444444444332 2 11 13356799999999999984 4899999999999999887 56676
Q ss_pred ---------------eEEEcCCcCHH---HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEE-EeC
Q 035915 202 ---------------FYMTIIGEELD---YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFS-YPA 262 (344)
Q Consensus 202 ---------------~ivS~~eH~~~---~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa-~~a 262 (344)
+++....|..+ .+.......|+++++++.+ ..++.++++++++++ |+++. ++.
T Consensus 86 ~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~---~~~d~~~le~ai~~~-----t~ai~~v~~ 157 (363)
T TIGR01437 86 RYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA---NECSAEQLEAAITEK-----TAAILYIKS 157 (363)
T ss_pred cchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC---CCCCHHHHHHhcChh-----ceEEEEEec
Confidence 66555444422 2334445579999888864 358999999999863 55444 332
Q ss_pred cc--ccccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 263 DI--NGTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 263 vS--NG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
.+ +|.++|++.|.+ ||++|+++++|++|.. ... .+..+++|++++|+||+ +++|+ .|+|+.+++..+
T Consensus 158 ~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~-~~~--~~~~~g~D~~~~S~~K~-l~gp~-~G~l~~~~~~i~ 227 (363)
T TIGR01437 158 HHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEE-DLQ--KYYRLGADLVIYSGAKA-IEGPT-SGLVLGKKKYIE 227 (363)
T ss_pred CCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCC-chH--HHHHcCCCEEEEeCCcc-cCCCc-eEEEEEcHHHHH
Confidence 22 399999988865 6999999999999985 211 12245799999999999 67798 899888765544
No 47
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.70 E-value=3.7e-16 Score=153.11 Aligned_cols=171 Identities=13% Similarity=0.018 Sum_probs=129.1
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCC--CCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEE
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFF--RGNFYM-TIIGEE--LDYVREFASFKESKVILA 228 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~--~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~v 228 (344)
.....++.++.+++++|++++ +++|+.|+|++.+.++.+..+. +|++|+ +...|+ ...+..+.++.|++++.+
T Consensus 62 ~~~~~~~~~~~la~~~g~~~~--~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v 139 (398)
T cd00613 62 RLQALFELQTMLCELTGMDVA--NASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEV 139 (398)
T ss_pred HHHHHHHHHHHHHHHHCCCcc--ceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEe
Confidence 335679999999999999765 5888887776655544433333 488865 555666 334555445567899999
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-cccccH-HHHHH-HHhCCcEEEecccccCcCCccCCCCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTRYSM-HWISE-AHRNSWHVLLDATALVVGEDRLNLALHRP 305 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i~Pl-~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~ 305 (344)
|.+. ++.++.++|++.+++ ++++|.+.+.++ |.+.|+ +.|.+ |+++|+++++|++|+. |..+.+...+++
T Consensus 140 ~~~~-~~~~d~~~l~~~i~~-----~t~~viv~~~~~~G~~~~~l~~i~~la~~~g~~livD~~~~~-~~~~~~~~~~~~ 212 (398)
T cd00613 140 PSDE-GGTVDLEALKEEVSE-----EVAALMVQYPNTLGVFEDLIKEIADIAHSAGALVYVDGDNLN-LTGLKPPGEYGA 212 (398)
T ss_pred ccCC-CCCcCHHHHHHhcCC-----CeEEEEEECCCCCceecchHHHHHHHHHhcCCEEEEEecccc-ccCCCChHHcCC
Confidence 8864 457889999988865 478888877654 999996 88865 6999999999999998 877777778899
Q ss_pred cEEEEccccCCCCCC-----CceEEEEEeCCCccc
Q 035915 306 DFVLCNLDNTQNAQP-----SKITCLLIRKKSFDT 335 (344)
Q Consensus 306 DFvv~S~HK~l~G~P-----~GiG~L~Vr~~~~~~ 335 (344)
|++++|+||| + .| .|+|+|++++++.+.
T Consensus 213 d~~~~s~~K~-~-~p~g~Ggp~~g~l~~~~~~~~~ 245 (398)
T cd00613 213 DIVVGNLQKT-G-VPHGGGGPGAGFFAVKKELVRF 245 (398)
T ss_pred CEEEeecccc-C-CCCCCCCCceeEEEEhhhhHhh
Confidence 9999999999 6 34 368999998876553
No 48
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.69 E-value=1.3e-15 Score=151.91 Aligned_cols=196 Identities=13% Similarity=0.159 Sum_probs=156.0
Q ss_pred ccchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC
Q 035915 132 TQLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE 210 (344)
Q Consensus 132 v~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~ 210 (344)
+....+-++.+..-............+.++++.+..+|+++. .+-+++++++|.|+.....++ ..+||+++ ...+-=
T Consensus 14 ~~v~~~V~~am~~~~~~h~s~~F~~~~~~~~~~L~~v~~t~~-~~~~ll~gsGt~amEAav~sl-~~pgdkVLv~~nG~F 91 (383)
T COG0075 14 VPVPPRVLLAMARPMVGHRSPDFVGIMKEVLEKLRKVFGTEN-GDVVLLSGSGTLAMEAAVASL-VEPGDKVLVVVNGKF 91 (383)
T ss_pred CCCCHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCC-CcEEEEcCCcHHHHHHHHHhc-cCCCCeEEEEeCChH
Confidence 444444455543333333334555678999999999999873 336777899999999988887 46899854 333311
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc--ccccccHHHHHH-HHhCCcEEEec
Q 035915 211 LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI--NGTRYSMHWISE-AHRNSWHVLLD 287 (344)
Q Consensus 211 ~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS--NG~i~Pl~~Ia~-ar~~g~~vlvD 287 (344)
..-|.+.+++.|.+|+.+...| +..++++++++.++.+ ++.++|++.|+- +|+++|++.|++ ++++|++++||
T Consensus 92 G~R~~~ia~~~g~~v~~~~~~w-g~~v~p~~v~~~L~~~---~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVD 167 (383)
T COG0075 92 GERFAEIAERYGAEVVVLEVEW-GEAVDPEEVEEALDKD---PDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVD 167 (383)
T ss_pred HHHHHHHHHHhCCceEEEeCCC-CCCCCHHHHHHHHhcC---CCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEE
Confidence 3457788888999999998888 4678999999999842 357799999875 499999999976 59999999999
Q ss_pred ccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 288 ATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 288 AaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
|+.++ |-.++++.+|++|+++.+.+|. +++|.|+|++.++++..+.
T Consensus 168 aVsS~-Gg~~~~vd~wgiDv~itgSQK~-l~~PPGla~v~~S~~a~e~ 213 (383)
T COG0075 168 AVSSL-GGEPLKVDEWGIDVAITGSQKA-LGAPPGLAFVAVSERALEA 213 (383)
T ss_pred ecccC-CCcccchhhcCccEEEecCchh-ccCCCccceeEECHHHHHH
Confidence 99999 9999999999999999999999 8889999999999988766
No 49
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.65 E-value=2.7e-15 Score=152.91 Aligned_cols=163 Identities=12% Similarity=0.072 Sum_probs=121.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC----HHHHHHHHHcCCcEEEEEe
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE----LDYVREFASFKESKVILAP 229 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~----~~~ir~la~~~G~kV~~vp 229 (344)
...++.+++.+++++|+.. .+ +++|++.|+++++.. +.+|++++ +..+|. ...+.+..+..|++++.++
T Consensus 121 g~r~~~le~~lA~l~gae~---al-vv~sg~aAi~l~l~~--l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~ 194 (454)
T TIGR00474 121 GSRYSHVEGLLCELTGAED---AL-VVNNNAAAVLLALNT--LAKGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVG 194 (454)
T ss_pred chHHHHHHHHHHHHhCCCc---EE-EECCHHHHHHHHHHH--hCCcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeC
Confidence 3467999999999999953 34 566777899988865 46899865 554542 2233344566799999887
Q ss_pred CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc----c--ccccHHHHH-HHHhCCcEEEecccc---------cCc
Q 035915 230 EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN----G--TRYSMHWIS-EAHRNSWHVLLDATA---------LVV 293 (344)
Q Consensus 230 ~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN----G--~i~Pl~~Ia-~ar~~g~~vlvDAaQ---------a~~ 293 (344)
.+. ..+.+++++++++ +|+++.+.+.+| | .+.|++.|. .+|++|+++++|++. .+
T Consensus 195 ~~~---~~~l~dle~aI~~-----~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl- 265 (454)
T TIGR00474 195 TTN---RTHLKDYEDAITE-----NTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGL- 265 (454)
T ss_pred CCC---CCCHHHHHHhcCc-----CCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccC-
Confidence 642 3467889888875 478888888886 5 589998775 479999999999872 23
Q ss_pred CCccC--CCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 294 GEDRL--NLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 294 G~~~L--DLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
++.|. +..++++|+++||+||| +||| ..|+++++++..+
T Consensus 266 ~~~p~~~~~~~~GaDiv~fSg~K~-LgGp-~~G~i~g~~~~i~ 306 (454)
T TIGR00474 266 PDEPTVQEVIAAGVDLVTFSGDKL-LGGP-QAGIIVGKKELIE 306 (454)
T ss_pred CCCcccccHhHcCCCEEEecCccc-cCCC-eEEEEEECHHHHH
Confidence 33333 44568999999999999 8889 5899999987654
No 50
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.65 E-value=2e-15 Score=151.51 Aligned_cols=169 Identities=10% Similarity=-0.016 Sum_probs=132.3
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeE-EEcCCcC--HHHHHHHHHcCCcEEEEEeC
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFY-MTIIGEE--LDYVREFASFKESKVILAPE 230 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~i-vS~~eH~--~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.+.+.++.+++++|++++ +++||+|+|+++..+..++.+.+|+++ ++..+|+ ...++.++...|++++.+|.
T Consensus 110 ~~~~~~e~~~~la~l~g~~~~--~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~ 187 (447)
T PRK00451 110 TLQAIFEYQTMICELTGMDVA--NASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY 187 (447)
T ss_pred HHHHHHHHHHHHHHHhCCCcc--eEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC
Confidence 444567788899999999865 699999999999888877765678885 4666776 33556667777999999998
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-cccccHHHHHH-HHhCCcEEEe--cccccCcCCccCCCCCCCCc
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTRYSMHWISE-AHRNSWHVLL--DATALVVGEDRLNLALHRPD 306 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i~Pl~~Ia~-ar~~g~~vlv--DAaQa~~G~~~LDLs~l~~D 306 (344)
++ + .++.++|++++++ ++++|.+++.++ |.+.|++.|.+ +|++|+++++ |+. ++ |.... ..++++|
T Consensus 188 ~~-~-~~d~~~l~~~i~~-----~t~~v~l~~pn~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~-g~~~~-~~~~~~D 257 (447)
T PRK00451 188 ED-G-VTDLEALEAAVDD-----DTAAVVVQYPNFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SL-GLLKP-PGEYGAD 257 (447)
T ss_pred CC-C-CCCHHHHHHhcCC-----CeEEEEEECCCCCCeeCCHHHHHHHHHHCCCEEEEEcChH-Hh-ccCCC-cccCCCC
Confidence 76 4 7899999998865 478888877653 99999988865 6999999988 755 45 65442 3568999
Q ss_pred EEEEccccC----CCCCCCceEEEEEeCCCccc
Q 035915 307 FVLCNLDNT----QNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 307 Fvv~S~HK~----l~G~P~GiG~L~Vr~~~~~~ 335 (344)
++++|+||| .+||| |+|++++++++.+.
T Consensus 258 ~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~~~~ 289 (447)
T PRK00451 258 IVVGEGQPLGIPLSFGGP-YLGFFATRKKLVRQ 289 (447)
T ss_pred EEEECCCcCCCCCCCCCC-CchHHHhhHHHHhh
Confidence 999999995 36668 89999998876554
No 51
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.65 E-value=1.4e-15 Score=150.87 Aligned_cols=170 Identities=14% Similarity=-0.036 Sum_probs=122.3
Q ss_pred hhhhhHHHHH-HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHH--HHHH-HHHcCCcEE
Q 035915 151 GSFISIPEIQ-ARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELD--YVRE-FASFKESKV 225 (344)
Q Consensus 151 g~~as~~le~-AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~--~ir~-la~~~G~kV 225 (344)
|......+++ +|+.+++++|++.. .|+|++ +|+|+++++.++ +++||+|+ +..+|... .+.. .....|+++
T Consensus 65 ~~~~~~~~e~~~~~~la~~~g~~~~--~i~~~s-gt~al~~~l~~l-~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~ 140 (416)
T PRK00011 65 GCEYVDVVEQLAIDRAKELFGAEYA--NVQPHS-GSQANAAVYFAL-LKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNV 140 (416)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCce--eeecCC-chHHHHHHHHHh-cCCCCEEEEeccccCCccccccccccccceeeE
Confidence 4444556665 89999999999754 476665 578999999888 78999864 56666521 1111 123346788
Q ss_pred EEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccccCcCCc-----cCC
Q 035915 226 ILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATALVVGED-----RLN 299 (344)
Q Consensus 226 ~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~-----~LD 299 (344)
+.++.+..++.++.++|++.+++. +++++.+...++|...|++.|.+ ++++|+++++|++|++ |.. +.+
T Consensus 141 ~~~~~~~~~~~~d~~~l~~~i~~~----~~k~v~~~~~~~~~~~~~~~I~~la~~~~~~livD~a~~~-g~~~~g~~~~~ 215 (416)
T PRK00011 141 VSYGVDEETGLIDYDEVEKLALEH----KPKLIIAGASAYSRPIDFKRFREIADEVGAYLMVDMAHIA-GLVAAGVHPSP 215 (416)
T ss_pred eecCcCcccCCcCHHHHHHHHHhc----CCCEEEECCCcCCCccCHHHHHHHHHHcCCEEEEECcchh-cccccCccCCC
Confidence 888876445678999999988642 36777776444698899988865 6999999999999988 764 445
Q ss_pred CCCCCCcEEEEccccCCCCCCCceEEEEEe-CCCc
Q 035915 300 LALHRPDFVLCNLDNTQNAQPSKITCLLIR-KKSF 333 (344)
Q Consensus 300 Ls~l~~DFvv~S~HK~l~G~P~GiG~L~Vr-~~~~ 333 (344)
+. ++|++++|+||+ +++|.| |+++.+ ++..
T Consensus 216 ~~--~~di~~~S~~K~-l~g~~g-g~i~~~~~~~~ 246 (416)
T PRK00011 216 VP--HADVVTTTTHKT-LRGPRG-GLILTNDEELA 246 (416)
T ss_pred CC--CCcEEEecCCcC-CCCCCc-eEEEeCCHHHH
Confidence 55 689999999999 766865 555554 3443
No 52
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=3.5e-15 Score=151.33 Aligned_cols=162 Identities=14% Similarity=-0.010 Sum_probs=120.0
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCH--HHHHHHHHcCCcEEE
Q 035915 150 PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEEL--DYVREFASFKESKVI 226 (344)
Q Consensus 150 ~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~--~~ir~la~~~G~kV~ 226 (344)
.++......++.++++++++|+. +.|+|++|+ +|+.+++.++ +++||+|+ +..+|.. ..+...+.+.|+++.
T Consensus 63 Y~r~~~pt~~~le~~la~l~g~~---~~v~fsSG~-~Ai~~al~~l-l~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~ 137 (437)
T PRK05613 63 YSRLTNPTVEALENRIASLEGGV---HAVAFASGQ-AAETAAILNL-AGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVT 137 (437)
T ss_pred eeCccChHHHHHHHHHHHHhCCC---eEEEeCCHH-HHHHHHHHHh-cCCCCEEEECCCccHHHHHHHHHHHHhcCeEEE
Confidence 33444456789999999999984 257777777 7777777776 68899865 5667762 233344566899999
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCC
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALH 303 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l 303 (344)
+++ +. .+.+++++.+++ +|++|.+.+.+| |.++||+.|.+ ||++|+++++|++|+. |.. .+.-++
T Consensus 138 ~vd-~~----~d~e~l~~~l~~-----~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~a~-g~~-~~p~~~ 205 (437)
T PRK05613 138 FVE-NP----DDPESWQAAVQP-----NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTIAT-AAL-VRPLEL 205 (437)
T ss_pred EEC-CC----CCHHHHHHhCCc-----cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCCcc-ccc-cChHHh
Confidence 987 21 156788888875 366666655554 99999988865 6999999999999998 765 333357
Q ss_pred CCcEEEEccccCCCCCC-CceEEEEEe
Q 035915 304 RPDFVLCNLDNTQNAQP-SKITCLLIR 329 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P-~GiG~L~Vr 329 (344)
++|++++|+||| ++++ .++|.+++.
T Consensus 206 GaDivv~S~~K~-l~G~gd~~gG~vv~ 231 (437)
T PRK05613 206 GADVVVASLTKF-YTGNGSGLGGVLID 231 (437)
T ss_pred CCCEEEeeccce-ecCCCcceeEEEEe
Confidence 899999999999 8854 356887774
No 53
>PRK04311 selenocysteine synthase; Provisional
Probab=99.63 E-value=6.2e-15 Score=150.64 Aligned_cols=164 Identities=12% Similarity=0.049 Sum_probs=121.8
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC----HHHHHHHHHcCCcEEEEE
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE----LDYVREFASFKESKVILA 228 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~----~~~ir~la~~~G~kV~~v 228 (344)
....++.+++.+++++|+. ..++++|+|.|+++++.++ .+|++++ +..+|. ...+.+..++.|++++++
T Consensus 125 ~g~r~~~~e~~lA~l~Gae----~a~vv~sgtaAl~l~l~~l--~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v 198 (464)
T PRK04311 125 RGSRDRALAALLCALTGAE----DALVVNNNAAAVLLALNAL--AAGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEV 198 (464)
T ss_pred cchHHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHh--CCCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEE
Confidence 3456789999999999985 3677788889999988765 6889865 444443 222334456679999988
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc----c--ccccHHHHH-HHHhCCcEEEecccccCc--------
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN----G--TRYSMHWIS-EAHRNSWHVLLDATALVV-------- 293 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN----G--~i~Pl~~Ia-~ar~~g~~vlvDAaQa~~-------- 293 (344)
+.+. ..+.+++++++++ +|+++.+.+.+| | ...|++.|. .+|++|+++++|+++...
T Consensus 199 ~~~~---~t~~~dle~aI~~-----~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl 270 (464)
T PRK04311 199 GTTN---RTHLRDYEQAINE-----NTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGL 270 (464)
T ss_pred CCCC---CCCHHHHHHhcCc-----cCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccC
Confidence 7643 3467889998875 478888888876 5 568998775 479999999999954221
Q ss_pred CCccCCCC---CCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 294 GEDRLNLA---LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 294 G~~~LDLs---~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
++.+ ++. ++++|+++||+||| +||| ..|+++++++..+
T Consensus 271 ~~~p-~~~~~l~~GaDiv~fSg~K~-LgGp-~~G~i~g~~~li~ 311 (464)
T PRK04311 271 PDEP-TVQELLAAGVDLVTFSGDKL-LGGP-QAGIIVGKKELIA 311 (464)
T ss_pred CCCC-chhhHHhcCCcEEEecCccc-ccCC-ceEEEEEcHHHHH
Confidence 1223 333 37999999999999 8889 5899999987664
No 54
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.63 E-value=1.1e-14 Score=144.65 Aligned_cols=156 Identities=13% Similarity=0.022 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEeCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp~~~~ 233 (344)
..++.++++++++|++ + .|+| ++++.|+++++. + +++||+|+ +...|. ...++.++++.|+++++++.+
T Consensus 48 ~~~~le~~la~l~g~~-~--~l~~-~sG~~al~~~l~-l-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~-- 119 (378)
T TIGR01329 48 TRTALESLLAKLDKAD-R--AFAF-SSGMAALDVITR-L-LNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTT-- 119 (378)
T ss_pred HHHHHHHHHHHHhCCC-c--EEEE-CCHHHHHHHHHH-H-hCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCC--
Confidence 4678899999999983 2 3555 555669998776 3 58899865 455665 234566677789999998763
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEEE
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLC 310 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~ 310 (344)
+.+++++.+++ ++++|.+...+| |.++|++.|.+ ||++|+++++|++|+. +.....+ .+++|++++
T Consensus 120 ----d~~~le~~i~~-----~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~-~~~~~~l-~~g~Di~v~ 188 (378)
T TIGR01329 120 ----DLDKVKAALGP-----KTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMS-PLLCNPL-ELGADIVYH 188 (378)
T ss_pred ----CHHHHHHhcCc-----CceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc-cccCChh-hcCCcEEEE
Confidence 56788888864 478999888777 99999987764 6999999999999988 7654444 468999999
Q ss_pred ccccCCCCCCCc--eEEEEEeCCC
Q 035915 311 NLDNTQNAQPSK--ITCLLIRKKS 332 (344)
Q Consensus 311 S~HK~l~G~P~G--iG~L~Vr~~~ 332 (344)
|+||| +++|.+ .|+++++++.
T Consensus 189 S~tK~-l~G~~~~~~G~v~~~~~~ 211 (378)
T TIGR01329 189 SATKF-LAGHSDVMAGVLAVKGEE 211 (378)
T ss_pred eccee-ccCCccceeEEEEeCcHH
Confidence 99999 777877 8889887654
No 55
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=1.5e-14 Score=145.16 Aligned_cols=162 Identities=10% Similarity=-0.002 Sum_probs=125.7
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC--HHHHHHHHHcCCcEEEE
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE--LDYVREFASFKESKVIL 227 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~--~~~ir~la~~~G~kV~~ 227 (344)
++...-..+...++||++-|+. ..+++++++.|++.++.++ +++||+++. ...|. ...++.++++.|++|.+
T Consensus 57 sR~~nPt~~~le~~la~LEg~~----~a~~~~SGmaAi~~~~~~l-l~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~ 131 (395)
T PRK08114 57 GRRGTLTHFSLQEAMCELEGGA----GCALYPCGAAAVANAILAF-VEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTW 131 (395)
T ss_pred cCCCChhHHHHHHHHHHHhCCC----eEEEEhHHHHHHHHHHHHH-cCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEE
Confidence 3434344566777889988874 3566777999999988887 789999764 44454 23344556778999999
Q ss_pred EeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhC--CcEEEecccccCcCCccCCCCC
Q 035915 228 APEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRN--SWHVLLDATALVVGEDRLNLAL 302 (344)
Q Consensus 228 vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~--g~~vlvDAaQa~~G~~~LDLs~ 302 (344)
++.. +.+++++++++ +|+||.+.+.+| |.++||+.|.+ +|++ |++++||++|+. |.. ++..+
T Consensus 132 vd~~------d~~~l~~~l~~-----~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~-p~~-~~pl~ 198 (395)
T PRK08114 132 FDPL------IGADIAKLIQP-----NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTWAA-GVL-FKALD 198 (395)
T ss_pred ECCC------CHHHHHHhcCC-----CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCCcc-ccc-cCHHH
Confidence 8742 45778888875 479999998887 99999988865 6886 599999999999 977 89889
Q ss_pred CCCcEEEEccccCCCCCCC--ceEEEEEeCC
Q 035915 303 HRPDFVLCNLDNTQNAQPS--KITCLLIRKK 331 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~--GiG~L~Vr~~ 331 (344)
+++||++.|+||| ++||. +.|+++.+++
T Consensus 199 ~GaDivv~S~tKy-l~Ghsdv~~G~v~~~~~ 228 (395)
T PRK08114 199 FGIDISIQAGTKY-LVGHSDAMIGTAVANAR 228 (395)
T ss_pred cCCcEEEEcCccc-ccCCCcceeEEEEcCHH
Confidence 9999999999999 77785 7787776654
No 56
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.62 E-value=5.2e-15 Score=141.24 Aligned_cols=167 Identities=11% Similarity=0.005 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
..+.++++.+|+++|++ . .+++|+|+|+|++.++.++ +++||.|+ ....|... ...+...|+++++++.+...
T Consensus 59 g~i~~~~~~~A~~~ga~-~--~~~~~~Gst~a~~~~l~al-~~~gd~Vlv~~~~h~s~--~~~~~~~g~~~~~v~~~~~~ 132 (294)
T cd00615 59 GPIKEAQELAARAFGAK-H--TFFLVNGTSSSNKAVILAV-CGPGDKILIDRNCHKSV--INGLVLSGAVPVYLKPERNP 132 (294)
T ss_pred hHHHHHHHHHHHHhCCC-C--EEEEcCcHHHHHHHHHHHc-CCCCCEEEEeCCchHHH--HHHHHHCCCEEEEecCccCc
Confidence 46789999999999985 2 4555999999999988887 57899865 45555532 12223468888888765322
Q ss_pred -----CccCHHHHHHHhhhcCCCCCeeEEEEeCcc-ccccccHHHHHH-HHhCCcEEEecccccCc----CCccCCCCCC
Q 035915 235 -----LRIKGSQLSQYFRRKCKHTPKGLFSYPADI-NGTRYSMHWISE-AHRNSWHVLLDATALVV----GEDRLNLALH 303 (344)
Q Consensus 235 -----g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-NG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~----G~~~LDLs~l 303 (344)
+.++.++|++.+++. .++++|.++..+ .|.++|+++|.+ +|++|+++++|++|... +..+.+...+
T Consensus 133 ~~~~~~~i~~~~l~~~l~~~---~~~k~v~l~~p~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~ 209 (294)
T cd00615 133 YYGIAGGIPPETFKKALIEH---PDAKAAVITNPTYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMA 209 (294)
T ss_pred ccCcCCCCCHHHHHHHHHhC---CCceEEEEECCCCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhc
Confidence 368999999998642 246777777543 399999987765 69999999999999750 2334455567
Q ss_pred CCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 304 RPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
++|+++.|+||+ +++|++.|+|+++++.
T Consensus 210 ~~div~~S~hK~-l~g~~~~~~l~~~~~~ 237 (294)
T cd00615 210 GADIVVQSTHKT-LPALTQGSMIHVKGDL 237 (294)
T ss_pred CCcEEEEchhcc-cchHhHHHHHHhCCCc
Confidence 899999999999 7778888999888763
No 57
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.61 E-value=4e-14 Score=135.93 Aligned_cols=159 Identities=9% Similarity=-0.025 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLDL 235 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~g 235 (344)
...+.|+.+++++|++ .++||+|+|+|+++++.++.+.+|++++ ...+|+.. ...+...|++++.++.+..++
T Consensus 19 ~~~~~~~~la~~~~~~----~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~ 92 (352)
T cd00616 19 KVREFEKAFAEYLGVK----YAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT--ANAILLLGATPVFVDIDPDTY 92 (352)
T ss_pred HHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH--HHHHHHcCCeEEEEecCCCcC
Confidence 5678999999999972 4899999999999999988778899865 55665532 122345699999998875456
Q ss_pred ccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccccCcCCccCCCC-CCCCcEEEEccc
Q 035915 236 RIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLA-LHRPDFVLCNLD 313 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs-~l~~DFvv~S~H 313 (344)
.++.++|++.+++ ++++|.+++ .+|...|++.|.+ |+++|+++++|++|++ |....+.. ....|+.++|+|
T Consensus 93 ~~d~~~l~~~i~~-----~~~~v~~~~-~~G~~~~~~~i~~l~~~~~i~li~D~a~~~-g~~~~~~~~~~~~d~~~~S~~ 165 (352)
T cd00616 93 NIDPELIEAAITP-----RTKAIIPVH-LYGNPADMDAIMAIAKRHGLPVIEDAAQAL-GATYKGRKVGTFGDAGAFSFH 165 (352)
T ss_pred CcCHHHHHHhcCc-----CCeEEEEEC-CCCCcCCHHHHHHHHHHcCCeEEEECCCCC-CCeECCEEcccCcceeEEcCC
Confidence 7889999988854 467777764 2599999987754 6899999999999999 87653311 122689999976
Q ss_pred --cCCCCCCCceEEEEEeC
Q 035915 314 --NTQNAQPSKITCLLIRK 330 (344)
Q Consensus 314 --K~l~G~P~GiG~L~Vr~ 330 (344)
|| +++|. .|+++.++
T Consensus 166 ~~K~-~~~~~-gg~~~~~~ 182 (352)
T cd00616 166 PTKN-LTTGE-GGAVVTND 182 (352)
T ss_pred CCCC-CcccC-ceEEEECC
Confidence 99 75443 35566554
No 58
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.60 E-value=2.5e-14 Score=146.28 Aligned_cols=169 Identities=13% Similarity=0.003 Sum_probs=119.3
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHH--HHhhCCCCCCC----eE-EEcCCcCHHHHHHHHHcCCcEEE
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMML--VGESYPFFRGN----FY-MTIIGEELDYVREFASFKESKVI 226 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnl--va~sl~~~~Gd----~i-vS~~eH~~~~ir~la~~~G~kV~ 226 (344)
..+.+.+.++.+++++|++.. .+.-++|+++.+.. ++..+...+|+ ++ ++..+|+.+. ..++..|++++
T Consensus 111 ~lel~~~~~~~la~l~G~~~~--~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~--~~~~~~G~~vv 186 (481)
T PRK04366 111 ALELMYELQEWLKEITGMDAV--TLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNP--ASAAMAGFKVV 186 (481)
T ss_pred HHHHHHHHHHHHHHHhCCCce--EEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHH--HHHHHcCCEEE
Confidence 335679999999999999622 23333444444432 23333334454 54 5677777432 23456799999
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-cccc-ccHHHHHH-HHhCCcEEEecccccCcCCc-cCCCCC
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-NGTR-YSMHWISE-AHRNSWHVLLDATALVVGED-RLNLAL 302 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-NG~i-~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~-~LDLs~ 302 (344)
.+|.+. ++.++.++|++++++ ++++|.++.-+ +|.+ .|++.|.+ +|++|++++||++|++ +.. .++..+
T Consensus 187 ~v~~~~-~~~~D~e~L~~~i~~-----~t~~V~v~~Pn~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~-~~~g~~~~~~ 259 (481)
T PRK04366 187 EIPSNE-DGLVDLEALKAAVGE-----DTAALMLTNPNTLGLFERNILEIAEIVHEAGGLLYYDGANLN-AILGKARPGD 259 (481)
T ss_pred EeecCC-CCCcCHHHHHhhccc-----CCeEEEEeCCCCccccchHHHHHHHHHHHcCCEEEEEecChh-hhcccCCccc
Confidence 999874 578999999988865 36777776544 3877 58977754 7999999999999997 633 457778
Q ss_pred CCCcEEEEccccCCCCCCC-----ceEEEEEeCCCcc
Q 035915 303 HRPDFVLCNLDNTQNAQPS-----KITCLLIRKKSFD 334 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~-----GiG~L~Vr~~~~~ 334 (344)
+++|++++++||| ||+|. |+|+|++|++..+
T Consensus 260 ~GaD~~~~~~hK~-l~~P~g~Ggp~~G~l~~~~~~~~ 295 (481)
T PRK04366 260 MGFDVVHLNLHKT-FSTPHGGGGPGSGPVGVKEELAP 295 (481)
T ss_pred cCCCEEEEechhh-cCCCCCCCCCCeeeeeehhhhHh
Confidence 9999999999999 76554 5679999876543
No 59
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.59 E-value=3.7e-14 Score=139.04 Aligned_cols=185 Identities=14% Similarity=0.049 Sum_probs=126.2
Q ss_pred cccchHHHHHHhhccCCCCh---hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-Ec
Q 035915 131 RTQLEPSRLLDILTKKSSFP---GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TI 206 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gnss~~---g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~ 206 (344)
.+++..+.+.+...+++.+. |. .....+.|+.+|+++|++ + ++.++|+++|++.+..++ +++||+++ ..
T Consensus 57 v~~~~~~~~~~~~~~~~~s~~~~G~--~~~~~~le~~ia~~~g~~-~---~ii~~~~~~a~~~~~~~l-~~~gd~vi~~~ 129 (393)
T TIGR01822 57 LIQAAKDALDEHGFGMSSVRFICGT--QDIHKELEAKIAAFLGTE-D---TILYASCFDANGGLFETL-LGAEDAIISDA 129 (393)
T ss_pred HHHHHHHHHHHhCCCCCCcCcccCC--hHHHHHHHHHHHHHhCCC-c---EEEECchHHHHHHHHHHh-CCCCCEEEEec
Confidence 56666666666434543222 22 345688999999999984 2 444478889999998888 78999965 56
Q ss_pred CCcCHHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCC-CCCeeEEEEeCccc--cccccHHHHHH-HHhCCc
Q 035915 207 IGEELDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCK-HTPKGLFSYPADIN--GTRYSMHWISE-AHRNSW 282 (344)
Q Consensus 207 ~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~-~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~ 282 (344)
.+|+.. + ..++..+.+...++ .++.++|++.+++... ..++++|++.+++| |.+.|++.|.+ ++++|+
T Consensus 130 ~~~~s~-~-~~~~~~~~~~~~~~------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~ 201 (393)
T TIGR01822 130 LNHASI-I-DGVRLCKAKRYRYA------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDA 201 (393)
T ss_pred cccHHH-H-HHHHhcCCceEEeC------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCC
Confidence 666632 1 11222233333222 2567788888864211 12578999887765 99999987765 699999
Q ss_pred EEEecccccCcCCcc---------CCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 283 HVLLDATALVVGEDR---------LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 283 ~vlvDAaQa~~G~~~---------LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
++++|++|+. |... +++. .++|++++|+||+ ++++ .+|+++.+++..+
T Consensus 202 ~li~De~~~~-g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~-l~g~-r~G~~~~~~~~~~ 258 (393)
T TIGR01822 202 LVMVDECHAT-GFLGPTGRGSHELCGVM-GRVDIITGTLGKA-LGGA-SGGFTTARKEVVE 258 (393)
T ss_pred EEEEECCccc-cCcCCCCCchHHhcCCC-CCCeEEEEEChHH-hhCC-CcEEEEeCHHHHH
Confidence 9999999988 7653 2222 2689999999999 8766 4699988776544
No 60
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.59 E-value=1.4e-14 Score=142.68 Aligned_cols=168 Identities=17% Similarity=-0.031 Sum_probs=119.2
Q ss_pred hhhhhhHHHHH-HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHH--HH-HHHHHcCCcE
Q 035915 150 PGSFISIPEIQ-ARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELD--YV-REFASFKESK 224 (344)
Q Consensus 150 ~g~~as~~le~-AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~--~i-r~la~~~G~k 224 (344)
.|......+++ +|+.+++++|++.. .|++| |+|+|+++++.++ +++||+|+ ...+|... .+ ...++..|.+
T Consensus 58 ~~~~~~~~l~~~~~~~~~~~~g~~~~--~v~~~-sgt~a~~~~l~~l-~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~ 133 (402)
T cd00378 58 GGCEYVDEIEDLAIERAKKLFGAEYA--NVQPH-SGSQANLAVYFAL-LEPGDTIMGLDLSHGGHLTHGSFTKVSASGKL 133 (402)
T ss_pred CCchHHHHHHHHHHHHHHHHhCCCce--eeecC-CcHHHHHHHHHHh-cCCCCEEEEecCccCcccccccccccccccee
Confidence 34444455555 78899999999743 45556 4689999999988 68999864 55555521 11 1113446887
Q ss_pred EEEEeCCCC--CCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccccCcCCc-----
Q 035915 225 VILAPEAWL--DLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATALVVGED----- 296 (344)
Q Consensus 225 V~~vp~~~~--~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~----- 296 (344)
+..++.+.. ++.++.+++++.+... +++++.+...+||+..|++.|.+ ++++|+++++|++|+. |..
T Consensus 134 ~~~~~~~~~~~~~~id~~~l~~~i~~~----~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D~a~~~-g~~~~g~~ 208 (402)
T cd00378 134 FESVPYGVDPETGLIDYDALEKMALEF----KPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVDMAHVA-GLVAGGVF 208 (402)
T ss_pred EEEecCCcCcccCCcCHHHHHHHHHhC----CCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEEccchh-hhhhcccC
Confidence 777766433 5789999999988632 36777776555799999988865 6999999999999987 753
Q ss_pred cCCCCCCCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 297 RLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 297 ~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
+.++. ++|++++|+||| |++|+|.++ +.++
T Consensus 209 ~~~~~--~~dv~~~s~sK~-l~G~~gg~i-~~~~ 238 (402)
T cd00378 209 PNPLP--GADVVTTTTHKT-LRGPRGGLI-LTRK 238 (402)
T ss_pred CCccc--CCcEEEeccccC-CCCCCceEE-Eecc
Confidence 34444 689999999999 766976444 4444
No 61
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.58 E-value=4.5e-14 Score=140.73 Aligned_cols=161 Identities=12% Similarity=-0.021 Sum_probs=121.2
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEE
Q 035915 150 PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVI 226 (344)
Q Consensus 150 ~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~ 226 (344)
.++......++.++++|+++|++ . .|+|++ ++.++.++.. -+++||+++ +..+|+ ...+..++++.|++++
T Consensus 48 y~r~~~p~~~~le~~lA~l~g~~-~--~v~~~s-G~~ai~~~l~--~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~ 121 (390)
T PRK08064 48 YSRSGNPTREALEDIIAELEGGT-K--GFAFAS-GMAAISTAFL--LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHT 121 (390)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC-C--eEEECC-HHHHHHHHHH--HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEE
Confidence 34444456788999999999986 2 466644 4668877665 357899854 566666 2345556677899999
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCC
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALH 303 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l 303 (344)
.++.+ +.+++++++++ +|++|.+...+| |.+.|++.|.+ +|++|+++++|++++. +.....+ ++
T Consensus 122 ~v~~~------d~~~l~~~l~~-----~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~~-~~~~~~~-~~ 188 (390)
T PRK08064 122 FVDMT------NLEEVAQNIKP-----NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFLT-PLLQKPL-DL 188 (390)
T ss_pred EECCC------CHHHHHHhcCC-----CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCCc-ccccCch-hh
Confidence 98763 45778888765 478998887777 99999987764 6999999999999998 7653333 46
Q ss_pred CCcEEEEccccCCCCCCCc--eEEEEEeC
Q 035915 304 RPDFVLCNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
++|+++.|+||| +++|.| .|++++++
T Consensus 189 g~Divv~S~tK~-~~G~~~~laG~~v~~~ 216 (390)
T PRK08064 189 GADVVLHSATKF-LAGHSDVLAGLAVVKD 216 (390)
T ss_pred CCcEEEeeccee-ccCCccceeEEEEeCC
Confidence 899999999999 888887 48888764
No 62
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.58 E-value=4.1e-14 Score=139.18 Aligned_cols=160 Identities=13% Similarity=0.027 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLDL 235 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~g 235 (344)
...+.|+++++++|++ + .++++|+|+|+++++.++.+++||+++ +...|.. ....+...|++++.++++..++
T Consensus 30 ~~~~le~~la~~~g~~---~-~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~--~~~~~~~~G~~~~~~~~~~~~~ 103 (380)
T TIGR03588 30 TVPAFEEALAEYVGAK---Y-AVAFNSATSALHIACLALGVGPGDRVWTTPITFVA--TANCALYCGAKVDFVDIDPDTG 103 (380)
T ss_pred hHHHHHHHHHHHHCCC---e-EEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHH--HHHHHHHcCCEEEEEecCCCcC
Confidence 3577899999999984 2 445557899999999998888999865 5555442 2233456799999999865456
Q ss_pred ccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCC----cEEEE
Q 035915 236 RIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRP----DFVLC 310 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~----DFvv~ 310 (344)
.++.++|++.++.. +..++++|.+++. +|...|++.|.+ |+++|+++++|++|++ |.. ++...++. |+.++
T Consensus 104 ~~d~~~l~~~i~~~-~~~~t~~v~~~~~-~G~~~~~~~i~~l~~~~~~~lI~D~a~a~-g~~-~~~~~~g~~~~~d~~~~ 179 (380)
T TIGR03588 104 NIDEDALEKKLAAA-KGKLPKAIVPVDF-AGKSVDMQAIAALAKKHGLKIIEDASHAL-GAE-YGGKPVGNCRYADATVF 179 (380)
T ss_pred CcCHHHHHHHhhcc-cCCCceEEEEeCC-CCccCCHHHHHHHHHHcCCEEEEECCCcc-cCc-cCCEeCCCccccceEEE
Confidence 78999999988721 0014677765432 599999987765 6899999999999999 976 66666666 99999
Q ss_pred ccc--cCCCCCCCceEEEEE
Q 035915 311 NLD--NTQNAQPSKITCLLI 328 (344)
Q Consensus 311 S~H--K~l~G~P~GiG~L~V 328 (344)
|+| || ++.|. -|+++.
T Consensus 180 S~~~~K~-~~~~~-GG~v~~ 197 (380)
T TIGR03588 180 SFHPVKI-ITTAE-GGAVTT 197 (380)
T ss_pred ecCCCCc-ccccC-ceEEEE
Confidence 999 88 65442 333443
No 63
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.55 E-value=1.5e-13 Score=135.16 Aligned_cols=161 Identities=10% Similarity=-0.012 Sum_probs=110.0
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCC
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~ 232 (344)
....++++|+++|+++|++ + .++||+|++..+. ++..+ .++|+.+++ ..+|... +..+....+..+.+ +
T Consensus 54 ~~~~~~~~e~~la~~~~~~-~--~l~~~sG~~a~~~-~~~~~-~~~~d~ii~d~~~H~sv-~~~~~~~~~~~~~~-~--- 123 (370)
T PRK05937 54 PSSLLDDLEHKIAHFHGAP-E--AFIVPSGYMANLG-LCAHL-SSVTDYVLWDEQVHISV-VYSLSVISGWHQSF-R--- 123 (370)
T ss_pred ChHHHHHHHHHHHHHhCCC-e--EEEECChHHHHHH-HHHHh-CCCCCEEEEEhhhhHHH-HHHHHHcCCceEEe-c---
Confidence 5567899999999999995 3 5889988865443 33333 246778765 6666522 22222122444332 2
Q ss_pred CCCccCHHHHHHHhhhcCCC-CCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCC----CCC
Q 035915 233 LDLRIKGSQLSQYFRRKCKH-TPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLA----LHR 304 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~-~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs----~l~ 304 (344)
..+.++|++.++...+. ..+.+|++++++| |.++|+++|.+ ++++|++++||++|++ |+.+.+.. .++
T Consensus 124 ---~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~-G~~g~~g~g~~~~~~ 199 (370)
T PRK05937 124 ---HNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAM-GIFGDDGKGFCHSLG 199 (370)
T ss_pred ---CCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc-cccCCCCCchHHhhC
Confidence 24678888888632111 2356777887775 99999988865 6889999999999999 99888863 233
Q ss_pred ---CcEEEEccccCCCCCCCceEEEEEeC
Q 035915 305 ---PDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 305 ---~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
.|.+++|++|+ || |.|.|+|+.++
T Consensus 200 ~~~~~~~~~tlsK~-~g-~~G~~vl~~~~ 226 (370)
T PRK05937 200 YENFYAVLVTYSKA-LG-SMGAALLSSSE 226 (370)
T ss_pred CCCCcEEEEechhh-hh-cCceEEEcCHH
Confidence 23566788898 87 88999998754
No 64
>PLN02271 serine hydroxymethyltransferase
Probab=99.55 E-value=1.2e-13 Score=143.19 Aligned_cols=167 Identities=13% Similarity=0.020 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHcCCCCCCC--eEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC---HHHHH----HHHHcCCcEEE
Q 035915 157 PEIQARNKVLKHCGLPDDEY--LVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE---LDYVR----EFASFKESKVI 226 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey--~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~---~~~ir----~la~~~G~kV~ 226 (344)
...-|.++..++||++.+++ +|- --+++.|+..+..++ +++||.|++ ..+|. ..... ..+...|..+.
T Consensus 195 iE~la~era~~lF~~~~~~~gaNVQ-p~SGs~AN~aV~~AL-l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~ 272 (586)
T PLN02271 195 IERLCCERALAAFGLDSEKWGVNVQ-PYSCTSANFAVYTGL-LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFE 272 (586)
T ss_pred HHHHHHHHHHHHhCCccccccccee-eccHHHHHHHHHHHh-cCCCCEEEEecCCCCCchhcccccccccccccccceEE
Confidence 44788899999999876433 222 238888999999888 899999875 66655 11110 12344566666
Q ss_pred EEe--CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccccCcCCccCCCC--
Q 035915 227 LAP--EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLA-- 301 (344)
Q Consensus 227 ~vp--~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs-- 301 (344)
.+| ++..++.||.++|++.... .+++|+.+.+.++-..+|++.+++ |++.|+++++|++|.+ |.+..++-
T Consensus 273 ~vpY~~d~~~g~IDyd~lek~a~~----~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~AH~a-GLIa~g~~~s 347 (586)
T PLN02271 273 SLPYKVNPQTGYIDYDKLEEKALD----FRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDMAHIS-GLVAAKECVN 347 (586)
T ss_pred EEEcccccccCccCHHHHHHHhhh----cCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEECcccc-cccccCcCCC
Confidence 666 5555688999999985433 258899998877778899988875 5899999999999999 99977743
Q ss_pred -CCCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 302 -LHRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 302 -~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
...+|+++++.||| +.||.| |++++|++.
T Consensus 348 P~~~aDvvt~TTHKt-LrGPrG-G~I~~r~~~ 377 (586)
T PLN02271 348 PFDYCDIVTSTTHKS-LRGPRG-GIIFYRKGP 377 (586)
T ss_pred CCcCCcEEEeCCccc-CCCCCc-eEEEecccc
Confidence 23689999999999 666999 888888753
No 65
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.55 E-value=4e-13 Score=133.03 Aligned_cols=176 Identities=9% Similarity=0.001 Sum_probs=127.1
Q ss_pred chHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHH
Q 035915 134 LEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELD 212 (344)
Q Consensus 134 ~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~ 212 (344)
.+.+.+.+.+.....+.| ....+.++++|+++|++ .+++|+|+|+|+++++.++.+.+||+++ +...|...
T Consensus 15 ~e~~~~~~~l~~~~~~~g----~~~~~le~~la~~~g~~----~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~ 86 (379)
T PRK11658 15 EELAAVKEVLRSGWITTG----PKNQALEQAFCQLTGNQ----HAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVST 86 (379)
T ss_pred HHHHHHHHHHHcCCccCC----HhHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHH
Confidence 345555554433322222 24678899999999984 3789999999999999998778999865 45555422
Q ss_pred HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEeccccc
Q 035915 213 YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATAL 291 (344)
Q Consensus 213 ~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa 291 (344)
...+...|++++.++.+..+..++.++|++.+++ ++++|...+ ..|...|++.|.+ |+++|+++++|++|+
T Consensus 87 --~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-----~tkav~~~~-~~G~~~d~~~i~~~a~~~gi~vi~D~a~a 158 (379)
T PRK11658 87 --LNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-----RTKAIIPVH-YAGAPADLDAIRAIGERYGIPVIEDAAHA 158 (379)
T ss_pred --HHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-----CCeEEEEeC-CCCCcCCHHHHHHHHHHcCCeEEEECCCc
Confidence 1223456999999998765556899999998875 366665332 2599999987765 699999999999999
Q ss_pred CcCCccC--CCCCCCCcEEEEccccCCCCCCCceEEEEEe
Q 035915 292 VVGEDRL--NLALHRPDFVLCNLDNTQNAQPSKITCLLIR 329 (344)
Q Consensus 292 ~~G~~~L--DLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr 329 (344)
+ |.... ++..++.|+++|+.+|+ +.+ |-|.+++.
T Consensus 159 ~-g~~~~~~~~g~~g~~~~Sf~~~K~-l~~--g~GG~v~~ 194 (379)
T PRK11658 159 V-GTYYKGRHIGARGTAIFSFHAIKN-ITC--AEGGLVVT 194 (379)
T ss_pred c-CCeECCeecCCCCCEEEeCCCCCc-Ccc--cCceEEEE
Confidence 9 87654 36667789999999998 543 44555553
No 66
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.54 E-value=2e-13 Score=130.77 Aligned_cols=163 Identities=11% Similarity=0.032 Sum_probs=113.5
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCC
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~ 232 (344)
.....++.|+.+++++|++ + .|+ +.++|+++..+..++ +.+|++|+ ...+|.. ....++..|+++..++.
T Consensus 44 ~~~~~~~l~~~la~~~~~~-~--~iv-~~sg~~a~~~~~~~~-~~~gd~Vl~~~~~~~~--~~~~~~~~g~~~~~~~~-- 114 (349)
T cd06454 44 TSDLHEELEEELAEFHGKE-A--ALV-FSSGYAANDGVLSTL-AGKGDLIISDSLNHAS--IIDGIRLSGAKKRIFKH-- 114 (349)
T ss_pred CchHHHHHHHHHHHHhCCC-C--EEE-eccHHHHHHHHHHHh-cCCCCEEEEehhhhHH--HHHHHHHcCCceEEecC--
Confidence 3556789999999999984 2 355 455577776666655 46899865 4445442 12234456888877652
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH-HHHhCCcEEEecccccCcCCcc--------CCCC
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS-EAHRNSWHVLLDATALVVGEDR--------LNLA 301 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia-~ar~~g~~vlvDAaQa~~G~~~--------LDLs 301 (344)
++.++++++++......++++|.+.+.+| |.+.|++.|. .|+++|+++++|++|+. |..+ ++..
T Consensus 115 ----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~-g~~~~~~~~~~~~~~~ 189 (349)
T cd06454 115 ----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSV-GVYGPHGRGVEEFGGL 189 (349)
T ss_pred ----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccc-cccCCCCCChhhhccc
Confidence 35667888876421012467888876654 9999998775 47999999999999998 7653 2334
Q ss_pred CCCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 302 LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 302 ~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
..++|+++.|+||+ || +.| |+++.+++..
T Consensus 190 ~~~~~i~~~s~sK~-~~-~~g-G~i~~~~~~~ 218 (349)
T cd06454 190 TDDVDIIMGTLGKA-FG-AVG-GYIAGSKELI 218 (349)
T ss_pred cccCcEEEeechhh-hc-ccC-CEEECCHHHH
Confidence 56789999999999 88 446 7777666543
No 67
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.53 E-value=1.3e-13 Score=151.32 Aligned_cols=159 Identities=16% Similarity=0.103 Sum_probs=123.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCC--CeE-EEcCCcC--HHHHHHHHHcCCcEEEEEe
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRG--NFY-MTIIGEE--LDYVREFASFKESKVILAP 229 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~G--d~i-vS~~eH~--~~~ir~la~~~G~kV~~vp 229 (344)
-+.+.+.|..|++++|++++ ++.|+.|+|++++.++.++++.+| ++| ++..+|+ ...|+.+++..|++|+.+|
T Consensus 147 lqal~~~Qt~ia~LtG~~~a--naSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~ 224 (993)
T PLN02414 147 LESLLNYQTMITDLTGLPMS--NASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVAD 224 (993)
T ss_pred HHHHHHHHHHHHHHhCCChh--hEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEec
Confidence 34679999999999999987 799999999999999888887755 555 5788888 3467888888999999998
Q ss_pred CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-ccccccHHHHH-HHHhCCcEEEecccccCcCCccC-CCCCCCCc
Q 035915 230 EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-NGTRYSMHWIS-EAHRNSWHVLLDATALVVGEDRL-NLALHRPD 306 (344)
Q Consensus 230 ~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-NG~i~Pl~~Ia-~ar~~g~~vlvDAaQa~~G~~~L-DLs~l~~D 306 (344)
.+..+ .... .+..+.++.-+ +|.+.|++.|. .+|++|++++| |+|.+ +...+ +..++++|
T Consensus 225 ~~~~~----------~~~~-----~v~~vlvq~P~~~G~v~dv~~I~~~ah~~GaL~iV-aad~l-al~~l~~pge~GAD 287 (993)
T PLN02414 225 EKDFD----------YSSG-----DVCGVLVQYPATDGEVLDYAEFVKNAHANGVKVVM-ATDLL-ALTMLKPPGEWGAD 287 (993)
T ss_pred chhhc----------cccC-----ceEEEEEecCCCCeEEcCHHHHHHHHHHcCCEEEE-EECHH-HhcCCCCHhhccCc
Confidence 74311 0010 12122222223 39999998775 57999999999 99999 99888 58899999
Q ss_pred EEEEccccCCC-----CCCCceEEEEEeCCCcc
Q 035915 307 FVLCNLDNTQN-----AQPSKITCLLIRKKSFD 334 (344)
Q Consensus 307 Fvv~S~HK~l~-----G~P~GiG~L~Vr~~~~~ 334 (344)
|+++++||| . |||. +|+||+|++...
T Consensus 288 i~vgsgqKw-g~P~G~GGP~-aGflavr~~~~r 318 (993)
T PLN02414 288 IVVGSAQRF-GVPMGYGGPH-AAFLATSQEYKR 318 (993)
T ss_pred EEEECCCcc-ccCCCCCCCC-eeEEEECHHHHh
Confidence 999999999 4 5563 999999987543
No 68
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=3.2e-13 Score=136.68 Aligned_cols=156 Identities=10% Similarity=-0.028 Sum_probs=121.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp~~~ 232 (344)
...+...+++|++.|+. ..++|+|+++|+..++.++ +.+||+|+ ....|+ ...+...++..|++++.++..
T Consensus 64 p~~~~Le~~lA~leg~~----~al~~~sG~~Ai~~al~~l-l~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~- 137 (431)
T PRK08248 64 PTTDVFEKRIAALEGGI----GALAVSSGQAAITYSILNI-ASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPS- 137 (431)
T ss_pred chHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCC-
Confidence 34567788899999973 3788999999999888777 67899865 444454 234555667789999988753
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
+.+++++++++ ++++|.+.+.+| |.++|++.|.+ +|++|+++++|++++. +....++ ++++|+++
T Consensus 138 -----d~e~l~~ai~~-----~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a~-~~~~~pl-~~gaDivv 205 (431)
T PRK08248 138 -----DPENFEAAITD-----KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFAS-PYLLRPI-EHGADIVV 205 (431)
T ss_pred -----CHHHHHHhcCC-----CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCCc-cccCChh-HcCCCEEE
Confidence 56788888865 467888876666 99999987765 6999999999999997 6655555 57999999
Q ss_pred EccccCCCCCCC-ceEEEEEeC
Q 035915 310 CNLDNTQNAQPS-KITCLLIRK 330 (344)
Q Consensus 310 ~S~HK~l~G~P~-GiG~L~Vr~ 330 (344)
.|+||| +|+|. -+|.+++..
T Consensus 206 ~S~tK~-lgg~g~~~Gg~v~~~ 226 (431)
T PRK08248 206 HSATKF-IGGHGTSIGGVIVDS 226 (431)
T ss_pred EcCccc-cCCCCCceEEEEEeC
Confidence 999999 88774 288888854
No 69
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.53 E-value=3.2e-13 Score=137.06 Aligned_cols=159 Identities=11% Similarity=-0.035 Sum_probs=120.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEeCC
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp~~ 231 (344)
....++.++++|++.|+. ..+++++++.|+.+++.++ .++||+|+ +...|. .+.+...+.+.|+++..++ +
T Consensus 68 ~p~~~~Le~~lA~l~g~~----~av~~sSG~aAi~~al~al-l~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d 141 (436)
T PRK07812 68 NPTQDVVEQRIAALEGGV----AALLLASGQAAETFAILNL-AGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D 141 (436)
T ss_pred CchHHHHHHHHHHHhCCC----eEEEEccHHHHHHHHHHHH-hCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C
Confidence 345677888999999985 2677778888999888777 57899865 555555 2233444456789888885 2
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEE
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFV 308 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFv 308 (344)
. .+.+++++++++ ++++|.+.+.+| |.+.|++.|.+ +|++|+.++||++|+. |...-.+ ++++|++
T Consensus 142 ~----~d~e~l~~ai~~-----~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD~t~a~-~~~~~pl-~~GaDiv 210 (436)
T PRK07812 142 P----DDLDAWRAAVRP-----NTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVDNTIAT-PYLIRPL-EHGADIV 210 (436)
T ss_pred C----CCHHHHHHhCCC-----CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hcCCCEE
Confidence 2 267788888765 478898888876 99999988865 6999999999999998 7665444 4799999
Q ss_pred EEccccCCCCCCC-ceEEEEEeCC
Q 035915 309 LCNLDNTQNAQPS-KITCLLIRKK 331 (344)
Q Consensus 309 v~S~HK~l~G~P~-GiG~L~Vr~~ 331 (344)
+.|+||| +|++. .+|.+++...
T Consensus 211 v~S~tK~-lgg~G~~i~G~vv~~~ 233 (436)
T PRK07812 211 VHSATKY-LGGHGTAIAGVIVDGG 233 (436)
T ss_pred EEecccc-cCCCCCeEEEEEEcCC
Confidence 9999999 88662 2888888543
No 70
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.53 E-value=2.6e-13 Score=135.31 Aligned_cols=160 Identities=11% Similarity=0.024 Sum_probs=120.2
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEE
Q 035915 152 SFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILA 228 (344)
Q Consensus 152 ~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~v 228 (344)
+.....+++.|+++|+++|++ .+++|+|+++|+.+++.++ +++||+++ +...|. ...+...++..|++++.+
T Consensus 57 r~~~p~~~~le~~la~l~g~~----~~v~~ssG~~Ai~~al~al-~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~v 131 (390)
T PRK08133 57 RFTNPTVTMFQERLAALEGAE----ACVATASGMAAILAVVMAL-LQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFV 131 (390)
T ss_pred CCCChHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEE
Confidence 344456789999999999984 3788999999999888877 67899865 455565 233444556679999988
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRP 305 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~ 305 (344)
+.+ +.+++++++++ +|++|.+...+| |.++|++.|.+ +|++|+++++|.+++. +.....+ .+++
T Consensus 132 d~~------d~~~l~~~i~~-----~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~~~-~~~~~pl-~~g~ 198 (390)
T PRK08133 132 DLT------DLDAWRAAVRP-----NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCT-PALQQPL-KLGA 198 (390)
T ss_pred CCC------CHHHHHHhcCc-----CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhCC
Confidence 764 46778888865 478888876666 99999987764 6999999999999977 5433223 3578
Q ss_pred cEEEEccccCCCCCCCc--e-EEEEEeCC
Q 035915 306 DFVLCNLDNTQNAQPSK--I-TCLLIRKK 331 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~G--i-G~L~Vr~~ 331 (344)
|++++|++|+ ++++ | + |+++.+++
T Consensus 199 Divv~S~sK~-~~g~-g~~~GG~vv~~~~ 225 (390)
T PRK08133 199 DVVIHSATKY-LDGQ-GRVLGGAVVGSKE 225 (390)
T ss_pred cEEEeeccee-ecCC-cceEeEEEEcCHH
Confidence 9999999999 8845 4 5 45554544
No 71
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.53 E-value=1.8e-13 Score=136.17 Aligned_cols=158 Identities=10% Similarity=0.021 Sum_probs=119.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC-H-HHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE-L-DYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~-~-~~ir~la~~~G~kV~~vp~~~ 232 (344)
-.....++++|++.|+. .+++|+|+++|+..++.++ +++||+++ +...++ . ..+....+..|+++..++.+.
T Consensus 50 Pt~~~lE~~lA~l~g~~----~~~~~~sG~~Ai~~al~al-l~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~ 124 (377)
T TIGR01324 50 LTHFALQDAMCELEGGA----GCYLYPSGLAAVTNSILAF-VKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLI 124 (377)
T ss_pred ccHHHHHHHHHHHhCCC----cEEEECcHHHHHHHHHHHh-cCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCC
Confidence 34567888899999973 4889999999999999888 78999975 554554 2 222333455688887775431
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
.+++++++++ +|++|.+.+.+| |.+.|++.|.+ ||++|+++++|++|+. |... +.-++++|+++
T Consensus 125 ------~e~l~~~i~~-----~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~a~-g~~~-~pl~~gaDivv 191 (377)
T TIGR01324 125 ------GEDIATLIQP-----NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTWAA-GLLF-KPLEHGVDISI 191 (377)
T ss_pred ------HHHHHHhcCC-----CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc-cccc-CccccCceEEE
Confidence 2678887765 478999987776 99999987765 6999999999999999 8762 23357999999
Q ss_pred EccccCCCCCCCc--eEEEEEeCCC
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRKKS 332 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~~~ 332 (344)
.|++|| +|++.+ .|+++.+++.
T Consensus 192 ~S~tK~-l~G~~d~~gG~v~~~~~~ 215 (377)
T TIGR01324 192 QAGTKY-LVGHSDIMIGTVVANART 215 (377)
T ss_pred ecCcee-ccCCCCceEEEEEeCHHH
Confidence 999999 887765 4677766543
No 72
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.53 E-value=1e-13 Score=152.02 Aligned_cols=159 Identities=13% Similarity=-0.033 Sum_probs=123.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCC--CeE-EEcCCcCH--HHHHHHHHcCCcEEEEEeC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRG--NFY-MTIIGEEL--DYVREFASFKESKVILAPE 230 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~G--d~i-vS~~eH~~--~~ir~la~~~G~kV~~vp~ 230 (344)
+.+.+.|..|++++|+++. ++.|+.|+|++.+.++.+++++++ ++| ++..+|+. ..|+.+++..|++|+.+|.
T Consensus 121 eal~~~Qt~la~LtG~~~a--naSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~ 198 (954)
T PRK05367 121 EALLNFQTMVADLTGLEIA--NASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDA 198 (954)
T ss_pred HHHHHHHHHHHHHHCCChh--hccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecC
Confidence 3568999999999999877 699999999999999988888775 675 67888883 4577888889999999987
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-cccccHHHHH-HHHhCCcEEEecccccCcCCccCCCCCCCCcEE
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTRYSMHWIS-EAHRNSWHVLLDATALVVGEDRLNLALHRPDFV 308 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i~Pl~~Ia-~ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFv 308 (344)
+. +. + . .++..+.++.-++ |.+.|++.|. .+|++|++++|||.|.+ .....+..++++||+
T Consensus 199 ~~-d~--~--------~-----~~~~~vlvq~p~~~G~i~d~~~i~~~ah~~Gal~~vda~~~A-l~~l~~pge~GaDi~ 261 (954)
T PRK05367 199 AK-AL--D--------H-----DDVFGVLLQYPGTSGEVRDYTALIAAAHARGALVAVAADLLA-LTLLTPPGEMGADIA 261 (954)
T ss_pred cc-CC--C--------c-----ccEEEEEEecCCCCeeeccHHHHHHHHHHcCCEEEEEehhhh-ccCCCChhhcCCCEE
Confidence 53 11 1 1 1233333333233 9999997775 57999999999998855 445557899999999
Q ss_pred EEccccC----CCCCCCceEEEEEeCCCcc
Q 035915 309 LCNLDNT----QNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 309 v~S~HK~----l~G~P~GiG~L~Vr~~~~~ 334 (344)
++++||| -|||| |+|+|++|++...
T Consensus 262 vgs~qkfg~P~g~GGP-~aGflavr~~~~r 290 (954)
T PRK05367 262 VGSAQRFGVPMGFGGP-HAAYFAVRDAYKR 290 (954)
T ss_pred EeeCcccCCCCCCCCC-CEEEEEECHHHHh
Confidence 9999998 35667 6999999986543
No 73
>PLN02880 tyrosine decarboxylase
Probab=99.52 E-value=3.3e-13 Score=138.75 Aligned_cols=176 Identities=9% Similarity=-0.040 Sum_probs=120.1
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCC-----CeEEEeCCHHHHHHHHH---hhC-----CCCC-CCeE--EEcCCcCHHHH
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDE-----YLVLFTPNYRDAMMLVG---ESY-----PFFR-GNFY--MTIIGEELDYV 214 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~e-----y~VVFTsnaTeAlnlva---~sl-----~~~~-Gd~i--vS~~eH~~~~i 214 (344)
+..++....++-+.+++++|.+.+. -.-+||+|+|+|+.+.+ +.. .+.. ...+ +|..-|. ++
T Consensus 117 sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~--Sv 194 (490)
T PLN02880 117 SPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS--AL 194 (490)
T ss_pred CcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH--HH
Confidence 3445566789999999999997421 14789999999965432 211 1110 1222 3444444 25
Q ss_pred HHHHHcCCc---EEEEEeCCC-CCCccCHHHHHHHhhhcCCCC-CeeEEEEeCcc-c-cccccHHHHHH-HHhCCcEEEe
Q 035915 215 REFASFKES---KVILAPEAW-LDLRIKGSQLSQYFRRKCKHT-PKGLFSYPADI-N-GTRYSMHWISE-AHRNSWHVLL 286 (344)
Q Consensus 215 r~la~~~G~---kV~~vp~~~-~~g~i~~~~L~~~l~~~~~~~-~t~LVa~~avS-N-G~i~Pl~~Ia~-ar~~g~~vlv 286 (344)
...|.-.|+ .|+.+|.+. .+++++.+.|++.+....... .+-+|+.++-+ + |.+-|++.|++ |+++|+++||
T Consensus 195 ~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHV 274 (490)
T PLN02880 195 QKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHV 274 (490)
T ss_pred HHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEE
Confidence 555555676 378889874 246899999999986432111 22344444433 3 99999988875 6999999999
Q ss_pred cccccCcCCccC-----CCCC-CCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 287 DATALVVGEDRL-----NLAL-HRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 287 DAaQa~~G~~~L-----DLs~-l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
|||++. +.... .+.. .++|++++++||| ++.|.|+|+||+|+
T Consensus 275 DaA~gg-~~~~~~~~~~~l~gie~aDSit~d~HKw-l~~P~~~g~llvr~ 322 (490)
T PLN02880 275 DAAYAG-SACICPEYRHYIDGVEEADSFNMNAHKW-FLTNFDCSLLWVKD 322 (490)
T ss_pred ehhhHH-HHHhCHHHHHHhcCchhcCEEEECchhh-cCCCccEEEEEEeC
Confidence 999998 65433 2444 4799999999999 67799999999996
No 74
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.51 E-value=4.3e-13 Score=134.17 Aligned_cols=156 Identities=13% Similarity=-0.018 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC--HHHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE--LDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~--~~~ir~la~~~G~kV~~vp~~~ 232 (344)
...+..++++|++.|+ + .+++|+|+++|+++++.++ +++||++++ ...|. ...+...+...|+++..++.
T Consensus 53 pt~~~Le~~lA~leg~--e--~ivvt~gg~~Ai~~~l~al-l~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-- 125 (388)
T PRK08861 53 PNRGLLEQTLSELESG--K--GAVVTNCGTSALNLWVSAL-LGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQ-- 125 (388)
T ss_pred chHHHHHHHHHHHhCC--C--eEEEECCHHHHHHHHHHHH-cCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECC--
Confidence 3467788889999996 3 6999999999999999888 689999764 33343 22233444556788888753
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
.+.+++++++++ ++++|.+...+| |.++|++.|.+ ++++|+++++|.+++. |.....+ ++++|+++
T Consensus 126 ----~d~e~l~~~i~~-----~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~~~-~~~~~pl-~~GaDivv 194 (388)
T PRK08861 126 ----SDAAALDAALAK-----KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTFLT-PVLQKPL-ELGADFVI 194 (388)
T ss_pred ----CCHHHHHHhcCc-----CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCccc-cccCCCc-ccCCCEEE
Confidence 256778887764 478888887776 99999987764 6899999999999998 6543333 35899999
Q ss_pred EccccCCCCCCCc--eEEEEEeC
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
+|+||| ++||.+ .|+++.++
T Consensus 195 ~S~tK~-l~G~~d~~gG~i~~~~ 216 (388)
T PRK08861 195 HSTTKY-INGHSDVIGGVLITKT 216 (388)
T ss_pred eeccee-ccCCCcceeEEEEecH
Confidence 999999 887865 35555543
No 75
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.51 E-value=7.5e-13 Score=133.67 Aligned_cols=156 Identities=15% Similarity=0.069 Sum_probs=121.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp~~~ 232 (344)
......++++|++.|+. ..+++++++.|+.+++.++ +++|++++ +...|+ ...+...+.+.|+++++++.+
T Consensus 63 p~~~~le~~lA~l~g~~----~al~~~SG~~Ai~~al~al-l~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 136 (427)
T PRK05994 63 PTNAVLEERVAALEGGT----AALAVASGHAAQFLVFHTL-LQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADAD- 136 (427)
T ss_pred ccHHHHHHHHHHHhCCC----cEEEEcCHHHHHHHHHHHH-hCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCC-
Confidence 34567788999999985 2678899999999988887 67899965 455565 234555566789999888753
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
+.+++++.+++ ++++|.+.+.+| |.++|++.|.+ +|++|+++++|.+|+. |.....+ ++++|+++
T Consensus 137 -----d~~~l~~ai~~-----~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a~-~~~~~pl-~~gaDivv 204 (427)
T PRK05994 137 -----DPASFERAITP-----RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLAS-PYLIRPI-EHGADIVV 204 (427)
T ss_pred -----CHHHHHHhcCc-----CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCccc-cccCCcc-ccCCcEEE
Confidence 46778888865 478888887777 99999987765 6999999999999998 7654334 47999999
Q ss_pred EccccCCCCCCCc-eEEEEEeC
Q 035915 310 CNLDNTQNAQPSK-ITCLLIRK 330 (344)
Q Consensus 310 ~S~HK~l~G~P~G-iG~L~Vr~ 330 (344)
.|+||+ +|+|.| +|.+++..
T Consensus 205 ~S~tK~-lgg~~~~~gG~v~~~ 225 (427)
T PRK05994 205 HSLTKF-LGGHGNSMGGIIVDG 225 (427)
T ss_pred EcCccc-cCCCCCcEEEEEEeC
Confidence 999999 887754 78887753
No 76
>PRK07179 hypothetical protein; Provisional
Probab=99.51 E-value=6.4e-13 Score=131.88 Aligned_cols=155 Identities=14% Similarity=0.100 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeE-EEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFY-MTIIGEELDYVREFASFKESKVILAPEAWLDL 235 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~i-vS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g 235 (344)
...+.++++|+++|++ .++||+|+|+|+++++.++. .+|+.+ +...+|... + ..++..|+++...+.
T Consensus 100 ~~~~le~~la~~~g~~----~~~~~~sG~~An~~~l~~l~-~~g~~v~~~~~~h~s~-~-~~~~~~g~~~~~~~~----- 167 (407)
T PRK07179 100 PKPQFEKKLAAFTGFE----SCLLCQSGWAANVGLLQTIA-DPNTPVYIDFFAHMSL-W-EGVRAAGAQAHPFRH----- 167 (407)
T ss_pred HHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHhC-CCCCEEEEECCcCHHH-H-HHHHHCCCeEEEecC-----
Confidence 3455567999999984 37899999999999998874 468875 466666532 2 223345776654332
Q ss_pred ccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCcc---------CCCCCC
Q 035915 236 RIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDR---------LNLALH 303 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~---------LDLs~l 303 (344)
.+.++|++.+++. .+++|.+..++| |.++|+++|.+ ++++|+++++|.+|+. |... +++. .
T Consensus 168 -~d~~~l~~~l~~~----~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~-g~~g~~g~g~~~~~~~~-~ 240 (407)
T PRK07179 168 -NDVDHLRRQIERH----GPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSL-GTHGPQGAGLVAELGLT-S 240 (407)
T ss_pred -CCHHHHHHHHHhc----CCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccc-cCcCCCCCchHHhcCCC-C
Confidence 3678898888642 367888887775 99999987765 6899999999999998 7532 2332 2
Q ss_pred CCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 304 RPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
++|++++|+||+ +| + ++|+++++++..
T Consensus 241 ~vdi~~~S~sK~-~g-~-~~G~l~~~~~~~ 267 (407)
T PRK07179 241 RVHFITASLAKA-FA-G-RAGIITCPRELA 267 (407)
T ss_pred CCCEEEeechHh-hh-c-cCeEEEeCHHHH
Confidence 579999999999 88 5 489999887653
No 77
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.50 E-value=3.1e-13 Score=130.33 Aligned_cols=163 Identities=15% Similarity=0.096 Sum_probs=118.9
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEeCCCCCCcc
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREFASFKESKVILAPEAWLDLRI 237 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i 237 (344)
++.|+.+|+++|++++ +|+||+|+|+++++++.++ ..+|+.++.. ..+. .+...++..|+++..+|.+. ++.+
T Consensus 57 ~~lr~~ia~~~~~~~~--~i~~~~G~~~~l~~~~~~l-~~~gd~v~~~~p~y~--~~~~~~~~~g~~~~~~~~~~-~~~~ 130 (346)
T TIGR01141 57 AELKQALADYYGVDPE--QILLGNGSDEIIELLIRAF-LEPGDAVLVPPPTYS--MYEISAKIHGAEVVKVPLDE-DGQL 130 (346)
T ss_pred HHHHHHHHHHhCcChH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCCHH--HHHHHHHHcCCeEEEeccCC-CCCC
Confidence 6799999999998776 7999999999999988887 4678886543 3322 23344566799999999875 3678
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhC--CcEEEecccccCcCCc--cCCC-CCCCCcEEE
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRN--SWHVLLDATALVVGED--RLNL-ALHRPDFVL 309 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~--g~~vlvDAaQa~~G~~--~LDL-s~l~~DFvv 309 (344)
+.+++++.+++ +++++.++..+| |..+|++.+.+ ++.. ++++++|.++.-.... .+++ .....++++
T Consensus 131 d~~~l~~~~~~-----~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~ 205 (346)
T TIGR01141 131 DLEDILVAIDD-----KPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVL 205 (346)
T ss_pred CHHHHHHhcCC-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEE
Confidence 99999887653 467888876666 99999977755 4544 9999999998731211 1222 122335778
Q ss_pred EccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.|++|| ||.| | +|++++++++.+
T Consensus 206 ~S~sK~-~g~~-G~r~G~~~~~~~~~~ 230 (346)
T TIGR01141 206 RTLSKA-FGLA-GLRIGYAIANAEIID 230 (346)
T ss_pred ehhhHh-hhch-hhhceeeecCHHHHH
Confidence 899999 8744 5 799998876544
No 78
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.50 E-value=3.9e-13 Score=147.48 Aligned_cols=164 Identities=17% Similarity=0.103 Sum_probs=121.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHH-----HHHHHHHhhCCCCCCC----e-EEEcCCcCHHHHHHHHHcCCcEE
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYR-----DAMMLVGESYPFFRGN----F-YMTIIGEELDYVREFASFKESKV 225 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaT-----eAlnlva~sl~~~~Gd----~-ivS~~eH~~~~ir~la~~~G~kV 225 (344)
+.+.+..+.+++++|.+ .+.|++|+| .++ ++++.+.+++|+ . +++...|..+. ..+...|++|
T Consensus 542 ~~i~e~q~~l~eltG~d----~~sl~~~~ga~ge~agL-~a~r~~~~~~G~~~r~~vlis~~aH~snp--~sa~~~G~~v 614 (954)
T PRK05367 542 ELIDQLEAWLAEITGYD----AVSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRDVCLIPSSAHGTNP--ASAVMAGMKV 614 (954)
T ss_pred HHHHHHHHHHHHHHCCC----CEEECccHHHHHHHHHH-HHHHHHhhccCCCCCCEEEEEchhhhhhH--HHHHHCCCEE
Confidence 45688999999999985 488988887 334 567777666665 2 46777777542 1245569999
Q ss_pred EEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCc--cc-ccc-ccHHHHHH-HHhCCcEEEecccccCcCCccCCC
Q 035915 226 ILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPAD--IN-GTR-YSMHWISE-AHRNSWHVLLDATALVVGEDRLNL 300 (344)
Q Consensus 226 ~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~av--SN-G~i-~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDL 300 (344)
+++|.+. +|.+|.++|++.++++ ++++++++.+ ++ |.. .|++.|.+ +|++|++++||+||.. ++..+.-
T Consensus 615 v~v~~d~-~G~iD~~~L~~~i~~~----~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~-al~~l~~ 688 (954)
T PRK05367 615 VVVACDE-NGNIDLDDLRAKAEEH----ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMN-AQVGLAR 688 (954)
T ss_pred EEECCCC-CCCcCHHHHHHHHhcc----CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChh-hccCCCC
Confidence 9999875 5899999999998752 2344444433 33 664 79987765 6999999999999997 7665553
Q ss_pred -CCCCCcEEEEccccCCCCCCC-----ceEEEEEeCCCc
Q 035915 301 -ALHRPDFVLCNLDNTQNAQPS-----KITCLLIRKKSF 333 (344)
Q Consensus 301 -s~l~~DFvv~S~HK~l~G~P~-----GiG~L~Vr~~~~ 333 (344)
.++++|++++|+||| ||.|. |+|+|+||+...
T Consensus 689 pg~~GADi~~~s~HK~-f~~P~G~GGPg~G~l~vr~~l~ 726 (954)
T PRK05367 689 PGDIGADVSHLNLHKT-FCIPHGGGGPGVGPIGVKAHLA 726 (954)
T ss_pred hhhcCCCEEEecCccc-CCCCcCCCCCceEEEeeccccc
Confidence 368999999999999 75444 577999986543
No 79
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.49 E-value=8.3e-13 Score=135.37 Aligned_cols=173 Identities=11% Similarity=-0.058 Sum_probs=118.6
Q ss_pred hhhhhhHHH-HHHHHHHHHHcCCCCCCCeEEE---eCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC---HHHH-HHHHH-
Q 035915 150 PGSFISIPE-IQARNKVLKHCGLPDDEYLVLF---TPNYRDAMMLVGESYPFFRGNFYMT-IIGEE---LDYV-REFAS- 219 (344)
Q Consensus 150 ~g~~as~~l-e~AR~~IA~~Lga~p~ey~VVF---TsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~---~~~i-r~la~- 219 (344)
.|...-+.+ +-|+++.+++||+..+ .+.| ..+++.|+..+..++ +++||.|++ ...+. .... ..-.+
T Consensus 73 ~G~~~~d~lE~~~~~~~~~~f~~~~~--~~~~nv~~~SG~~AN~av~~aL-~~pgD~Il~~d~~~gGhl~H~~~~~g~~~ 149 (475)
T PLN03226 73 GGNEYIDQIETLCQKRALEAFRLDPE--KWGVNVQPLSGSPANFAVYTAL-LQPHDRIMGLDLPHGGHLSHGYQTDGKKI 149 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHhCCCcc--eeEEecCcCchHHHHHHHHHHh-CCCCCEEEECCCCcCcchhhhhhhccccc
Confidence 344443444 5689999999999765 3545 356777877788777 579999876 43322 2111 11111
Q ss_pred -cCCcEEEEEe--CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-cccccHHHHHH-HHhCCcEEEecccccCcC
Q 035915 220 -FKESKVILAP--EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTRYSMHWISE-AHRNSWHVLLDATALVVG 294 (344)
Q Consensus 220 -~~G~kV~~vp--~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G 294 (344)
..+..+..++ .+..++.+|.++|++.+... +++++++. .++ |...|++.|.+ ++++|++++||++|.+ |
T Consensus 150 s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~----~pklIv~~-~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~-G 223 (475)
T PLN03226 150 SATSIYFESMPYRLDESTGLIDYDKLEKKAMLF----RPKLIIAG-ASAYPRDWDYARMRKIADKVGALLMCDMAHIS-G 223 (475)
T ss_pred ccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc----CCeEEEEe-cCcCCCccCHHHHHHHHHHcCCEEEEEchhhh-C
Confidence 1122222233 34446889999999988642 35566554 344 99999988865 6999999999999999 9
Q ss_pred CccCCCCC---CCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 295 EDRLNLAL---HRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 295 ~~~LDLs~---l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
....++.. ..+||+++++||| ++||.| |+++++++..
T Consensus 224 li~~~~~~~p~~~~Div~~t~hK~-L~GP~G-g~I~~~~~~~ 263 (475)
T PLN03226 224 LVAAQEAASPFEYCDVVTTTTHKS-LRGPRG-GMIFFRKGPK 263 (475)
T ss_pred cccCCCCCCCCCCCeEEEecCccc-ccCCCc-eEEEEchhhc
Confidence 98877543 2799999999999 756999 8888887543
No 80
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.49 E-value=9.8e-13 Score=131.77 Aligned_cols=163 Identities=10% Similarity=-0.046 Sum_probs=119.8
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC-H-HHHHHHHHcCCcEEEE
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE-L-DYVREFASFKESKVIL 227 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~-~-~~ir~la~~~G~kV~~ 227 (344)
++......++.++++++++|++. .+.++|++.|+.+++.++ +++||+|+. ...|. . ......++..|++++.
T Consensus 60 ~r~~~p~~~~le~~lA~l~g~~~----~i~~~sG~~Al~~~l~~l-l~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~ 134 (403)
T PRK07503 60 SRISNPTLALLEQRMASLEGGEA----AVALASGMGAITATLWTL-LRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRH 134 (403)
T ss_pred eCCCCchHHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHHHH-cCCCCEEEEccCccchHHHHHHHHHhhCCEEEEE
Confidence 33344457889999999999852 455667788999988877 789999654 33343 2 2233445667999988
Q ss_pred EeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCC
Q 035915 228 APEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHR 304 (344)
Q Consensus 228 vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~ 304 (344)
++.+ +.++|++++++ ++++|.+...+| |.+.|++.|.+ ++++|+++++|.+++. +.....+ .++
T Consensus 135 vd~~------d~~~l~~~i~~-----~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~a~-~~~~~~l-~~g 201 (403)
T PRK07503 135 VDLT------DPAALKAAISD-----KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTYCT-PYLQRPL-ELG 201 (403)
T ss_pred eCCC------CHHHHHHhcCc-----cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhC
Confidence 8763 46778888865 477888876666 99999987765 6999999999999997 6543334 368
Q ss_pred CcEEEEccccCCCCCCCc--eEEEEEeCCC
Q 035915 305 PDFVLCNLDNTQNAQPSK--ITCLLIRKKS 332 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~ 332 (344)
+|++++|++|+ +|+|.+ .|+++.+++.
T Consensus 202 ~Di~v~S~tK~-l~g~gd~~gG~v~~~~~l 230 (403)
T PRK07503 202 ADLVVHSATKY-LGGHGDITAGLVVGGKAL 230 (403)
T ss_pred CCEEEcccccc-ccCCCceeEEEEEcCHHH
Confidence 99999999999 886643 6777765544
No 81
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.48 E-value=9.1e-13 Score=132.21 Aligned_cols=155 Identities=12% Similarity=0.005 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC-H-HHHHHHHHcCCcEEEEEeCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE-L-DYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~-~-~~ir~la~~~G~kV~~vp~~~~ 233 (344)
.....|++||++.|+. ++++|+|+++|++.++.++ +++||+++ +.-.|. . ..+....++.|+++..++.+
T Consensus 62 t~~~Le~~iA~le~~~----~~~~~~sG~~Ai~~~l~al-l~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~-- 134 (394)
T PRK09028 62 THFAFQAAIVELEGGA----GTALYPSGAAAISNALLSF-LKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPM-- 134 (394)
T ss_pred hHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCC--
Confidence 4567889999998873 4899999999999998887 78999965 444554 2 22233345678988877543
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEEE
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLC 310 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~ 310 (344)
+.+++++++++ +|++|.+...+| |.+.|++.|.+ +|++|++++||.+|+. |.. ++--++++|+++.
T Consensus 135 ----~~e~l~~~l~~-----~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~a~-p~~-~~Pl~~GaDivv~ 203 (394)
T PRK09028 135 ----IGEGIRELIRP-----NTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWAS-PIN-SRPFEMGVDISIQ 203 (394)
T ss_pred ----CHHHHHHhcCc-----CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCccc-ccc-CCccccCceEEEE
Confidence 24568887765 478999998887 99999987754 6999999999999998 732 2222478999999
Q ss_pred ccccCCCCCCCc--eEEEEEeC
Q 035915 311 NLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 311 S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
|+||| ++|+.+ .|+++.++
T Consensus 204 S~tK~-l~Gh~d~~~G~~~~~~ 224 (394)
T PRK09028 204 AATKY-IVGHSDVMLGTATANE 224 (394)
T ss_pred eCCeE-ecCCCCEEEEEEECCH
Confidence 99999 877843 34444343
No 82
>PRK05939 hypothetical protein; Provisional
Probab=99.48 E-value=3.6e-12 Score=127.75 Aligned_cols=159 Identities=11% Similarity=-0.012 Sum_probs=119.9
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC-H-HHHHHHHHcCCcEEEE
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE-L-DYVREFASFKESKVIL 227 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~-~-~~ir~la~~~G~kV~~ 227 (344)
++.-....++..++++++.|+.. .|+|++| +.|+..++.++ +++||+|+ +...|. . ..+.. +++.|++++.
T Consensus 42 ~r~g~p~~~~lE~~la~leg~~~---~v~~ssG-~~Ai~~~l~al-l~~Gd~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~ 115 (397)
T PRK05939 42 ARQGTPTTAALEAKITKMEGGVG---TVCFATG-MAAIAAVFLTL-LRAGDHLVSSQFLFGNTNSLFGT-LRGLGVEVTM 115 (397)
T ss_pred CCCCCHHHHHHHHHHHHHhCCCe---EEEeCCH-HHHHHHHHHHH-cCCCCEEEECCCccccHHHHHHH-HHhcCCEEEE
Confidence 34444567788899999999852 5777765 78999988877 78999865 455554 2 23443 4567999998
Q ss_pred EeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCC
Q 035915 228 APEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHR 304 (344)
Q Consensus 228 vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~ 304 (344)
++.. +.++|++++++ +|++|.+.+.+| |.+.|++.|.+ ||++|+++++|++|+. |. .++...++
T Consensus 116 v~~~------d~e~l~~~l~~-----~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~a~-~~-~~~~~~~g 182 (397)
T PRK05939 116 VDAT------DVQNVAAAIRP-----NTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTMTS-PW-LFRPKDVG 182 (397)
T ss_pred ECCC------CHHHHHHhCCC-----CCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCccc-cc-ccCccccC
Confidence 8753 56788888865 478998887777 99999987765 7999999999999988 63 45655678
Q ss_pred CcEEEEccccCCCCCCCc-eEEEEEe
Q 035915 305 PDFVLCNLDNTQNAQPSK-ITCLLIR 329 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~G-iG~L~Vr 329 (344)
+|+++.|++|+ |+++.+ +|..++.
T Consensus 183 aDivv~S~sK~-~~g~g~~igg~v~~ 207 (397)
T PRK05939 183 ASLVINSLSKY-IAGHGNALGGAVTD 207 (397)
T ss_pred CEEEEecCeec-ccCCCCeEEEEEec
Confidence 99999999999 886632 4555554
No 83
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.47 E-value=3.3e-13 Score=128.85 Aligned_cols=169 Identities=18% Similarity=0.155 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHH-HHHHHcCCcEEEEEeCCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYV-REFASFKESKVILAPEAWL 233 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~i-r~la~~~G~kV~~vp~~~~ 233 (344)
...++.|+.+++++| ++ +++||+|+|+|+.+++.++ +.+|+.++ +...|..... ...+...|++++.+|.+.
T Consensus 32 ~~~~~l~~~~a~~~g--~~--~~~~~~~gt~a~~~~~~~l-~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~- 105 (338)
T cd06502 32 PTTAKLEARAAELFG--KE--AALFVPSGTAANQLALAAH-TQPGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN- 105 (338)
T ss_pred HHHHHHHHHHHHHhC--CC--eEEEecCchHHHHHHHHHh-cCCCCeEEEecCcceeeecCCcHHHHcCceEEeecCCC-
Confidence 356788999999999 33 5999999999999988887 57888865 5555542111 112333699999998764
Q ss_pred CCccCHHHHHHHhhhcCC--CCCeeEEEEeCccc-cccccHH---HHH-HHHhCCcEEEecccccC-----cCCccCCCC
Q 035915 234 DLRIKGSQLSQYFRRKCK--HTPKGLFSYPADIN-GTRYSMH---WIS-EAHRNSWHVLLDATALV-----VGEDRLNLA 301 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~--~~~t~LVa~~avSN-G~i~Pl~---~Ia-~ar~~g~~vlvDAaQa~-----~G~~~LDLs 301 (344)
+.++.++|++++++..+ ..+++++.+...+| |.+++.+ +|. .++++|+++++|+++.. .|. .++.-
T Consensus 106 -~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~-~~~~~ 183 (338)
T cd06502 106 -GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGV-ALKTY 183 (338)
T ss_pred -CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC-CHHHH
Confidence 56899999998864100 12478888887777 7665664 343 35889999999998742 032 22211
Q ss_pred CCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 302 LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 302 ~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
..++|++++|+||| ||.| |.++++.+++..+
T Consensus 184 ~~~~d~~~~s~sK~-~~~~-~g~~~~~~~~~~~ 214 (338)
T cd06502 184 KSGVDSVSFCLSKG-GGAP-VGAVVVGNRDFIA 214 (338)
T ss_pred HhcCCEEEEecccc-CCCc-cceEEECCHHHHH
Confidence 24789999999999 9877 4334555655443
No 84
>PLN02263 serine decarboxylase
Probab=99.47 E-value=3.2e-12 Score=130.82 Aligned_cols=172 Identities=9% Similarity=-0.010 Sum_probs=123.7
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC-C-CCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY-P-FFRGNFYMTIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl-~-~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
+++...+.-+.+++++|.+++++.=+||+|+|||+-+..... . +..+-.|.+..-|.+ +...++-.|++++.+|.+
T Consensus 131 s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~S--v~KAa~llgi~~~~Vp~d 208 (470)
T PLN02263 131 SRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYS--VFKAARMYRMECVKVDTL 208 (470)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHH--HHHHHHhcCCcceEeccC
Confidence 455668889999999999865555699999999977643322 1 122322445544543 445556679999999997
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCc-----EEEecccccCcCCc-------
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSW-----HVLLDATALVVGED------- 296 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~-----~vlvDAaQa~~G~~------- 296 (344)
. +++++.++|++.+.++. .++-+|+.++-++ |.+=||+.|+. ++++|+ ++|||||-.- ...
T Consensus 209 ~-~g~mD~~aL~~aI~~d~--~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG-~~lPf~~~~~ 284 (470)
T PLN02263 209 V-SGEIDCADFKAKLLANK--DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFG-LMMPFVKRAP 284 (470)
T ss_pred C-CCcCcHHHHHHHHHhCC--CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchh-hHhhhccccc
Confidence 5 68999999999987532 1244555555443 99999998876 578886 9999998642 222
Q ss_pred cCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 297 RLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 297 ~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
++|+.. ++|-+++++||| ++.|.++|++++|+...
T Consensus 285 ~~df~~-~vDSIsvD~HK~-l~~P~~cgvll~R~~~~ 319 (470)
T PLN02263 285 KVTFKK-PIGSVSVSGHKF-VGCPMPCGVQITRMEHI 319 (470)
T ss_pred ccCCCc-CccEEEECCccc-cCCCcCEEEEEEehhhH
Confidence 256554 499999999999 77799999999997644
No 85
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.47 E-value=2e-12 Score=129.97 Aligned_cols=160 Identities=10% Similarity=-0.022 Sum_probs=121.2
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEE
Q 035915 152 SFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILA 228 (344)
Q Consensus 152 ~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~v 228 (344)
+......++.++++|+++|+. ..+||+++++|+..++.++ +++|++++ +...|+ ...+...++..|++++.+
T Consensus 53 r~~~p~~~~le~~lA~l~g~~----~~v~~~sG~~Ai~~al~~l-~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v 127 (418)
T TIGR01326 53 RLMNPTTDVLEQRIAALEGGV----AALAVASGQAAITYAILNL-AQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFV 127 (418)
T ss_pred CCCChhHHHHHHHHHHHhCCC----eEEEEccHHHHHHHHHHHH-hCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEE
Confidence 333345678999999999973 4799999999999888766 56899865 454454 234455566789999888
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRP 305 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~ 305 (344)
+.+ +.+++++.+++ ++++|.+...+| |.++|++.|.+ ++++|+++++|.+++. |.....+ .+++
T Consensus 128 ~~~------d~~~l~~~l~~-----~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~~-~~~~~~l-~~g~ 194 (418)
T TIGR01326 128 DPD------DPEEFEKAIDE-----NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFAT-PYLCRPI-DHGA 194 (418)
T ss_pred CCC------CHHHHHHhcCc-----CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCch-hhcCCch-hcCC
Confidence 753 56788888865 367777776666 99999988865 6999999999999998 7433233 4689
Q ss_pred cEEEEccccCCCCCCCc--eEEEEEeCC
Q 035915 306 DFVLCNLDNTQNAQPSK--ITCLLIRKK 331 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~G--iG~L~Vr~~ 331 (344)
|+++.|++|+ +|++ | +|.++++++
T Consensus 195 Divv~S~sK~-l~g~-G~~lGg~v~~~~ 220 (418)
T TIGR01326 195 DIVVHSATKY-IGGH-GTAIGGVIVDGG 220 (418)
T ss_pred eEEEECcccc-ccCC-ccceEEEEEecc
Confidence 9999999999 8855 4 888888653
No 86
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.46 E-value=4.3e-12 Score=126.09 Aligned_cols=159 Identities=13% Similarity=0.049 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLDL 235 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~g 235 (344)
..++..+.+++++|++ .+++|+|+|+|+++++.++.+++||+|+ +...|... ...+...|++++.++++..+.
T Consensus 32 ~~~~~e~~la~~~g~~----~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~--~~~~~~~G~~~v~vd~d~~~~ 105 (376)
T TIGR02379 32 FSRRCETWLENRTGTK----KALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVST--ANAFVLRGAKIVFVDIRPDTM 105 (376)
T ss_pred HHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHH--HHHHHHcCCEEEEEecCCCcC
Confidence 3456667788888873 5999999999999999888788999964 56665522 122234699999999986556
Q ss_pred ccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHH-HHHhCCcEEEecccccCcCCccCCCCCCC--CcEEEEcc
Q 035915 236 RIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWIS-EAHRNSWHVLLDATALVVGEDRLNLALHR--PDFVLCNL 312 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia-~ar~~g~~vlvDAaQa~~G~~~LDLs~l~--~DFvv~S~ 312 (344)
.++.+++++.+++ ++++|...+ .+|...|++.|. .|+++|+.++.|++|+. |.. .+-...+ .|+-+||+
T Consensus 106 ~~d~~~le~~i~~-----~tk~Iip~~-~~G~~~d~~~I~~la~~~~i~vIeDaa~~~-g~~-~~~~~~g~~~~~~~fSf 177 (376)
T TIGR02379 106 NIDETLIESAITH-----RTKAIVPVH-YAGVACDMDTIMALANKHQLFVIEDAAQGV-MST-YKGRALGSIGHLGTFSF 177 (376)
T ss_pred CCCHHHHHHhcCc-----CceEEEEeC-CCCCccCHHHHHHHHHHCCCEEEEECcccc-CCc-cCCcccCCCCCEEEEeC
Confidence 7899999988865 467775432 269999997775 46999999999999999 864 3433333 39999999
Q ss_pred ccC--CCCCCCceEEEEEeC
Q 035915 313 DNT--QNAQPSKITCLLIRK 330 (344)
Q Consensus 313 HK~--l~G~P~GiG~L~Vr~ 330 (344)
|+. +..++. .|+++.++
T Consensus 178 ~~~K~l~~g~~-gG~v~~~~ 196 (376)
T TIGR02379 178 HETKNYTSGGE-GGALLIND 196 (376)
T ss_pred CCCCcCcccCC-ceEEEECC
Confidence 873 232343 46666653
No 87
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.45 E-value=2.2e-12 Score=121.92 Aligned_cols=163 Identities=13% Similarity=-0.012 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHcCCC----CCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 157 PEIQARNKVLKHCGLP----DDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~----p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+.+.|+.++++++.. ....+++||+|+|++++.+..++. .+|+.++ ....|.. +...++..|.+++.+|.+
T Consensus 37 ~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~-~~g~~vl~~~~~~~~--~~~~~~~~~~~~~~i~~~ 113 (350)
T cd00609 37 GLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL-NPGDEVLVPDPTYPG--YEAAARLAGAEVVPVPLD 113 (350)
T ss_pred CcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhC-CCCCEEEEcCCCchh--HHHHHHHCCCEEEEEecc
Confidence 4455777777777754 112279999999999999999884 5688865 4444442 233455578999999987
Q ss_pred CCCCccCH--HHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcCCc---c---
Q 035915 232 WLDLRIKG--SQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVGED---R--- 297 (344)
Q Consensus 232 ~~~g~i~~--~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~~---~--- 297 (344)
+. +..+. +.+.....+ ++++|.+++.+| |..+|++.+. .++++|+++++|++++. +.. .
T Consensus 114 ~~-~~~~~~~~~~~~~~~~-----~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~-~~~~~~~~~~ 186 (350)
T cd00609 114 EE-GGFLLDLELLEAAKTP-----KTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAE-LVYDGEPPPA 186 (350)
T ss_pred cc-cCCccCHHHHHhhcCc-----cceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhh-ceeCCccccc
Confidence 64 33333 444444332 477888887665 9999987664 46899999999999986 432 1
Q ss_pred -CCCCCCCCcEEEEccccCCCC-CCCceEEEEEeC
Q 035915 298 -LNLALHRPDFVLCNLDNTQNA-QPSKITCLLIRK 330 (344)
Q Consensus 298 -LDLs~l~~DFvv~S~HK~l~G-~P~GiG~L~Vr~ 330 (344)
......+.|+++.|+||+ ++ ++.++|++++++
T Consensus 187 ~~~~~~~~~~~~~~s~~K~-~~~~g~~~G~i~~~~ 220 (350)
T cd00609 187 LALLDAYERVIVLRSFSKT-FGLPGLRIGYLIAPP 220 (350)
T ss_pred ccCcCccCcEEEEeecccc-cCCcccceEEEecCH
Confidence 234456789999999999 76 344689999887
No 88
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.45 E-value=1.7e-12 Score=129.33 Aligned_cols=157 Identities=11% Similarity=-0.055 Sum_probs=117.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCH--HHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEEL--DYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~--~~ir~la~~~G~kV~~vp~~~ 232 (344)
....+.|+++|++.|++. .++|+ |+++|+.+++.++ +.+||+++. ...|.. ..+..+++..|+++..++.
T Consensus 61 p~~~~Le~~lA~~~g~~~---~i~~~-sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~-- 133 (388)
T PRK07811 61 PTRTALEEQLAALEGGAY---GRAFS-SGMAATDCLLRAV-LRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDL-- 133 (388)
T ss_pred ccHHHHHHHHHHHhCCCc---eEEeC-CHHHHHHHHHHHH-hCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCC--
Confidence 456789999999999863 46665 5589999999888 689999654 444542 2233334456888877664
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
.+.++|++++++ ++++|.+...+| |.+.|++.|.+ ++++|+++++|.+++. +.....+ .+++|+++
T Consensus 134 ----~d~e~l~~~i~~-----~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~a~-~~~~~p~-~~gaDivv 202 (388)
T PRK07811 134 ----SDLDAVRAAITP-----RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTFAS-PYLQQPL-ALGADVVV 202 (388)
T ss_pred ----CCHHHHHHhcCc-----CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCCCc-cccCCch-hhCCcEEE
Confidence 256788888865 478888876666 99999988765 6999999999999998 7543333 36899999
Q ss_pred EccccCCCCCCCc--eEEEEEeCC
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRKK 331 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~~ 331 (344)
+|++|+ +++|.+ .|+++++++
T Consensus 203 ~S~sK~-l~g~~~~~gG~vv~~~~ 225 (388)
T PRK07811 203 HSTTKY-IGGHSDVVGGALVTNDE 225 (388)
T ss_pred ecCcee-ecCCCCcEEEEEEECCH
Confidence 999999 887855 577777643
No 89
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.45 E-value=1.1e-12 Score=130.88 Aligned_cols=182 Identities=13% Similarity=0.024 Sum_probs=133.8
Q ss_pred hHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHH
Q 035915 135 EPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLF-TPNYRDAMMLVGESYPFFRGNFYMTIIGEELDY 213 (344)
Q Consensus 135 ~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVF-TsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ 213 (344)
.++++.+.+.+.++. +....+.+.++++.+.++|+.+ ++|+|+| ++++|.++..+..++--++|+.++.. +.=..-
T Consensus 19 ~~~~~~~~~~~~~HR-s~~F~~i~~e~~~~L~~l~~~~-~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~-g~FG~r 95 (374)
T TIGR01365 19 SIEELKNAPLGRSHR-SKLGKEKLAEAIKKTREMLGVP-ADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAW-ESFGKG 95 (374)
T ss_pred hHHHHhhhhcccCcC-CHHHHHHHHHHHHHHHHHhCCC-CCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEE-CHHHHH
Confidence 355665555555433 3455667899999999999974 4566655 89999999998888732467765432 211333
Q ss_pred HH-HHHHcCCc-EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc--ccccccHHHHHHHHhCCcEEEeccc
Q 035915 214 VR-EFASFKES-KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI--NGTRYSMHWISEAHRNSWHVLLDAT 289 (344)
Q Consensus 214 ir-~la~~~G~-kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS--NG~i~Pl~~Ia~ar~~g~~vlvDAa 289 (344)
|. +.|++.|+ ++..+...| +..++.++++. . .. |++.|.- +|+++|++.+.... ++++++|||+
T Consensus 96 ~~~eia~~~g~~~v~~l~~~~-g~~~~~~~ve~--~-------~~-v~~vhnETSTGv~npv~~i~~~~-~~~lliVDav 163 (374)
T TIGR01365 96 WVTDVTKQLKLPDVRVLEAEY-GKLPDLKKVDF--K-------ND-VVFTWNGTTSGVRVPNGDFIPAD-REGLTICDAT 163 (374)
T ss_pred HHHHHHHhcCCCCcEEEcCCC-CCCCCHHHcCC--C-------CC-EEEecCCCchheecccccccccc-CCCcEEEEcc
Confidence 44 77888899 588887777 34678877752 1 12 4566654 49999997654322 4899999999
Q ss_pred ccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 290 ALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 290 Qa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
.++ |..++|++. +|+++.+.+|. +|.|.|++++++++++.+.
T Consensus 164 Ss~-g~~~l~~d~--iDv~~tgsQK~-L~~ppGls~v~vs~~Al~~ 205 (374)
T TIGR01365 164 SAA-FAQDLDYHK--LDVVTFSWQKV-LGGEGAHGMLILSPRAVAR 205 (374)
T ss_pred chh-cCCCCChhH--CcEEEEechhc-cCCCCceEEEEECHHHHHH
Confidence 999 999999994 99999999999 8889999999999988765
No 90
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.45 E-value=2.6e-12 Score=128.56 Aligned_cols=159 Identities=9% Similarity=-0.038 Sum_probs=115.3
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC--HHHHHHHHHcCCcEEEEEeCC
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE--LDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~--~~~ir~la~~~G~kV~~vp~~ 231 (344)
....++.++++|+++|+++. ++ +++++.|+..+..++ +++||+++. ...+. ...++.++...|++++.++.
T Consensus 64 ~p~~~~Le~~lA~l~G~~~~---~~-~~sG~~Ai~~~l~~~-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~- 137 (398)
T PRK07504 64 NPTVDMFEKRMCALEGAEDA---RA-TASGMAAVTAAILCQ-VKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDG- 137 (398)
T ss_pred CchHHHHHHHHHHHhCCCee---eE-ecCHHHHHHHHHHHH-hCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECC-
Confidence 34568899999999999643 44 667788887655543 578999754 44444 22344555667999888752
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEE
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFV 308 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFv 308 (344)
++.+++++++++ +|++|.+...+| |.+.|++.|.+ ++++|+++++|++|+. +...-.+ ++++|++
T Consensus 138 -----~d~e~l~~ai~~-----~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~-~~~~~~~-~~gaDiv 205 (398)
T PRK07504 138 -----LDLDNWEKAVRP-----NTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFAT-PLFQKPL-ELGAHIV 205 (398)
T ss_pred -----CCHHHHHHhcCc-----CceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccc-cccCCch-hhCCCEE
Confidence 467888888865 478999887777 99999988865 6899999999999987 6543222 4689999
Q ss_pred EEccccCCCCCCC-ceEEEEE-eCCC
Q 035915 309 LCNLDNTQNAQPS-KITCLLI-RKKS 332 (344)
Q Consensus 309 v~S~HK~l~G~P~-GiG~L~V-r~~~ 332 (344)
++|+||+ |++|. .+|.+++ +++.
T Consensus 206 v~S~sK~-l~g~g~~~GG~vv~~~~~ 230 (398)
T PRK07504 206 VYSATKH-IDGQGRCLGGVVLSDKAW 230 (398)
T ss_pred Eeecccc-ccCCccceEEEEEeCcHH
Confidence 9999999 87663 3654444 4443
No 91
>PLN02452 phosphoserine transaminase
Probab=99.45 E-value=3.8e-13 Score=133.66 Aligned_cols=166 Identities=13% Similarity=0.043 Sum_probs=117.3
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEe-CCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEE
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFT-PNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILA 228 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFT-snaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~v 228 (344)
+......++++|+.+.+++++ |++|+|+|. .|+|.++..+..++- .+|+.+. ...+.=..-+...|++.|...+..
T Consensus 47 s~~f~~i~~~~~~~L~~l~~~-p~~y~v~~l~Gsgt~~~ea~~~nl~-~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~ 124 (365)
T PLN02452 47 GKEFLSIIQKAEADLRELLDI-PDNYEVLFLQGGASTQFAAIPLNLC-KPGDKADFVVTGSWSKKAAKEAKKYCKTNVIA 124 (365)
T ss_pred chHHHHHHHHHHHHHHHHhCC-CCCceEEEEeCccHHHHHHHHHhcC-CCCCeEEEEECCHHHHHHHHHHHHhCCCcEEE
Confidence 344456789999999999998 467888888 799999999988873 4666632 233311333444566667544333
Q ss_pred eCCCC--CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccc-ccHHHHHHHHhCCcEEEecccccCcCCccCCCCCC
Q 035915 229 PEAWL--DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTR-YSMHWISEAHRNSWHVLLDATALVVGEDRLNLALH 303 (344)
Q Consensus 229 p~~~~--~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i-~Pl~~Ia~ar~~g~~vlvDAaQa~~G~~~LDLs~l 303 (344)
-..+. ....+.+++ .. +.....|.+++..+ |+. .|++.+. +++++|||+|++ |+.|+|++++
T Consensus 125 ~~~~~~~~~~~~~~~~----~~---~~~~~~v~~~hnETstGv~~~~~~~i~-----~~~lvVDa~Ss~-g~~pidv~~~ 191 (365)
T PLN02452 125 SGKDEKYTKIPSVSEW----EL---TPDAKFVHICANETIHGVEFKDYPDVG-----NVPLVADMSSNF-LSKPVDVSKY 191 (365)
T ss_pred ecCCCCCCCCCChHHc----CC---CCCCcEEEECCCCCCCcEecCcccccC-----CCeEEEECCccc-cCcccCHHHc
Confidence 11111 112344443 11 12367888888764 995 7776653 389999999999 9999999999
Q ss_pred CCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 304 RPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
++|| +|+||. +| |.|+|++++|+++++.
T Consensus 192 ~v~~--~saqK~-lG-P~Gl~~v~vr~~~l~~ 219 (365)
T PLN02452 192 GVIY--AGAQKN-VG-PSGVTIVIIRKDLIGN 219 (365)
T ss_pred CEEE--Eecccc-cC-CCCeEEEEEcHHHHhh
Confidence 9988 599998 87 9999999999988765
No 92
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.44 E-value=3.5e-12 Score=128.08 Aligned_cols=156 Identities=15% Similarity=0.052 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC--HHHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE--LDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~--~~~ir~la~~~G~kV~~vp~~~ 232 (344)
...++.++++|++.|+. + . ++++|+++|+++++.++ +++||+++. ...+. ...++.+++..|+++..++..
T Consensus 60 p~~~~Le~~lA~l~g~~-~--~-v~~~sG~~Ai~~~l~al-l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~- 133 (405)
T PRK08776 60 PTRDLLGEALAELEGGA-G--G-VITATGMGAINLVLNAL-LQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLT- 133 (405)
T ss_pred hHHHHHHHHHHHHhCCC-c--e-EEEcCHHHHHHHHHHHH-hCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCC-
Confidence 34567889999999974 2 3 45555689999999888 789998664 33343 223455566678888877642
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
+.++|++.+++ ++++|.+...+| |.+.+++.|.+ ++++|+++++|.+++. +...-.+ .+++|+++
T Consensus 134 -----d~~~l~~~i~~-----~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~a~-~~~~~pl-~~gaDivv 201 (405)
T PRK08776 134 -----DPRSLADALAQ-----SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLS-PALQKPL-EFGADLVL 201 (405)
T ss_pred -----CHHHHHHhcCc-----CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCCcc-cccCCcc-cccCCEEE
Confidence 56778887764 478888876666 99999987765 6999999999999998 6543233 36899999
Q ss_pred EccccCCCCCCCc--eEEEEEeC
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
+|+||+ +++|.+ .|++++++
T Consensus 202 ~S~tK~-l~g~~~~~~G~vv~~~ 223 (405)
T PRK08776 202 HSTTKY-INGHSDVVGGAVVARD 223 (405)
T ss_pred ecCcee-ecCCCCceEEEEEeCC
Confidence 999999 887865 46666654
No 93
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.44 E-value=3.7e-12 Score=127.11 Aligned_cols=156 Identities=13% Similarity=0.040 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp~~~ 232 (344)
...+..++++|++.|.. ++++|+|+++|+.+++.++ +++||+++ ....|+ ...+..++...|+++..++.
T Consensus 52 pt~~~L~~~lA~l~g~~----~~i~~~sg~~Ai~~~l~~l-~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~-- 124 (386)
T PRK08045 52 PTRDVVQRALAELEGGA----GAVLTNTGMSAIHLVTTVF-LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQ-- 124 (386)
T ss_pred ccHHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHH-cCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCC--
Confidence 35677899999999962 4999999999999998876 57899865 444455 22344555555667776642
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
.+.+++++++++ ++++|.+...+| |.++|++.|.+ ++++|+++++|.+++. +.....+ .+++|+++
T Consensus 125 ----~d~e~l~~~l~~-----~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay~~-~~~~~pl-~~gaDivv 193 (386)
T PRK08045 125 ----GDEQALRAALAE-----KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLS-PALQNPL-ALGADLVL 193 (386)
T ss_pred ----CCHHHHHHhccc-----CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCc-cccCCch-hhCCCEEE
Confidence 356788888764 478888887776 99999987765 6889999999999988 7554344 46899999
Q ss_pred EccccCCCCCCCc--eEEEEEeC
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
.|+||| ++||.+ .|++++++
T Consensus 194 ~S~tK~-l~G~~d~~~G~vi~~~ 215 (386)
T PRK08045 194 HSCTKY-LNGHSDVVAGVVIAKD 215 (386)
T ss_pred eeccee-ccCCCCceeEEEEeCc
Confidence 999999 877876 56665543
No 94
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.43 E-value=4.5e-12 Score=126.26 Aligned_cols=156 Identities=13% Similarity=0.017 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp~~~ 232 (344)
...++.++.+|++.|+ + .+++|+|+++|+.+++.++ +++||+++ ....|. ...+..++...|+++..++.
T Consensus 51 p~~~~le~~lA~l~g~--~--~v~~~~gg~~Ai~~~l~al-l~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~-- 123 (382)
T TIGR02080 51 PTRDLLQQALAELEGG--A--GAVVTNTGMSAIHLVTTAL-LGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQ-- 123 (382)
T ss_pred chHHHHHHHHHHHhCC--C--cEEEEcCHHHHHHHHHHHH-cCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECC--
Confidence 3457788899999995 3 5999999999999999988 78899965 344454 22344555555777776642
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
.+.+++++++++ ++++|.+...+| |.++|++.|.+ +|++|+++++|.+++. +...-++ .+++|+++
T Consensus 124 ----~d~~~l~~ai~~-----~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~~~-~~~~~pl-~~gaDivv 192 (382)
T TIGR02080 124 ----GDEQALRAALAQ-----KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTFLS-PALQNPL-ALGADLVL 192 (382)
T ss_pred ----CCHHHHHHhcCc-----CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhCCCEEE
Confidence 256778888865 478888876666 99999988865 6899999999999987 6543333 35789999
Q ss_pred EccccCCCCCCCc--eEEEEEeC
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
.|++|| ++++.+ .|++.+++
T Consensus 193 ~S~sK~-l~G~~~~~~G~i~~~~ 214 (382)
T TIGR02080 193 HSCTKY-LNGHSDVIAGAVIAKD 214 (382)
T ss_pred eeccee-ccCCCCceeEEEEeCC
Confidence 999999 776766 66666644
No 95
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.43 E-value=4e-12 Score=126.74 Aligned_cols=155 Identities=15% Similarity=0.019 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp~~~ 232 (344)
...++.++++|+++|++ +++.|++++.|+.+++.++ +++||+++ +...|. ...++.+ +..|+++..++.
T Consensus 53 p~~~~lE~~lA~l~g~~----~~l~~~sG~~Ai~~~l~~l-l~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~-- 124 (385)
T PRK08574 53 PTLRPLEEALAKLEGGV----DALAFNSGMAAISTLFFSL-LKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYP-- 124 (385)
T ss_pred ccHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHH-hCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECC--
Confidence 35677999999999974 2566678899999888877 67899865 444454 2334443 556888876542
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
+.++|++++++. ++++|.+...+| |.++|++.|.+ +|++|+++++|.+|+. |...-.+ .+++|+++
T Consensus 125 -----d~~~l~~~i~~~----~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~-~~~~~~l-~~GaDivv 193 (385)
T PRK08574 125 -----STEDIIEAIKEG----RTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFAT-PLLYRPL-RHGADFVV 193 (385)
T ss_pred -----CHHHHHHhcCcc----CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCc-cccCChh-hhCCcEEE
Confidence 356788887641 478888887776 99999987754 6999999999999998 7542223 46899999
Q ss_pred EccccCCCCCCCc-e-EEEEEeC
Q 035915 310 CNLDNTQNAQPSK-I-TCLLIRK 330 (344)
Q Consensus 310 ~S~HK~l~G~P~G-i-G~L~Vr~ 330 (344)
+|++|+ +++|.+ + |++++++
T Consensus 194 ~S~sK~-l~g~~d~~gG~vi~~~ 215 (385)
T PRK08574 194 HSLTKY-IAGHNDVVGGVAVAWS 215 (385)
T ss_pred eeCcee-ecCCCCceeEEEEECc
Confidence 999999 887854 3 5466543
No 96
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.43 E-value=7.7e-12 Score=125.30 Aligned_cols=163 Identities=13% Similarity=0.009 Sum_probs=117.2
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEE
Q 035915 150 PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVI 226 (344)
Q Consensus 150 ~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~ 226 (344)
.++......++.++++|+++|+. + .|+| +++++|+.+++.++ +++||+++ +...|. ...+..+++..|+++.
T Consensus 58 y~r~~~p~~~~le~~lA~l~g~~-~--~i~~-ssG~~Ai~~~l~al-l~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~ 132 (398)
T PRK08249 58 YSRNTNPTVQAFEEKVRILEGAE-A--ATAF-STGMAAISNTLYTF-LKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVT 132 (398)
T ss_pred ccCCCChHHHHHHHHHHHHhCCC-e--EEEe-CChHHHHHHHHHHh-cCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEE
Confidence 44555567799999999999984 2 3554 55578999888776 67899865 455555 2234555666799887
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCC
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALH 303 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l 303 (344)
.++. .+.+++++++++ +|++|.+...+| |.++|++.|.+ +|++|+.+++|.+++. +...-.+ .+
T Consensus 133 ~vd~------~d~e~l~~~i~~-----~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a~-~~~~~~l-~~ 199 (398)
T PRK08249 133 LCET------GDHEQIEAEIAK-----GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFAT-PINQNPL-AL 199 (398)
T ss_pred EcCC------CCHHHHHHhcCC-----CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcCc-cccCCch-hh
Confidence 7653 367788888865 478888876666 99999987765 6999999999999997 5432223 36
Q ss_pred CCcEEEEccccCCCCCCCc-e-EEEEEeCC
Q 035915 304 RPDFVLCNLDNTQNAQPSK-I-TCLLIRKK 331 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~G-i-G~L~Vr~~ 331 (344)
++|+++.|++|+ +|++.. + |+++.+++
T Consensus 200 ~~Divv~S~sK~-l~g~~~~~gG~vv~~~~ 228 (398)
T PRK08249 200 GADLVIHSATKF-LSGHADALGGVVCGSKE 228 (398)
T ss_pred CCCEEeccCcee-cCCCCCceEEEEECCHH
Confidence 899999999999 886542 4 44444443
No 97
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.43 E-value=1.1e-12 Score=134.62 Aligned_cols=175 Identities=14% Similarity=0.004 Sum_probs=119.0
Q ss_pred ChhhhhhH-HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCC----CC------------------------
Q 035915 149 FPGSFISI-PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPF----FR------------------------ 199 (344)
Q Consensus 149 ~~g~~as~-~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~----~~------------------------ 199 (344)
|.|-..-. ...-|.+++.++||++-. + |=--+++.|+..|..++-- .+
T Consensus 87 y~g~~~~d~ie~l~~~ra~~lf~a~~a--n-vqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~ 163 (493)
T PRK13580 87 YAGCQNVDTVEWEAAEHAKELFGAEHA--Y-VQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAE 163 (493)
T ss_pred cCCCchHHHHHHHHHHHHHHHhCCCcc--c-ccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhcc
Confidence 34444333 447889999999998643 2 3334666676666655421 11
Q ss_pred --CCeEEEc-CCcC---HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-cccccHH
Q 035915 200 --GNFYMTI-IGEE---LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTRYSMH 272 (344)
Q Consensus 200 --Gd~ivS~-~eH~---~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i~Pl~ 272 (344)
||.|++. .+|. ......-.......+...+++..++.+|.+++++.+++ .+.++++.+.|| |...|++
T Consensus 164 ~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~-----~~plvii~g~S~~~~~~dl~ 238 (493)
T PRK13580 164 LGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIAALARE-----FKPLILVAGYSAYPRRVNFA 238 (493)
T ss_pred CCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHHHHHhh-----cCCEEEEeCccccCCCcCHH
Confidence 6777643 3332 11110000111244555566655688999999999976 367888889997 8899998
Q ss_pred HHHH-HHhCCcEEEecccccCcCCccCCCC------CCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 273 WISE-AHRNSWHVLLDATALVVGEDRLNLA------LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 273 ~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs------~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
.|.+ ++++|++++||++|++ |++..++. ..++||+++|+||+ |+||.| |++++++++.+
T Consensus 239 ~i~eia~~~gA~L~VD~AH~~-Gligg~~~~~~~~~~~~~D~vtgT~hKa-L~GP~G-G~I~~~~~l~~ 304 (493)
T PRK13580 239 KLREIADEVGAVLMVDMAHFA-GLVAGKVFTGDEDPVPHADIVTTTTHKT-LRGPRG-GLVLAKKEYAD 304 (493)
T ss_pred HHHHHHHHcCCEEEEECchhh-ceeccccchhhcCCCCCCcEEEeCChhh-ccCCCe-EEEEecHHHHH
Confidence 8865 6899999999999999 99987662 13799999999999 655986 88998877543
No 98
>PLN02721 threonine aldolase
Probab=99.42 E-value=1.3e-12 Score=125.59 Aligned_cols=167 Identities=13% Similarity=0.094 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHH--HHHHcCCcEEEEEeCCCCC
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVR--EFASFKESKVILAPEAWLD 234 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir--~la~~~G~kV~~vp~~~~~ 234 (344)
..+.|+.+++++|++ .++||+|+|+++.++...+...+||+++ ....|... +. ..+...|++++.+|.+. +
T Consensus 42 ~~~l~~~la~~~~~~----~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~-~~~~~~~~~~g~~~~~v~~~~-~ 115 (353)
T PLN02721 42 ALRLEEEMAKIFGKE----AALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHL-YENGGISTLGGVHPRTVKNNE-D 115 (353)
T ss_pred HHHHHHHHHHHhCCc----eeEEecCccHHHHHHHHHHccCCCCeEEEcCccceeh-hcccchhhhcCceeEecCCCc-C
Confidence 578999999999984 2678888888876666655433899865 44444311 11 14556799999998764 4
Q ss_pred CccCHHHHHHHhhhcCC--CCCeeEEEEeCcc-c--cccccH---HHHH-HHHhCCcEEEecccccCcCCc---cCCCC-
Q 035915 235 LRIKGSQLSQYFRRKCK--HTPKGLFSYPADI-N--GTRYSM---HWIS-EAHRNSWHVLLDATALVVGED---RLNLA- 301 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~--~~~t~LVa~~avS-N--G~i~Pl---~~Ia-~ar~~g~~vlvDAaQa~~G~~---~LDLs- 301 (344)
+.++.++|++.+++... ..++++|.+...+ | |..+|. +.|. .++++|+++++|++++. +.. ..+..
T Consensus 116 ~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~-~~~~~~~~~~~~ 194 (353)
T PLN02721 116 GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIF-NASVALGVPVHR 194 (353)
T ss_pred CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhh-cchhhhCCCHHH
Confidence 67899999998873100 0247788886543 4 788885 4444 46899999999999986 531 12222
Q ss_pred -CCCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 302 -LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 302 -~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
..++|++++|+||| |++|.| |+++.+++..
T Consensus 195 ~~~~~d~~~~s~sK~-l~~~~G-~~~~~~~~~~ 225 (353)
T PLN02721 195 LVKAADSVSVCLSKG-LGAPVG-SVIVGSKSFI 225 (353)
T ss_pred HhhhCCEEEEecccc-cCCcee-eEEecCHHHH
Confidence 23799999999999 887744 3455555443
No 99
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.42 E-value=3.3e-12 Score=125.39 Aligned_cols=165 Identities=18% Similarity=0.178 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCC--
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWL-- 233 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~-- 233 (344)
...+.|+.+++++|++++ +|+||+|+|+|+++++.++ ..+|+.++ ....+. .....++..|++++.+|.+..
T Consensus 67 g~~~lr~~ia~~l~~~~~--~v~~~~g~t~al~~~~~~~-~~~gd~vl~~~p~y~--~~~~~~~~~g~~~~~v~~~~~~~ 141 (380)
T PRK06225 67 GFPELRELILKDLGLDDD--EALITAGATESLYLVMRAF-LSPGDNAVTPDPGYL--IIDNFASRFGAEVIEVPIYSEEC 141 (380)
T ss_pred chHHHHHHHHHhcCCCCC--cEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCc--chHHHHHHhCceEEeeccccccC
Confidence 367799999999999876 7999999999999999887 46788754 343333 123445567999999886421
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHH---HHH-HHHhCCcEEEeccccc---CcCCccC-CCCCC
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMH---WIS-EAHRNSWHVLLDATAL---VVGEDRL-NLALH 303 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~---~Ia-~ar~~g~~vlvDAaQa---~~G~~~L-DLs~l 303 (344)
+..++.+.+++.+++ +++++.+...+| |..++.+ .|. .|+++|+++++|.++. . ++.++ .+. .
T Consensus 142 ~~~~d~~~l~~~~~~-----~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~-~ 214 (380)
T PRK06225 142 NYKLTPELVKENMDE-----NTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAR-EHTLAAEYA-P 214 (380)
T ss_pred CccCCHHHHHhhcCC-----CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhc-cCCchhhcC-C
Confidence 246888999888764 366777665555 9998853 333 3588999999999863 2 32221 111 1
Q ss_pred CCcEEEEccccCCCCCCCc--eEEEEEeCCCccc
Q 035915 304 RPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFDT 335 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~~ 335 (344)
.-.+++.|+.|+ || +.| +|++++++++.+.
T Consensus 215 ~~~i~~~s~SK~-~g-~~G~RiG~i~~~~~l~~~ 246 (380)
T PRK06225 215 EHTVTSYSFSKI-FG-MAGLRIGAVVATPDLIEV 246 (380)
T ss_pred CCEEEEeechhh-cC-CccceeEEEecCHHHHHH
Confidence 335667788899 87 447 7999997765543
No 100
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.42 E-value=4.1e-12 Score=126.09 Aligned_cols=161 Identities=10% Similarity=0.013 Sum_probs=118.0
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC--HHHHHHHHHcCCcEEEEEe
Q 035915 153 FISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE--LDYVREFASFKESKVILAP 229 (344)
Q Consensus 153 ~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~--~~~ir~la~~~G~kV~~vp 229 (344)
.......+.++++++++|++ .+++++|+++|+.+++.++ +++||+++. ...|. ...+..++++.|+++..++
T Consensus 51 ~~~p~~~~le~~la~l~g~~----~~~~~~sG~~Ai~~al~al-~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~ 125 (380)
T TIGR01325 51 YANPTVAAFEERIAALEGAE----RAVATATGMSAIQAALMTL-LQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVD 125 (380)
T ss_pred CCCchHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHH-hCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEEC
Confidence 33445788999999999983 3788999999999888777 678998654 43344 2234555666799998887
Q ss_pred CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCc
Q 035915 230 EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPD 306 (344)
Q Consensus 230 ~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~D 306 (344)
.+ +.+++++.+++ ++++|.+...+| |.+.|++.|.+ +|++|+++++|.+++. +...-.+ .+++|
T Consensus 126 ~~------d~~~l~~~i~~-----~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~~-~~~~~pl-~~g~D 192 (380)
T TIGR01325 126 PT------DLNAWEAAVKP-----NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFAT-PVLQQPL-KLGAD 192 (380)
T ss_pred CC------CHHHHHHhcCC-----CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhCCC
Confidence 54 45678777754 477888876666 99999988865 6999999999999975 4322222 35899
Q ss_pred EEEEccccCCCCCCC-ce-EEEEEeCCC
Q 035915 307 FVLCNLDNTQNAQPS-KI-TCLLIRKKS 332 (344)
Q Consensus 307 Fvv~S~HK~l~G~P~-Gi-G~L~Vr~~~ 332 (344)
++++|++|+ ++++. .+ |+++.+++.
T Consensus 193 ivv~S~sK~-l~g~g~~~gG~vv~~~~~ 219 (380)
T TIGR01325 193 VVVYSATKH-IDGQGRVMGGVIAGSEEL 219 (380)
T ss_pred EEEeeccce-ecCCCCeEEEEEEeCHHH
Confidence 999999999 88663 24 555555544
No 101
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.41 E-value=4e-12 Score=123.74 Aligned_cols=199 Identities=16% Similarity=0.118 Sum_probs=140.9
Q ss_pred CCcCCCCCC---cccccchHHHHHHhhccCCC--ChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHH-Hh
Q 035915 120 PSFGSNLPD---LDRTQLEPSRLLDILTKKSS--FPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLV-GE 193 (344)
Q Consensus 120 ~~~Ga~lp~---~s~v~~~~~~L~~~L~gnss--~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlv-a~ 193 (344)
.|.|+- |+ ....+.+.++|.+.+.+.-. ....+. .-+..-.++|.++|+.++ +||.|.++|--++.+ +.
T Consensus 38 nSLGa~-p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~--lp~~lgdklApLiGA~~~--Evvv~dtts~nl~k~L~a 112 (407)
T COG3844 38 NSLGAR-PRAVTARLQQVATDEWGEGLIRSWNKAKADWFD--LPERLGDKLAPLIGARAG--EVVVTDTTSINLFKVLAA 112 (407)
T ss_pred cccccC-chHHHHHHHHHHHHHHHhhhhhhhcccCCchhh--chhHHHHHhhhhhcCCCC--ceEEeCCcchHHHHHHHH
Confidence 347777 53 33456666777776544311 111111 225566789999999877 699998888776654 44
Q ss_pred hCCCCCCCeEEEcCCcC--HH-H-HHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc--ccc
Q 035915 194 SYPFFRGNFYMTIIGEE--LD-Y-VREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI--NGT 267 (344)
Q Consensus 194 sl~~~~Gd~ivS~~eH~--~~-~-ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS--NG~ 267 (344)
.|..++|+.++..-.++ .+ . ...++.-.+.. .+- .+.+.+.++.+.++. .+.+|.+++++ +|.
T Consensus 113 alr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-----~~~-~~~~~P~~~~~~~~d-----d~AvV~L~~V~y~TGq 181 (407)
T COG3844 113 ALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-----YDL-EGVIAPRALEEAITD-----DVAVVLLSHVNYKTGQ 181 (407)
T ss_pred HhccCCCceEEeecCCCCCcchhhhcchhhhhccc-----ccc-eeeeChHHHHHhhcc-----ceEEEEeccccccccc
Confidence 67777787754332222 22 1 12222222211 111 245566688888875 58999999998 499
Q ss_pred cccHHHHH-HHHhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 268 RYSMHWIS-EAHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 268 i~Pl~~Ia-~ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
.+++..|. .+|++|+++.-|-+|++ |..|+||...++||-+.+.||.|-|||-+.++|||.++..+.
T Consensus 182 l~dm~aiT~~AH~~galv~wDLAHsa-Gavp~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~h~e~ 249 (407)
T COG3844 182 LLDMRAITALAHQHGALVGWDLAHSA-GAVPVDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPRHRER 249 (407)
T ss_pred eeeHHHHHHHHHhcCceEEeehhccc-CCcceeecccCCCeeeeeeceeccCCCCCceeEEeccccccc
Confidence 99998885 57999999999999999 999999999999999999999999999999999999887776
No 102
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.41 E-value=1.9e-12 Score=140.85 Aligned_cols=164 Identities=15% Similarity=0.064 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHH-H---HHHHHhhCCCCCC----Ce-EEEcCCcCHHHHHHHHHcCCcEEE
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRD-A---MMLVGESYPFFRG----NF-YMTIIGEELDYVREFASFKESKVI 226 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTe-A---lnlva~sl~~~~G----d~-ivS~~eH~~~~ir~la~~~G~kV~ 226 (344)
+.+.+-.+.+++++|.+ .+-|-+|++. | .-++++.|.-.+| +. +++..+|+.|... +...|++|+
T Consensus 543 q~i~elq~~l~eLtGmd----~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNpas--a~~~GieVv 616 (954)
T PRK12566 543 AMIDELEAWLCAITGFD----AICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNPAS--AQMAGMRVV 616 (954)
T ss_pred HHHHHHHHHHHHHHCCC----eEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCHHH--HHHCCCEEE
Confidence 35677789999999985 2566665444 2 2233444422222 33 4677778766432 455799999
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-cc-cccHHHHH-HHHhCCcEEEecccccCcCCccCC-CCC
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GT-RYSMHWIS-EAHRNSWHVLLDATALVVGEDRLN-LAL 302 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~-i~Pl~~Ia-~ar~~g~~vlvDAaQa~~G~~~LD-Ls~ 302 (344)
++|.+. +|.+|.++|++++++. ..++..|.++..++ |. ..|++.|. .+|++|++|++|++|.+ ++..++ ..+
T Consensus 617 ~Vp~D~-~G~iDle~L~a~I~~~--~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~-a~~~l~~Pg~ 692 (954)
T PRK12566 617 IVECDP-DGNVDLDDLKAKAAAA--GDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLN-AQVGLARPAD 692 (954)
T ss_pred EeccCC-CCCcCHHHHHHHhhcc--CCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChh-hccCCCChhh
Confidence 999985 6899999999999732 12355555555554 44 46687775 46999999999999999 999888 478
Q ss_pred CCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 303 HRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
+++||+++++||| ||+|.|.|++|+..
T Consensus 693 ~GADi~~~s~HKt-f~~P~G~GGP~vG~ 719 (954)
T PRK12566 693 IGADVSHMNLHKT-FCIPHGGGGPGMGP 719 (954)
T ss_pred cCCCEEEecCCcc-cCcCccCCCCccch
Confidence 9999999999999 98899999998877
No 103
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.41 E-value=8.3e-12 Score=123.13 Aligned_cols=161 Identities=12% Similarity=-0.034 Sum_probs=120.4
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEE
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVIL 227 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~ 227 (344)
++......++.++++++++|+. ..++++++++|+.+++.++ +++|++++ ....|+ ...+..+++..|+++..
T Consensus 35 ~r~~~p~~~~le~~la~l~g~~----~a~~~~sG~~Ai~~~l~~l-~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 109 (369)
T cd00614 35 SRIGNPTVDALEKKLAALEGGE----AALAFSSGMAAISTVLLAL-LKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTF 109 (369)
T ss_pred ECCCChhHHHHHHHHHHHHCCC----CEEEEcCHHHHHHHHHHHH-cCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence 3334456788889999999974 3677788899999998887 57899865 444555 23445556677999888
Q ss_pred EeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCC
Q 035915 228 APEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHR 304 (344)
Q Consensus 228 vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~ 304 (344)
++.+ +.+++++.+++ ++++|.+...+| |.+.|++.|.+ +|++|+++++|.+++. |... ..-.++
T Consensus 110 v~~~------d~~~l~~~i~~-----~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~~~-~~~~-~~~~~g 176 (369)
T cd00614 110 VDPD------DPEALEAAIKP-----ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFAT-PYLQ-RPLELG 176 (369)
T ss_pred eCCC------CHHHHHHhcCC-----CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-hhcC-ChhhhC
Confidence 8754 36678888764 477888877766 99999988865 6999999999999998 7541 112358
Q ss_pred CcEEEEccccCCCCCCCc--eEEEEEeC
Q 035915 305 PDFVLCNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
+|+++.|++|+ +|+|.. .|+++.++
T Consensus 177 ~Divv~S~tK~-l~g~~~~~gG~v~~~~ 203 (369)
T cd00614 177 ADIVVHSATKY-IGGHSDVIAGVVVGSG 203 (369)
T ss_pred CcEEEecccee-ccCCCCceEEEEEeCc
Confidence 99999999999 886632 67787766
No 104
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.41 E-value=4.7e-12 Score=125.93 Aligned_cols=160 Identities=11% Similarity=0.001 Sum_probs=117.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcC--HHHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEE--LDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~--~~~ir~la~~~G~kV~~vp~~~ 232 (344)
...++.++.+|+++|+. + .++++|++.|+..++.++ +++||+++.. ..|. ...+..++...|+++..++..
T Consensus 61 pt~~~Le~~lA~l~G~~-~---al~~~sG~~Ai~~~l~al-~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~- 134 (386)
T PRK06767 61 PTVKLFEERMAVLEGGE-E---ALAFGSGMAAISATLIGF-LKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDME- 134 (386)
T ss_pred cchHHHHHHHHHHhCCC-c---EEEECCHHHHHHHHHHHH-hCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCC-
Confidence 34677899999999974 2 455666678998888777 6789997643 3344 223444455567777666532
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
+.+++++++++ ++++|.+...+| |.+.|++.|.+ ++++|+++++|.+++. +....++. .++|+++
T Consensus 135 -----d~~~l~~~i~~-----~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a~-~~~~~pl~-~g~Div~ 202 (386)
T PRK06767 135 -----TEADIENKIRP-----NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCS-PYLQRPLE-LGCDAVV 202 (386)
T ss_pred -----CHHHHHHhhCc-----CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCcc-cccCCchh-cCCcEEE
Confidence 56778887764 478888877776 99999987765 6899999999999987 65544443 5899999
Q ss_pred EccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+|++|+ ++++.+ .|+++.+++..+
T Consensus 203 ~S~sK~-l~g~g~~~gG~v~~~~~~i~ 228 (386)
T PRK06767 203 HSATKY-IGGHGDVVAGVTICKTRALA 228 (386)
T ss_pred ecCcce-ecCCCCceeEEEEeChHHHH
Confidence 999999 887744 588887776443
No 105
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.41 E-value=7.4e-12 Score=125.21 Aligned_cols=161 Identities=14% Similarity=0.026 Sum_probs=120.8
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEE
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVIL 227 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~ 227 (344)
++......++.++++++++|++ .+++|+|+|+|+++++.++ +++||+|+ +...|. ...+..+++..|+++..
T Consensus 60 ~r~~~pt~~~Le~~lA~l~g~~----~~l~~~sgt~Ai~~~l~al-~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~ 134 (394)
T PRK07050 60 GLHATPTSLALAQRLAEIEGGR----HALLQPSGLAAISLVYFGL-VKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRF 134 (394)
T ss_pred CCCCCHHHHHHHHHHHHHhCCC----eEEEeccHHHHHHHHHHHH-hCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEE
Confidence 3444445688889999999973 5999999999999999888 78999965 455555 22344556777999988
Q ss_pred EeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCC
Q 035915 228 APEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHR 304 (344)
Q Consensus 228 vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~ 304 (344)
++.. +.+++++.+++ +|++|.+...+| |.+.+++.|.+ ++++|+++++|++++. |.. .+--+++
T Consensus 135 vd~~------~~~~l~~~i~~-----~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD~a~a~-~~~-~~~l~~G 201 (394)
T PRK07050 135 YDPL------IGAGIADLIQP-----NTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTYSA-GLA-FKPFEHG 201 (394)
T ss_pred ECCC------CHHHHHHhcCC-----CCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEECCccc-ccc-cCHHHcC
Confidence 7643 23568877765 478888876666 99999988865 6999999999999998 753 2222357
Q ss_pred CcEEEEccccCCCCCCCc--eEEEEEeC
Q 035915 305 PDFVLCNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
+|+++.|+.|+ +++..+ .|++++++
T Consensus 202 aDi~v~S~tK~-~~g~~~~~gG~v~~~~ 228 (394)
T PRK07050 202 VDISVQALTKY-QSGGSDVLMGATITAD 228 (394)
T ss_pred CeEEEEECCce-ecCCCCeeEEEEEECC
Confidence 89999999999 765544 56666644
No 106
>PRK06460 hypothetical protein; Provisional
Probab=99.41 E-value=4.1e-12 Score=126.15 Aligned_cols=165 Identities=11% Similarity=-0.022 Sum_probs=117.4
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcC-CcC--HHHHHHHHHcCCcEEE
Q 035915 150 PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTII-GEE--LDYVREFASFKESKVI 226 (344)
Q Consensus 150 ~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~-eH~--~~~ir~la~~~G~kV~ 226 (344)
.++......++.|+++|+++|+.. .++|++| ++|++.++.++ +++||+|+... .+. ...+...++..|+++.
T Consensus 39 y~r~~~p~~~~L~~~lA~l~g~~~---~v~~~sG-~~ai~~~l~al-~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~ 113 (376)
T PRK06460 39 YSREANPTVLELTKKIVELENAEM---GVAFSSG-MGAISTTALAL-LKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVD 113 (376)
T ss_pred eeCCCCccHHHHHHHHHHHhCCCc---EEEeCCH-HHHHHHHHHHH-hCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEE
Confidence 445555567899999999999953 5888666 68999988877 67899876432 222 2234455667799998
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCC
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALH 303 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l 303 (344)
.++.+. .+.+++.+++ ++++|.+...+| |.++|++.|.+ ++++|+++++|.+++. +.....+ .+
T Consensus 114 ~~~~~~------~~~l~~~~~~-----~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~~-~~~~~~l-~~ 180 (376)
T PRK06460 114 ASNPGS------DNIIEKAKSK-----RYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFST-PINQKPL-EL 180 (376)
T ss_pred EECCCC------HHHHHHhcCC-----CceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcCc-cccCChh-hc
Confidence 887542 2234443332 478898888777 99999987865 6899999999999987 6322222 35
Q ss_pred CCcEEEEccccCCCCCCCc--eEEEEEeCCCc
Q 035915 304 RPDFVLCNLDNTQNAQPSK--ITCLLIRKKSF 333 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~ 333 (344)
++|+++.|++|+ |+++.+ .|+++.++++.
T Consensus 181 ~~divv~S~sK~-l~G~~~~~~G~~~~~~~l~ 211 (376)
T PRK06460 181 GADIVVHSASKF-LAGHNDVIAGLAAGYGKLL 211 (376)
T ss_pred CCCEEEeeccee-ccCCCCceEEEEecCHHHH
Confidence 789999999999 886643 67777665543
No 107
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.40 E-value=6.4e-12 Score=125.47 Aligned_cols=160 Identities=9% Similarity=-0.005 Sum_probs=119.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC--HHHHHHHHHcCCcEEEEEeCC
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE--LDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~--~~~ir~la~~~G~kV~~vp~~ 231 (344)
....++.++++|+++|+.. .++++|++.|+.+++.++ +.+||+++. ...|. ...+...+...|+++..++.+
T Consensus 58 ~p~~~~le~~lA~l~g~~~----av~~~sG~~Ai~~~l~al-~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~ 132 (391)
T TIGR01328 58 NPTVSNLEGRIAFLEGTEA----AVATSSGMGAIAATLLTI-LKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMA 132 (391)
T ss_pred CchHHHHHHHHHHHhCCCc----EEEECCHHHHHHHHHHHH-hCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCC
Confidence 3456788899999999852 577778888998888777 678998654 43454 223455566779999888764
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEE
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFV 308 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFv 308 (344)
+.+++++++++ +|++|.+...+| |.+.|++.|.+ ++++|+++++|.+++. +...-.+ ..++|++
T Consensus 133 ------d~e~l~~~i~~-----~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~a~-~~~~~~~-~~g~Div 199 (391)
T TIGR01328 133 ------IPEEVKAHIKD-----NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTFAT-PMLTNPV-ALGVDVV 199 (391)
T ss_pred ------CHHHHHHhhcc-----CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCch-hccCCch-hcCCCEE
Confidence 46778888765 478888876666 99999987765 6999999999999998 6543333 3589999
Q ss_pred EEccccCCCCCCCc--eEEEEEeCCCc
Q 035915 309 LCNLDNTQNAQPSK--ITCLLIRKKSF 333 (344)
Q Consensus 309 v~S~HK~l~G~P~G--iG~L~Vr~~~~ 333 (344)
++|++|+ +|+|.+ .|+++.+++..
T Consensus 200 v~S~sK~-lgg~g~~~gG~v~~~~~li 225 (391)
T TIGR01328 200 VHSATKY-IGGHGDVVAGLICGKAELL 225 (391)
T ss_pred Ecccccc-ccCCCCceEEEEEcCHHHH
Confidence 9999999 987744 46666665543
No 108
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.40 E-value=9.9e-12 Score=124.72 Aligned_cols=159 Identities=13% Similarity=0.008 Sum_probs=118.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC--HHHHHHHHHcCCcEEEEEeCC
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE--LDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~--~~~ir~la~~~G~kV~~vp~~ 231 (344)
....++.++++|++.|++ .+++++|++.|+..++.++ +.+||++++ ...|. ...+...++..|++++.++.+
T Consensus 69 ~p~~~~le~~lA~l~g~~----~al~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~ 143 (403)
T PRK07810 69 NPTVSMFEERLRLIEGAE----ACFATASGMSAVFTALGAL-LGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGE 143 (403)
T ss_pred CchHHHHHHHHHHHhCCC----cEEEECChHHHHHHHHHHH-hCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCC
Confidence 334678889999999974 3788888889988887776 578999764 33443 223455566789999988742
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEE
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFV 308 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFv 308 (344)
+.+++++++++ +|++|.+...+| |.+.|++.|.. +|++|+++++|.+++. |...-.+ .+++|++
T Consensus 144 ------d~~~l~~ai~~-----~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~a~-~~~~~~~-~~gaDiv 210 (403)
T PRK07810 144 ------DLSQWEEALSV-----PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVFAT-PLLQRGL-PLGADVV 210 (403)
T ss_pred ------CHHHHHHhcCc-----CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCCc-cccCChh-hcCCcEE
Confidence 56788888875 477888876666 99999987765 6999999999999998 6553233 4589999
Q ss_pred EEccccCCCCCCCc--eEEEEEeCCC
Q 035915 309 LCNLDNTQNAQPSK--ITCLLIRKKS 332 (344)
Q Consensus 309 v~S~HK~l~G~P~G--iG~L~Vr~~~ 332 (344)
++|++|+ ++++.. .|+++.+++.
T Consensus 211 v~S~tK~-l~g~g~~~gG~v~~~~~~ 235 (403)
T PRK07810 211 VYSGTKH-IDGQGRVLGGAILGDREY 235 (403)
T ss_pred EccCCce-ecCCcCceeEEEEeChHH
Confidence 9999999 885532 4777666653
No 109
>PRK05968 hypothetical protein; Provisional
Probab=99.40 E-value=9.3e-12 Score=124.13 Aligned_cols=158 Identities=10% Similarity=-0.045 Sum_probs=115.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCH--HHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEEL--DYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~--~~ir~la~~~G~kV~~vp~~~ 232 (344)
...++.++++|+++|++. .++| +++|.|+.+++.++ +++||+++ +...|+. ..+...++..|+++.+++.+
T Consensus 63 p~~~~le~~lA~l~g~~~---av~~-~sG~~Ai~~al~al-~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 136 (389)
T PRK05968 63 PTVRAFEEMLAKLEGAED---ARGF-ASGMAAISSTVLSF-VEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGR- 136 (389)
T ss_pred hhHHHHHHHHHHHhCCCc---EEEE-CCHHHHHHHHHHHH-hCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCC-
Confidence 457889999999999952 4665 55567988777765 67899865 4555552 23455566779999888643
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
+.+++++++ + ++++|.+...+| +.+.|++.|.+ +|++|+++++|++++. +...-.+ .+++|+++
T Consensus 137 -----d~~~l~~~i-~-----~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~-~~~~~p~-~~g~Divv 203 (389)
T PRK05968 137 -----DEEAVAKAL-P-----GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSWAS-PVFQRPI-TLGVDLVI 203 (389)
T ss_pred -----CHHHHHHhc-c-----cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc-hhccCch-hcCCcEEE
Confidence 567787776 2 367888876555 78888877764 6999999999999988 7432222 35899999
Q ss_pred EccccCCCCCCCc--eEEEEEeCCCc
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRKKSF 333 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~~~~ 333 (344)
+|++|+ +++|.+ .|+++.+++..
T Consensus 204 ~S~tK~-l~g~~~~~gG~i~~~~~~~ 228 (389)
T PRK05968 204 HSASKY-LGGHSDTVAGVVAGSKEHI 228 (389)
T ss_pred eecccc-ccCCCCeEEEEEEECHHHH
Confidence 999999 887865 57777666544
No 110
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.39 E-value=5.3e-12 Score=137.69 Aligned_cols=167 Identities=14% Similarity=0.031 Sum_probs=120.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHH---HHHHhhCCCCC----CCe-EEEcCCcCHHHHHHHHHcCCcEEEE
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAM---MLVGESYPFFR----GNF-YMTIIGEELDYVREFASFKESKVIL 227 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAl---nlva~sl~~~~----Gd~-ivS~~eH~~~~ir~la~~~G~kV~~ 227 (344)
+.+.+....+++++|.+. .-++.++++.|- -++++.+.-.+ .+. +++..-|..|. ..++..|++|++
T Consensus 530 q~i~elq~~l~eltGmd~---~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP--asa~~~G~~Vv~ 604 (939)
T TIGR00461 530 ELIAQLEKWLCSITGFDA---ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP--ASAAMAGMQVVP 604 (939)
T ss_pred HHHHHHHHHHHHHHCCCC---cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH--HHHHHCCCEEEE
Confidence 467899999999999973 234555555332 22444432111 233 45666676442 124556999999
Q ss_pred EeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-ccccc-HHHHH-HHHhCCcEEEecccccCcCCccCC-CCCC
Q 035915 228 APEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTRYS-MHWIS-EAHRNSWHVLLDATALVVGEDRLN-LALH 303 (344)
Q Consensus 228 vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i~P-l~~Ia-~ar~~g~~vlvDAaQa~~G~~~LD-Ls~l 303 (344)
+|.+. +|.+|.++|++.+++. ..++++|.+++.|| |.+.| ++.|. .+|++|..++||++|.. ++..++ ..++
T Consensus 605 V~~d~-~G~iDle~L~~~i~~~--~~~taaV~iT~pst~G~~e~~I~eI~~iah~~G~~v~VDgAq~~-al~~l~~Pg~~ 680 (939)
T TIGR00461 605 VNCDQ-DGNIDLVDLKNKAEQH--GDELAAVMVTYPSTHGVFEPTIQHACDIVHSFGGQVYLDGANMN-AQVGLTSPGDL 680 (939)
T ss_pred eccCC-CCCcCHHHHHHHHhhc--CCceEEEEEEeCCcCceecccHHHHHHHHHHcCCEEEEEecChh-hCCCCCCcccc
Confidence 99874 6899999999999741 12588898988887 99988 98775 47999999999999988 666555 4679
Q ss_pred CCcEEEEccccCCCC-----CCCceEEEEEeCCC
Q 035915 304 RPDFVLCNLDNTQNA-----QPSKITCLLIRKKS 332 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G-----~P~GiG~L~Vr~~~ 332 (344)
++||+++|+||+ || ||.|+|++++|+.+
T Consensus 681 GaDi~~~s~HKt-f~~P~G~GGPg~G~i~vr~~L 713 (939)
T TIGR00461 681 GADVCHLNLHKT-FCIPHGGGGPGMGPIGVKSHL 713 (939)
T ss_pred CCCEEEecCCcc-CCCCCCCCCCCeEEEEEhhhc
Confidence 999999999998 55 34477999999753
No 111
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.38 E-value=1.5e-11 Score=122.42 Aligned_cols=157 Identities=10% Similarity=-0.056 Sum_probs=113.1
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEeC
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAPE 230 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp~ 230 (344)
........+++++++.|+.. .| +++|++.|+.+++.. +++|++++ +...|+ ...+..++...|+++..++.
T Consensus 48 ~~p~~~~Le~~la~l~g~~~---al-~~~SG~~Al~~~l~~--l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~ 121 (380)
T PRK06176 48 GNPTRFALEELIADLEGGVK---GF-AFASGLAGIHAVFSL--FQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT 121 (380)
T ss_pred CChhHHHHHHHHHHHhCCCC---EE-EECCHHHHHHHHHHH--cCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC
Confidence 33346778889999999742 34 556667799877753 47899965 444454 22345556677999888764
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcE
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDF 307 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DF 307 (344)
. +.+++++++++ ++++|.+...+| |.++|++.|.+ +|++|+++++|.+++. +.....+ .+++|+
T Consensus 122 ~------d~e~l~~ai~~-----~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~a~-~~~~~p~-~~gaDi 188 (380)
T PRK06176 122 S------DLSQIKKAIKP-----NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFAT-PYYQNPL-LLGADI 188 (380)
T ss_pred C------CHHHHHHhcCc-----CceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCccc-cccCCcc-ccCCCE
Confidence 2 56778888765 478888765566 99999987765 6999999999999997 6543334 478999
Q ss_pred EEEccccCCCCCCCc--eEEEEEeC
Q 035915 308 VLCNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 308 vv~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
+++|++|+ +++|.. .|+++.++
T Consensus 189 vv~S~tK~-l~g~~d~~gG~vv~~~ 212 (380)
T PRK06176 189 VVHSGTKY-LGGHSDVVAGLVTTNN 212 (380)
T ss_pred EEecCcee-ccCCccceeeEEEecH
Confidence 99999999 887753 44455543
No 112
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.37 E-value=1.6e-11 Score=121.47 Aligned_cols=150 Identities=16% Similarity=0.065 Sum_probs=108.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC-HH-HHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE-LD-YVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~-~~-~ir~la~~~G~kV~~vp~~~ 232 (344)
....+.++++|++. . + ++++++|+++|+++++.++ +++||+++. ...+. .. .++..+++.|++++.++.+.
T Consensus 51 p~~~~Le~~lA~l~--~-~--~~v~~~sG~~Ai~~~l~al-l~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~ 124 (366)
T PRK07582 51 PTWRALEAALGELE--G-A--EALVFPSGMAAITAVLRAL-LRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAG 124 (366)
T ss_pred ccHHHHHHHHHHHc--C-C--CEEEECCHHHHHHHHHHHh-cCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCC
Confidence 35677888899998 2 2 3666777788999998887 789999764 33443 22 22333456799999998753
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEeccccc--CcCCccCCCCCCCCcE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATAL--VVGEDRLNLALHRPDF 307 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa--~~G~~~LDLs~l~~DF 307 (344)
. . + .+.+ +++||.+...+| |.+.|++.|.+ +|++|+.++||.+++ . |..+++ +++|+
T Consensus 125 ~-~----~----~~~~-----~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~~~~-~~~p~~---~g~Di 186 (366)
T PRK07582 125 M-A----E----AALA-----GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTATPL-GQRPLE---LGADL 186 (366)
T ss_pred h-H----H----Hhcc-----CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCCCcc-ccCchh---cCCcE
Confidence 1 1 1 1122 477888776666 88999987765 689999999999985 4 666665 47899
Q ss_pred EEEccccCCCCCCCc--eEEEEEeC
Q 035915 308 VLCNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 308 vv~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
++.|+||| +++|.| .|+++.++
T Consensus 187 vv~S~sK~-l~G~~g~~~G~v~~~~ 210 (366)
T PRK07582 187 VVASDTKA-LTGHSDLLLGYVAGRD 210 (366)
T ss_pred EEeccccc-ccCCCCeeEEEEEcCc
Confidence 99999999 877877 47777653
No 113
>PLN02509 cystathionine beta-lyase
Probab=99.37 E-value=2e-11 Score=125.04 Aligned_cols=156 Identities=13% Similarity=0.004 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCH--HHHHHHHHcCCcEEEEEeCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEEL--DYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~--~~ir~la~~~G~kV~~vp~~~~ 233 (344)
..++..+.+|++.|.. . .|+| ++++.++.++.. + +++||+|+ +...|.. ..+..+....|++++.++..
T Consensus 134 t~~aLE~~lA~leg~e-~--ai~~-~SG~aAi~~il~-l-l~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~-- 205 (464)
T PLN02509 134 TRDALESLLAKLDKAD-R--AFCF-TSGMAALSAVTH-L-IKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-- 205 (464)
T ss_pred HHHHHHHHHHHHhCCC-E--EEEe-CcHHHHHHHHHH-H-hCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCC--
Confidence 4567777888898863 1 3555 555788877664 3 57899966 4444542 23445556679998887632
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEEE
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLC 310 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~ 310 (344)
+.+++++++++ +|++|.+...+| |.+.|++.|.+ +|++|+++++|.+|+. |.....+ .+++|++++
T Consensus 206 ----d~e~l~~ai~~-----~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a~-~~~~~pl-~~gaDivv~ 274 (464)
T PLN02509 206 ----NLDEVAAAIGP-----QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIMS-PVLSRPL-ELGADIVMH 274 (464)
T ss_pred ----CHHHHHHhCCc-----CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCccc-cccCChh-hcCCcEEEe
Confidence 46778888865 478998888877 99999987764 6999999999999998 7654333 368999999
Q ss_pred ccccCCCCCCCc--eEEEEEeCCC
Q 035915 311 NLDNTQNAQPSK--ITCLLIRKKS 332 (344)
Q Consensus 311 S~HK~l~G~P~G--iG~L~Vr~~~ 332 (344)
|++|| +++|.+ .|+++++++.
T Consensus 275 S~tK~-l~G~gdv~gG~v~~~~~~ 297 (464)
T PLN02509 275 SATKF-IAGHSDVMAGVLAVKGEK 297 (464)
T ss_pred cCccc-ccCCCccceeEEEeccHH
Confidence 99999 887866 6778776543
No 114
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.36 E-value=1.5e-11 Score=125.83 Aligned_cols=194 Identities=15% Similarity=0.085 Sum_probs=134.4
Q ss_pred ccchHHHHHHhhccCCCChhh--hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC--C-----C-CC-
Q 035915 132 TQLEPSRLLDILTKKSSFPGS--FISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP--F-----F-RG- 200 (344)
Q Consensus 132 v~~~~~~L~~~L~gnss~~g~--~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~--~-----~-~G- 200 (344)
.....+.+...+..|.-.++. .++...+++=.-+++++|++ ++..=+||+|+|||+.+.+..-. | . .+
T Consensus 75 ~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 75 PPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred HHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 334445555556666322222 34446688889999999996 44578999999999886443321 1 1 01
Q ss_pred ---C-eEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-cccccHHHHH
Q 035915 201 ---N-FYMTIIGEELDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTRYSMHWIS 275 (344)
Q Consensus 201 ---d-~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i~Pl~~Ia 275 (344)
- +++.+..-| -++...++..|++++.+|.+..+.++|.++|++++++.+... .+|+....-. |.+=||+.|+
T Consensus 154 ~~~~P~ii~s~~aH-~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g--~vV~~aGtT~~G~iDdi~~ia 230 (460)
T COG0076 154 PGGKPNIVCSETAH-FSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGG--VVVGTAGTTDTGSIDDIEELA 230 (460)
T ss_pred cCCCCeEEecCcch-hHHHHHHHHhCCCceeEEeccCccccCHHHHHHHHHhhccCc--eEEEEecCCCCCccCCHHHHH
Confidence 1 344443322 236666777899999988876467899999999998753111 1555554443 9999999997
Q ss_pred H-HHhCCcEEEecccccCcCCccC-------CCCCCCCcEEEEccccCCCCCCCceEEEEEeCC
Q 035915 276 E-AHRNSWHVLLDATALVVGEDRL-------NLALHRPDFVLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 276 ~-ar~~g~~vlvDAaQa~~G~~~L-------DLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
. |+++++++|||||=.- ...++ |+..-++|-+++++||| +..|.|+|++++|++
T Consensus 231 ~ia~~~~i~lHVDAA~GG-~~~pf~~~~~~~~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~ 292 (460)
T COG0076 231 DIAEEYGIWLHVDAAFGG-FLLPFLEPDGRWDFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDE 292 (460)
T ss_pred HHHHHcCCcEEEEccccc-eeecccCccchhhcCCCCceEEEECcccc-cCCCCCceEEEEECH
Confidence 6 5899999999998765 44432 34445899999999999 667999999999987
No 115
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.36 E-value=2.5e-11 Score=120.93 Aligned_cols=197 Identities=16% Similarity=0.095 Sum_probs=124.8
Q ss_pred cccchHHHHHHhhccCC-C-ChhhhhhHHHHHHHHHHHHHcCCCCC-----CCeEEEeCCHHHHHHHHHhhC--------
Q 035915 131 RTQLEPSRLLDILTKKS-S-FPGSFISIPEIQARNKVLKHCGLPDD-----EYLVLFTPNYRDAMMLVGESY-------- 195 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gns-s-~~g~~as~~le~AR~~IA~~Lga~p~-----ey~VVFTsnaTeAlnlva~sl-------- 195 (344)
......+.+...+..|. . ..+..++....++-+.+++++|.+.+ +..=+||+|+|+|+...+...
T Consensus 52 ~~~i~~~~l~~~~n~n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~ 131 (373)
T PF00282_consen 52 PASILADLLASALNQNGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRS 131 (373)
T ss_dssp HHHHHHHHHHHHHT-BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcccccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhh
Confidence 34444555555555552 2 23334555678899999999999721 235799999999976433211
Q ss_pred ---CCC-CCCe--EEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCee-EEEEeCcc-c-c
Q 035915 196 ---PFF-RGNF--YMTIIGEELDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKG-LFSYPADI-N-G 266 (344)
Q Consensus 196 ---~~~-~Gd~--ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~-LVa~~avS-N-G 266 (344)
... .+.. |+|...|.+ +...|.-.|+.++.||.+. +++++.++|++.+......+.+- +|+.++-+ + |
T Consensus 132 ~~~~~~~~~~~~i~~s~~aH~S--~~Kaa~~lGlg~~~I~~~~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~G 208 (373)
T PF00282_consen 132 KAKGVEEIPKPVIYVSEQAHYS--IEKAARILGLGVRKIPTDE-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTG 208 (373)
T ss_dssp HHHTTTHCSSEEEEEETTS-TH--HHHHHHHTTSEEEEE-BBT-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTS
T ss_pred hhcccccccccccccccccccH--HHHhcceeeeEEEEecCCc-chhhhHHHhhhhhcccccccccceeeeccCCCcccc
Confidence 000 1122 345555553 5555667799999999987 58999999998886432111222 34444333 3 9
Q ss_pred ccccHHHHHH-HHhCCcEEEecccccCcCCc------cCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 267 TRYSMHWISE-AHRNSWHVLLDATALVVGED------RLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 267 ~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~------~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
.+=|++.|.. ++++++++||||+... ... +++..-.++|-+++++||| ++.|.++|++++|+..
T Consensus 209 a~D~l~~i~~i~~~~~~wlHVDaA~gg-~~~~~~~~~~~~~gi~~adSit~d~HK~-l~~P~~~~~~l~r~~~ 279 (373)
T PF00282_consen 209 AIDPLEEIADICEKYNIWLHVDAAYGG-SALLSPEYRHLLFGIERADSITIDPHKW-LGVPYGCGVLLVRDKS 279 (373)
T ss_dssp BB-SHHHHHHHHHHCT-EEEEEETTGG-GGGGHCTTGGGGTTGGGESEEEEETTTT-TS-SSS-EEEEESSGG
T ss_pred cccCHHHHhhhccccceeeeecccccc-cccccccccccccccccccccccchhhh-hcCCccceeEEeeccc
Confidence 9999988875 5889999999997664 221 2222334699999999999 7789999999999864
No 116
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.36 E-value=3.3e-11 Score=118.95 Aligned_cols=156 Identities=13% Similarity=0.068 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
.++..+.+++++|++ .+++|+|+|+|+++++..+.+++||+|+ ....|.. ....+...|++++.++.+..+..
T Consensus 33 ~~~~e~~la~~~g~~----~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~--~~~~~~~~G~~~v~~d~d~~~~~ 106 (375)
T PRK11706 33 TRRCQQWLEQRFGSA----KVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVS--TANAFVLRGAKIVFVDIRPDTMN 106 (375)
T ss_pred HHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHH--HHHHHHHcCCEEEEEecCCCcCC
Confidence 455566788889883 5999999999999988777678899865 4555442 22334456999999998865456
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCC--CCCcEEEEccc
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLAL--HRPDFVLCNLD 313 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~--l~~DFvv~S~H 313 (344)
++.++|++.+++ ++++|.+.+ .+|...+++.|.+ ++++|+.++.|++|+. |.. .+-.. ...|+-+||+|
T Consensus 107 ~d~~~le~~i~~-----~tk~i~~~~-~~G~~~~~~~i~~la~~~~i~vIeD~a~a~-g~~-~~~~~~g~~~~~~~~Sf~ 178 (375)
T PRK11706 107 IDETLIEAAITP-----KTRAIVPVH-YAGVACEMDTIMALAKKHNLFVVEDAAQGV-MST-YKGRALGTIGHIGCFSFH 178 (375)
T ss_pred cCHHHHHHhcCC-----CCeEEEEeC-CCCCccCHHHHHHHHHHcCCEEEEECcccc-ccc-cCCeeeecCcCEEEEeCC
Confidence 889999998865 366666543 2599999977754 6899999999999999 862 22221 12599999999
Q ss_pred --cCCCCCCCce-EEEEEeC
Q 035915 314 --NTQNAQPSKI-TCLLIRK 330 (344)
Q Consensus 314 --K~l~G~P~Gi-G~L~Vr~ 330 (344)
|. ++ + |. |++++++
T Consensus 179 ~~K~-l~-~-g~gG~~~~~~ 195 (375)
T PRK11706 179 ETKN-YT-A-GEGGALLIND 195 (375)
T ss_pred CCcc-cc-c-cCCeEEEECC
Confidence 98 76 4 54 4455543
No 117
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.36 E-value=1.2e-11 Score=124.36 Aligned_cols=165 Identities=11% Similarity=-0.013 Sum_probs=112.8
Q ss_pred hhhHHHHH-HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHH---HHHHHHHcCCcEE--
Q 035915 153 FISIPEIQ-ARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELD---YVREFASFKESKV-- 225 (344)
Q Consensus 153 ~as~~le~-AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~---~ir~la~~~G~kV-- 225 (344)
.....+|+ +++++++++|+. +.++|++++|.|+..++.++ .++||+|++ ...|... ..+. ...+..+
T Consensus 70 ~~~~~lE~~~~~~la~l~g~~---~alv~~~SG~~A~~~~l~al-~~~GD~Vl~~~~~~~~~~~~g~~~--~~~~~~~~~ 143 (416)
T PRK13034 70 EFVDEVEALAIERAKQLFGCD---YANVQPHSGSQANGAVYLAL-LKPGDTILGMSLSHGGHLTHGAKV--SLSGKWYNA 143 (416)
T ss_pred hHHHHHHHHHHHHHHHHhCCC---ceEEecCCcHHHHHHHHHHh-cCCCCEEEEcCccceeeeecCCcc--eeccceeee
Confidence 33445666 999999999985 24678889999999999888 789999764 4444321 1110 0012222
Q ss_pred EEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCC--
Q 035915 226 ILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLAL-- 302 (344)
Q Consensus 226 ~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~-- 302 (344)
...+.+..++.++.+++++.+... ++++|.+...++|...|++.|.+ ++++|+++++|+||++ |........
T Consensus 144 ~~~~~~~~~~~~d~~~le~~l~~~----~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~Aha~-G~~~~g~~~~~ 218 (416)
T PRK13034 144 VQYGVDRLTGLIDYDEVEELAKEH----KPKLIIAGFSAYPRELDFARFREIADEVGALLMVDMAHIA-GLVAAGEHPNP 218 (416)
T ss_pred EEcccccccCCcCHHHHHHHHhhc----CCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeCcccc-cCcccCCCCCC
Confidence 233333334568899999887542 35777665444699999988865 6999999999999998 876443311
Q ss_pred -CCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 303 -HRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 303 -l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
..+|++++|+||| +++|.| |+++.++
T Consensus 219 ~~~~Di~~~s~~K~-l~g~~G-G~v~~~~ 245 (416)
T PRK13034 219 FPHAHVVTTTTHKT-LRGPRG-GMILTND 245 (416)
T ss_pred CCCceEEEEeCccc-CCCCCC-eEEEECc
Confidence 2589999999999 766877 5555544
No 118
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.36 E-value=1.4e-11 Score=120.03 Aligned_cols=162 Identities=12% Similarity=0.077 Sum_probs=115.8
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCccC
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLDLRIK 238 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i~ 238 (344)
.+.|+.+|+++|++++ +|++|+|+++++++++.++ +++|+.++.. ++........+...|++++.+|.+ +..++
T Consensus 70 ~~lr~~ia~~~~~~~~--~i~~t~G~~~~l~~~~~~l-~~~gd~vl~~-~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~ 143 (367)
T PRK02731 70 FELKAALAEKFGVDPE--RIILGNGSDEILELLARAY-LGPGDEVIYS-EHGFAVYPIAAQAVGAKPVEVPAK--DYGHD 143 (367)
T ss_pred HHHHHHHHHHhCcCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEe-cCCHHHHHHHHHHcCCeEEEeccc--CCCCC
Confidence 5799999999999876 7999999999999999888 5788886543 122222333456679999998875 34678
Q ss_pred HHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHh--CCcEEEecccccCcCCc------cCCCCCC-CCc
Q 035915 239 GSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHR--NSWHVLLDATALVVGED------RLNLALH-RPD 306 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~--~g~~vlvDAaQa~~G~~------~LDLs~l-~~D 306 (344)
.+++++.+++ ++++|.++..+| |.++|++++.+ ++. +|+++++|.++.. ... .+++-+. .-.
T Consensus 144 ~~~l~~~~~~-----~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~~~~~~ 217 (367)
T PRK02731 144 LDAMLAAVTP-----RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAE-YVRRKDYEDGLELVAKFPNV 217 (367)
T ss_pred HHHHHHHhCC-----CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHH-hccCcCcccHHHHHhhcCCE
Confidence 8999888864 467888876666 99999987765 343 4899999999763 211 1121111 224
Q ss_pred EEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 307 FVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 307 Fvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+++.|+=|. ||.| | +|+++++++..+
T Consensus 218 i~~~S~SK~-~g~~-G~RiG~l~~~~~~~~ 245 (367)
T PRK02731 218 VVTRTFSKA-YGLA-GLRVGYGIAPPEIID 245 (367)
T ss_pred EEEeeehHh-hcCc-ccceeeeeCCHHHHH
Confidence 666688898 8745 5 699998876543
No 119
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.35 E-value=4.9e-11 Score=117.30 Aligned_cols=179 Identities=10% Similarity=0.022 Sum_probs=119.3
Q ss_pred cchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCH
Q 035915 133 QLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEEL 211 (344)
Q Consensus 133 ~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~ 211 (344)
.++.+.+.+.+..+.-... ...+++-.+++++++|+. .++.|+|+|.||.+++.++.+++|++|+ +.+....
T Consensus 5 ~e~~~~v~~~l~s~~~~~~---g~~~~~fE~~~a~~~g~~----~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~ 77 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLSTY---GPYVEEFEKEFAEYFGVK----YAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPA 77 (363)
T ss_dssp HHHHHHHHHHHHHTCCSSS---SHHHHHHHHHHHHHHTSS----EEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-TH
T ss_pred HHHHHHHHHHHHhCCccCC---CHHHHHHHHHHHHHhCCC----eEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchH
Confidence 4455666665555522120 234566777899999974 5899999999999999999999999965 5555331
Q ss_pred HHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccc
Q 035915 212 DYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATA 290 (344)
Q Consensus 212 ~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQ 290 (344)
.... ....|++++.++++..++.++.+.+++++++ +|+.|.++|. .|...+++.|.. |+++|+.++-||+|
T Consensus 78 -~~~a-i~~~G~~pv~~Di~~~~~~id~~~~~~~i~~-----~t~ai~~~h~-~G~~~d~~~i~~~~~~~~i~lIeD~a~ 149 (363)
T PF01041_consen 78 -TASA-ILWAGAEPVFVDIDPETLNIDPEALEKAITP-----KTKAILVVHL-FGNPADMDAIRAIARKHGIPLIEDAAQ 149 (363)
T ss_dssp -HHHH-HHHTT-EEEEE-BETTTSSB-HHHHHHHHHT-----TEEEEEEE-G-GGB---HHHHHHHHHHTT-EEEEE-TT
T ss_pred -HHHH-HHHhccEEEEEeccCCcCCcCHHHHHHHhcc-----CccEEEEecC-CCCcccHHHHHHHHHHcCCcEEEcccc
Confidence 1122 2346999999999877889999999999986 3667766643 588889988865 69999999999999
Q ss_pred cCcCCccCC--CCCCCCcEEEEccc--cCCCCCCCce-EEEEEeCC
Q 035915 291 LVVGEDRLN--LALHRPDFVLCNLD--NTQNAQPSKI-TCLLIRKK 331 (344)
Q Consensus 291 a~~G~~~LD--Ls~l~~DFvv~S~H--K~l~G~P~Gi-G~L~Vr~~ 331 (344)
+. |..--+ +.. --|+.+||+| |. + +.|- |+++.+++
T Consensus 150 a~-g~~~~g~~~G~-~gd~~~fSf~~~K~-i--~~geGG~v~~~~~ 190 (363)
T PF01041_consen 150 AF-GARYKGRPVGS-FGDIAIFSFHPTKI-I--TTGEGGAVVTNDP 190 (363)
T ss_dssp TT-T-EETTEETTS-SSSEEEEESSTTSS-S---SSS-EEEEESTH
T ss_pred cc-CceeCCEeccC-CCCceEecCCCCCC-C--cCCCCeeEEecHH
Confidence 99 864222 222 2499999998 77 5 4444 55565553
No 120
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.35 E-value=2.6e-11 Score=123.82 Aligned_cols=173 Identities=13% Similarity=0.072 Sum_probs=119.3
Q ss_pred ccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCc
Q 035915 144 TKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKES 223 (344)
Q Consensus 144 ~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~ 223 (344)
.+...|.+.. -+.+.|++|++++|.. .|++|+|+|+|++++..++ +++|| ++...-|-.. .+......|+
T Consensus 69 ~g~~~Y~~~~---g~~~Lreaia~~~~~~----~vv~t~ggt~A~~~~~~al-l~pGD-Vii~~p~~~~-~~~~i~~~G~ 138 (460)
T PRK13238 69 RGDEAYAGSR---SYYRLEDAVKDIFGYP----YTIPTHQGRAAEQILFPVL-IKKGD-VVPSNYHFDT-TRAHIELNGA 138 (460)
T ss_pred hCCcccCCCC---CHHHHHHHHHHHhCCC----cEEECCCHHHHHHHHHHHh-CCCCC-EEccCCcccc-hHHHHHHcCC
Confidence 4554454433 3456788899999873 4999999999999998887 78999 5533222211 1222334689
Q ss_pred EEEEEeCCC---------CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--c-ccccHH---HHHH-HHhCCcEEEec
Q 035915 224 KVILAPEAW---------LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--G-TRYSMH---WISE-AHRNSWHVLLD 287 (344)
Q Consensus 224 kV~~vp~~~---------~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G-~i~Pl~---~Ia~-ar~~g~~vlvD 287 (344)
+++.+|.+. ..+.++.++|++.++++. ..+++++.+...+| | ..++.+ .|.+ |+++|++++.|
T Consensus 139 ~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~-~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~D 217 (460)
T PRK13238 139 TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVG-AENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVID 217 (460)
T ss_pred EEEEEeccccccccccccccCCcCHHHHHHHHhhcC-CCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999888742 125599999999997521 12578888886666 4 787764 4544 58899999999
Q ss_pred ccccCcCC-----------ccCCCCC------CCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 288 ATALVVGE-----------DRLNLAL------HRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 288 AaQa~~G~-----------~~LDLs~------l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
++|.. +. ...++.+ ...|++++|+||+ +++|.| |+|+.++
T Consensus 218 aa~~~-e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~-g~~~~G-G~i~~~d 274 (460)
T PRK13238 218 AARFA-ENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKD-AMVNIG-GLLCFRD 274 (460)
T ss_pred Ccchh-hhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccC-CCCcce-eEEEcCh
Confidence 99965 42 2223221 2489999999998 666876 8888774
No 121
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.35 E-value=2.3e-11 Score=121.69 Aligned_cols=160 Identities=12% Similarity=0.000 Sum_probs=118.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCH--HHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEEL--DYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~--~~ir~la~~~G~kV~~vp~~~ 232 (344)
....+.++++|++.|.+ .+++++|+++|+.+++.++ +++||+++ +...|.. ..+...++..|++++.++.+
T Consensus 64 p~~~~Le~~iA~~~g~~----~~l~~~sG~~Ai~~al~~l-l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~- 137 (400)
T PRK06234 64 PTSTEVENKLALLEGGE----AAVVAASGMGAISSSLWSA-LKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTS- 137 (400)
T ss_pred ccHHHHHHHHHHHhCCC----cEEEEcCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCC-
Confidence 34677899999999973 3788888889998877766 57899865 4444552 22334456679999888753
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhC--CcEEEecccccCcCCccCCCCCCCCcE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRN--SWHVLLDATALVVGEDRLNLALHRPDF 307 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~--g~~vlvDAaQa~~G~~~LDLs~l~~DF 307 (344)
+.+++++.+++ ++++|.+...+| |.+.|++.|.+ ++++ |+++++|.+++. +.....+ .+++|+
T Consensus 138 -----d~e~l~~~i~~-----~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~~~-~~~~~~l-~~g~Di 205 (400)
T PRK06234 138 -----NLEEVRNALKA-----NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTFCT-PYIQRPL-QLGADV 205 (400)
T ss_pred -----CHHHHHHHhcc-----CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCCCc-hhcCCch-hhCCcE
Confidence 56788888865 477888877666 99999987765 5775 999999999988 7543333 358999
Q ss_pred EEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 308 VLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
++.|++|+ +++|.. .|+++.+++..+
T Consensus 206 vv~S~sK~-l~g~g~~~gG~v~~~~~~~~ 233 (400)
T PRK06234 206 VVHSATKY-LNGHGDVIAGFVVGKEEFIN 233 (400)
T ss_pred EEeecccc-ccCCCCceeEEEEecHHHHH
Confidence 99999999 886732 588887765433
No 122
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.33 E-value=1.8e-11 Score=118.68 Aligned_cols=162 Identities=10% Similarity=0.048 Sum_probs=115.8
Q ss_pred HHHHHHHHHHcCCCCCCCeEEE-eCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCcc
Q 035915 159 IQARNKVLKHCGLPDDEYLVLF-TPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLDLRI 237 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVF-TsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i 237 (344)
.+.|+.+|+++|++++ +|++ |+|+++++++++.++ .++|+.++...-+ ...+...++..|++++.+|.+. ++.+
T Consensus 72 ~~lr~~ia~~~~~~~~--~i~~~~~Ga~~~i~~~~~~~-~~~gd~vlv~~p~-y~~~~~~~~~~g~~~~~~~~~~-~~~~ 146 (361)
T PRK00950 72 PELREALSKYTGVPVE--NIIVGGDGMDEVIDTLMRTF-IDPGDEVIIPTPT-FSYYEISAKAHGAKPVYAKREE-DFSL 146 (361)
T ss_pred HHHHHHHHHHhCCCHH--HEEEeCCCHHHHHHHHHHHh-cCCCCEEEEcCCC-hHHHHHHHHHcCCEEEEeecCC-CCCc
Confidence 7799999999999876 6888 789999999988877 5688886533221 2223334566799999998654 4468
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCc--cCCC-CCCCCcEEEEc
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGED--RLNL-ALHRPDFVLCN 311 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~--~LDL-s~l~~DFvv~S 311 (344)
+.++|++.+++ +++++.++..+| |.++|++.+.+ ++++|+++++|.++.- -.. ...+ ...+--+++.|
T Consensus 147 ~~~~l~~~~~~-----~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~-~~~~~~~~~~~~~~~vi~~~S 220 (361)
T PRK00950 147 DVDSVLNAITE-----KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVE-FAEYDYTPLALEYDNLIIGRT 220 (361)
T ss_pred CHHHHHHHhcc-----CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhh-hCccchHHHHHhcCCEEEEEe
Confidence 89999888754 366777766666 99999987765 5888999999999964 221 0111 11222366779
Q ss_pred cccCCCCCCCc--eEEEEEeCCCc
Q 035915 312 LDNTQNAQPSK--ITCLLIRKKSF 333 (344)
Q Consensus 312 ~HK~l~G~P~G--iG~L~Vr~~~~ 333 (344)
+-|. ||.| | +|.++..++..
T Consensus 221 ~SK~-~g~~-GlRiG~~~~~~~~~ 242 (361)
T PRK00950 221 FSKV-FGLA-GLRIGYGFVPEWLI 242 (361)
T ss_pred ehHh-hcCc-hhhcchhcCCHHHH
Confidence 9999 8856 6 78887766544
No 123
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.32 E-value=4.1e-11 Score=121.18 Aligned_cols=159 Identities=12% Similarity=0.034 Sum_probs=114.9
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC--HHHHHHHHHcCCcEEEEE
Q 035915 152 SFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE--LDYVREFASFKESKVILA 228 (344)
Q Consensus 152 ~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~--~~~ir~la~~~G~kV~~v 228 (344)
+......++.++++|++.|+. ..++++|+++|+.+++.++ +++||+++. ...++ ...+.......|+++.++
T Consensus 54 r~~~pt~~~Le~~lA~l~g~~----~~l~~ssG~~Ai~~al~al-~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~ 128 (425)
T PRK06084 54 RIMNPTNDVLEQRVAALEGGV----GALAVASGMAAITYAIQTI-AEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFA 128 (425)
T ss_pred CCCCchHHHHHHHHHHHhCCC----ceeEehhHHHHHHHHHHHH-hCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEE
Confidence 333345678899999999964 2567888889999998877 568998653 44444 222222233457777766
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRP 305 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~ 305 (344)
+.. +.++|++++++ ++++|.+...+| |.++|++.|.+ ||++|+++++|.+|+. |...-.+ .+++
T Consensus 129 d~~------d~e~le~ai~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a~-~~~~~p~-~~ga 195 (425)
T PRK06084 129 AHD------DIAALEALIDE-----RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVAT-PVLCRPF-EHGA 195 (425)
T ss_pred CCC------CHHHHHHHhcc-----CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCcc-cccCChh-hcCC
Confidence 532 56788888865 367777776666 99999987755 6999999999999998 7553333 4789
Q ss_pred cEEEEccccCCCCCCC-ceEEEEEe
Q 035915 306 DFVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
|+++.|++|+ +|+|. .+|..++.
T Consensus 196 Divv~S~tK~-l~G~g~~~gG~v~~ 219 (425)
T PRK06084 196 DIVVHSLTKY-IGGHGTSIGGIVVD 219 (425)
T ss_pred CEEEECchhc-ccccccceeEEEEe
Confidence 9999999999 88774 35766664
No 124
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.32 E-value=5.9e-11 Score=113.74 Aligned_cols=160 Identities=11% Similarity=0.086 Sum_probs=110.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
...++.|+.+++++|.+ + .|++|+|+++.+ .++.++ +++|+.|+ ....|... + ..++..|++++.++.
T Consensus 61 ~~~~~l~~~la~~~~~~-~--~i~~~~G~~~~~-~~l~~~-~~~gd~v~~~~~~~~~~-~-~~~~~~g~~~~~~~~---- 129 (360)
T TIGR00858 61 PLHEELEEELAEWKGTE-A--ALLFSSGYLANV-GVISAL-VGKGDLILSDALNHASL-I-DGCRLSGARVRRYRH---- 129 (360)
T ss_pred HHHHHHHHHHHHHhCCC-C--EEEECchHHHHH-HHHHHh-CCCCCEEEEEccccHHH-H-HHHHhcCCceEEecC----
Confidence 45688999999999963 3 688887755444 455655 57899865 44444422 2 223446888877663
Q ss_pred CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCC---------CCC
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLN---------LAL 302 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LD---------Ls~ 302 (344)
++.++|++.++... ..+++++.+..++| |.+.|+++|.+ |+++|+++++|.+|+. |..+.+ +..
T Consensus 130 --~d~~~l~~~~~~~~-~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~ 205 (360)
T TIGR00858 130 --NDVEHLERLLEKNR-GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGT-GVLGEDGRGTLEHFGLKP 205 (360)
T ss_pred --CCHHHHHHHHHHcc-cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccc-cCcCCCCCchHHhcCCCc
Confidence 35678888876421 02367888777665 99999987765 6999999999999987 754322 222
Q ss_pred CCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 303 HRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
.+.|+++.|++|+ || +.| |+++.+++..
T Consensus 206 ~~~~i~i~s~sK~-~~-~~g-G~~~~~~~~~ 233 (360)
T TIGR00858 206 EPVDIQVGTLSKA-LG-SYG-AYVAGSQALI 233 (360)
T ss_pred cCCcEEEEechhh-hh-ccC-cEEEcCHHHH
Confidence 3679999999999 88 557 8877765543
No 125
>PRK07908 hypothetical protein; Provisional
Probab=99.32 E-value=2.6e-11 Score=117.74 Aligned_cols=156 Identities=14% Similarity=0.065 Sum_probs=108.3
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcC-HHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEE-LDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~-~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
..+.|+.|++++|++++ +|++|+|+++++.+++. + .+|+.++. ++ .......++..|.+++.+|.+.. ..
T Consensus 60 ~~~lr~aia~~~~~~~~--~I~it~Ga~~al~~~~~-l--~~~~viv~---~P~y~~~~~~~~~~G~~i~~v~~~~~-~~ 130 (349)
T PRK07908 60 ERRARAAVAARHGRTPD--EVLLLAGAAEGFALLAR-L--RPRRAAVV---HPSFTEPEAALRAAGIPVHRVVLDPP-FR 130 (349)
T ss_pred hHHHHHHHHHHhCcChh--hEEECCCHHHHHHHHHh-c--CCCeEEEe---CCCChHHHHHHHHcCCEEEeeccCcc-cC
Confidence 56799999999999876 79999999999999887 3 56655443 34 11123445667999999988742 45
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHhCCcEEEeccccc--CcCCccCCCCCCC-CcEEEE-
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHRNSWHVLLDATAL--VVGEDRLNLALHR-PDFVLC- 310 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~g~~vlvDAaQa--~~G~~~LDLs~l~-~DFvv~- 310 (344)
++.+.+ .+ +++++.++..+| |.++|.++|.++.+++.++++|.++. + ...+.++.... .+++++
T Consensus 131 ~d~~~l----~~-----~~~~i~l~np~NPTG~~~~~~~l~~l~~~~~~iIvDe~y~~~~-~~~~~~l~~~~~~~~i~i~ 200 (349)
T PRK07908 131 LDPAAV----PD-----DADLVVIGNPTNPTSVLHPAEQLLALRRPGRILVVDEAFADAV-PGEPESLAGDDLPGVLVLR 200 (349)
T ss_pred cChhHh----cc-----CCCEEEEcCCCCCCCCCcCHHHHHHHHhcCCEEEEECcchhhc-cCCccccccccCCCEEEEe
Confidence 666533 22 367888876666 99999988876544688899999985 2 22234443222 245555
Q ss_pred ccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 311 NLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 311 S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
|++|. ||.| | +|+++++++..+
T Consensus 201 S~SK~-~~l~-GlRiG~~~~~~~~~~ 224 (349)
T PRK07908 201 SLTKT-WSLA-GLRVGYALGAPDVLA 224 (349)
T ss_pred ecccc-cCCc-cceeeeeecCHHHHH
Confidence 99998 8734 5 699998776554
No 126
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.31 E-value=6e-11 Score=115.83 Aligned_cols=158 Identities=13% Similarity=0.059 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCC-c
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLDL-R 236 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g-~ 236 (344)
..+.|+.||+++|++++ +|++|+|+++++.+++..+ .+|+.++..-. ...+...++..|++++.+|.+..++ .
T Consensus 57 ~~~lr~~ia~~~~~~~~--~i~it~Ga~~~l~~~~~~l--~~g~viv~~P~--y~~~~~~~~~~g~~~~~v~~~~~~~~~ 130 (356)
T PRK08056 57 YRHLHQALARHHQVPAS--WILAGNGETESIFAVVSGL--KPRRAMIVTPG--FAEYRRALQQVGCEIRRYSLREADGWQ 130 (356)
T ss_pred HHHHHHHHHHHhCcChh--hEEECCCHHHHHHHHHHHh--CCCCEEEeCCC--cHHHHHHHHHcCCeEEEEecccccCCC
Confidence 57899999999999886 7999999999999998876 46766553222 2224455667799999998764322 3
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccH---HHHH-HHHhCCcEEEeccccc--Cc-C--CccCCCCCCCC
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSM---HWIS-EAHRNSWHVLLDATAL--VV-G--EDRLNLALHRP 305 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl---~~Ia-~ar~~g~~vlvDAaQa--~~-G--~~~LDLs~l~~ 305 (344)
++ +++.+.+.+ +++++.++..+| |..++. +.|. .++++++++++|.+-. .. + ..++ +...+.
T Consensus 131 ~~-~~~~~~~~~-----~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~ 203 (356)
T PRK08056 131 LT-DAILEALTP-----DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ-LADNPH 203 (356)
T ss_pred cc-HHHHHhccC-----CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH-hccCCC
Confidence 33 345454543 467888876666 999994 4443 4688999999999831 10 1 1121 334557
Q ss_pred cEEEEccccCCCCCCC-ceEEEEEe
Q 035915 306 DFVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
++++.|++|+ ||.|. .+|.++..
T Consensus 204 ~i~~~S~SK~-~~~~G~RiG~~v~~ 227 (356)
T PRK08056 204 LWVLRSLTKF-YAIPGLRLGYLVNS 227 (356)
T ss_pred EEEEEechhh-ccCcchhheeeecC
Confidence 8999999999 88552 48888774
No 127
>PRK08960 hypothetical protein; Provisional
Probab=99.31 E-value=4.3e-11 Score=118.00 Aligned_cols=165 Identities=16% Similarity=0.158 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHCG------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~Lg------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.||++++ ++++ +|++|+|+++|+++++..+ +.+||.++ ...+|+.. ...+...|.+++.+|+
T Consensus 71 ~~~lr~~ia~~~~~~~g~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~~~--~~~~~~~g~~~~~v~~ 145 (387)
T PRK08960 71 LPALREAIAGFYAQRYGVDVDPE--RILVTPGGSGALLLASSLL-VDPGKHWLLADPGYPCN--RHFLRLVEGAAQLVPV 145 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCChh--hEEEccCcHHHHHHHHHHh-cCCCCEEEEcCCCCcch--HHHHHhcCCeEEEEec
Confidence 4668888898873 6665 7999999999999999888 67899864 45555521 2233445889988888
Q ss_pred CCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCc--CCccCCCC
Q 035915 231 AWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVV--GEDRLNLA 301 (344)
Q Consensus 231 ~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~--G~~~LDLs 301 (344)
+.. +..++.++|++.+++ +++++.++.-+| |.++|.+.+.+ |+++|+++++|-+..-. +.....+.
T Consensus 146 ~~~~~~~~d~~~l~~~~~~-----~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~~~ 220 (387)
T PRK08960 146 GPDSRYQLTPALVERHWNA-----DTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAASVL 220 (387)
T ss_pred CcccCCCCCHHHHHHHhCc-----cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCChh
Confidence 643 235788899888765 356777766666 99999865432 58899999999975320 11111222
Q ss_pred CCCCc-EEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 302 LHRPD-FVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 302 ~l~~D-Fvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
....+ +++.|+.|. ||.| | +|.++..++..+
T Consensus 221 ~~~~~vi~~~S~SK~-~g~~-GlRiG~~~~~~~~~~ 254 (387)
T PRK08960 221 EVDDDAFVLNSFSKY-FGMT-GWRLGWLVAPPAAVP 254 (387)
T ss_pred hccCCEEEEeecccc-cCCc-ccEEEEEEcCHHHHH
Confidence 22233 788999999 8855 7 999998766544
No 128
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.30 E-value=8.7e-11 Score=116.36 Aligned_cols=165 Identities=12% Similarity=0.098 Sum_probs=117.8
Q ss_pred HHHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 157 PEIQARNKVLKHCG------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 157 ~le~AR~~IA~~Lg------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
.....|+.|+++++ ++++ +|++|+|+|+++++++.++ ..+|+.++ +...+. .+...++..|++++.+|
T Consensus 74 g~~~lr~~ia~~l~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vli~~p~~~--~~~~~~~~~g~~v~~v~ 148 (394)
T PRK06836 74 GYPEVREAIAESLNRRFGTPLTAD--HIVMTCGAAGALNVALKAI-LNPGDEVIVFAPYFV--EYRFYVDNHGGKLVVVP 148 (394)
T ss_pred CCHHHHHHHHHHHHHHhCCCCCcC--cEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCc--cHHHHHHHcCCEEEEEe
Confidence 35678888888885 4555 7999999999999999887 57888865 333322 13444566799999999
Q ss_pred CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH----HHh------CCcEEEecccccCc---C
Q 035915 230 EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE----AHR------NSWHVLLDATALVV---G 294 (344)
Q Consensus 230 ~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~------~g~~vlvDAaQa~~---G 294 (344)
.+..++.++.++|++++++ ++++|.+++.+| |..+|.+.+.+ +++ +++++++|.+..-. +
T Consensus 149 ~~~~~~~~d~~~l~~~~~~-----~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~ 223 (394)
T PRK06836 149 TDTDTFQPDLDALEAAITP-----KTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDG 223 (394)
T ss_pred cCCccCcCCHHHHHhhcCc-----CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCC
Confidence 8754356899999998864 477888887676 99999865542 466 79999999987520 1
Q ss_pred CccCC-CCCCCCcEEEEccccCCCCCCC-ceEEEEEeCCC
Q 035915 295 EDRLN-LALHRPDFVLCNLDNTQNAQPS-KITCLLIRKKS 332 (344)
Q Consensus 295 ~~~LD-Ls~l~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~ 332 (344)
..... ++..+-.+++.|+-|. ||.|. ++|++++.+..
T Consensus 224 ~~~~~~~~~~~~~i~~~S~SK~-~~~pGlRiG~~~~~~~~ 262 (394)
T PRK06836 224 AEVPYIFKYYDNSIVVYSFSKS-LSLPGERIGYIAVNPEM 262 (394)
T ss_pred CCCCChHHccCcEEEEecchhh-ccCcceeeEEEecCHHH
Confidence 11111 1223346889999998 88672 48999887654
No 129
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.29 E-value=1.1e-10 Score=116.09 Aligned_cols=159 Identities=11% Similarity=-0.042 Sum_probs=113.2
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEE
Q 035915 152 SFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILA 228 (344)
Q Consensus 152 ~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~v 228 (344)
+.......+.++++|++.|+.. .+ +++|++.++.++.. + +++||+++ +...|. ...+..++.+.|++++.+
T Consensus 46 r~~~p~~~~Le~~lA~l~g~~~---~~-~~~sG~aai~~~~~-~-l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v 119 (377)
T PRK07671 46 RTGNPTRAALEELIAVLEGGHA---GF-AFGSGMAAITAVMM-L-FSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFV 119 (377)
T ss_pred CCCChHHHHHHHHHHHHhCCCc---eE-EeCCHHHHHHHHHH-H-hCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEE
Confidence 3444457889999999999852 34 46666778876653 2 46899865 444454 223344556679999888
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRP 305 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~ 305 (344)
+.. +.+++++++++ +|++|.+...+| |.+.|++.|.+ ++++|+++++|.+++. +...-.+ .+++
T Consensus 120 ~~~------d~~~l~~ai~~-----~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~~~-~~~~~p~-~~g~ 186 (377)
T PRK07671 120 DTS------NLEEVEEAIRP-----NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTFMT-PYWQSPI-SLGA 186 (377)
T ss_pred CCC------CHHHHHHhcCC-----CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCCc-cccCChh-hhCC
Confidence 642 56788888865 478888876666 99999988865 6999999999999986 5432222 3689
Q ss_pred cEEEEccccCCCCCCCc--eEEEEEeC
Q 035915 306 DFVLCNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
|++++|++|| +|+|.+ .|++++++
T Consensus 187 Divv~S~sK~-l~G~~~~~~G~~v~~~ 212 (377)
T PRK07671 187 DIVLHSATKY-LGGHSDVVAGLVVVNS 212 (377)
T ss_pred eEEEecCccc-ccCCccceeEEEEeCc
Confidence 9999999999 988864 45566554
No 130
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.29 E-value=7.5e-11 Score=114.32 Aligned_cols=174 Identities=8% Similarity=0.037 Sum_probs=134.7
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 153 FISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 153 ~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
..-..+++.++-+-..|.... .+..+|..++|.|+..++-.+ +.+||.++ ...+-=..-+...+++.|++|.+++.+
T Consensus 47 e~~qIm~~v~egikyVFkT~n-~~tf~isgsGh~g~E~al~N~-lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~ 124 (385)
T KOG2862|consen 47 EFVQIMDEVLEGIKYVFKTAN-AQTFVISGSGHSGWEAALVNL-LEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEAD 124 (385)
T ss_pred HHHHHHHHHHHHHHHHhccCC-CceEEEecCCcchHHHHHHhh-cCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecC
Confidence 334456777777877787653 357899999999998877665 46899864 333311112334567889999999888
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc--ccccccH-HHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcE
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI--NGTRYSM-HWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDF 307 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS--NG~i~Pl-~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DF 307 (344)
+ +..+..+.+.+.|... +.++|.++|.. +|+.+|+ +.+.+ +|+++++++||++.++ |-.++-+++|++|+
T Consensus 125 ~-G~~~~le~i~~~lsqh----~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSl-ggt~F~mDewgVDv 198 (385)
T KOG2862|consen 125 I-GQAVPLEEITEKLSQH----KPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASL-GGTEFEMDEWGVDV 198 (385)
T ss_pred c-ccCccHHHHHHHHHhc----CCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhc-CCccceehhhcccE
Confidence 7 4678899999999863 46788887764 4999997 55554 5999999999999999 99999999999999
Q ss_pred EEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 308 VLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 308 vv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
......|. +|+|.|++.+-.++.+.+.
T Consensus 199 aytgSQKa-L~aP~GLsiisfS~ka~~~ 225 (385)
T KOG2862|consen 199 AYTGSQKA-LGAPAGLSIISFSDKALEA 225 (385)
T ss_pred EEecchhh-cCCCCCcceeecCHHHHHH
Confidence 99999999 9999999998777766544
No 131
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.29 E-value=3.7e-11 Score=118.55 Aligned_cols=165 Identities=16% Similarity=0.100 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.+|+++ | ++++ +|++|+|+|+|+.+++.++ ..+|+.++ ....|.. +...+...|++++.+|.
T Consensus 72 ~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~g~~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~ 146 (391)
T PRK08361 72 IPELREAIAEYYKKFYGVDVDVD--NVIVTAGAYEATYLAFESL-LEEGDEVIIPDPAFVC--YVEDAKIAEAKPIRIPL 146 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCcc--cEEEeCChHHHHHHHHHHh-cCCCCEEEEcCCCCcc--cHHHHHHcCCEEEEEec
Confidence 345777777776 3 5665 7999999999999999887 56888754 4444432 22334557999999988
Q ss_pred CCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc---HHHHH-HHHhCCcEEEecccccCc---CCccCCC
Q 035915 231 AWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS---MHWIS-EAHRNSWHVLLDATALVV---GEDRLNL 300 (344)
Q Consensus 231 ~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P---l~~Ia-~ar~~g~~vlvDAaQa~~---G~~~LDL 300 (344)
+.. +..++.++|++.+++ +++++.++..+| |..+| +++|. .++++++++++|.+..-. +.....+
T Consensus 147 ~~~~~~~~d~~~l~~~i~~-----~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 221 (391)
T PRK08361 147 REENEFQPDPDELLELITK-----RTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPM 221 (391)
T ss_pred CCccCCCCCHHHHHHhccc-----ccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCH
Confidence 643 235889999888865 367787776666 99999 44443 468899999999886430 1111122
Q ss_pred CC--CCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 301 AL--HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 301 s~--l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.. .+.++++.|++|. ||.| | +|++++.++..+
T Consensus 222 ~~~~~~~~i~~~s~SK~-~~~~-GlRiG~~~~~~~~~~ 257 (391)
T PRK08361 222 IKYAPDNTILANSFSKT-FAMT-GWRLGFVIAPEQVIK 257 (391)
T ss_pred hhcCCCCEEEEecCchh-cCCc-HhhhhhhccCHHHHH
Confidence 11 2467899999998 8866 8 899998766544
No 132
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.29 E-value=1.6e-10 Score=112.70 Aligned_cols=163 Identities=12% Similarity=0.043 Sum_probs=112.8
Q ss_pred HHHHHHHHHH----cC--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 159 IQARNKVLKH----CG--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 159 e~AR~~IA~~----Lg--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+.|+.++++ +| ++++ +|++|+|+++|+.+++..+ +.+||.++ ..-.|.. ....++..|++++.+|.+
T Consensus 64 ~~lr~~la~~~~~~~~~~~~~~--~i~~t~g~~~al~~~~~~l-~~~gd~vl~~~p~y~~--~~~~~~~~g~~~~~v~~~ 138 (382)
T PRK06108 64 PELREALARYVSRLHGVATPPE--RIAVTSSGVQALMLAAQAL-VGPGDEVVAVTPLWPN--LVAAPKILGARVVCVPLD 138 (382)
T ss_pred HHHHHHHHHHHHHHhCCCcCcc--eEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCccc--hHHHHHHCCCEEEEeeCC
Confidence 3456666655 47 5555 7999999999999998877 56888854 4444441 233445679999999986
Q ss_pred CC--CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHH---H-HHHhCCcEEEecccccCcCCcc------
Q 035915 232 WL--DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWI---S-EAHRNSWHVLLDATALVVGEDR------ 297 (344)
Q Consensus 232 ~~--~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~I---a-~ar~~g~~vlvDAaQa~~G~~~------ 297 (344)
.. +..++.++|++.+++ +++++.++..+| |.++|.+.+ . .++++|+++++|.++.- ....
T Consensus 139 ~~~~~~~~d~~~l~~~~~~-----~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~-~~~~~~~~~~ 212 (382)
T PRK06108 139 FGGGGWTLDLDRLLAAITP-----RTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYER-LYYAPGGRAP 212 (382)
T ss_pred CCCCCccCCHHHHHHhcCc-----cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhh-hccCCCCCCC
Confidence 42 234788899888754 367777776666 999987443 2 35889999999998764 2211
Q ss_pred --CCCCC-CCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 298 --LNLAL-HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 298 --LDLs~-l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+++.. .+-.+++.|++|. ||.| | +|++++++++.+
T Consensus 213 ~~~~~~~~~~~~i~~~S~SK~-~g~~-G~RiG~~~~~~~~~~ 252 (382)
T PRK06108 213 SFLDIAEPDDRIIFVNSFSKN-WAMT-GWRLGWLVAPPALGQ 252 (382)
T ss_pred CHhhcCCCcCCEEEEeechhh-ccCc-ccceeeeeCCHHHHH
Confidence 23322 2345889999998 8755 5 899999776544
No 133
>PLN02483 serine palmitoyltransferase
Probab=99.28 E-value=1.1e-10 Score=120.11 Aligned_cols=187 Identities=13% Similarity=0.098 Sum_probs=119.0
Q ss_pred ccchHHHHHHhhccC-CCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCc
Q 035915 132 TQLEPSRLLDILTKK-SSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGE 209 (344)
Q Consensus 132 v~~~~~~L~~~L~gn-ss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH 209 (344)
.+++.+.+...-.+. ++....-.....++.|+++|+++|.+ + .|+|++|....+ .++.++ +.+||+|++ ...|
T Consensus 121 ~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~-~--ai~~~~G~~an~-~~i~al-~~~Gd~Vi~d~~~h 195 (489)
T PLN02483 121 TPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKP-A--AIVFGMGYATNS-TIIPAL-IGKGGLIISDSLNH 195 (489)
T ss_pred HHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCC-c--EEEECCHHHHHH-HHHHHh-CCCCCEEEEcchhh
Confidence 455556666542222 11111123456799999999999963 3 689988755443 445555 678999764 4444
Q ss_pred CHHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhh-------cCCCCCee-EEEEeCccc--cccccHHHHHH-HH
Q 035915 210 ELDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRR-------KCKHTPKG-LFSYPADIN--GTRYSMHWISE-AH 278 (344)
Q Consensus 210 ~~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~-------~~~~~~t~-LVa~~avSN--G~i~Pl~~Ia~-ar 278 (344)
+. +...++..|++++.++.+ +.++|++.++. ++..+.++ +|.+..+.| |.+.+++.|.+ ++
T Consensus 196 ~s--~~~~~~~~Ga~v~~~~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~ 267 (489)
T PLN02483 196 NS--IVNGARGSGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCK 267 (489)
T ss_pred HH--HHHHHHHcCCeEEEEeCC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHH
Confidence 43 333456679999998854 23455544432 11111123 566656644 99999977754 68
Q ss_pred hCCcEEEecccccCcCCcc---------CCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 279 RNSWHVLLDATALVVGEDR---------LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 279 ~~g~~vlvDAaQa~~G~~~---------LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
++|+++++|.+|++ |... +++...++|+++.|++|. || +.| |+++.++++.+.
T Consensus 268 ~~~~~livDEa~s~-g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs-~g-~~G-G~i~~~~~li~~ 329 (489)
T PLN02483 268 KYKAYVYLDEAHSI-GAVGKTGRGVCELLGVDPADVDIMMGTFTKS-FG-SCG-GYIAGSKELIQY 329 (489)
T ss_pred HcCCEEEEECcCcc-CccCCCCCchHHhcCCCcccCcEEEEecchh-cc-cCc-eEEEcCHHHHHH
Confidence 99999999999987 6421 233334689999999999 88 556 888777665443
No 134
>PRK09105 putative aminotransferase; Provisional
Probab=99.28 E-value=9.1e-11 Score=115.80 Aligned_cols=163 Identities=15% Similarity=0.056 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
..+.|+.|++++|++++ +|++|+|+++++.+++.++ ..+||.++ ..-.|.. ....++..|++++.+|.+. +..
T Consensus 80 ~~~Lr~aia~~~~v~~e--~I~it~Gs~~ai~~~~~~l-~~~gd~Vli~~P~y~~--~~~~~~~~g~~~~~v~~~~-~~~ 153 (370)
T PRK09105 80 EDDLRTLFAAQEGLPAD--HVMAYAGSSEPLNYAVLAF-TSPTAGLVTADPTYEA--GWRAADAQGAPVAKVPLRA-DGA 153 (370)
T ss_pred HHHHHHHHHHHhCcChh--hEEEcCChHHHHHHHHHHH-cCCCCEEEEeCCChHH--HHHHHHHcCCeEEEecCCC-CCC
Confidence 66789999999999876 7999999999999999888 46788864 4443332 2344666799999998864 456
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHH---HhCCcEEEecccccCcCCcc--CCCCCCCCcEEE
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEA---HRNSWHVLLDATALVVGEDR--LNLALHRPDFVL 309 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~a---r~~g~~vlvDAaQa~~G~~~--LDLs~l~~DFvv 309 (344)
++.+++.+. .+ +++++.++.-+| |.++|.+++.++ +++++++++|.+..-.+..+ +++.+...++++
T Consensus 154 ~d~~~l~~~-~~-----~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~ 227 (370)
T PRK09105 154 HDVKAMLAA-DP-----NAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIV 227 (370)
T ss_pred CCHHHHHhc-CC-----CCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEE
Confidence 788877654 22 366777766666 999999877654 23589999999874212111 333333556555
Q ss_pred -EccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 310 -CNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 310 -~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.|+-|. ||.| | +|+++..+++.+
T Consensus 228 ~~SfSK~-~g~~-GlRiG~~v~~~~~i~ 253 (370)
T PRK09105 228 LRTFSKL-YGMA-GMRLGLAAARPDLLA 253 (370)
T ss_pred EecccHh-hcCC-ccceeeeecCHHHHH
Confidence 588898 8855 7 999998765544
No 135
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.28 E-value=2.5e-10 Score=112.94 Aligned_cols=170 Identities=11% Similarity=0.032 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHHHcCCCCC-CCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCC
Q 035915 155 SIPEIQARNKVLKHCGLPDD-EYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~-ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~ 232 (344)
....+..++.+++++|+..+ ..+|+||+|+++++.+++.++ +.+||.++ +.-.+... ...++..|++++.+|.+.
T Consensus 68 ~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~P~y~~~--~~~~~~~g~~~~~v~~~~ 144 (389)
T PRK05957 68 PPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAI-TDPGDEIILNTPYYFNH--EMAITMAGCQPILVPTDD 144 (389)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCCcCH--HHHHHhcCCEEEEeecCC
Confidence 34568888899999997522 237999999999999888877 57899865 33333311 122345699999999864
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc---HHHH-HHHHhCCcEEEecccccCc-----CCcc-CCC
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS---MHWI-SEAHRNSWHVLLDATALVV-----GEDR-LNL 300 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P---l~~I-a~ar~~g~~vlvDAaQa~~-----G~~~-LDL 300 (344)
+..++.++|++.+++ +++++.+++.+| |.++| ++.| +.|+++|+++++|.+..-. .+.+ ..+
T Consensus 145 -~~~~d~~~l~~~i~~-----~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~ 218 (389)
T PRK05957 145 -NYQLQPEAIEQAITP-----KTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSI 218 (389)
T ss_pred -CCCcCHHHHHHhcCc-----CceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhC
Confidence 456899999998864 467888877666 99999 4444 3468899999999985410 1111 111
Q ss_pred -CCCCCcEEEEccccCCCCCCCc--eEEEEEeCCCccc
Q 035915 301 -ALHRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFDT 335 (344)
Q Consensus 301 -s~l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~~ 335 (344)
....--+++.|+=|. ||.| | +|++++.+++.+.
T Consensus 219 ~~~~~~~i~~~S~SK~-~g~~-GlRiG~~~~~~~~~~~ 254 (389)
T PRK05957 219 PGSGNHTISLYSLSKA-YGFA-SWRIGYMVIPIHLLEA 254 (389)
T ss_pred CCccCcEEEEecchhh-ccCc-cceeEEEecCHHHHHH
Confidence 111223677788898 8855 7 9999987665443
No 136
>PLN02590 probable tyrosine decarboxylase
Probab=99.27 E-value=3e-10 Score=118.35 Aligned_cols=178 Identities=10% Similarity=-0.008 Sum_probs=118.7
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCC-----CCeEEEeCCHHHHHHHHH---hhCCCC----CC--CeEE--EcCCcCHHH
Q 035915 150 PGSFISIPEIQARNKVLKHCGLPDD-----EYLVLFTPNYRDAMMLVG---ESYPFF----RG--NFYM--TIIGEELDY 213 (344)
Q Consensus 150 ~g~~as~~le~AR~~IA~~Lga~p~-----ey~VVFTsnaTeAlnlva---~sl~~~----~G--d~iv--S~~eH~~~~ 213 (344)
.+..++....++-+.+++++|.+.. ...=+||+|+|+|+.+.+ +-...+ .+ ..++ |..-|. +
T Consensus 164 ~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~--S 241 (539)
T PLN02590 164 TSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHS--S 241 (539)
T ss_pred cCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchH--H
Confidence 3444556778999999999998742 124789999999875432 211010 11 1222 333343 3
Q ss_pred HHHHHHcCCc---EEEEEeCCCC-CCccCHHHHHHHhhhcCCCC-CeeEEEEeCcc-c-cccccHHHHHH-HHhCCcEEE
Q 035915 214 VREFASFKES---KVILAPEAWL-DLRIKGSQLSQYFRRKCKHT-PKGLFSYPADI-N-GTRYSMHWISE-AHRNSWHVL 285 (344)
Q Consensus 214 ir~la~~~G~---kV~~vp~~~~-~g~i~~~~L~~~l~~~~~~~-~t~LVa~~avS-N-G~i~Pl~~Ia~-ar~~g~~vl 285 (344)
+...|.-.|+ .|+.+|.+.. +++++.+.|++.+....... .+-+|+.++-+ + |.+=||+.|+. |+++|+++|
T Consensus 242 v~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlH 321 (539)
T PLN02590 242 FRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLH 321 (539)
T ss_pred HHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEE
Confidence 5555555666 5888898742 46899999999986432111 12344444433 3 99999998876 699999999
Q ss_pred ecccccCcCCccCC-----C-CCCCCcEEEEccccCCCCCCCceEEEEEeCC
Q 035915 286 LDATALVVGEDRLN-----L-ALHRPDFVLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 286 vDAaQa~~G~~~LD-----L-s~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
||||-.- .....+ + .-..+|-+++++||| ++.|.++|+|++|+.
T Consensus 322 VDaA~GG-~al~~~~~r~~~~Gie~ADSit~D~HK~-l~~p~~cg~llvr~~ 371 (539)
T PLN02590 322 VDAAYAG-NACICPEYRKFIDGIENADSFNMNAHKW-LFANQTCSPLWVKDR 371 (539)
T ss_pred Eecchhh-hhhcChhhHHHhcCCccCCEEEECchhh-cCcCcCEEEEEecCH
Confidence 9998775 332211 1 113589999999999 777999999999975
No 137
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.26 E-value=1.8e-10 Score=112.37 Aligned_cols=162 Identities=15% Similarity=0.085 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
...++.++.+++++|++ + .|++|+| ++++..+..++ +.+||+|+ ....|+.. ...++..|.++..++.
T Consensus 87 ~l~~~l~~~la~~~g~~-~--~i~~tsG-~~a~~~~~~~l-~~~gd~vi~~~~~~~~~--~~~~~~~~~~~~~~~~---- 155 (397)
T PRK06939 87 DLHKELEEKLAKFLGTE-D--AILYSSC-FDANGGLFETL-LGKEDAIISDALNHASI--IDGVRLCKAKRYRYAN---- 155 (397)
T ss_pred HHHHHHHHHHHHHhCCC-c--EEEEcCh-HHHHHHHHHHh-CCCCCEEEEEhhhhHHH--HHHHHhcCCceEEeCC----
Confidence 45688899999999975 3 6888888 77877777766 67899865 45555532 1223334677666653
Q ss_pred CccCHHHHHHHhhhcC-CCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccC---------CCC
Q 035915 235 LRIKGSQLSQYFRRKC-KHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRL---------NLA 301 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~-~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~L---------DLs 301 (344)
.+.+++++.+++.. ...+++++...++.| |...+++.|.+ |+++|+++++|.+|+. |.... ++.
T Consensus 156 --~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~-g~~~~~~~~~~~~~~~~ 232 (397)
T PRK06939 156 --NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAV-GFVGENGRGTVEHFGVM 232 (397)
T ss_pred --CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccc-cCcCCCCCCHHHHcCCC
Confidence 25667777765311 012467777765554 99999987764 7999999999999976 64321 221
Q ss_pred CCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 302 LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 302 ~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
.++|++++|++|+ |+++. +|+++++++..+
T Consensus 233 -~~~~i~~~S~sK~-~~g~r-~G~v~~~~~~~~ 262 (397)
T PRK06939 233 -DRVDIITGTLGKA-LGGAS-GGYTAGRKEVID 262 (397)
T ss_pred -CCCcEEEEECHHH-hCccC-ceEEEeCHHHHH
Confidence 2579999999999 86564 599888766544
No 138
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.25 E-value=5e-10 Score=114.18 Aligned_cols=171 Identities=10% Similarity=0.016 Sum_probs=118.7
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHH-HHHHHHHhhCCCC--CCCeE-EEcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYR-DAMMLVGESYPFF--RGNFY-MTIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaT-eAlnlva~sl~~~--~Gd~i-vS~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
.....++..+.+++++|++.-. ..++++++| .++-+++.++... +|+++ ++...|.+ ...-+...|++.+.+|
T Consensus 103 ~~~l~~~~e~~~~~~~G~~~~~-~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S--~~kAi~~~G~~pv~Vd 179 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLRSIK-SAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKS--CIKAISTAGFEPRVIE 179 (444)
T ss_pred HHHHHHHHHHHHHHHcCCCCCC-EEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHH--HHHHHHHcCCeEEEee
Confidence 3445688888899999996432 589999999 5777777776542 57875 46666542 1222344699998888
Q ss_pred C--CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc---cccccHHHHHH-HHhCCcEEEecccccCcCCccC-CC--
Q 035915 230 E--AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN---GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRL-NL-- 300 (344)
Q Consensus 230 ~--~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN---G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~L-DL-- 300 (344)
. +..+..++.++|++++++.. .++.++.+...++ |..-|++.|++ |+++|+++|+|+|++. +...+ ++
T Consensus 180 ~~~d~~~~~iD~e~Le~aIt~~~--~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~-~~~~~~~~~~ 256 (444)
T TIGR03531 180 TVLDGDELTTDVEDIERAIEEIG--PDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGL-QSNKYMELIN 256 (444)
T ss_pred eeecCcCCCcCHHHHHHHHHhcc--CCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcC-cChhhhhhhh
Confidence 3 44457889999999998531 1234444443333 57889988865 6999999999999998 65331 11
Q ss_pred C--CC-CCcEEEEccccCCCCCCCceEEEEEeCC
Q 035915 301 A--LH-RPDFVLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 301 s--~l-~~DFvv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
. .. .+|.+++|+||+ +..|.+-|+++++++
T Consensus 257 ~g~~~Grad~vv~s~hK~-l~~pg~Gg~I~~~d~ 289 (444)
T TIGR03531 257 KAIKVGRVDAVVSSTDKN-FMVPVGGAIIYSFDE 289 (444)
T ss_pred ccccccCCCeEEEeCccC-CCCCCCEEEEEECCH
Confidence 1 12 479999999999 777878777777543
No 139
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.24 E-value=3.4e-10 Score=114.92 Aligned_cols=160 Identities=9% Similarity=0.057 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC--------CCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEE
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY--------PFFRGNFYM-TIIGEELDYVREFASFKESKVILA 228 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl--------~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~v 228 (344)
..+-++++|+++|++ .+++|+|+|+|+.+++.++ .+.+||+|+ ....|... . ......|++++.+
T Consensus 65 ~~~fe~~lA~~~g~~----~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~-~-~~v~~~G~~pv~v 138 (438)
T PRK15407 65 NDAFEKKLAEFLGVR----YALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTT-V-NPIIQNGLVPVFV 138 (438)
T ss_pred HHHHHHHHHHHhCCC----eEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHH-H-HHHHHcCCEEEEE
Confidence 567889999999984 4899999999999888765 567899865 56666522 1 1123468999888
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccccCcCCccCC--CCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLN--LALHRP 305 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LD--Ls~l~~ 305 (344)
+++..+..++.+++++.+++ ++++|.+.+. .|...+++.|.+ |+++|+++++|++|++ |...-+ +..++
T Consensus 139 dvd~~~~~id~~~le~~i~~-----~tkaVi~~~~-~G~p~dl~~I~~la~~~gi~vIeDaa~a~-G~~~~g~~~G~~g- 210 (438)
T PRK15407 139 DVELPTYNIDASLLEAAVSP-----KTKAIMIAHT-LGNPFDLAAVKAFCDKHNLWLIEDNCDAL-GSTYDGRMTGTFG- 210 (438)
T ss_pred ecCCCcCCcCHHHHHHHcCc-----CCeEEEEeCC-CCChhhHHHHHHHHHHCCCEEEEECccch-hhhcCCeeeeccC-
Confidence 88754567899999998865 4677777653 588889977754 6999999999999999 976544 33344
Q ss_pred cEEEEcccc--CCCCCCCceEEEEEeCCCc
Q 035915 306 DFVLCNLDN--TQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 306 DFvv~S~HK--~l~G~P~GiG~L~Vr~~~~ 333 (344)
|+.+||+|. .+-.++ | |+|+.+++.+
T Consensus 211 d~~~fSf~~~k~~~~ge-G-G~l~t~d~~l 238 (438)
T PRK15407 211 DIATLSFYPAHHITMGE-G-GAVFTNDPLL 238 (438)
T ss_pred ceEEEeCCCCCCccccC-c-eEEEECCHHH
Confidence 999999985 223334 5 8888876544
No 140
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.24 E-value=4.1e-10 Score=109.27 Aligned_cols=159 Identities=14% Similarity=0.120 Sum_probs=105.9
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCC
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~ 233 (344)
....++.|+.+++++|. ++ .|+++ ++++++..++..+ +++|+.|+ ....|... + ..++..|++++.+|..
T Consensus 83 ~~~~~~l~~~la~~~~~-~~--~i~~~-~g~~~~~~~l~~~-~~~gd~V~~~~~~~~~~-~-~~~~~~g~~~~~~~~~-- 153 (385)
T PRK05958 83 SPAHEALEEELAEWFGA-ER--ALLFS-SGYAANLAVLTAL-AGKGDLIVSDKLNHASL-I-DGARLSRARVRRYPHN-- 153 (385)
T ss_pred cHHHHHHHHHHHHHhCC-Cc--EEEEC-cHHHHHHHHHHHh-CCCCCEEEEeCccCHHH-H-HHHHhcCCceEEeCCC--
Confidence 34568899999999995 23 35554 5566655555555 57899865 45555422 1 2233458888777642
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCcc---------CCCC
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDR---------LNLA 301 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~---------LDLs 301 (344)
+.+++++.+++.. ..+.++.+..+.| |.+.|+++|.+ |+++|+++++|.+|+. |... .++.
T Consensus 154 ----d~~~l~~~i~~~~--~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~-g~~~~~g~~~~~~~~~~ 226 (385)
T PRK05958 154 ----DVDALEALLAKWR--AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT-GVLGPQGRGLAAEAGLA 226 (385)
T ss_pred ----CHHHHHHHHHhcc--CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc-cccCCCCCchHHhhCCC
Confidence 5678888886421 1356777665554 99999987765 6999999999999987 6432 1233
Q ss_pred CCCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 302 LHRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 302 ~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
....++++.|++|+ || +.| |+++.+++.
T Consensus 227 ~~~~~i~~~s~sK~-~~-~~G-g~~~~~~~~ 254 (385)
T PRK05958 227 GEPDVILVGTLGKA-LG-SSG-AAVLGSETL 254 (385)
T ss_pred CCCceEEEEechhh-cc-cCC-cEEEcCHHH
Confidence 33445889999999 88 556 777666543
No 141
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.23 E-value=2e-10 Score=111.98 Aligned_cols=166 Identities=10% Similarity=0.102 Sum_probs=119.0
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
..+.|+.||++++++++ +|++|+|+++++++++..+ +.+||.++. .-.+ ..+...++..|++++.++.+. ++.
T Consensus 61 ~~~lr~~ia~~~~~~~~--~i~it~G~~~~l~~~~~~l-~~~gd~Vlv~~p~y--~~~~~~~~~~g~~~~~v~~~~-~~~ 134 (351)
T PRK14807 61 AEKLREELARYCSVVPT--NIFVGNGSDEIIHLIMLAF-INKGDVVIYPHPSF--AMYSVYSKIAGAVEIPVKLKE-DYT 134 (351)
T ss_pred HHHHHHHHHHHhCCCcc--cEEEecCHHHHHHHHHHHh-cCCCCEEEEeCCCh--HHHHHHHHHcCCeEEEeecCC-CCC
Confidence 47789999999999876 7999999999999999887 678998653 2222 224445667899999998874 356
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCc-CCccCC-CCCCCCcEEEEc
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVV-GEDRLN-LALHRPDFVLCN 311 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~-G~~~LD-Ls~l~~DFvv~S 311 (344)
++.+++++.+++. +++++.++..+| |..+|.+++.+ +++.+..+++|.+..-. +....+ +....-.+++.|
T Consensus 135 ~d~~~l~~~~~~~----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S 210 (351)
T PRK14807 135 YDVGSFIKVIEKY----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRT 210 (351)
T ss_pred CCHHHHHHHhhcc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEec
Confidence 8899998888642 467777776666 99999987765 46667789999998521 321112 112233588899
Q ss_pred cccCCCCCCC-ceEEEEEeCCCcc
Q 035915 312 LDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 312 ~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
+-|. ||.|. .+|.++..+++.+
T Consensus 211 ~SK~-~~~~GlRiG~~v~~~~~~~ 233 (351)
T PRK14807 211 LSKA-FGLAGLRVGYAVANENILK 233 (351)
T ss_pred chHh-cccchhceeeeecCHHHHH
Confidence 9999 87552 3788877655443
No 142
>PLN02242 methionine gamma-lyase
Probab=99.23 E-value=1.4e-10 Score=117.10 Aligned_cols=165 Identities=10% Similarity=-0.037 Sum_probs=118.2
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcC-H-HHHH-HHHHcCCcEE
Q 035915 150 PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEE-L-DYVR-EFASFKESKV 225 (344)
Q Consensus 150 ~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~-~-~~ir-~la~~~G~kV 225 (344)
.++......++.++++|+++|+. .+++|+|+++|+.+++.++ +++||+|+.. ..+. . ..+. .+++..|+++
T Consensus 70 Y~r~~~Pt~~~LE~~lA~l~g~~----~~l~~~sG~~Ai~~al~al-~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~ 144 (418)
T PLN02242 70 YSRHFNPTVLNLGRQMAALEGTE----AAYCTASGMSAISSVLLQL-CSSGGHVVASNTLYGGTHALLAHFLPRKCNITT 144 (418)
T ss_pred ccCCCChhHHHHHHHHHHHhCCC----eEEEEccHHHHHHHHHHHH-hCCCCEEEEcCCcHHHHHHHHHHhhhhccCceE
Confidence 34444456788999999999985 3678999999999988887 6789997633 2222 1 1122 2233468887
Q ss_pred EEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCC
Q 035915 226 ILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLAL 302 (344)
Q Consensus 226 ~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~ 302 (344)
+.++.+ +.++|+++++++ ++++|.+...+| |.+.|++.|.+ +|++|+++++|.+++. .. ++...
T Consensus 145 ~~~d~~------d~e~l~~~i~~~----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~-~~--~~~~~ 211 (418)
T PLN02242 145 TFVDIT------DLEAVKKAVVPG----KTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAP-MV--LSPAR 211 (418)
T ss_pred EEcCCC------CHHHHHHhcCcC----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCc-cC--CCHHH
Confidence 766542 567888888642 377888887776 99999987765 6999999999999976 43 34445
Q ss_pred CCCcEEEEccccCCCCCCCc--eEEEEEeCCCc
Q 035915 303 HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSF 333 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~ 333 (344)
+++|+++.|++|+ |+++.. .|+++.++++.
T Consensus 212 ~g~divv~S~SK~-l~g~g~~~gG~iv~~~~li 243 (418)
T PLN02242 212 LGADVVVHSISKF-ISGGADIIAGAVCGPAELV 243 (418)
T ss_pred cCCcEEEEeCccc-cCCCCCceEEEEEcCHHHH
Confidence 6899999999999 886633 47777665543
No 143
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.23 E-value=5e-10 Score=108.98 Aligned_cols=165 Identities=10% Similarity=-0.004 Sum_probs=109.9
Q ss_pred HHHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhhCCCCCC---CeEE-EcCCcCHHHHHHHHHcCCcEEEEE
Q 035915 159 IQARNKVLKHC----GL--PDDEYLVLFTPNYRDAMMLVGESYPFFRG---NFYM-TIIGEELDYVREFASFKESKVILA 228 (344)
Q Consensus 159 e~AR~~IA~~L----ga--~p~ey~VVFTsnaTeAlnlva~sl~~~~G---d~iv-S~~eH~~~~ir~la~~~G~kV~~v 228 (344)
.+.|+.|++++ |. ++++ +|++|+|+++|++++...+. .+| |.|+ ....+.. ....++..|++++.+
T Consensus 39 ~~lr~aia~~~~~~~g~~~~~~~-~Iiit~Gs~~ai~~~~~~~~-~~g~~~d~Vl~~~p~y~~--~~~~~~~~g~~~~~v 114 (350)
T TIGR03537 39 KALREAISGWFERRFGVKLDPDA-QVLPSAGSKEAIFHFPLVFI-DPEEDRRRVIFGTPGYPV--YERGALFAGGEPTAV 114 (350)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCC-cEEEcCChHHHHHHHHHHHc-CCCCCCceEEEcCCCCcc--hHHHHHhcCCEEEEc
Confidence 34566666665 64 4432 69999999999999988773 455 5655 3333331 233345679999999
Q ss_pred eCCCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccH---HHHH-HHHhCCcEEEecccccC--cCCccCC
Q 035915 229 PEAWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSM---HWIS-EAHRNSWHVLLDATALV--VGEDRLN 299 (344)
Q Consensus 229 p~~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl---~~Ia-~ar~~g~~vlvDAaQa~--~G~~~LD 299 (344)
|.+.. +..++.+++++++++ +++++.++.-+| |..+|. +.|. .|+++|+++++|.++.- .+....+
T Consensus 115 ~~~~~~~~~~d~~~l~~~~~~-----~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~ 189 (350)
T TIGR03537 115 KLKKEDGFLLRLEKVEKSILE-----ETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGEPPHS 189 (350)
T ss_pred ccCcccCCccCHHHHHHhhhh-----ccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCc
Confidence 88632 334788999888765 367777776566 999995 4443 35889999999999863 0333333
Q ss_pred CCCCCCc--EEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 300 LALHRPD--FVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 300 Ls~l~~D--Fvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+...+.| +++.|+.|. ||.| | +|+++..+++.+
T Consensus 190 ~~~~~~~~~i~~~s~SK~-~g~~-GlRiG~~~~~~~~~~ 226 (350)
T TIGR03537 190 ALEVGIENVLAFHSLSKR-SGMT-GYRSGFVAGDEKLIS 226 (350)
T ss_pred hhhcCcCCEEEEeecccc-cCCc-cccceeeecCHHHHH
Confidence 3322333 777799999 8866 6 888876554443
No 144
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.23 E-value=3.1e-10 Score=111.51 Aligned_cols=165 Identities=14% Similarity=0.085 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC------GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L------ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.+++++ +++++ +|++|+|+|+|+.+++.++ ..+|+.++ ....|. .+...++..|+++..+|.
T Consensus 70 ~~~lr~~ia~~~~~~~~~~~~~~--~i~~~~g~~~a~~~~~~~~-~~~gd~vl~~~p~y~--~~~~~~~~~g~~~~~~~~ 144 (393)
T PRK05764 70 IPELREAIAAKLKRDNGLDYDPS--QVIVTTGAKQALYNAFMAL-LDPGDEVIIPAPYWV--SYPEMVKLAGGVPVFVPT 144 (393)
T ss_pred hHHHHHHHHHHHHHHhCCCCCHH--HEEEeCCcHHHHHHHHHHh-cCCCCEEEecCCCCc--chHHHHHHcCCEEEEEec
Confidence 466788888887 35554 7999999999999998887 56788754 444443 233445567999999988
Q ss_pred CCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHH---HH-HHHHhCCcEEEecccccCc---CCc----
Q 035915 231 AWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMH---WI-SEAHRNSWHVLLDATALVV---GED---- 296 (344)
Q Consensus 231 ~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~---~I-a~ar~~g~~vlvDAaQa~~---G~~---- 296 (344)
+.. +..++.++|++.+++ +++++.++.-+| |.++|.+ .| ..++++|+++++|.+..-. +..
T Consensus 145 ~~~~~~~~d~~~l~~~l~~-----~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 219 (393)
T PRK05764 145 GEENGFKLTVEQLEAAITP-----KTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSI 219 (393)
T ss_pred CcccCCcCCHHHHHHhhCc-----cceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccH
Confidence 632 235778889888754 367777776666 9999864 33 3468899999999876531 111
Q ss_pred -cCCCCCCCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 297 -RLNLALHRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 297 -~LDLs~l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.++....+.++++.|+-|+ ||.| | +|+++.+++..+
T Consensus 220 ~~~~~~~~~~~i~~~s~SK~-~~~~-G~RiG~i~~~~~~~~ 258 (393)
T PRK05764 220 ASLSPELRDRTITVNGFSKA-YAMT-GWRLGYAAGPKELIK 258 (393)
T ss_pred HHcCCCCcCCEEEEecCccc-ccCc-cceeEEEecCHHHHH
Confidence 1111223467899999999 8755 7 798887765443
No 145
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.21 E-value=1.9e-10 Score=114.60 Aligned_cols=166 Identities=15% Similarity=0.121 Sum_probs=117.3
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhhCCCCCCCeEE--EcCCcCHHHHHHHHHcCCcEEEE
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTP-NYRDAMMLVGESYPFFRGNFYM--TIIGEELDYVREFASFKESKVIL 227 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTs-naTeAlnlva~sl~~~~Gd~iv--S~~eH~~~~ir~la~~~G~kV~~ 227 (344)
+....+.++++++.+.++|+.+ ++|+|+|.+ |+|.++..+..++ +.+|+.++ ...++=..-|...|++.| .|..
T Consensus 44 s~~F~~i~~~~~~~Lr~Ll~~P-~~y~Vlfl~GggT~~~ea~~~Nl-l~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~ 120 (364)
T PRK12462 44 SSWFSSLLAQAEADLRDLLGIP-DEYGVVFLQGGSSLQFSMIPMNF-SRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRV 120 (364)
T ss_pred cHHHHHHHHHHHHHHHHHhCCC-CCCeEEEEeccHHHHHHHHHHHc-CCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceE
Confidence 4455667899999999999994 568888885 5999999988887 45677432 223321333445566666 4554
Q ss_pred EeCCCC---CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHhCCcEEEecccccCcCCccCCCCC
Q 035915 228 APEAWL---DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHRNSWHVLLDATALVVGEDRLNLAL 302 (344)
Q Consensus 228 vp~~~~---~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~g~~vlvDAaQa~~G~~~LDLs~ 302 (344)
+...+. ....+.+++. +.+ ....|.+++..+ |+.+| .+ .+..++++++|++..+ |..|+|+++
T Consensus 121 ~~~~~~~~~~~~p~~~~~~--~~~-----d~~~v~~t~NETstGv~~~--~~--~~~~~~llvvD~sS~~-~s~pid~~~ 188 (364)
T PRK12462 121 VWDGAASGYRTLPSLAELD--WDA-----RAPFRHYVSNETVEGLQFP--DA--AGLPDSPLIADMSSDF-MSRPFDVEA 188 (364)
T ss_pred ecCcCCCCCCcCCCHHHhc--cCC-----CCcEEEEccCCCCceEecC--cc--cccCCCeEEEEcCchh-hCCCCChHH
Confidence 432111 1223444331 111 356788887764 99997 11 1235899999999999 999999998
Q ss_pred CCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 303 HRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+ |.+.++.+|. +| |.|++++++|+++++.
T Consensus 189 ~--dvi~agsQKn-lg-P~Gltvvivs~~al~~ 217 (364)
T PRK12462 189 Y--GMVYAHAQKN-LG-PAGVTVAIIRRALLER 217 (364)
T ss_pred c--cEEEeecccc-CC-CCceEEEEECHHHHhh
Confidence 7 9999999999 88 9999999999998866
No 146
>PRK07337 aminotransferase; Validated
Probab=99.21 E-value=2.7e-10 Score=112.16 Aligned_cols=165 Identities=12% Similarity=0.130 Sum_probs=113.6
Q ss_pred HHHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.+|+++ | ++++ +|++|+|+|+|+++++..+ ..+||.|+ ....|.. ....++..|++++.+|.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~~~~ 143 (388)
T PRK07337 69 LAPLREAIAAWYARRFGLDVAPE--RIVVTAGASAALLLACLAL-VERGDEVLMPDPSYPC--NRHFVAAAEGRPVLVPS 143 (388)
T ss_pred CHHHHHHHHHHHHHHhCCCCChH--hEEEecCcHHHHHHHHHHh-cCCCCEEEEeCCCchh--hHHHHHHcCCEEEEeec
Confidence 456788888876 4 4555 7999999999999999887 57899865 4445442 22334456899999988
Q ss_pred CCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcCCc--cCCCC
Q 035915 231 AWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVGED--RLNLA 301 (344)
Q Consensus 231 ~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~~--~LDLs 301 (344)
+.. +..++.++|++.+++ +++++.++.-+| |..++.+.+. .++++++++++|-+-.-.... +..+.
T Consensus 144 ~~~~~~~~~~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 218 (388)
T PRK07337 144 GPAERFQLTAADVEAAWGE-----RTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPVSAL 218 (388)
T ss_pred CCccCCcCCHHHHHhhcCc-----cceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcChh
Confidence 642 346888999888764 367777766666 9999874443 357899999999664310211 22222
Q ss_pred CCCCcEE-EEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 302 LHRPDFV-LCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 302 ~l~~DFv-v~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.++.+.+ +.|+.|. ||.| | +|++++.+++.+
T Consensus 219 ~~~~~vi~~~S~SK~-~~~~-G~RiG~~~~~~~l~~ 252 (388)
T PRK07337 219 SLGDDVITINSFSKY-FNMT-GWRLGWLVVPEALVG 252 (388)
T ss_pred hccCCEEEEEechhh-cCCc-hhheeeeecCHHHHH
Confidence 3445554 6699999 8756 6 899998765543
No 147
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.21 E-value=1.8e-10 Score=111.96 Aligned_cols=164 Identities=14% Similarity=0.089 Sum_probs=116.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAWLDL 235 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~~g 235 (344)
...+.|+.+|+++|++++ +|+||+|+++++.+++.++ +++|+.++. .-.++ .....+...|+++..+|.+ ++
T Consensus 65 g~~~lr~~ia~~~~~~~~--~i~~t~G~~~~l~~~~~~~-~~~gd~v~~~~p~y~--~~~~~~~~~g~~~~~~~~~--~~ 137 (359)
T PRK03158 65 YAPELRTKVAKHLGVDEE--QLLFGAGLDEVIQMISRAL-LNPGTNTVMAEPTFS--QYRHNAIIEGAEVREVPLK--DG 137 (359)
T ss_pred cHHHHHHHHHHHhCCCHH--HEEECCCHHHHHHHHHHHH-hCCCCEEEEcCCCHH--HHHHHHHHcCCeEEEEecC--CC
Confidence 356789999999999876 7999999999999998887 568888653 32222 2334455679999999986 35
Q ss_pred ccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHh--CCcEEEecccccCc---CCccCCC---CCCC
Q 035915 236 RIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHR--NSWHVLLDATALVV---GEDRLNL---ALHR 304 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~--~g~~vlvDAaQa~~---G~~~LDL---s~l~ 304 (344)
.++.+++++.+++ +++++.+...+| |.++|.+.+.+ ++. +++++++|-+..-. +..+..+ ...+
T Consensus 138 ~~d~~~l~~~~~~-----~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~ 212 (359)
T PRK03158 138 GHDLEAMLKAIDE-----QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYE 212 (359)
T ss_pred CcCHHHHHHhcCC-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcC
Confidence 6788888877754 356777665566 99999977654 443 58999999998530 1111111 1234
Q ss_pred CcEEEEccccCCCCCCCce--EEEEEeCCCcc
Q 035915 305 PDFVLCNLDNTQNAQPSKI--TCLLIRKKSFD 334 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~Gi--G~L~Vr~~~~~ 334 (344)
-.+++.|+-|. ||.| |+ |+++..++..+
T Consensus 213 ~vi~~~S~SK~-~g~~-GlRiG~~v~~~~~~~ 242 (359)
T PRK03158 213 NLIVLRTFSKA-YGLA-ALRVGYGIASEELIE 242 (359)
T ss_pred CEEEEEechHh-hcCc-chhhehhcCCHHHHH
Confidence 56888899999 8855 74 99988766543
No 148
>PRK07324 transaminase; Validated
Probab=99.20 E-value=3.2e-10 Score=111.79 Aligned_cols=166 Identities=14% Similarity=0.074 Sum_probs=115.3
Q ss_pred HHHHHHHHHHHcC-CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCC-C
Q 035915 158 EIQARNKVLKHCG-LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLD-L 235 (344)
Q Consensus 158 le~AR~~IA~~Lg-a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~-g 235 (344)
..+.|+.||++++ ++++ +|++|+|+++|+.+++.++ ..+||+++...-- .......++..|++++.+|.+..+ .
T Consensus 64 ~~~lr~~ia~~~~~~~~~--~vi~t~G~~~al~~~~~~l-~~~gd~Vl~~~P~-y~~~~~~~~~~g~~v~~v~~~~~~~~ 139 (373)
T PRK07324 64 SPEFKEAVASLYQNVKPE--NILQTNGATGANFLVLYAL-VEPGDHVISVYPT-YQQLYDIPESLGAEVDYWQLKEENGW 139 (373)
T ss_pred CHHHHHHHHHHhcCCChh--hEEEcCChHHHHHHHHHHh-CCCCCEEEEcCCC-chhHHHHHHHcCCEEEEEecccccCC
Confidence 3468999999885 6665 7999999999999999888 5789986643211 112334566679999999986432 2
Q ss_pred ccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc---HHHHH-HHHhCCcEEEecccccCcCCc--cCCCCCC-CCc
Q 035915 236 RIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS---MHWIS-EAHRNSWHVLLDATALVVGED--RLNLALH-RPD 306 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P---l~~Ia-~ar~~g~~vlvDAaQa~~G~~--~LDLs~l-~~D 306 (344)
.++.++|++.+++ +++++.++..+| |.+++ ++.|. .|+++|+++++|.+..-.... ...+... +-.
T Consensus 140 ~~d~~~l~~~~~~-----~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~~~~~~~ 214 (373)
T PRK07324 140 LPDLDELRRLVRP-----NTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIADLYEKG 214 (373)
T ss_pred CCCHHHHHHhCCC-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChhhccCCE
Confidence 4688889887764 467888887776 99999 54454 468899999999986421111 1111111 223
Q ss_pred EEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 307 FVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 307 Fvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+++.|+-|. ||.| | +|.++..++..+
T Consensus 215 I~~~s~SK~-~~~~-G~RiG~i~~~~~li~ 242 (373)
T PRK07324 215 ISTNSMSKT-YSLP-GIRVGWIAANEEVID 242 (373)
T ss_pred EEEecchhh-cCCc-cceeEEEecCHHHHH
Confidence 667799999 8856 6 699888655443
No 149
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.20 E-value=1.3e-10 Score=112.50 Aligned_cols=153 Identities=13% Similarity=0.045 Sum_probs=108.2
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCccC
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLDLRIK 238 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i~ 238 (344)
.+.|+.+++++|++++ +|+||+|+++++.+++..+ .+|+.++..-.++. +...++..|++++.+| +
T Consensus 50 ~~lr~~la~~~~~~~~--~i~~t~G~~~~i~~~~~~l--~~g~vl~~~p~y~~--~~~~~~~~g~~~~~~~--------d 115 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA--SVLPVNGAQEAIYLLPRLL--APGRVLVLAPTYSE--YARAWRAAGHEVVELP--------D 115 (330)
T ss_pred HHHHHHHHHHhCCChh--hEEECCCHHHHHHHHHHHh--CCCeEEEeCCCcHH--HHHHHHHcCCEEEEeC--------C
Confidence 6789999999999876 7999999999999987765 46754444433332 3344566799988877 4
Q ss_pred HHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcCCccCCCC----CCCCcEE
Q 035915 239 GSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVGEDRLNLA----LHRPDFV 308 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~~~LDLs----~l~~DFv 308 (344)
.++|++.+.+ ++++.+...+| |.++|.+.+. .|+++|+++++|.++.- .....++. ..+-+++
T Consensus 116 ~~~l~~~~~~------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~-~~~~~~~~~~~~~~~~~i~ 188 (330)
T TIGR01140 116 LDRLPAALEE------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFID-FTPDASLAPQAARFPGLVV 188 (330)
T ss_pred HHHHHhhccc------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccc-cCCccchhhHhccCCCEEE
Confidence 5677777632 45666666666 9999975543 34789999999999863 21111222 1245699
Q ss_pred EEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 309 LCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 309 v~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+.|++|+ ||.| | +|+++++++..+
T Consensus 189 ~~S~SK~-~g~~-G~R~G~i~~~~~~~~ 214 (330)
T TIGR01140 189 LRSLTKF-FGLA-GLRLGFVVAHPALLA 214 (330)
T ss_pred EEecchh-hcCc-hhhhhheeCCHHHHH
Confidence 9999999 9856 5 699998776544
No 150
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.20 E-value=4.6e-10 Score=112.42 Aligned_cols=152 Identities=14% Similarity=0.012 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcC---HHHHHHHHHcCCcEEEEEeCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEE---LDYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~---~~~ir~la~~~G~kV~~vp~~~~ 233 (344)
..++--++++++.|+. ..+.++++|.|+++++.++ +++||++++...+. ...+...+...|+++++++.+..
T Consensus 65 ~~~~lE~~la~leg~~----~av~~sSG~aAi~~al~al-l~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~ 139 (384)
T PRK06434 65 TVQAFEEKYAVLENAE----HALSFSSGMGAITSAILSL-IKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRL 139 (384)
T ss_pred hHHHHHHHHHHHhCCC----cEEEeCCHHHHHHHHHHHH-hCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCCh
Confidence 4455566699999984 2566667779999999887 78999976544332 22333455678999999987642
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEEE
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLC 310 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~ 310 (344)
..+. +++ .++++|.+.+.+| +.+.|++.|.+ +|+++ ++||++++. +...-.+ .+++|++++
T Consensus 140 -~~~~-------l~~----~~tklv~~e~~snpt~~v~Di~~I~~la~~~~--lvVD~t~~s-~~~~~pl-~~gaDivv~ 203 (384)
T PRK06434 140 -NSLD-------FDP----SNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFAS-PYNQNPL-DLGADVVIH 203 (384)
T ss_pred -hhee-------ecC----CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC--eEEECCCCC-cccCCch-hcCCCEEEe
Confidence 1121 222 1478888887776 89999988865 68887 567999987 6552222 368999999
Q ss_pred ccccCCCCCCCc--eEEEEEeC
Q 035915 311 NLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 311 S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
|+||+ ++++.+ -|+++.++
T Consensus 204 S~tK~-i~G~~d~~gG~vv~~~ 224 (384)
T PRK06434 204 SATKY-ISGHSDVVMGVAGTNN 224 (384)
T ss_pred ecccc-cCCCCCceEEEEecCc
Confidence 99999 887864 45555543
No 151
>PRK08912 hypothetical protein; Provisional
Probab=99.20 E-value=1.1e-09 Score=107.81 Aligned_cols=165 Identities=12% Similarity=0.017 Sum_probs=113.2
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 159 IQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 159 e~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+.|+.+++++ | +++++ +|++|+|+|+|+.+++..+ ..+|+.|+ ....|. .+...++..|++++.+|.+
T Consensus 66 ~~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~al~~~~~~~-~~~gd~Vlv~~p~y~--~~~~~~~~~g~~~~~~~~~ 141 (387)
T PRK08912 66 PELRQAVAAHYARFQGLDLDPET-EVMVTSGATEALAAALLAL-VEPGDEVVLFQPLYD--AYLPLIRRAGGVPRLVRLE 141 (387)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcc-cEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCch--hhHHHHHHcCCEEEEEecC
Confidence 34566666654 4 44432 6999999999999888877 46788864 343333 2344456679999999886
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHH---H-HHHHhCCcEEEecccccCc--CC---cc-CC
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHW---I-SEAHRNSWHVLLDATALVV--GE---DR-LN 299 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~---I-a~ar~~g~~vlvDAaQa~~--G~---~~-LD 299 (344)
..+..++.++|++.+.+ +++++.++..+| |.++|.+. | ..|+++++++++|.+..-. +. .+ ..
T Consensus 142 ~~~~~~~~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~ 216 (387)
T PRK08912 142 PPHWRLPRAALAAAFSP-----RTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMT 216 (387)
T ss_pred cccCcCCHHHHHHHhCc-----cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhh
Confidence 43456888999988864 356777775566 99999754 3 3358899999999987420 10 11 11
Q ss_pred CCC-CCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 300 LAL-HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 300 Ls~-l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+.. .+.++++.|+.|. ||.| | +|++++.++..+
T Consensus 217 ~~~~~~~~i~~~S~SK~-~g~~-GlRiG~~~~~~~~~~ 252 (387)
T PRK08912 217 LPGMRERTVKIGSAGKI-FSLT-GWKVGFVCAAPPLLR 252 (387)
T ss_pred CCCccCceEEEeechhh-ccCc-CceeEEEecCHHHHH
Confidence 211 2457999999998 8855 7 899998776543
No 152
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.20 E-value=5.2e-10 Score=109.86 Aligned_cols=166 Identities=12% Similarity=0.056 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC----GL--PDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L----ga--~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.|++++ |. ++++ +|++|+|+++++++++..+ ..+||.++ ....+.. ....++..|++++.+|.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~~-~vi~t~G~~~~l~~~~~~~-~~~gd~vlv~~P~y~~--~~~~~~~~G~~v~~v~~ 144 (383)
T TIGR03540 69 MLAYRQAVADWYKRRFGVELDPET-EVLSLIGSKEGIAHIPLAF-VNPGDIVLVPDPGYPV--YRIGTLFAGGEPYEMPL 144 (383)
T ss_pred CHHHHHHHHHHHHHhhCCCCCCCC-eEEECCCcHHHHHHHHHHh-CCCCCEEEEeCCCCcc--hHHHHHhcCCEEEEEec
Confidence 345777777765 44 3332 6999999999999999887 57899864 3444432 22334557999999998
Q ss_pred CCCC-CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHH---H-HHHHhCCcEEEecccccCc---CCccCCC
Q 035915 231 AWLD-LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHW---I-SEAHRNSWHVLLDATALVV---GEDRLNL 300 (344)
Q Consensus 231 ~~~~-g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~---I-a~ar~~g~~vlvDAaQa~~---G~~~LDL 300 (344)
+..+ ..++.+++++.+.+ ++++|.+..-+| |..++.+. | ..|+++++++++|-++.-. +.....+
T Consensus 145 ~~~~g~~~d~~~l~~~~~~-----~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~ 219 (383)
T TIGR03540 145 KEENGFLPDFDAIPEDIAK-----KAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSF 219 (383)
T ss_pred CcccCCccCHHHHHhhccc-----cceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCc
Confidence 6432 34688888877754 367777765556 99999643 3 3358899999999998620 3233343
Q ss_pred CCC----CCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 301 ALH----RPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 301 s~l----~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
..+ +..+++.|+=|. ||.| | +|+++..+++.+
T Consensus 220 ~~~~~~~~~~i~~~SfSK~-~g~~-GlRiG~~i~~~~l~~ 257 (383)
T TIGR03540 220 LEVDGAKDVGIEFHSLSKT-YNMT-GWRIGMAVGNADLIA 257 (383)
T ss_pred ccCCCcccCEEEEEecccc-cCCc-cceeeEEeCCHHHHH
Confidence 222 234677788899 8855 7 999988766544
No 153
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.20 E-value=4.6e-10 Score=109.67 Aligned_cols=161 Identities=12% Similarity=0.067 Sum_probs=109.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCC
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~ 233 (344)
....++.++++++++|.+ + .|++|+| ++++..++.++ +.+|+.++ ....|... +.. +...|+++..++
T Consensus 77 ~~l~~~l~~~l~~~~g~~-~--~i~~~sG-~~a~~~a~~~~-~~~gd~vi~~~~~~~~~-~~~-~~~~g~~~~~~~---- 145 (385)
T TIGR01825 77 LRLHEELEEKLAKFKKTE-A--ALVFQSG-FNTNQGVLSAL-LRKGDIVLSDELNHASI-IDG-LRLTKATKKIYK---- 145 (385)
T ss_pred cHHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHHHHHHHh-CCCCCEEEEEccccHHH-HHH-HHhcCCceEEeC----
Confidence 345688999999999964 2 5888877 55666666665 67899865 44444432 111 223466665543
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCcc---------CCCC
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDR---------LNLA 301 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~---------LDLs 301 (344)
.++.+++++.+.+.. ..++++|++..+.| |.+.|++.|.+ ++++|+++++|.+|+. |..+ +++.
T Consensus 146 --~~d~~~l~~~l~~~~-~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR01825 146 --HADMDDLDRVLRENP-SYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGS-GVMGEAGRGTVHHFGLE 221 (385)
T ss_pred --CCCHHHHHHHHHhhc-cCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccc-cCcCCCCCccHhhcCCC
Confidence 246677877775421 12578888887654 99999987764 6999999999999987 6432 3443
Q ss_pred CCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 302 LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 302 ~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
.+.||++.|++|+ ||.+ | |+++.+++..+
T Consensus 222 -~~~~i~~~s~sK~-~~~~-g-G~~~~~~~~~~ 250 (385)
T TIGR01825 222 -DKVDIQVGTLSKA-IGVV-G-GYAAGHKELIE 250 (385)
T ss_pred -cCCcEEEEeccHH-hhcC-C-CEEecCHHHHH
Confidence 5789999999999 8854 5 77776655433
No 154
>PRK03321 putative aminotransferase; Provisional
Probab=99.19 E-value=1.9e-10 Score=111.54 Aligned_cols=166 Identities=12% Similarity=0.075 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
..++.|+.+|+++|++++ +|++|+|+++++++++..+ +.+||.++...- ........++..|++++.+|.+. ++.
T Consensus 58 g~~~lr~~ia~~~~~~~~--~I~~~~G~~~~l~~~~~~~-~~~gd~Vli~~p-~y~~~~~~~~~~g~~~~~v~~~~-~~~ 132 (352)
T PRK03321 58 GAVELRAALAEHLGVPPE--HVAVGCGSVALCQQLVQAT-AGPGDEVIFAWR-SFEAYPILVQVAGATPVQVPLTP-DHT 132 (352)
T ss_pred cHHHHHHHHHHHhCcCHH--HEEECCCHHHHHHHHHHHh-cCCCCEEEeCCC-CHHHHHHHHHHcCCEEEEccCCC-CCC
Confidence 367899999999999876 6999999999999988876 578998764321 11112233456799999998864 356
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHh--CCcEEEecccccCc--CC-cc--CCCCCCCCc
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHR--NSWHVLLDATALVV--GE-DR--LNLALHRPD 306 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~--~g~~vlvDAaQa~~--G~-~~--LDLs~l~~D 306 (344)
++.+++++.+++ ++++|.++..+| |.++|++.+.+ ++. +++++++|.+..-. +. .+ +..-+...+
T Consensus 133 ~~~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 207 (352)
T PRK03321 133 HDLDAMAAAITD-----RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPN 207 (352)
T ss_pred CCHHHHHHhhcc-----CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCC
Confidence 788889888764 467887776666 99999977754 454 58999999988520 11 11 111111233
Q ss_pred -EEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 307 -FVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 307 -Fvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+++.|+=|. ||.| | +|+++.++++.+
T Consensus 208 vi~~~S~SK~-~g~~-GlRiG~~v~~~~~~~ 236 (352)
T PRK03321 208 VVVLRTFSKA-YGLA-GLRVGYAVGHPEVIA 236 (352)
T ss_pred EEEEecchHH-hhhH-HHhhhhhcCCHHHHH
Confidence 556688998 8855 6 899998765544
No 155
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.19 E-value=4.1e-10 Score=108.90 Aligned_cols=160 Identities=13% Similarity=0.141 Sum_probs=112.3
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCcc
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLDLRI 237 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i 237 (344)
.+.|+.||+++|++++ +|++|+|+++++++++.++ +.+||.++ ..-.|. .....++..|++++.+|.+. ++.+
T Consensus 63 ~~lr~aia~~~~~~~~--~I~it~G~~~al~~~~~~l-~~~gd~vlv~~P~y~--~~~~~~~~~g~~~~~v~~~~-~~~~ 136 (353)
T PRK05387 63 DALRQAIAAYYGLDPE--QVFVGNGSDEVLAHAFLAF-FNHDRPLLFPDITYS--FYPVYAGLYGIPYEEIPLDD-DFSI 136 (353)
T ss_pred HHHHHHHHHHhCCCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEeCCCHH--HHHHHHHHcCCEEEEeecCC-CCCC
Confidence 6799999999999876 7999999999999999988 57899865 333332 23344566799999999864 3567
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHh-CCcEEEecccccCcC-CccCCC-CCCCCcEEEEc
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHR-NSWHVLLDATALVVG-EDRLNL-ALHRPDFVLCN 311 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~-~g~~vlvDAaQa~~G-~~~LDL-s~l~~DFvv~S 311 (344)
+.++|++ .++++.++.-+| |.++|.+.+.+ ++. +++++++|-+..-.+ ...+.+ ...+-.+++.|
T Consensus 137 d~~~l~~---------~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S 207 (353)
T PRK05387 137 DVEDYLR---------PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQT 207 (353)
T ss_pred CHHHHHh---------cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEe
Confidence 8877652 134566655556 99999987765 444 389999998764212 111111 12244699999
Q ss_pred cccCCCCCCC-ceEEEEEeCCCcc
Q 035915 312 LDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 312 ~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
+.|. ||.|. .+|+++..++..+
T Consensus 208 ~SK~-~~~~GlR~G~~~~~~~~~~ 230 (353)
T PRK05387 208 FSKS-RSLAGLRVGFAIGHPELIE 230 (353)
T ss_pred hhHh-hcchhhhceeeecCHHHHH
Confidence 9998 87551 3899988765543
No 156
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.18 E-value=6e-10 Score=106.65 Aligned_cols=195 Identities=17% Similarity=0.151 Sum_probs=142.7
Q ss_pred ccchHHHHHHhhccCC--CCh--hhh--h-hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE
Q 035915 132 TQLEPSRLLDILTKKS--SFP--GSF--I-SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM 204 (344)
Q Consensus 132 v~~~~~~L~~~L~gns--s~~--g~~--a-s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv 204 (344)
+.++-+.|.++--|-| .|. |+. . .-.+.+--+.+++|||++ .+=+|.||.+|=-.+..++- ++||.++
T Consensus 30 t~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg~D----~~R~t~GARe~KfavMhal~-~~gd~vV 104 (382)
T COG1103 30 TEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLGMD----EVRVTAGAREAKFAVMHALC-KEGDWVV 104 (382)
T ss_pred CHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhCCc----eeeecccchhhHHHHHHHhc-cCCCEEE
Confidence 3466677777633333 122 332 1 124666777799999995 58999999999888888773 5789876
Q ss_pred EcCCcC-HHHHHHHHHcCCcEEEEEeCC-CCCCccCHHHHHHHhhhcCC--CCCeeEEEEeCcc-c-cccccHHHHHH-H
Q 035915 205 TIIGEE-LDYVREFASFKESKVILAPEA-WLDLRIKGSQLSQYFRRKCK--HTPKGLFSYPADI-N-GTRYSMHWISE-A 277 (344)
Q Consensus 205 S~~eH~-~~~ir~la~~~G~kV~~vp~~-~~~g~i~~~~L~~~l~~~~~--~~~t~LVa~~avS-N-G~i~Pl~~Ia~-a 277 (344)
.+---| ...+ .|++.|..|..+|.+ .++-.|+.+...+.|..-.+ ..+..|..++++. | |.+.+.+.++. |
T Consensus 105 ~D~~aHYttyv--AAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic 182 (382)
T COG1103 105 VDSLAHYTTYV--AAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKIC 182 (382)
T ss_pred EcCcchHHHHH--HHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHH
Confidence 443323 3222 256679999999964 33456888877776653211 1346788889887 5 99999988875 6
Q ss_pred HhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 278 HRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 278 r~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
|+.|+++++.+|=.+ |..|++..+.++||++.|+||- ..+-.-+|+|-++.++.+.
T Consensus 183 ~e~gvPlllN~AYt~-Grmpvs~ke~g~DFiVgSGHKs-mAAs~PiGvl~~~eE~ae~ 238 (382)
T COG1103 183 REYGVPLLLNCAYTV-GRMPVSGKEIGADFIVGSGHKS-MAASAPIGVLAMSEEWAEI 238 (382)
T ss_pred HHcCCceEeecceee-ccccccccccCCCEEEecCccc-hhccCCeeEEeehhHHHHH
Confidence 999999999999999 9999999999999999999997 5544449999999887665
No 157
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.17 E-value=1.1e-10 Score=113.92 Aligned_cols=161 Identities=15% Similarity=0.029 Sum_probs=112.3
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCC-CeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCcc
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRG-NFYMTIIGEELDYVREFASFKESKVILAPEAWLDLRI 237 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~G-d~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i 237 (344)
.+.|+++|+++|++++ +|++|+|+++++++++.++. .+| +.++... .....+...++..|++++.+|.+. +..+
T Consensus 63 ~~Lr~aia~~~~~~~~--~I~it~Gs~~~i~~~~~~~~-~~g~d~vlv~~-P~y~~y~~~~~~~g~~v~~v~~~~-~~~~ 137 (354)
T PRK04635 63 PELINAYSAYAGVAPE--QILTSRGADEAIELLIRAFC-EPGQDSIACFG-PTYGMYAISAETFNVGVKALPLTA-DYQL 137 (354)
T ss_pred HHHHHHHHHHhCcCHH--HEEEeCCHHHHHHHHHHHhc-CCCCCeEEEcC-CChHHHHHHHHHcCCEEEEEecCC-CCCC
Confidence 5578999999999887 79999999999999999884 567 7765321 112224445667899999999864 3567
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHH-Hh-CCcEEEecccccCcCCcc---CCCCCC-CCcEEE
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEA-HR-NSWHVLLDATALVVGEDR---LNLALH-RPDFVL 309 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~a-r~-~g~~vlvDAaQa~~G~~~---LDLs~l-~~DFvv 309 (344)
+.+.++. + + +++++.++.-+| |+++|.+.+.++ +. .++++++|.++.- -... +++... +-=+++
T Consensus 138 ~~~~l~~-~-~-----~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~-~~~~~s~~~~~~~~~~~iv~ 209 (354)
T PRK04635 138 PLDYIEQ-L-D-----GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIE-FCPEYSVADLLASYPNLVVL 209 (354)
T ss_pred CHHHHHh-c-c-----CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHh-hccCcchHHHHhhCCCEEEE
Confidence 7777752 3 2 467888876666 999999877654 43 3699999999754 2111 111111 111577
Q ss_pred EccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
-|++|+ ||.| | +|+++++++..+
T Consensus 210 ~S~SK~-~~l~-GlRlG~~i~~~~~~~ 234 (354)
T PRK04635 210 RTLSKA-FALA-GARCGFTLANEELIE 234 (354)
T ss_pred echHHH-hhhh-HHHHhhhhCCHHHHH
Confidence 899999 8844 6 799998876554
No 158
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.17 E-value=9.8e-10 Score=108.99 Aligned_cols=156 Identities=11% Similarity=0.028 Sum_probs=108.3
Q ss_pred hhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEe
Q 035915 153 FISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAP 229 (344)
Q Consensus 153 ~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp 229 (344)
.......+.++++|++.|+. .++.++|+++|+.++... +++||+++ +...+. ...+.......++++.+.
T Consensus 51 ~~~p~~~~le~~lA~leg~~----~~v~~~sG~aAi~~~l~~--l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~- 123 (364)
T PRK07269 51 TKNPTRAKLEETLAAIESAD----YALATSSGMSAIVLAFSV--FPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA- 123 (364)
T ss_pred CCCccHHHHHHHHHHHhCCC----eEEEeCCHHHHHHHHHHH--hCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec-
Confidence 33345677888899999863 589999999999988753 47899865 433344 222222222223333221
Q ss_pred CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCc
Q 035915 230 EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPD 306 (344)
Q Consensus 230 ~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~D 306 (344)
.+.+++++++++ +|++|.+...+| |...+++.|.+ +|++|+++++|.+++. +...-.+ .+++|
T Consensus 124 -------~d~~~l~~~i~~-----~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~~-~~~~~pl-~~gaD 189 (364)
T PRK07269 124 -------NTEEELIAAIEE-----DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFYS-PIYQRPI-ELGAD 189 (364)
T ss_pred -------CCHHHHHHhcCc-----CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCcc-cccCCch-hhCCc
Confidence 356788888875 478888877776 99999987765 6999999999999877 5432223 46899
Q ss_pred EEEEccccCCCCCCCc--eEEEEEeC
Q 035915 307 FVLCNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 307 Fvv~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
++++|++|+ ++++.. .|+++.++
T Consensus 190 ivv~S~tK~-l~g~~d~~gG~v~~~~ 214 (364)
T PRK07269 190 IVLHSATKY-LSGHNDVLAGVVVTND 214 (364)
T ss_pred EEEecCcee-ccCCCcccceEEEeCc
Confidence 999999999 887755 45555543
No 159
>PRK09265 aminotransferase AlaT; Validated
Probab=99.15 E-value=1.6e-09 Score=107.65 Aligned_cols=159 Identities=12% Similarity=0.106 Sum_probs=108.8
Q ss_pred HHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 159 IQARNKVLKHC------GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 159 e~AR~~IA~~L------ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+.|+.+|+++ |++++ +|+||+|+++++.+++..+ +.+||.|+ +...|.. +...++..|.+++.++.+
T Consensus 75 ~~lr~~ia~~~~~~~~~~~~~~--~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~v~~~~~ 149 (404)
T PRK09265 75 FSARKAIMQYYQQKGIPDVDVD--DIYIGNGVSELIVMAMQAL-LNNGDEVLVPAPDYPL--WTAAVSLSGGKPVHYLCD 149 (404)
T ss_pred HHHHHHHHHHHhccCCCCCCcc--cEEEeCChHHHHHHHHHHh-CCCCCEEEEeCCCCcC--hHHHHHHcCCEEEEEecc
Confidence 46888888887 77776 7999999999999999887 57899854 5555542 333344568888877765
Q ss_pred CC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc---HHHHH-HHHhCCcEEEecccccCc---CCccCCCC
Q 035915 232 WL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS---MHWIS-EAHRNSWHVLLDATALVV---GEDRLNLA 301 (344)
Q Consensus 232 ~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P---l~~Ia-~ar~~g~~vlvDAaQa~~---G~~~LDLs 301 (344)
.. +..++.++|++.+++ +++++.+..-+| |.++| +++|. .++++|+++++|-+..-. +.....+.
T Consensus 150 ~~~~~~~d~~~l~~~~~~-----~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 224 (404)
T PRK09265 150 EEAGWFPDLDDIRSKITP-----RTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIA 224 (404)
T ss_pred cccCCCCCHHHHHHhccc-----cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHH
Confidence 32 345788889888754 367777776666 99999 54443 468899999999875320 11111222
Q ss_pred CCCCc---EEEEccccCCCCCCCc--eEEEEEe
Q 035915 302 LHRPD---FVLCNLDNTQNAQPSK--ITCLLIR 329 (344)
Q Consensus 302 ~l~~D---Fvv~S~HK~l~G~P~G--iG~L~Vr 329 (344)
.+..+ +++.|+=|. ||.| | +|+++..
T Consensus 225 ~~~~~~~vi~~~S~SK~-~~~p-GlRiG~~v~~ 255 (404)
T PRK09265 225 SLAPDLLCVTFNGLSKA-YRVA-GFRVGWMVLS 255 (404)
T ss_pred HcCCCceEEEEecchhh-ccCc-ccceEEEEEe
Confidence 22222 345677899 8767 6 7998863
No 160
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.15 E-value=1.2e-09 Score=108.27 Aligned_cols=166 Identities=10% Similarity=0.047 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHCG------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~Lg------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.||++++ +++++ +|++|+|+++|+.+++..+ ..+||.|+ ..-.+.. ....++..|++++.+|.
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~-~I~it~G~~~al~~~~~~~-~~~Gd~Vlv~~P~y~~--~~~~~~~~G~~~~~v~~ 146 (399)
T PRK07681 71 IQEFHEAVTEYYNNTHNVILNADK-EVLLLMGSQDGLVHLPMVY-ANPGDIILVPDPGYTA--YETGIQMAGATSYYMPL 146 (399)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCC-eEEECCCcHHHHHHHHHHh-CCCCCEEEECCCCccc--hHHHHHhcCCEEEEEec
Confidence 4568888888875 45522 7999999999999999887 46899865 3334431 23335567999999998
Q ss_pred CCCC-CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc---CCccCCC
Q 035915 231 AWLD-LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV---GEDRLNL 300 (344)
Q Consensus 231 ~~~~-g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~---G~~~LDL 300 (344)
+..+ ..++.+++.+.+.+ +++++.++.-+| |.+++.+.+. .|+++++++++|-+..-. +.....+
T Consensus 147 ~~~~~~~~d~~~l~~~~~~-----~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~ 221 (399)
T PRK07681 147 KKENDFLPDLELIPEEIAD-----KAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISF 221 (399)
T ss_pred CCCCCCcCCHHHHHHhccc-----cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCCh
Confidence 6432 24688888877753 367777774455 9999964432 358899999999998720 2222222
Q ss_pred CC----CCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 301 AL----HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 301 s~----l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.. .+..+++.|+.|. ||.| | +|.++..+++.+
T Consensus 222 ~~~~~~~~~~i~~~S~SK~-~~~~-GlRiG~~i~~~~l~~ 259 (399)
T PRK07681 222 LSVPGAKEVGVEINSLSKS-YSLA-GSRIGYMIGNEEIVR 259 (399)
T ss_pred hhCCCCcccEEEEeecccc-cCCc-cceeEEEecCHHHHH
Confidence 21 1245788899999 8856 7 899988765544
No 161
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.15 E-value=6.1e-10 Score=110.18 Aligned_cols=164 Identities=13% Similarity=0.072 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
..+.|+.|++++|++++ +|++|+|++++++++...+ +.+|++++ ..-.+. .....++..|+++..+|.+. +..
T Consensus 88 ~~~lr~~ia~~~~~~~~--~I~~t~Ga~~~i~~~~~~~-~~~gd~Vlv~~P~y~--~y~~~~~~~g~~~~~v~~~~-~~~ 161 (380)
T PLN03026 88 SRRLRAALAEDSGLESE--NILVGCGADELIDLLMRCV-LDPGDKIIDCPPTFG--MYVFDAAVNGAEVIKVPRTP-DFS 161 (380)
T ss_pred HHHHHHHHHHHhCcChh--hEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChH--HHHHHHHHcCCEEEEeecCC-CCC
Confidence 45799999999999876 7999999999999998887 46898865 333332 23344556799999998764 356
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHhCCcEEEecccccCc-CC-ccCC-CCCCCCcEEEEc
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHRNSWHVLLDATALVV-GE-DRLN-LALHRPDFVLCN 311 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~g~~vlvDAaQa~~-G~-~~LD-Ls~l~~DFvv~S 311 (344)
++.++|++.+.. .+++++.+...+| |+++|.+.+.++-+..+++++|-+..-. +. ..+. +...+-.+++.|
T Consensus 162 ~d~~~l~~~~~~----~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~S 237 (380)
T PLN03026 162 LDVPRIVEAVET----HKPKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRT 237 (380)
T ss_pred cCHHHHHHHHhc----cCCcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcchHHHHHhCCCEEEEec
Confidence 788999888732 1467777776666 9999998887653334899999997520 10 1111 222344688999
Q ss_pred cccCCCCCCCc--eEEEEEeCCCc
Q 035915 312 LDNTQNAQPSK--ITCLLIRKKSF 333 (344)
Q Consensus 312 ~HK~l~G~P~G--iG~L~Vr~~~~ 333 (344)
+-|. ||.| | +|.++..++..
T Consensus 238 fSK~-~gla-GlRiGy~~~~~~~i 259 (380)
T PLN03026 238 FSKR-AGLA-GLRVGYGAFPLSII 259 (380)
T ss_pred chHh-hcCc-cccceeeecCHHHH
Confidence 9999 8844 6 68777665544
No 162
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.14 E-value=1.2e-09 Score=109.89 Aligned_cols=158 Identities=12% Similarity=0.028 Sum_probs=112.5
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCH--HHHHHHHHcCCcEEEEE
Q 035915 152 SFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEEL--DYVREFASFKESKVILA 228 (344)
Q Consensus 152 ~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~--~~ir~la~~~G~kV~~v 228 (344)
+......+..++.++.+-+.. + .++++++++|++.++.++ +++||+++ +.-.+.. ..+..++++.|++|..+
T Consensus 60 R~gnPt~~~Le~~la~le~~~-~---~v~~sSG~aAi~~~l~al-l~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~v 134 (395)
T PRK05967 60 TRGTPTTDALCKAIDALEGSA-G---TILVPSGLAAVTVPFLGF-LSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYY 134 (395)
T ss_pred CCCChHHHHHHHHHHHHhCCC-C---EEEECcHHHHHHHHHHHh-cCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEe
Confidence 333445566777788776653 2 455556899999998887 78999965 4444442 23345567789999988
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcC--CccCCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVG--EDRLNLALH 303 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G--~~~LDLs~l 303 (344)
+.+ +.+.+++++++ +|++|.+...+| +.+.|++.|.+ ||++|++++||.+++. + ..|++ +
T Consensus 135 d~~------~~e~l~~al~~-----~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~a~-p~~~~pl~---~ 199 (395)
T PRK05967 135 DPE------IGAGIAKLMRP-----NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTWAT-PLYFRPLD---F 199 (395)
T ss_pred CCC------CHHHHHHhcCc-----CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCccC-ceecChhH---c
Confidence 643 23568888875 478999987666 99999988865 6999999999999987 5 33444 7
Q ss_pred CCcEEEEccccCCCCCCCc--eEEEEEeC
Q 035915 304 RPDFVLCNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
++|+++-|.-|+ ++|-.+ .|++..++
T Consensus 200 GaDivv~S~tKy-~~Gh~d~~~G~v~~~~ 227 (395)
T PRK05967 200 GVDISIHAATKY-PSGHSDILLGTVSANE 227 (395)
T ss_pred CCCEEEEecccc-cCCCCCeeEEEEEcCH
Confidence 899999999998 442111 66555444
No 163
>PRK12414 putative aminotransferase; Provisional
Probab=99.14 E-value=3.4e-09 Score=104.65 Aligned_cols=167 Identities=10% Similarity=0.068 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHcCCC--CCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCC
Q 035915 157 PEIQARNKVLKHCGLP--DDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~--p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~ 233 (344)
..+..++.+++++|++ +++ +|++|+|+++|+.+++.++ +.+||.++ ....|.. ....++..|.+++.+|.+..
T Consensus 71 lr~~ia~~l~~~~g~~~~~~~-~i~it~g~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~v~~~~~ 146 (384)
T PRK12414 71 LREALAEKTERLYGARYDPAS-EVTVIASASEGLYAAISAL-VHPGDEVIYFEPSFDS--YAPIVRLQGATPVAIKLSPE 146 (384)
T ss_pred HHHHHHHHHHHHhCCCCCCCC-cEEEECChHHHHHHHHHHh-cCCCCEEEEeCCCccc--hHHHHHHcCCEEEEEecCcc
Confidence 4466777777778874 322 6999999999999999888 67899865 4444431 22334446899999998754
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHH---H-HHHHhCCcEEEecccccCc---CCccCCCCCC-
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHW---I-SEAHRNSWHVLLDATALVV---GEDRLNLALH- 303 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~---I-a~ar~~g~~vlvDAaQa~~---G~~~LDLs~l- 303 (344)
+..++.+.|++.+++ ++++|.++.-+| |.+++.+. | ..|+++++++++|.+..-. +.....+..+
T Consensus 147 ~~~~d~~~l~~~l~~-----~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~ 221 (384)
T PRK12414 147 DFRVNWDEVAAAITP-----RTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHR 221 (384)
T ss_pred ccccCHHHHHhhcCc-----ccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCc
Confidence 456889999988864 467777765556 99987543 3 3358899999999997530 1111112221
Q ss_pred ---CCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 304 ---RPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 304 ---~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+--+++.|+-|. ||.| | +|++++.+++.+
T Consensus 222 ~~~~~~i~~~SfSK~-~~~p-GlRiG~~v~~~~l~~ 255 (384)
T PRK12414 222 ELAERSVIVSSFGKS-YHVT-GWRVGYCLAPAELMD 255 (384)
T ss_pred CccCcEEEEeccccc-ccCc-cceEEEEecCHHHHH
Confidence 123899999998 8756 6 799988766543
No 164
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.14 E-value=1.3e-09 Score=107.11 Aligned_cols=158 Identities=15% Similarity=0.219 Sum_probs=111.9
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCCCCccC
Q 035915 160 QARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAWLDLRIK 238 (344)
Q Consensus 160 ~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i~ 238 (344)
..|+.+|+++|++++ +|++|+|+++++++++.++ +++||.++. .-.+. .....++..|++++.+|.+. +..++
T Consensus 75 ~lr~~ia~~~~~~~~--~i~~t~G~~~~l~~~~~~~-~~~gd~vli~~P~y~--~~~~~~~~~g~~~~~v~~~~-~~~~~ 148 (371)
T PRK05166 75 ALREAIAARTGVPAD--RIILGNGSEDLIAVICRAV-LRPGDRVVTLYPSFP--LHEDYPTMMGARVERVTVTP-DLGFD 148 (371)
T ss_pred HHHHHHHHHhCcCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEEcCCChH--HHHHHHHHcCCeEEEeecCC-CCCCC
Confidence 588999999999876 7999999999999999887 578998653 22322 23445566799999999864 35688
Q ss_pred HHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HH--hCCcEEEecccccCc--CCcc---CCC-CCCC-Cc
Q 035915 239 GSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AH--RNSWHVLLDATALVV--GEDR---LNL-ALHR-PD 306 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar--~~g~~vlvDAaQa~~--G~~~---LDL-s~l~-~D 306 (344)
.+++++.+++ +++++.++..+| |.++|.+.+.+ ++ +.++++++|.+..-. +... +.+ .... --
T Consensus 149 ~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~v 223 (371)
T PRK05166 149 LDALCAAVAR-----APRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPW 223 (371)
T ss_pred HHHHHHhhhc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCE
Confidence 8999888865 357888876666 99999976654 33 247889999986520 1100 111 1111 23
Q ss_pred EEEEccccCCCCCCC-ceEEEEEe
Q 035915 307 FVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 307 Fvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
+++.|+=|. ||.|. .+|.+++.
T Consensus 224 i~i~SfSK~-~~l~GlRiG~~i~~ 246 (371)
T PRK05166 224 IVLRTFSKA-YGLAGLRVGYGLVS 246 (371)
T ss_pred EEEeechHh-hhcchhheeeeecC
Confidence 788999999 87562 37988774
No 165
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.13 E-value=7.3e-10 Score=109.67 Aligned_cols=165 Identities=10% Similarity=0.022 Sum_probs=109.9
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 159 IQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 159 e~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+.|+.||+++ | +++++ .|++|+|+++|+.+++.++ +.+||.|+ ..-.+.. ....+...|++++.+|.+
T Consensus 76 ~~lr~aia~~~~~~~~~~~~~~~-~i~vt~G~~~al~~~~~~~-~~~gd~Vlv~~P~y~~--~~~~~~~~g~~~~~v~~~ 151 (394)
T PRK05942 76 ASFRQAITDWYHRRYGVELDPDS-EALPLLGSKEGLTHLALAY-VNPGDVVLVPSPAYPA--HFRGPLIAGAQIYPIILK 151 (394)
T ss_pred HHHHHHHHHHHHHHHCCCcCCCC-eEEEccChHHHHHHHHHHh-CCCCCEEEEcCCCCcc--hHHHHHHcCCEEEEeecC
Confidence 45777788776 4 34432 5889999999999999887 67899864 4444442 122234468999999886
Q ss_pred CCC-CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHH---HHH-HHHhCCcEEEecccccCc---CCccCC--
Q 035915 232 WLD-LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMH---WIS-EAHRNSWHVLLDATALVV---GEDRLN-- 299 (344)
Q Consensus 232 ~~~-g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~---~Ia-~ar~~g~~vlvDAaQa~~---G~~~LD-- 299 (344)
..+ ..++.+++++.+.+ +++++.++.-+| |.+++.+ .|. .|+++++++++|.+..-. +.....
T Consensus 152 ~~~~~~~d~~~l~~~~~~-----~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~ 226 (394)
T PRK05942 152 PENDWLIDLSSIPEEVAQ-----QAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLL 226 (394)
T ss_pred CccCCccCHHHHHHhccc-----cceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChh
Confidence 432 35888899887754 467777764455 9999964 333 358899999999985420 111112
Q ss_pred -CCC-CCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 300 -LAL-HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 300 -Ls~-l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+.. .+..+++.|+=|. ||.| | +|.++..+++.+
T Consensus 227 ~~~~~~~~~i~~~SfSK~-~~~~-GlRiG~i~~~~~l~~ 263 (394)
T PRK05942 227 EIPGAKDIGVEFHTLSKT-YNMA-GWRVGFVVGNRHIIQ 263 (394)
T ss_pred hCCCccccEEEEecchhc-cCCh-hhheeeeecCHHHHH
Confidence 211 1234666777798 8755 6 899998776544
No 166
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.12 E-value=4.7e-09 Score=103.93 Aligned_cols=170 Identities=14% Similarity=0.112 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHcC----C--CCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHCG----L--PDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~Lg----a--~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.++++++ . +++ .+|++|+|+|+|+++++.++ +.+|+.++. .-.+.. +...++..|++++.+|.
T Consensus 69 ~~~lr~~ia~~~~~~~~~~~~~~-~~i~it~G~~~al~~~~~~~-~~~gd~vl~~~p~y~~--~~~~~~~~g~~~~~~~~ 144 (391)
T PRK07309 69 LLELRQAAADFVKEKYNLDYAPE-NEILVTIGATEALSASLTAI-LEPGDKVLLPAPAYPG--YEPIVNLVGAEIVEIDT 144 (391)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHh-cCCCCEEEEeCCCCcc--hHHHHHHcCCEEEEEec
Confidence 3556667777663 3 222 27999999999999999887 578998653 333331 23334557999999987
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc---CCccCCCC
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV---GEDRLNLA 301 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~---G~~~LDLs 301 (344)
+..+..++.+.|++.+... ..+++++.++.-+| |+.++.+.+. .++++++++++|.+..-. +....++.
T Consensus 145 ~~~~~~~d~~~l~~~~~~~--~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~ 222 (391)
T PRK07309 145 TENDFVLTPEMLEKAILEQ--GDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIA 222 (391)
T ss_pred CCcCCcCCHHHHHHHhhcc--CCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHH
Confidence 6433467889998888641 12467777765455 9999864332 358899999999997641 11112332
Q ss_pred CCCCc--EEEEccccCCCCCCCc--eEEEEEeCCCccc
Q 035915 302 LHRPD--FVLCNLDNTQNAQPSK--ITCLLIRKKSFDT 335 (344)
Q Consensus 302 ~l~~D--Fvv~S~HK~l~G~P~G--iG~L~Vr~~~~~~ 335 (344)
....| +++.|+.|. ||.| | +|+++..+++.+.
T Consensus 223 ~~~~~~~i~~~S~SK~-~g~~-GlRvG~~v~~~~~~~~ 258 (391)
T PRK07309 223 EYLPDQTILINGLSKS-HAMT-GWRIGLIFAPAEFTAQ 258 (391)
T ss_pred HhccCCEEEEecChhh-ccCc-cceeEEEEeCHHHHHH
Confidence 22234 889999999 8866 6 8889987766543
No 167
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.11 E-value=1.3e-09 Score=107.01 Aligned_cols=166 Identities=11% Similarity=0.063 Sum_probs=112.0
Q ss_pred HHHHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC----GL--PDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L----ga--~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
+.+.|+.+++++ |. ++++ .|++|+|+++|+++++..+ ..+||.++ ..-.+.. ....++..|++++.+|.
T Consensus 71 ~~~lr~aia~~~~~~~g~~~~~~~-~ii~t~G~~~~i~~~~~~~-~~~gd~Vl~~~P~y~~--~~~~~~~~g~~~~~v~~ 146 (385)
T PRK09276 71 MLEFRKAVADWYKRRFGVELDPET-EVISLIGSKEGIAHIPLAF-VNPGDVVLVPDPGYPV--YKIGTIFAGGEPYFMPL 146 (385)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcHHHHHHHHHHh-CCCCCEEEEcCCCCcC--hHHHHHHcCCEEEEEec
Confidence 456777788877 43 4432 5999999999999999887 57899864 3333331 23335557999999988
Q ss_pred CCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc---CCccCCC
Q 035915 231 AWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV---GEDRLNL 300 (344)
Q Consensus 231 ~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~---G~~~LDL 300 (344)
+.. +..++.+++++.+.. +++++.+..-+| |..+|.+.+. .++++++++++|-+..-. ++....+
T Consensus 147 ~~~~g~~~d~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~ 221 (385)
T PRK09276 147 KEENGFLPDLDAIPEDVAK-----KAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSF 221 (385)
T ss_pred CCCCCCcCCHHHHHHhccc-----cceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCCh
Confidence 643 234678888777653 367777765456 9999974332 358899999999998630 2222222
Q ss_pred CCC----CCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 301 ALH----RPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 301 s~l----~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
..+ +..+++.|+=|. ||.| | +|+++..+++.+
T Consensus 222 ~~~~~~~~~~i~~~S~SK~-~g~~-GlRiG~~i~~~~l~~ 259 (385)
T PRK09276 222 LEVPGAKDVGIEFHSLSKT-YNMT-GWRIGFAVGNADLIA 259 (385)
T ss_pred hccCCCcCCEEEEecchhh-cCCc-chhheeeeCCHHHHH
Confidence 211 335777888899 8855 7 999988765544
No 168
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.11 E-value=3.3e-09 Score=104.84 Aligned_cols=154 Identities=11% Similarity=0.006 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp~~~ 232 (344)
...++.++++|++.|++. .++++|+++|+.++.. + +.+||+++ ....++ ...+...++..|++++.++..
T Consensus 52 pt~~~le~~la~l~g~~~----~~~~~sG~~ai~~~~~-l-l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~- 124 (366)
T PRK08247 52 PTRGVLEQAIADLEGGDQ----GFACSSGMAAIQLVMS-L-FRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTA- 124 (366)
T ss_pred chHHHHHHHHHHHhCCCc----EEEEcCHHHHHHHHHH-H-hCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCC-
Confidence 356788899999999953 3667777899988764 3 46899865 444454 223455556689999888752
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
+.+++++++++ ++++|.+...+| |.+.+++.|.+ ++++|+++++|.+++. +.....+ .+++|+++
T Consensus 125 -----d~~~l~~~i~~-----~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD~t~~~-~~~~~p~-~~g~di~i 192 (366)
T PRK08247 125 -----SLKAIEQAITP-----NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYT-PVLQRPL-EEGADIVI 192 (366)
T ss_pred -----CHHHHHHhccc-----CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcc-ccccCch-hcCCcEEE
Confidence 56778888765 467888765566 99999987764 6999999999999976 5432222 35799999
Q ss_pred EccccCCCCCCCc--eEEEEEe
Q 035915 310 CNLDNTQNAQPSK--ITCLLIR 329 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr 329 (344)
.|+.|+ ++++.+ .|+++.+
T Consensus 193 ~S~sK~-~~g~~d~~~G~iv~~ 213 (366)
T PRK08247 193 HSATKY-LGGHNDVLAGLVVAK 213 (366)
T ss_pred eeccee-ccCCCceeeeEEecC
Confidence 999999 886655 3544444
No 169
>PRK09082 methionine aminotransferase; Validated
Probab=99.10 E-value=2.9e-09 Score=105.07 Aligned_cols=168 Identities=12% Similarity=0.043 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHcCCCCCC-CeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDE-YLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~e-y~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
..+...+.+.+++|++.+. .+|++|+|+|+|+.+++.++ ..+||.++ ....|.. ....++..|.++..+|.+..+
T Consensus 72 lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~-~~~gd~Vli~~p~y~~--~~~~~~~~g~~~~~~~~~~~~ 148 (386)
T PRK09082 72 LREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILAL-VRPGDEVIVFDPSYDS--YAPAIELAGGRAVRVALQPPD 148 (386)
T ss_pred HHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCCchh--hHHHHHHcCCEEEEEecCccc
Confidence 3355566666677875432 26999999999999999887 56899865 3433331 233344569999999986444
Q ss_pred CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHH----HHHHhCCcEEEecccccCc---CCccCCC---CC
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWI----SEAHRNSWHVLLDATALVV---GEDRLNL---AL 302 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~I----a~ar~~g~~vlvDAaQa~~---G~~~LDL---s~ 302 (344)
..++.+++++.+++ +++++.++..+| |..++.+.+ ..|+++++++++|.+..-. +.....+ ..
T Consensus 149 ~~~d~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~ 223 (386)
T PRK09082 149 FRVDWQRFAAAISP-----RTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPE 223 (386)
T ss_pred ccCCHHHHHHhcCc-----cceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcC
Confidence 67888999888864 367777765556 998776433 3468899999999987530 1111111 11
Q ss_pred -CCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 303 -HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 303 -l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.+-.+++.|+-|. ||.| | +|+++..+++.+
T Consensus 224 ~~~~~i~~~S~SK~-~~~~-G~RiG~iv~~~~l~~ 256 (386)
T PRK09082 224 LRERAFVVSSFGKT-YHVT-GWKVGYCVAPAALSA 256 (386)
T ss_pred ccCcEEEEeechhh-ccch-hhhhhhhhCCHHHHH
Confidence 2345888999999 8866 6 799987765543
No 170
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=99.09 E-value=3.1e-11 Score=125.35 Aligned_cols=171 Identities=32% Similarity=0.496 Sum_probs=142.3
Q ss_pred HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcC---HHHHHHHHHcCCcEEEEEeCCCCCCcc
Q 035915 161 ARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEE---LDYVREFASFKESKVILAPEAWLDLRI 237 (344)
Q Consensus 161 AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~---~~~ir~la~~~G~kV~~vp~~~~~g~i 237 (344)
.+.++-.+|+.+.++|.++||.+-..+..+.++++++.-...+++.++|+ ++++++.|+.+|+++.-....|+...+
T Consensus 181 ik~ri~d~L~ipe~~y~lldtaSrvSaf~Ldaesy~f~~~~~lltiFgyetgAvlv~~r~A~~~Ggkt~sa~f~wp~~~l 260 (728)
T KOG2142|consen 181 IKLRIMDRLNIPESEYVLLDTASRVSAFPLDAESYPFDFNPKLLTIFGYETGAVLVMNRSAELKGGKTASAEFSWPMLYL 260 (728)
T ss_pred eeeeeecccccCCceEEEEEeecccccccchHhhCCCcccchheeecCCCchhhHHHhhhhHhhcCccceeecccchHHH
Confidence 77888999999888999999999999999999999986555588999998 566777788889998888888887778
Q ss_pred CHHHHHHHhhhcCC---CCCeeEEEEeCcc--ccccccHHHHHHHHhCCcEEEecccccCcCC--ccCCCCCCCCcEEEE
Q 035915 238 KGSQLSQYFRRKCK---HTPKGLFSYPADI--NGTRYSMHWISEAHRNSWHVLLDATALVVGE--DRLNLALHRPDFVLC 310 (344)
Q Consensus 238 ~~~~L~~~l~~~~~---~~~t~LVa~~avS--NG~i~Pl~~Ia~ar~~g~~vlvDAaQa~~G~--~~LDLs~l~~DFvv~ 310 (344)
..++|++.+...+. +....|+.|+.++ +|.++++.|...+.+++|++++|+-|.- .. .-+.++...|||..+
T Consensus 261 ~s~~lkkr~e~gk~~~kd~a~gl~vFp~~sRvtG~~ysy~wmt~al~~~whvlLda~~lG-~kdmd~yglS~f~Pdfqg~ 339 (728)
T KOG2142|consen 261 LSEKLKKRFEDGKLRFKDIAQGLFVFPTQSRVTGGMYSYSWMTLALANNWHVLLDALALG-PKDMDSYGLSLFQPDFQGP 339 (728)
T ss_pred HHHHHHHHHhhccccccchhhheeccchHhhhcccchhHHHHHHHHhhhHHHHHhhhccC-cchHhhhhhhccCccceee
Confidence 88889888875432 2235799999998 6999999999999999999999998874 21 123356678999999
Q ss_pred ccccCCCCC--CCceEEEEEeCCCc
Q 035915 311 NLDNTQNAQ--PSKITCLLIRKKSF 333 (344)
Q Consensus 311 S~HK~l~G~--P~GiG~L~Vr~~~~ 333 (344)
++++. ||. |.|.|||.|++.++
T Consensus 340 sf~fv-~g~d~psgfGcl~VkKs~i 363 (728)
T KOG2142|consen 340 SFYFV-FGRDDPSGFGCLEVKKSAI 363 (728)
T ss_pred eEEEE-eccCCCCceeeeeeehhhh
Confidence 99999 887 67999999998764
No 171
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.09 E-value=4.8e-09 Score=103.21 Aligned_cols=161 Identities=13% Similarity=0.115 Sum_probs=108.4
Q ss_pred HHHHHHHHHHHc-----CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 158 EIQARNKVLKHC-----GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 158 le~AR~~IA~~L-----ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
..+.|+.+++++ +++++ +|++|+|+|+|+++++..+ +.+|+.++. .-.+. + ....++..|++++.+|.+
T Consensus 68 ~~~lr~~ia~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~-~-~~~~~~~~g~~~~~v~~~ 142 (397)
T PRK07568 68 IPELREAFAKYYKKWGIDVEPD--EILITNGGSEAILFAMMAI-CDPGDEILVPEPFYA-N-YNGFATSAGVKIVPVTTK 142 (397)
T ss_pred CHHHHHHHHHHHHHhCCCCCcc--eEEEcCChHHHHHHHHHHh-cCCCCEEEEecCCCc-c-HHHHHHHcCCEEEEeecC
Confidence 466888888887 46665 7999999999999999887 678998653 32222 1 223345579999998875
Q ss_pred CCCCc--cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHH---HHH-HHHhCCcEEEecccccCc---CCcc---
Q 035915 232 WLDLR--IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMH---WIS-EAHRNSWHVLLDATALVV---GEDR--- 297 (344)
Q Consensus 232 ~~~g~--i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~---~Ia-~ar~~g~~vlvDAaQa~~---G~~~--- 297 (344)
..++. .+.++|++.+++ ++++|.++..+| |.+++.+ .|. .|+++++++++|.+..-. +...
T Consensus 143 ~~~g~~~~~~~~l~~~~~~-----~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~ 217 (397)
T PRK07568 143 IEEGFHLPSKEEIEKLITP-----KTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSA 217 (397)
T ss_pred cccCCCCCCHHHHHHhcCc-----cceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccCh
Confidence 32332 245778887754 467888776666 9999863 343 358899999999987521 1111
Q ss_pred CCCCCC-CCcEEEEccccCCCCCCC-ceEEEEEe
Q 035915 298 LNLALH-RPDFVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 298 LDLs~l-~~DFvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
+++... +--+++.|+.|. ||.|. .+|+++..
T Consensus 218 ~~~~~~~~~~i~~~S~SK~-~~~~G~R~G~~~~~ 250 (397)
T PRK07568 218 LSLEGLEDRVIIIDSVSKR-YSACGARIGCLISK 250 (397)
T ss_pred hhcCCCcCCEEEEecchhh-ccCCCcceEEEecC
Confidence 122211 122778899999 87552 48888774
No 172
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.09 E-value=3.6e-09 Score=105.16 Aligned_cols=162 Identities=17% Similarity=0.110 Sum_probs=113.3
Q ss_pred HHHHHHHHHHHHcCC------CCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 157 PEIQARNKVLKHCGL------PDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 157 ~le~AR~~IA~~Lga------~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
...+.|+.+++++|. +++ +|++|+|+|+|+.+++.++. .+|++++ ...++. .+...+...|++++.++
T Consensus 74 g~~~lr~~ia~~l~~~~~~~~~~~--~ii~t~G~t~al~~~~~~l~-~~gd~Vlv~~p~y~--~~~~~~~~~g~~~~~~~ 148 (403)
T TIGR01265 74 GALAAREAVAEYLSSDLPGKLTAD--DVVLTSGCSQAIEICIEALA-NPGANILVPRPGFP--LYDTRAAFSGLEVRLYD 148 (403)
T ss_pred CCHHHHHHHHHHHHhhcCCCCCHH--HEEEecChHHHHHHHHHHhC-CCCCEEEEeCCCch--hHHHHHHHcCCEEEEec
Confidence 356789999999985 344 79999999999999999884 6888854 444433 23344566799998887
Q ss_pred CCC-CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccH---HHHH-HHHhCCcEEEecccccCc---CCccCC
Q 035915 230 EAW-LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSM---HWIS-EAHRNSWHVLLDATALVV---GEDRLN 299 (344)
Q Consensus 230 ~~~-~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl---~~Ia-~ar~~g~~vlvDAaQa~~---G~~~LD 299 (344)
.+. .++.++.+++++++++ +++++.+++.+| |..+|. ++|. .|+++|+++++|.+..-. +.....
T Consensus 149 ~~~~~~~~~d~~~l~~~~~~-----~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~ 223 (403)
T TIGR01265 149 LLPEKDWEIDLDGLEALADE-----KTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIP 223 (403)
T ss_pred CCcccCCccCHHHHHHHhCc-----CccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccc
Confidence 643 2346888999888764 367777776666 999984 3443 468899999999987631 111122
Q ss_pred CCCCCC---cEEEEccccCCCCCCC-ceEEEEEe
Q 035915 300 LALHRP---DFVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 300 Ls~l~~---DFvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
+..+.. =.++.|+=|. |+.|. .+|++++.
T Consensus 224 ~~~~~~~~~vi~~~S~SK~-~~~pGlRiG~~v~~ 256 (403)
T TIGR01265 224 MASFASIVPVLSLGGISKR-WVVPGWRLGWIIIH 256 (403)
T ss_pred hhhhccCCcEEEEeecccc-cCCCcceEEEEEEe
Confidence 222222 2577899998 88782 38988874
No 173
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.09 E-value=3e-09 Score=105.86 Aligned_cols=160 Identities=13% Similarity=0.105 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC-CCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP-FFRGNFYMTI-IGEELDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~-~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
...+.++++|+++|.+ + .|+|++| ++|+..++..+. ..+|+.+++. ..|... + ..++..|+++..++.+
T Consensus 92 ~~~~Le~~la~~~g~~-~--~i~~~sG-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~-~-~~~~~~g~~~~~~~~~--- 162 (410)
T PRK13392 92 PHVLLERELADLHGKE-S--ALLFTSG-YVSNDAALSTLGKLLPGCVILSDALNHASM-I-EGIRRSGAEKQVFRHN--- 162 (410)
T ss_pred HHHHHHHHHHHHhCCC-C--EEEECcH-HHHHHHHHHHHhcCCCCCEEEEehhhhHHH-H-HHHHHcCCeEEEEeCC---
Confidence 4578889999999963 3 5777776 455555554442 3467876643 345432 2 2334568888776543
Q ss_pred CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCc-cC--------CCCC
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGED-RL--------NLAL 302 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~-~L--------DLs~ 302 (344)
+.+++.+.+... ...++++|.+...+| |.+.|++.|.+ ++++++++++|.+|+. |.. +- ++.
T Consensus 163 ---d~~~l~~~l~~~-~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~-g~~g~~g~g~~~~~~~~- 236 (410)
T PRK13392 163 ---DLADLEEQLASV-DPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAV-GLYGARGGGIAERDGLM- 236 (410)
T ss_pred ---CHHHHHHHHHhc-cCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccc-cCcCCCCCchhhhccCC-
Confidence 234455555421 112578888888776 99999987765 6889999999999996 642 11 111
Q ss_pred CCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 303 HRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
.++|+++.|+.|. ||.| | |++..+++..+
T Consensus 237 ~~~div~~tlsK~-~g~~-G-G~~~~~~~~~~ 265 (410)
T PRK13392 237 DRIDMIQGTLAKA-FGCL-G-GYIAASADLID 265 (410)
T ss_pred CCCcEEEEEChHh-hhcc-c-chhhcCHHHHH
Confidence 2579999999999 8866 5 66665554433
No 174
>PRK08363 alanine aminotransferase; Validated
Probab=99.08 E-value=4.4e-09 Score=104.13 Aligned_cols=159 Identities=13% Similarity=0.078 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEE-e
Q 035915 158 EIQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILA-P 229 (344)
Q Consensus 158 le~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~v-p 229 (344)
..+.|+.+++++ | ++++ +|++|+|+|+|+.++..++ ..+||.|+ ....+.. ....++..|.+++.+ +
T Consensus 72 ~~~lr~~ia~~~~~~~g~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~v~~~~ 146 (398)
T PRK08363 72 LPELREAIVKREKRKNGVDITPD--DVRVTAAVTEALQLIFGAL-LDPGDEILIPGPSYPP--YTGLVKFYGGVPVEYRT 146 (398)
T ss_pred cHHHHHHHHHHHHHhcCCCCChh--hEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCCcc--hHHHHHHcCCEEEEecc
Confidence 456788888876 3 5555 7999999999999999888 67899865 3434332 233455568777766 4
Q ss_pred CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccH---HHHH-HHHhCCcEEEecccccCcCC---ccCC-
Q 035915 230 EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSM---HWIS-EAHRNSWHVLLDATALVVGE---DRLN- 299 (344)
Q Consensus 230 ~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl---~~Ia-~ar~~g~~vlvDAaQa~~G~---~~LD- 299 (344)
.+..+..++.++|++.+++ +++++.+...+| |..++. +.|. .++++|+++++|.+..- -. ....
T Consensus 147 ~~~~~~~~d~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~-~~~~~~~~~~ 220 (398)
T PRK08363 147 IEEEGWQPDIDDIRKKITE-----KTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDL-MTYEGKHVSP 220 (398)
T ss_pred ccccCCcCCHHHHHhhCCc-----ceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhh-hccCCcccCH
Confidence 4433345788888887754 367777776666 999994 4443 35889999999998653 11 0111
Q ss_pred --CCCCCCcEEEEccccCCCCCCC-ceEEEEE
Q 035915 300 --LALHRPDFVLCNLDNTQNAQPS-KITCLLI 328 (344)
Q Consensus 300 --Ls~l~~DFvv~S~HK~l~G~P~-GiG~L~V 328 (344)
+....--+++.|+.|+ |+.|. ++|++++
T Consensus 221 ~~~~~~~~vi~~~SfSK~-~~~~GlRiG~~~~ 251 (398)
T PRK08363 221 GSLTKDVPVIVMNGLSKV-YFATGWRLGYIYF 251 (398)
T ss_pred HHcCcCCcEEEEecchhc-cCCccceEEEEEE
Confidence 1111113567899999 77663 5899988
No 175
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.07 E-value=1.4e-09 Score=105.90 Aligned_cols=166 Identities=13% Similarity=0.072 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCcc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLDLRI 237 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i 237 (344)
..+.|+.+|+++|+++++ +|++|+|+++++.+++..+ ..+|+.++... .....+...++..|++++.+|.+. +..+
T Consensus 65 ~~~lr~~ia~~~~~~~~~-~I~~t~G~~~~i~~~~~~~-~~~gd~vlv~~-P~y~~~~~~~~~~g~~~~~i~~~~-~~~~ 140 (356)
T PRK04870 65 AAALKAALRAAMGVPAGA-DVLLGNGSDELIQLLALAC-AKPGATVLAPE-PGFVMYRMSAKLAGLEFVGVPLTA-DFTL 140 (356)
T ss_pred HHHHHHHHHHHhCcCCCC-cEEEcCCHHHHHHHHHHHh-cCCCCEEEECC-CCHHHHHHHHHHcCCEEEEecCCC-CCCC
Confidence 367899999999987533 7999999999999998877 46899865331 112234555677899999999874 4578
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHH-HhCCcEEEecccccCcCCcc-C-CCCCCCCcEEEEcc
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEA-HRNSWHVLLDATALVVGEDR-L-NLALHRPDFVLCNL 312 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~a-r~~g~~vlvDAaQa~~G~~~-L-DLs~l~~DFvv~S~ 312 (344)
+.++|++.+... +++++.++.-+| |..+|.+.+.++ +..+.++++|.+........ + .+...+--+++.|+
T Consensus 141 d~~~l~~~~~~~----~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~~~S~ 216 (356)
T PRK04870 141 DLPAMLAAIAEH----RPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPNLLVMRTV 216 (356)
T ss_pred CHHHHHHHhhcC----CCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCCEEEEecc
Confidence 999999888542 467777765556 999999877654 44478899998764212111 1 12223335889999
Q ss_pred ccCCCCCCCc--eEEEEEeCCCcc
Q 035915 313 DNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 313 HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.|+ |.| | +|+++..++..+
T Consensus 217 SK~--~~~-GlRiG~~i~~~~~i~ 237 (356)
T PRK04870 217 SKL--GLA-GLRLGYLAGHPAWIA 237 (356)
T ss_pred hhh--hhH-HHhhhhhhCCHHHHH
Confidence 994 645 6 999988765543
No 176
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.07 E-value=5.9e-09 Score=106.31 Aligned_cols=182 Identities=14% Similarity=0.081 Sum_probs=117.6
Q ss_pred ccchHHH-HHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcC
Q 035915 132 TQLEPSR-LLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEE 210 (344)
Q Consensus 132 v~~~~~~-L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~ 210 (344)
+.+..++ |...+.|.-.|.|+..- .+-.++++++||.+ .+++|+++|.|++++. .+.+++||++.+ ..|
T Consensus 49 T~aMs~~q~a~~~~GDe~yag~~s~---~~lE~~va~~~G~~----~av~v~sGT~Al~ll~-~l~l~pGDeVps-n~~- 118 (450)
T TIGR02618 49 TNAMSDKQWAGLMMGDEAYAGSRNF---YHLERTVRELYGFK----YVVPTHQGRGAENLLS-QIAIKPGDYVPG-NMY- 118 (450)
T ss_pred cHHHHHHHHHHhhhcchhhcCCCcH---HHHHHHHHHHHCCC----eEEEcCCHHHHHHHHH-HhCCCCcCEECC-cee-
Confidence 3444455 66666677556555543 34455689999984 4999999999999864 556789998732 222
Q ss_pred HHHHHHHHHcCCcEEEEEeCC---------CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc---cccccH---HHHH
Q 035915 211 LDYVREFASFKESKVILAPEA---------WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN---GTRYSM---HWIS 275 (344)
Q Consensus 211 ~~~ir~la~~~G~kV~~vp~~---------~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN---G~i~Pl---~~Ia 275 (344)
......-....|+.+.-++.+ ..+|.++.++|++.++++. ...+.++++...+| |...|+ +.|.
T Consensus 119 f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~-~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~ 197 (450)
T TIGR02618 119 FTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG-ADKIPYICLAVTVNLAGGQPVSMANMREVR 197 (450)
T ss_pred HHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc-CcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence 112222123457755555332 2357899999999997531 11344555543344 788765 4444
Q ss_pred H-HHhCCcEEEecccccCcCCccC---------CCCC--------CCCcEEEEccccCCCCCCCceEEEEE
Q 035915 276 E-AHRNSWHVLLDATALVVGEDRL---------NLAL--------HRPDFVLCNLDNTQNAQPSKITCLLI 328 (344)
Q Consensus 276 ~-ar~~g~~vlvDAaQa~~G~~~L---------DLs~--------l~~DFvv~S~HK~l~G~P~GiG~L~V 328 (344)
+ |+++|+.+|+|||+++ |..-+ +.+- -.+|.+++|+||- +++|. |.+++
T Consensus 198 elA~~~Gl~vi~DaAR~~-gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd-~~~~~--GG~l~ 264 (450)
T TIGR02618 198 ELCEAHGIKVFYDATRCV-ENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSGKKD-CLVNI--GGFLC 264 (450)
T ss_pred HHHHHcCCEEEEEccchh-hChhhhhcccccccCCCHHHHHHHHhccCcEEEEeeccC-CCCCC--ceEEE
Confidence 3 5889999999999999 75221 1110 2589999999999 88884 55555
No 177
>PRK07683 aminotransferase A; Validated
Probab=99.06 E-value=5.3e-09 Score=103.40 Aligned_cols=165 Identities=12% Similarity=0.069 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC----GL--PDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L----ga--~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.+++++ |. +++ .+|++|+|+|+|+.+++..+ +.+|+.|+.. ..+. + ....++..|++++.+|.
T Consensus 67 ~~~lr~~ia~~l~~~~g~~~~~~-~~I~~t~G~~~al~~~~~~l-~~~gd~Vl~~~p~y~-~-~~~~~~~~g~~~~~~~~ 142 (387)
T PRK07683 67 LLELRKAACNFVKDKYDLHYSPE-SEIIVTIGASEAIDIAFRTI-LEPGTEVILPAPIYP-G-YEPIIRLCGAKPVFIDT 142 (387)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCC-CcEEEeCChHHHHHHHHHHh-CCCCCEEEEcCCCcc-c-hHHHHHHcCCEEEEeec
Confidence 456788888877 43 443 15999999999999999887 5789986532 2222 1 23334556999999988
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHH----HHHHhCCcEEEecccccCcCC---ccCCCC
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWI----SEAHRNSWHVLLDATALVVGE---DRLNLA 301 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~I----a~ar~~g~~vlvDAaQa~~G~---~~LDLs 301 (344)
+..+..++.+++++.+++ +++++.++..+| |..++.+.+ ..++++|+++++|.+..- .. ....+.
T Consensus 143 ~~~~~~~~~~~l~~~~~~-----~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~-~~~~~~~~~~~ 216 (387)
T PRK07683 143 RSTGFRLTAEALENAITE-----KTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSE-LVYEQPHTSIA 216 (387)
T ss_pred CcccCCCCHHHHHHhcCc-----CceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccccc-ceeCCCcCChh
Confidence 654445677888887764 367787776666 999986433 335889999999999874 21 112222
Q ss_pred CC----CCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 302 LH----RPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 302 ~l----~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.+ +-.+++.|+=|. ||.| | +|++++.+++.+
T Consensus 217 ~~~~~~~~vi~~~s~SK~-~~~p-GlRiG~i~~~~~l~~ 253 (387)
T PRK07683 217 HFPEMREKTIVINGLSKS-HSMT-GWRIGFLFAPSYLAK 253 (387)
T ss_pred hccCCcCCeEEEeecccc-ccCc-cceeEEEEcCHHHHH
Confidence 22 235889999999 8877 6 899988765443
No 178
>PRK07550 hypothetical protein; Provisional
Probab=99.04 E-value=1.2e-08 Score=100.51 Aligned_cols=165 Identities=13% Similarity=0.065 Sum_probs=107.8
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 159 IQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 159 e~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+.|+.+++++ | ++++ +|++|+|+++|+.+++..+ ..+||.|+.. ..+. + ....++..|++++.++.+
T Consensus 70 ~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~-~-~~~~~~~~g~~~~~v~~~ 144 (386)
T PRK07550 70 PELREAYAAHYSRLYGAAISPE--QVHITSGCNQAFWAAMVTL-AGAGDEVILPLPWYF-N-HKMWLDMLGIRPVYLPCD 144 (386)
T ss_pred HHHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHHHHHHHh-cCCCCEEEEcCCCCc-c-hHHHHHhcCCEEEEEecC
Confidence 44555555555 4 4444 7999999999999999988 4689986533 2222 1 122345579999999986
Q ss_pred C-CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHH---HHH-HHHhCCcEEEecccccCc---CCccCCCC
Q 035915 232 W-LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMH---WIS-EAHRNSWHVLLDATALVV---GEDRLNLA 301 (344)
Q Consensus 232 ~-~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~---~Ia-~ar~~g~~vlvDAaQa~~---G~~~LDLs 301 (344)
. .+..++.++|++.++. +++++.+..-+| |.++|.+ .|. .++++|+++++|.+.+-. +..+..+.
T Consensus 145 ~~~~~~~~~~~l~~~~~~-----~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~ 219 (386)
T PRK07550 145 EGPGLLPDPAAAEALITP-----RTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLF 219 (386)
T ss_pred CCcCCCCCHHHHHHHhcc-----cCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchh
Confidence 3 2345688889888864 355655554556 9999964 343 358899999999986520 11111111
Q ss_pred -C--CC-CcEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 302 -L--HR-PDFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 302 -~--l~-~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
. .+ -.+++.|+.|. ||.|. ++|+++..++..+
T Consensus 220 ~~~~~~~~~i~~~S~SK~-~g~~G~RiG~i~~~~~~~~ 256 (386)
T PRK07550 220 ADPDWDDTLVHLYSFSKS-YALTGHRVGAVVASPARIA 256 (386)
T ss_pred hCCCccccEEEEecchhh-ccCcccceEeeecCHHHHH
Confidence 1 11 24678999998 87562 3999988765543
No 179
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.04 E-value=6.1e-10 Score=107.66 Aligned_cols=188 Identities=15% Similarity=0.140 Sum_probs=121.5
Q ss_pred cchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHH
Q 035915 133 QLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELD 212 (344)
Q Consensus 133 ~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~ 212 (344)
.+..+.+.....+...|.. ....++++++|+++||.+ ..+|++++|.|..+++..+. ++++.++....-|..
T Consensus 9 ~~m~~a~~~a~~gd~~Yg~---D~~~~~l~~~i~~l~g~e----~a~f~~sGT~An~~al~~~~-~~~~~vi~~~~aHi~ 80 (290)
T PF01212_consen 9 PAMLEAMAAANVGDDAYGE---DPTTARLEERIAELFGKE----AALFVPSGTMANQLALRAHL-RPGESVICADTAHIH 80 (290)
T ss_dssp HHEEHHHHHTTSB-CCTTS---SHHHHHHHHHHHHHHTSS----EEEEESSHHHHHHHHHHHHH-HTTEEEEEETTEHHH
T ss_pred HHHHHHHHccccCCcccCC---ChhHHHHHHHHHHHcCCC----EEEEeCCCChHHHHHHHHHH-hcCCceeccccceee
Confidence 3344445444444433322 335678899999999984 46899999999999888775 567776544332211
Q ss_pred --HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCC-CCCeeEEEEeCccc---cccccHHHHHH----HHhCCc
Q 035915 213 --YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCK-HTPKGLFSYPADIN---GTRYSMHWISE----AHRNSW 282 (344)
Q Consensus 213 --~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~-~~~t~LVa~~avSN---G~i~Pl~~Ia~----ar~~g~ 282 (344)
.-...+...|+++..++.+. +|.++.++|++.+..... ..++++|+++..+| |++++++++.+ ||++|+
T Consensus 81 ~~E~ga~~~~~G~~~~~l~~~~-~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl 159 (290)
T PF01212_consen 81 FDETGAIEELSGAKLIPLPSDD-DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGL 159 (290)
T ss_dssp HSSTTHHHHHTTCEEEEEBECT-GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-
T ss_pred eeccchhhHhcCcEEEECCCcc-cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCce
Confidence 00112223699999888653 389999999999876321 13578999997765 99999987754 488999
Q ss_pred EEEeccccc------CcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 283 HVLLDATAL------VVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 283 ~vlvDAaQa------~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
.+|+|+|=. . +...-++. ..+|.+++|++|- +|.| +=++|..+++.+
T Consensus 160 ~lhmDGARl~~a~~~~-~~~~~e~~-~~~D~v~~~~tK~-~g~~-~Gavl~~~~~~i 212 (290)
T PF01212_consen 160 PLHMDGARLANAAAAL-GVSLAEIA-AGADSVSFGGTKN-GGAP-GGAVLAGNKEFI 212 (290)
T ss_dssp EEEEEETTHHHHHCHH-HHHHHHHH-TTSSEEEEETTST-T-SS-SEEEEEESHHHH
T ss_pred EEEEehhhHHHhhhcc-cccHHHHh-hhCCEEEEEEEcc-cccc-cceEEEechHHH
Confidence 999999932 3 33333333 4799999999998 7767 445666666543
No 180
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.04 E-value=6.8e-09 Score=105.57 Aligned_cols=177 Identities=15% Similarity=0.086 Sum_probs=118.4
Q ss_pred HHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHH
Q 035915 139 LLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFA 218 (344)
Q Consensus 139 L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la 218 (344)
|..++.+..+|.++.- +.+.|+.|++++|.+ .+++|+|+|+|+.++...+ .++||++++.. +....+...
T Consensus 39 ~~a~~~gd~~Y~~~~g---~~~Leeaia~~~g~~----~vv~t~~Gt~Al~la~~al-~~pGD~V~~~~--~f~~~~~~i 108 (431)
T cd00617 39 WAAMMLGDEAYAGSKS---FYDLEDAVQDLFGFK----HIIPTHQGRGAENILFSIL-LKPGRTVPSNM--HFDTTRGHI 108 (431)
T ss_pred HHHHHhCCCccCCCCC---HHHHHHHHHHHHCCC----eEEEcCCHHHHHHHHHHHh-CCCCCEEccCC--cccchHHHH
Confidence 4444556655655443 345777899999984 5999999999999988877 67899875321 111112223
Q ss_pred HcCCcEEEEEeCCCC---------CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc---cccccHHHH---H-HHHhCCc
Q 035915 219 SFKESKVILAPEAWL---------DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN---GTRYSMHWI---S-EAHRNSW 282 (344)
Q Consensus 219 ~~~G~kV~~vp~~~~---------~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN---G~i~Pl~~I---a-~ar~~g~ 282 (344)
...|++.+.++.+.. .+.+|.++|++.++++. ..++++|.+...+| |...+++.+ . .|+++|+
T Consensus 109 ~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~-~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi 187 (431)
T cd00617 109 EANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVG-AENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGI 187 (431)
T ss_pred HhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCccc-CCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 446888888877521 35689999999997531 12366776654444 888887654 3 3589999
Q ss_pred EEEecccccCcCCc-----------cCCCCC------CCCcEEEEccccCCCCCCCceE-EEEEeC
Q 035915 283 HVLLDATALVVGED-----------RLNLAL------HRPDFVLCNLDNTQNAQPSKIT-CLLIRK 330 (344)
Q Consensus 283 ~vlvDAaQa~~G~~-----------~LDLs~------l~~DFvv~S~HK~l~G~P~GiG-~L~Vr~ 330 (344)
+++.|++|++ +.. ...+.+ ...|.+++|+||- ++.| +| +++.++
T Consensus 188 ~li~DaAr~~-~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~-~~~~--~GG~i~~~d 249 (431)
T cd00617 188 PVVLDAARFA-ENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKD-GLVN--IGGFLALRD 249 (431)
T ss_pred EEEEEchhhH-hhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecC-CCCc--cceEEEeCc
Confidence 9999999986 421 112211 1489999999997 5555 46 455554
No 181
>PRK07777 aminotransferase; Validated
Probab=99.04 E-value=1.7e-08 Score=99.45 Aligned_cols=164 Identities=13% Similarity=0.024 Sum_probs=108.7
Q ss_pred HHHHHHHH----HcCCC--CCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCC
Q 035915 160 QARNKVLK----HCGLP--DDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 160 ~AR~~IA~----~Lga~--p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~ 232 (344)
+.|+.+++ .+|.+ +++ +|++|+|+|+|+.+++.++ ..+||.++. ...|+. ....++..|.+++.+|.+.
T Consensus 65 ~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~al~~~~~~~-~~~gd~vli~~p~y~~--~~~~~~~~g~~~~~~~~~~ 140 (387)
T PRK07777 65 ELRAAIAAQRRRRYGLEYDPDT-EVLVTVGATEAIAAAVLGL-VEPGDEVLLIEPYYDS--YAAVIAMAGAHRVPVPLVP 140 (387)
T ss_pred HHHHHHHHHHHHHhCCCCCCCC-cEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchh--hHHHHHHCCCEEEEeecCC
Confidence 34555554 45654 332 5999999999999988877 468888653 333331 2233445688888888764
Q ss_pred C--CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHH----HHHHhCCcEEEecccccCc---CC--ccCC
Q 035915 233 L--DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWI----SEAHRNSWHVLLDATALVV---GE--DRLN 299 (344)
Q Consensus 233 ~--~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~I----a~ar~~g~~vlvDAaQa~~---G~--~~LD 299 (344)
. +..++.++|++.+++ ++++|.++..+| |..++.+.+ ..++++++++++|-+..-. +. .++.
T Consensus 141 ~~~~~~~d~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~ 215 (387)
T PRK07777 141 DGRGFALDLDALRAAVTP-----RTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLA 215 (387)
T ss_pred ccCCCcCCHHHHHHhcCc-----ccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHh
Confidence 2 234788999888764 367777765556 999886433 3458899999999887530 11 1221
Q ss_pred -CCC-CCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 300 -LAL-HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 300 -Ls~-l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+.. .+.++++.|+.|. ||.| | +|+++..+++.+
T Consensus 216 ~~~~~~~~~i~~~S~SK~-~g~~-GlRiG~~~~~~~l~~ 252 (387)
T PRK07777 216 TLPGMRERTVTISSAAKT-FNVT-GWKIGWACGPAPLIA 252 (387)
T ss_pred hCCCCcCcEEEEeechhh-ccCc-CceeEEEecCHHHHH
Confidence 111 3468999999999 8866 7 798888765543
No 182
>PRK07682 hypothetical protein; Validated
Probab=99.04 E-value=3.4e-09 Score=103.91 Aligned_cols=166 Identities=7% Similarity=0.021 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHCG------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~Lg------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.+|++++ +++++ +|++|+|+++|+.+++.++ .++|+.++ ....|+ .....++..|.++..++.
T Consensus 59 ~~~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~al~~~~~~l-~~~gd~vl~~~p~y~--~~~~~~~~~g~~~~~~~~ 134 (378)
T PRK07682 59 LLELRQEIAKYLKKRFAVSYDPND-EIIVTVGASQALDVAMRAI-INPGDEVLIVEPSFV--SYAPLVTLAGGVPVPVAT 134 (378)
T ss_pred cHHHHHHHHHHHHHHhCCCCCCCC-cEEEeCChHHHHHHHHHHh-CCCCCEEEEeCCCch--hhHHHHHHcCCEEEEeec
Confidence 4567777887774 34432 6999999999999999887 57899865 344443 123334556888888886
Q ss_pred CCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHH---H-HHHhCCcEEEecccccCcCCc---c---
Q 035915 231 AWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWI---S-EAHRNSWHVLLDATALVVGED---R--- 297 (344)
Q Consensus 231 ~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~I---a-~ar~~g~~vlvDAaQa~~G~~---~--- 297 (344)
+.. +..++.+.|++.+.+ +++++.+..-+| |..+|.+.+ . .|+++++++++|.++.- ... .
T Consensus 135 ~~~~~~~~d~~~l~~~~~~-----~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~-~~~~~~~~~~ 208 (378)
T PRK07682 135 TLENEFKVQPAQIEAAITA-----KTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAE-LTYDEAYTSF 208 (378)
T ss_pred CCccCCCCCHHHHHhhcCc-----ccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhh-cccCCCCCCh
Confidence 532 245788999888764 356666654455 999986433 3 35789999999999774 221 0
Q ss_pred CCCCC-CCCcEEEEccccCCCCCCCc--eEEEEEeCCCccc
Q 035915 298 LNLAL-HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFDT 335 (344)
Q Consensus 298 LDLs~-l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~~ 335 (344)
..+.. ..-.+++.|+-|. ||.| | +|+++..+++.+.
T Consensus 209 ~~~~~~~~~~i~~~S~SK~-~~~~-GlR~G~~~~~~~~i~~ 247 (378)
T PRK07682 209 ASIKGMRERTILISGFSKG-FAMT-GWRLGFIAAPVYFSEA 247 (378)
T ss_pred hhcccccCCEEEEecCccc-ccCh-hhhhhhhhcCHHHHHH
Confidence 11111 1346889999999 8866 7 9999987765543
No 183
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.03 E-value=1e-08 Score=104.35 Aligned_cols=155 Identities=10% Similarity=-0.026 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC-H-HHHHHHHHcCCcEEEEEeCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE-L-DYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~-~-~~ir~la~~~G~kV~~vp~~~ 232 (344)
..++.-.+.+|++.|+. ..+.|+|++.|+.+++.++ +++||+|++ ...+. . ..+.....+.|+++.++..
T Consensus 61 Ptv~~lE~~la~leg~~----~av~~~SG~aAi~~al~al-l~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~-- 133 (432)
T PRK06702 61 PTLAAFEQKLAELEGGV----GAVATASGQAAIMLAVLNI-CSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP-- 133 (432)
T ss_pred cHHHHHHHHHHHHhCCC----cEEEECCHHHHHHHHHHHh-cCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC--
Confidence 35677788899999984 2688999999999988877 689999764 43343 1 2223334667999988853
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEE
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVL 309 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv 309 (344)
.++.+++++++++ +|++|.+...+| +.++|++.|.+ ||++|+.+++|++-+. +.. .+.-++++|.++
T Consensus 134 ---~~d~~~l~~~I~~-----~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD~T~~t-P~~-~~pl~~GADIvv 203 (432)
T PRK06702 134 ---NLTADEIVALAND-----KTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLAT-PYL-CQAFEHGANIIV 203 (432)
T ss_pred ---CCCHHHHHHhCCc-----CCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEECCCCc-hhh-CChhhcCCCEEE
Confidence 3567889999876 367777765566 99999988865 6999999999999765 311 122257899999
Q ss_pred EccccCCCCCCC-ceEEEEE
Q 035915 310 CNLDNTQNAQPS-KITCLLI 328 (344)
Q Consensus 310 ~S~HK~l~G~P~-GiG~L~V 328 (344)
-|+-|+ ++|.. ++|.+++
T Consensus 204 ~S~TKy-~~Ghsd~l~G~v~ 222 (432)
T PRK06702 204 HSTTKY-IDGHASSLGGIVI 222 (432)
T ss_pred Eccccc-cCCCcceeceEEE
Confidence 999999 77765 5666665
No 184
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.03 E-value=9.9e-09 Score=102.11 Aligned_cols=157 Identities=12% Similarity=0.098 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCC-CCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPF-FRGNFYMT-IIGEELDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~-~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
..++.++++|+++|++ . .++|++|+ +|+..+...+.. .+|+.|++ ..+|... +.. .+..|.++..++..
T Consensus 91 ~~~~le~~la~~~g~~-~--~~~~~SG~-~An~~ai~~l~~~~~g~~I~~~~~~H~s~-~~~-~~~~g~~~~~~~~~--- 161 (406)
T PRK13393 91 YHVLLEAELADLHGKE-A--ALLFTSGY-VSNWAALSTLGSRLPGCVILSDELNHASM-IEG-IRHSRAEKRIFRHN--- 161 (406)
T ss_pred HHHHHHHHHHHHhCCC-c--EEEeCCcH-HHHHHHHHHhhcCCCCCEEEEccchhHHH-HHH-HHHcCCeEEEeCCC---
Confidence 5688899999999973 2 57777665 566665554432 25777665 4555521 111 23357777776642
Q ss_pred CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCC-ccC--------CCCC
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGE-DRL--------NLAL 302 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~-~~L--------DLs~ 302 (344)
+.+++++.+... ...++++|++.+++| |.++|++.|.+ ++++|+++++|.+|++ |. .+. ++.
T Consensus 162 ---d~~~l~~~l~~~-~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~-g~~g~~G~g~~~~~~~~- 235 (406)
T PRK13393 162 ---DPADLERKLSDL-DPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAV-GLYGPRGGGIAEREGLA- 235 (406)
T ss_pred ---CHHHHHHHHHhc-cCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccc-cccCCCCCchhhhcCCC-
Confidence 345666666421 112468888887775 99999988865 6899999999999996 65 221 111
Q ss_pred CCCcEEEEccccCCCCCCCceEEEEEeCC
Q 035915 303 HRPDFVLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
.++|.++.++=|. ||.+ | |+++.+++
T Consensus 236 ~~~~i~~~tlsKa-~g~~-G-G~~~~~~~ 261 (406)
T PRK13393 236 DRLTIIEGTLAKA-FGVM-G-GYITGSAA 261 (406)
T ss_pred CCCeEEEEeCchh-hccc-C-ceeeCCHH
Confidence 2368888999999 8854 4 66654443
No 185
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.03 E-value=1.3e-08 Score=100.87 Aligned_cols=195 Identities=12% Similarity=0.076 Sum_probs=116.7
Q ss_pred CCCcCCCCCCcccccchHHHHHHhhccCCCChh-hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC-
Q 035915 119 TPSFGSNLPDLDRTQLEPSRLLDILTKKSSFPG-SFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP- 196 (344)
Q Consensus 119 ~~~~Ga~lp~~s~v~~~~~~L~~~L~gnss~~g-~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~- 196 (344)
.+|.|-. +....+++..+.+...-.+.+.+.. ........+.++++++++|.+ + .+|++++++|+..++..+.
T Consensus 53 n~ylgl~-~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~-~---~l~~~sG~~an~~ai~~l~~ 127 (402)
T TIGR01821 53 NDYLGMG-QHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKE-S---ALVFTSGYVANDATLATLAK 127 (402)
T ss_pred cCcCCCC-CCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCC-e---EEEECchHHHHHHHHHHhhC
Confidence 4455655 2222444445555443222221111 112335688999999999963 2 4555556888776666543
Q ss_pred CCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHH
Q 035915 197 FFRGNFYMTI-IGEELDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHW 273 (344)
Q Consensus 197 ~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~ 273 (344)
+.+++.+++. ..|... +. -++..|+++..++.. +.+++++.++.. ....+++|.+...+| |.+.|++.
T Consensus 128 ~~~~~~v~~~~~~h~s~-~~-~~~~~g~~~~~~~~~------d~~~l~~~l~~~-~~~~~~~v~~e~~~~~~G~~~~l~~ 198 (402)
T TIGR01821 128 IIPGCVIFSDELNHASM-IE-GIRHSGAEKFIFRHN------DVAHLEKLLQSV-DPNRPKIIAFESVYSMDGDIAPIEE 198 (402)
T ss_pred CCCCCEEEEcchHhHHH-HH-HHHHcCCeEEEECCC------CHHHHHHHHHhc-cCCCCeEEEEcCCCCCCCCccCHHH
Confidence 3357776654 444321 11 223457777655432 456677777531 112468888887765 99999987
Q ss_pred HHH-HHhCCcEEEecccccCcCCc-cC--------CCCCCCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 274 ISE-AHRNSWHVLLDATALVVGED-RL--------NLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 274 Ia~-ar~~g~~vlvDAaQa~~G~~-~L--------DLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
|.+ ++++|+++++|.+|++ |.. +. ++. .++|+++.++-|. ||.+ | |+++.+++.
T Consensus 199 i~~l~~~~~~~livDea~~~-G~~g~~g~g~~~~~~~~-~~~div~~t~sKa-~g~~-G-G~i~~~~~~ 262 (402)
T TIGR01821 199 ICDLADKYGALTYLDEVHAV-GLYGPRGGGIAERDGLM-HRIDIIEGTLAKA-FGVV-G-GYIAASRKL 262 (402)
T ss_pred HHHHHHHcCCEEEEeCcccc-cccCCCCCccchhccCC-CCCeEEEEechhh-hccC-C-ceeecCHHH
Confidence 764 6899999999999997 642 11 111 2479999999999 8854 4 656555443
No 186
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.02 E-value=1.2e-08 Score=101.15 Aligned_cols=162 Identities=10% Similarity=0.038 Sum_probs=102.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC-CCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCC
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY-PFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl-~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~ 233 (344)
.....+.++++|+++|.+ + .++|++| ++|+..++..+ .+.+++.+++..-||...+.. ++..|+++..++.+
T Consensus 90 ~~~~~~l~~~la~~~g~~-~--~~~~~sG-~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~-~~~~~~~~~~~~~~-- 162 (407)
T PRK09064 90 NHYHVELERELADLHGKE-A--ALVFTSG-YVSNDATLSTLAKLIPDCVIFSDELNHASMIEG-IRRSRCEKHIFRHN-- 162 (407)
T ss_pred HHHHHHHHHHHHHHhCCC-c--EEEECcH-HHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHH-HHHcCCcEEEECCC--
Confidence 345688999999999952 3 4666665 45544433332 234566666554344222222 23346666555432
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCc-c--------CCCC
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGED-R--------LNLA 301 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~-~--------LDLs 301 (344)
+.++|++.++.. ...++++|.+..+.| |.+.|++.|.+ ++++|+++++|.+|+. |.. + .++.
T Consensus 163 ----d~~~le~~l~~~-~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~-G~~g~~g~g~~~~~~~~ 236 (407)
T PRK09064 163 ----DVAHLEELLAAA-DPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAV-GMYGPRGGGIAERDGLM 236 (407)
T ss_pred ----CHHHHHHHHHhc-cCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcc-cccCCCCCChHHhcCCC
Confidence 456777777531 112467888887765 99999988765 6899999999999986 542 1 1221
Q ss_pred CCCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 302 LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 302 ~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
..+|+++.++.|. ||. .| |+++.+++..
T Consensus 237 -~~~div~~t~sKa-~g~-~G-G~~~~~~~~~ 264 (407)
T PRK09064 237 -DRIDIIEGTLAKA-FGV-MG-GYIAGSAALV 264 (407)
T ss_pred -CCCeEEEEecchh-hhc-cC-ceEecCHHHH
Confidence 2579999999999 884 45 7776665543
No 187
>PLN00175 aminotransferase family protein; Provisional
Probab=99.02 E-value=2.2e-08 Score=100.42 Aligned_cols=164 Identities=12% Similarity=0.055 Sum_probs=111.9
Q ss_pred HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCC
Q 035915 160 QARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 160 ~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~ 232 (344)
+.|+.+++++ | +++++ +|++|+|+|+|+.+++.++ +.+||.|+. .-.|. .+...++..|++++.+|.+.
T Consensus 95 ~Lr~aia~~~~~~~g~~~~~~~-~I~vt~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~--~~~~~~~~~g~~~~~v~~~~ 170 (413)
T PLN00175 95 ELNSAIAERFKKDTGLVVDPEK-EVTVTSGCTEAIAATILGL-INPGDEVILFAPFYD--SYEATLSMAGAKIKTVTLRP 170 (413)
T ss_pred HHHHHHHHHHHHHhCCCCCCCC-CEEEeCCHHHHHHHHHHHh-CCCCCEEEEeCCCch--hHHHHHHHcCCEEEEEECCc
Confidence 3555565554 4 34432 5999999999999988877 578998653 33322 23333455799999999864
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcCC---ccCCCCC-
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVGE---DRLNLAL- 302 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~---~~LDLs~- 302 (344)
.+..++.++|++.+.+ +++++.++.-+| |..++.+.+. .++++++++++|-+..- -. ....+..
T Consensus 171 ~~~~~~~~~l~~~~~~-----~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~-l~~~~~~~s~~~~ 244 (413)
T PLN00175 171 PDFAVPEDELKAAFTS-----KTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDK-LAFEGDHISMASL 244 (413)
T ss_pred ccCCCCHHHHHHhcCc-----CceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCc-cccCCcccChhhC
Confidence 4456788999988865 367887776666 9999875433 35889999999998754 21 1112211
Q ss_pred ---CCCcEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 303 ---HRPDFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 303 ---l~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
.+..+++.|+=|. ||.|. .+|.++..+++.+
T Consensus 245 ~~~~~~vi~i~SfSK~-~~~~G~RiG~~v~~~~l~~ 279 (413)
T PLN00175 245 PGMYERTVTMNSLGKT-FSLTGWKIGWAIAPPHLTW 279 (413)
T ss_pred CCCcCcEEEEecchhh-ccCcchheeeeEeCHHHHH
Confidence 2345888999999 88672 3899988765544
No 188
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.02 E-value=3.8e-09 Score=102.70 Aligned_cols=163 Identities=13% Similarity=0.120 Sum_probs=114.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAWLDL 235 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~~~g 235 (344)
-..+.|+.|++++|++++ +|++|+|+++++++++..+ +|+.++ ..-.+. .+...++..|++++.++.+. +.
T Consensus 56 g~~~lr~~ia~~~~~~~~--~I~~t~G~~~~l~~~~~~~---~gd~V~v~~P~y~--~~~~~~~~~g~~~~~v~~~~-~~ 127 (337)
T PRK03967 56 TSDPLREAIAEFYGLDAE--NIAVGNGSDELISYLVKLF---EGKHIVITPPTFG--MYSFYAKLNGIPVIDVPLKE-DF 127 (337)
T ss_pred CHHHHHHHHHHHhCcCcc--eEEEcCCHHHHHHHHHHHh---CCCeEEEeCCChH--HHHHHHHHcCCeEEEeecCC-CC
Confidence 356799999999999876 7999999999999998876 588765 333332 23445566799999998864 35
Q ss_pred ccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHhCCcEEEecccccCc-CCccCCC-CCCCCcEEEEc
Q 035915 236 RIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHRNSWHVLLDATALVV-GEDRLNL-ALHRPDFVLCN 311 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~g~~vlvDAaQa~~-G~~~LDL-s~l~~DFvv~S 311 (344)
.++.+.+++.+. +++++.++.-+| |..+|.+.+.++-++++++++|.+..-. +...+.+ ....--+++.|
T Consensus 128 ~~d~~~l~~~~~------~~~~v~~~~P~NPtG~~~~~~~l~~i~~~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l~S 201 (337)
T PRK03967 128 TIDGERIAEKAK------NASAVFICSPNNPTGNLQPEEEILKVLETGKPVVLDEAYAEFSGKSLIGLIDEYPNLILLRT 201 (337)
T ss_pred CcCHHHHHHhcc------CCCEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECchhhhcccchHHHHhhCCCEEEEec
Confidence 678888876542 355666765556 9999998776654579999999987621 2111111 11112367799
Q ss_pred cccCCCCCCC-ceEEEEEeCCCcc
Q 035915 312 LDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 312 ~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
+=|. ||.|. .+|++++.++..+
T Consensus 202 ~SK~-~~l~GlRiG~iv~~~~~i~ 224 (337)
T PRK03967 202 FSKA-FGLAGIRAGYAIANEEIID 224 (337)
T ss_pred chHh-hcchhhhheeeecCHHHHH
Confidence 9999 88662 4899998765543
No 189
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.01 E-value=8.1e-09 Score=106.43 Aligned_cols=160 Identities=12% Similarity=0.097 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC------GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L------ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
+.+.|+.||+++ +++++ +|++|+|+++++++++.++ +.+||+|+ ..-.+.. +...++..|++++.++.
T Consensus 187 ~~~lReaia~~~~~~~~~~~~~~--~I~it~G~~eal~~~~~~l-~~~Gd~Vli~~P~y~~--y~~~~~~~g~~~v~~~~ 261 (517)
T PRK13355 187 LFSARKAIMQYAQLKGLPNVDVD--DIYTGNGVSELINLSMSAL-LDDGDEVLIPSPDYPL--WTACVNLAGGTAVHYRC 261 (517)
T ss_pred hHHHHHHHHHHHHhcCCCCCChh--HEEEeCcHHHHHHHHHHHh-CCCCCEEEEcCCCCcC--HHHHHHHCCCEEEEeec
Confidence 567899999998 67776 7999999999999999887 57899865 4444442 23344556899888887
Q ss_pred CCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHH---H-HHHHhCCcEEEecccccCc---CCccCCC
Q 035915 231 AWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHW---I-SEAHRNSWHVLLDATALVV---GEDRLNL 300 (344)
Q Consensus 231 ~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~---I-a~ar~~g~~vlvDAaQa~~---G~~~LDL 300 (344)
+.. +..++.++|++.+++ +++++.+..-+| |.+++.+. | ..|+++++++++|-+-.-. |.....+
T Consensus 262 ~~~~~~~~d~~~l~~~~~~-----~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~ 336 (517)
T PRK13355 262 DEQSEWYPDIDDIRSKITS-----RTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSI 336 (517)
T ss_pred CcccCCCCCHHHHHHhcCc-----CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccH
Confidence 542 235788999888765 366666665556 99999543 3 3458899999999985420 2211222
Q ss_pred CCCCCcE--E-EEccccCCCCCCCc--eEEEEEe
Q 035915 301 ALHRPDF--V-LCNLDNTQNAQPSK--ITCLLIR 329 (344)
Q Consensus 301 s~l~~DF--v-v~S~HK~l~G~P~G--iG~L~Vr 329 (344)
..+..|. + +.|+-|. |+.| | +|.+++.
T Consensus 337 ~~~~~~~~vi~~~S~SK~-~~~~-G~RiG~~i~~ 368 (517)
T PRK13355 337 ASLAPDLFCVTFSGLSKS-HMIA-GYRIGWMILS 368 (517)
T ss_pred HHhCCCCeEEEEecchhh-ccCc-ccceEEEEee
Confidence 2233453 2 3678998 8755 6 8998864
No 190
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.00 E-value=2.1e-08 Score=102.61 Aligned_cols=178 Identities=13% Similarity=0.061 Sum_probs=110.2
Q ss_pred HHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHH
Q 035915 139 LLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFA 218 (344)
Q Consensus 139 L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la 218 (344)
|..++.|.-.|.|+..-.. -.+.+++++|.+ .+++|+++|.|++++ ..+..++||++ +...|- ...+.-.
T Consensus 64 ~a~~~vGDd~Yagd~s~~~---LE~~vAe~lG~e----~aV~v~sGTaAl~ll-~~l~v~pGd~V-p~n~~f-~Tt~ahI 133 (460)
T PRK13237 64 WAGMMIGDEAYAGSRNFYH---LEETVQEYYGFK----HVVPTHQGRGAENLL-SRIAIKPGQYV-PGNMYF-TTTRYHQ 133 (460)
T ss_pred HHHHhhcchhhcCCCcHHH---HHHHHHHHHCCC----eEEEeCCHHHHHHHH-HHhCCCCcCEE-CCccch-HhhHHHH
Confidence 4444556654555443333 455689999984 399999999999986 44557889975 222222 1122212
Q ss_pred HcCCcEEEEEeC---------CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc---cccccH---HHHHH-HHhCCc
Q 035915 219 SFKESKVILAPE---------AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN---GTRYSM---HWISE-AHRNSW 282 (344)
Q Consensus 219 ~~~G~kV~~vp~---------~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN---G~i~Pl---~~Ia~-ar~~g~ 282 (344)
...|+.+.-++. +..++.+|.++|++.++++. ..++.|+++...+| |...|+ +.|.+ |+++|+
T Consensus 134 ~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~-~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl 212 (460)
T PRK13237 134 ELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG-AENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGI 212 (460)
T ss_pred HhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhcccc-CCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCC
Confidence 335664443321 12357899999999997532 12455555544444 677654 55544 589999
Q ss_pred EEEecccccCcCCc-----------cCCCC------CCCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 283 HVLLDATALVVGED-----------RLNLA------LHRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 283 ~vlvDAaQa~~G~~-----------~LDLs------~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
.+|.||||++ |.. .-++. -...|.+++|+||- ++.|. =|++..++
T Consensus 213 ~Vi~DaAra~-gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~-~~~~~-GG~i~t~D 274 (460)
T PRK13237 213 KVFFDATRCV-ENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKD-CLVNI-GGFLAMND 274 (460)
T ss_pred EEEEECcchh-cChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCC-CCCCC-ceEEEECC
Confidence 9999999999 822 11211 12489999999998 66563 24555554
No 191
>PRK06207 aspartate aminotransferase; Provisional
Probab=98.98 E-value=1.9e-08 Score=100.47 Aligned_cols=165 Identities=17% Similarity=0.166 Sum_probs=110.9
Q ss_pred HHHHHHHHHHcCC--CCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCC---
Q 035915 159 IQARNKVLKHCGL--PDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAW--- 232 (344)
Q Consensus 159 e~AR~~IA~~Lga--~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~--- 232 (344)
+...+.+++++|. +++ .+|++|+|+++++.+++..+ +.+||.|+ ..-.+.. ...+++..|++++.+|.+.
T Consensus 85 ~aia~~l~~~~g~~~~~~-~~I~it~Ga~~al~~~~~~l-~~~Gd~Vlv~~P~y~~--~~~~~~~~g~~v~~v~~~~~~~ 160 (405)
T PRK06207 85 ELLAARLAAFTGAPVDAA-DELIITPGTQGALFLAVAAT-VARGDKVAIVQPDYFA--NRKLVEFFEGEMVPVQLDYLSA 160 (405)
T ss_pred HHHHHHHHHHhCCCCCCC-CCEEEeCCcHHHHHHHHHHh-cCCCCEEEEeCCCchh--HHHHHHHcCCEEEEEeccccCc
Confidence 4444455555685 441 27999999999999999887 57899865 3333332 3445566799998888752
Q ss_pred -CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc---CCccCCCCC
Q 035915 233 -LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV---GEDRLNLAL 302 (344)
Q Consensus 233 -~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~---G~~~LDLs~ 302 (344)
.+..++.++|++++++ ++++|.+..-+| |.+++.+.+. .++++++++++|-+-.-. |.....+..
T Consensus 161 ~~~~~~d~~~l~~~~~~-----~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~ 235 (405)
T PRK06207 161 DKRAGLDLDQLEEAFKA-----GVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRA 235 (405)
T ss_pred ccCCCcCHHHHHHhhhh-----cCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhc
Confidence 1245788999988865 356666665556 9999975443 357899999999986631 211112222
Q ss_pred CCCc----EEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 303 HRPD----FVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 303 l~~D----Fvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+..| +++.|+-|. |+.| | +|.++..+++.+
T Consensus 236 ~~~~~~~vi~i~SfSK~-~~lp-GlRiG~ii~~~~l~~ 271 (405)
T PRK06207 236 LPIDPENVITIMGPSKT-ESLS-GYRLGVAFGSPAIID 271 (405)
T ss_pred CCCCcCcEEEEecchhh-ccCc-ccceEEEEcCHHHHH
Confidence 2222 889999999 8867 7 999887765543
No 192
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=98.97 E-value=3.6e-09 Score=103.39 Aligned_cols=162 Identities=10% Similarity=0.023 Sum_probs=113.3
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCC-CeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRG-NFYMT-IIGEELDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~G-d~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
.+.|+.+++++|++++ +|++|+|+++++.+++..+ ..+| +.++. .-.+. .....++..|++++.+|.+. +..
T Consensus 60 ~~l~~~~a~~~g~~~~--~I~~~~Gs~e~i~~~~~~~-~~~g~~~vli~~P~y~--~y~~~~~~~G~~~~~v~~~~-~~~ 133 (351)
T PRK01688 60 KAVIENYAAYAGVKPE--QVLVSRGADEGIELLIRAF-CEPGKDAILYCPPTYG--MYSVSAETIGVEIRTVPTLD-NWQ 133 (351)
T ss_pred HHHHHHHHHHhCCCHH--HEEEcCCHHHHHHHHHHHh-cCCCCCEEEEcCCCHH--HHHHHHHHcCCEEEEeecCC-CCC
Confidence 5688889999999887 7999999999999999987 4566 76543 33322 23455667899999998864 456
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHH-H--hCCcEEEecccccCc-CC-ccCCC-CCCCCcEE
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEA-H--RNSWHVLLDATALVV-GE-DRLNL-ALHRPDFV 308 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~a-r--~~g~~vlvDAaQa~~-G~-~~LDL-s~l~~DFv 308 (344)
++.+++.+.+. +++++.+..-+| |+.++.+++.++ + +.++++++|-+..-. +. ..+++ ...+-=++
T Consensus 134 ~d~~~l~~~~~------~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv 207 (351)
T PRK01688 134 LDLPAIADNLD------GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVI 207 (351)
T ss_pred CCHHHHHHhcc------CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEE
Confidence 78888887762 367777776666 999999776543 2 236789999986531 10 01111 11222378
Q ss_pred EEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 309 LCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 309 v~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+-|+.|+ ||-| | +|.++.+++..+
T Consensus 208 ~rSfSK~-~gla-GlRiGy~i~~~~~i~ 233 (351)
T PRK01688 208 LRTLSKA-FALA-GLRCGFTLANEEVIN 233 (351)
T ss_pred EecchHh-hcCH-HHHHhHHhCCHHHHH
Confidence 8899999 8844 7 599988776543
No 193
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.95 E-value=6.1e-09 Score=104.94 Aligned_cols=164 Identities=15% Similarity=0.034 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEe-CCHHHHHHHHHhhCCCCCCCeEEE-cCCcC---HH-HHHHH----HHcCCcEE
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFT-PNYRDAMMLVGESYPFFRGNFYMT-IIGEE---LD-YVREF----ASFKESKV 225 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFT-snaTeAlnlva~sl~~~~Gd~ivS-~~eH~---~~-~ir~l----a~~~G~kV 225 (344)
+..+-|+++++++||++|++|-+-+= -+++.|+..|..++ .++||.|++ ...|. +. ..... +.....++
T Consensus 66 ~iE~la~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aL-l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~ 144 (399)
T PF00464_consen 66 EIEELAIERAKELFGAEPKEWYANVQPHSGSQANLAVYMAL-LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFES 144 (399)
T ss_dssp HHHHHHHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHH-T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEE
T ss_pred HHHHHHHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHH-HhhcCcEEecChhhcccccccccccccccccccceEEE
Confidence 34467999999999999876555444 48888988888888 479999874 33321 11 11010 01123566
Q ss_pred EEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccccCcCCcc-----CC
Q 035915 226 ILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATALVVGEDR-----LN 299 (344)
Q Consensus 226 ~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~-----LD 299 (344)
...+++...+.||.+++++.+... +++|+.+...+.-..+|++++++ +++.|+++++|++|.+ |.+- =.
T Consensus 145 ~~y~~d~~~~~ID~d~l~~~a~~~----kPklIi~G~S~y~~~~d~~~~reIad~vga~l~~D~sH~~-GLIa~g~~~~P 219 (399)
T PF00464_consen 145 VPYPVDPDTGLIDYDELEKLAKEH----KPKLIICGASSYPRPIDFKRFREIADEVGAYLMADISHIA-GLIAGGLFPNP 219 (399)
T ss_dssp EEEEB-TTTSSB-HHHHHHHHHHH------SEEEEE-SSTSS---HHHHHHHHHHTT-EEEEE-TTTH-HHHHTTSS--G
T ss_pred EeeeeecCCCeECHHHHHHHHhhc----CCCEEEECchhccCccCHHHHHHHHHhcCcEEEecccccc-cceehheecCc
Confidence 667777667899999999988753 46899888655588889988876 5889999999999987 6542 22
Q ss_pred CCCCCCcEEEEccccCCCCCCCceEEEEEe
Q 035915 300 LALHRPDFVLCNLDNTQNAQPSKITCLLIR 329 (344)
Q Consensus 300 Ls~l~~DFvv~S~HK~l~G~P~GiG~L~Vr 329 (344)
|. .+|++++|-||. |.||+| |+++.+
T Consensus 220 ~~--~ADvvt~sThKt-l~GPrg-giI~~~ 245 (399)
T PF00464_consen 220 FP--YADVVTGSTHKT-LRGPRG-GIILTN 245 (399)
T ss_dssp CC--TSSEEEEESSGG-G-SSS--EEEEES
T ss_pred cc--cceEEEeecccc-ccccCc-eEEEEc
Confidence 32 389999999999 777976 777777
No 194
>PLN02656 tyrosine transaminase
Probab=98.93 E-value=3.4e-08 Score=98.59 Aligned_cols=161 Identities=15% Similarity=0.082 Sum_probs=110.3
Q ss_pred HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHCG------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~Lg------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.++++++ ++++ +|++|+|+|+|+.+++..+ ..+||.|+ ....|.. ....++..|++++.+|.
T Consensus 75 ~~~lr~~ia~~~~~~~g~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~Vlv~~p~y~~--~~~~~~~~g~~~~~i~~ 149 (409)
T PLN02656 75 LPQARRAIAEYLSRDLPYKLSLD--DVFITSGCTQAIDVALSML-ARPGANILLPRPGFPI--YELCAAFRHLEVRYVDL 149 (409)
T ss_pred CHHHHHHHHHHHHHhcCCCCCcc--cEEEeCChHHHHHHHHHHH-hCCCCeEEEeCCCCCc--HHHHHHHcCCEEEEEeC
Confidence 3457888888874 4554 7999999999999999887 57899854 4555542 22334446999999987
Q ss_pred CCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHH----HHHHhCCcEEEecccccCc---CCccCCC
Q 035915 231 AWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWI----SEAHRNSWHVLLDATALVV---GEDRLNL 300 (344)
Q Consensus 231 ~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~I----a~ar~~g~~vlvDAaQa~~---G~~~LDL 300 (344)
+.. +..++.++|++.+++ +++++.+..-+| |.+++.+.+ ..|+++++++++|.+..-. +.....+
T Consensus 150 ~~~~~~~~d~~~l~~~~~~-----~~~~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~ 224 (409)
T PLN02656 150 LPEKGWEVDLDAVEALADQ-----NTVALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPM 224 (409)
T ss_pred CCcCCCCCCHHHHHHHhcc-----CceEEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccH
Confidence 532 335788889887764 356677766566 999876433 3358899999999987620 1111222
Q ss_pred C---CCCCcEEEEccccCCCCCCC-ceEEEEEe
Q 035915 301 A---LHRPDFVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 301 s---~l~~DFvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
. ....=+++.|+=|. |+.|. .+|+++..
T Consensus 225 ~~~~~~~~vi~~~SfSK~-f~~pGlRiG~~i~~ 256 (409)
T PLN02656 225 GVFGSIVPVLTLGSLSKR-WIVPGWRLGWFVTT 256 (409)
T ss_pred HHhcccCcEEEEcccchh-ccCcceeEEEEEEe
Confidence 1 11234778999998 88773 48999874
No 195
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=98.93 E-value=8.9e-08 Score=95.85 Aligned_cols=180 Identities=12% Similarity=0.022 Sum_probs=121.9
Q ss_pred cccchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeE-EEcCCc
Q 035915 131 RTQLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFY-MTIIGE 209 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~i-vS~~eH 209 (344)
...++.+.+.+-|-..--..|.+.+ +--+.+++++|+. ..+-|+|+|.||.+.+.++...+||++ ++++..
T Consensus 13 i~~~e~~~v~~vl~sg~i~~G~~v~----~FE~~~ae~~G~k----~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tf 84 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTGGPFVR----RFEQAFAEYLGVK----YAVAVSSGTAALHLALLALAIGPGDEVIVPSFTF 84 (374)
T ss_pred cchHHHHHHHHHHHcCCeecChHHH----HHHHHHHHHhCCC----eEEEecChHHHHHHHHHhcCCCCCCEEEecCCch
Confidence 4556666676665544212255443 2334789999995 389999999999999997778899995 455542
Q ss_pred CHHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHH-HHHhCCcEEEecc
Q 035915 210 ELDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWIS-EAHRNSWHVLLDA 288 (344)
Q Consensus 210 ~~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia-~ar~~g~~vlvDA 288 (344)
- ..... ....|++.+.+++|.....+|.+.|+++++++ |+-|...|. -|..-+++.|. .++++|+.|+-||
T Consensus 85 v-ATan~-i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-----tKAIipVhl-~G~~~dm~~i~~la~~~~l~vIEDa 156 (374)
T COG0399 85 V-ATANA-VLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-----TKAIIPVHL-AGQPCDMDAIMALAKRHGLPVIEDA 156 (374)
T ss_pred H-HHHHH-HHHcCCeEEEEecCCcccCCCHHHHHHHcccC-----CeEEEEehh-ccCCCCHHHHHHHHHHcCCeEEEEc
Confidence 2 11111 12369999999999877899999999999874 444433322 38888998775 4699999999999
Q ss_pred cccCcCCccCCCC-CCCCcEEEEccc--cCCCCCCCceEEEEEeC
Q 035915 289 TALVVGEDRLNLA-LHRPDFVLCNLD--NTQNAQPSKITCLLIRK 330 (344)
Q Consensus 289 aQa~~G~~~LDLs-~l~~DFvv~S~H--K~l~G~P~GiG~L~Vr~ 330 (344)
+|+. |..-=+=. -.--|+-+||+| |. + .+|=|..++-+
T Consensus 157 Aqa~-Ga~y~gk~vGt~Gd~~~fSF~~~K~-i--ttgEGGav~tn 197 (374)
T COG0399 157 AQAH-GATYKGKKVGSFGDIGAFSFHATKN-L--TTGEGGAVVTN 197 (374)
T ss_pred chhc-cCeecCcccccccceEEEEecCCCC-c--cccCceEEEeC
Confidence 9999 86532211 112466666665 65 4 45655555533
No 196
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=98.92 E-value=4e-08 Score=97.37 Aligned_cols=162 Identities=15% Similarity=0.104 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHcC-----CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 158 EIQARNKVLKHCG-----LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 158 le~AR~~IA~~Lg-----a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
..+.|+.|+++++ ++++ +|++|+|+|+|+.+++..+ ..+|+.++ ..-.+. .....++..|+++..++.+
T Consensus 75 ~~~lr~aia~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l-~~~gd~v~i~~P~y~--~~~~~~~~~g~~v~~~~~~ 149 (401)
T TIGR01264 75 ALSAREAIASYYHNPDGPIEAD--DVVLCSGCSHAIEMCIAAL-ANAGQNILVPRPGFP--LYETLAESMGIEVKLYNLL 149 (401)
T ss_pred CHHHHHHHHHHHhhcCCCCCHH--HEEECcChHHHHHHHHHHh-CCCCCEEEEeCCCCh--hHHHHHHHcCCEEEEeecC
Confidence 3567888999987 6655 6999999999999999887 46788854 333222 2344556679999888875
Q ss_pred CC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc---CCccCCCC
Q 035915 232 WL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV---GEDRLNLA 301 (344)
Q Consensus 232 ~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~---G~~~LDLs 301 (344)
.. +..++.++|++.+++ +++++.++.-+| |..++.+.+. .++++|+++++|-+-.-. +.....+.
T Consensus 150 ~~~~~~~d~~~l~~~~~~-----~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~ 224 (401)
T TIGR01264 150 PDKSWEIDLKQLESLIDE-----KTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLA 224 (401)
T ss_pred CccCCCCCHHHHHHHhcc-----CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHH
Confidence 32 346888889887754 357777766566 9999864433 357899999999986520 11112222
Q ss_pred CCCC---cEEEEccccCCCCCCC-ceEEEEEeC
Q 035915 302 LHRP---DFVLCNLDNTQNAQPS-KITCLLIRK 330 (344)
Q Consensus 302 ~l~~---DFvv~S~HK~l~G~P~-GiG~L~Vr~ 330 (344)
.+.. -+++.|+=|. |+.|. .+|.+++.+
T Consensus 225 ~~~~~~~vi~~~SfSK~-~~~~GlRiG~iv~~~ 256 (401)
T TIGR01264 225 SLSSTVPILSCGGLAKR-WLVPGWRLGWIIIHD 256 (401)
T ss_pred HcCCCCcEEEEccCccc-CCCccceEEEEEecC
Confidence 2222 2788999998 78773 389888763
No 197
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=98.92 E-value=3e-08 Score=97.77 Aligned_cols=158 Identities=16% Similarity=0.089 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcC-HHHHHHHHHcCCcEEEEEeCCCC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEE-LDYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~-~~~ir~la~~~G~kV~~vp~~~~ 233 (344)
...++.++.+|+++|++++ ++++|+|+++|+..++.++. .+||+++.. .+.+ ...+...++..|+++... .
T Consensus 54 ~~~~~Le~~lA~~~g~~~e--~ilv~~gg~~a~~~~~~al~-~~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~--~-- 126 (346)
T TIGR03576 54 IFEEKVQELGREHLGGPEE--KILVFNRTSSAILATILALE-PPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFES--D-- 126 (346)
T ss_pred HHHHHHHHHHHHHcCCCcc--eEEEECCHHHHHHHHHHHhC-CCCCEEEECCCCCCCchhHHHHHHHcCCEEecc--C--
Confidence 4668899999999999776 69999999999999998884 689987642 2222 112333345557765322 1
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-ccc---ccHHHHHH-HHhCCcEEEecccccCcCCccC----CCCCCC
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTR---YSMHWISE-AHRNSWHVLLDATALVVGEDRL----NLALHR 304 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i---~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~L----DLs~l~ 304 (344)
+.++++. . .++++|.++..|. |.+ .|++.|.+ ++++|+++++|-||+. |.... .+...+
T Consensus 127 ----~l~~l~~-~------~~~~lIiitg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~-~~~~~~~~~~~~~~~ 194 (346)
T TIGR03576 127 ----ELSELKK-I------DGTSLVVITGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGA-RVRRLYGQPPALDLG 194 (346)
T ss_pred ----CHHHHhh-C------cCceEEEEECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccc-cccccCCCCCHHHcC
Confidence 2233322 1 1367777776553 888 46665544 6889999999999997 64221 122346
Q ss_pred CcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 305 PDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
+|+++.|++|+ ++|+. +|+++.++++.+
T Consensus 195 ~divv~s~SKa-laG~r-~G~v~~~~~li~ 222 (346)
T TIGR03576 195 ADLVVTSTDKL-MDGPR-GGLLAGRKELVD 222 (346)
T ss_pred CcEEEeccchh-ccccc-eEEEEeCHHHHH
Confidence 79999999998 75575 688888876554
No 198
>PLN02822 serine palmitoyltransferase
Probab=98.92 E-value=4.8e-08 Score=100.39 Aligned_cols=165 Identities=14% Similarity=0.185 Sum_probs=109.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
.....+.++++|+++|.. + .|+|++|++ ++..++.++ .++||.++..-..|.. +..-..-.|.++++++.+.
T Consensus 153 ~~~~~~Lee~La~~~~~~-~--~i~~s~G~~-a~~sai~a~-~~~gd~Ii~d~~~H~s-~~~~~~ls~~~~~~~~~nd-- 224 (481)
T PLN02822 153 IDVHLDCETKIAKFLGTP-D--SILYSYGLS-TIFSVIPAF-CKKGDIIVADEGVHWG-IQNGLYLSRSTIVYFKHND-- 224 (481)
T ss_pred HHHHHHHHHHHHHHhCCC-C--EEEECCHHH-HHHHHHHHh-CCCCCEEEEeCCccHH-HHHHHHHcCCeEEEECCCC--
Confidence 345689999999999964 3 699998887 456677776 4678887755444422 2222233467888887652
Q ss_pred CccCHHHHHHHhhh---cC-CCCCe-eEEEEeCcc-c-cccccHHHHHH-HHhCCcEEEecccccCcCCcc---------
Q 035915 235 LRIKGSQLSQYFRR---KC-KHTPK-GLFSYPADI-N-GTRYSMHWISE-AHRNSWHVLLDATALVVGEDR--------- 297 (344)
Q Consensus 235 g~i~~~~L~~~l~~---~~-~~~~t-~LVa~~avS-N-G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~--------- 297 (344)
.++++..+.. .. ...++ ++|.+.... | |.+.|+++|.+ ++++|+++++|-+|+. |...
T Consensus 225 ----~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~-gvlG~~G~G~~e~ 299 (481)
T PLN02822 225 ----MESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSF-GVLGKSGRGLSEH 299 (481)
T ss_pred ----HHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccc-cccCCCCCChHHH
Confidence 2334433321 10 00123 566665554 4 99999987765 6899999999999996 6421
Q ss_pred CCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 298 LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 298 LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+++....+|+++.|+.|. || ..| |+++.+++..+.
T Consensus 300 ~~v~~~~~dii~~s~sKa-lg-~~G-G~i~g~~~ii~~ 334 (481)
T PLN02822 300 FGVPIEKIDIITAAMGHA-LA-TEG-GFCTGSARVVDH 334 (481)
T ss_pred cCCCCCCCeEEEecchhh-hh-hCC-eEEEcCHHHHHH
Confidence 233333689999999999 88 557 888877765543
No 199
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=98.91 E-value=5.6e-08 Score=97.02 Aligned_cols=160 Identities=13% Similarity=0.108 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHcC------------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcE
Q 035915 158 EIQARNKVLKHCG------------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESK 224 (344)
Q Consensus 158 le~AR~~IA~~Lg------------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~k 224 (344)
..+.|+.||++++ ++++ +|++|+|+++|+.+++..+ ..+||.++ ..-.|.. +...++..|++
T Consensus 77 ~~~Lr~aia~~~~~~~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~P~y~~--~~~~~~~~g~~ 151 (412)
T PTZ00433 77 SPEAREAVATYWRNSFVHKESLKSTIKKD--NVVLCSGVSHAILMALTAL-CDEGDNILVPAPGFPH--YETVCKAYGIE 151 (412)
T ss_pred cHHHHHHHHHHHHhhccccccccCCCChh--hEEEeCChHHHHHHHHHHh-cCCCCEEEEccCCccc--HHHHHHHcCCE
Confidence 4557888888876 4554 7999999999999999987 46899864 3333332 33445667999
Q ss_pred EEEEeCCCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHH----HHHHhCCcEEEecccccCc---C
Q 035915 225 VILAPEAWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWI----SEAHRNSWHVLLDATALVV---G 294 (344)
Q Consensus 225 V~~vp~~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~I----a~ar~~g~~vlvDAaQa~~---G 294 (344)
+..+|.+.. +..++.++|++.+++ +++++.++.-+| |..++.+.+ ..|+++|+++++|-+..-. +
T Consensus 152 ~~~i~~~~~~~~~~d~~~l~~~~~~-----~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~ 226 (412)
T PTZ00433 152 MRFYNCRPEKDWEADLDEIRRLVDD-----RTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG 226 (412)
T ss_pred EEEEecCccccCcCCHHHHHHHhcc-----CceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCC
Confidence 999987532 346788889887764 367777776666 999987544 2357899999999987520 1
Q ss_pred CccCCCCCC---CCcEEEEccccCCCCCCC-ceEEEEE
Q 035915 295 EDRLNLALH---RPDFVLCNLDNTQNAQPS-KITCLLI 328 (344)
Q Consensus 295 ~~~LDLs~l---~~DFvv~S~HK~l~G~P~-GiG~L~V 328 (344)
.....+..+ ..-+++.|+=|. ||.|. .+|.+++
T Consensus 227 ~~~~~~~~~~~~~~~i~~~SfSK~-~~~pGlRlG~~i~ 263 (412)
T PTZ00433 227 ATFTSVADFDTTVPRVILGGTAKN-LVVPGWRLGWLLL 263 (412)
T ss_pred CCccchhhccCCCceEEEccchhh-cCCCCeeEEEEEE
Confidence 110111111 123678899999 87673 5888886
No 200
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=98.89 E-value=2.5e-08 Score=96.42 Aligned_cols=171 Identities=14% Similarity=0.073 Sum_probs=118.0
Q ss_pred HHHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 157 PEIQARNKVLKHCG------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 157 ~le~AR~~IA~~Lg------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
-....|+.+|++++ .+++ ..|++|+|+.+++.++...+...+|+.++ ..-.|.. +...++..|++++.+|
T Consensus 45 g~~~lr~~ia~~~~~~~~~~~~~~-~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~--~~~~~~~~g~~~~~~~ 121 (363)
T PF00155_consen 45 GYPELREAIADFLGRRYGVPVDPE-ANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPS--YIEAARLLGAEVIPVP 121 (363)
T ss_dssp HHHHHHHHHHHHHHHHHTHHTTGG-EGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTH--HHHHHHHTTSEEEEEE
T ss_pred hhHHHHHHHHHHhhhccCcccccc-eEEEEecccccchhhhhhcccccccccceecCCcccc--ccccccccCceeeecc
Confidence 35678999999999 5543 26999999999998887776345688754 3333442 3455666799998888
Q ss_pred CC-CCCCccCHHHHHHHhhhcCCCC-CeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCcCCcc----
Q 035915 230 EA-WLDLRIKGSQLSQYFRRKCKHT-PKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVVGEDR---- 297 (344)
Q Consensus 230 ~~-~~~g~i~~~~L~~~l~~~~~~~-~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~G~~~---- 297 (344)
.+ ..+..++.++|++.+++..... +++++.++..+| |..+|.+.+.+ ++++++++++|-++.. ....
T Consensus 122 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~-~~~~~~~~ 200 (363)
T PF00155_consen 122 LDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSD-LIFGDPDF 200 (363)
T ss_dssp EEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTT-GBSSSSHT
T ss_pred ccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceec-cccCCCcc
Confidence 53 1245789999999887521111 356777776666 99999965543 4789999999999987 3322
Q ss_pred ----CCCCCCCC-cEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 298 ----LNLALHRP-DFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 298 ----LDLs~l~~-DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
..+. ... .+++.|+-|. ||.| | +|++++.++..+
T Consensus 201 ~~~~~~~~-~~~~vi~~~S~SK~-~g~~-GlRvG~i~~~~~~~~ 241 (363)
T PF00155_consen 201 GPIRSLLD-EDDNVIVVGSLSKS-FGLP-GLRVGYIVAPPELIE 241 (363)
T ss_dssp HHHHGHHT-TTSTEEEEEESTTT-TTSG-GGTEEEEEEEHHHHH
T ss_pred Cccccccc-ccccceeeeecccc-cccc-ccccccccchhhhhh
Confidence 1122 233 4999999999 8867 5 899998665443
No 201
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=98.89 E-value=4.6e-08 Score=103.37 Aligned_cols=195 Identities=13% Similarity=0.090 Sum_probs=122.7
Q ss_pred cccchHHHHHHhhccC--CCC-hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHH---HHhh---CCC--CC
Q 035915 131 RTQLEPSRLLDILTKK--SSF-PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMML---VGES---YPF--FR 199 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gn--ss~-~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnl---va~s---l~~--~~ 199 (344)
......-.+..++++. ..+ .+...+....++=+.+++++|.++. .=+||+|+|+|+-. +++. +|+ +.
T Consensus 95 ~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~--~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~ 172 (608)
T TIGR03811 95 LMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG--WGHIVADGSLANLEGLWYARNIKSLPFAMKE 172 (608)
T ss_pred CHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC--CeEEeCChHHHHHHHHHHHHHhhhccchhhh
Confidence 4455555566655543 222 3334455668899999999998753 34699999998653 3332 121 00
Q ss_pred -------------------------------------------CC------eEEEcCC-cCHHHHHHHHHcCCc---EEE
Q 035915 200 -------------------------------------------GN------FYMTIIG-EELDYVREFASFKES---KVI 226 (344)
Q Consensus 200 -------------------------------------------Gd------~ivS~~e-H~~~~ir~la~~~G~---kV~ 226 (344)
|. .++++-. |. +|...|.-.|+ .|+
T Consensus 173 ~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHy--S~~KAa~ilGlG~~~vv 250 (608)
T TIGR03811 173 VKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHY--SWLKAADIIGIGLDQVI 250 (608)
T ss_pred ccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccH--HHHHHHHHcCCCcccEE
Confidence 00 2333323 33 24444555576 588
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCC-CCe-eEEEEeCccc-cccccHHHHHHH----HhCCc--EEEecccccCcCC--
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKH-TPK-GLFSYPADIN-GTRYSMHWISEA----HRNSW--HVLLDATALVVGE-- 295 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~-~~t-~LVa~~avSN-G~i~Pl~~Ia~a----r~~g~--~vlvDAaQa~~G~-- 295 (344)
.+|++. +++++.+.|++.+++.... .++ .+|+.....+ |.+=||+.|..+ +++|+ ++|||||-.- -.
T Consensus 251 ~VpvD~-~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG-~~~~ 328 (608)
T TIGR03811 251 PVPVDS-NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGG-YGRA 328 (608)
T ss_pred EeecCC-CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccc-hhhh
Confidence 899986 5899999999988642111 122 2333333333 999999888654 45776 6999998763 21
Q ss_pred ccCC---------------------------CC---------CCCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 296 DRLN---------------------------LA---------LHRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 296 ~~LD---------------------------Ls---------~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
.-++ ++ -..+|-+++.+||| ++.|.++|+|++|+..
T Consensus 329 l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~-g~~Py~~G~ll~Rd~~ 400 (608)
T TIGR03811 329 IFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKM-GYIPYSAGGIVIQDIR 400 (608)
T ss_pred hhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccc-cccCCCeEEEEEeCHH
Confidence 0011 11 13699999999999 6679999999999764
No 202
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=98.89 E-value=1.9e-08 Score=98.43 Aligned_cols=165 Identities=13% Similarity=0.076 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC------GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L------ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
....|+.||+++ +++++ +|++|+|+++++.+++..+ ..+|+.++. .-.++ .....++..|++++.+|.
T Consensus 67 ~~~lr~aia~~~~~~~~~~~~~~--~I~it~G~~~~l~~~~~~~-~~~gd~v~v~~P~y~--~~~~~~~~~g~~~~~~~~ 141 (368)
T PRK03317 67 AVALRADLAAYLTAQTGVGLTVE--NVWAANGSNEILQQLLQAF-GGPGRTALGFVPSYS--MHPIIARGTHTEWVEGPR 141 (368)
T ss_pred hHHHHHHHHHHhhhhccCCCChh--hEEECCCHHHHHHHHHHHh-cCCCCEEEEeCCChH--HHHHHHHhcCCeeEEccc
Confidence 466888899988 56665 7999999999999999987 367888653 22222 233445556888887776
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCcc----CCCCCC
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDR----LNLALH 303 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~----LDLs~l 303 (344)
+. +..++.+++++.+... +++++.++..+| |..+|.+++.+ ++..++++++|-++.-.+... +.+...
T Consensus 142 ~~-~~~~d~~~l~~~~~~~----~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~ 216 (368)
T PRK03317 142 AA-DFTLDVDAAVAAIAEH----RPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLPE 216 (368)
T ss_pred CC-CCCCCHHHHHHHHhcc----CCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHHh
Confidence 43 3457889998888632 355666654455 99999987765 466689999999987412111 111111
Q ss_pred CCc-EEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 304 RPD-FVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 304 ~~D-Fvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.++ +++.|+-|. ||.| | +|+++.++++.+
T Consensus 217 ~~~~i~~~SfSK~-~g~~-GlRiG~~~~~~~~~~ 248 (368)
T PRK03317 217 YPRLVVSRTMSKA-FAFA-GGRLGYLAAAPAVVD 248 (368)
T ss_pred CCCEEEEEechhh-hccc-hhhhhhhhCCHHHHH
Confidence 234 566699999 8766 5 688887765543
No 203
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=98.86 E-value=1.2e-07 Score=94.74 Aligned_cols=163 Identities=11% Similarity=0.109 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEeCCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREFASFKESKVILAPEAWLDL 235 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp~~~~~g 235 (344)
...+.++++|+++|++ + .++|++|.++.+..+. ++ +++||+|+.. ..|... +.. +.-.++++.+++.+..
T Consensus 44 ~~~~LE~~lA~~~g~e-~--al~~~sG~~a~~~~i~-~l-~~~GD~Vl~~~~~h~s~-~~~-~~l~~~~~~~~~~~d~-- 114 (392)
T PLN03227 44 AHLELEQCMAEFLGTE-S--AILYSDGASTTSSTVA-AF-AKRGDLLVVDRGVNEAL-LVG-VSLSRANVRWFRHNDM-- 114 (392)
T ss_pred HHHHHHHHHHHHhCCC-c--EEEecCcHHHHHHHHH-Hh-CCCCCEEEEeccccHHH-HHH-HHHcCCeEEEeCCCCH--
Confidence 5789999999999985 3 6999999988885443 34 6799997644 444422 222 1223567776665321
Q ss_pred ccCHHHHHHHhhhcC------CCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCc-c--------
Q 035915 236 RIKGSQLSQYFRRKC------KHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGED-R-------- 297 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~------~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~-~-------- 297 (344)
-+.+.+.+.+.+.. ...++++|.+....| |.+.|++.+.+ ++++|+++++|-+|++ |.. +
T Consensus 115 -~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~-g~~g~~G~g~~~~ 192 (392)
T PLN03227 115 -KDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSF-GTLGKSGRGSLEH 192 (392)
T ss_pred -HHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccc-cccCCCCCcHHHH
Confidence 12233333333110 012467888876654 99999987765 6999999999999996 532 1
Q ss_pred CCCC-CCCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 298 LNLA-LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 298 LDLs-~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
+++. ..++|.+++|+.|. +| |. .|++..+++..
T Consensus 193 ~g~~p~~~~Div~~slsk~-~g-~~-gg~v~~~~~~~ 226 (392)
T PLN03227 193 AGLKPMVHAEIVTFSLENA-FG-SV-GGMTVGSEEVV 226 (392)
T ss_pred cCCCCCCCceEEEeechhh-hh-cc-CcEEecCHHHH
Confidence 1121 23669999999998 77 63 35555665543
No 204
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.85 E-value=1.2e-07 Score=95.88 Aligned_cols=161 Identities=14% Similarity=0.091 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHHcCC------CCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 157 PEIQARNKVLKHCGL------PDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 157 ~le~AR~~IA~~Lga------~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
-+.+.|+.|+++++. +++ +|++|+|+|+|+.+++..+ ..+||+|+ ..-.+.. ....+...|++++.++
T Consensus 95 G~~~lr~aia~~~~~~~~~~~~~~--~v~it~G~~~al~l~~~~l-~~~Gd~Vlv~~P~y~~--y~~~~~~~g~~~~~~~ 169 (430)
T PLN00145 95 GLLPARRAIAEYLSRDLPYELSTD--DIYLTAGCAQAIEIIMSVL-AQPGANILLPRPGYPL--YEARAVFSGLEVRHFD 169 (430)
T ss_pred cCHHHHHHHHHHHhhccCCCCChh--hEEEeCCHHHHHHHHHHHh-cCCCCEEEEcCCCCcc--HHHHHHHcCCEEEEee
Confidence 356688889988853 444 7999999999999999988 47899865 4434332 2233445688988877
Q ss_pred CCC-CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHH---HH-HHHhCCcEEEecccccCc--C-CccCC
Q 035915 230 EAW-LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHW---IS-EAHRNSWHVLLDATALVV--G-EDRLN 299 (344)
Q Consensus 230 ~~~-~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~---Ia-~ar~~g~~vlvDAaQa~~--G-~~~LD 299 (344)
... .+..++.++|++++++ +++++.+..-+| |.++|.+. |. .++++|+++++|.+-.-. + ...+.
T Consensus 170 ~~~~~~~~~d~~~l~~~~~~-----~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~ 244 (430)
T PLN00145 170 LLPERGWEVDLEGVEALADE-----NTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVP 244 (430)
T ss_pred CCcccCCcCCHHHHHHHhCc-----CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccc
Confidence 532 2346889999888765 356677666666 99999543 33 358899999999985520 1 11122
Q ss_pred C---CCCCCcEEEEccccCCCCCCC-ceEEEEE
Q 035915 300 L---ALHRPDFVLCNLDNTQNAQPS-KITCLLI 328 (344)
Q Consensus 300 L---s~l~~DFvv~S~HK~l~G~P~-GiG~L~V 328 (344)
+ .....=+++.|+=|. |+.|- .+|.+++
T Consensus 245 ~~~~~~~~~vi~~~S~SK~-~~~pG~RlG~iv~ 276 (430)
T PLN00145 245 MGVFGEVAPVLTLGSISKR-WVVPGWRLGWIAT 276 (430)
T ss_pred hhhhcccCcEEEEeccccc-cCCCCeeEEEEEE
Confidence 2 222234888999998 88773 4888887
No 205
>PRK06290 aspartate aminotransferase; Provisional
Probab=98.85 E-value=9.1e-08 Score=96.06 Aligned_cols=165 Identities=11% Similarity=0.096 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 158 EIQARNKVLKHC----G---LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 158 le~AR~~IA~~L----g---a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
..+.|+.||+++ | +++++ +|++|+|+++++.+++..+ ..+||.++ ..-.+.. ....++..|+++..+|
T Consensus 83 ~~~lr~aia~~~~~~~g~~~~~~~~-~I~it~Gs~~al~~~~~~~-~~~gd~Vlv~~P~y~~--~~~~~~~~g~~v~~v~ 158 (410)
T PRK06290 83 IQEFKEAAARYMEKVFGVKDIDPVT-EVIHSIGSKPALAMLPSCF-INPGDVTLMTVPGYPV--TGTHTKYYGGEVYNLP 158 (410)
T ss_pred cHHHHHHHHHHHHHHcCCCcCCCcc-eEEEccCHHHHHHHHHHHh-CCCCCEEEEeCCCCcc--HHHHHHHcCCEEEEEe
Confidence 456777777775 4 44432 6999999999999999887 46899864 3333331 2344566799999999
Q ss_pred CCCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcCC---ccCC
Q 035915 230 EAWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVGE---DRLN 299 (344)
Q Consensus 230 ~~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~---~~LD 299 (344)
.+.. +..++.+++++.+.. +++++.+..-+| |.++|.+.+. .|+++++++++|-+..- -. .+..
T Consensus 159 ~~~~~~~~~d~~~l~~~~~~-----~~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~-~~~~~~~~s 232 (410)
T PRK06290 159 LLEENNFLPDLDSIPKDIKE-----KAKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIVVQDAAYAA-LTFDGKPLS 232 (410)
T ss_pred cCCCcCCcCCHHHHHHhhcc-----cceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecchhh-ceeCCCCcC
Confidence 8643 234578888777754 356666664456 9999985443 35789999999998774 21 1112
Q ss_pred ---CCC-CCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 300 ---LAL-HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 300 ---Ls~-l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+.. .+.++++.|+=|. ||.| | +|+++..+++.+
T Consensus 233 ~~~~~~~~~~~I~i~SfSK~-~g~~-GlRiG~ii~~~~l~~ 271 (410)
T PRK06290 233 FLSVPGAKEVGVEIHSLSKA-YNMT-GWRLAFVVGNELIVK 271 (410)
T ss_pred hhcCCCccccEEEEeechhh-cCCc-hhheEeEEeCHHHHH
Confidence 211 2457999999999 8866 6 799988765544
No 206
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=98.84 E-value=7.4e-08 Score=94.78 Aligned_cols=167 Identities=15% Similarity=0.103 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCC-CeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCC-CC
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRG-NFYM-TIIGEELDYVREFASFKESKVILAPEAW-LD 234 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~G-d~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~-~~ 234 (344)
..+.|+.||+++|++++ +|++|+|+++++++++..+ ..+| +.++ ..-. .......++..|++++.+|.+. .+
T Consensus 61 ~~~lr~~ia~~~~~~~~--~I~~t~G~~~~l~~~~~~~-~~~g~~~vlv~~p~--y~~~~~~~~~~g~~~~~v~~~~~~~ 135 (364)
T PRK04781 61 PPGLRSALAALYGCAPE--QLLIGRGSDEAIDLLVRAL-CVPGRDAVLVTPPV--FGMYAVCARLQNAPLVEVPLVDGAD 135 (364)
T ss_pred HHHHHHHHHHHhCcChH--HEEEeCCHHHHHHHHHHHh-cCCCCCeEEEcCCC--hHHHHHHHHHcCCEEEEEecCCCcc
Confidence 46789999999999876 7999999999999999887 3567 5654 2222 2223444566799999998742 12
Q ss_pred C-ccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHH-H--hCCcEEEecccccCc-CC-ccCCC-CCCCC
Q 035915 235 L-RIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEA-H--RNSWHVLLDATALVV-GE-DRLNL-ALHRP 305 (344)
Q Consensus 235 g-~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~a-r--~~g~~vlvDAaQa~~-G~-~~LDL-s~l~~ 305 (344)
+ .++.+++.+.+.. .+++++.++..+| |.++|.+.+.++ + +.++++++|.+-.-. .. ..+.+ ...+-
T Consensus 136 ~~~~d~~~l~~~~~~----~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~ 211 (364)
T PRK04781 136 GFHADVPAIVAAALA----SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDN 211 (364)
T ss_pred CCCcCHHHHHHHHhc----cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCC
Confidence 2 3566776544321 2467888876666 999999777543 3 247889999986420 11 11111 11122
Q ss_pred cEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 306 DFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
=+++.|+=|. ||.|. .+|.++..++..+
T Consensus 212 vi~~~SfSK~-~gl~GlRvGy~v~~~~l~~ 240 (364)
T PRK04781 212 LAVLRTLSKA-HALAAARIGSLIANAELIA 240 (364)
T ss_pred EEEEecChhh-cccccceeeeeeCCHHHHH
Confidence 3788999999 88662 4899988765544
No 207
>PLN02187 rooty/superroot1
Probab=98.84 E-value=1.3e-07 Score=96.64 Aligned_cols=161 Identities=15% Similarity=0.087 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHCG------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~Lg------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
....|+.||++++ ++++ +|++|+|+++|+.+++.++ ..+||.|+ ..-.++. ....++..|++++.++.
T Consensus 110 ~~~lR~aiA~~~~~~~~~~~~~~--~I~it~G~~~al~~~~~~l-~~pGd~Vlv~~P~y~~--y~~~~~~~g~~~~~~~l 184 (462)
T PLN02187 110 ILPARRAVADYMNRDLPHKLTPE--DIFLTAGCNQGIEIVFESL-ARPNANILLPRPGFPH--YDARAAYSGLEVRKFDL 184 (462)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcc--cEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCcc--HHHHHHHcCCEEEEEeC
Confidence 5668888999884 5665 7999999999999999988 57899864 4444442 23345667999998876
Q ss_pred CC-CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc---CCccCCC
Q 035915 231 AW-LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV---GEDRLNL 300 (344)
Q Consensus 231 ~~-~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~---G~~~LDL 300 (344)
.. .+..++.++|++++++ +++++.+..-+| |.+++.+.+. .|+++|+++++|-+..-. +.....+
T Consensus 185 ~~~~~~~~d~~~l~~~~~~-----~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~ 259 (462)
T PLN02187 185 LPEKEWEIDLEGIEAIADE-----NTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM 259 (462)
T ss_pred ccccCCccCHHHHHHhcCC-----CcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH
Confidence 32 2346788999887754 356666665556 9999964433 358899999999986520 1111122
Q ss_pred CCCC---CcEEEEccccCCCCCCC-ceEEEEEe
Q 035915 301 ALHR---PDFVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 301 s~l~---~DFvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
..+. .=+++.|+=|. |+.|. .+|.+++.
T Consensus 260 ~~~~~~~~vi~l~SfSK~-f~~pGlRiG~~v~~ 291 (462)
T PLN02187 260 GKFASIVPVLTLAGISKG-WVVPGWKIGWIALN 291 (462)
T ss_pred HHhccCCcEEEEecchhh-cCCccceeEEEEec
Confidence 2221 23677899999 88773 48988873
No 208
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=98.84 E-value=9e-08 Score=98.79 Aligned_cols=169 Identities=12% Similarity=0.129 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEE
Q 035915 158 EIQARNKVLKHCG--------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILA 228 (344)
Q Consensus 158 le~AR~~IA~~Lg--------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~v 228 (344)
..+.|+.||++++ ++|+ +|++|+|+++|+.+++.++ ..+||.|+. .-.++. ....+..+.|++++.+
T Consensus 96 ~~~LR~aiA~~l~~~~g~~v~v~pe--~Ivit~Ga~~al~~l~~~l-~~pGD~Vlv~~P~Y~~-~~~~~~~~~G~~vv~v 171 (496)
T PLN02376 96 LKKFRQAIAHFMGKARGGKVTFDPE--RVVMSGGATGANETIMFCL-ADPGDVFLIPSPYYAA-FDRDLRWRTGVEIIPV 171 (496)
T ss_pred cHHHHHHHHHHHHHHhCCCCcCChh--hEEEccchHHHHHHHHHHh-CCCCCEEEECCCCccc-hHHHHHhhCCCEEEEE
Confidence 3568888888876 6666 7999999999999999988 468998653 222331 1122222469999999
Q ss_pred eCCCC-CCccCHHHHHHHhhhc-CCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc---CCcc
Q 035915 229 PEAWL-DLRIKGSQLSQYFRRK-CKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV---GEDR 297 (344)
Q Consensus 229 p~~~~-~g~i~~~~L~~~l~~~-~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~---G~~~ 297 (344)
|.+.. +..++.+.+++.+... ....+++++.++.-+| |+++|.+.+. .|+++++++++|-+.+.. +...
T Consensus 172 ~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~ 251 (496)
T PLN02376 172 PCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDF 251 (496)
T ss_pred eCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCc
Confidence 98532 2457888887654321 0112467666665556 9999986654 347899999999987741 1111
Q ss_pred CCCCC---------CCCc--EEEEccccCCCCCCC-ceEEEEEeCC
Q 035915 298 LNLAL---------HRPD--FVLCNLDNTQNAQPS-KITCLLIRKK 331 (344)
Q Consensus 298 LDLs~---------l~~D--Fvv~S~HK~l~G~P~-GiG~L~Vr~~ 331 (344)
..+.. .++| .++.|+-|. ||.|. .+|+++..++
T Consensus 252 ~si~~l~~~~~~~~~~~~~v~vv~S~SK~-~glpGlRvG~li~~~~ 296 (496)
T PLN02376 252 VSVAEVVNDVDISEVNVDLIHIVYSLSKD-MGLPGFRVGIVYSFND 296 (496)
T ss_pred ccHHHhhccccccccCCCeEEEEEecccc-CCCCcceEEEEEECCH
Confidence 22111 1234 346899999 88673 5999998543
No 209
>PRK06107 aspartate aminotransferase; Provisional
Probab=98.83 E-value=1.6e-07 Score=93.37 Aligned_cols=163 Identities=14% Similarity=0.042 Sum_probs=103.7
Q ss_pred HHHHHHHHHHcCC--CCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC-HHHHHHHHHcCCcEEEEEeCCCC-
Q 035915 159 IQARNKVLKHCGL--PDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE-LDYVREFASFKESKVILAPEAWL- 233 (344)
Q Consensus 159 e~AR~~IA~~Lga--~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~-~~~ir~la~~~G~kV~~vp~~~~- 233 (344)
+...+.+.+.+|. +++ +|++|+|+|+|+++++.++ +.+|+.++ ....+. ...+ ....+.++..++.+..
T Consensus 77 ~~ia~~l~~~~g~~~~~~--~i~~t~G~~~al~~~~~~~-~~~gd~vl~~~p~y~~y~~~---~~~~~~~~~~v~~~~~~ 150 (402)
T PRK06107 77 KAIIAKLERRNGLHYADN--EITVGGGAKQAIFLALMAT-LEAGDEVIIPAPYWVSYPDM---VLANDGTPVIVACPEEQ 150 (402)
T ss_pred HHHHHHHHHhcCCCCChh--hEEEeCCHHHHHHHHHHHh-cCCCCEEEEecCCCcCHHHH---HHHcCCEEEEecCCccc
Confidence 4555555666676 444 7999999999999998876 67899865 343332 1111 2234666666766422
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhC-CcEEEecccccCc---CCccCCCCCC
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRN-SWHVLLDATALVV---GEDRLNLALH 303 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~-g~~vlvDAaQa~~---G~~~LDLs~l 303 (344)
+..++.+.|++.+.+ +++++.++.-+| |..+|.+.+. .|+++ ++++++|-+-.-. +.....+...
T Consensus 151 ~~~~~~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~ 225 (402)
T PRK06107 151 GFKLTPEALEAAITP-----RTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAA 225 (402)
T ss_pred CCCCCHHHHHhhcCc-----CceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHh
Confidence 235788888888764 356666665556 9999985443 35777 9999999765320 1111111111
Q ss_pred -----CCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 304 -----RPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 304 -----~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+--+++.|+.|. ||.| | +|+++..+++.+
T Consensus 226 ~~~~~~~vi~~~S~SK~-~~~p-GlRiG~~~~~~~~~~ 261 (402)
T PRK06107 226 APELRDRVLVTNGVSKT-YAMT-GWRIGYAAGPADLIA 261 (402)
T ss_pred CcCccCCEEEEeccchh-hcCc-ccceeeeecCHHHHH
Confidence 234777888999 8756 6 599988776554
No 210
>PRK06348 aspartate aminotransferase; Provisional
Probab=98.82 E-value=1.1e-07 Score=93.89 Aligned_cols=163 Identities=12% Similarity=0.057 Sum_probs=107.7
Q ss_pred HHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCC
Q 035915 160 QARNKVLKHC------GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 160 ~AR~~IA~~L------ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~ 232 (344)
+.|+.|++++ +++++ +|++|+|+++|+.+++.++ ..+|+.|+. .-.+. .....++..|.+++.+|...
T Consensus 70 ~lr~~ia~~~~~~~~~~~~~~--~i~it~G~~~al~~~~~~~-~~~gd~vlv~~p~y~--~~~~~~~~~g~~~~~~~~~~ 144 (384)
T PRK06348 70 ELIEEIIKYYSKNYDLSFKRN--EIMATVGACHGMYLALQSI-LDPGDEVIIHEPYFT--PYKDQIEMVGGKPIILETYE 144 (384)
T ss_pred HHHHHHHHHHHHHhCCCCChh--hEEEcCChHHHHHHHHHHh-cCCCCEEEEeCCCCc--chHHHHHHcCCEEEEecCCc
Confidence 4667777766 45665 7999999999999999988 578998653 32222 12333445688888887632
Q ss_pred -CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc--CCccCCCCC-
Q 035915 233 -LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV--GEDRLNLAL- 302 (344)
Q Consensus 233 -~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~--G~~~LDLs~- 302 (344)
.+..++.++|++.+++ ++++|.++.-+| |..++.+.+. .++++++++++|-+-.-. +.....+..
T Consensus 145 ~~~~~~d~~~l~~~~~~-----~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 219 (384)
T PRK06348 145 EDGFQINVKKLEALITS-----KTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDFVPMATL 219 (384)
T ss_pred CcCCcCCHHHHHHhhCc-----CccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCccchhhc
Confidence 2335788999888764 355666654445 9999975443 357899999999986630 111112211
Q ss_pred ---CCCcEEEEccccCCCCCCC-ceEEEEEeCCCc
Q 035915 303 ---HRPDFVLCNLDNTQNAQPS-KITCLLIRKKSF 333 (344)
Q Consensus 303 ---l~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~ 333 (344)
.+-.+++.|+=|. ||.|. .+|++++.+++.
T Consensus 220 ~~~~~~vi~~~SfSK~-~~l~GlRiG~~v~~~~~~ 253 (384)
T PRK06348 220 AGMPERTITFGSFSKD-FAMTGWRIGYVIAPDYII 253 (384)
T ss_pred CCCcCcEEEEecchhc-cCCccccceeeecCHHHH
Confidence 1234788899999 87662 389988876543
No 211
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=98.82 E-value=7.6e-08 Score=94.80 Aligned_cols=174 Identities=11% Similarity=0.040 Sum_probs=110.6
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC-CCCCCCeEE-EcCCcC--HHHHHHHHHc---------
Q 035915 154 ISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY-PFFRGNFYM-TIIGEE--LDYVREFASF--------- 220 (344)
Q Consensus 154 as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl-~~~~Gd~iv-S~~eH~--~~~ir~la~~--------- 220 (344)
......+..+.++++++.+.+ .|+||.|+|+|+..++..+ .+..++.++ ..-.+| ......+...
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~--~v~~~~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~ 154 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLD--KVFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGP 154 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCC--EEEEcCcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCC
Confidence 345678899999999997555 7999999999999877754 244567754 343444 2222221111
Q ss_pred CCcEEEEEeCCCC-----CCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-c-ccccc----HHHHHH-HHhCCcEEEecc
Q 035915 221 KESKVILAPEAWL-----DLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-N-GTRYS----MHWISE-AHRNSWHVLLDA 288 (344)
Q Consensus 221 ~G~kV~~vp~~~~-----~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-N-G~i~P----l~~Ia~-ar~~g~~vlvDA 288 (344)
....+..+|.+.. +...+.++|++.+++. ..++++|.+..+. + |.+.| ++.|.+ ++++|+++++|-
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~De 232 (413)
T cd00610 155 LLPGVLHVPYPYRYRPPAELADDLEALEEALEEH--PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADE 232 (413)
T ss_pred CCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC--CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 0223555665421 1123567788777641 1245666666554 3 99888 766654 689999999999
Q ss_pred cccCcCCc----cCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 289 TALVVGED----RLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 289 aQa~~G~~----~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
+|+-.|.. ..+.....+|++++| |+ ++++-.+|+++.++++.+
T Consensus 233 v~~g~g~~g~~~~~~~~~~~~d~~t~s--K~-l~~g~~~g~~~~~~~~~~ 279 (413)
T cd00610 233 VQTGFGRTGKMFAFEHFGVEPDIVTLG--KG-LGGGLPLGAVLGREEIMD 279 (413)
T ss_pred cccCCCcCcchhhHhhcCCCCCeEEEc--cc-ccCccccEEEEEcHHHHH
Confidence 98741322 123334568988877 99 775455999998876554
No 212
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=98.81 E-value=3.4e-08 Score=97.49 Aligned_cols=162 Identities=12% Similarity=0.101 Sum_probs=111.8
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
..+.|+.||+++|++++ +|++|+|+++++.+++..+ ..+||.++.. -.+ ......++..|++++.+|.+. +.
T Consensus 66 ~~~Lr~aia~~~~~~~~--~I~vt~Gs~e~i~~~~~~l-~~~gd~vlv~~P~y--~~~~~~~~~~g~~v~~v~~~~--~~ 138 (366)
T PRK01533 66 ATTLRQTIANKLHVKME--QVLCGSGLDEVIQIISRAV-LKAGDNIVTAGATF--PQYRHHAIIEGCEVKEVALNN--GV 138 (366)
T ss_pred HHHHHHHHHHHhCCCcc--eEEECCCHHHHHHHHHHHh-cCCCCEEEEcCCcH--HHHHHHHHHcCCEEEEeecCC--CC
Confidence 45699999999999886 7999999999999999987 4689886532 222 223344566799999999863 45
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHH----HhCCcEEEecccccCc-CC----ccCC-CCCCC
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEA----HRNSWHVLLDATALVV-GE----DRLN-LALHR 304 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~a----r~~g~~vlvDAaQa~~-G~----~~LD-Ls~l~ 304 (344)
++.++|++.+++ +++++.++.-+| |.++|.+++.++ ++++ .+++|-+..-. .. ..+. +...+
T Consensus 139 ~d~~~l~~~~~~-----~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~ 212 (366)
T PRK01533 139 YDLDEISSVVDN-----DTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHK 212 (366)
T ss_pred cCHHHHHHHhCc-----CCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCC
Confidence 899999888764 356777776666 999999777543 3344 57778775310 10 0111 11122
Q ss_pred CcEEEEccccCCCCCCC-ceEEEEEeCCCc
Q 035915 305 PDFVLCNLDNTQNAQPS-KITCLLIRKKSF 333 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~ 333 (344)
--+++-|+=|. ||.|. .+|.++..+++.
T Consensus 213 ~vi~~~SfSK~-~~l~GlRiG~~i~~~~~~ 241 (366)
T PRK01533 213 NILVLRTFSKA-YGLASFRVGYAVGHEELI 241 (366)
T ss_pred CEEEEeCchHH-hcChHHHHhHHhCCHHHH
Confidence 34888999999 88662 378887765443
No 213
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=98.80 E-value=7.8e-08 Score=94.77 Aligned_cols=161 Identities=16% Similarity=0.163 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHH-----HHHHHHHcCCcEEEEEeC
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELD-----YVREFASFKESKVILAPE 230 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~-----~ir~la~~~G~kV~~vp~ 230 (344)
....++.+++++++|. . .++|++++|.|+.+.+.+.- ++|..+++.-+-|+. .+..+. .|.++..++
T Consensus 35 ~~~~~~e~~~ae~~g~--~--a~~Fv~sGT~aN~lal~~~~-~~~~~vi~~~~aHi~~~E~Ga~~~~~--~~~~~~~~~- 106 (342)
T COG2008 35 PTTNALEQRIAELFGK--E--AALFVPSGTQANQLALAAHC-QPGESVICHETAHIYTDECGAPEFFG--GGQKLPIVP- 106 (342)
T ss_pred HHHHHHHHHHHHHhCC--c--eEEEecCccHHHHHHHHHhc-CCCCeEEEeccccceecccCcHHHHc--CCceeccCC-
Confidence 3567788899999998 3 59999999999998888764 678776644332311 222221 234443333
Q ss_pred CCCCCccCHHHHHHHhhhcC-CCCCeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCc--CCccCCCC
Q 035915 231 AWLDLRIKGSQLSQYFRRKC-KHTPKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVV--GEDRLNLA 301 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~-~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~--G~~~LDLs 301 (344)
..+|.++.++|+..++++. .+.++.++++-.+.| |+++|++++.. ||++|+.+|+|+|=.+- -...+++.
T Consensus 107 -g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~ 185 (342)
T COG2008 107 -GADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALK 185 (342)
T ss_pred -CCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHH
Confidence 2468999999999887532 234566666554445 99999987754 48999999999985431 11124444
Q ss_pred C--CCCcEEEEccccCCCCCCCceEEEEE
Q 035915 302 L--HRPDFVLCNLDNTQNAQPSKITCLLI 328 (344)
Q Consensus 302 ~--l~~DFvv~S~HK~l~G~P~GiG~L~V 328 (344)
+ -.+|.++|++-|. .|.| +|++++
T Consensus 186 ~~~~~~D~v~~~~tK~-g~~~--~gAiv~ 211 (342)
T COG2008 186 TIKSYVDSVSFCLTKG-GGAP--VGAIVF 211 (342)
T ss_pred HHHhhCCEEEEecccC-Ccce--eeeEEE
Confidence 3 4799999999998 7767 566655
No 214
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=98.79 E-value=6.6e-08 Score=95.18 Aligned_cols=163 Identities=12% Similarity=0.049 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
..+.|+.||++++++++ +|++|+|+++++.++...+ ..+||.++.. -.|+. ....++..|.++..+|.+. + .
T Consensus 69 ~~~Lr~~ia~~~~~~~~--~I~it~G~~~~l~~~~~~~-~~~gd~vlv~~p~y~~--~~~~~~~~g~~~~~vp~~~-~-~ 141 (369)
T PRK08153 69 NHDLRHALAAHHGVAPE--NIMVGEGIDGLLGLIVRLY-VEPGDPVVTSLGAYPT--FNYHVAGFGGRLVTVPYRD-D-R 141 (369)
T ss_pred cHHHHHHHHHHhCCCHH--HEEEcCCHHHHHHHHHHHh-cCCCCEEEECCCcchH--HHHHHHHcCCeEEEeeCCC-C-C
Confidence 46799999999999876 7999999999999998876 4689986643 23331 1222344689999999864 2 3
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HH--hCCcEEEecccccCcCCc--cCCCCCCC-CcEE
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AH--RNSWHVLLDATALVVGED--RLNLALHR-PDFV 308 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar--~~g~~vlvDAaQa~~G~~--~LDLs~l~-~DFv 308 (344)
++.+++.+.+.. .+++++.++.-+| |+++|.+.+.+ ++ +.++++++|-+..-.+.. ...+.... --++
T Consensus 142 ~~~~~l~~~~~~----~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~i~ 217 (369)
T PRK08153 142 EDLDALLDAARR----ENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNVIR 217 (369)
T ss_pred CCHHHHHHHhcc----cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCEEE
Confidence 677777665542 2456776654445 99999976644 32 348899999986531111 11222212 2377
Q ss_pred EEccccCCCCCCCc--eEEEEEeCCCc
Q 035915 309 LCNLDNTQNAQPSK--ITCLLIRKKSF 333 (344)
Q Consensus 309 v~S~HK~l~G~P~G--iG~L~Vr~~~~ 333 (344)
+.|+=|. ||.| | +|+++..++..
T Consensus 218 ~~SfSK~-~g~~-GlRiG~~v~~~~~~ 242 (369)
T PRK08153 218 MRTFSKA-YGLA-GARVGYAIGAPGTI 242 (369)
T ss_pred EecchHh-ccCc-chheeeeecCHHHH
Confidence 8899999 8867 6 69998876544
No 215
>PRK09148 aminotransferase; Validated
Probab=98.79 E-value=1.3e-07 Score=94.43 Aligned_cols=166 Identities=9% Similarity=-0.019 Sum_probs=106.3
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 159 IQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 159 e~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+.|+.+|+++ | +++++ +|++|+|+++|+.+++..+ ..+||.|+ ..-.+.. ....+...|+++..+|.+
T Consensus 71 ~~lr~aia~~~~~~~g~~~~~~~-~I~it~G~~~al~~~~~~l-~~~gd~Vl~~~P~y~~--~~~~~~~~g~~v~~v~~~ 146 (405)
T PRK09148 71 PGLRRAQAAYYARRFGVKLNPDT-QVVATLGSKEGFANMAQAI-TAPGDVILCPNPSYPI--HAFGFIMAGGVIRSVPAE 146 (405)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCC-cEEEcCChHHHHHHHHHHh-cCCCCEEEEcCCCCcc--cHHHHHhcCCEEEEEeCC
Confidence 45777788776 4 44432 6999999999999999988 56899865 3344431 122234569999999886
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc--CCcc-CCCCC
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV--GEDR-LNLAL 302 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~--G~~~-LDLs~ 302 (344)
..+. ..+++++.++.. ..+++++.+..-+| |..+|.+.+. .|+++++++++|-+..-. +..+ ..+..
T Consensus 147 ~~~~--~~~~l~~~~~~~--~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~ 222 (405)
T PRK09148 147 PDEE--FFPALERAVRHS--IPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQ 222 (405)
T ss_pred CCCC--CccCHHHHHhhc--cccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhh
Confidence 4322 233455544321 12466777765455 9999985433 358899999999987530 1111 11211
Q ss_pred C----CCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 303 H----RPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 303 l----~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
+ +..+++.|+-|. ||.| | +|+++..+++.+
T Consensus 223 ~~~~~~~~i~~~SfSK~-~~~p-GlR~G~~v~~~~~i~ 258 (405)
T PRK09148 223 VPGAKDVTVEFTSMSKT-FSMA-GWRMGFAVGNERLIA 258 (405)
T ss_pred CCCccCcEEEEeccccc-cCCc-chheeeeeCCHHHHH
Confidence 1 234678999999 8867 6 999987765543
No 216
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.77 E-value=1.3e-07 Score=93.42 Aligned_cols=166 Identities=12% Similarity=0.049 Sum_probs=108.2
Q ss_pred HHHHHHHHHHc--------CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCe--EEEc-CCcCHHHHHHHHHcCCcEEEE
Q 035915 159 IQARNKVLKHC--------GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNF--YMTI-IGEELDYVREFASFKESKVIL 227 (344)
Q Consensus 159 e~AR~~IA~~L--------ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~--ivS~-~eH~~~~ir~la~~~G~kV~~ 227 (344)
.+.|+.||+++ |+++++ +|++|+|+++|+.+++..+ ..+|+. ++.. -.+. .....++..|++++.
T Consensus 67 ~~lr~aia~~~~~~~~~~~~~~~~~-~i~it~Ga~~al~~~~~~l-~~~gd~~~vlv~~P~y~--~~~~~~~~~g~~~~~ 142 (393)
T TIGR03538 67 PELRQAIARWLERRFDLPTGVDPER-HVLPVNGTREALFAFAQAV-INPGQAPLVVMPNPFYQ--IYEGAALLAGAEPYF 142 (393)
T ss_pred HHHHHHHHHHHHHhhCCcccCCCCc-eEEECCCcHHHHHHHHHHH-cCCCCcceEEecCCCCc--chHHHHHhcCCeEEE
Confidence 45778888877 355532 6999999999999999887 467875 4322 1222 123445667999999
Q ss_pred EeCCCCC-CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcC-C---c
Q 035915 228 APEAWLD-LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVG-E---D 296 (344)
Q Consensus 228 vp~~~~~-g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G-~---~ 296 (344)
+|.+..+ ..++.+++++.+.+ +++++.++.-+| |..++.+.+. .|+++++++++|-+-.-.- . .
T Consensus 143 v~~~~~~~~~~d~~~l~~~~~~-----~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~ 217 (393)
T TIGR03538 143 LNCTAENGFLPDFDAVPESVWR-----RCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNP 217 (393)
T ss_pred eeccccCCCCCCHHHHHHHHhh-----cceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCC
Confidence 9985332 34678888877754 356776664456 9999974443 3578999999999865311 0 1
Q ss_pred cCCC----CCCCC-----cEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 297 RLNL----ALHRP-----DFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 297 ~LDL----s~l~~-----DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
+..+ ...+. -+++.|+=|. |+.|. .+|+++..+++.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~vi~i~S~SK~-~~~~GlRvG~~i~~~~l~~ 264 (393)
T TIGR03538 218 PAGLLQAAAQLGRDDFRRCLVFHSLSKR-SNLPGLRSGFVAGDAEILK 264 (393)
T ss_pred CcCHHHhcccccccccccEEEEecchhh-cCCcccceEEEecCHHHHH
Confidence 1111 11111 2889999997 77663 4888887665543
No 217
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.76 E-value=1.1e-07 Score=96.50 Aligned_cols=170 Identities=9% Similarity=0.038 Sum_probs=112.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCC-
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWL- 233 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~- 233 (344)
...+.+|.+..|+++|++. ....|.|+|.|+..++.+. ..+||.|+..-.-|...+..+ .-.|++.++++....
T Consensus 65 ~G~I~eAe~~aA~~fGAd~---t~flvnGsT~g~~a~i~a~-~~~gd~VLv~RN~HkSv~~al-il~ga~Pvyi~p~~~~ 139 (417)
T PF01276_consen 65 EGIIKEAEELAARAFGADK---TFFLVNGSTSGNQAMIMAL-CRPGDKVLVDRNCHKSVYNAL-ILSGAIPVYIPPEDNE 139 (417)
T ss_dssp BTHHHHHHHHHHHHHTESE---EEEESSHHHHHHHHHHHHH-TTTTCEEEEETT--HHHHHHH-HHHTEEEEEEEEEE-T
T ss_pred ccHHHHHHHHHHHhcCCCe---EEEEecCchHHHHHHHHHh-cCCCCEEEEcCCcHHHHHHHH-HHcCCeEEEecCCccc
Confidence 3468899999999999962 3555677777888777765 478999876655341112222 124888888754321
Q ss_pred ---CCccCH-----HHHHHHhhhcCCCCCeeEEEEeCccc-cccccHHHHH-HHHhCCcEEEecccccCcCCccCC----
Q 035915 234 ---DLRIKG-----SQLSQYFRRKCKHTPKGLFSYPADIN-GTRYSMHWIS-EAHRNSWHVLLDATALVVGEDRLN---- 299 (344)
Q Consensus 234 ---~g~i~~-----~~L~~~l~~~~~~~~t~LVa~~avSN-G~i~Pl~~Ia-~ar~~g~~vlvDAaQa~~G~~~LD---- 299 (344)
-+.++. ++|+++++........++|.++.-+- |+.++++.|. .+|++++.++||.||.. |..+.
T Consensus 140 ~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGa--h~~F~~lp~ 217 (417)
T PF01276_consen 140 YGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTYYGVCYDIKEIAEICHKHGIPLLVDEAHGA--HFGFHPLPR 217 (417)
T ss_dssp TS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-TTSEEE-HHHHHHHHCCTECEEEEE-TT-T--TGGCSGGGT
T ss_pred cCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCCCeEEECHHHHHHHhcccCCEEEEEccccc--cccCCCCcc
Confidence 123555 88999887532111235677775443 9999998775 57999999999999985 33333
Q ss_pred -CCCCCCc-------EEEEccccCCCCCCCceEEEEEeCCC
Q 035915 300 -LALHRPD-------FVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 300 -Ls~l~~D-------Fvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
-..+++| +++-|.||. +++-+....|.++.+.
T Consensus 218 ~a~~~gad~~~~~~~~vvqS~HKt-L~altQts~lh~~~~~ 257 (417)
T PF01276_consen 218 SALALGADRPNDPGIIVVQSTHKT-LPALTQTSMLHVKGDR 257 (417)
T ss_dssp TCSSTTSS-CTSBEEEEEEEHHHH-SSS-TT-EEEEEETCC
T ss_pred chhhccCccccccceeeeechhhc-ccccccceEEEecCCC
Confidence 2347899 999999999 7778899999999885
No 218
>PRK10534 L-threonine aldolase; Provisional
Probab=98.76 E-value=5e-08 Score=93.85 Aligned_cols=166 Identities=14% Similarity=0.085 Sum_probs=105.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHH-HHcC-CcEEEEEeCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREF-ASFK-ESKVILAPEAWL 233 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~l-a~~~-G~kV~~vp~~~~ 233 (344)
...+.|+.|++++|+++ +++|.|+++++.+....+ ..+|++++.. ..|... .... +... +++++.++.+.
T Consensus 35 ~~~~L~~~la~~~g~~~----~~v~~~g~~a~~~~l~~~-~~~gd~vi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~- 107 (333)
T PRK10534 35 TVNALQDYAAELSGKEA----ALFLPTGTQANLVALLSH-CERGEEYIVGQAAHNYL-YEAGGAAVLGSIQPQPIDAAA- 107 (333)
T ss_pred HHHHHHHHHHHHhCCCe----EEEeCchHHHHHHHHHHh-cCCCCeeEEechhhhhH-hcCCchHHhcCceEEeecCCC-
Confidence 45778999999999853 468888888877665554 5688886532 233211 1100 1112 35666677654
Q ss_pred CCccCHHHHHHHhhhcCCC-CCeeEEEEeCccccccccHHHHH----HHHhCCcEEEecccccCcCCc---cCCCC--CC
Q 035915 234 DLRIKGSQLSQYFRRKCKH-TPKGLFSYPADINGTRYSMHWIS----EAHRNSWHVLLDATALVVGED---RLNLA--LH 303 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~-~~t~LVa~~avSNG~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~~---~LDLs--~l 303 (344)
+..++.++|+++++++... .++++|.+...+||+++|.+.+. .++++++++++|.++.. +.. ...+. ..
T Consensus 108 ~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~-~~~~~~~~~~~~~~~ 186 (333)
T PRK10534 108 DGTLPLDKVAAKIKPDDIHFARTRLLSLENTHNGKVLPREYLKQAWEFTRERNLALHVDGARIF-NAVVAYGCELKEITQ 186 (333)
T ss_pred CCCCCHHHHHHhhcccCcCcccceEEEEecCCCCeecCHHHHHHHHHHHHHcCCeEEeeHHHHH-HHHHHcCCCHHHHHh
Confidence 4678899998888541100 13677777744469999997664 35778999999998765 421 11111 11
Q ss_pred CCcEEEEccccCCCCCCCceEE-EEEeCCCc
Q 035915 304 RPDFVLCNLDNTQNAQPSKITC-LLIRKKSF 333 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~GiG~-L~Vr~~~~ 333 (344)
..|.+++|+.|. ||.| +|+ ++..++..
T Consensus 187 ~~~~~~~s~SK~-~~~~--~G~~~~~~~~~i 214 (333)
T PRK10534 187 YCDSFTICLSKG-LGTP--VGSLLVGNRDYI 214 (333)
T ss_pred cCCEEEEEeEcC-CCCc--ccceEEcCHHHH
Confidence 357777899998 8866 774 54455443
No 219
>PRK08175 aminotransferase; Validated
Probab=98.76 E-value=2.4e-07 Score=91.79 Aligned_cols=167 Identities=10% Similarity=0.013 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.|++++ | +++++ +|++|+|+++++++++..+ ..+|+.|+ ..-.+... ...++..|+++..+|.
T Consensus 69 ~~~lr~aia~~~~~~~g~~~~~~~-~i~~t~G~~~~l~~~~~~~-~~~gd~Vlv~~P~y~~~--~~~~~~~g~~~~~v~~ 144 (395)
T PRK08175 69 IPRLRRAISRWYQDRYDVDIDPES-EAIVTIGSKEGLAHLMLAT-LDHGDTVLVPNPSYPIH--IYGAVIAGAQVRSVPL 144 (395)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcHHHHHHHHHHh-CCCCCEEEEcCCCCcch--HHHHHHcCCeEEEEec
Confidence 345667777765 3 34432 5999999999999998877 57899865 33444311 1112346899999988
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHH---H-HHHHhCCcEEEecccccCc---CCccCCCC
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHW---I-SEAHRNSWHVLLDATALVV---GEDRLNLA 301 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~---I-a~ar~~g~~vlvDAaQa~~---G~~~LDLs 301 (344)
+..+ ...++|++.++.. ..+++++.+...+| |..++.+. | ..|+++|+++++|-+..-. +.....+.
T Consensus 145 ~~~~--~~~~~l~~~l~~~--~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~ 220 (395)
T PRK08175 145 VEGV--DFFNELERAIRES--YPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIM 220 (395)
T ss_pred ccCC--CcHHHHHHHHhhc--cCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchh
Confidence 7532 2467788777531 12467777764455 99999953 3 2358899999999876420 11112221
Q ss_pred C----CCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 302 L----HRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 302 ~----l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
. .+..+++.|+=|. ||.| | +|+++..+++.+
T Consensus 221 ~~~~~~~~~i~~~S~SK~-~g~p-GlRiG~~~~~~~l~~ 257 (395)
T PRK08175 221 QVPGAKDVAVEFFTLSKS-YNMA-GWRIGFMVGNPELVS 257 (395)
T ss_pred cCCCcccCEEEEeecccc-ccCc-chhheeeeCCHHHHH
Confidence 1 1233678999999 8877 5 798887665544
No 220
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=98.75 E-value=2.9e-07 Score=90.16 Aligned_cols=159 Identities=9% Similarity=0.044 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCC-Cc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLD-LR 236 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~-g~ 236 (344)
..+.|++||++++++++ +|++|+|+++++++++..+ .++..++..-.++ .+...++..|++++.+|.+..+ ..
T Consensus 56 ~~~lr~~ia~~~~~~~~--~i~it~Ga~~~l~~~~~~~--~~~~v~i~~P~y~--~~~~~~~~~g~~~~~~~~~~~~~~~ 129 (354)
T PRK06358 56 YLELRKRIASFEQLDLE--NVILGNGATELIFNIVKVT--KPKKVLILAPTFA--EYERALKAFDAEIEYAELTEETNFA 129 (354)
T ss_pred HHHHHHHHHHHhCCChh--hEEECCCHHHHHHHHHHHh--CCCcEEEecCChH--HHHHHHHHcCCeeEEEeCccccCCC
Confidence 46899999999999887 7999999999999999886 3344344222222 2334456679999999876432 24
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc--CCcc---CC-CCCCC
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV--GEDR---LN-LALHR 304 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~--G~~~---LD-Ls~l~ 304 (344)
++ +++.+.+.+ +++++.+..-+| |..++.+.+. .++++++++++|.+-.-. ...+ +. +...+
T Consensus 130 ~d-~~~~~~~~~-----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 203 (354)
T PRK06358 130 AN-EIVLEEIKE-----EIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFK 203 (354)
T ss_pred cc-HHHHHhhcc-----CCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCC
Confidence 66 455555533 356665554456 9999964333 357899999999985420 1001 11 11111
Q ss_pred CcEEEEccccCCCCCCC-ceEEEEEe
Q 035915 305 PDFVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
-=+++.|+=|. ||.|. .+|.+++.
T Consensus 204 ~vi~~~S~SK~-~gl~G~RiG~lv~~ 228 (354)
T PRK06358 204 NLIIIRAFTKF-FAIPGLRLGYGLTS 228 (354)
T ss_pred CEEEEEechhh-ccCcchhheeeecC
Confidence 22778999999 88663 48888774
No 221
>PRK07049 methionine gamma-lyase; Validated
Probab=98.73 E-value=4.8e-07 Score=91.75 Aligned_cols=162 Identities=11% Similarity=0.005 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcC-H-HHHHHHHHcCCcEEEEEeCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEE-L-DYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~-~-~~ir~la~~~G~kV~~vp~~~~ 233 (344)
.....++++|++.|++ ++++++|+++|+.++..++ .++||+++.. --+. . ..+...++..|++++.++..
T Consensus 84 t~~~Le~~lA~leg~~----~~iv~~sG~~Ai~~~l~al-~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~-- 156 (427)
T PRK07049 84 NSEIVEDRLAVYEGAE----SAALFSSGMSAIATTLLAF-VRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADG-- 156 (427)
T ss_pred CHHHHHHHHHHHhCCC----cEEEEccHHHHHHHHHHHH-hCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCC--
Confidence 4567888999999864 3777888888999888776 4689986533 2233 2 22344455679886666521
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHh------CCcEEEecccccC-cCCccCCCCCC
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHR------NSWHVLLDATALV-VGEDRLNLALH 303 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~------~g~~vlvDAaQa~-~G~~~LDLs~l 303 (344)
.+.+++++.+.+.....++++|.+..-+| |.++|++.+.+ ++. +++.+++|-+=+- +...++ ..
T Consensus 157 ---~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl---~~ 230 (427)
T PRK07049 157 ---LSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPL---EH 230 (427)
T ss_pred ---CCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCcc---cc
Confidence 34566776664322112577887776666 99999988765 454 6899999998322 022333 35
Q ss_pred CCcEEEEccccCCCCCCCc--eEEEEEeCCC
Q 035915 304 RPDFVLCNLDNTQNAQPSK--ITCLLIRKKS 332 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~ 332 (344)
++|+++.|+-|. ||+..| +|+++.++++
T Consensus 231 g~divv~S~SK~-~gG~~glr~G~vv~~~~l 260 (427)
T PRK07049 231 GADLSVYSLTKY-VGGHSDLVAGAVLGRKAL 260 (427)
T ss_pred CCCEEEEcCcee-ecCCCCcEEEEEECCHHH
Confidence 789999999999 885333 6776655543
No 222
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=98.72 E-value=2e-07 Score=90.98 Aligned_cols=164 Identities=11% Similarity=0.096 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCC-CC
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAWL-DL 235 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~-~g 235 (344)
..+.|+.||++++++++ +|++|+|+++++++++..+ .++||.++. .-.+.. ....+...|.+++.+|.+.. +.
T Consensus 67 ~~~lr~~ia~~~~~~~~--~I~it~G~~~al~~~~~~~-~~~gd~V~v~~P~y~~--~~~~~~~~g~~~~~~~l~~~~~~ 141 (357)
T PRK14809 67 HADLTAALADRWDVSPE--QVWLANGGDGALDYLARAM-LDPGDTVLVPDPGFAY--YGMSARYHHGEVREYPVSKADDF 141 (357)
T ss_pred HHHHHHHHHHHhCCCcc--eEEECCCHHHHHHHHHHHh-cCCCCEEEEeCCChHH--HHHHHHHcCCeEEEEecccCcCC
Confidence 45789999999999887 7999999999999999887 578998643 222221 12234456888888887532 23
Q ss_pred ccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HH--hCCcEEEecccccCcCCc--cCCC-CCCCCcE
Q 035915 236 RIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AH--RNSWHVLLDATALVVGED--RLNL-ALHRPDF 307 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar--~~g~~vlvDAaQa~~G~~--~LDL-s~l~~DF 307 (344)
.++.+++.+... +++++.++.-+| |+.+|.+.+.+ ++ +.++++++|-+..-.... .+.+ ...+--+
T Consensus 142 ~~~~~~~~~~~~------~~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi 215 (357)
T PRK14809 142 EQTADTVLDAYD------GERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVA 215 (357)
T ss_pred CcCHHHHHHhhc------CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEE
Confidence 455666655432 256666665556 99999976644 32 237889999987631111 1111 1111226
Q ss_pred EEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 308 VLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
++.|+=|. ||.| | +|.++..++..+
T Consensus 216 ~~~SfSK~-~~~~-GlRiG~~~~~~~~~~ 242 (357)
T PRK14809 216 VLRTFSKA-YGLA-GLRLGYAVVPEEWAD 242 (357)
T ss_pred EEecchhH-hcCc-chhheeeecCHHHHH
Confidence 77899999 8856 5 799888765544
No 223
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=98.72 E-value=5.4e-07 Score=90.14 Aligned_cols=160 Identities=15% Similarity=0.103 Sum_probs=107.7
Q ss_pred HHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 159 IQARNKVLKHC------GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 159 e~AR~~IA~~L------ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+.|+.||+++ +++++ +|++|+|+++|+.+++..+ ..+|+.++ ..-.++. ....++..|++++.++.+
T Consensus 77 ~~lr~aia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~~l-~~~gd~v~v~~P~y~~--~~~~~~~~g~~~~~~~~~ 151 (409)
T PLN00143 77 LPARRAIADYLSNDLPYQLSPD--DVYLTLGCKHAAEIIIKVL-ARPEANILLPRPGFPD--VETYAIFHHLEIRHFDLL 151 (409)
T ss_pred HHHHHHHHHHHHhhcCCCCCHh--hEEEecChHHHHHHHHHHH-cCCCCEEEEcCCCCcC--HHHHHHHcCCEEEEEecc
Confidence 44788888887 35655 7999999999999999987 46888864 3333331 233455578999888874
Q ss_pred C-CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc--CCcc-CCCC
Q 035915 232 W-LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV--GEDR-LNLA 301 (344)
Q Consensus 232 ~-~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~--G~~~-LDLs 301 (344)
. .+..++.++|++++++ +++++.+..-+| |.+++.+.+. .|+++++++++|-+..-. ...+ ..+.
T Consensus 152 ~~~~~~~d~~~l~~~~~~-----~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~ 226 (409)
T PLN00143 152 PEKGWEVDLDAVEAIADE-----NTIAMVIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMG 226 (409)
T ss_pred CCCCCcCCHHHHHHhccc-----CCEEEEEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchh
Confidence 2 2235788999887754 345555554456 9999975443 357899999999987530 1111 1122
Q ss_pred CCC---CcEEEEccccCCCCCCC-ceEEEEEe
Q 035915 302 LHR---PDFVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 302 ~l~---~DFvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
.+. .=+++.|+=|. |+.|. .+|.++..
T Consensus 227 ~~~~~~~vi~~~SfSK~-f~~pGlRvG~~v~~ 257 (409)
T PLN00143 227 LFASIVPVITLGSISKR-WMIPGWGLGWLVTC 257 (409)
T ss_pred hhcccCcEEEEccchhh-cCCCccceEEEEee
Confidence 121 23788999999 88773 48988883
No 224
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.71 E-value=1.2e-07 Score=93.78 Aligned_cols=193 Identities=18% Similarity=0.171 Sum_probs=117.0
Q ss_pred cCCCCCC---cccccchHHHHHHhhccC-C----CChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHH
Q 035915 122 FGSNLPD---LDRTQLEPSRLLDILTKK-S----SFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTP-NYRDAMMLVG 192 (344)
Q Consensus 122 ~Ga~lp~---~s~v~~~~~~L~~~L~gn-s----s~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTs-naTeAlnlva 192 (344)
|++. |+ .++++..++.+.+..--. | |.-+......+.+|++.+.++|+++ ++|+|.|.. |+|..+.++.
T Consensus 9 FsaG-Pa~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iP-d~Y~VlflqGGat~qf~~~p 86 (365)
T COG1932 9 FSAG-PAALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIP-DDYKVLFLQGGATGQFAMAP 86 (365)
T ss_pred CCCC-cccCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCC-CCceEEEEcCccHHHHHHHH
Confidence 5555 43 344555666666643211 1 1223344556799999999999996 689999995 8888888888
Q ss_pred hhCCCCCCC-eEE-EcCCcCHHHHHHHHHcCCc--EEEEEe-CCCCCCcc-CHHHHHHHhhhcCCCCCeeEEEEeCccc-
Q 035915 193 ESYPFFRGN-FYM-TIIGEELDYVREFASFKES--KVILAP-EAWLDLRI-KGSQLSQYFRRKCKHTPKGLFSYPADIN- 265 (344)
Q Consensus 193 ~sl~~~~Gd-~iv-S~~eH~~~~ir~la~~~G~--kV~~vp-~~~~~g~i-~~~~L~~~l~~~~~~~~t~LVa~~avSN- 265 (344)
.++--..+- .+. ..++.- +..+ |+..+. ++...- ....-+.+ +.+... +.+ ....|.+++..+
T Consensus 87 ~nLl~~~~~~yv~~g~Ws~~--a~~e-A~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~-----~~ayv~~~~NeTi 156 (365)
T COG1932 87 MNLLGKRGTDYVDTGAWSEF--AIKE-AKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSD-----NDAYVHFCWNETI 156 (365)
T ss_pred HhhhcccCceeEeeeehhHh--HHHH-HHHhcccccccccceeccCccCCCChhhcc--cCC-----CccEEEEecCCcc
Confidence 776433332 232 233311 1111 222221 111111 01001111 111100 111 134577776554
Q ss_pred -cccccH-HHHHHHHhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 266 -GTRYSM-HWISEAHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 266 -G~i~Pl-~~Ia~ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
|+..|. ..+. .+.++++|++..+ ...++|++. .|.+.++..|- +| |.|++++++|++++++
T Consensus 157 ~Gv~v~~~p~~~----~~~~~v~D~SS~i-lsr~iDvsk--~dviyagaQKn-lG-paGltvvIvr~~~l~r 219 (365)
T COG1932 157 SGVEVPELPDIG----SDGLLVADASSAI-LSRPIDVSK--YDVIYAGAQKN-LG-PAGLTVVIVRPDLLER 219 (365)
T ss_pred cceEccCCCCCC----CCceEEEecccHH-hcCCCChhH--cceEEEehhhc-cC-ccceEEEEEcHHHHhc
Confidence 887773 2221 1288999999999 999999985 79999999999 88 9999999999999887
No 225
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=98.71 E-value=2.1e-07 Score=91.03 Aligned_cols=152 Identities=13% Similarity=0.047 Sum_probs=96.5
Q ss_pred HHHHHHHHc-------CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCC
Q 035915 161 ARNKVLKHC-------GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAW 232 (344)
Q Consensus 161 AR~~IA~~L-------ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~ 232 (344)
.|+.+++++ |++++ +|++|+|+++++.++...+..++||.++. ...+. .....++..|++++.++.
T Consensus 61 lr~~ia~~~~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~v~~-- 134 (357)
T TIGR03539 61 LREAIVDWLERRRGVPGLDPT--AVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYP--TYEVGALLAGATPVAADD-- 134 (357)
T ss_pred HHHHHHHHHHHhcCCCCCCcC--eEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcH--HHHHHHHhcCCEEeccCC--
Confidence 455566655 46665 79999999999999887765678998764 33333 223334556888776531
Q ss_pred CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHH---H-HHHHhCCcEEEecccccCcCCccCCCCCC---
Q 035915 233 LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHW---I-SEAHRNSWHVLLDATALVVGEDRLNLALH--- 303 (344)
Q Consensus 233 ~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~---I-a~ar~~g~~vlvDAaQa~~G~~~LDLs~l--- 303 (344)
.+.+ .+ .+++++.++..+| |..+|.+. | +.|+++|+++++|.+........-.+..+
T Consensus 135 ------~~~l----~~----~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 200 (357)
T TIGR03539 135 ------PTEL----DP----VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPR 200 (357)
T ss_pred ------hhhc----Cc----cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecc
Confidence 1112 11 1467777765556 99999754 3 33588999999999875212111011111
Q ss_pred ------CCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 304 ------RPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 304 ------~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.-.+++.|+-|. ||.| | +|.++..++..+
T Consensus 201 ~~~~~~~~vi~~~S~SK~-~~~~-G~R~G~~i~~~~~~~ 237 (357)
T TIGR03539 201 VCGGDHTGLLAVHSLSKR-SNLA-GYRAGFVAGDPALVA 237 (357)
T ss_pred cCCCccccEEEEeccccc-cCCC-ceeEEEEecCHHHHH
Confidence 123888899998 8766 6 688877655443
No 226
>KOG2142 consensus Molybdenum cofactor sulfurase [Coenzyme transport and metabolism]
Probab=98.68 E-value=6e-09 Score=108.58 Aligned_cols=198 Identities=17% Similarity=0.124 Sum_probs=129.9
Q ss_pred cCCCCCCcccccchHHHHHHhhccCCCC---hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCC
Q 035915 122 FGSNLPDLDRTQLEPSRLLDILTKKSSF---PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFF 198 (344)
Q Consensus 122 ~Ga~lp~~s~v~~~~~~L~~~L~gnss~---~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~ 198 (344)
.|++++..++....+.....+-..|++. .++.....+++.|-+|..+++.+..+|.++||. .|+|+++++++|||-
T Consensus 27 ag~tl~sesq~~g~~~~sq~~e~~nphs~~~ts~~l~~~v~Q~r~ril~~f~tta~dy~v~lp~-~t~al~~vae~fp~~ 105 (728)
T KOG2142|consen 27 AGRTLFSESQLEGVAFQSQSSENANPHSHLGTSRSLARLVAQVRLRILALFNTTAFDYEVSLPA-LTEALKLVAEAFPFY 105 (728)
T ss_pred hhhhhhhhcccchhhhhhhccccCCCcccccchHHHHHHHHHHHHHHHHHhccccccccchhHH-HHHHHHHHHHhCccc
Confidence 6889898888777666666655555322 344455677999999999999998999999999 999999999999984
Q ss_pred -CCCeE---EEcC-CcCHHH---HHHHHHcCCcEEEEE-eCC--CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--
Q 035915 199 -RGNFY---MTII-GEELDY---VREFASFKESKVILA-PEA--WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-- 265 (344)
Q Consensus 199 -~Gd~i---vS~~-eH~~~~---ir~la~~~G~kV~~v-p~~--~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-- 265 (344)
.+.++ =+.. .|-+.. ++. ...|+-+..+ ... |. . +...+.+... +. ....|++.++++|
T Consensus 106 s~tekid~lrs~~y~hls~s~~~~~~--~~~~~gl~sy~q~~~i~~-~--~~~sls~~~~-~l--s~~~L~~g~a~~nfe 177 (728)
T KOG2142|consen 106 SQTEKIDNLRSDEYGHLSSSGHLMRL--DYSGIGLFSYSQTNEISD-S--EEFSLSESEA-NL--SEHSLFGGAAQSNFE 177 (728)
T ss_pred cccccccchhhhhhcccccccceeee--eeeccceEEeeeeeeccc-c--cccccccccc-Cc--ccchhcccchhcccc
Confidence 23222 1111 111111 111 1112222221 111 11 1 1111111111 11 1357999999998
Q ss_pred cccccHHHHHHHH-hCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 266 GTRYSMHWISEAH-RNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 266 G~i~Pl~~Ia~ar-~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
|.++-...+..++ ..+|+++||++..+ ...+||++..++||... ++|+ ||+|+ |+|.+.++..
T Consensus 178 g~kik~ri~d~L~ipe~~y~lldtaSrv-Saf~Ldaesy~f~~~~~-llti-Fgyet--gAvlv~~r~A 241 (728)
T KOG2142|consen 178 GDKIKLRIMDRLNIPESEYVLLDTASRV-SAFPLDAESYPFDFNPK-LLTI-FGYET--GAVLVMNRSA 241 (728)
T ss_pred cceeeeeeecccccCCceEEEEEeeccc-ccccchHhhCCCcccch-heee-cCCCc--hhhHHHhhhh
Confidence 8873333334443 57999999999999 99999999999999999 9999 99997 7777765543
No 227
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=98.68 E-value=2.1e-06 Score=86.42 Aligned_cols=161 Identities=12% Similarity=0.006 Sum_probs=111.8
Q ss_pred ChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEE
Q 035915 149 FPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKV 225 (344)
Q Consensus 149 ~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV 225 (344)
..++...-......++++.+-|+. .++.++++-.|+..+..++ .++||+++ +..-+. ...++.+..+.|+++
T Consensus 48 ~Y~R~gnPt~~~le~~la~Le~g~----~a~~~~SGmaAi~~~l~~l-l~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v 122 (386)
T PF01053_consen 48 IYSRYGNPTVRALEQRLAALEGGE----DALLFSSGMAAISAALLAL-LKPGDHIVASDDLYGGTYRLLEELLPRFGVEV 122 (386)
T ss_dssp SBTTTC-HHHHHHHHHHHHHHT-S----EEEEESSHHHHHHHHHHHH-S-TTBEEEEESSSSHHHHHHHHHCHHHTTSEE
T ss_pred ceeccccccHHHHHHHHHHhhccc----ceeeccchHHHHHHHHHhh-cccCCceEecCCccCcchhhhhhhhcccCcEE
Confidence 345555566778888899999983 4666788888887777776 57899965 333344 334555566789999
Q ss_pred EEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCC-cEEEecccccCcCC--ccCC
Q 035915 226 ILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNS-WHVLLDATALVVGE--DRLN 299 (344)
Q Consensus 226 ~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g-~~vlvDAaQa~~G~--~~LD 299 (344)
.+++.+ +.++|++++++ +|++|-+-..+| ..+.||+.|++ +|++| +.++||.+-+- +. .|++
T Consensus 123 ~~~d~~------d~~~l~~~l~~-----~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~at-p~~~~pL~ 190 (386)
T PF01053_consen 123 TFVDPT------DLEALEAALRP-----NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTFAT-PYNQNPLE 190 (386)
T ss_dssp EEESTT------SHHHHHHHHCT-----TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTTTH-TTTC-GGG
T ss_pred EEeCch------hHHHHHhhccc-----cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccccc-eeeeccCc
Confidence 888653 56789999976 488888887777 89999988865 69998 99999999876 42 2333
Q ss_pred CCCCCCcEEEEccccCCCCCCCc--eEEEEEeC
Q 035915 300 LALHRPDFVLCNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 300 Ls~l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
+++|+++-|+-|+ ++|-.. .|+++++.
T Consensus 191 ---~GaDivv~S~TKy-l~Ghsdv~~G~vv~~~ 219 (386)
T PF01053_consen 191 ---LGADIVVHSATKY-LSGHSDVMGGAVVVNG 219 (386)
T ss_dssp ---GT-SEEEEETTTT-TTTSSSE-EEEEEESS
T ss_pred ---CCceEEEeecccc-ccCCcceeeEEEEECc
Confidence 6799999999999 776632 56666654
No 228
>PRK08068 transaminase; Reviewed
Probab=98.68 E-value=5.8e-07 Score=88.79 Aligned_cols=166 Identities=10% Similarity=0.049 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|++||+++ | +++++ +|+.|+|+++++.+++..+ ..+|+.++ ..-.+. .....++..|++++.+|.
T Consensus 72 ~~~lr~aia~~~~~~~g~~~~~~~-~i~it~G~~~~l~~~~~~~-~~~gd~vlv~~P~y~--~~~~~~~~~g~~~~~i~~ 147 (389)
T PRK08068 72 YPFLKEAAADFYKREYGVTLDPET-EVAILFGGKAGLVELPQCL-MNPGDTILVPDPGYP--DYLSGVALARAQFETMPL 147 (389)
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCc-cEEEcCCcHHHHHHHHHHh-CCCCCEEEEcCCCCc--chHHHHHhcCCEEEEeec
Confidence 345777777776 5 45542 5999999999999988877 46888754 333332 122334557999999998
Q ss_pred CCC-CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc---CCccCCC
Q 035915 231 AWL-DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV---GEDRLNL 300 (344)
Q Consensus 231 ~~~-~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~---G~~~LDL 300 (344)
+.. +..++.+++++.++. ++++|.+..-+| |++++.+.+. .++++++++++|-+..-. +..+..+
T Consensus 148 ~~~~~~~~d~~~l~~~~~~-----~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~ 222 (389)
T PRK08068 148 IAENNFLPDYTKIPEEVAE-----KAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSF 222 (389)
T ss_pred ccccCCCCCHHHHHHhccc-----cceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcCh
Confidence 643 234677888877754 356666653345 9999996543 347889999999987420 1112221
Q ss_pred -C---CCCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 301 -A---LHRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 301 -s---~l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
. ..+..+++.|+=|. ||.| | +|.++..++..+
T Consensus 223 ~~~~~~~~~~i~~~S~SK~-~g~~-GlRiG~~~~~~~l~~ 260 (389)
T PRK08068 223 LQTPGAKDVGIELYTLSKT-FNMA-GWRVAFAVGNESVIE 260 (389)
T ss_pred hhCCCccCCEEEEecchhc-cCCc-cceeEeEecCHHHHH
Confidence 1 11234788899999 8866 6 899987765543
No 229
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.66 E-value=2.1e-07 Score=93.38 Aligned_cols=156 Identities=17% Similarity=0.191 Sum_probs=104.5
Q ss_pred HHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHH----HHHHHHHcCCcEEEEEeCCCCCCccCHHHH
Q 035915 167 KHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELD----YVREFASFKESKVILAPEAWLDLRIKGSQL 242 (344)
Q Consensus 167 ~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~----~ir~la~~~G~kV~~vp~~~~~g~i~~~~L 242 (344)
.+++++-.+ .++.+.|.+.|+-++..++. .+.+++...+|.++ .+....+..|++++.+-.. .+-...++
T Consensus 76 ~~~~~~~ae-a~~ivnnn~aAVll~~~al~--~~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t---n~t~~~d~ 149 (395)
T COG1921 76 LLCGLTGAE-AAAIVNNNAAAVLLTLNALA--EGKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT---NRTHLKDY 149 (395)
T ss_pred HHhcccchh-heeeECCcHHHHHHHHhhhc--cCCeEEEEccccccCCCCChhHHHHHcCCEEEEeccc---CcCCHHHH
Confidence 345554222 57778888888877777764 35554433333321 2445556679988877543 34577889
Q ss_pred HHHhhhcCCCCCeeEEEEeCccc-ccc--ccHHHH-HHHHhCCcEEEecccccCcCCccCCCC---CCCCcEEEEccccC
Q 035915 243 SQYFRRKCKHTPKGLFSYPADIN-GTR--YSMHWI-SEAHRNSWHVLLDATALVVGEDRLNLA---LHRPDFVLCNLDNT 315 (344)
Q Consensus 243 ~~~l~~~~~~~~t~LVa~~avSN-G~i--~Pl~~I-a~ar~~g~~vlvDAaQa~~G~~~LDLs---~l~~DFvv~S~HK~ 315 (344)
+.++.++ |.+.-..+.+| |.. ++++.+ ..+|++|+++++|++...+=....+++ +.++|.+++|+||+
T Consensus 150 ~~AIne~-----ta~llkV~s~~~~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKl 224 (395)
T COG1921 150 ELAINEN-----TALLLKVHSSNYGFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKL 224 (395)
T ss_pred HHHhccC-----CeeEEEEeeccccccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchh
Confidence 9999863 56666666666 443 456545 557999999999998865101123444 36899999999999
Q ss_pred CCCCCCceEEEEEeCCCccc
Q 035915 316 QNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 316 l~G~P~GiG~L~Vr~~~~~~ 335 (344)
||||+ .|++..|+++.+.
T Consensus 225 -lgGPq-aGii~GkKelI~~ 242 (395)
T COG1921 225 -LGGPQ-AGIIVGKKELIEK 242 (395)
T ss_pred -cCCCc-cceEechHHHHHH
Confidence 99997 8999999887654
No 230
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=98.64 E-value=7.6e-07 Score=88.16 Aligned_cols=166 Identities=13% Similarity=0.049 Sum_probs=107.9
Q ss_pred HHHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhhCCCCC---CCeEEEc-CCcCHHHHHHHHHcCCcEEEE
Q 035915 159 IQARNKVLKHC----G---LPDDEYLVLFTPNYRDAMMLVGESYPFFR---GNFYMTI-IGEELDYVREFASFKESKVIL 227 (344)
Q Consensus 159 e~AR~~IA~~L----g---a~p~ey~VVFTsnaTeAlnlva~sl~~~~---Gd~ivS~-~eH~~~~ir~la~~~G~kV~~ 227 (344)
.+.|+.||+++ | +++++ +|+.|+|+++|+.+++..+. .+ |+.++.. -.+. .....++..|++++.
T Consensus 68 ~~lr~~ia~~~~~~~g~~~~~~~~-~i~it~G~~~al~~~~~~l~-~~~~~gd~vlv~~P~y~--~~~~~~~~~g~~~~~ 143 (396)
T PRK09147 68 PALREAIAAWLERRYGLPALDPAT-QVLPVNGSREALFAFAQTVI-DRDGPGPLVVCPNPFYQ--IYEGAALLAGAEPYF 143 (396)
T ss_pred HHHHHHHHHHHHHHhCCCcCCccc-eEEECCChHHHHHHHHHHHc-CCCCCCCEEEEcCCCcc--chHHHHHhcCCEEEE
Confidence 34677777765 6 44432 69999999999999998873 56 7775532 2222 123334557999999
Q ss_pred EeCCCCC-CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc--CC--c
Q 035915 228 APEAWLD-LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV--GE--D 296 (344)
Q Consensus 228 vp~~~~~-g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~--G~--~ 296 (344)
+|.+..+ ..++.++|++.+.+ +++++.++.-+| |.+++.+.+. .|+++++++++|=+-.-. .. .
T Consensus 144 vp~~~~~~~~~d~~~l~~~~~~-----~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 218 (396)
T PRK09147 144 LNCDPANNFAPDFDAVPAEVWA-----RTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAP 218 (396)
T ss_pred eccCccccCccCHHHHHHHHhh-----ccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCC
Confidence 9986432 25788888877654 356666654446 9999886554 347899999999886531 11 1
Q ss_pred cCC-CC---CCCCc-----EEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 297 RLN-LA---LHRPD-----FVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 297 ~LD-Ls---~l~~D-----Fvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
+.. ++ ..+.| +++.|+=|. ||.|. .+|.++..+++.+
T Consensus 219 ~~~~~~~~~~~~~~~~~~vi~~~S~SK~-~~~~GlRiG~~~~~~~l~~ 265 (396)
T PRK09147 219 PLGLLEAAAELGRDDFKRLVVFHSLSKR-SNVPGLRSGFVAGDAALLK 265 (396)
T ss_pred CchhhhhccccCccccccEEEEeccccc-cCCccceeeeecCCHHHHH
Confidence 111 11 11222 889999998 77672 4898887765544
No 231
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=98.61 E-value=1e-06 Score=86.85 Aligned_cols=166 Identities=10% Similarity=0.047 Sum_probs=107.4
Q ss_pred HHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 159 IQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 159 e~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+.|+.||+++ | +++++ +|+.|+|+++|+.++...+ ..+||.++ ..-.+.. ....++..|++++.+|.+
T Consensus 71 ~~lr~aia~~~~~~~g~~~~~~~-~I~it~Gs~~al~~~~~~l-~~~gd~Vlv~~P~y~~--~~~~~~~~g~~~~~v~~~ 146 (388)
T PRK07366 71 LDFREAAAQWYEQRFGLAVDPET-EVLPLIGSQEGTAHLPLAV-LNPGDFALLLDPGYPS--HAGGVYLAGGQIYPMPLR 146 (388)
T ss_pred HHHHHHHHHHHHHhhCCcCCCcC-eEEECCCcHHHHHHHHHHh-CCCCCEEEEcCCCCcc--hHHHHHhcCCEEEEEECC
Confidence 45777788877 4 55542 5999999999999999876 35899864 2222221 233345579999999986
Q ss_pred CCC-CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCc---CCc-cCCC
Q 035915 232 WLD-LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVV---GED-RLNL 300 (344)
Q Consensus 232 ~~~-g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~---G~~-~LDL 300 (344)
..+ ..++.+++.+.+.+ +++++.++.-+| |..++.+.+.+ |+++++++++|-+-.-. +.. ...+
T Consensus 147 ~~~~~~~d~~~l~~~~~~-----~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~ 221 (388)
T PRK07366 147 AENDFLPVFADIPTEVLA-----QARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSI 221 (388)
T ss_pred CccCCCCCHHHHHHhhcc-----cceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCCh
Confidence 432 23566677666543 356666654446 99999965543 47889999999765420 111 1122
Q ss_pred CCCC----CcEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 301 ALHR----PDFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 301 s~l~----~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
..+. .-+++.|+=|. ||.|. .+|.++..+++.+
T Consensus 222 ~~~~~~~~~vi~~~SfSK~-~g~~GlRiG~~v~~~~li~ 259 (388)
T PRK07366 222 LQADPEKSVSIEFFTLSKS-YNMGGFRIGFAIGNAQLIQ 259 (388)
T ss_pred hhCCCCcccEEEEeecccc-cCCcchhheehcCCHHHHH
Confidence 2221 23677899999 87673 4888887765544
No 232
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=98.60 E-value=5.8e-07 Score=87.87 Aligned_cols=154 Identities=14% Similarity=0.094 Sum_probs=97.3
Q ss_pred HHHHHHHHHc----C---CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 160 QARNKVLKHC----G---LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 160 ~AR~~IA~~L----g---a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
+.|+.|++++ | ++++ +|++|+|+++++.+++..+...+|+.|+. ...|.. ....++..|+++..++.
T Consensus 66 ~lr~~ia~~l~~~~~~~~~~~~--~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~- 140 (364)
T PRK07865 66 ELREAIVGWLARRRGVTGLDPA--AVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPT--YEVGARLAGATVVRADS- 140 (364)
T ss_pred HHHHHHHHHHHHHcCCCCCCcc--cEEEccChHHHHHHHHHHHcCCCCCEEEECCCCccc--HHHHHHhcCCEEEecCC-
Confidence 4566777776 4 5565 79999999999999877765578998653 333331 22334456888877642
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcCCccCCCCC---
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVGEDRLNLAL--- 302 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~~~LDLs~--- 302 (344)
.+++.+ .+++++.+...+| |.+++.+.+. .++++|+++++|-+..-.....-.+..
T Consensus 141 -------~~~l~~--------~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 205 (364)
T PRK07865 141 -------LTELGP--------QRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDP 205 (364)
T ss_pred -------hhhCCc--------ccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccc
Confidence 122211 1356777764556 9999985443 357899999999997731111000111
Q ss_pred ------CCCcEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 303 ------HRPDFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 303 ------l~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
.+-.+++.|+-|. ||.|. .+|+++..++..+
T Consensus 206 ~~~~~~~~~~i~~~S~SK~-~~~~GlRiG~i~~~~~~~~ 243 (364)
T PRK07865 206 RVCGGDHTGLLAVHSLSKQ-SNLAGYRAGFVAGDPALVA 243 (364)
T ss_pred cccCCccceEEEEeechhc-cCCCceeeEEEecCHHHHH
Confidence 1224899999999 87662 3888877655433
No 233
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=98.57 E-value=1.1e-06 Score=86.48 Aligned_cols=170 Identities=7% Similarity=0.005 Sum_probs=110.2
Q ss_pred HHHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCC-eEE-EcCCcCHHHHHHHHHcCCcEEEE
Q 035915 158 EIQARNKVLKHCG--------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGN-FYM-TIIGEELDYVREFASFKESKVIL 227 (344)
Q Consensus 158 le~AR~~IA~~Lg--------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd-~iv-S~~eH~~~~ir~la~~~G~kV~~ 227 (344)
..+.|+.||++++ ++++ +|++|+|+++++.+++.++- .+|+ .++ ..-. .......++..|++++.
T Consensus 68 ~~~Lr~aia~~~~~~~~~~~~v~~~--~I~it~Ga~~al~~~~~~~~-~~g~~~Vlv~~P~--y~~~~~~~~~~g~~~~~ 142 (374)
T PRK02610 68 HEALKQAIAEYVNESAAGSSQITPA--NISVGNGSDELIRSLLIATC-LGGEGSILVAEPT--FSMYGILAQTLGIPVVR 142 (374)
T ss_pred hHHHHHHHHHHhCccccccCCCCHH--HEEEcCChHHHHHHHHHHHc-CCCCCeEEEcCCC--hHHHHHHHHHcCCEEEE
Confidence 4668899999988 6665 79999999999987665542 2454 443 2222 22234556667999999
Q ss_pred EeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHH--hCCcEEEecccccCc-CCccC-CCC
Q 035915 228 APEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAH--RNSWHVLLDATALVV-GEDRL-NLA 301 (344)
Q Consensus 228 vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar--~~g~~vlvDAaQa~~-G~~~L-DLs 301 (344)
+|.+..+..++.++|+++++.. ...+++++.++.-+| |+.++.+++..+. .+++++++|-+-.-. +...+ .+.
T Consensus 143 ~~~~~~~~~~d~~~l~~~~~~~-~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~~~~~~ 221 (374)
T PRK02610 143 VGRDPETFEIDLAAAQSAIEQT-QNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTLVGELA 221 (374)
T ss_pred ecCCcccCCCCHHHHHHHHHhh-cCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccchHHHHh
Confidence 9876433468889998887530 001467776654455 9999997776543 248999999886521 11111 122
Q ss_pred CCCCcEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 302 LHRPDFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 302 ~l~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
...-=+++.|+=|. ||.|. .+|+++..+++.+
T Consensus 222 ~~~~~ivi~SfSK~-~g~~GlRiG~~v~~~~l~~ 254 (374)
T PRK02610 222 QHPNWVILRTFSKA-FRLAAHRVGYAIGHPELIA 254 (374)
T ss_pred cCCCEEEEEecchh-ccCcccceeeeecCHHHHH
Confidence 11112778999999 87673 4898887665543
No 234
>PTZ00377 alanine aminotransferase; Provisional
Probab=98.56 E-value=8.9e-07 Score=90.56 Aligned_cols=168 Identities=7% Similarity=-0.084 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 157 PEIQARNKVLKHCG------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 157 ~le~AR~~IA~~Lg------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
-+.+.|+.||++++ ++++ +|++|+|+++|+.+++..+-..+||.|+. .-.++ .....++..|.+++.+|
T Consensus 116 G~~~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~--~y~~~~~~~g~~~v~v~ 191 (481)
T PTZ00377 116 GYPFVRKAVAAFIERRDGVPKDPS--DIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYP--LYSAAITLLGGKQVPYY 191 (481)
T ss_pred CCHHHHHHHHHHHHHhcCCCCChh--hEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCch--hHHHHHHHcCCEEEEEE
Confidence 35668888888875 4555 79999999999999998874368998653 33333 12334455799999998
Q ss_pred CCCCC-CccCHHHHHHHhhhcCC-CCCeeEEEEeCccc--cccccHHHH---H-HHHhCCcEEEecccccCcCC---cc-
Q 035915 230 EAWLD-LRIKGSQLSQYFRRKCK-HTPKGLFSYPADIN--GTRYSMHWI---S-EAHRNSWHVLLDATALVVGE---DR- 297 (344)
Q Consensus 230 ~~~~~-g~i~~~~L~~~l~~~~~-~~~t~LVa~~avSN--G~i~Pl~~I---a-~ar~~g~~vlvDAaQa~~G~---~~- 297 (344)
.+..+ ..++.++|++.+.+..+ ..+++++.+..-+| |.+++.+.+ . .|++++++++.|-+-.-.-. .+
T Consensus 192 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~ 271 (481)
T PTZ00377 192 LDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPF 271 (481)
T ss_pred eccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCc
Confidence 76432 35788999988864100 01466665554455 999996443 3 35889999999987542000 01
Q ss_pred CCC----CCCCCc-------EEEEccccCCCCCCC-ceEEEEE
Q 035915 298 LNL----ALHRPD-------FVLCNLDNTQNAQPS-KITCLLI 328 (344)
Q Consensus 298 LDL----s~l~~D-------Fvv~S~HK~l~G~P~-GiG~L~V 328 (344)
..+ ..+..+ +++.|+=|.+++.|- .+|.+++
T Consensus 272 ~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~ 314 (481)
T PTZ00377 272 ISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFEL 314 (481)
T ss_pred ccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEE
Confidence 111 111111 566799996245342 4788876
No 235
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=98.53 E-value=3.8e-06 Score=85.65 Aligned_cols=167 Identities=10% Similarity=0.064 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEE
Q 035915 158 EIQARNKVLKHCG--------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILA 228 (344)
Q Consensus 158 le~AR~~IA~~Lg--------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~v 228 (344)
..+.|+.||+|++ ++|+ +|++|+|+|+|+.+++.++ ..+||.++. .-.++. ....+..+.|++++.+
T Consensus 97 ~~~LR~aiA~~l~~~~~~~~~v~p~--~Ivit~G~t~al~~l~~~l-~~pGD~Vlv~~P~Y~~-f~~~~~~~~g~~vv~v 172 (447)
T PLN02607 97 LKSFRQAMASFMEQIRGGKARFDPD--RIVLTAGATAANELLTFIL-ADPGDALLVPTPYYPG-FDRDLRWRTGVKIVPI 172 (447)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcCHH--HeEEcCChHHHHHHHHHHh-CCCCCEEEEcCCCCcc-hHHHHHhcCCcEEEEE
Confidence 4568888888875 4555 7999999999999999887 468998652 222331 1122233468999888
Q ss_pred eCCCCC-CccCHHHHHHHhhhc-CCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcCC---cc
Q 035915 229 PEAWLD-LRIKGSQLSQYFRRK-CKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVGE---DR 297 (344)
Q Consensus 229 p~~~~~-g~i~~~~L~~~l~~~-~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~---~~ 297 (344)
+.+..+ ..++.+.++++++.. ....+++++.++.-+| |..+|-+.+. .|+++++++++|-+-+. .. .+
T Consensus 173 ~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~-~~f~~~~ 251 (447)
T PLN02607 173 HCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSG-SVFSASE 251 (447)
T ss_pred eCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccc-cccCCCC
Confidence 876432 247888888887531 0112467777765556 9999976543 35789999999998663 21 11
Q ss_pred -CCCC----CCC----Cc--EEEEccccCCCCCCC-ceEEEEEeC
Q 035915 298 -LNLA----LHR----PD--FVLCNLDNTQNAQPS-KITCLLIRK 330 (344)
Q Consensus 298 -LDLs----~l~----~D--Fvv~S~HK~l~G~P~-GiG~L~Vr~ 330 (344)
..+. ..+ .+ .++.|+=|. ||.|- .+|+++..+
T Consensus 252 f~S~~s~~~~~~~~~~~~~v~vi~s~SK~-fg~~GlRvG~ivs~n 295 (447)
T PLN02607 252 FVSVAEIVEARGYKGVAERVHIVYSLSKD-LGLPGFRVGTIYSYN 295 (447)
T ss_pred cccHHHHHhhcCCCCCcCcEEEEEcchhc-CCCCcceEEEEEEcC
Confidence 1110 111 22 567899998 88673 479999843
No 236
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=98.52 E-value=2.7e-06 Score=85.37 Aligned_cols=161 Identities=8% Similarity=-0.026 Sum_probs=106.8
Q ss_pred HHHHHHHHHHcC--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCCCC
Q 035915 159 IQARNKVLKHCG--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAWLDL 235 (344)
Q Consensus 159 e~AR~~IA~~Lg--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~~g 235 (344)
.+.|+.++++++ ..+++ +|+.|+|+++|+.+++..+ ..+||.++. .-.+. .....++..|++++.+|.+. ++
T Consensus 124 ~~lr~~ia~~~~~~~~~~~-~Iiit~G~~~al~~~~~~l-~~pgd~Vlv~~P~y~--~~~~~~~~~g~~~~~v~~~~-~g 198 (431)
T PRK15481 124 PELHAWAARWLRDDCPVAF-EIDLTSGAIDAIERLLCAH-LLPGDSVAVEDPCFL--SSINMLRYAGFSASPVSVDA-EG 198 (431)
T ss_pred HHHHHHHHHHHhhccCCcC-eEEEecCcHHHHHHHHHHh-CCCCCEEEEeCCCcH--HHHHHHHHcCCeEEeeccCC-CC
Confidence 447778888876 33322 7999999999999999987 368998642 22222 23444566799999999864 33
Q ss_pred ccCHHHHHHHhhhcCCCCCeeEEEEe-Cccc--cccccHH---HHH-HHHhC-CcEEEecccccCc---CCc-cCCCCCC
Q 035915 236 RIKGSQLSQYFRRKCKHTPKGLFSYP-ADIN--GTRYSMH---WIS-EAHRN-SWHVLLDATALVV---GED-RLNLALH 303 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~~~~~t~LVa~~-avSN--G~i~Pl~---~Ia-~ar~~-g~~vlvDAaQa~~---G~~-~LDLs~l 303 (344)
++.+.|++++++ +++++.+. .-+| |+.++.+ .|. .|+++ +++++.|-+..-. +.. .+.. ..
T Consensus 199 -~~~~~l~~~~~~-----~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~ 271 (431)
T PRK15481 199 -MQPEKLERALAQ-----GARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQ-TT 271 (431)
T ss_pred -CCHHHHHHHHhc-----CCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcC-CC
Confidence 788999888864 24554443 4445 9999996 443 35777 9999999765420 111 1111 11
Q ss_pred CCcEEEEccccCCCCCCC-ceEEEEEeCCCc
Q 035915 304 RPDFVLCNLDNTQNAQPS-KITCLLIRKKSF 333 (344)
Q Consensus 304 ~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~ 333 (344)
+--+++.|+-|. || |. .+|+++..++..
T Consensus 272 ~~vi~~~SfSK~-~~-~GlRiG~~i~~~~~~ 300 (431)
T PRK15481 272 QRWALIRSVSKA-LG-PDLRLAFVASDSATS 300 (431)
T ss_pred CCEEEEeeeccc-cC-CCceeEEEeCCHHHH
Confidence 234889999999 88 82 478877765543
No 237
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.48 E-value=7.2e-06 Score=81.76 Aligned_cols=160 Identities=12% Similarity=-0.008 Sum_probs=116.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcC-CcC--HHHHHHHHHcCCcEEEEEeCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTII-GEE--LDYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~-eH~--~~~ir~la~~~G~kV~~vp~~~~ 233 (344)
..+...++||.+=|--. -+.|+++..|+-+++..+ .++||+|++.- =+. .+......++.|++|+++..+
T Consensus 63 T~~vlE~RiAaLEGG~a----a~a~aSG~AA~~~ai~~l-a~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~-- 135 (426)
T COG2873 63 TTDVLEERIAALEGGVA----ALAVASGQAAITYAILNL-AGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPD-- 135 (426)
T ss_pred hHHHHHHHHHHhhcchh----hhhhccchHHHHHHHHHh-ccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCC--
Confidence 34556667887777542 255666667776666666 36899987432 233 444455557789999998754
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEEE
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLC 310 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~ 310 (344)
+.+.+++.+++ +|++|-+-...| +.+.|++.|++ ||++|++++||-+=+- +.. +.--++++|.++-
T Consensus 136 ----d~~~~~~aI~~-----nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~at-pyl-~rP~~hGADIVvH 204 (426)
T COG2873 136 ----DPENFEAAIDE-----NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFAT-PYL-CRPIEHGADIVVH 204 (426)
T ss_pred ----CHHHHHHHhCc-----ccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCCc-cee-cchhhcCCCEEEE
Confidence 46789999987 477777776777 99999999976 6999999999998776 432 2223479999999
Q ss_pred ccccCCCCC-CCceEEEEEeCCCccc
Q 035915 311 NLDNTQNAQ-PSKITCLLIRKKSFDT 335 (344)
Q Consensus 311 S~HK~l~G~-P~GiG~L~Vr~~~~~~ 335 (344)
|.-|| .|| -..+|..+|....++-
T Consensus 205 S~TK~-igGhGt~iGG~iVD~G~FDw 229 (426)
T COG2873 205 SATKY-IGGHGTAIGGVIVDGGKFDW 229 (426)
T ss_pred eeccc-ccCCccccceEEEeCCcccc
Confidence 99999 665 4468999998877765
No 238
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.48 E-value=3.8e-07 Score=88.99 Aligned_cols=171 Identities=12% Similarity=0.017 Sum_probs=119.9
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCC---CCeEEEc-CCcC--HHHHHHHHHcCCcEEE----EE
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFR---GNFYMTI-IGEE--LDYVREFASFKESKVI----LA 228 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~---Gd~ivS~-~eH~--~~~ir~la~~~G~kV~----~v 228 (344)
+-.-.-++..+||... +|....+-|--++.+.-+| +++ ...|+-. -..+ .-++..-++-.|..+. .+
T Consensus 114 e~il~l~~~iVGA~e~--EvavmNsLTvNlh~Ll~sF-yKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~i 190 (465)
T KOG3846|consen 114 EPILPLLAPIVGAQEN--EVAVMNSLTVNLHSLLISF-YKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQI 190 (465)
T ss_pred hhhhhhhhhhccCCch--hhhhHhhhhhHHHHHHHHh-cCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEe
Confidence 3345567889999754 7998899999999888776 222 1223210 0011 1123333343454422 23
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc--ccccccHHHHHHH-HhCCcEEEecccccCcCCccCCCCCCCC
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI--NGTRYSMHWISEA-HRNSWHVLLDATALVVGEDRLNLALHRP 305 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS--NG~i~Pl~~Ia~a-r~~g~~vlvDAaQa~~G~~~LDLs~l~~ 305 (344)
........+..+++...+..+. ....+|+++.+. +|..+++..|..+ +..|++|=.|-||++ |..|+-|.+|++
T Consensus 191 ePREGEetlRteDILd~IEkng--DeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAv-gNVpL~LHdWgV 267 (465)
T KOG3846|consen 191 EPREGEETLRTEDILDTIEKNG--DEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAV-GNVPLQLHDWGV 267 (465)
T ss_pred cccccccchhHHHHHHHHHhcC--CeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhh-cCCceEEeecCC
Confidence 2222123466777777776432 347899999887 5999999988887 668999999999999 999999999999
Q ss_pred cEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 306 DFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
||.|.+.||.|..||.|+|.|+|..+....
T Consensus 268 DFACWCSYKYlnaGaGgIgGlFvHekh~~~ 297 (465)
T KOG3846|consen 268 DFACWCSYKYLNAGAGGIGGLFVHEKHTKE 297 (465)
T ss_pred ceEEEeeecccccCCCccceeeeehhhhcc
Confidence 999999999877789999999997765443
No 239
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=98.47 E-value=2.2e-06 Score=83.87 Aligned_cols=161 Identities=14% Similarity=0.108 Sum_probs=104.0
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCCCCc-
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAWLDLR- 236 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~- 236 (344)
.+.|+.||++++++++ +|++|+|+++++.+++..+. +|+.++. .-.+ ......++..|++++.+|.+..++.
T Consensus 60 ~~Lr~aia~~~~v~~~--~I~it~G~~~~i~~~~~~l~--~g~~vlv~~P~y--~~~~~~~~~~g~~~~~v~~~~~~~~~ 133 (360)
T PRK07392 60 RELRLALAQHHQLPPE--WILPGNGAAELLTWAGRELA--QLRAVYLITPAF--GDYRRALRAFGATVKELPLPLDQPSP 133 (360)
T ss_pred HHHHHHHHHHhCcChh--hEEECCCHHHHHHHHHHHhC--CCCeEEEECCCc--HHHHHHHHHcCCeEEEEecccccCCc
Confidence 4789999999999886 79999999999999988763 5676542 2222 2234455667999999998643321
Q ss_pred ---cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCc---CCcc--CC-CCCCC
Q 035915 237 ---IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVV---GEDR--LN-LALHR 304 (344)
Q Consensus 237 ---i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~---G~~~--LD-Ls~l~ 304 (344)
.+.+++.+... +++++.++.-+| |..++-+++.+ ++++++ +++|-+..-. +..+ +. +...+
T Consensus 134 ~~~~~~~~~~~~~~------~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~ 206 (360)
T PRK07392 134 GLTLRLQTLPPQLT------PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYP 206 (360)
T ss_pred ccccCHHHHHHhcc------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCC
Confidence 23444443221 356776664455 99999977755 577775 6669875420 1100 11 11111
Q ss_pred CcEEEEccccCCCCCCC-ceEEEEEeCCCc
Q 035915 305 PDFVLCNLDNTQNAQPS-KITCLLIRKKSF 333 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~ 333 (344)
-=+++.|+=|. ||.|. .+|+++..++..
T Consensus 207 ~vi~i~S~SK~-~~l~GlRiG~~v~~~~~~ 235 (360)
T PRK07392 207 NLIILRSLTKF-YSLPGLRLGYAIAHPDRL 235 (360)
T ss_pred CEEEEEechhh-hcCCchheeeeeCCHHHH
Confidence 12777899999 88663 489888766544
No 240
>PRK08636 aspartate aminotransferase; Provisional
Probab=98.45 E-value=6.4e-06 Score=81.97 Aligned_cols=169 Identities=10% Similarity=0.079 Sum_probs=104.8
Q ss_pred HHHHHHHHHHc----CC--CCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 159 IQARNKVLKHC----GL--PDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 159 e~AR~~IA~~L----ga--~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
...|+.||+++ |. ++++ +|++|+|+++|+.+++..+ ..+||.|+. .-.+.. ....++..|++++.+|.+
T Consensus 74 ~~lR~~ia~~l~~~~~~~~~~~~-~I~it~G~~~al~~~~~~l-~~~gd~Vlv~~P~y~~--~~~~~~~~g~~~~~v~~~ 149 (403)
T PRK08636 74 YKLRLAICNWYKRKYNVDLDPET-EVVATMGSKEGYVHLVQAI-TNPGDVAIVPDPAYPI--HSQAFILAGGNVHKMPLE 149 (403)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCC-eEEECCChHHHHHHHHHHh-CCCCCEEEEcCCCCcc--hHHHHHhcCCEEEEEecc
Confidence 34677777766 64 4431 5999999999999999987 468998653 333331 233345579999998874
Q ss_pred CC-CCccCHHH----HHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc---CCcc
Q 035915 232 WL-DLRIKGSQ----LSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV---GEDR 297 (344)
Q Consensus 232 ~~-~g~i~~~~----L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~---G~~~ 297 (344)
.. +..++.+. ++++++.. ..+++++.++.-+| |..++.+.+. .|++++++++.|-+-.-. +...
T Consensus 150 ~~~~~~~d~~~l~~~l~~~~~~~--~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~ 227 (403)
T PRK08636 150 YNEDFELDEDQFFENLEKALRES--SPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKT 227 (403)
T ss_pred ccccCccChhhhhhHHHHHHhhc--cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCC
Confidence 22 23466654 44444321 12466666664245 9999996443 358899999999875520 1111
Q ss_pred CCCCCC----CCcEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 298 LNLALH----RPDFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 298 LDLs~l----~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
..+..+ +.-+++.|+=|. ||.|. .+|+++..+++.+
T Consensus 228 ~~~~~~~~~~~~~i~~~S~SK~-~~~~GlRiG~iv~~~~li~ 268 (403)
T PRK08636 228 PSILEVEGAKDVAVESYTLSKS-YNMAGWRVGFVVGNKKLVG 268 (403)
T ss_pred CChhcCCCccccEEEEEecccc-cCCccceeeeeeCCHHHHH
Confidence 122222 123457899999 87673 4888877665443
No 241
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=98.45 E-value=4.9e-06 Score=82.18 Aligned_cols=163 Identities=12% Similarity=0.009 Sum_probs=102.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC--------C-CCCCeEE-EcCCcCHHHHHHHHHcCCc-
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP--------F-FRGNFYM-TIIGEELDYVREFASFKES- 223 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~--------~-~~Gd~iv-S~~eH~~~~ir~la~~~G~- 223 (344)
...++.+++.++++++. + .++|++++|+|+..++.... + ..++.++ ..-.+|-..+..++...+.
T Consensus 72 ~~~~~~~~~~l~~~~~~--~--~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~ 147 (400)
T PTZ00125 72 NDVLGLAEKYITDLFGY--D--KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPK 147 (400)
T ss_pred CHHHHHHHHHHHhCCCC--C--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcc
Confidence 44778999999999875 2 59999999998776655321 1 1234444 4444551111111111110
Q ss_pred ----------EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc----HHHHHH-HHhCCcEEEe
Q 035915 224 ----------KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS----MHWISE-AHRNSWHVLL 286 (344)
Q Consensus 224 ----------kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P----l~~Ia~-ar~~g~~vlv 286 (344)
.+..++. .+.++|++.+.. .++++|.+..+.| |.+.| ++.|.+ |+++|+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~------~d~~~le~~l~~----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~ 217 (400)
T PTZ00125 148 CYNNFGPFVPGFELVDY------NDVEALEKLLQD----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIV 217 (400)
T ss_pred hhccCCCCCCCceEeCC------CCHHHHHHHhCC----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 1111221 257888888852 2477777754443 99998 766654 6899999999
Q ss_pred ccccc-CcCCc----cCCCCCCCCcEEEEccccCCCCCCC-ceEEEEEeCCCccc
Q 035915 287 DATAL-VVGED----RLNLALHRPDFVLCNLDNTQNAQPS-KITCLLIRKKSFDT 335 (344)
Q Consensus 287 DAaQa-~~G~~----~LDLs~l~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~~ 335 (344)
|-+|. + |.. ..+.....+|++++| |+ ++++- .+|++++++++.+.
T Consensus 218 Dev~~g~-g~~G~~~~~~~~~~~pd~~~~s--K~-l~~g~~~ig~v~~~~~~~~~ 268 (400)
T PTZ00125 218 DEIQTGL-GRTGKLLAHDHEGVKPDIVLLG--KA-LSGGLYPISAVLANDDVMLV 268 (400)
T ss_pred eccccCC-CccchhhHHHhcCCCCCEEEEc--cc-ccCCCcCcEEEEEcHHHHhh
Confidence 99986 4 532 233345678999988 99 66543 68999998876544
No 242
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=98.44 E-value=8.1e-06 Score=80.90 Aligned_cols=161 Identities=11% Similarity=0.018 Sum_probs=101.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC--------CCCC-CeE-EEcCCcC--HHHHHHHHH---
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP--------FFRG-NFY-MTIIGEE--LDYVREFAS--- 219 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~--------~~~G-d~i-vS~~eH~--~~~ir~la~--- 219 (344)
.....+.-+++++++|. + .++|++++|+|+..++.... ..+| +.+ +....+| ...+..+..
T Consensus 82 ~~~~~~l~~~l~~~~~~--~--~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~ 157 (401)
T PRK00854 82 NDQLAPLYEELAALTGS--H--KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPD 157 (401)
T ss_pred CHHHHHHHHHHHhhCCC--C--EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcc
Confidence 34566777788888875 2 59999999999887665431 1233 344 4444444 211111100
Q ss_pred ------cCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc----HHHHHH-HHhCCcEEEe
Q 035915 220 ------FKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS----MHWISE-AHRNSWHVLL 286 (344)
Q Consensus 220 ------~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P----l~~Ia~-ar~~g~~vlv 286 (344)
.....+..+|. .+.++|++.+.+ ++++|.+....| |.+.| ++.|.+ |+++|+++++
T Consensus 158 ~~~~~~~~~~~~~~~~~------~d~~~le~~i~~-----~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~ 226 (401)
T PRK00854 158 ARGGFGPFTPGFRVVPF------GDAEALEAAITP-----NTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLIL 226 (401)
T ss_pred ccccCCCCCCCeEEeCC------CCHHHHHHHhCC-----CeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 00122333332 256788888864 467777776654 99998 776654 6899999999
Q ss_pred ccccc-CcCCccC----CCCCCCCcEEEEccccCCCCCC-CceEEEEEeCCCcc
Q 035915 287 DATAL-VVGEDRL----NLALHRPDFVLCNLDNTQNAQP-SKITCLLIRKKSFD 334 (344)
Q Consensus 287 DAaQa-~~G~~~L----DLs~l~~DFvv~S~HK~l~G~P-~GiG~L~Vr~~~~~ 334 (344)
|.+|+ + |.... +.....+|+++++ |+ +++- --+|+++.+++..+
T Consensus 227 DEv~~g~-g~~g~~~~~~~~g~~~D~~~~~--K~-l~gg~~~ig~v~~~~~~~~ 276 (401)
T PRK00854 227 DEIQTGL-GRTGKLLAEEHEGIEADVTLIG--KA-LSGGFYPVSAVLSNSEVLG 276 (401)
T ss_pred echhhCC-CCCchHhHHhhcCCCCCEEEec--cc-ccCCccCeEEEEEcHHHHh
Confidence 99998 6 76542 2223568999997 98 5532 12788888876554
No 243
>PRK15029 arginine decarboxylase; Provisional
Probab=98.44 E-value=6.1e-06 Score=89.31 Aligned_cols=168 Identities=8% Similarity=-0.019 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCC--
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWL-- 233 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~-- 233 (344)
..+.+|.+..|+++|++. ....|.|+|.|+..++.+. .++||.|+..-.-|...+..+ .-.|++.++++..+.
T Consensus 205 G~I~eAq~~aA~~fgA~~---t~FlvNGST~gn~a~i~a~-~~~gd~Vlv~RN~HKSv~~al-~L~ga~Pvyl~P~~~~~ 279 (755)
T PRK15029 205 GAFGESEKYAARVFGADR---SWSVVVGTSGSNRTIMQAC-MTDNDVVVVDRNCHKSIEQGL-ILTGAKPVYMVPSRNRY 279 (755)
T ss_pred cHHHHHHHHHHHHhCCCc---EEEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHHH-HHcCCeEEEeccccccc
Confidence 367899999999999963 4677789999988887765 478998765443231112222 235888888754331
Q ss_pred --CCccC-----HHHHHHHhhhcC--C---CCCeeEEEEeCccc-cccccHHHHHH-HHhCCcEEEecccccCcCCcc--
Q 035915 234 --DLRIK-----GSQLSQYFRRKC--K---HTPKGLFSYPADIN-GTRYSMHWISE-AHRNSWHVLLDATALVVGEDR-- 297 (344)
Q Consensus 234 --~g~i~-----~~~L~~~l~~~~--~---~~~t~LVa~~avSN-G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~-- 297 (344)
-+.++ .+++++.+.... + ..+.+.+.++.-+- |+.++++.|.+ +|++|+.++||-||.+ |..
T Consensus 280 Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY~Gv~~di~~I~~~~h~~~~~llvDEAhGa--h~~F~ 357 (755)
T PRK15029 280 GIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQDLLEKTSDRLHFDEAWYG--YARFN 357 (755)
T ss_pred CCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCCcceeeCHHHHHHHHHhcCCeEEEECcccc--ccccC
Confidence 12344 788888885421 0 11223666664332 99999987765 6999999999999874 211
Q ss_pred --CC----C-----CCCCCc-EEEEccccCCCCCCCceEEEEEeCC
Q 035915 298 --LN----L-----ALHRPD-FVLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 298 --LD----L-----s~l~~D-Fvv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
+. + ...++| +++-|.||+ +++-+....|-++.+
T Consensus 358 ~~~p~~sa~~~~~~~~~Gad~~vvqStHKt-L~alTQaS~LHv~~~ 402 (755)
T PRK15029 358 PIYADHYAMRGEPGDHNGPTVFATHSTHKL-LNALSQASYIHVREG 402 (755)
T ss_pred ccccccccccccccccCCCceEEEEchhhc-ccchhhhhhheeCCC
Confidence 11 1 115788 999999999 777878888888655
No 244
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=98.43 E-value=3.4e-06 Score=81.83 Aligned_cols=159 Identities=11% Similarity=0.051 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCcc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLDLRI 237 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i 237 (344)
..+.|+++|+++|.+++ .|+.|+|+++++.+++. + +.+|+.++..-. .......++..|++++.+|.+.. ..
T Consensus 42 ~~~lr~~ia~~~~~~~~--~I~it~Gs~~~l~~~~~-~-~~~~~vv~~~P~--y~~y~~~~~~~G~~v~~vp~~~~--~~ 113 (332)
T PRK06425 42 YTDIEDQIKIYTQGLKI--KVLIGPGLTHFIYRLLS-Y-INVGNIIIVEPN--FNEYKGYAFTHGIRISALPFNLI--NN 113 (332)
T ss_pred HHHHHHHHHHHhCCCcc--eEEECCCHHHHHHHHHH-H-hCCCcEEEeCCC--hHHHHHHHHHcCCeEEEEeCCcc--cC
Confidence 46789999999999876 69999999999999886 3 356655443222 22344556778999999998642 23
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc-CCc--c-CCC-CCCCCc
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV-GED--R-LNL-ALHRPD 306 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~-G~~--~-LDL-s~l~~D 306 (344)
+.+.+++ .+++++.++.-+| |..++.+.+. .++++++++++|-+=.-. ... + ..+ ...+--
T Consensus 114 ~~~~l~~--------~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~v 185 (332)
T PRK06425 114 NPEILNN--------YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNV 185 (332)
T ss_pred cHHHHhh--------cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCE
Confidence 4443321 1356666654445 9999986543 347789999999874310 111 0 111 111223
Q ss_pred EEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 307 FVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 307 Fvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.++.|+=|. ||.| | +|.++..+++.+
T Consensus 186 i~~~SfSK~-~~l~-GlRiGy~v~~~~li~ 213 (332)
T PRK06425 186 IIGRSLTKI-LGIP-SLRIGYIATDDYNMK 213 (332)
T ss_pred EEEeecHHh-cCCc-hhhheeeecCHHHHH
Confidence 677899999 8867 6 799988766544
No 245
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.42 E-value=1.2e-07 Score=94.37 Aligned_cols=162 Identities=13% Similarity=0.136 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHH---H--HHHHHHcCCcEEEEEeCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELD---Y--VREFASFKESKVILAPEA 231 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~---~--ir~la~~~G~kV~~vp~~ 231 (344)
+.....+.++.+.||.. .+.+.|...|+.+++.++. .|.+++..-+|-+. . +-+.-+..|++++.+-..
T Consensus 48 R~~~v~~ll~~ltgAea----A~VvNnnaAAv~L~l~~la--~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt 121 (367)
T PF03841_consen 48 RYAHVEELLCELTGAEA----ALVVNNNAAAVLLALNTLA--KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT 121 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccc----ccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccc
Confidence 34566777889999852 4666777788888887763 56665544444321 1 223334568887776543
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc----ccc--ccHHHH-HHHHhCCcEEEecccccCc--------CCc
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN----GTR--YSMHWI-SEAHRNSWHVLLDATALVV--------GED 296 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN----G~i--~Pl~~I-a~ar~~g~~vlvDAaQa~~--------G~~ 296 (344)
. +...+++++++++ +|.++-.-|.|| |.. .+++++ ..+|++++++++|+..... +.
T Consensus 122 N---~t~~~Dye~AI~e-----~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~- 192 (367)
T PF03841_consen 122 N---RTHLSDYEKAITE-----NTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPD- 192 (367)
T ss_dssp -----------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT-----
T ss_pred c---ccccccccccccc-----cccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCcc-
Confidence 2 3456778888876 477777777777 433 456555 5579999999999988210 11
Q ss_pred cCCCC---CCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 297 RLNLA---LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 297 ~LDLs---~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
.-++. +.++|.++||+.|. +|||. .|+++-|+++.+.
T Consensus 193 Ep~v~~~~~~GaDlV~fSGdKl-LGGPQ-aGiI~Gkk~lI~~ 232 (367)
T PF03841_consen 193 EPTVQEYLAAGADLVTFSGDKL-LGGPQ-AGIIVGKKELIEK 232 (367)
T ss_dssp ------CCCCT-SEEEEETTSS-SSS-S--EEEEEEHHHHHH
T ss_pred ccHHHHHhhcCCCEEEEECCCc-CCCCC-eEEEEeCHHHHHH
Confidence 12333 36899999999999 99997 7999999987764
No 246
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=98.41 E-value=8e-06 Score=83.64 Aligned_cols=168 Identities=9% Similarity=0.050 Sum_probs=108.0
Q ss_pred HHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEe
Q 035915 159 IQARNKVLKHCG--------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 159 e~AR~~IA~~Lg--------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp 229 (344)
.+.|+.||++++ ++++ +|+.|+|+++++.+++.++ ..+||.|+.. -.+.. ....+....|++++.+|
T Consensus 89 ~~LR~aiA~~l~~~~~~~~~v~~~--~Iiit~Ga~~al~~l~~~l-~~pGd~Vlv~~P~Y~~-~~~~~~~~~g~~~v~v~ 164 (468)
T PLN02450 89 PAFKNALAEFMSEIRGNKVTFDPN--KLVLTAGATSANETLMFCL-AEPGDAFLLPTPYYPG-FDRDLKWRTGVEIVPIH 164 (468)
T ss_pred HHHHHHHHHHHHHhhCCCCCcChH--HeEEccChHHHHHHHHHHh-CCCCCEEEECCCCCCc-hHHHHhhcCCcEEEEEe
Confidence 457888888875 4665 6999999999999999988 4689986532 22331 11222224699999998
Q ss_pred CCC-CCCccCHHHHHHHhhhc-CCCCCeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCc--CCcc--
Q 035915 230 EAW-LDLRIKGSQLSQYFRRK-CKHTPKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVV--GEDR-- 297 (344)
Q Consensus 230 ~~~-~~g~i~~~~L~~~l~~~-~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~--G~~~-- 297 (344)
.+. .+..++.++|++.+.+. ....+++++.++.-+| |..+|.+.+.+ |+++++++++|=+-+.. ...+
T Consensus 165 ~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~ 244 (468)
T PLN02450 165 CSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFV 244 (468)
T ss_pred cCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcc
Confidence 753 23456778888776531 0112456665554445 99999975543 47899999999876520 1111
Q ss_pred --CCCC---------CCCCcEEEEccccCCCCCCC-ceEEEEEeCC
Q 035915 298 --LNLA---------LHRPDFVLCNLDNTQNAQPS-KITCLLIRKK 331 (344)
Q Consensus 298 --LDLs---------~l~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~ 331 (344)
+.+. ...-=+++.|+=|. ||.|. .+|+++..++
T Consensus 245 s~l~~~~~~~~~~~~~~~~vi~l~S~SK~-~~l~GlRiG~li~~~~ 289 (468)
T PLN02450 245 SVMEVLKDRKLENTDVSNRVHIVYSLSKD-LGLPGFRVGAIYSNDE 289 (468)
T ss_pred cHHHHhhhcccccCCCCCcEEEEEecccc-CCCCCccEEEEEECCH
Confidence 1110 01112788999999 87563 4999988754
No 247
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=98.39 E-value=4.7e-06 Score=81.25 Aligned_cols=155 Identities=17% Similarity=0.163 Sum_probs=105.3
Q ss_pred HHHHHHHHHHHcC---CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcC-HHHHHHHHHcCCcEEEEEeCCCC
Q 035915 158 EIQARNKVLKHCG---LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEE-LDYVREFASFKESKVILAPEAWL 233 (344)
Q Consensus 158 le~AR~~IA~~Lg---a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~-~~~ir~la~~~G~kV~~vp~~~~ 233 (344)
..+.|+.|+++++ ++++ +|++|+|+++++.++...+ +.++.. .+ .......++..|++++.+|.+.
T Consensus 58 ~~~Lr~aia~~~~~~~~~~~--~i~it~Ga~~~i~~~~~~~-----d~v~v~--~P~y~~~~~~~~~~g~~~~~v~~~~- 127 (335)
T PRK14808 58 DEELIEKILSYLDTDFLSKN--NVSVGNGADEIIYVMMLMF-----DRSVFF--PPTYSCYRIFAKAVGAKFLEVPLTK- 127 (335)
T ss_pred hHHHHHHHHHHhCCCCCCcc--eEEEcCCHHHHHHHHHHHh-----CcEEEC--CCCHHHHHHHHHHcCCeEEEecCCC-
Confidence 4668999999998 7766 7999999999999999887 333321 23 2334556677899999999864
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHhCCcEEEecccccCc-CCccCC-CCCCCCcEEE
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHRNSWHVLLDATALVV-GEDRLN-LALHRPDFVL 309 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~g~~vlvDAaQa~~-G~~~LD-Ls~l~~DFvv 309 (344)
++.++... +. +++++.++.-+| |..++.+.+.++-++++++++|-+-.-. +...++ +....-=+++
T Consensus 128 ~~~~~~~~----~~------~~~~i~i~nP~NPTG~~~s~~~l~~l~~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~ 197 (335)
T PRK14808 128 DLRIPEVN----VG------EGDVVFIPNPNNPTGHVFEREEIERILKTGAFVALDEAYYEFHGESYVDLLKKYENLAVI 197 (335)
T ss_pred cCCCChhH----cc------CCCEEEEeCCCCCCCCCcCHHHHHHHHhcCCEEEEECchhhhcCCchHHHHHhCCCEEEE
Confidence 34443321 22 246777776666 9999998877655689999999875420 211112 1122224788
Q ss_pred EccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 310 CNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 310 ~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
.|+=|. ||.| | +|+++..+++.+
T Consensus 198 ~S~SK~-~~l~-GlRvG~~v~~~~~~~ 222 (335)
T PRK14808 198 RTFSKA-FSLA-AQRIGYVVSSEKFID 222 (335)
T ss_pred Eechhh-ccCc-ccceEEEEeCHHHHH
Confidence 999999 8856 5 799998765544
No 248
>PRK06855 aminotransferase; Validated
Probab=98.39 E-value=1.5e-05 Score=80.60 Aligned_cols=162 Identities=12% Similarity=0.072 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
..+.|+.|++++ | ++++ +|++|+|+++|+.+++. + ..+||.|+ ..-.++.. ........|++++.+|.
T Consensus 75 ~~~LReaia~~~~~~~g~~~~~~--~I~it~G~~~al~~~~~-l-~~~Gd~Vlv~~P~Y~~~-~~~~~~~~g~~~v~v~~ 149 (433)
T PRK06855 75 VLETREFLAELNNKRGGAQITPD--DIIFFNGLGDAIAKIYG-L-LRREARVIGPSPAYSTH-SSAEAAHAGYPPVTYRL 149 (433)
T ss_pred CHHHHHHHHHHHHhccCCCCCHh--HEEEcCcHHHHHHHHHH-h-cCCCCeEEEeCCCCchH-HHHHHHhcCCeEEEEec
Confidence 456778888876 3 4555 79999999999998874 4 56899864 33333321 11111234788888887
Q ss_pred CCCC-CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc---CCccCCC
Q 035915 231 AWLD-LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV---GEDRLNL 300 (344)
Q Consensus 231 ~~~~-g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~---G~~~LDL 300 (344)
+..+ ..++.++|++.++.. .+++++.++.-+| |..++.+.+. .|++++++++.|-+..-. +.....+
T Consensus 150 ~~~~~~~~d~~~l~~~~~~~---~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl 226 (433)
T PRK06855 150 DPENNWYPDLDDLENKVKYN---PSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPL 226 (433)
T ss_pred ccccCCCCCHHHHHHHHhcC---CCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCH
Confidence 5322 247889999888531 1345555554445 9999996554 247899999999986531 2111222
Q ss_pred CCC---CCcEEEEccccCCCCCCC-ceEEEEE
Q 035915 301 ALH---RPDFVLCNLDNTQNAQPS-KITCLLI 328 (344)
Q Consensus 301 s~l---~~DFvv~S~HK~l~G~P~-GiG~L~V 328 (344)
..+ ..-+++.|+=|. |+.|. .+|.+++
T Consensus 227 ~~~~~~~~~I~~~S~SK~-~~~pGlRiG~ii~ 257 (433)
T PRK06855 227 SEVIGDVPGIALKGISKE-LPWPGSRCGWIEV 257 (433)
T ss_pred HHHcCcCCeEEEecCccc-cCCCcceEEEEEE
Confidence 211 123888999999 87673 4898887
No 249
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=98.35 E-value=1e-05 Score=82.88 Aligned_cols=152 Identities=15% Similarity=0.118 Sum_probs=103.4
Q ss_pred CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhc
Q 035915 171 LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRK 249 (344)
Q Consensus 171 a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~ 249 (344)
|+++ +|++|+|+++||++++..+ ..+||.|+. .-.|+ .+....+..|++++.+|.|. +| ++.+.|++.+...
T Consensus 153 ~~~~--~IiiT~G~q~al~l~~~~l-~~pGd~v~vE~PtY~--~~~~~~~~~g~~~~~vp~d~-~G-~~~e~le~~~~~~ 225 (459)
T COG1167 153 CEPE--QIVITSGAQQALDLLLRLL-LDPGDTVLVEDPTYP--GALQALEALGARVIPVPVDE-DG-IDPEALEEALAQW 225 (459)
T ss_pred cCcC--eEEEeCCHHHHHHHHHHHh-CCCCCEEEEcCCCcH--HHHHHHHHcCCcEEecCCCC-CC-CCHHHHHHHHhhc
Confidence 4554 7999999999999999987 458998653 22322 24455566799999999985 34 7999999988642
Q ss_pred CCCCCeeEEEEeCccc--cccccHHH----HHHHHhCCcEEEecccccCc--C-CccCCCCCC---CCcEEEEccccCCC
Q 035915 250 CKHTPKGLFSYPADIN--GTRYSMHW----ISEAHRNSWHVLLDATALVV--G-EDRLNLALH---RPDFVLCNLDNTQN 317 (344)
Q Consensus 250 ~~~~~t~LVa~~avSN--G~i~Pl~~----Ia~ar~~g~~vlvDAaQa~~--G-~~~LDLs~l---~~DFvv~S~HK~l~ 317 (344)
...-+++.|...| |..++++. +..|++++++++=|-.-+-. . .-+.++..+ +==+++.|+=|. +
T Consensus 226 ---~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l 301 (459)
T COG1167 226 ---KPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-L 301 (459)
T ss_pred ---CCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-c
Confidence 1234555554446 99999952 23468899999988754431 1 111123322 334999999999 5
Q ss_pred CCCC-ceEEEEEeCCCcc
Q 035915 318 AQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 318 G~P~-GiG~L~Vr~~~~~ 334 (344)
. |. .+|.+++.+++.+
T Consensus 302 ~-PglRlG~vv~p~~~~~ 318 (459)
T COG1167 302 A-PGLRLGYVVAPPELIE 318 (459)
T ss_pred c-cccceeeeeCCHHHHH
Confidence 5 64 6888888766544
No 250
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=98.35 E-value=7.7e-06 Score=80.96 Aligned_cols=160 Identities=14% Similarity=0.037 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHhhCCCCCC-CeEE-EcCCcC--HHHHHHHHHc---------CCc
Q 035915 158 EIQARNKVLKHCGLP-DDEYLVLFTPNYRDAMMLVGESYPFFRG-NFYM-TIIGEE--LDYVREFASF---------KES 223 (344)
Q Consensus 158 le~AR~~IA~~Lga~-p~ey~VVFTsnaTeAlnlva~sl~~~~G-d~iv-S~~eH~--~~~ir~la~~---------~G~ 223 (344)
..+..+.++++++.+ ++ .|+||+|+++|+..++..... .| +.++ ..-.+| ......+... .+.
T Consensus 87 ~~~la~~l~~~~~~~~~~--~v~~~~sgsea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 163 (398)
T PRK03244 87 QIALAERLVELLGAPEGG--RVFFCNSGAEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPG 163 (398)
T ss_pred HHHHHHHHHHhCCCCCCC--EEEEeCchHHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCC
Confidence 356777888888854 23 799999999999988764322 34 3344 323444 1111111100 011
Q ss_pred EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc----HHHHHH-HHhCCcEEEecccccCcCCc
Q 035915 224 KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS----MHWISE-AHRNSWHVLLDATALVVGED 296 (344)
Q Consensus 224 kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P----l~~Ia~-ar~~g~~vlvDAaQa~~G~~ 296 (344)
.+..+|. .+.+.|++.+.+ ++++|.+....| |.+.| ++.|.+ |+++|+++++|-+|+-.|..
T Consensus 164 ~~~~~~~------~d~~~l~~~~~~-----~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~ 232 (398)
T PRK03244 164 GVEHVPY------GDVDALAAAVDD-----DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRT 232 (398)
T ss_pred CceEeCC------CCHHHHHHhhcC-----CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccc
Confidence 2223332 146778877743 356666554443 99988 666654 68999999999999521321
Q ss_pred ----cCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 297 ----RLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 297 ----~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
.+......+|++++| |+ +|+.-.+|+++++++..+
T Consensus 233 g~~~~~~~~~~~pDi~t~s--K~-l~~G~~ig~~~~~~~~~~ 271 (398)
T PRK03244 233 GAWFAHQHDGVTPDVVTLA--KG-LGGGLPIGACLAFGPAAD 271 (398)
T ss_pred chHHhhhhhCCCCCEEEEc--hh-hhCCcccEEEEEcHHHHh
Confidence 123345679988775 99 774345899999876544
No 251
>PRK07505 hypothetical protein; Provisional
Probab=98.33 E-value=3e-05 Score=77.17 Aligned_cols=157 Identities=10% Similarity=0.038 Sum_probs=90.7
Q ss_pred hhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC---CCCCCC--eEEEc-CCcCHHH-HHHHHHcCCcE
Q 035915 152 SFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY---PFFRGN--FYMTI-IGEELDY-VREFASFKESK 224 (344)
Q Consensus 152 ~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl---~~~~Gd--~ivS~-~eH~~~~-ir~la~~~G~k 224 (344)
.......++.++++++++|. + .++|++|+ +|+..++... -+.+|+ .++.. ..|.... ...+.+ .+.+
T Consensus 87 ~~~~~~~~~l~~~la~~~~~--~--~~~~~sG~-~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~ 160 (402)
T PRK07505 87 RVRSQILKDLEEALSELFGA--S--VLTFTSCS-AAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETE 160 (402)
T ss_pred hhhhHHHHHHHHHHHHHhCC--C--EEEECChH-HHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCe
Confidence 34566779999999999997 3 46677654 4544333211 122233 33333 3344221 122222 3567
Q ss_pred EEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEe-Ccc-ccccccHHHHHH-HHhCCcEEEecccccCcCCcc----
Q 035915 225 VILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYP-ADI-NGTRYSMHWISE-AHRNSWHVLLDATALVVGEDR---- 297 (344)
Q Consensus 225 V~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~-avS-NG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~---- 297 (344)
++.+|.. +.++|++.++++ ++++.+. -++ +|.+.|++.|.+ ++++|+++++|.+|+..+..+
T Consensus 161 v~~~~~~------d~~~l~~~~~~~-----~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~ 229 (402)
T PRK07505 161 VETIDHN------DLDALEDICKTN-----KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDAHGLSIYGKNGEG 229 (402)
T ss_pred EEEeCCC------CHHHHHHHHhcC-----CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECcccccCcCCCCCc
Confidence 7777753 467788877542 2334333 222 499999988865 688999999999996411111
Q ss_pred CC---CC--CCCCcEEEEccccCCCCCCCceEEEEE
Q 035915 298 LN---LA--LHRPDFVLCNLDNTQNAQPSKITCLLI 328 (344)
Q Consensus 298 LD---Ls--~l~~DFvv~S~HK~l~G~P~GiG~L~V 328 (344)
.. +. ..+..+++.|+=|. ||.+ | |++.+
T Consensus 230 ~~~~~~~~~~~d~~i~~~s~sK~-~~~~-G-g~~~~ 262 (402)
T PRK07505 230 YVRSELDYRLNERTIIAASLGKA-FGAS-G-GVIML 262 (402)
T ss_pred hHHHHcCCCCCCCeEEEEechhh-hhcc-C-eEEEe
Confidence 11 11 11234667789998 8844 4 66554
No 252
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.31 E-value=1.1e-05 Score=89.00 Aligned_cols=156 Identities=13% Similarity=0.042 Sum_probs=114.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCC--CCCeE-EEcCCcC--HHHHHHHHHcCCcEEEEEeCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFF--RGNFY-MTIIGEE--LDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~--~Gd~i-vS~~eH~--~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+-+-+..|+++.|.+.. +.-+-.++|++.+.++.++... ++++| ++...|+ ...++..++..|++|+.++.
T Consensus 110 ~l~e~Qt~i~eLtGm~~a--NaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~- 186 (939)
T TIGR00461 110 ALLNFQTVVSDLTGLPVA--NASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC- 186 (939)
T ss_pred HHHHHHHHHHHHHCCChh--hhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH-
Confidence 567889999999999755 5678889999887766665432 33554 6777788 34566667778999988743
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-c--cccccHHHHH-HHHhCCcEEEecccccCcCCccCCCCCCCCcE
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-N--GTRYSMHWIS-EAHRNSWHVLLDATALVVGEDRLNLALHRPDF 307 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-N--G~i~Pl~~Ia-~ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DF 307 (344)
++|++.+ ++ +++..++ | |.+-+++.|. .+|++|+++++++-+.. .....+-.++++|+
T Consensus 187 --------~~l~~~~-------~~--~~v~~q~Pn~~G~ied~~~i~~~~h~~gal~~~~ad~~a-l~ll~~Pge~GaDi 248 (939)
T TIGR00461 187 --------SDIKKAV-------DV--FGCLLQYPATDGSILDYKQLIDALHSHKSLVSVAADLMA-LTLLTPPGHYGADI 248 (939)
T ss_pred --------HHHhhcC-------CE--EEEEEECCCCCeEEecHHHHHHHHHHcCCEEEEEechHH-hCCcCCHHHcCCcE
Confidence 2343332 13 3333333 4 9999997774 57999999999888888 66777778899999
Q ss_pred EEEccccC----CCCCCCceEEEEEeCCCcc
Q 035915 308 VLCNLDNT----QNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~----l~G~P~GiG~L~Vr~~~~~ 334 (344)
++.++++| -|||| +.|++.+|++...
T Consensus 249 ~vg~~q~fg~p~g~GGP-~aG~~a~~~~l~r 278 (939)
T TIGR00461 249 VLGSSQRFGVPMGYGGP-HAAFFAVKDEYNR 278 (939)
T ss_pred EeeCCCccCCCCCCCCC-ceeeeeecHhhHh
Confidence 99988887 26778 7999999986543
No 253
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.31 E-value=2.1e-06 Score=83.47 Aligned_cols=167 Identities=15% Similarity=0.161 Sum_probs=110.3
Q ss_pred HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHH--HHHHcCCcEEEEEeCCCCCCccC
Q 035915 161 ARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVR--EFASFKESKVILAPEAWLDLRIK 238 (344)
Q Consensus 161 AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir--~la~~~G~kV~~vp~~~~~g~i~ 238 (344)
..+++|+++|-.. -.|++++|-++.+.+..---++|.+++.....|...|. .++.-.|+.++.+.... |+.++
T Consensus 61 LE~~vA~l~GKEA----gLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~-dgtm~ 135 (384)
T KOG1368|consen 61 LEQRVAELFGKEA----GLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEN-DGTMD 135 (384)
T ss_pred HHHHHHHHhCccc----eeeecccccccHHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeCC-CCeee
Confidence 4456899999753 48999999997766554323578886543332211111 11222477777765443 68899
Q ss_pred HHHHHHHhhhc---CCCCCeeEEEEeCcc-c--cccccHHHHHH----HHhCCcEEEecccccCcCC--ccCCCCC--CC
Q 035915 239 GSQLSQYFRRK---CKHTPKGLFSYPADI-N--GTRYSMHWISE----AHRNSWHVLLDATALVVGE--DRLNLAL--HR 304 (344)
Q Consensus 239 ~~~L~~~l~~~---~~~~~t~LVa~~avS-N--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~G~--~~LDLs~--l~ 304 (344)
.++|++.++.+ +..+.|+|+++--.. | |..+|++|+.+ ++++|+.+|+|+|-.+-.. ..+.+++ -.
T Consensus 136 ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~ 215 (384)
T KOG1368|consen 136 LEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSA 215 (384)
T ss_pred HHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHh
Confidence 99999999842 334679999997433 3 69999998864 4789999999998654111 1233333 24
Q ss_pred CcEEEEccccCCCCCCCceEEEEE-eCCCccc
Q 035915 305 PDFVLCNLDNTQNAQPSKITCLLI-RKKSFDT 335 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~GiG~L~V-r~~~~~~ 335 (344)
+|-+.+++-|- +|+| +|-.+| .+++.+.
T Consensus 216 fDSVsiCLSKg-lgAP--VGSViVG~k~FI~k 244 (384)
T KOG1368|consen 216 FDSVSICLSKG-LGAP--VGSVIVGSKDFIDK 244 (384)
T ss_pred hhhhhhhhhcc-CCCC--cccEEEccHHHHHH
Confidence 89999999999 9999 554555 4454444
No 254
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=98.30 E-value=3.7e-05 Score=77.62 Aligned_cols=183 Identities=10% Similarity=0.045 Sum_probs=119.5
Q ss_pred cccchHHHHHHhhccCCCCh-hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCc
Q 035915 131 RTQLEPSRLLDILTKKSSFP-GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGE 209 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gnss~~-g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH 209 (344)
.++++.+.+...-.+-+.+. =.-......+.-+++|+|+|.+. -++|+||-+.-+- ++.++. +++|.++++--.
T Consensus 58 ~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~---al~f~SGy~AN~~-~i~~l~-~~~dli~~D~ln 132 (388)
T COG0156 58 LIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA---ALLFSSGFVANLG-LLSALL-KKGDLIFSDELN 132 (388)
T ss_pred HHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc---EEEEcccchhHHH-HHHHhc-CCCcEEEEechh
Confidence 56667777776533332110 01122355778889999999963 5999999875443 445553 468888887655
Q ss_pred CHHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCC-CeeEEEEeCc-cc-cccccHHHHHH-HHhCCcEEE
Q 035915 210 ELDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHT-PKGLFSYPAD-IN-GTRYSMHWISE-AHRNSWHVL 285 (344)
Q Consensus 210 ~~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~-~t~LVa~~av-SN-G~i~Pl~~Ia~-ar~~g~~vl 285 (344)
|.. +..-++-.+++++...-+ |.+.|++.+.+..... +.++|++..+ |. |.+-||..|.. +++++++++
T Consensus 133 HAS-iidG~rls~a~~~~f~Hn------D~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~ 205 (388)
T COG0156 133 HAS-IIDGIRLSRAEVRRFKHN------DLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLY 205 (388)
T ss_pred hhh-HHHHHHhCCCcEEEecCC------CHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEE
Confidence 522 222233456777766532 4578888886521111 3567777665 44 99999977755 588999999
Q ss_pred ecccccCcCCccCC---------CCCCCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 286 LDATALVVGEDRLN---------LALHRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 286 vDAaQa~~G~~~LD---------Ls~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
||=||++ |..-=+ +..-.+|+++.++-|- || +.|+.+.-.
T Consensus 206 VDEAHa~-Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKA-lG---s~Gg~v~g~ 254 (388)
T COG0156 206 VDEAHAV-GVLGPNGRGLAEHFGLEPEEVDIIVGTLGKA-LG---SSGGYIAGS 254 (388)
T ss_pred EEccccc-cccCCCCccHHHHhCCCCccceEEEEEchhh-hc---ccCceeeCc
Confidence 9999999 865422 2234569999999999 88 677766543
No 255
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=98.29 E-value=1.5e-05 Score=79.40 Aligned_cols=160 Identities=9% Similarity=0.009 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHc---CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCc----------
Q 035915 158 EIQARNKVLKHC---GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKES---------- 223 (344)
Q Consensus 158 le~AR~~IA~~L---ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~---------- 223 (344)
....|+.||+++ +++++ +|++|+|+++++.++.. + +.+|+.|+ ..-.+. .....++..|+
T Consensus 77 ~~~lr~aia~~~~~~~~~~d--~I~it~Ga~~al~~l~~-l-~~~gd~Vlv~~P~y~--~~~~~~~~~g~~~~~~~~~~~ 150 (402)
T TIGR03542 77 YPFLREAIAENDYRGRIDPE--EIFISDGAKCDVFRLQS-L-FGSDNTVAVQDPVYP--AYVDSNVMAGRAGVLDDDGRY 150 (402)
T ss_pred CHHHHHHHHHHHHhcCCCHH--HEEECCCcHHHHHHHHH-h-cCCCCEEEEeCCCCc--chHHHHHHcCCcccccccccc
Confidence 456888888876 67776 79999999999998754 3 35788754 223333 12334455677
Q ss_pred -EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHH---H-HHHHhCCcEEEecccccCc---
Q 035915 224 -KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHW---I-SEAHRNSWHVLLDATALVV--- 293 (344)
Q Consensus 224 -kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~---I-a~ar~~g~~vlvDAaQa~~--- 293 (344)
+++.+|.+..++ ...+ +.+ . .++++|.++.-+| |+.++.+. | ..|+++++++++|-+..-.
T Consensus 151 ~~~~~v~~~~~~~-~~~~-~~~---~----~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~ 221 (402)
T TIGR03542 151 SKITYLPCTKENN-FIPD-LPE---E----PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISD 221 (402)
T ss_pred ceEEEeecchhhC-CCCC-ccc---c----CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccC
Confidence 888888753211 2221 111 0 1356777664445 99999643 3 2357899999999987631
Q ss_pred CCccCCCCCCC----CcEEEEccccCCCCCCC-ceEEEEEeCCCc
Q 035915 294 GEDRLNLALHR----PDFVLCNLDNTQNAQPS-KITCLLIRKKSF 333 (344)
Q Consensus 294 G~~~LDLs~l~----~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~ 333 (344)
+..+..+..+. .-+++.|+=|. ||.|. .+|++++.++..
T Consensus 222 ~~~~~~~~~~~~~~~~vi~~~SfSK~-~g~pGlRiG~~i~~~~l~ 265 (402)
T TIGR03542 222 PSLPHSIFEIPGAKECAIEFRSFSKT-AGFTGVRLGWTVVPKELT 265 (402)
T ss_pred CCCCcchhhCCCCcccEEEEecCccc-cCCCCcceEEEEecHHHh
Confidence 11122222221 23667899999 88662 489998876543
No 256
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=98.24 E-value=2.3e-05 Score=76.47 Aligned_cols=167 Identities=10% Similarity=0.034 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC-C-C----CCCeEEE-cCCcC--HHHHHHHHHcCCcEE
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP-F-F----RGNFYMT-IIGEE--LDYVREFASFKESKV 225 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~-~-~----~Gd~ivS-~~eH~--~~~ir~la~~~G~kV 225 (344)
.....+..+++++++|.+ .++|+.|+++|+.+++.... + . +|+.+++ .-.+| ...............
T Consensus 68 ~~~~~~l~~~la~~~g~~----~~~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~ 143 (379)
T TIGR00707 68 TEPQEELAEKLVEHSGAD----RVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQK 143 (379)
T ss_pred CHHHHHHHHHHHhhCCCC----EEEEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhc
Confidence 345678899999999873 59999999999887766431 1 1 2577653 32333 111111100000000
Q ss_pred EEEeCCCCCCcc----CHHHHHHHhhhcCCCCCeeEEEEeCccc--ccc-cc---HHHHH-HHHhCCcEEEeccccc-Cc
Q 035915 226 ILAPEAWLDLRI----KGSQLSQYFRRKCKHTPKGLFSYPADIN--GTR-YS---MHWIS-EAHRNSWHVLLDATAL-VV 293 (344)
Q Consensus 226 ~~vp~~~~~g~i----~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i-~P---l~~Ia-~ar~~g~~vlvDAaQa-~~ 293 (344)
...+... +-.. +.+.|++.+.+ ++++|.+...+| |.. .+ ++.|. .++++|+++++|.++. +
T Consensus 144 ~~~~~~~-~~~~~~~~d~~~l~~~~~~-----~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~- 216 (379)
T TIGR00707 144 GFEPLVP-GFSYAPYNDIESLKKAIDD-----ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGI- 216 (379)
T ss_pred cCCCCCC-CceeeCCCCHHHHHHHhhh-----CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC-
Confidence 0111110 0011 57788887764 366777765554 554 34 44443 3588999999999997 4
Q ss_pred CCc----cCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 294 GED----RLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 294 G~~----~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
|.. +++.....+|++++ .|. +++.-.+|+++.+++..+.
T Consensus 217 ~~~g~~~~~~~~~~~~d~~t~--sK~-~~~G~riG~~~~~~~~~~~ 259 (379)
T TIGR00707 217 GRTGKFFAYEHYGIEPDIITL--AKG-LGGGVPIGATLAKEEVAEA 259 (379)
T ss_pred CccchhhhHHhcCCCCCEEEE--ccc-ccCCcccEEEEEcHHHHhh
Confidence 432 12233456787765 699 8733459999988765443
No 257
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=98.23 E-value=4.5e-05 Score=75.68 Aligned_cols=163 Identities=12% Similarity=-0.024 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHcC------CCCCCCeE--EEeCCHHHHHHHHHhhCC-CCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEE
Q 035915 158 EIQARNKVLKHCG------LPDDEYLV--LFTPNYRDAMMLVGESYP-FFRGNFYMT-IIGEELDYVREFASFKESKVIL 227 (344)
Q Consensus 158 le~AR~~IA~~Lg------a~p~ey~V--VFTsnaTeAlnlva~sl~-~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~ 227 (344)
..+.|+.|++++. ++++ +| +.|+|+++|+.+++..+. ..+||.++. .-.++ .....++..|++++.
T Consensus 71 ~~~lR~aia~~~~~~~~~~~~~~--~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~--~~~~~~~~~g~~~v~ 146 (396)
T PRK09257 71 LAAYRQAVQELLFGADSPALAAG--RVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWP--NHRAIFEAAGLEVKT 146 (396)
T ss_pred CHHHHHHHHHHhcCCCCcccccC--eEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcc--cHHHHHHHcCCcEEE
Confidence 4557777887752 2344 45 999999999999987664 368998642 22222 123344557999999
Q ss_pred EeC-CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcCCc----
Q 035915 228 APE-AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVGED---- 296 (344)
Q Consensus 228 vp~-~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~~---- 296 (344)
+|. +.++..++.+.+++.+... ..++.++.++.-+| |..++.+... .|++++++++.|-+=.-....
T Consensus 147 v~~~~~~~~~~d~~~l~~~~~~~--~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~ 224 (396)
T PRK09257 147 YPYYDAATKGLDFDAMLADLSQA--PAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEED 224 (396)
T ss_pred EeccccccCccCHHHHHHHHHhC--CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHH
Confidence 986 2223457889998887531 11355666665556 9999996543 357899999998763210100
Q ss_pred cCC---CCCCC-CcEEEEccccCCCCCCCc--eEEEEE
Q 035915 297 RLN---LALHR-PDFVLCNLDNTQNAQPSK--ITCLLI 328 (344)
Q Consensus 297 ~LD---Ls~l~-~DFvv~S~HK~l~G~P~G--iG~L~V 328 (344)
... +.... --+++.|+=|. |+ |.| +|++++
T Consensus 225 ~~~~~~~~~~~~~vi~i~SfSK~-~~-~~GlRiG~~~~ 260 (396)
T PRK09257 225 AYGLRAFAAAGLELLVASSFSKN-FG-LYGERVGALSV 260 (396)
T ss_pred HHHHHHHHhcCCcEEEEEEcCCc-Cc-cccccceeEEE
Confidence 000 11111 23788999999 88 544 788874
No 258
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=98.22 E-value=3.8e-05 Score=74.54 Aligned_cols=150 Identities=11% Similarity=0.007 Sum_probs=97.8
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCCCCcc
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAWLDLRI 237 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i 237 (344)
...|+.|++++|. + +|++|+|+++++.++.. ..+||.++. .-. .......++..|++++.+|.+
T Consensus 52 ~~Lr~~ia~~~~~--~--~I~it~Gs~~al~~~~~---~~~gd~v~v~~P~--y~~~~~~~~~~g~~~~~v~~~------ 116 (330)
T PRK05664 52 DGLEAAARAYYGA--P--QLLPVAGSQAAIQALPR---LRAPGRVGVLSPC--YAEHAHAWRRAGHQVRELDEA------ 116 (330)
T ss_pred HHHHHHHHHHhCC--C--CEEECcCHHHHHHHHHH---ccCCCEEEEcCCC--hHHHHHHHHHcCCeEEEechh------
Confidence 4569999999986 3 69999999999998864 357888653 222 223455566779999888763
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCcCCccCCCCCCC--C-cEE
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVVGEDRLNLALHR--P-DFV 308 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~G~~~LDLs~l~--~-DFv 308 (344)
++.+.+. +++++.+..-+| |.+++.+.+.+ ++++++++++|=+-.- ......+..+. . =++
T Consensus 117 ---~~~~~~~------~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~-~~~~~s~~~~~~~~~vi~ 186 (330)
T PRK05664 117 ---EVEAALD------SLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMD-NTPQHSLAACAHRPGLIV 186 (330)
T ss_pred ---hHhhhhc------CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCccc-CCCcccccccccCCCEEE
Confidence 2333342 234444332345 99999865543 4678999999987643 22111222221 1 288
Q ss_pred EEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 309 LCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 309 v~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
+.|+-|. ||.|. .+|.++..++..+
T Consensus 187 ~~SfSK~-~gl~GlRiG~~v~~~~l~~ 212 (330)
T PRK05664 187 LRSFGKF-FGLAGARLGFVLAEPALLR 212 (330)
T ss_pred Eeecccc-ccCCCcceEEEEeCHHHHH
Confidence 9999999 88672 3899988765544
No 259
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=98.21 E-value=8.5e-06 Score=81.64 Aligned_cols=168 Identities=14% Similarity=-0.015 Sum_probs=110.9
Q ss_pred ChhhhhhH-HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcC---HHHHHHHHHcCCc
Q 035915 149 FPGSFISI-PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEE---LDYVREFASFKES 223 (344)
Q Consensus 149 ~~g~~as~-~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~---~~~ir~la~~~G~ 223 (344)
|.|-+.-+ ..+-|.++..++||++-. + |=--+++.|+..|..++ +++||.++. .+.|. ....+.-...+=+
T Consensus 64 YgGce~VD~vE~laierak~LFga~~a--n-VQPhSGs~AN~av~~Al-l~pGDtimgm~l~~GGHltHg~~v~~sG~~~ 139 (413)
T COG0112 64 YGGCEYVDEVEELAIERAKKLFGAEYA--N-VQPHSGSQANQAVYLAL-LQPGDTIMGLDLSHGGHLTHGSPVNFSGKLF 139 (413)
T ss_pred cCCCeeHHHHHHHHHHHHHHHhCCCcc--c-cCCCCchHHHHHHHHHH-cCCCCeEecccCCCCCcccCCCCCCccceeE
Confidence 34444334 447889999999999632 2 22346677777777776 578999864 33332 1111110010114
Q ss_pred EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-cccccHHHHHH-HHhCCcEEEecccccCcCCcc----
Q 035915 224 KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTRYSMHWISE-AHRNSWHVLLDATALVVGEDR---- 297 (344)
Q Consensus 224 kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~---- 297 (344)
++..-+++.+++.||.+++++..... +++|+.+- .|. -...|++.+++ +.+.|+++++|+||.+ |.+-
T Consensus 140 ~~v~Y~vd~et~~IDyD~~~k~a~e~----kPK~ii~G-~SaY~r~id~~~~reIad~VGA~L~~DmAHia-GLVA~G~~ 213 (413)
T COG0112 140 NVVSYGVDPETGLIDYDEVEKLAKEV----KPKLIIAG-GSAYSRPIDFKRFREIADEVGAYLMVDMAHVA-GLIAGGVH 213 (413)
T ss_pred EeEecccccccCccCHHHHHHHHHHh----CCCEEEEC-ccccccccCHHHHHHHHHHhCceEEehHHHHH-HHHhcccC
Confidence 45556777667899999999887653 45676665 444 78889988876 5889999999999998 7642
Q ss_pred -CCCCCCCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 298 -LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 298 -LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
=.+. .+|+++.|-||. |.||+| |+++.++
T Consensus 214 p~P~~--~AdvVTtTTHKT-lrGPrG-G~Il~~~ 243 (413)
T COG0112 214 PNPLP--HADVVTTTTHKT-LRGPRG-GIILTND 243 (413)
T ss_pred CCCCC--ccceEeCCcccC-CCCCCc-eEEEecc
Confidence 1222 289999999999 666975 5555554
No 260
>PRK08354 putative aminotransferase; Provisional
Probab=98.21 E-value=5.9e-05 Score=72.51 Aligned_cols=145 Identities=14% Similarity=0.138 Sum_probs=94.7
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCCCCCcc
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPEAWLDLRI 237 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i 237 (344)
...|+.++++.|. +|++|+|+++++.+++..+ .+|+.++. .-.+. .....++..|++++.++ +
T Consensus 43 ~~l~~~ia~~~~~-----~I~vt~G~~~al~~~~~~~--~~gd~vlv~~P~y~--~~~~~~~~~g~~~~~~~-------~ 106 (311)
T PRK08354 43 EWLEEEFSKLFGE-----PIVITAGITEALYLIGILA--LRDRKVIIPRHTYG--EYERVARFFAARIIKGP-------N 106 (311)
T ss_pred HHHHHHHHHHHCC-----CEEECCCHHHHHHHHHHhh--CCCCeEEEeCCCcH--HHHHHHHHcCCEEeecC-------C
Confidence 4568899999983 5999999999999887544 37888653 22222 23445566788886654 3
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCcCCccCCCCCCCCcEEEEc
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCN 311 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S 311 (344)
+.+.|++.+++ ++++.+..-+| |..++.+.+.+ ++++|+++++|-+-.-.....-... ..--+++-|
T Consensus 107 d~~~l~~~~~~------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~-~~~vi~~~S 179 (311)
T PRK08354 107 DPEKLEELVER------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPE-GENIIKLRT 179 (311)
T ss_pred CHHHHHHhhcC------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccC-CCcEEEEec
Confidence 45677766642 23444433345 99999865543 4678999999998743010110111 223488899
Q ss_pred cccCCCCCCCc--eEEEEE
Q 035915 312 LDNTQNAQPSK--ITCLLI 328 (344)
Q Consensus 312 ~HK~l~G~P~G--iG~L~V 328 (344)
+=|. ||.| | +|.++.
T Consensus 180 ~SK~-~~l~-GlRiG~~v~ 196 (311)
T PRK08354 180 FTKS-YGLP-GIRVGYVKG 196 (311)
T ss_pred cHhh-cCCc-cceeeeeee
Confidence 9999 8867 5 788775
No 261
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.19 E-value=1.9e-05 Score=80.81 Aligned_cols=182 Identities=10% Similarity=0.012 Sum_probs=110.2
Q ss_pred HHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcC-----CcC--HH
Q 035915 140 LDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTII-----GEE--LD 212 (344)
Q Consensus 140 ~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~-----eH~--~~ 212 (344)
..++.|...|.+... +.+-.+.++++||-. .++||..++.+-+++...+.-.+|+++.... -|+ ..
T Consensus 61 aAM~~GDD~Y~gdpS---v~~Lee~vael~G~E----~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fe 133 (467)
T TIGR02617 61 AAMMRGDEAYSGSRS---YYALAESVKNIFGYQ----YTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFD 133 (467)
T ss_pred HHHHcCCcccccCch---HHHHHHHHHHHhCCc----eEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEe
Confidence 333446655555443 344566788999974 3899988898888877665433566654222 233 11
Q ss_pred HHHHHHHcCCcEEEEEeCC---------CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc---cccccHHHHHH----
Q 035915 213 YVREFASFKESKVILAPEA---------WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN---GTRYSMHWISE---- 276 (344)
Q Consensus 213 ~ir~la~~~G~kV~~vp~~---------~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN---G~i~Pl~~Ia~---- 276 (344)
..+..+.-.|+.+..++.+ ..+|.++.++|++++++.. ..+...+..+..+| |..+|++.+.+
T Consensus 134 tt~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g-~~~i~~v~~tlt~N~~GGqpvslenlr~V~~l 212 (467)
T TIGR02617 134 TTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVG-PNNVPYIVATITCNSAGGQPVSLANLKAVYEI 212 (467)
T ss_pred cchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcC-CCCceeeeeeEEEecCCCEEeCHHHHHHHHHH
Confidence 2233344468777665321 1258899999999997521 01122222222334 99999987754
Q ss_pred HHhCCcEEEecccccCc----------CCccCCCCC------CCCcEEEEccccCCCCCCCceEEEEEeCC
Q 035915 277 AHRNSWHVLLDATALVV----------GEDRLNLAL------HRPDFVLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 277 ar~~g~~vlvDAaQa~~----------G~~~LDLs~------l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
|+++|+.+|+|||=.+- +....++++ -.+|.+++|+=|- +|.|.| |+|..+++
T Consensus 213 a~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKg-lgApvG-g~Lag~d~ 281 (467)
T TIGR02617 213 AKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKD-AMVPMG-GLLCFKDD 281 (467)
T ss_pred HHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCC-CCCccc-ceEEecch
Confidence 47899999999964330 122233321 3699999999999 888943 24444544
No 262
>PLN02368 alanine transaminase
Probab=98.19 E-value=3.3e-05 Score=77.95 Aligned_cols=166 Identities=11% Similarity=-0.011 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
+.+.|+.||+++ | ++++ +|++|+|+++|+.+++..+-..+||.++ ..-.++. ....++..|.+++.+|.
T Consensus 109 ~~~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~--y~~~~~~~g~~~v~v~~ 184 (407)
T PLN02368 109 LPGVRKEVAEFIERRDGYPSDPE--LIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPL--YSATISLLGGTLVPYYL 184 (407)
T ss_pred CHHHHHHHHHHHHHhcCCCCChh--hEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCcc--HHHHHHHcCCEEEEEec
Confidence 345777777776 6 4555 7999999999999998877435899865 3333331 23334556889988887
Q ss_pred CCC-CCccCHHHHHHHhhhc-CCCCCeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCc---CCcc-C
Q 035915 231 AWL-DLRIKGSQLSQYFRRK-CKHTPKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVV---GEDR-L 298 (344)
Q Consensus 231 ~~~-~g~i~~~~L~~~l~~~-~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~---G~~~-L 298 (344)
+.. +..++.++|++.+++. .+..+++++.+..-+| |.+++.+.+.+ |++++++++.|-+-.-. +..+ .
T Consensus 185 ~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~ 264 (407)
T PLN02368 185 EESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFI 264 (407)
T ss_pred ccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcc
Confidence 642 2357889999888631 0111466555543455 99999976543 47899999999865431 1101 1
Q ss_pred CCC----CCC-------CcEEEEccccCCC-CCCC-ceEEEEE
Q 035915 299 NLA----LHR-------PDFVLCNLDNTQN-AQPS-KITCLLI 328 (344)
Q Consensus 299 DLs----~l~-------~DFvv~S~HK~l~-G~P~-GiG~L~V 328 (344)
.+. .+. -=+++.|+-|. | |.|. .+|.+++
T Consensus 265 s~~~~~~~~~~~~~~~~~vI~~~SfSK~-~~~~~GlRiGy~i~ 306 (407)
T PLN02368 265 SAKKVLMDMGPPISKEVQLVSFHTVSKG-YWGECGQRGGYFEM 306 (407)
T ss_pred cHHHHHhhhcccccccceEEEEecCCcc-cccCCccceEEEEE
Confidence 110 111 22667899998 7 5552 3788874
No 263
>PRK05839 hypothetical protein; Provisional
Probab=98.18 E-value=7.8e-05 Score=73.61 Aligned_cols=162 Identities=12% Similarity=0.062 Sum_probs=98.8
Q ss_pred HHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCC-CCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCC
Q 035915 160 QARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPF-FRGNFYMT-IIGEELDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 160 ~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~-~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~ 231 (344)
+.|+.+|+++ | ++++ +|++|+|+++++.+++..+-+ .+|+.++. .-.+. .....++..|++++.+|.+
T Consensus 64 ~lr~aia~~l~~~~g~~~~~~--~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~--~~~~~~~~~g~~v~~v~~~ 139 (374)
T PRK05839 64 SLREAQRGFFKRRFKIELKEN--ELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQ--IYEGAAIASRAKVLLMPLT 139 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCch--hhHHHHHhcCCEEEEeecc
Confidence 3455555443 6 5565 799999999999988876543 46777643 22222 1233345679999999886
Q ss_pred CCC-CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc-CCcc----CC
Q 035915 232 WLD-LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV-GEDR----LN 299 (344)
Q Consensus 232 ~~~-g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~-G~~~----LD 299 (344)
..+ ..++.... .+. +++++.++.-+| |+.++.+.+. .++++|+++++|-+-+-. ...+ ++
T Consensus 140 ~~~~~~~d~~~~--~~~------~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~~s~~~ 211 (374)
T PRK05839 140 KENDFTPSLNEK--ELQ------EVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPPPSLLE 211 (374)
T ss_pred cccCCcCCcchh--hhc------cccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCCCCHhh
Confidence 322 22332221 121 356777664445 9999996554 357899999999875421 1111 11
Q ss_pred C------CCCCCcEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 300 L------ALHRPDFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 300 L------s~l~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
+ ...+-=+++.|+=|. ||.|. .+|.++..++..+
T Consensus 212 ~~~~~~~~~~~~vi~~~SfSK~-~~~~GlRiG~ii~~~~~~~ 252 (374)
T PRK05839 212 ASILVGNESFKNVLVINSISKR-SSAPGLRSGFIAGDASILK 252 (374)
T ss_pred hhcccCccccCcEEEEeccccc-cCCccceeEEEecCHHHHH
Confidence 1 011122788999998 88773 4899888665543
No 264
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=98.17 E-value=5.5e-05 Score=75.74 Aligned_cols=187 Identities=17% Similarity=0.093 Sum_probs=113.9
Q ss_pred cccccchHHHHHHhhccC-CCChhhhhhHHHHHHHHHHHHHcCCCCC----CCeEEEeCCHHHHHHHHHhhCCCCCCCeE
Q 035915 129 LDRTQLEPSRLLDILTKK-SSFPGSFISIPEIQARNKVLKHCGLPDD----EYLVLFTPNYRDAMMLVGESYPFFRGNFY 203 (344)
Q Consensus 129 ~s~v~~~~~~L~~~L~gn-ss~~g~~as~~le~AR~~IA~~Lga~p~----ey~VVFTsnaTeAlnlva~sl~~~~Gd~i 203 (344)
...+++..+.++...++. +...| +..||++||++++-+++ ..+|+.|+|+++|+.+++.++. ++|..|
T Consensus 81 ~~a~~Av~~al~Sgk~N~Yaps~G------~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA-~p~aNI 153 (447)
T KOG0259|consen 81 QEAEQAVVDALRSGKGNGYAPSVG------ILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLA-NPGANI 153 (447)
T ss_pred HHHHHHHHHHHhcCCCCCcCCccc------cHHHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhc-CCCCce
Confidence 344555555555543333 22333 45599999999875431 1279999999999999999986 677665
Q ss_pred E-EcCCcCHHHHHHHHHcCCcEEEEEeCC-CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-ccccccHH---HHHH-
Q 035915 204 M-TIIGEELDYVREFASFKESKVILAPEA-WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-NGTRYSMH---WISE- 276 (344)
Q Consensus 204 v-S~~eH~~~~ir~la~~~G~kV~~vp~~-~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-NG~i~Pl~---~Ia~- 276 (344)
+ ---+.+.. ..+|...|.+|++..+- ..+-+||.++++.++++++ ..+|.+--.| +|.++.-+ .|++
T Consensus 154 LlPrPGfp~Y--~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT----~AivviNP~NPcGnVys~~HL~kiae~ 227 (447)
T KOG0259|consen 154 LLPRPGFPLY--DTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENT----VAIVVINPNNPCGNVYSEDHLKKIAET 227 (447)
T ss_pred ecCCCCCchH--HHhhhhcCceeEeecccCcccceechHHHHHhhccCe----eEEEEeCCCCCCcccccHHHHHHHHHH
Confidence 4 33333322 23466789999984321 1134799999999998742 4555554332 39988873 4443
Q ss_pred HHhCCcEEEecccc--cCcCCcc-CCCC---CCCCcEEEEccccCCCCCCC-ceEEEEEe
Q 035915 277 AHRNSWHVLLDATA--LVVGEDR-LNLA---LHRPDFVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 277 ar~~g~~vlvDAaQ--a~~G~~~-LDLs---~l~~DFvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
|++.|+.++-|=+= .+-|-.| +.+. ..=|=..+.+.-|- +-.|. .+|-+.+.
T Consensus 228 A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKr-W~VPGWRlGWi~~h 286 (447)
T KOG0259|consen 228 AKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKR-WIVPGWRLGWIALH 286 (447)
T ss_pred HHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccc-cccCCceeeeEEEe
Confidence 58999999988642 2213222 2233 22334445556664 34473 47877664
No 265
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.17 E-value=4.3e-05 Score=76.03 Aligned_cols=161 Identities=12% Similarity=0.035 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC-CC-------CCC-CeEE-EcCCcC--HHHHHHHHHc---
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY-PF-------FRG-NFYM-TIIGEE--LDYVREFASF--- 220 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl-~~-------~~G-d~iv-S~~eH~--~~~ir~la~~--- 220 (344)
....+.-++++++++. + .++|++++|||+..++... .+ .+| +.++ ..-.+| ......+...
T Consensus 82 ~~~~~l~~~l~~~~~~--~--~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~ 157 (396)
T PRK04073 82 DQLGPWYEKVAKLTGK--D--MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEY 157 (396)
T ss_pred HHHHHHHHHHHhcCCC--C--eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCccc
Confidence 3445566777777764 2 6999999999877654422 11 134 4454 334444 2111111110
Q ss_pred -CCc-----EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc----HHHHHH-HHhCCcEEEec
Q 035915 221 -KES-----KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS----MHWISE-AHRNSWHVLLD 287 (344)
Q Consensus 221 -~G~-----kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P----l~~Ia~-ar~~g~~vlvD 287 (344)
.+. .+..+|.+ +.++|++.+++ ++++|.+...+| |.+.| ++.|.+ |+++|+++++|
T Consensus 158 ~~~~~~~~~~~~~~~~~------d~~~l~~~i~~-----~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D 226 (396)
T PRK04073 158 KRGFGPMLPGIKKIPYG------DLEALKAAITP-----NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIAD 226 (396)
T ss_pred ccCCCCCCCCceEeCCC------CHHHHHHhccc-----CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 000 12223321 45778887754 467777776654 99987 555644 68999999999
Q ss_pred cccc-CcCCc----cCCCCCCCCcEEEEccccCCCCCC-CceEEEEEeCCCccc
Q 035915 288 ATAL-VVGED----RLNLALHRPDFVLCNLDNTQNAQP-SKITCLLIRKKSFDT 335 (344)
Q Consensus 288 AaQa-~~G~~----~LDLs~l~~DFvv~S~HK~l~G~P-~GiG~L~Vr~~~~~~ 335 (344)
-+|. + |.. ..+.....+|++++| |. +|++ --+|+++.+++..+.
T Consensus 227 Ev~~g~-g~~g~~~~~~~~~~~pdi~~~s--K~-lg~gg~~ig~~~~~~~i~~~ 276 (396)
T PRK04073 227 EIQTGL-GRTGKLFACDWDNVTPDMYILG--KA-LGGGVFPISCVAANRDILGV 276 (396)
T ss_pred cchhCC-CcCcHHHHhhhcCCCCCEEEec--cc-ccCCCCcceEEEEcHHHHhh
Confidence 9998 4 532 224445679999886 98 7765 238999988766543
No 266
>PRK08637 hypothetical protein; Provisional
Probab=98.15 E-value=0.00011 Score=72.91 Aligned_cols=168 Identities=12% Similarity=0.068 Sum_probs=99.6
Q ss_pred HHHHHHHHHHHcC-----CCCCC-CeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEEEEEeC
Q 035915 158 EIQARNKVLKHCG-----LPDDE-YLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESKVILAPE 230 (344)
Q Consensus 158 le~AR~~IA~~Lg-----a~p~e-y~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV~~vp~ 230 (344)
....|+.+++++. .++++ .+|++|+|+++++.+++..+. .+||.|+. .-.++ .....++...|++++.+|.
T Consensus 46 ~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~-~~gd~Vlv~~P~y~-~~~~~~~~~~g~~vv~v~~ 123 (388)
T PRK08637 46 IPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFV-DQGDTVLLPDHNWG-NYKLTFNTRRGAEIVTYPI 123 (388)
T ss_pred CHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhc-CCCCEEEEcCCCCc-cHHHHHHHhcCCEEEEecc
Confidence 4557777776652 33221 268999999999999998874 68888642 22222 1122223346899999887
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH----HHh-----CCcEEEecccccCc---CCc
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE----AHR-----NSWHVLLDATALVV---GED 296 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~-----~g~~vlvDAaQa~~---G~~ 296 (344)
..++..++.++|++.++... ...+.++.++.-+| |..++.+.+.+ |++ ++++++.|-+-.-. +..
T Consensus 124 ~~~~~~~d~~~l~~~~~~~~-~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~ 202 (388)
T PRK08637 124 FDEDGGFDTDALKEALQAAY-NKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSY 202 (388)
T ss_pred cCCCCcCCHHHHHHHHHhhc-cCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCcc
Confidence 32234578999988876100 01345555554345 99999854432 343 79999999875310 221
Q ss_pred cCCC-C---CCCCcE--E-EEccccCCCCCCC-ceEEEEEe
Q 035915 297 RLNL-A---LHRPDF--V-LCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 297 ~LDL-s---~l~~DF--v-v~S~HK~l~G~P~-GiG~L~Vr 329 (344)
..++ . ...-.. + +.|+-|. |+.|. .+|.+++.
T Consensus 203 ~~~~~~~~~~~~~~vi~i~~~s~SK~-~~~pGlRlG~~~~~ 242 (388)
T PRK08637 203 KESLFAALANLHSNILAVKLDGATKE-EFVWGFRVGFITFG 242 (388)
T ss_pred chhhHHHhhcccccceEEEecccccc-CCCcccceEEEEEc
Confidence 1111 1 111122 2 2389997 77673 38888764
No 267
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=98.13 E-value=6.7e-05 Score=74.87 Aligned_cols=160 Identities=11% Similarity=-0.000 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcE------
Q 035915 158 EIQARNKVLKHC------GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMT-IIGEELDYVREFASFKESK------ 224 (344)
Q Consensus 158 le~AR~~IA~~L------ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~k------ 224 (344)
..+.|+.||+++ +++++ +|++|+|+++++.++... +.+||.|+. .-.+.. ....++..|.+
T Consensus 78 ~~~LR~aia~~~~~~~g~~~~~~--~I~it~Ga~~al~~l~~~--~~~gd~V~v~~P~Y~~--~~~~~~~~g~~~~~~~~ 151 (409)
T PRK07590 78 YDFLREKIAENDYQARGCDISAD--EIFISDGAKCDTGNILDI--FGPDNTIAVTDPVYPV--YVDTNVMAGRTGEANED 151 (409)
T ss_pred CHHHHHHHHHHHHHhcCCcCChh--hEEECCCHHHHHHHHHHh--cCCCCEEEEeCCCCcc--hHHHHHHcCCccccccc
Confidence 345788888875 67776 799999999999987543 368998653 222321 22334445765
Q ss_pred -----EEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc
Q 035915 225 -----VILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV 293 (344)
Q Consensus 225 -----V~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~ 293 (344)
++.+|.+..++ +..+ + .. .+++++.++.-+| |..++.+.+. .|++++++++.|-+..-.
T Consensus 152 ~~~~~~~~v~~~~~~~-~~~d-~----~~----~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~ 221 (409)
T PRK07590 152 GRYSGIVYLPCTAENN-FVPE-L----PE----EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAF 221 (409)
T ss_pred ccccceeEeecccccC-Cccc-C----cc----cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhh
Confidence 77788753221 2221 1 11 2456666653345 9999986543 247899999999876520
Q ss_pred ---CCccCCCCCCC----CcEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 294 ---GEDRLNLALHR----PDFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 294 ---G~~~LDLs~l~----~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
+..+..+..+. --+++.|+=|. ||.|. .+|.++..++..+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~vi~~~SfSK~-~~~pGlRiG~~i~~~~li~ 269 (409)
T PRK07590 222 ISDPSLPHSIYEIEGARECAIEFRSFSKT-AGFTGTRCAYTVVPKELKG 269 (409)
T ss_pred ccCCCCCcchhhCCCcccceEEEecCccc-cCCcCceeEEEEcCHHHhh
Confidence 11112232221 23667899999 87672 3899888766554
No 268
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.12 E-value=6.2e-05 Score=81.19 Aligned_cols=169 Identities=12% Similarity=0.065 Sum_probs=111.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCC--
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWL-- 233 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~-- 233 (344)
..+.+|.+..|+.+|++. ....|.|+|.|+..++.+. ..+||.|+..-.-|........--.|++-++++....
T Consensus 174 G~i~eAq~~AA~~fgAd~---tyFlvNGTS~gn~a~i~a~-~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~n~~ 249 (720)
T PRK13578 174 GAAKDAQKHAAKVFNADK---TYFVLNGTSASNKVVTNAL-LTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPF 249 (720)
T ss_pred hHHHHHHHHHHHHhCCCc---eEEEeCChhHHHHHHHHHh-cCCCCEEEeecccHHHHHHHHHHHcCCeEEEeecccccc
Confidence 467889999999999963 4666788888888888765 4789997755543311122111225888888764431
Q ss_pred --CCccCHHH-----HHHHhhhcC-C---C-CCeeEEEEeCccc-cccccHHHHHHH--HhCCcEEEecccccCcCCc--
Q 035915 234 --DLRIKGSQ-----LSQYFRRKC-K---H-TPKGLFSYPADIN-GTRYSMHWISEA--HRNSWHVLLDATALVVGED-- 296 (344)
Q Consensus 234 --~g~i~~~~-----L~~~l~~~~-~---~-~~t~LVa~~avSN-G~i~Pl~~Ia~a--r~~g~~vlvDAaQa~~G~~-- 296 (344)
-+.|+.++ |++.+.... . . .+.+++.++.-+- |+.++++.|.+. |..+ ++|+|-||.. |.
T Consensus 250 Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTYdG~~ydi~~I~~~~~h~~~-~llvDEAhga--h~~F 326 (720)
T PRK13578 250 GFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTYDGTIYNARQVVDKIGHLCD-YILFDSAWVG--YEQF 326 (720)
T ss_pred CCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCCcceeecHHHHHHHhhccCC-cEEEeCcchh--hhcc
Confidence 12345444 887776420 0 0 1246777764332 999999888653 6777 9999998874 33
Q ss_pred -cC--CCC----CCCCc----EEEEccccCCCCCCCceEEEEEeCCC
Q 035915 297 -RL--NLA----LHRPD----FVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 297 -~L--DLs----~l~~D----Fvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
++ ++. +.++| |++-|.||. +++=+....|-++.+.
T Consensus 327 ~p~~~~~p~~al~~GaD~p~i~v~QStHKt-L~alTQaS~LHvk~~~ 372 (720)
T PRK13578 327 IPMMADCSPLLLELNENDPGIFVTQSVHKQ-QAGFSQTSQIHKKDNH 372 (720)
T ss_pred CcccccCChhhhhcCCCCCCeEEEEChhhc-chhhhhHhhhhcCCcc
Confidence 21 121 35899 999999999 7667677777776644
No 269
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.11 E-value=0.00016 Score=72.81 Aligned_cols=161 Identities=14% Similarity=0.122 Sum_probs=105.0
Q ss_pred HHHHHHHHHHcC--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEeCCC--C
Q 035915 159 IQARNKVLKHCG--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEELDYVREFASFKESKVILAPEAW--L 233 (344)
Q Consensus 159 e~AR~~IA~~Lg--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp~~~--~ 233 (344)
+...+...+..| .++++ +|+.|.|+++|+.++..++ ..+||+++ ..-.+.. ...+.+-.|.++..+|.+. .
T Consensus 72 eaia~~~~~~~~~~~~~~~-eiivt~Ga~~al~~~~~a~-~~pGDeVlip~P~Y~~--y~~~~~~~gg~~v~v~l~~~~~ 147 (393)
T COG0436 72 EAIAEKYKRRYGLDVDPEE-EIIVTAGAKEALFLAFLAL-LNPGDEVLIPDPGYPS--YEAAVKLAGGKPVPVPLDEEEN 147 (393)
T ss_pred HHHHHHHHHHhCCCCCCCC-eEEEeCCHHHHHHHHHHHh-cCCCCEEEEeCCCCcC--HHHHHHhcCCEEEEEeCCcCcc
Confidence 333344444444 34443 6999999999999998887 57899854 3333331 2333344689999998642 2
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCc---C---CccCCCC
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVV---G---EDRLNLA 301 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~---G---~~~LDLs 301 (344)
+-.++.++|++.+++ +|+++.+.-=|| |.+++-+.+.+ |++++++++.|-+=.-. | +..+.+.
T Consensus 148 ~f~~d~~~l~~~i~~-----ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~ 222 (393)
T COG0436 148 GFKPDLEDLEAAITP-----KTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELA 222 (393)
T ss_pred CCcCCHHHHHhhcCc-----cceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcC
Confidence 457899999999986 477777765556 99999865543 58899999998652210 1 0111222
Q ss_pred CC-CCcEEEEccccCCCCCCC-ceEEEEEe
Q 035915 302 LH-RPDFVLCNLDNTQNAQPS-KITCLLIR 329 (344)
Q Consensus 302 ~l-~~DFvv~S~HK~l~G~P~-GiG~L~Vr 329 (344)
.. ..-+.+-|+=|. |+.+- .+|.++..
T Consensus 223 ~~~~~~i~i~s~SK~-~~mtGwRvG~~v~~ 251 (393)
T COG0436 223 GARDRTITINSFSKT-YGMTGWRIGWVVGP 251 (393)
T ss_pred CCcceEEEEeccccc-ccccccceeEeecC
Confidence 11 223566699998 88552 48999887
No 270
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=98.09 E-value=2.9e-05 Score=77.36 Aligned_cols=162 Identities=7% Similarity=-0.026 Sum_probs=94.8
Q ss_pred HHHHHHHHHHc------CCCCCCCeEEEeCCHHHHHHHHHhhCCC----CCCCeEEE--cCCcCHHHHHHHHHcCC----
Q 035915 159 IQARNKVLKHC------GLPDDEYLVLFTPNYRDAMMLVGESYPF----FRGNFYMT--IIGEELDYVREFASFKE---- 222 (344)
Q Consensus 159 e~AR~~IA~~L------ga~p~ey~VVFTsnaTeAlnlva~sl~~----~~Gd~ivS--~~eH~~~~ir~la~~~G---- 222 (344)
.+.|+.||+++ +++++ +|++|+|+++|+.+++..+.- .+|+.++. .-.++. ....+...+
T Consensus 77 ~~LR~aia~~~~~~~g~~v~~~--~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~--y~~~~~~~~~~~~ 152 (416)
T PRK09440 77 DELIEALAALLNERYGWNISPQ--NIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIG--YADAGLEEDLFVS 152 (416)
T ss_pred HHHHHHHHHHHHHHhCCCCChh--hEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchh--hHHHhhccCceee
Confidence 45777777776 36665 799999999999999887732 35777654 233331 111111111
Q ss_pred cEEEEEeCCCC--CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcC
Q 035915 223 SKVILAPEAWL--DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVG 294 (344)
Q Consensus 223 ~kV~~vp~~~~--~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G 294 (344)
.....++.+.. +..++.++|+ +.. +++++.++.-+| |++++.+++. .|+++++++++|-+... .
T Consensus 153 ~~~~~~~~~~~~~~~~~d~~~l~--~~~-----~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~-~ 224 (416)
T PRK09440 153 YRPNIELLPEGQFKYHVDFEHLH--IDE-----DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGP-P 224 (416)
T ss_pred cccccccccccccccCCCHHHcc--cCC-----CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccc-c
Confidence 11122232211 1246777765 222 356666664456 9999985443 35789999999999863 2
Q ss_pred CccC---CCCC--CCCcEEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 295 EDRL---NLAL--HRPDFVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 295 ~~~L---DLs~--l~~DFvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
...+ ++.. .+-=+++.|+-|+ +.|. .+|.++..+++.+
T Consensus 225 ~~~~~~~~~~~~~~~~vI~~~SfSK~--~~pGlRiG~~i~~~~l~~ 268 (416)
T PRK09440 225 FPGIIFSEATPLWNPNIILCMSLSKL--GLPGVRCGIVIADEEIIE 268 (416)
T ss_pred CCCcchhhcCccccCCeEEEeccccc--CCCcceEEEEeCCHHHHH
Confidence 2111 1111 1122678899996 4452 4898887665543
No 271
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=98.08 E-value=8.6e-05 Score=72.60 Aligned_cols=153 Identities=14% Similarity=0.053 Sum_probs=95.4
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCccC
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLDLRIK 238 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i~ 238 (344)
.+.|+.+|+++|+++.+ +|++|+|+++++.++... +.+|+.++..-. -......++..|++++.+|.+.
T Consensus 56 ~~L~~~ia~~~~~~~~~-~I~i~~Gs~e~i~~l~~~--~~~g~v~v~~P~--y~~y~~~~~~~g~~~~~v~~~~------ 124 (339)
T PRK06959 56 DGLAACAARYYGAPDAA-HVLPVAGSQAAIRALPAL--LPRGRVGIAPLA--YSEYAPAFARHGHRVVPLDEAA------ 124 (339)
T ss_pred HHHHHHHHHHhCCCCcc-cEEECcCHHHHHHHHHHh--cCCCeEEEcCCC--cHHHHHHHHHCCCEEEeecccc------
Confidence 57899999999996422 799999999999987653 456764432212 1223344566799988887643
Q ss_pred HHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCcCCccCCCCCC-CCc--EEE
Q 035915 239 GSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVVGEDRLNLALH-RPD--FVL 309 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~G~~~LDLs~l-~~D--Fvv 309 (344)
+.+. . .++++.+..-+| |+.++.+++.+ +++++.++++|=+-.- -.....+..+ +.+ +++
T Consensus 125 -~~~~----~-----~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~-~~~~~s~~~~~~~~~vi~l 193 (339)
T PRK06959 125 -DTLP----A-----ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFAD-TLPAASLAAHTDRPGLVVL 193 (339)
T ss_pred -hhcc----c-----cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCcc-CCCcccchhccCCCCEEEE
Confidence 1111 1 122333333345 99999976653 3467888899987553 2111122111 112 788
Q ss_pred EccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 310 CNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 310 ~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
.|+=|. ||.|. .+|.++..++..+
T Consensus 194 ~SfSK~-~gl~GlRiGy~v~~~~li~ 218 (339)
T PRK06959 194 RSVGKF-FGLAGVRAGFVLAAPALLA 218 (339)
T ss_pred ecChhh-cCCcchheEEEecCHHHHH
Confidence 899999 88672 3799988765544
No 272
>PLN02231 alanine transaminase
Probab=98.05 E-value=0.0001 Score=77.07 Aligned_cols=168 Identities=7% Similarity=-0.066 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHc----C--CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEe
Q 035915 157 PEIQARNKVLKHC----G--LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 157 ~le~AR~~IA~~L----g--a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp 229 (344)
-+.+.|+.||+++ | ++++ +|++|+|+++|+.+++..+--.+||.|+.. -.++. ....++..|.+++.+|
T Consensus 169 G~~~lReaIA~~~~~r~g~~~~pe--~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~--y~~~~~~~g~~~v~~~ 244 (534)
T PLN02231 169 GIKGLRDAIAAGIEARDGFPADPN--DIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPL--YSASIALHGGTLVPYY 244 (534)
T ss_pred CcHHHHHHHHHHHHhccCCCCCcc--cEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChh--HHHHHHHcCCEEEEEe
Confidence 3567888888877 4 3454 799999999999999998743468886532 22331 1222345688998888
Q ss_pred CCCCC-CccCHHHHHHHhhhcC-CCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCc----CCcc
Q 035915 230 EAWLD-LRIKGSQLSQYFRRKC-KHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVV----GEDR 297 (344)
Q Consensus 230 ~~~~~-g~i~~~~L~~~l~~~~-~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~----G~~~ 297 (344)
.+..+ ..++.++|++.++... +..+++++.+..-+| |.+++.+.+. .|++++++++.|-+-.-. +...
T Consensus 245 l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~ 324 (534)
T PLN02231 245 LDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKF 324 (534)
T ss_pred cCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCc
Confidence 76432 2578899998886411 111356655543345 9999996554 357899999999765420 1111
Q ss_pred CCCCCC---------CCc-EEEEccccCCCCCCC-ceEEEEE
Q 035915 298 LNLALH---------RPD-FVLCNLDNTQNAQPS-KITCLLI 328 (344)
Q Consensus 298 LDLs~l---------~~D-Fvv~S~HK~l~G~P~-GiG~L~V 328 (344)
..+..+ ++. +++.|+=|.++|.|- .+|.+.+
T Consensus 325 ~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~ 366 (534)
T PLN02231 325 HSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEV 366 (534)
T ss_pred ccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEE
Confidence 111111 112 344589996245452 4788776
No 273
>PLN02955 8-amino-7-oxononanoate synthase
Probab=97.98 E-value=0.00046 Score=71.41 Aligned_cols=157 Identities=12% Similarity=0.059 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC------------CC-CCCCeEEEcCCcC---HHHHHHHHHc
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY------------PF-FRGNFYMTIIGEE---LDYVREFASF 220 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl------------~~-~~Gd~ivS~~eH~---~~~ir~la~~ 220 (344)
..++.-+++|+|+|.+. .++|.+|....+- ++.++ +. .+++.++++-..| .+.++ +++.
T Consensus 148 ~h~~LE~~LA~f~g~e~---all~sSGy~AN~~-~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~~ 222 (476)
T PLN02955 148 YHRLLESSLADLKKKED---CLVCPTGFAANMA-AMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAER 222 (476)
T ss_pred HHHHHHHHHHHHHCCCc---EEEECChHHHHHH-HHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hccc
Confidence 44778889999999853 4677666655333 22222 11 2445566665544 22332 2333
Q ss_pred C-CcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-c-cccccHHHHHH-HHhCCcEEEecccccCcCCc
Q 035915 221 K-ESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-N-GTRYSMHWISE-AHRNSWHVLLDATALVVGED 296 (344)
Q Consensus 221 ~-G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-N-G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~ 296 (344)
+ ++++...+-+ |.++|++.+... .. ...+|.+..+- . |.+.|++++.+ ++++|++++||=+|+. |..
T Consensus 223 ~~~a~~~~f~HN------D~~~Le~~L~~~-~~-~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~-Gv~ 293 (476)
T PLN02955 223 QGNVEVFVYRHC------DMYHLNSLLSSC-KM-KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGT-FVC 293 (476)
T ss_pred cCCceEEEeCCC------CHHHHHHHHHhC-CC-CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccC-cee
Confidence 3 4777766643 467888888642 11 23455555554 3 99999987765 5789999999999997 643
Q ss_pred c---------CCCCCCCCcEEEEccccCCCCCCCceEEEEEeCC
Q 035915 297 R---------LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 297 ~---------LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
- +++. .++|+++.++=|. ||.. -|++..+++
T Consensus 294 G~~G~G~~e~~g~~-~di~ii~~TLsKA-~G~~--GGfi~gs~~ 333 (476)
T PLN02955 294 GENGGGVAEEFNCE-ADVDLCVGTLSKA-AGCH--GGFIACSKK 333 (476)
T ss_pred cCCCCcHHHHhCCC-CCCcEEEEeCccc-hhcc--CceeecHHH
Confidence 2 2232 3689999999999 8743 344555553
No 274
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=97.96 E-value=0.00013 Score=74.44 Aligned_cols=166 Identities=13% Similarity=0.070 Sum_probs=114.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC---CC-CC-C--eEEEcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP---FF-RG-N--FYMTIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~---~~-~G-d--~ivS~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
...++-+-++.+||++++.-. .-|.|.||++-+.-..+. .. +| + ++++..- -..+|..+++..+++++.+|
T Consensus 121 ~e~~~Vnm~~~L~~~~~~~~g-~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~-v~~a~eK~a~yf~v~l~~V~ 198 (491)
T KOG1383|consen 121 LEAECVNMIANLFNAPSDSCG-CGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQN-VHAAFEKAARYFEVELREVP 198 (491)
T ss_pred HHHHHHHHHHHHhcCCccccC-ccccccchHHHHHHHHHHHHHHhccCCCCccccchHH-HHHHHHHHHhhEEEEEEeee
Confidence 456778889999999865322 345678888333222221 11 12 1 1222211 02357778888899999999
Q ss_pred CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc--ccccccHHHHHH-HHh-CCcEEEecccccC--c-----CCccC
Q 035915 230 EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI--NGTRYSMHWISE-AHR-NSWHVLLDATALV--V-----GEDRL 298 (344)
Q Consensus 230 ~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS--NG~i~Pl~~Ia~-ar~-~g~~vlvDAaQa~--~-----G~~~L 298 (344)
++..+-++|...+.+.+++ +|.+++..+-+ +|.+=|++.+.+ +.+ .++.+|+||+-.= . .-.++
T Consensus 199 ~~~~~~~~D~~k~~~~i~e-----Nti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~f 273 (491)
T KOG1383|consen 199 LDEGDYRVDPGKVVRMIDE-----NTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEF 273 (491)
T ss_pred ccccceEecHHHHHHHhcc-----ceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCcccc
Confidence 9876778999999999876 47777777666 499999998875 455 9999999997531 0 22357
Q ss_pred CCCCCCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 299 NLALHRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 299 DLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
||..-++--+++++||. -..|+|+|..+-|.
T Consensus 274 dFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~ 304 (491)
T KOG1383|consen 274 DFRVPGVTSISADGHKY-GLAPAGSSWVLYRN 304 (491)
T ss_pred ccCCCCceeEeecccee-eeeecCcEEEEEcc
Confidence 77777888999999995 33499999766554
No 275
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.96 E-value=0.00019 Score=72.59 Aligned_cols=153 Identities=11% Similarity=0.017 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE-EcCCcC--HHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM-TIIGEE--LDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv-S~~eH~--~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
.......++.+-|+.. .++|.||.+.....+..-. ..|++++ +..-+. ...++.+..+.|+++..+..+
T Consensus 79 ~~~le~~iaal~ga~~---~l~fsSGmaA~~~al~~L~--~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~--- 150 (409)
T KOG0053|consen 79 RDVLESGIAALEGAAH---ALLFSSGMAAITVALLHLL--PAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD--- 150 (409)
T ss_pred hHHHHHHHHHHhCCce---EEEecccHHHHHHHHHHhc--CCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh---
Confidence 3445667888888852 5777777765544444333 4677765 333344 446777778889998887654
Q ss_pred CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCCCCCcEEEEc
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCN 311 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S 311 (344)
+.+.++..+.+ ++++|-+-.-+| ..+.||+.|++ +|++|+.++||.+=+- + ...|-=.+++|.++-|
T Consensus 151 ---~~~~~~~~i~~-----~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~-p-~~~~pL~lGADIV~hS 220 (409)
T KOG0053|consen 151 ---DLKKILKAIKE-----NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGS-P-YNQDPLPLGADIVVHS 220 (409)
T ss_pred ---hHHHHHHhhcc-----CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEeCCcCc-c-cccChhhcCCCEEEEe
Confidence 34567777765 477888877778 99999988865 6999999999998776 4 2334335789999999
Q ss_pred cccCCCCCCCc--eEEEEEe
Q 035915 312 LDNTQNAQPSK--ITCLLIR 329 (344)
Q Consensus 312 ~HK~l~G~P~G--iG~L~Vr 329 (344)
+=|| ++|-.. .|++.++
T Consensus 221 aTKy-i~Ghsdvi~G~iv~n 239 (409)
T KOG0053|consen 221 ATKY-IGGHSDVIGGSVVLN 239 (409)
T ss_pred eeee-ecCCcceeeeEEecC
Confidence 9999 886543 3455444
No 276
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=97.95 E-value=0.00024 Score=70.19 Aligned_cols=163 Identities=12% Similarity=0.018 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh---CCCCCCC----eEEE-cCCcC--HHHHHHHHHcCCcEE
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES---YPFFRGN----FYMT-IIGEE--LDYVREFASFKESKV 225 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s---l~~~~Gd----~ivS-~~eH~--~~~ir~la~~~G~kV 225 (344)
....+.-++++++.+. + .|+||+|+|||+..++.. +.+.+|+ ++++ .-.+| ...+.. + .+...
T Consensus 73 ~~~~~la~~l~~~~~~--~--~v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~-~--~~~~~ 145 (389)
T PRK01278 73 PEQERLAERLVENSFA--D--KVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIA-A--GGQEK 145 (389)
T ss_pred hHHHHHHHHHHhhCCC--C--EEEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHh-c--cCChh
Confidence 3445566667776643 3 699999999998877543 3233454 5543 33344 211111 1 11111
Q ss_pred EE---EeCCCC---CCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--c-ccccHH---HHH-HHHhCCcEEEecccccC
Q 035915 226 IL---APEAWL---DLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--G-TRYSMH---WIS-EAHRNSWHVLLDATALV 292 (344)
Q Consensus 226 ~~---vp~~~~---~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G-~i~Pl~---~Ia-~ar~~g~~vlvDAaQa~ 292 (344)
.. .|.... -...+.+++++.+++ ++++|.+...+| | ..+|-+ .|. .|+++|+++++|-+|.-
T Consensus 146 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-----~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g 220 (389)
T PRK01278 146 YLEGFGPLVPGFDQVPFGDIEALKAAITP-----NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCG 220 (389)
T ss_pred hcccCCCCCCCceEeCCCCHHHHHHhhCC-----CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccC
Confidence 10 011000 001367788888864 466777665554 6 444554 443 35899999999999982
Q ss_pred cCCc----cCCCCCCCCcEEEEccccCCCCCCCc--eEEEEEeCCCccc
Q 035915 293 VGED----RLNLALHRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFDT 335 (344)
Q Consensus 293 ~G~~----~LDLs~l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~~ 335 (344)
.|.. ..+.....+|.+++ -|. ++ + | +|+++.+++..+.
T Consensus 221 ~g~~g~~~~~~~~~~~pdi~t~--sK~-l~-~-G~~ig~~~~~~~~~~~ 264 (389)
T PRK01278 221 MGRTGKLFAHEWAGVTPDIMAV--AKG-IG-G-GFPLGACLATEEAAKG 264 (389)
T ss_pred CCcCCcceeecccCCCCCEEEE--ehh-cc-C-CcceEEEEEcHHHHhc
Confidence 1432 11222456887655 588 66 3 4 9999988765443
No 277
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=97.93 E-value=0.0002 Score=70.40 Aligned_cols=163 Identities=12% Similarity=0.069 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC-CC-----CCCeEE-EcCCcC-HHHHHHHHHcCCcEEE-
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP-FF-----RGNFYM-TIIGEE-LDYVREFASFKESKVI- 226 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~-~~-----~Gd~iv-S~~eH~-~~~ir~la~~~G~kV~- 226 (344)
...++..+.++++.|. + .|+||+|+++|+.+++.... +. ..+.++ ..-.+| .. ...+.. .+....
T Consensus 81 ~~~~~la~~l~~~~~~--~--~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~-~~~~~~-~~~~~~~ 154 (396)
T PRK02627 81 EPQEELAEKLVELSGM--D--KVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRT-LATLSA-TGQPKYQ 154 (396)
T ss_pred HHHHHHHHHHHhhcCC--C--EEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCccc-HHHHHh-cCCcccc
Confidence 3445666777777765 3 69999999999998777331 11 114444 333333 11 111111 111111
Q ss_pred --EEeCCCCCC----ccCHHHHHHHhhhcCCCCCeeEEEEeCccc--c-ccccH---HHHH-HHHhCCcEEEeccccc-C
Q 035915 227 --LAPEAWLDL----RIKGSQLSQYFRRKCKHTPKGLFSYPADIN--G-TRYSM---HWIS-EAHRNSWHVLLDATAL-V 292 (344)
Q Consensus 227 --~vp~~~~~g----~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G-~i~Pl---~~Ia-~ar~~g~~vlvDAaQa-~ 292 (344)
..|... +- .-+.++|++.+.+ ++++|.+....| | ..+|. +.|. .|+++|+++++|-++. +
T Consensus 155 ~~~~~~~~-~~~~~~~~d~~~l~~~i~~-----~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~ 228 (396)
T PRK02627 155 EGFEPLVE-GFIYVPFNDIEALKAAITD-----KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGM 228 (396)
T ss_pred ccCCCCCC-CceEeCCCCHHHHHHhcCC-----CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCC
Confidence 111110 00 0167788888753 467777654443 6 34554 3443 3588999999999998 4
Q ss_pred cCCc----cCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 293 VGED----RLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 293 ~G~~----~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
|.. .++.....+|++++| |. +++--.+|+++.+++..+
T Consensus 229 -g~~g~~~~~~~~~~~pdi~t~s--K~-~~~G~rig~~~~~~~~~~ 270 (396)
T PRK02627 229 -GRTGKLFAYQHYGIEPDIMTLA--KG-LGGGVPIGAVLAKEKVAD 270 (396)
T ss_pred -CccCceeeehhcCCCCCEEEEc--ch-hhCCcccEEEEEcHHHHh
Confidence 432 122334568988776 98 772223899998876544
No 278
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=97.91 E-value=0.00052 Score=74.13 Aligned_cols=165 Identities=12% Similarity=0.044 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCC--
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWL-- 233 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~-- 233 (344)
..+.+|.+..|+.+||+. ....|.|+|.|++.++.+. ..+||.++..-.-|......+ .-.|++-++++..+.
T Consensus 195 G~i~eAe~~aA~~fgAd~---tyfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~~aL-ilsga~PVYl~P~~n~~ 269 (713)
T PRK15399 195 GPHLEAEEYIARTFGAEQ---SYIVTNGTSTSNKIVGMYA-APAGSTLLIDRNCHKSLAHLL-MMSDVVPIWLKPTRNAL 269 (713)
T ss_pred hHHHHHHHHHHHHhCCCc---EEEEeCChHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHH-HHcCCeeEEeccccccc
Confidence 467889999999999963 4666788888888888776 578999775554331112222 235888888764431
Q ss_pred --CCccCH-----HHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHhCCcEE-EecccccCcCCc---cC--
Q 035915 234 --DLRIKG-----SQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHRNSWHV-LLDATALVVGED---RL-- 298 (344)
Q Consensus 234 --~g~i~~-----~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~~g~~v-lvDAaQa~~G~~---~L-- 298 (344)
-+.|+. +.|++.+....+..+.+.+.++.- | |+.+++++|.+.- |+.+ |+|-||.. |. |+
T Consensus 270 Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~--g~~~ilvDEAhga--h~~F~p~~~ 344 (713)
T PRK15399 270 GILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL--DVPSIHFDSAWVP--YTHFHPIYQ 344 (713)
T ss_pred CCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh--CCCEEEEeccchh--hhhcCcccC
Confidence 123454 788888864321112245555533 4 9999999886533 6666 79999873 22 21
Q ss_pred CCCCC----CCcEE---EEccccCCCCCCCceEEEEEeCC
Q 035915 299 NLALH----RPDFV---LCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 299 DLs~l----~~DFv---v~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
+.+.+ ++|.+ +-|.||. +++-+....|-++..
T Consensus 345 ~~sam~~~~~aD~~i~~tQStHKt-L~alTQaS~iHvk~~ 383 (713)
T PRK15399 345 GKSGMSGERVPGKVIFETQSTHKM-LAAFSQASLIHIKGE 383 (713)
T ss_pred CcChhhCCCCCCeeeeeeeehhcc-ccccchheeeeecCC
Confidence 12222 45666 9999999 776778888888764
No 279
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=97.88 E-value=0.00023 Score=76.84 Aligned_cols=165 Identities=10% Similarity=0.013 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCC-
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLD- 234 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~- 234 (344)
..+.+|.+.+|+.+||+. ....|.|+|.|++.++.+. ..+||.++..-.-|......+ .-.|++-++++..+..
T Consensus 195 G~i~eAe~~AA~~fgAd~---tyfvvNGTS~~n~av~~a~-~~~Gd~VLvdRN~HKSv~haL-ilsga~PVYl~P~rn~~ 269 (714)
T PRK15400 195 GPHKEAEEYIARVFNADR---SYMVTNGTSTANKIVGMYS-APAGSTVLIDRNCHKSLTHLM-MMSDVTPIYFRPTRNAY 269 (714)
T ss_pred hHHHHHHHHHHHHhCCCc---EEEEeCchHHHHHHHHHHh-cCCCCEEEeecccHHHHHHHH-HHcCCeEEEeccccccc
Confidence 467889999999999963 3566678888888887765 578999775554331112222 2358888887654311
Q ss_pred ---CccC-----HHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccC-----
Q 035915 235 ---LRIK-----GSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRL----- 298 (344)
Q Consensus 235 ---g~i~-----~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~L----- 298 (344)
+.|+ .+.|++.+....+..+...+.++. +| |+.++++.|.+ ++.++ +|+|-||.. |..+
T Consensus 270 Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~-pTYdG~~yd~~~I~~~~~~~~--ilvDEAwga--h~~F~p~~~ 344 (714)
T PRK15400 270 GILGGIPQSEFQHATIAKRVKETPNATWPVHAVITN-STYDGLLYNTDFIKKTLDVKS--IHFDSAWVP--YTNFSPIYE 344 (714)
T ss_pred CCccCCCccccCHHHHHHHHHhCccccCccEEEEEC-CCCccEecCHHHHHHHhCCCC--EEEEccchh--hhccCcccC
Confidence 2345 788888886432111222455553 34 99999988865 67766 789998874 3211
Q ss_pred CCCC--CCC---c--EEEEccccCCCCCCCceEEEEEeCC
Q 035915 299 NLAL--HRP---D--FVLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 299 DLs~--l~~---D--Fvv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
+.+. .++ | |++-|.||. +++-+....|-++..
T Consensus 345 ~~sam~~ga~~~~~i~vtQStHKt-L~alTQaS~LHvkg~ 383 (714)
T PRK15400 345 GKCGMSGGRVEGKVIYETQSTHKL-LAAFSQASMIHVKGD 383 (714)
T ss_pred CcChhhcCCCCCCceEEEEchhhc-ccchhHHhHHHHcCC
Confidence 1121 234 5 999999999 665666666666553
No 280
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.77 E-value=0.00029 Score=71.71 Aligned_cols=160 Identities=18% Similarity=0.117 Sum_probs=107.6
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHH-----HHHHHHhhCCCCCCC----e-EEEcCCcCHHHHHHHHHcCCcE
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRD-----AMMLVGESYPFFRGN----F-YMTIIGEELDYVREFASFKESK 224 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTe-----Alnlva~sl~~~~Gd----~-ivS~~eH~~~~ir~la~~~G~k 224 (344)
.+.+.+..+.+.+.-|-+ .|-+.+|+-. ++ ++++.|....|+ . ++-..-|..|... |.-.|.+
T Consensus 108 l~li~~Lq~~L~~ITG~D----avsLQP~AGAqGE~aGl-l~Ir~YHe~rG~~~R~~~LIP~SAHGTNPAS--Aam~G~~ 180 (496)
T COG1003 108 LELIYELQEWLKEITGMD----AVSLQPNAGAQGEYAGL-LAIRAYHESRGEGHRNICLIPDSAHGTNPAS--AAMAGFK 180 (496)
T ss_pred HHHHHHHHHHHHHhcCCc----eeeccCCCCcchhhHHH-HHHHHHHHHcCCCcCcEEEeeccccCCChhh--HhhcCce
Confidence 346678888888888874 4888876543 23 345555433343 3 3434445555332 2335999
Q ss_pred EEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-c--ccc-ccHHHHHH-HHhCCcEEEecccccC--cCCcc
Q 035915 225 VILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-N--GTR-YSMHWISE-AHRNSWHVLLDATALV--VGEDR 297 (344)
Q Consensus 225 V~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-N--G~i-~Pl~~Ia~-ar~~g~~vlvDAaQa~--~G~~~ 297 (344)
|+.|+.+. +|.+|.++|++.+.. ++-+++..+ | |.- ..|.+|++ +|++|..|..|+|-.= +|..+
T Consensus 181 VV~V~~~~-~G~VDlddLk~k~~~-------~~AalMiTnPsT~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~r 252 (496)
T COG1003 181 VVVVKCDE-NGNVDLDDLRAKAED-------NLAALMITNPSTLGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLAR 252 (496)
T ss_pred EEEEecCC-CCCccHHHHHHHhcc-------ceeEEEeccCcccccchhhHHHHHHHHHHcCCEEEecCcchhhhhcccc
Confidence 99999987 689999999998864 356666554 3 765 45666765 5999999999999763 13322
Q ss_pred CCCCCCCCcEEEEccccCCCCCCC-----ceEEEEEeCCC
Q 035915 298 LNLALHRPDFVLCNLDNTQNAQPS-----KITCLLIRKKS 332 (344)
Q Consensus 298 LDLs~l~~DFvv~S~HK~l~G~P~-----GiG~L~Vr~~~ 332 (344)
-.+++.|.+-+++||. |+.|- |.|=+-|+..+
T Consensus 253 --PGd~G~DV~HlNLHKT-F~iPHGGGGPG~GPvgVk~~L 289 (496)
T COG1003 253 --PGDMGFDVVHLNLHKT-FCIPHGGGGPGAGPVGVKAHL 289 (496)
T ss_pred --ccccccceEEeecccc-cccCCCCCCCCCCceehHhhc
Confidence 2467899999999999 75443 66766666544
No 281
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=97.77 E-value=0.00065 Score=67.77 Aligned_cols=163 Identities=14% Similarity=0.116 Sum_probs=111.3
Q ss_pred HHHHHHHHHHHHcC-CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 157 PEIQARNKVLKHCG-LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 157 ~le~AR~~IA~~Lg-a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
...+.|+.++++.| .+++ .|+.+.|++|.|.++.+.+. .+||.++.. -.+. .-...|+..|++++.+|...
T Consensus 58 ~~~~l~~a~a~~~~~~~~~--~V~~gnGsde~i~~l~~~~~-~~gd~vl~~~Ptf~--~Y~~~a~~~g~~~~~v~~~~-- 130 (356)
T COG0079 58 DYRELRAALAEYYGVVDPE--NVLVGNGSDELIELLVRAFV-EPGDTVLIPEPTFS--MYEIAAQLAGAEVVKVPLKE-- 130 (356)
T ss_pred cHHHHHHHHHHHhCCCCcc--eEEEcCChHHHHHHHHHHhh-cCCCEEEEcCCChH--HHHHHHHhcCCeEEEecccc--
Confidence 35678999999999 6655 68889999999999999884 578876533 2211 12334566799999999864
Q ss_pred CccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHHHh---CCcEEEeccccc--CcCCccCCCCCCCCc-
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHR---NSWHVLLDATAL--VVGEDRLNLALHRPD- 306 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~---~g~~vlvDAaQa--~~G~~~LDLs~l~~D- 306 (344)
..++.+.+...+.+ ++++|-+..=|| |..++.+.|..+.+ .+++|+||-|=. . +..-+++-. ..+
T Consensus 131 ~~~d~~~~~~~~~~-----~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~-~~~~~~l~~-~~~n 203 (356)
T COG0079 131 FRLDLDAILAAIRD-----KTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFS-PESSLELLK-YPPN 203 (356)
T ss_pred cccCHHHHHHhhhc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcC-Cchhhhhcc-CCCC
Confidence 46777888877765 356666664555 99999988865432 288999998532 2 211122222 344
Q ss_pred -EEEEccccCCCCCCC-ceEEEEEeCCCcc
Q 035915 307 -FVLCNLDNTQNAQPS-KITCLLIRKKSFD 334 (344)
Q Consensus 307 -Fvv~S~HK~l~G~P~-GiG~L~Vr~~~~~ 334 (344)
++.=|+=|. ||-|. -+|..+..+++.+
T Consensus 204 livlRTfSKa-~gLAGlRlGy~ia~~~~i~ 232 (356)
T COG0079 204 LIVLRTFSKA-FGLAGLRVGYAIANPELIA 232 (356)
T ss_pred EEEEEecHHh-hhcchhceeeccCCHHHHH
Confidence 677799998 88773 3788777665543
No 282
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=97.74 E-value=0.00027 Score=70.77 Aligned_cols=162 Identities=15% Similarity=0.087 Sum_probs=98.0
Q ss_pred HHHHHHHHcCCCCCCCeEEEe--CCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHH----------HcCCcEEEEE
Q 035915 161 ARNKVLKHCGLPDDEYLVLFT--PNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFA----------SFKESKVILA 228 (344)
Q Consensus 161 AR~~IA~~Lga~p~ey~VVFT--snaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la----------~~~G~kV~~v 228 (344)
.-+..|+.||+.. -+|=. -++|+|+.+.+.++ +++||++++..+-+.+++++.- +..|++...+
T Consensus 59 le~iyA~vfgaE~---ALVRpq~vSGTHAi~~~Lfg~-LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v 134 (403)
T PF06838_consen 59 LERIYADVFGAED---ALVRPQFVSGTHAIALALFGV-LRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREV 134 (403)
T ss_dssp HHHHHHHHCT-SE---EEEETTS-SHHHHHHHHHHHH---TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE-
T ss_pred HHHHHHHHhCchh---hhhcccccchHHHHHHHHHhc-CCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEE
Confidence 3444688999852 24433 28899999999887 6799999988887654454432 3468899999
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-ccc--ccHHHHHH----HH--hCCcEEEecccccCcCCc--c
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTR--YSMHWISE----AH--RNSWHVLLDATALVVGED--R 297 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i--~Pl~~Ia~----ar--~~g~~vlvDAaQa~~G~~--~ 297 (344)
|+.. ++.+|.+.+++.+++ +|++|.+.--.. ..| +.++.|++ +| +.++.++||=+= |.. .
T Consensus 135 ~L~~-dg~~D~~~i~~~~~~-----~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCY---GEFvE~ 205 (403)
T PF06838_consen 135 PLTE-DGTIDWEAIKKALKP-----NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCY---GEFVET 205 (403)
T ss_dssp -B-T-TSSB-HHHHHHHHHT-----TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TT---TTTTSS
T ss_pred eecC-CCCcCHHHHHHhhcc-----CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCc---ceeccc
Confidence 9876 589999999999985 589999884322 333 33456653 23 478999999743 322 1
Q ss_pred CCCCCCCCcEEEEccccCCCCC---CCceEEEEEeCCCccccc
Q 035915 298 LNLALHRPDFVLCNLDNTQNAQ---PSKITCLLIRKKSFDTST 337 (344)
Q Consensus 298 LDLs~l~~DFvv~S~HK~l~G~---P~GiG~L~Vr~~~~~~~~ 337 (344)
..-.+.++|.++.|+=|- .|| |+ =|.+.-|+++.+.++
T Consensus 206 ~EP~~vGADl~aGSLIKN-pGGgiApt-GGYIaGr~~lVe~~a 246 (403)
T PF06838_consen 206 QEPTEVGADLMAGSLIKN-PGGGIAPT-GGYIAGRKDLVERAA 246 (403)
T ss_dssp S-GGGGT-SEEEEETTSG-GGTTT-SS--EEEEESHHHHHHHH
T ss_pred cCccccchhheeccceeC-CCCCccCc-CCEEechHHHHHHHH
Confidence 112246899999999998 554 53 255555777766633
No 283
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=97.70 E-value=0.0025 Score=66.82 Aligned_cols=148 Identities=11% Similarity=0.014 Sum_probs=91.0
Q ss_pred eEEEeCCHHHHHHHHHhhC----CCCCCCeEEE-cCCcC-HHHHHHHHHcCCcEEEEEeCCCCC------CccCHHHHHH
Q 035915 177 LVLFTPNYRDAMMLVGESY----PFFRGNFYMT-IIGEE-LDYVREFASFKESKVILAPEAWLD------LRIKGSQLSQ 244 (344)
Q Consensus 177 ~VVFTsnaTeAlnlva~sl----~~~~Gd~ivS-~~eH~-~~~ir~la~~~G~kV~~vp~~~~~------g~i~~~~L~~ 244 (344)
+|+.|+|+|+|+..++.++ -..+||.|+. .-.+. ...+-.+ ...|++++.++.+..+ -.++.++|++
T Consensus 157 ~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l-~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~ 235 (521)
T TIGR03801 157 DLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPEL-PRYDFEVVRIKADEMTEDGTHTWQYPDKELEK 235 (521)
T ss_pred eEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHH-hcCCcEEEEeecccccccccccCCCCHHHHHH
Confidence 7999999999999888763 2578998652 22222 1111111 2347787777764211 3467888887
Q ss_pred HhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhC--CcEEEecccccCcCCccCCCCCCCC--cEEEEcccc
Q 035915 245 YFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRN--SWHVLLDATALVVGEDRLNLALHRP--DFVLCNLDN 314 (344)
Q Consensus 245 ~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~--g~~vlvDAaQa~~G~~~LDLs~l~~--DFvv~S~HK 314 (344)
++++ +++++.+..-+| |.+++.+.+. .|+++ +++++.|=+-.-.......+-...+ -+++.|+=|
T Consensus 236 ~~~~-----~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK 310 (521)
T TIGR03801 236 LRDP-----SIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDDFRSLFAELPYNTIGVYSFSK 310 (521)
T ss_pred hcCC-----CCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcccccchhhhCCCCEEEEEcchh
Confidence 7654 356666543345 9999975443 24554 8999999875420111112211222 378889999
Q ss_pred CCCCCCC-ceEEEEEeCC
Q 035915 315 TQNAQPS-KITCLLIRKK 331 (344)
Q Consensus 315 ~l~G~P~-GiG~L~Vr~~ 331 (344)
. ||.|. .+|.++..++
T Consensus 311 ~-fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 311 Y-FGATGWRLGTIALHKD 327 (521)
T ss_pred h-ccCchhhhhhhhcCch
Confidence 9 88662 3898887654
No 284
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=97.68 E-value=0.00073 Score=68.31 Aligned_cols=190 Identities=12% Similarity=0.063 Sum_probs=113.0
Q ss_pred cccchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCC--CCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCC
Q 035915 131 RTQLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGL--PDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIG 208 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga--~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~e 208 (344)
.|.++.+.......-|..+.|.-..+.....++.++.|.|. ++++ +|.-|.||.+|+-....++ +.+||+|+.. |
T Consensus 48 fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~-eVlVT~GA~~ai~~~~~~l-~~~GDeVii~-e 124 (420)
T KOG0257|consen 48 FVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDD-EVLVTAGANEAISSALLGL-LNPGDEVIVF-E 124 (420)
T ss_pred HHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcc-cEEEecCchHHHHHHHHHH-cCCCCEEEEe-c
Confidence 44444444333332222223333444556677778887774 3433 7999999999998666665 5789996522 2
Q ss_pred cCHHHHHHHHHcCCcEEEEEeCC-------CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHH---HH
Q 035915 209 EELDYVREFASFKESKVILAPEA-------WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWI---SE 276 (344)
Q Consensus 209 H~~~~ir~la~~~G~kV~~vp~~-------~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~I---a~ 276 (344)
---++--...+-.|.+.+.+|.. ..+..+|.++|+..+++ +|+++.+..-+| |.+++=+++ ++
T Consensus 125 P~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~-----kTk~Ii~ntPhNPtGkvfsReeLe~ia~ 199 (420)
T KOG0257|consen 125 PFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITE-----KTKAIILNTPHNPTGKVFSREELERIAE 199 (420)
T ss_pred CcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccC-----CccEEEEeCCCCCcCcccCHHHHHHHHH
Confidence 00111111112247777777655 34556899999999986 467777665556 999887544 43
Q ss_pred -HHhCCcEEEecccccCc---CCccCCCCC----CCCcEEEEccccCCCCCCCc--eEEEEEeC
Q 035915 277 -AHRNSWHVLLDATALVV---GEDRLNLAL----HRPDFVLCNLDNTQNAQPSK--ITCLLIRK 330 (344)
Q Consensus 277 -ar~~g~~vlvDAaQa~~---G~~~LDLs~----l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~ 330 (344)
|+++|.+++.|=+=... |..-+.+.. ...-.-+.|+=|. || -+| +|-++..+
T Consensus 200 l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKt-f~-~TGWrlGW~igp~ 261 (420)
T KOG0257|consen 200 LCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKT-FG-VTGWRLGWAIGPK 261 (420)
T ss_pred HHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccce-ee-eeeeeeeeeechH
Confidence 58999999988653320 110011111 2245568899998 88 556 67666643
No 285
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=97.67 E-value=0.001 Score=66.83 Aligned_cols=148 Identities=11% Similarity=0.022 Sum_probs=82.4
Q ss_pred eEEEeCCHHHHHHHHHhhCC-C----CCC-CeEEE-cCCcC--H-HHHHHHHHcCCcEEEEEeCCCC---CCccCHHHHH
Q 035915 177 LVLFTPNYRDAMMLVGESYP-F----FRG-NFYMT-IIGEE--L-DYVREFASFKESKVILAPEAWL---DLRIKGSQLS 243 (344)
Q Consensus 177 ~VVFTsnaTeAlnlva~sl~-~----~~G-d~ivS-~~eH~--~-~~ir~la~~~G~kV~~vp~~~~---~g~i~~~~L~ 243 (344)
.++|++++|||+..++.... + .+| ..+++ .-.+| . ..+ .+....+....+.|.... ...-+.++|+
T Consensus 95 ~v~f~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 173 (395)
T PRK03715 95 KVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATM-SASGKPGWDTIFAPQVPGFPKAELNDIASVE 173 (395)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHH-hhcCCcccccCCCCCCCCceeeCCchHHHHH
Confidence 69999999999877655321 1 123 33443 33344 1 122 111111111111111100 0012467787
Q ss_pred HHhhhcCCCCCeeEEEEeCc-cc-ccccc----HHHHHH-HHhCCcEEEecccccCcCCcc----CCCCCCCCcEEEEcc
Q 035915 244 QYFRRKCKHTPKGLFSYPAD-IN-GTRYS----MHWISE-AHRNSWHVLLDATALVVGEDR----LNLALHRPDFVLCNL 312 (344)
Q Consensus 244 ~~l~~~~~~~~t~LVa~~av-SN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DFvv~S~ 312 (344)
+.+.+ .+..|.+..+ ++ |.+.| ++.+.+ |+++|+++++|-+|.-.|..- .+.-...||+++++
T Consensus 174 ~~l~~-----~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~t~g- 247 (395)
T PRK03715 174 KLITD-----KTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLG- 247 (395)
T ss_pred HHcCC-----CceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCceeeeh-
Confidence 77753 3556666544 44 88877 766654 689999999999997213221 12223469999886
Q ss_pred ccCCCCCCCceEEEEEeCCCc
Q 035915 313 DNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 313 HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
|. +|+-..+|+++++++..
T Consensus 248 -K~-lg~G~p~~av~~~~~i~ 266 (395)
T PRK03715 248 -KG-IGGGVPLAALLAKAEVA 266 (395)
T ss_pred -hh-hhCCcceEEEEEccccc
Confidence 87 66422388898888865
No 286
>PTZ00376 aspartate aminotransferase; Provisional
Probab=97.60 E-value=0.0011 Score=66.26 Aligned_cols=162 Identities=10% Similarity=-0.099 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHcC------CCCCCCeEEE--eCCHHHHHHHHHh---hCCCCCCCeEEE-cCCcCHHHHHHHHHcCCcEE
Q 035915 158 EIQARNKVLKHCG------LPDDEYLVLF--TPNYRDAMMLVGE---SYPFFRGNFYMT-IIGEELDYVREFASFKESKV 225 (344)
Q Consensus 158 le~AR~~IA~~Lg------a~p~ey~VVF--TsnaTeAlnlva~---sl~~~~Gd~ivS-~~eH~~~~ir~la~~~G~kV 225 (344)
+.+.|+.|++++. ++++ +|++ |.|+++|+.++.. .+ ..+||.++. .-.++ .....++..|+++
T Consensus 74 ~~~lR~aia~~~~~~~~~~~~~~--~v~~~~t~G~~~al~~~~~~l~~~-~~~Gd~Vlv~~P~y~--~~~~~~~~~G~~~ 148 (404)
T PTZ00376 74 LQSFIEAAQKLLFGEASYALAEK--RIATVQALSGTGALRLGFEFLKRF-LPAGTTVYVSNPTWP--NHVNIFKSAGLNV 148 (404)
T ss_pred CHHHHHHHHHHhcCCCccccccC--eEEEeeccCcchHHHHHHHHHHHh-cCCCCEEEEcCCCch--hHHHHHHHcCCce
Confidence 4568888888752 3444 6885 8999999987764 34 468998652 22222 1234456679999
Q ss_pred EEEeCCC-CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcCCcc-
Q 035915 226 ILAPEAW-LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVGEDR- 297 (344)
Q Consensus 226 ~~vp~~~-~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~~~- 297 (344)
+.+|... .+..++.+.+++.+... ..+++++.++.-+| |..++.+.+. .|++++++++.|-+=.-.-...
T Consensus 149 ~~v~l~~~~~~~~d~~~l~~~~~~~--~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~ 226 (404)
T PTZ00376 149 KEYRYYDPKTKGLDFDGMLEDLRTA--PNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDL 226 (404)
T ss_pred eeccccCcccCCcCHHHHHHHHHhC--CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCH
Confidence 9998732 23457888888887531 12356666665556 9999986553 3578999999998743100000
Q ss_pred -------CCCCCCC-CcEEEEccccCCCCCCC-ceEEEE
Q 035915 298 -------LNLALHR-PDFVLCNLDNTQNAQPS-KITCLL 327 (344)
Q Consensus 298 -------LDLs~l~-~DFvv~S~HK~l~G~P~-GiG~L~ 327 (344)
..+.... -=+++.|+=|. |+.|. .+|.++
T Consensus 227 ~~~~~~~~~~~~~~~~vi~i~SfSK~-~~~~GlRvG~~~ 264 (404)
T PTZ00376 227 DKDAYAIRLFAERGVEFLVAQSFSKN-MGLYGERIGALH 264 (404)
T ss_pred HHHHHHHHHHHhcCCcEEEEEeCCCc-ccccccccceEE
Confidence 1111111 12888999999 88552 488874
No 287
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=97.58 E-value=0.0019 Score=67.87 Aligned_cols=164 Identities=15% Similarity=0.038 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEE-eCCCC-
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILA-PEAWL- 233 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~v-p~~~~- 233 (344)
..+.+|.+.+|+.+|++. .-..+.|+|.|+..+..+. ..+||.|+-.-.-|......+.- .|+.=+++ |...+
T Consensus 70 G~i~eAqe~aA~~fgAd~---tyFvvNGTS~ank~vi~a~-~~~GD~VLvdRN~HKSi~~glil-aGa~Pvyl~p~~np~ 144 (557)
T COG1982 70 GPIKEAQELAARVFGADH---TYFVVNGTSTANKAVINAV-LTPGDKVLVDRNCHKSIHHGLIL-AGATPVYLEPSRNPL 144 (557)
T ss_pred ccHHHHHHHHHHHhCCCc---eEEEECCccHHHHHHHHhh-cCCCCEEEecCCccHHHHHHHHH-cCCceEEecCCCCcc
Confidence 357889999999999963 3566688888888888876 57899987665544221222222 36665554 32211
Q ss_pred ---CCccCHHHHHHHhhhcCCCCCe-eEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCCccCC----CC-
Q 035915 234 ---DLRIKGSQLSQYFRRKCKHTPK-GLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLN----LA- 301 (344)
Q Consensus 234 ---~g~i~~~~L~~~l~~~~~~~~t-~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LD----Ls- 301 (344)
-+.|+.+.+.+.+.+.. .. +++.++ ..| |+.+++++|.+ ++..++++++|-+|-+ -...-+ ..
T Consensus 145 ~gi~ggI~~~~~~~~l~~~~---~~~k~~vit-npTYdGv~~n~~~i~~~~~~~~a~v~~deah~~-~~~~~~~l~~~~~ 219 (557)
T COG1982 145 YGIIGGIPLETFKEALLAHP---DAEKLAVIT-NPTYDGVCYNLRKIVELLHHYGAWVLYDEAHPA-HFDFSPMLPESAL 219 (557)
T ss_pred ccccCCCCHHHHHHHHHhCh---hhheeEEEe-cCccceEeecHHHHHHHHhhcCceEEhhhcCcc-cccccccCcchhh
Confidence 24578888887765431 23 556655 334 99999987764 6889999999999876 322211 11
Q ss_pred CCCCcEEEEccccCCCCCCCceEEEEEeC
Q 035915 302 LHRPDFVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 302 ~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
+.+.||++=|.||. +++=+-...|-++.
T Consensus 220 ~~~~~~~tqS~HK~-l~alSQaS~iHv~~ 247 (557)
T COG1982 220 NGGADFVTQSTHKL-LAALSQASMIHVKD 247 (557)
T ss_pred hcCceEEEechhhh-hhhhhhhHHHhhCC
Confidence 25799999999998 66555555666664
No 288
>PLN02624 ornithine-delta-aminotransferase
Probab=97.55 E-value=0.0023 Score=65.90 Aligned_cols=164 Identities=10% Similarity=0.089 Sum_probs=96.0
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---hCCC-C----CCC-eEEEcCC-cC--HHHHHHHH----
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGE---SYPF-F----RGN-FYMTIIG-EE--LDYVREFA---- 218 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~---sl~~-~----~Gd-~ivS~~e-H~--~~~ir~la---- 218 (344)
.....+.-++++++++. + .+.|+.+++||+..++. .+.. . ++. .+++..+ +| ......+.
T Consensus 116 ~~~~~~la~~L~~~~~~--~--~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~ 191 (474)
T PLN02624 116 NDKFPEFAEYLTSMFGY--D--MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNE 191 (474)
T ss_pred CHHHHHHHHHHHhhcCC--C--eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCcc
Confidence 34556667778888764 2 69999999998765543 2100 1 133 3444322 33 11111110
Q ss_pred HcCC-----cEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc----HHHHHH-HHhCCcEEEe
Q 035915 219 SFKE-----SKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS----MHWISE-AHRNSWHVLL 286 (344)
Q Consensus 219 ~~~G-----~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P----l~~Ia~-ar~~g~~vlv 286 (344)
...+ ..+..+|.+ +.+.|++.+... ..++..|.+..+.| |.++| ++.|.+ |+++|+++++
T Consensus 192 ~~~~~~~~~~~~~~~~~~------d~~~l~~~l~~~--~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~ 263 (474)
T PLN02624 192 ATRGFGPLLPGHLKVDFG------DLDALEKIFEED--GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIA 263 (474)
T ss_pred ccccCCCCCCCceEeCCC------CHHHHHHHHHhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 0011 112233332 456788888532 13466666654443 99999 766654 6899999999
Q ss_pred ccccc-CcCC----ccCCCCCCCCcEEEEccccCCCCCC-CceEEEEEeCCCcc
Q 035915 287 DATAL-VVGE----DRLNLALHRPDFVLCNLDNTQNAQP-SKITCLLIRKKSFD 334 (344)
Q Consensus 287 DAaQa-~~G~----~~LDLs~l~~DFvv~S~HK~l~G~P-~GiG~L~Vr~~~~~ 334 (344)
|-+|. + |. ...+.....+|++++| |- +|+. -.+|++++++++.+
T Consensus 264 DEv~tG~-GrtG~~~a~~~~~i~pDiv~ls--K~-lggG~~pigav~~~~~i~~ 313 (474)
T PLN02624 264 DEIQTGL-ARTGKMLACDWEEVRPDVVILG--KA-LGGGVIPVSAVLADKDVML 313 (474)
T ss_pred eccccCc-CcCcchhhHHhcCCCCCEEEec--cc-ccCCCCcceeeeecHHHHh
Confidence 99998 4 42 1234445679999997 98 6654 34888888865543
No 289
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=97.50 E-value=0.0044 Score=62.23 Aligned_cols=191 Identities=15% Similarity=0.082 Sum_probs=119.0
Q ss_pred cCCCCCCcccccchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCC
Q 035915 122 FGSNLPDLDRTQLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGN 201 (344)
Q Consensus 122 ~Ga~lp~~s~v~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd 201 (344)
|.++ |. .+++..+++..-.+|-+. ...+.++....-..+--+-......|+|+++.--++.++++.+. ++||
T Consensus 37 f~~p-p~--i~~Al~~rvdhGvfGY~~----~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T-~~gd 108 (388)
T COG1168 37 FPTP-PE--IIEALRERVDHGVFGYPY----GSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALT-KPGD 108 (388)
T ss_pred CCCC-HH--HHHHHHHHHhcCCCCCCC----CCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhC-cCCC
Confidence 4454 43 333444444444455441 11123355555555544443222269999999999999999985 6888
Q ss_pred eEE--EcCCcC-HHHHHHHHHcCCcEEEEEeCCCCCCcc--CHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHH
Q 035915 202 FYM--TIIGEE-LDYVREFASFKESKVILAPEAWLDLRI--KGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWI 274 (344)
Q Consensus 202 ~iv--S~~eH~-~~~ir~la~~~G~kV~~vp~~~~~g~i--~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~I 274 (344)
.|+ ++.-++ .+. -+..|-++...|.-..+++. |.++|++.|... +++|+.+..-.| |++..-+++
T Consensus 109 ~Vvi~tPvY~PF~~~----i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~----~vkl~iLCnPHNP~Grvwt~eeL 180 (388)
T COG1168 109 GVVIQTPVYPPFYNA----IKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDE----RVKLFILCNPHNPTGRVWTKEEL 180 (388)
T ss_pred eeEecCCCchHHHHH----HhhcCcEEEeccccccCCcEEecHHHHHHHHhcC----CccEEEEeCCCCCCCccccHHHH
Confidence 853 555444 333 24468889888876555655 999999998752 456666654445 999888655
Q ss_pred H----HHHhCCcEEEecccccCc---CCccCCCCCCC-----CcEEEEccccCCCCCCCceE--EEEEeC
Q 035915 275 S----EAHRNSWHVLLDATALVV---GEDRLNLALHR-----PDFVLCNLDNTQNAQPSKIT--CLLIRK 330 (344)
Q Consensus 275 a----~ar~~g~~vlvDAaQa~~---G~~~LDLs~l~-----~DFvv~S~HK~l~G~P~GiG--~L~Vr~ 330 (344)
. .|+++|+.|+.|=.|+-. |+..+.+..+. --+.+.|.-|. |.-| |+. .+++.+
T Consensus 181 ~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKt-FNla-GL~~a~~Ii~n 248 (388)
T COG1168 181 RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKT-FNLA-GLKCAYIIISN 248 (388)
T ss_pred HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeecccc-ccch-hhhheeEEecC
Confidence 4 358999999999999832 43333333222 33677777998 7755 544 444444
No 290
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=97.48 E-value=0.0055 Score=61.02 Aligned_cols=165 Identities=12% Similarity=0.021 Sum_probs=95.7
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC--------CCCCC-eEEEcC-CcCHHHHHHHHH-----
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP--------FFRGN-FYMTII-GEELDYVREFAS----- 219 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~--------~~~Gd-~ivS~~-eH~~~~ir~la~----- 219 (344)
.....+..+++++++|. + .++|++++++|+..+..... ...|+ .|++.- .||-..+..+..
T Consensus 78 ~~~~~~l~~~l~~~~~~--~--~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~ 153 (401)
T TIGR01885 78 NDVFGEFAEYVTKLFGY--D--KVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPD 153 (401)
T ss_pred CHHHHHHHHHHHhhcCC--C--EEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcc
Confidence 44567778889999874 2 69999999999877665421 11333 455443 345111111111
Q ss_pred ---cCC---cEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEe-Cccc-ccccc----HHHHHH-HHhCCcEEEe
Q 035915 220 ---FKE---SKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYP-ADIN-GTRYS----MHWISE-AHRNSWHVLL 286 (344)
Q Consensus 220 ---~~G---~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~-avSN-G~i~P----l~~Ia~-ar~~g~~vlv 286 (344)
..+ ..+..+|.+ +.++|++.+... ..+...|.+- ..++ |.+.| ++.|.+ ++++|+++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~------d~~~le~~l~~~--~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~ 225 (401)
T TIGR01885 154 SRTNFGPYVPGFKKIPYN------NLEALEEALEDH--GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIA 225 (401)
T ss_pred cccccCCCCCCceEeCCC------CHHHHHHHHHhc--CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 011 112223321 457788877532 1234455553 3343 99998 766654 6899999999
Q ss_pred cccccCcCCc--c--CCCCCCCCcEEEEccccCCCCCC-CceEEEEEeCCCcc
Q 035915 287 DATALVVGED--R--LNLALHRPDFVLCNLDNTQNAQP-SKITCLLIRKKSFD 334 (344)
Q Consensus 287 DAaQa~~G~~--~--LDLs~l~~DFvv~S~HK~l~G~P-~GiG~L~Vr~~~~~ 334 (344)
|-+|.-.|.. . ++...+.+|+++++ |. +++. --+|+++.++++.+
T Consensus 226 DEv~~g~g~~G~~~~~~~~~~~~di~~~g--K~-l~~g~~~ig~v~~~~~i~~ 275 (401)
T TIGR01885 226 DEIQTGLGRTGKLLCVDHENVKPDIVLLG--KA-LSGGVYPVSAVLADDDVML 275 (401)
T ss_pred echhhCCCccchhhHHhhcCCCCCEEEee--cc-ccCCCCCcEEEEEcHHHHh
Confidence 9998521311 1 22334679999887 98 6642 12788887766543
No 291
>PRK09275 aspartate aminotransferase; Provisional
Probab=97.46 E-value=0.0025 Score=66.90 Aligned_cols=147 Identities=10% Similarity=0.015 Sum_probs=90.3
Q ss_pred CeEEEeCCHHHHHHHHHhhC----CCCCCCeEEEc-CCcCHHHHHHHHHc--CCcEEEEEeCCCC-CCccCHHHHHHHhh
Q 035915 176 YLVLFTPNYRDAMMLVGESY----PFFRGNFYMTI-IGEELDYVREFASF--KESKVILAPEAWL-DLRIKGSQLSQYFR 247 (344)
Q Consensus 176 y~VVFTsnaTeAlnlva~sl----~~~~Gd~ivS~-~eH~~~~ir~la~~--~G~kV~~vp~~~~-~g~i~~~~L~~~l~ 247 (344)
.+|+.|+|+|+|+..+..++ -+.+||+|+.. -.+. . ....++- .|++++.++.+.. +-.++.++|+++++
T Consensus 162 ~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~-~-Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~ 239 (527)
T PRK09275 162 FDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFT-P-YLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD 239 (527)
T ss_pred CeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChH-H-HHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC
Confidence 37999999999999888763 25789986532 2222 1 1222222 2556666654322 23578888988776
Q ss_pred hcCCCCCeeEEEEeCccc--cccccHHHHH----HHH--hCCcEEEecccccCcCCccCCCCCC--CCcEEEEccccCCC
Q 035915 248 RKCKHTPKGLFSYPADIN--GTRYSMHWIS----EAH--RNSWHVLLDATALVVGEDRLNLALH--RPDFVLCNLDNTQN 317 (344)
Q Consensus 248 ~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia----~ar--~~g~~vlvDAaQa~~G~~~LDLs~l--~~DFvv~S~HK~l~ 317 (344)
+ +++++.+..-+| |.+++-+.+. .|+ +++++++.|-+-.-.......+... .--+++.|+=|. |
T Consensus 240 ~-----~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~~~s~~~~~~~~~I~v~SfSK~-f 313 (527)
T PRK09275 240 P-----SIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDDFRSLFAVLPYNTILVYSFSKY-F 313 (527)
T ss_pred C-----CCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcccccCHHHhCCCCEEEEeehhhh-c
Confidence 4 356666554455 9999975443 243 3599999998754211011111111 124778899999 8
Q ss_pred CCCCc--eEEEEEeCC
Q 035915 318 AQPSK--ITCLLIRKK 331 (344)
Q Consensus 318 G~P~G--iG~L~Vr~~ 331 (344)
|.| | +|.++..++
T Consensus 314 ~mt-G~RlG~i~~~~~ 328 (527)
T PRK09275 314 GAT-GWRLGVIALHED 328 (527)
T ss_pred cCc-HhHHhhhhcCch
Confidence 866 5 798887765
No 292
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.44 E-value=0.0053 Score=62.34 Aligned_cols=149 Identities=12% Similarity=0.020 Sum_probs=98.6
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCC-cC--HHHHHHHHHcCCcEEEEEeCCCCCCc
Q 035915 160 QARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIG-EE--LDYVREFASFKESKVILAPEAWLDLR 236 (344)
Q Consensus 160 ~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~e-H~--~~~ir~la~~~G~kV~~vp~~~~~g~ 236 (344)
..-++++.+=|+.. .++|-| +-.|+..+..++ +++||+++..-+ +. ......+.++.|++|.+++...
T Consensus 67 ~lE~~~a~LEg~~~---~~afsS-GmaAI~~~~l~l-l~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~---- 137 (396)
T COG0626 67 ALEEALAELEGGED---AFAFSS-GMAAISTALLAL-LKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGD---- 137 (396)
T ss_pred HHHHHHHHhhCCCc---EEEecC-cHHHHHHHHHHh-cCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCC----
Confidence 34445666667741 355554 455777666555 567999764333 33 2233445567899999876432
Q ss_pred cCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH-HHhCCcEEEecccccCcCC--ccCCCCCCCCcEEEEc
Q 035915 237 IKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE-AHRNSWHVLLDATALVVGE--DRLNLALHRPDFVLCN 311 (344)
Q Consensus 237 i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~--~~LDLs~l~~DFvv~S 311 (344)
.+.+.+.+.+ .+|++|-+-.-+| -.++||..|++ +|++|+.++||-+=+- |. .||+ +++|+++=|
T Consensus 138 --~~~~~~~~~~----~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfat-P~~q~PL~---~GaDIVvhS 207 (396)
T COG0626 138 --DEALEAAIKE----PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFAT-PVLQRPLE---LGADIVVHS 207 (396)
T ss_pred --hHHHHHHhcc----cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEECCccc-ccccChhh---cCCCEEEEe
Confidence 2345555542 1478888877777 99999988865 6999999999999886 43 3444 579999999
Q ss_pred cccCCCCCCCc-eEEEEE
Q 035915 312 LDNTQNAQPSK-ITCLLI 328 (344)
Q Consensus 312 ~HK~l~G~P~G-iG~L~V 328 (344)
+=|. ++|=.. +|.+++
T Consensus 208 aTKy-l~GHsDvl~G~v~ 224 (396)
T COG0626 208 ATKY-LGGHSDVLGGVVL 224 (396)
T ss_pred cccc-ccCCcceeeeEEe
Confidence 9999 775432 455555
No 293
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.38 E-value=0.0018 Score=65.28 Aligned_cols=171 Identities=12% Similarity=0.048 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---hCC---CCCCC-eEEE-cCCcC--HHHHHHHHHcC----
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGE---SYP---FFRGN-FYMT-IIGEE--LDYVREFASFK---- 221 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~---sl~---~~~Gd-~ivS-~~eH~--~~~ir~la~~~---- 221 (344)
....+..+++++.+... ...|.|+.++|||+..+.. .+. -..|. .|++ .-.+| ......+....
T Consensus 85 ~~~~~la~~l~~~~p~~--~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~ 162 (423)
T PRK05964 85 EPAERLAQRLVALTPGG--LDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHA 162 (423)
T ss_pred HHHHHHHHHHHHhCCCC--CCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccc
Confidence 33445566677776422 1279999999998775443 221 01233 4553 33344 22221111100
Q ss_pred ---C--cEEEEEeCCCCC-CccCHHHHHHHhhhcCCCCCee-EEEEeC-ccc-ccccc----HHHHH-HHHhCCcEEEec
Q 035915 222 ---E--SKVILAPEAWLD-LRIKGSQLSQYFRRKCKHTPKG-LFSYPA-DIN-GTRYS----MHWIS-EAHRNSWHVLLD 287 (344)
Q Consensus 222 ---G--~kV~~vp~~~~~-g~i~~~~L~~~l~~~~~~~~t~-LVa~~a-vSN-G~i~P----l~~Ia-~ar~~g~~vlvD 287 (344)
+ ..+..+|....+ ...+.+.|++.+... ..+.. ++.-+. +.+ |.+.| ++.+. .|+++|+++++|
T Consensus 163 ~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~--~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~D 240 (423)
T PRK05964 163 LYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH--AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFD 240 (423)
T ss_pred cccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC--CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe
Confidence 0 112334432211 111256677777532 12343 444453 334 77775 44444 368999999999
Q ss_pred cccc-CcCCc----cCCCCCCCCcEEEEccccCCCCCC-CceEEEEEeCCCcc
Q 035915 288 ATAL-VVGED----RLNLALHRPDFVLCNLDNTQNAQP-SKITCLLIRKKSFD 334 (344)
Q Consensus 288 AaQa-~~G~~----~LDLs~l~~DFvv~S~HK~l~G~P-~GiG~L~Vr~~~~~ 334 (344)
-+|. + |.. ..+.....||+++++ |+ +++. -.+|+++.+++..+
T Consensus 241 Ev~tg~-gr~G~~~a~~~~~v~pDi~~~~--K~-l~gG~~p~~av~~~~~i~~ 289 (423)
T PRK05964 241 EIATGF-GRTGTLFACEQAGVSPDIMCLS--KG-LTGGYLPLAATLCTAEIFE 289 (423)
T ss_pred chhhCC-CcCcchhHHHhcCCCCCeeeee--hh-hhcCcccceEEEEcHHHHH
Confidence 9996 3 421 113334679999887 99 6554 35888888877554
No 294
>PLN02672 methionine S-methyltransferase
Probab=97.33 E-value=0.0048 Score=69.52 Aligned_cols=167 Identities=13% Similarity=0.074 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHcCCCCC-CCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-CCcCHHHHHHHHHcCCcEEEEEeCCC-CC
Q 035915 158 EIQARNKVLKHCGLPDD-EYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI-IGEELDYVREFASFKESKVILAPEAW-LD 234 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~-ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~-~eH~~~~ir~la~~~G~kV~~vp~~~-~~ 234 (344)
.+..++.+++..|++.+ +.+|++|+|+++++.++..++ ..+||.++.. -.+. .....++..|++++.+|.+. .+
T Consensus 736 r~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aL-l~pGD~VLVp~PtY~--~Y~~~a~~~Ga~vv~Vpl~~e~g 812 (1082)
T PLN02672 736 RPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCC-VQEGGTLCFPAGSNG--TYVSAAKFLKANFRRIPTKSSDG 812 (1082)
T ss_pred HHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHH-cCCCCEEEEeCCChH--HHHHHHHHcCCEEEEEecccccC
Confidence 46677888888888653 237999999999999888877 3689986532 2222 12334556799999999863 23
Q ss_pred CccCHHHHHHHhhhcCCCCCeeE-EEEeCcc-ccccccHHHHHH----HHhCCcEEEecccccCc---CCc--cCCCC--
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGL-FSYPADI-NGTRYSMHWISE----AHRNSWHVLLDATALVV---GED--RLNLA-- 301 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~L-Va~~avS-NG~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~---G~~--~LDLs-- 301 (344)
-.++.++|++++++.. +..+ ++.|..| +|.+++.+++.+ |+++++++++|-+.+-. +.. ..++.
T Consensus 813 f~lD~d~Le~al~~~~---~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~ 889 (1082)
T PLN02672 813 FKLTAKTLASTLETVK---KPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSI 889 (1082)
T ss_pred CCCCHHHHHHHhccCC---CCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhH
Confidence 4677888988885421 1223 3334323 399999966543 47889999999988620 211 11111
Q ss_pred --CCC---C---cEEEEccccCCCCCCC-ceEEEEEeCC
Q 035915 302 --LHR---P---DFVLCNLDNTQNAQPS-KITCLLIRKK 331 (344)
Q Consensus 302 --~l~---~---DFvv~S~HK~l~G~P~-GiG~L~Vr~~ 331 (344)
... . =+++.|+=|. |+.|. .+|.++..+.
T Consensus 890 l~~~~~~sks~nVIvL~SfSKk-f~lpGLRIGylIap~~ 927 (1082)
T PLN02672 890 LSRLKSSNPSFAVALLGGLSTE-LLSGGHEFGFLALNDS 927 (1082)
T ss_pred HHHhccccCCceEEEEeCcHHh-hccHHHHheeEEeCCH
Confidence 111 1 1455688887 77663 3899988544
No 295
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=97.29 E-value=0.0014 Score=66.78 Aligned_cols=195 Identities=16% Similarity=0.136 Sum_probs=120.5
Q ss_pred ccccchHHHHHHhhccC-CCC---hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHH----h-hCCC--C
Q 035915 130 DRTQLEPSRLLDILTKK-SSF---PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVG----E-SYPF--F 198 (344)
Q Consensus 130 s~v~~~~~~L~~~L~gn-ss~---~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva----~-sl~~--~ 198 (344)
+.+..+...+.+..+.| -.| +.--. +.++.-.+.-+..|-+.. -+=+|++|++-+..-+. . .+|- .
T Consensus 113 D~~~Lag~wlT~t~Ntn~~TYEiAPvF~l--mE~~vl~km~~ivGw~~~-~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~ 189 (510)
T KOG0629|consen 113 DPIGLAGEWLTSTANTNMFTYEIAPVFVL--MEEEVLAKMREIVGWEEG-GDGIFAPGGSISNMYAMNCARYKNFPEVKT 189 (510)
T ss_pred CHHHHHHHHHHhccCCCCceEEecceEEe--ehHHHHHHHHHHhCCCCC-CCceecCCchhHHHHHHHHHHhhcCchhhh
Confidence 35667777777765555 122 11111 234445555566677653 24599998887643222 1 1231 1
Q ss_pred CCC-----eEE-EcCCcCHHHHHHHHHcCC---cEEEEEeCCCCCCccCHHHHHHHhhhc-CCCCCeeEEEEeCccc--c
Q 035915 199 RGN-----FYM-TIIGEELDYVREFASFKE---SKVILAPEAWLDLRIKGSQLSQYFRRK-CKHTPKGLFSYPADIN--G 266 (344)
Q Consensus 199 ~Gd-----~iv-S~~eH~~~~ir~la~~~G---~kV~~vp~~~~~g~i~~~~L~~~l~~~-~~~~~t~LVa~~avSN--G 266 (344)
.|- -++ ++-+-| -.+...|+-.| -.++.++.+. .|.+..++|++.+-.. .+...+-+|+.++-++ |
T Consensus 190 ~Gm~~~p~lilFtSeesH-YSi~kaAa~lg~gtd~c~~v~t~e-~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~G 267 (510)
T KOG0629|consen 190 KGMFALPPLILFTSEESH-YSIKKAAAFLGLGTDHCIKVKTDE-RGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLG 267 (510)
T ss_pred hhhhcCCcEEEEecccch-hhHHHHHHHhccCCceeEEecccc-cCccchHHHHHHHHHHHhcCCCCeEEEecCCceeee
Confidence 222 233 332222 22444444344 4677788876 5899999999887532 1112245777777666 9
Q ss_pred ccccHHHHHH-HHhCCcEEEecccccCcCCccCC------CCC-CCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 267 TRYSMHWISE-AHRNSWHVLLDATALVVGEDRLN------LAL-HRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 267 ~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LD------Ls~-l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
..=||+.|+. |++++.++|||||-.- |.. +. |+- -++|-++.++||+ .|+|--+++++.|.+-
T Consensus 268 AFDdL~~iadiC~k~~lWmHvDAAwGG-glL-mS~k~R~kl~Giera~SvtwnpHK~-~gaplqCsa~l~r~~g 338 (510)
T KOG0629|consen 268 AFDDLNGIADICEKHKLWMHVDAAWGG-GLL-MSRKHRHKLTGIERANSVTWNPHKL-MGAPLQCSAFLTREEG 338 (510)
T ss_pred ccCcHHHHHHHHHhcCEEEEeeccccc-ccc-cChhhHhhccCccccCceeecHHHh-hcCcchhhHHHHHHHH
Confidence 9999988875 6889999999997654 322 22 111 3689999999999 9999999998888654
No 296
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=97.27 E-value=0.0047 Score=60.87 Aligned_cols=164 Identities=10% Similarity=-0.015 Sum_probs=91.8
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC-CCCCCCeEEE-cCCcCHHHHHHH--HHc----C--CcEEEEE
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY-PFFRGNFYMT-IIGEELDYVREF--ASF----K--ESKVILA 228 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl-~~~~Gd~ivS-~~eH~~~~ir~l--a~~----~--G~kV~~v 228 (344)
.+.+..+++.|+..++ ..++|++++|||+..+.... .+..++.+++ ...+|-..+..+ ... . +..+..+
T Consensus 69 ~~~~~~la~~l~~~~~-~~~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (375)
T PRK04260 69 NSLQEEVAQKLIGDKD-YLAFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHF 147 (375)
T ss_pred CHHHHHHHHHHhcCcC-CEEEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCe
Confidence 4567778876644433 24789999999988655432 1233455553 444441111111 100 0 1111001
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc----HHHHH-HHHhCCcEEEecccccCcCCcc--C-
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS----MHWIS-EAHRNSWHVLLDATALVVGEDR--L- 298 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P----l~~Ia-~ar~~g~~vlvDAaQa~~G~~~--L- 298 (344)
+... .-+.+.+++.+.+ ++.+|.+..++| |++.| ++.+. .++++|+++++|.+|.-.|... +
T Consensus 148 ~~~~---~~dl~~l~~~l~~-----~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~ 219 (375)
T PRK04260 148 SYAI---FNDLNSVKALVNK-----NTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYA 219 (375)
T ss_pred EEeC---CCCHHHHHHhcCC-----CeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhh
Confidence 1000 1256777777643 356777765553 88876 55554 4688999999999985213221 1
Q ss_pred -CCCCCCCcEEEEccccCCCCCC-CceEEEEEeCCCccc
Q 035915 299 -NLALHRPDFVLCNLDNTQNAQP-SKITCLLIRKKSFDT 335 (344)
Q Consensus 299 -DLs~l~~DFvv~S~HK~l~G~P-~GiG~L~Vr~~~~~~ 335 (344)
....+.+|.+ ++-|. ++ | --+|+++++++..+.
T Consensus 220 ~~~~~~~pdi~--t~sK~-l~-~G~~ig~~~~~~~~~~~ 254 (375)
T PRK04260 220 FEHYGIEPDIF--TLAKG-LA-NGVPVGAMLAKSSLGGA 254 (375)
T ss_pred hHhhCCCCCEE--Eeccc-cc-CCcceEEEEEcHHHHhh
Confidence 1234678965 67898 76 3 128999998765543
No 297
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=97.25 E-value=0.012 Score=58.60 Aligned_cols=158 Identities=9% Similarity=0.011 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh---CCC---CCCC-eEE-EcCCcC-H-HHHHHHH------H--
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES---YPF---FRGN-FYM-TIIGEE-L-DYVREFA------S-- 219 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s---l~~---~~Gd-~iv-S~~eH~-~-~~ir~la------~-- 219 (344)
..+.-++++++++. + .+.|+.+++||+..+..- +.. ..+. .++ ..-.+| . .....+. .
T Consensus 84 ~~~l~~~l~~~~~~--~--~~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~ 159 (403)
T PRK05093 84 ALRLAKKLIDATFA--E--RVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGF 159 (403)
T ss_pred HHHHHHHHHhhCCC--C--EEEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcC
Confidence 34666777777654 2 699999999987665442 210 1222 343 333344 1 1111110 0
Q ss_pred -cCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEe-Cccc-ccccc----HHHHH-HHHhCCcEEEeccccc
Q 035915 220 -FKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYP-ADIN-GTRYS----MHWIS-EAHRNSWHVLLDATAL 291 (344)
Q Consensus 220 -~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~-avSN-G~i~P----l~~Ia-~ar~~g~~vlvDAaQa 291 (344)
.....+..+|.+ |.+++++.+.+ +++.|.+. ..++ |.+.| ++.|. .|+++|+++++|=+|.
T Consensus 160 ~~~~~~~~~~~~~------d~~~l~~~l~~-----~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~ 228 (403)
T PRK05093 160 GPKPADITHVPFN------DLAAVKAVIDD-----HTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQT 228 (403)
T ss_pred CCCCCCcEEeCCC------CHHHHHHHhcC-----CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 001123333332 45778877753 35555554 3334 55433 44444 4689999999999987
Q ss_pred CcCCcc----CCCCCCCCcEEEEccccCCCCCCCc--eEEEEEeCCCccc
Q 035915 292 VVGEDR----LNLALHRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFDT 335 (344)
Q Consensus 292 ~~G~~~----LDLs~l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~~ 335 (344)
-.|... .......+|++++| |. ++ | | +|+++.++++.+.
T Consensus 229 g~g~~g~~~~~~~~~~~pdi~s~s--K~-l~-~-G~rig~vv~~~~i~~~ 273 (403)
T PRK05093 229 GMGRTGDLFAYMHYGVTPDILTSA--KA-LG-G-GFPIGAMLTTAEIASH 273 (403)
T ss_pred CCCCCccchhhhhcCCCCCEEEec--cc-cc-C-CcceEEEEEcHHHHhh
Confidence 214321 12234568987765 98 76 5 6 9999988776443
No 298
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=97.24 E-value=0.0039 Score=61.19 Aligned_cols=158 Identities=9% Similarity=-0.005 Sum_probs=86.0
Q ss_pred HHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC-CCCCCCeEE-EcCCcC---HHHHHHHHHcCCc---------EEE
Q 035915 161 ARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY-PFFRGNFYM-TIIGEE---LDYVREFASFKES---------KVI 226 (344)
Q Consensus 161 AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl-~~~~Gd~iv-S~~eH~---~~~ir~la~~~G~---------kV~ 226 (344)
.+..+++.++.......++|++++++|+..+.... .+..++.++ ..-.+| ...+. +...... .+.
T Consensus 72 ~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~-~~~~~~~~~~~~~~~~~~~ 150 (377)
T PRK02936 72 LQEEVASLLAENSAGDLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMS-ATGQEKIKEGFGPLLPGFT 150 (377)
T ss_pred HHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhh-ccCCccccccCCCCCCCce
Confidence 44455555543211116999999999988776632 122224454 333444 12222 1100000 112
Q ss_pred EEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--ccccc----HHHHH-HHHhCCcEEEecccccCcCCc--c
Q 035915 227 LAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYS----MHWIS-EAHRNSWHVLLDATALVVGED--R 297 (344)
Q Consensus 227 ~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~P----l~~Ia-~ar~~g~~vlvDAaQa~~G~~--~ 297 (344)
.+|.+ +.++|++.+.+ +++.|.+..+.+ |...+ ++.|. .|+++|+++++|-+|.-.|.. .
T Consensus 151 ~~~~~------d~~~l~~~~~~-----~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~ 219 (377)
T PRK02936 151 HVPFN------DIKALKEVMNE-----EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTL 219 (377)
T ss_pred EeCCC------CHHHHHHhccC-----CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh
Confidence 22221 46778877754 366777755443 55533 55554 368999999999998621321 1
Q ss_pred CC--CCCCCCcEEEEccccCCCCCCCc--eEEEEEeCCCccc
Q 035915 298 LN--LALHRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFDT 335 (344)
Q Consensus 298 LD--Ls~l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~~ 335 (344)
+. .....+|.+ ++-|. ++ + | +|+++.+++..+.
T Consensus 220 ~~~~~~~~~~di~--t~sK~-l~-~-G~~ig~v~~~~~~~~~ 256 (377)
T PRK02936 220 FAYEQFGLDPDIV--TVAKG-LG-N-GIPVGAMIGKKELGTA 256 (377)
T ss_pred hHHHhhCCCCcEE--EEccc-cc-C-CCccEEEEEcHHHHhh
Confidence 11 123457865 56898 77 4 5 8888887765543
No 299
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.12 E-value=0.0096 Score=61.04 Aligned_cols=157 Identities=11% Similarity=0.040 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHH---HHHHHHhhCCCCCCCe-EEEcCCcC--HHHHHHHHHcCCcEEEEEeC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRD---AMMLVGESYPFFRGNF-YMTIIGEE--LDYVREFASFKESKVILAPE 230 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTe---Alnlva~sl~~~~Gd~-ivS~~eH~--~~~ir~la~~~G~kV~~vp~ 230 (344)
.+-+-...|+++.|.+-. +.-+-.++|. |+.++.+... ++++. +++..-|+ ...++..+...|++|+.+|.
T Consensus 111 ~lfe~Qs~i~eLTGmdva--NaSlyd~atA~aEa~~ma~r~~~-~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~ 187 (429)
T PF02347_consen 111 ALFEYQSMICELTGMDVA--NASLYDGATAAAEAMLMAVRATK-RKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPL 187 (429)
T ss_dssp HHHHHHHHHHHHHTSSEE---SEBSSCCHHHHHHHHHHHHHHT-T---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-B
T ss_pred HHHHHHHHHHHhhCCCcc--CCCCCChhHHHHHHHHHHHHhcc-cCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecc
Confidence 467888999999998521 1122246665 4444443322 22345 55666677 33456667778999999998
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-cccccHHHHHH-HHhCCcEEEecccccCcCCccC-CCCCCCCcE
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTRYSMHWISE-AHRNSWHVLLDATALVVGEDRL-NLALHRPDF 307 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~L-DLs~l~~DF 307 (344)
+.. +..+ + .++.-|.++.-|+ |.+-+++.|.. +|++|+++++ ++-.. ...-+ .-.++++|.
T Consensus 188 ~~~-~~~d--------~-----~~~a~v~vq~Pn~~G~~ed~~~i~~~~h~~gal~~~-~ad~~-aL~~l~~Pge~GADI 251 (429)
T PF02347_consen 188 DED-GTTD--------D-----DDTAAVMVQNPNTFGVFEDIKEIADIAHAAGALVIV-GADPN-ALGGLKSPGEYGADI 251 (429)
T ss_dssp BTT-CSB---------S-----TTEEEEEEESS-TTSB--THHHHHHHHHHTT-EEEE-CGGCC-GCCTC--GGGGT-SE
T ss_pred ccc-CCcc--------c-----cCeEEEEeecCCCCceEeeHHHHHHHHHHcCCEEEE-ecCHH-HHhCcCChhhcCccE
Confidence 753 4333 1 1354555554444 99999987765 6999999887 54443 21111 123579999
Q ss_pred EEEccccC-----CCCCCCceEEEEEeCCCcc
Q 035915 308 VLCNLDNT-----QNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~-----l~G~P~GiG~L~Vr~~~~~ 334 (344)
++.+ ||- -|||| |.|++-+|++...
T Consensus 252 ~vg~-~Q~fg~p~~~GGP-~~G~~a~~~~l~r 281 (429)
T PF02347_consen 252 VVGE-HQTFGIPMGFGGP-GAGFFAVREDLVR 281 (429)
T ss_dssp EEEC-CTTTT---CCC-S---EEEEE-GGGGG
T ss_pred EeeC-CCCCcccCCCCCC-CeeeEEEhhhhhh
Confidence 9666 664 26778 8999999987544
No 300
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=97.09 E-value=0.0024 Score=64.69 Aligned_cols=171 Identities=13% Similarity=0.088 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHcC--------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCC-cCHHHHHHHHHcCCcEEEEE
Q 035915 158 EIQARNKVLKHCG--------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIG-EELDYVREFASFKESKVILA 228 (344)
Q Consensus 158 le~AR~~IA~~Lg--------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~e-H~~~~ir~la~~~G~kV~~v 228 (344)
+-.-|+.+|+|+. .+|+ .||.|.|+|.++++++-.+. .+|+.++...- ++ -.-|.+.-+.|++++.+
T Consensus 123 l~~frqa~A~Fm~~~r~~~v~fdP~--~~Vv~~G~T~ane~l~fcLa-dpgdafLvPtPyY~-gfdrdl~~rTgveivpv 198 (471)
T KOG0256|consen 123 LPSFRQAVAEFMERARGNRVKFDPE--RVVVTNGATSANETLMFCLA-DPGDAFLVPTPYYP-GFDRDLRWRTGVEIVPV 198 (471)
T ss_pred chHHHHHHHHHHHHHhCCCCccCcc--ceEEecccchhhHHHHHHhc-CCCceeeecCCCCC-cccccceeccCceEEEE
Confidence 3456777787764 2455 79999999999999988875 48888653322 22 11133333579999888
Q ss_pred eCCCCCC-ccCHHHHHHHhhhcCC-CCCeeEEEEeCccc--cccccHHHHH-H---HHhCCcEEEecccccCc--CCccC
Q 035915 229 PEAWLDL-RIKGSQLSQYFRRKCK-HTPKGLFSYPADIN--GTRYSMHWIS-E---AHRNSWHVLLDATALVV--GEDRL 298 (344)
Q Consensus 229 p~~~~~g-~i~~~~L~~~l~~~~~-~~~t~LVa~~avSN--G~i~Pl~~Ia-~---ar~~g~~vlvDAaQa~~--G~~~L 298 (344)
.....++ +|+.+.|++++.+..+ ..+.+=+.++--+| |+.++=+.+. . +.++++++++|=.=+.. +...+
T Consensus 199 ~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F 278 (471)
T KOG0256|consen 199 HCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEF 278 (471)
T ss_pred EeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccCc
Confidence 7755443 7888888887764222 12345455554567 9999987554 2 37899999999654430 11100
Q ss_pred -CC---C-C--CCCc--EEEEccccCCCCCCC-ceEEEEEeCCCc
Q 035915 299 -NL---A-L--HRPD--FVLCNLDNTQNAQPS-KITCLLIRKKSF 333 (344)
Q Consensus 299 -DL---s-~--l~~D--Fvv~S~HK~l~G~P~-GiG~L~Vr~~~~ 333 (344)
.+ . . .++| -++.|.-|= ||-|. .+|++|-.++-.
T Consensus 279 ~Sv~ev~~~~~~~~~rvHivyslSKD-~GlpGfRvGviYS~ne~V 322 (471)
T KOG0256|consen 279 RSVLEVRKDPHLDPDRVHIVYSLSKD-FGLPGFRVGVIYSNNEDV 322 (471)
T ss_pred eEHHHHhhccccCCCcEEEEEEeccc-cCCCceEEEEEEecChHH
Confidence 00 0 1 1334 578889998 89883 489999866543
No 301
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=97.02 E-value=0.0076 Score=61.21 Aligned_cols=151 Identities=11% Similarity=0.155 Sum_probs=98.6
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHH---HHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCC
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRD---AMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLDL 235 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTe---Alnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g 235 (344)
.+..+.+|++=.-+. -++|+|.--. -+.+++.-+ +|.+|.|+-++|...+.-. +..++.-....-+
T Consensus 219 v~LE~eLA~LHqK~a---ALlFsSCfVANDstLftLak~l---pgcei~SD~gNHASMI~GI-rns~v~K~IFrHN---- 287 (570)
T KOG1360|consen 219 VRLEAELADLHQKEA---ALLFSSCFVANDSTLFTLAKKL---PGCEIFSDEGNHASMIQGI-RNSRVPKHIFRHN---- 287 (570)
T ss_pred hhHHHHHHHHhcCcc---eeeeeeeeeccchHHHHHHHHC---CCcEEeccccchHHHHHHh-hhcCCcceeeccC----
Confidence 344556777765443 4888874322 255666665 5889999888774333322 2234433333322
Q ss_pred ccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHH-HHHhCCcEEEecccccCcCCccCC---CC-----CCC
Q 035915 236 RIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWIS-EAHRNSWHVLLDATALVVGEDRLN---LA-----LHR 304 (344)
Q Consensus 236 ~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia-~ar~~g~~vlvDAaQa~~G~~~LD---Ls-----~l~ 304 (344)
|.+.|+++|..- .....++|+|-.+-. |.+-||++|. .+|++|+++++|-+|++ |..--. +. ...
T Consensus 288 --D~~hL~~lL~~~-~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAV-GlYG~rGaGvgerdGvm~k 363 (570)
T KOG1360|consen 288 --DLDHLEQLLQSS-PKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAV-GLYGPRGAGVGERDGVMHK 363 (570)
T ss_pred --CHHHHHHHHHhC-CCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhh-ccccCCCCCccccCCcchh
Confidence 456777777642 123578999987653 9999998775 57999999999999999 864211 21 146
Q ss_pred CcEEEEccccCCCCCCCceEEEEE
Q 035915 305 PDFVLCNLDNTQNAQPSKITCLLI 328 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~P~GiG~L~V 328 (344)
+|.++..+-|- || -+|.-+.
T Consensus 364 vDiIsGTLgKa-fG---cVGGYIA 383 (570)
T KOG1360|consen 364 VDIISGTLGKA-FG---CVGGYIA 383 (570)
T ss_pred hhhcccchhhh-cc---cccceeh
Confidence 89999999999 88 3555443
No 302
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.00 E-value=0.0087 Score=58.92 Aligned_cols=142 Identities=14% Similarity=0.009 Sum_probs=96.3
Q ss_pred HHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHH----------HHcCCcEEEEEeCCCCC
Q 035915 165 VLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELDYVREF----------ASFKESKVILAPEAWLD 234 (344)
Q Consensus 165 IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~l----------a~~~G~kV~~vp~~~~~ 234 (344)
-|+.||+...--..-|. ++|+|+..++.++ +++||++++..+-+.+.+.+. .+..|++.+.+|+.. +
T Consensus 74 yA~vf~aE~a~VRpq~i-sGTHAI~~aLfg~-LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~-~ 150 (416)
T COG4100 74 YAQVFGAEAALVRPQII-SGTHAIACALFGI-LRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTA-D 150 (416)
T ss_pred HHHHhccccceeeeeee-cchhHHHHHHHhc-cCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeeccccc-C
Confidence 46788886432123344 5688999988887 689999887777664444332 234578888899886 5
Q ss_pred CccCHHHHHHHhhhcCCCCCeeEEEEeCccc-ccc--ccHHHHHHH----Hh--CCcEEEecccccCcCCccCCCCCCCC
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-GTR--YSMHWISEA----HR--NSWHVLLDATALVVGEDRLNLALHRP 305 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G~i--~Pl~~Ia~a----r~--~g~~vlvDAaQa~~G~~~LDLs~l~~ 305 (344)
|.||.+.+...+++ +|+|+.+.--.. +-+ +++++|++. |+ .++.++||-+=.= =.....-...++
T Consensus 151 gkiD~~~v~~~i~~-----~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGE-FvE~~EPt~vGa 224 (416)
T COG4100 151 GKIDIQAVKTAISD-----RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGE-FVEEKEPTHVGA 224 (416)
T ss_pred CcccHHHHHHhcCc-----cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchh-hhhccCccccch
Confidence 89999999998876 589999985433 444 444666542 33 5899999975331 012222334689
Q ss_pred cEEEEccccC
Q 035915 306 DFVLCNLDNT 315 (344)
Q Consensus 306 DFvv~S~HK~ 315 (344)
|.+..|+=|-
T Consensus 225 DliAGSLIKN 234 (416)
T COG4100 225 DLIAGSLIKN 234 (416)
T ss_pred hhhccceeeC
Confidence 9999999998
No 303
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=96.95 E-value=0.0073 Score=58.97 Aligned_cols=190 Identities=15% Similarity=0.218 Sum_probs=113.8
Q ss_pred cCCCCCC---cccccchHHHHHHhhccC------CCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHH----
Q 035915 122 FGSNLPD---LDRTQLEPSRLLDILTKK------SSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTP-NYRDA---- 187 (344)
Q Consensus 122 ~Ga~lp~---~s~v~~~~~~L~~~L~gn------ss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTs-naTeA---- 187 (344)
||+. |+ .+.+.+.++.|.+. .|- -+.-++.....++++...+-+++|++ +.|.|+|.. |+|+.
T Consensus 11 FaaG-PAklp~~VL~e~qkdl~n~-~g~GisV~EmSHRsk~f~kii~~tes~lreLlniP-dn~~vlf~QGGGt~qFaAv 87 (370)
T KOG2790|consen 11 FAAG-PAKLPESVLLEAQKDLLNF-NGSGISVMEMSHRSKDFAKIINDTESLLRELLNIP-DNYKVLFLQGGGTGQFAAV 87 (370)
T ss_pred cCCC-cccCCHHHHHHHHHHhhcc-CCCcceEEEecccchhHHHHHHHHHHHHHHHHcCC-CceeEEEEeCCCccccccc
Confidence 6666 54 33455566666653 221 12345566677899999999999996 678999995 55654
Q ss_pred -HHHHHhhCCCCCC---CeEEE-cCCcCHHHHHHHHHcCCcEEEEEeCCC-C-CCcc-CHHHHHHHhhhcCCCCCeeEEE
Q 035915 188 -MMLVGESYPFFRG---NFYMT-IIGEELDYVREFASFKESKVILAPEAW-L-DLRI-KGSQLSQYFRRKCKHTPKGLFS 259 (344)
Q Consensus 188 -lnlva~sl~~~~G---d~ivS-~~eH~~~~ir~la~~~G~kV~~vp~~~-~-~g~i-~~~~L~~~l~~~~~~~~t~LVa 259 (344)
+|+++ ++.| |.++| .+. ..+..+ |++.|..-..+|... . -|.+ +.+.++ +++ +.+.|=
T Consensus 88 ~lNL~g----lK~g~~AdYiVTGsWS--~KA~~E-Akk~~~~~~V~~~~k~y~ygkvPd~~~w~--~~~-----da~yvy 153 (370)
T KOG2790|consen 88 PLNLIG----LKHGRCADYVVTGSWS--AKAAEE-AKKYGTPNIVIPKLKSYTYGKVPDPSTWE--LNP-----DASYVY 153 (370)
T ss_pred chhhhc----cccCCccceEEecccc--HHHHHH-HHhhCCceEEeccccccccCcCCChhhcc--cCC-----CccEEE
Confidence 45554 3444 34443 333 222223 444554333333211 1 1122 222221 122 234555
Q ss_pred EeCccc--cccccHHHHHHHHhCCcEEEecccccCcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 260 YPADIN--GTRYSMHWISEAHRNSWHVLLDATALVVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 260 ~~avSN--G~i~Pl~~Ia~ar~~g~~vlvDAaQa~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+.+.-+ |+-++- +..---+|+.+++|.+.-+ -..|+|++++ +.+.....|. .| |.|+.+.+||++++..
T Consensus 154 yCaNETVHGVEf~~--~P~~~~~~~vlVaDmSSnf-lSrpvDvsk~--gvi~aGAQKN-~G-~aG~Tvvivr~dllg~ 224 (370)
T KOG2790|consen 154 YCANETVHGVEFDF--IPVNDPKGAVLVADMSSNF-LSRPVDVSKF--GVIFAGAQKN-VG-PAGVTVVIVRKDLLGN 224 (370)
T ss_pred EecCceeeceecCC--CCCCCCCCceEEEecccch-hcCCccchhc--ceEEeccccc-cC-ccccEEEEEehhhhcc
Confidence 554333 665442 1111246888899999998 7899999975 6677889998 77 9999999999998866
No 304
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=96.94 E-value=0.041 Score=55.05 Aligned_cols=162 Identities=11% Similarity=0.002 Sum_probs=88.4
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhC-CC-----CCC-CeEE-EcCCcC-H-HHHHHHHHc----
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESY-PF-----FRG-NFYM-TIIGEE-L-DYVREFASF---- 220 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl-~~-----~~G-d~iv-S~~eH~-~-~~ir~la~~---- 220 (344)
.....+.-++++++++. + .+.|+++++||+..++... .+ ..| +.++ ..-.+| . .....+...
T Consensus 76 ~~~~~~la~~L~~~~~~--~--~~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~ 151 (397)
T TIGR03246 76 NEPVLRLAKKLVDATFA--D--KVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYS 151 (397)
T ss_pred CHHHHHHHHHHHhhCCC--C--EEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccc
Confidence 34456777788888764 3 6999999999977655532 11 023 3344 343444 2 111111100
Q ss_pred C-----CcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCc-cc-cccc-cH---HHHHH-HHhCCcEEEecc
Q 035915 221 K-----ESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPAD-IN-GTRY-SM---HWISE-AHRNSWHVLLDA 288 (344)
Q Consensus 221 ~-----G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~av-SN-G~i~-Pl---~~Ia~-ar~~g~~vlvDA 288 (344)
. ...+..+|.+ +.++|++.+.+ +++.|.+.-+ ++ |.+. |. +.+.+ |+++|+++++|=
T Consensus 152 ~~~~~~~~~~~~~~~~------d~~~l~~~l~~-----~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DE 220 (397)
T TIGR03246 152 QGFAPLPGGIKHAPYN------DLAAAKALISD-----KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDE 220 (397)
T ss_pred cCCCCCCCceEEeCCC------CHHHHHHHhcc-----CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 0 0122233322 46778888753 3555555434 34 6554 43 44433 589999999999
Q ss_pred cccCcCCcc----CCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 289 TALVVGEDR----LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 289 aQa~~G~~~----LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
+|.-.|... .......||.+++ =|. +|+=--+|+++.++++.+
T Consensus 221 v~tG~Gr~G~~~a~~~~gv~pDi~t~--~K~-lggG~pigav~~~~~i~~ 267 (397)
T TIGR03246 221 VQTGVGRTGELYAYMHYGVTPDILTS--AKA-LGGGFPIGAMLTTTEIAA 267 (397)
T ss_pred hhhcCCccccchhhhhcCCCCCEEEe--ehh-hhCCcceeEEEEcHHHHH
Confidence 994112211 1111246898865 577 541012888888877644
No 305
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=96.76 E-value=0.015 Score=58.57 Aligned_cols=169 Identities=12% Similarity=0.028 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeC-CHHHHHHHHHhhCCCCCCCeEEE-cCCc--C-HHHHHHHHHcC-CcEE--EEE
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTP-NYRDAMMLVGESYPFFRGNFYMT-IIGE--E-LDYVREFASFK-ESKV--ILA 228 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTs-naTeAlnlva~sl~~~~Gd~ivS-~~eH--~-~~~ir~la~~~-G~kV--~~v 228 (344)
...=++++.++.||++|+.+.|-.-+ +++-|+-.|-.++ +.+++.||. ++-| | +.....-.++- ...+ ..+
T Consensus 87 iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtal-l~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSm 165 (477)
T KOG2467|consen 87 IELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTAL-LKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESM 165 (477)
T ss_pred HHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhh-cCCCCeeeeccCCCCCccccccccCCceeeeeeeecccC
Confidence 33568899999999999888776554 5666655555555 567888873 2221 1 11110000100 1111 113
Q ss_pred e--CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHHHH-HHhCCcEEEecccccCcCCccCCCCC---
Q 035915 229 P--EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWISE-AHRNSWHVLLDATALVVGEDRLNLAL--- 302 (344)
Q Consensus 229 p--~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LDLs~--- 302 (344)
| ++...|.||.+.|++.... . +++|+..-.-+--..++...+++ +.+.|+++++|.||-- |..--.+-.
T Consensus 166 PYkv~~~TG~IDYD~Le~~A~~-f---rPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHIS-gLVAA~vipsPF 240 (477)
T KOG2467|consen 166 PYKVDPSTGYIDYDKLEKTATL-F---RPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMADMAHIS-GLVAAGVIPSPF 240 (477)
T ss_pred ceeeCCCCCceehHHHHHHHHh-c---CCcEEEeccccchhhccHHHHHHHHHhcCceeehhhhhHH-HHHhcccCCCcc
Confidence 3 3545688999999875432 1 34555554332478888888876 4779999999999975 543222211
Q ss_pred CCCcEEEEccccCCCCCCCceEEEEEeCCCc
Q 035915 303 HRPDFVLCNLDNTQNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 303 l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~ 333 (344)
..+|.++-+-||- +-||+| |+++.|+...
T Consensus 241 ey~DiVTTTTHKs-LRGPRg-~mIFyRkGvk 269 (477)
T KOG2467|consen 241 EYCDIVTTTTHKS-LRGPRG-AMIFYRKGVK 269 (477)
T ss_pred cccceeecccccc-ccCCcc-eeEEEeccCC
Confidence 2589999999999 666974 5555676543
No 306
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=96.69 E-value=0.029 Score=57.33 Aligned_cols=156 Identities=13% Similarity=0.010 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCC--CCe-EEEcCCcC--HHHHHHHHHcCCcEEEEEeCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFR--GNF-YMTIIGEE--LDYVREFASFKESKVILAPEA 231 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~--Gd~-ivS~~eH~--~~~ir~la~~~G~kV~~vp~~ 231 (344)
.+-+-+..|+++.|.+-. +--.=-++|.+-..+.-+....+ .+. +++..-|+ ...++..++..|++|+..+.+
T Consensus 121 aLfefQtlv~dLTGm~VA--NASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~ 198 (450)
T COG0403 121 ALFEFQTLVADLTGLDVA--NASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD 198 (450)
T ss_pred HHHHHHHHHHHHhCCCcc--cchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc
Confidence 456778889999998522 11222355655433333333322 344 45555576 556787888888998887765
Q ss_pred CCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc-c-ccccHHHH-HHHHhCCcEEEecccccCcCCccCCC------CC
Q 035915 232 WLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN-G-TRYSMHWI-SEAHRNSWHVLLDATALVVGEDRLNL------AL 302 (344)
Q Consensus 232 ~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN-G-~i~Pl~~I-a~ar~~g~~vlvDAaQa~~G~~~LDL------s~ 302 (344)
+.++|++. .. ..+--+.+..-+. | ...++..+ ..+|+.|++++| +..|+.| .+
T Consensus 199 ------d~~~l~~~-~~----~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v-------~aDplaL~LL~pPGe 260 (450)
T COG0403 199 ------DLDDLESA-DD----GDVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIV-------AADPLALGLLKPPGE 260 (450)
T ss_pred ------hhhhhhhc-cc----cCeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEE-------EechhHhhccCCccc
Confidence 34455554 22 1233333333333 8 66668655 567999998876 2233333 25
Q ss_pred CCCcEEEEccccC----CCCCCCceEEEEEeCCCc
Q 035915 303 HRPDFVLCNLDNT----QNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 303 l~~DFvv~S~HK~----l~G~P~GiG~L~Vr~~~~ 333 (344)
+++|.++.+++-+ -|||| .+|++-+|++..
T Consensus 261 ~GADIvvG~~QrfGvPmgfGGP-hag~fA~~~~~~ 294 (450)
T COG0403 261 FGADIVVGSAQRFGVPMGFGGP-HAGYFAVKDEFK 294 (450)
T ss_pred cCCceEEecCcccCCCcCCCCc-ceeeeeEhHhHh
Confidence 7899999999994 26667 688998887654
No 307
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=96.68 E-value=0.1 Score=52.65 Aligned_cols=89 Identities=13% Similarity=0.174 Sum_probs=55.6
Q ss_pred HHHHHHHhhhcCC-CCCeeEEEE-eCccc-ccc-ccHHHHH----HHHhCCcEEEeccccc-CcCCc----cCCCCCCCC
Q 035915 239 GSQLSQYFRRKCK-HTPKGLFSY-PADIN-GTR-YSMHWIS----EAHRNSWHVLLDATAL-VVGED----RLNLALHRP 305 (344)
Q Consensus 239 ~~~L~~~l~~~~~-~~~t~LVa~-~avSN-G~i-~Pl~~Ia----~ar~~g~~vlvDAaQa-~~G~~----~LDLs~l~~ 305 (344)
.+.+++.+.+... ......|.+ +.+++ |.+ .|-+.+. .|+++|+++++|-+|. + |.. ..+.....|
T Consensus 178 ~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~-GRtG~~~a~~~~~v~P 256 (412)
T TIGR02407 178 IAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGC-GRTGTFFSFEPAGIEP 256 (412)
T ss_pred HHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC-CccchhHHhcccCCCC
Confidence 4557777753110 012344444 44554 774 4445443 3588999999999997 3 431 233345689
Q ss_pred cEEEEccccCCCCCCCc--eEEEEEeCCC
Q 035915 306 DFVLCNLDNTQNAQPSK--ITCLLIRKKS 332 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~G--iG~L~Vr~~~ 332 (344)
|+++++ |+ +| +.| +|+++++++.
T Consensus 257 Di~~~~--K~-lg-~~G~pigav~~~~~~ 281 (412)
T TIGR02407 257 DIVCLS--KS-IS-GYGLPLALTLIKPEL 281 (412)
T ss_pred CEEEec--hh-cc-CCccceeEEEEchhh
Confidence 999988 99 66 333 8999998775
No 308
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=96.60 E-value=0.11 Score=53.20 Aligned_cols=77 Identities=10% Similarity=0.078 Sum_probs=51.8
Q ss_pred CeeEEEEe-Cccc-ccccc----HHHHHH-HHhCCcEEEeccccc-CcCCcc--CCCC--CCCCcEEEEccccCCCCCCC
Q 035915 254 PKGLFSYP-ADIN-GTRYS----MHWISE-AHRNSWHVLLDATAL-VVGEDR--LNLA--LHRPDFVLCNLDNTQNAQPS 321 (344)
Q Consensus 254 ~t~LVa~~-avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa-~~G~~~--LDLs--~l~~DFvv~S~HK~l~G~P~ 321 (344)
....|.+- .+++ |.+.| ++.+.+ |+++|+++++|=+|. + |..- +-.. ...||+++++ |. +|+-.
T Consensus 221 ~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~-gr~G~~~a~~~~gv~pDivt~~--K~-l~~G~ 296 (441)
T PRK05769 221 EVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGM-GRTGKMFAIEHFGVEPDIITLA--KA-IAGGL 296 (441)
T ss_pred ceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC-CcccceehhhccCCCCCEEEEc--cc-ccCCc
Confidence 35555554 4444 99999 766654 689999999999998 4 5432 1111 2468999886 76 55323
Q ss_pred ceEEEEEeCCCcc
Q 035915 322 KITCLLIRKKSFD 334 (344)
Q Consensus 322 GiG~L~Vr~~~~~ 334 (344)
.+|+++.+++..+
T Consensus 297 p~gav~~~~~i~~ 309 (441)
T PRK05769 297 PLGAVIGRAELMF 309 (441)
T ss_pred ccEEEEEehhhhh
Confidence 4899999887654
No 309
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=96.59 E-value=0.082 Score=53.60 Aligned_cols=91 Identities=11% Similarity=0.117 Sum_probs=56.0
Q ss_pred CHHHHHHHhhhcCC-CCCeeEEEE-eCccc-ccccc----HHHHH-HHHhCCcEEEecccccCcCC---c-cCCCCCCCC
Q 035915 238 KGSQLSQYFRRKCK-HTPKGLFSY-PADIN-GTRYS----MHWIS-EAHRNSWHVLLDATALVVGE---D-RLNLALHRP 305 (344)
Q Consensus 238 ~~~~L~~~l~~~~~-~~~t~LVa~-~avSN-G~i~P----l~~Ia-~ar~~g~~vlvDAaQa~~G~---~-~LDLs~l~~ 305 (344)
+.++|++.+..... ......|.+ +.+++ |.+.| ++.|. .|+++|+++++|-+|.-.|. . ..+.....|
T Consensus 181 ~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~P 260 (425)
T PRK09264 181 TLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITP 260 (425)
T ss_pred HHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCC
Confidence 44667777753110 012444444 44555 77653 35554 36899999999999961131 1 223334679
Q ss_pred cEEEEccccCCCCCCCc--eEEEEEeCCC
Q 035915 306 DFVLCNLDNTQNAQPSK--ITCLLIRKKS 332 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~G--iG~L~Vr~~~ 332 (344)
|+++++ |. +| +.| +|+++++++.
T Consensus 261 Di~t~~--K~-l~-~~G~pigav~~~~~i 285 (425)
T PRK09264 261 DIVTLS--KS-IS-GYGLPMALVLIKPEL 285 (425)
T ss_pred CEEEec--cc-cC-CCccceEEEEEchhh
Confidence 999997 98 76 334 6999998775
No 310
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=96.54 E-value=0.062 Score=53.76 Aligned_cols=186 Identities=10% Similarity=0.056 Sum_probs=99.8
Q ss_pred cCCCCCCcccccchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCC-
Q 035915 122 FGSNLPDLDRTQLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRG- 200 (344)
Q Consensus 122 ~Ga~lp~~s~v~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~G- 200 (344)
+|-.-|. .+++..+.+....+... .+......+.-++++++++. + .++|+.++|||+..+........|
T Consensus 38 lGh~~p~--v~~ai~~ql~~~~~~~~----~~~~~~~~~la~~l~~~~~~--~--~v~~~~SGseA~e~Alklar~~~gr 107 (364)
T PRK04013 38 LGHNHPE--WVEEMSEQLEKLVVAGP----MFEHEEKEEMLEELSKWVNY--E--YVYMGNSGTEAVEAALKFARLYTGR 107 (364)
T ss_pred CCCCCHH--HHHHHHHHHHhcCCccC----CcCCHHHHHHHHHHHhhcCC--C--EEEEeCchHHHHHHHHHHHHHHhCC
Confidence 6666444 44444444444222122 12344455566677888764 2 699999999998876553222234
Q ss_pred CeEEE-cCCcC--HHHHHHHH----HcCCc-----EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEE-eCccc-c
Q 035915 201 NFYMT-IIGEE--LDYVREFA----SFKES-----KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSY-PADIN-G 266 (344)
Q Consensus 201 d~ivS-~~eH~--~~~ir~la----~~~G~-----kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~-~avSN-G 266 (344)
++|++ ...+| ......+. .+.+. .+..+|.+ +.+.+++.+.+ ++.-|.+ +.+.+ |
T Consensus 108 ~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~------d~~~l~~~i~~-----~~aAvivEpi~g~gG 176 (364)
T PRK04013 108 KEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFN------DVEAAKEAITK-----ETAAVIFEPIQGEGG 176 (364)
T ss_pred CEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCC------CHHHHHHHhcC-----CcEEEEEcCCcCCCC
Confidence 55553 33344 21111100 01111 12223322 34667777753 2444444 44444 6
Q ss_pred cccc----HHHHHH-HHhCCcEEEeccccc---CcCCc-cCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 267 TRYS----MHWISE-AHRNSWHVLLDATAL---VVGED-RLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 267 ~i~P----l~~Ia~-ar~~g~~vlvDAaQa---~~G~~-~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
.+.| ++.+.+ |+++|+++++|-+|+ . |+. -.+.-...||++++ =|. +|+=--+|+++.+++.
T Consensus 177 ~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~Rt-G~~~a~~~~gv~PDiv~~--gK~-lggG~P~~a~~~~~~~ 247 (364)
T PRK04013 177 IVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRT-GKFLAIEHYKVEPDIVTM--GKG-IGNGVPVSLTLTNFDV 247 (364)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCC-CchhHHHhcCCCCCEEEe--ccc-ccCCceeEEEEecccc
Confidence 5543 556654 689999999999998 3 331 11122467999998 466 3321127888888765
No 311
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=96.50 E-value=0.03 Score=56.19 Aligned_cols=163 Identities=11% Similarity=0.038 Sum_probs=92.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh-CCCCCCCeEEEc-CCcC--HHHHHHHHHcCCc-------
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES-YPFFRGNFYMTI-IGEE--LDYVREFASFKES------- 223 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s-l~~~~Gd~ivS~-~eH~--~~~ir~la~~~G~------- 223 (344)
.....+.+++|++.+... + .|+||.++|||+..++.. ..+..+++|++. -.+| ...+..+ ...+.
T Consensus 87 ~~~~~~lae~l~~~~~~~-~--~v~~~~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~-~~~~~~~~~~~~ 162 (423)
T TIGR00713 87 TEAEILLAKEIISRVPSV-E--MVRFVNSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVK-AGSGAATLGLPT 162 (423)
T ss_pred CHHHHHHHHHHHHhCCcc-c--EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhcc-ccCcccccCCCC
Confidence 345577888999888643 3 799999999998765542 112234555532 2233 2211110 00010
Q ss_pred ----------EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEe
Q 035915 224 ----------KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLL 286 (344)
Q Consensus 224 ----------kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlv 286 (344)
.+..+|. -+.++|++.+... ..+++.|.+ +..+| |.+.| ++.+.+ |+++|+++++
T Consensus 163 ~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~--~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~ 234 (423)
T TIGR00713 163 SPGVPEDFAKLTLVLPY------NDLEALEEVFEEY--GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIF 234 (423)
T ss_pred CCCCCcccccceEEeCC------CCHHHHHHHHHHc--CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEE
Confidence 0111121 1567888888631 123555555 56666 98888 344443 5889999999
Q ss_pred cccccCcCC--c-cCCCCCCCCcEEEEccccCCCCCCCc--eEEEEEeCCCcc
Q 035915 287 DATALVVGE--D-RLNLALHRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFD 334 (344)
Q Consensus 287 DAaQa~~G~--~-~LDLs~l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~ 334 (344)
|=+|.-... . ........+|.+ ++=|. ++ + | +|+++.++++.+
T Consensus 235 DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~-l~-~-G~pig~v~~~~~i~~ 282 (423)
T TIGR00713 235 DEVMTGFRVALGGAQEYFGVEPDLT--TLGKI-IG-G-GLPVGAFGGRREIME 282 (423)
T ss_pred EccccccccCcchhHHHhCCCcchh--hhhhh-hc-C-CCceeeeeEHHHHHH
Confidence 999952011 0 011123468865 46788 66 3 4 899998876544
No 312
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.32 E-value=0.00066 Score=68.45 Aligned_cols=173 Identities=10% Similarity=-0.003 Sum_probs=103.6
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHH-HHHHHHhhCCC-CCCCe-EEEcCCcCHHHHHHHHHcCCcEEEEEeC--CCC
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRD-AMMLVGESYPF-FRGNF-YMTIIGEELDYVREFASFKESKVILAPE--AWL 233 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTe-Alnlva~sl~~-~~Gd~-ivS~~eH~~~~ir~la~~~G~kV~~vp~--~~~ 233 (344)
...-..+.+.+|+..- ...+.++-||. ++.+...++.. ..++. +.+-++|.+- ... +...|.+++.+|. ..+
T Consensus 59 n~l~~d~~~~~G~~~~-~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc-~ka-i~~AGl~~~vV~~~~~~d 135 (389)
T PF05889_consen 59 NSLVLDALRLAGLRSV-KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSC-FKA-IERAGLEPVVVENVLEGD 135 (389)
T ss_dssp HHHHHHHHHHTTHTTH-CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHH-HHH-HHHTT-EEEEE-EEEETT
T ss_pred HHHHHHHHHHcCCccc-cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccch-HHH-HHhcCCeEEEeeccCCCC
Confidence 3444556677888632 25777788887 45555555531 13455 4588887632 222 2335888888773 222
Q ss_pred CCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-c-ccccc-HHHHHH-HHhCCcEEEecccccC--------------cCC
Q 035915 234 DLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-N-GTRYS-MHWISE-AHRNSWHVLLDATALV--------------VGE 295 (344)
Q Consensus 234 ~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-N-G~i~P-l~~Ia~-ar~~g~~vlvDAaQa~--------------~G~ 295 (344)
....+.+.+++.+.... ....|..+++.+ + |...| ++.|++ |+++|+..+|-.|=.+ .|.
T Consensus 136 ~l~td~~~ie~~i~~~G--~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GR 213 (389)
T PF05889_consen 136 ELITDLEAIEAKIEELG--ADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGR 213 (389)
T ss_dssp EEEEHHHHHHHHHHHHC--GGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHST
T ss_pred eeeccHHHHHHHHHHhC--CCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCC
Confidence 23445666777775421 234677778777 5 99999 888876 6999999999876443 177
Q ss_pred ccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccccc
Q 035915 296 DRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDTST 337 (344)
Q Consensus 296 ~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~~~ 337 (344)
++.+++.++.||++-+|||. ..++.-.|++-+++..-.+++
T Consensus 214 vda~vqS~dkNF~VPvGgai-~As~~~~~i~~vs~~YpGRas 254 (389)
T PF05889_consen 214 VDAFVQSTDKNFMVPVGGAI-MASFDPSGILAVSKEYPGRAS 254 (389)
T ss_dssp CSEEEEEHHHHHCEESSHEE-EEESSHHHHHHHHHTSHSHBT
T ss_pred cceeeeecCCCEEecCCCcE-EEecCHHHHHHHHHHhhhhhh
Confidence 78888889999999999998 555654566666655555433
No 313
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.26 E-value=0.028 Score=57.84 Aligned_cols=147 Identities=13% Similarity=0.116 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCC-HHHHHHHHHhhCCCCCCCeEEEcCCcCHHHHHHHHHcCCcEEEEEeCCCCCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPN-YRDAMMLVGESYPFFRGNFYMTIIGEELDYVREFASFKESKVILAPEAWLDL 235 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsn-aTeAlnlva~sl~~~~Gd~ivS~~eH~~~~ir~la~~~G~kV~~vp~~~~~g 235 (344)
.-.+.-+.+|+|+|+.. .+||--| +|-++| +-++ ..+|.-++|+--+|.. ++-=|+-.|+.++...-+.
T Consensus 183 ~hkelE~l~A~f~g~e~---a~vF~mGf~TNs~~--~p~l-~~~gsLIiSDelNHaS-i~~GaRLSgAtiRVfkHNd--- 252 (519)
T KOG1357|consen 183 EHKELEELVARFLGVED---AIVFSMGFATNSMN--IPSL-LGKGSLIISDELNHAS-LITGARLSGATTRVFRHND--- 252 (519)
T ss_pred HHHHHHHHHHHhcCCcc---eEEEeccccccccC--ccee-ecCCcceeeccccchh-eeccccccCceEEEEecCC---
Confidence 44677788999999963 5899866 232322 1222 3467667765444421 3333555688888776542
Q ss_pred ccCHHHHHHHhh-------hcCCCC-CeeEEEEeCccc--cccccHHHH-HHHHhCCcEEEecccccCcCCcc-------
Q 035915 236 RIKGSQLSQYFR-------RKCKHT-PKGLFSYPADIN--GTRYSMHWI-SEAHRNSWHVLLDATALVVGEDR------- 297 (344)
Q Consensus 236 ~i~~~~L~~~l~-------~~~~~~-~t~LVa~~avSN--G~i~Pl~~I-a~ar~~g~~vlvDAaQa~~G~~~------- 297 (344)
..+|++.|+ +++... +..+++.-.... |.+..+.++ +..|++.+++++|.+|++ |...
T Consensus 253 ---m~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSi-GA~g~tGrgvc 328 (519)
T KOG1357|consen 253 ---MQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSI-GAMGATGRGVC 328 (519)
T ss_pred ---HHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccc-cccCCCCccee
Confidence 345555554 222111 233555555553 999999555 555889999999999999 8762
Q ss_pred --CCCCCCCCcEEEEccccCCCC
Q 035915 298 --LNLALHRPDFVLCNLDNTQNA 318 (344)
Q Consensus 298 --LDLs~l~~DFvv~S~HK~l~G 318 (344)
.-+...++|.|-..+-|. ||
T Consensus 329 e~~g~d~~dvDImMGtftKS-fg 350 (519)
T KOG1357|consen 329 EYFGVDPEDVDIMMGTFTKS-FG 350 (519)
T ss_pred eccCCCchhheeecceehhh-cc
Confidence 123446799999999998 77
No 314
>PLN02397 aspartate transaminase
Probab=96.25 E-value=0.11 Score=52.51 Aligned_cols=165 Identities=8% Similarity=-0.072 Sum_probs=90.6
Q ss_pred HHHHHHHHHHHcCCC-C-C--CCeE--EEeCCHHHHHHHHHhhCC-CCCCCeEE-EcCCcCHHHHHHHHHcCCcEEEEEe
Q 035915 158 EIQARNKVLKHCGLP-D-D--EYLV--LFTPNYRDAMMLVGESYP-FFRGNFYM-TIIGEELDYVREFASFKESKVILAP 229 (344)
Q Consensus 158 le~AR~~IA~~Lga~-p-~--ey~V--VFTsnaTeAlnlva~sl~-~~~Gd~iv-S~~eH~~~~ir~la~~~G~kV~~vp 229 (344)
..+.|+.|++++.-. . . +..| +-|.+++++..++...+. +.+||+++ ..-.+. + ....++..|++++.+|
T Consensus 93 ~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~-~-y~~~~~~~g~~~~~v~ 170 (423)
T PLN02397 93 LAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWG-N-HHNIFRDAGVPVRTYR 170 (423)
T ss_pred CHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCch-h-HHHHHHHcCCeEEEee
Confidence 456788888876321 1 0 1134 224444445433322111 24899864 333322 1 2233455699999888
Q ss_pred C-CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHH----HHhCCcEEEecccccCcCCc------
Q 035915 230 E-AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISE----AHRNSWHVLLDATALVVGED------ 296 (344)
Q Consensus 230 ~-~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~----ar~~g~~vlvDAaQa~~G~~------ 296 (344)
. +..+..++.+.+.+.+... ..+++++.++.-+| |..++.+.+.+ +++++++++.|-+=.-....
T Consensus 171 l~~~~~~~~d~~~l~~~l~~~--~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~ 248 (423)
T PLN02397 171 YYDPKTRGLDFDGLLEDLKAA--PDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADA 248 (423)
T ss_pred cccCcCCccCHHHHHHHHHhC--CCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhh
Confidence 6 2222357888787776531 12466777764455 99999965532 47899999998763310100
Q ss_pred -cC-CCCCCCC-cEEEEccccCCCCCCC-ceEEEE
Q 035915 297 -RL-NLALHRP-DFVLCNLDNTQNAQPS-KITCLL 327 (344)
Q Consensus 297 -~L-DLs~l~~-DFvv~S~HK~l~G~P~-GiG~L~ 327 (344)
++ .+...+. =+++.|+=|. |+.|. .+|.++
T Consensus 249 ~~~~~~~~~~~~vI~~~SfSK~-~~~~G~RvG~~v 282 (423)
T PLN02397 249 QSVRMFVEDGHEILVAQSYAKN-MGLYGERVGALS 282 (423)
T ss_pred HHHHHHHhcCCcEEEEEECccc-CCCccccceEEE
Confidence 00 1111111 2667799999 88441 378885
No 315
>PRK06062 hypothetical protein; Provisional
Probab=96.24 E-value=0.16 Score=52.15 Aligned_cols=91 Identities=12% Similarity=0.096 Sum_probs=57.6
Q ss_pred HHHHHHHhhhcCCCCCeeEE-EEeCccc-ccccc----HHHHHH-HHhCCcEEEecccccCcCCcc----CCCCCCCCcE
Q 035915 239 GSQLSQYFRRKCKHTPKGLF-SYPADIN-GTRYS----MHWISE-AHRNSWHVLLDATALVVGEDR----LNLALHRPDF 307 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~LV-a~~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DF 307 (344)
.++|++.|... ...+...| .=+.+++ |.+.| ++.+.+ |+++|+++++|=+|.-.|..- .+.-...||+
T Consensus 200 ~~~le~~l~~~-~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv~PDi 278 (451)
T PRK06062 200 LAHLERVIELE-GPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGVVPDL 278 (451)
T ss_pred HHHHHHHHHhc-CCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCCCCCe
Confidence 35567777431 11233334 3455555 99988 666654 689999999999998325321 1222357998
Q ss_pred EEEccccCCCCC---CCceEEEEEeCCCccc
Q 035915 308 VLCNLDNTQNAQ---PSKITCLLIRKKSFDT 335 (344)
Q Consensus 308 vv~S~HK~l~G~---P~GiG~L~Vr~~~~~~ 335 (344)
+++ =|. +|+ | +|+++.++++.+.
T Consensus 279 ~t~--gK~-lggG~~P--igav~~~~~i~~~ 304 (451)
T PRK06062 279 ITF--AKG-VNSGYVP--LGGVAISEAIAAT 304 (451)
T ss_pred eee--chh-hhcCCcC--cEEEEEcHHHHHH
Confidence 876 587 553 5 8889998876553
No 316
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=96.19 E-value=0.016 Score=57.06 Aligned_cols=180 Identities=10% Similarity=0.008 Sum_probs=94.4
Q ss_pred hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC------CCCC-CeEEEcC-CcC--HH-HHH----
Q 035915 151 GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP------FFRG-NFYMTII-GEE--LD-YVR---- 215 (344)
Q Consensus 151 g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~------~~~G-d~ivS~~-eH~--~~-~ir---- 215 (344)
.........+.-+++.+.++-. ...|.|+.++|||+..++.--. ..++ ..|++.. .+| .. ++.
T Consensus 54 ~~~~~~~~~~la~~L~~~~p~~--~~~v~f~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~ 131 (339)
T PF00202_consen 54 SGFTHPEAAELAEKLAELFPGG--LDRVFFANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGN 131 (339)
T ss_dssp TTSEEHHHHHHHHHHHHHSSTT--EEEEEEESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSS
T ss_pred cceeccchhhhhhhhhhccccc--cceeeeccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCC
Confidence 3444555566667777777432 2379999999999776544221 1123 3455432 344 11 111
Q ss_pred -HHHHcC---CcEEEEEeCCCCCC----ccCHHHHHHHhhhcCCCCCeeEEEE-eCccc-cccccH-HHHH----HHHhC
Q 035915 216 -EFASFK---ESKVILAPEAWLDL----RIKGSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYSM-HWIS----EAHRN 280 (344)
Q Consensus 216 -~la~~~---G~kV~~vp~~~~~g----~i~~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~Pl-~~Ia----~ar~~ 280 (344)
.+.... ...+..+|...... .-....+.+.+.... ......|.+ |.+.+ |.+.|- +++. .|+++
T Consensus 132 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~ 210 (339)
T PF00202_consen 132 PPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALN-ADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREH 210 (339)
T ss_dssp THHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHH-GGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHT
T ss_pred ccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhc-CCcEEEEEEeccccccCccccccchhhehccccccc
Confidence 111111 12345567653211 000111222221110 012434444 55555 766653 4443 35889
Q ss_pred CcEEEecccccCcCCccCCC----CCCCCcEEEEccccCCCCCCCceEEEEEeCCCcccc
Q 035915 281 SWHVLLDATALVVGEDRLNL----ALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDTS 336 (344)
Q Consensus 281 g~~vlvDAaQa~~G~~~LDL----s~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~~ 336 (344)
|+++++|=+|.-.|..---+ ..+.||+++++ |.|-|| --+|++++++++.+..
T Consensus 211 gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~g--K~l~gG-~p~sav~~~~~i~~~~ 267 (339)
T PF00202_consen 211 GILLIADEVQTGFGRTGKFFASEHYGVDPDIVTFG--KGLGGG-LPISAVLGSEEIMEAF 267 (339)
T ss_dssp T-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEEE--GGGGTT-SSEEEEEEEHHHHTTS
T ss_pred ccceecccccccccccCCccceecccccCcccccc--cchhhh-hhcccccccchhhccc
Confidence 99999999998324332112 24679999998 884444 4599999999877653
No 317
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=96.18 E-value=0.15 Score=52.67 Aligned_cols=166 Identities=9% Similarity=0.025 Sum_probs=89.1
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---hCCCCCCC-eEEE-cCCcC--HHHHHHHHHcCCc----
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGE---SYPFFRGN-FYMT-IIGEE--LDYVREFASFKES---- 223 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~---sl~~~~Gd-~ivS-~~eH~--~~~ir~la~~~G~---- 223 (344)
.....+.-+++++++....+ .|.|+.++|||+..... .+.-.+|. .|++ .-.+| ......+......
T Consensus 123 ~~~~~~lae~L~~~~p~~~~--~v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~ 200 (459)
T PRK11522 123 DPLRAMLAKTLAALTPGKLK--YSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPF 200 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC--EEEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCC
Confidence 33445555666666543222 69999999998776443 33212233 3543 33344 2111111000000
Q ss_pred -----EEEEEeCCCCCCccCHHHHHHHhhhc-CCCCCee-EEEEeCccc-ccccc----HHHHHH-HHhCCcEEEecccc
Q 035915 224 -----KVILAPEAWLDLRIKGSQLSQYFRRK-CKHTPKG-LFSYPADIN-GTRYS----MHWISE-AHRNSWHVLLDATA 290 (344)
Q Consensus 224 -----kV~~vp~~~~~g~i~~~~L~~~l~~~-~~~~~t~-LVa~~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQ 290 (344)
.+..+|.+ +.+++++.+... ....+.. ++.=+.+++ |.+.| ++.+.+ |+++|+++++|=+|
T Consensus 201 ~~~~~~~~~~~~~------d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~ 274 (459)
T PRK11522 201 MPLLPGFRHVPFG------NIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQ 274 (459)
T ss_pred CCCCCCCcccCCC------CHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccce
Confidence 11122221 346677766421 0012333 444455555 99888 666654 68999999999999
Q ss_pred c-CcCCcc----CCCCCCCCcEEEEccccCCCCC---CCceEEEEEeCCCcc
Q 035915 291 L-VVGEDR----LNLALHRPDFVLCNLDNTQNAQ---PSKITCLLIRKKSFD 334 (344)
Q Consensus 291 a-~~G~~~----LDLs~l~~DFvv~S~HK~l~G~---P~GiG~L~Vr~~~~~ 334 (344)
. + |..- .......||.+++ =|. +|+ | +|+++++++..+
T Consensus 275 tG~-GRtG~~~a~e~~gv~PDivt~--gK~-lggG~~P--igav~~~~~i~~ 320 (459)
T PRK11522 275 TGM-GRTGKMFACEHENVQPDILCL--AKA-LGGGVMP--IGATIATEEVFS 320 (459)
T ss_pred ecC-CccchhhhhhccCCCCCEEEe--chh-hhCCCcc--ceeEEEcHHHHH
Confidence 5 3 3221 1122356998866 587 553 5 899999877654
No 318
>PRK06105 aminotransferase; Provisional
Probab=96.01 E-value=0.13 Score=52.99 Aligned_cols=88 Identities=15% Similarity=0.215 Sum_probs=54.8
Q ss_pred HHHHHHhhhcCCCCCeeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEeccccc-CcCCcc----CCCCCCCCcE
Q 035915 240 SQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATAL-VVGEDR----LNLALHRPDF 307 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa-~~G~~~----LDLs~l~~DF 307 (344)
+++++.+... ...+..-|.+ +.+.+ |.+.| ++.+.+ |+++|+++++|=+|. + |..- .+.....||+
T Consensus 205 ~~le~~~~~~-~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~-GRtG~~f~~~~~~v~PDi 282 (460)
T PRK06105 205 NELEALILAE-GPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGF-GRTGNMFGCETFGIKPDI 282 (460)
T ss_pred HHHHHHHHHc-CCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCC-CcCchhhhHHhcCCCCCe
Confidence 4566666421 1123344444 55555 88877 555544 589999999999995 5 6421 2233467999
Q ss_pred EEEccccCCCCC---CCceEEEEEeCCCcc
Q 035915 308 VLCNLDNTQNAQ---PSKITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~l~G~---P~GiG~L~Vr~~~~~ 334 (344)
++++ |- +|+ | +|++++++++.+
T Consensus 283 ~~~g--K~-lggG~~P--~~av~~~~~i~~ 307 (460)
T PRK06105 283 LVMS--KQ-LSSSYQP--LSAVLMNEKVYD 307 (460)
T ss_pred eeee--cc-cccCccc--ceEEEEcHHHHH
Confidence 8775 66 432 5 888888877654
No 319
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=95.89 E-value=0.23 Score=51.07 Aligned_cols=167 Identities=9% Similarity=-0.000 Sum_probs=89.2
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---hCCCCCCC-eEEE-cCCcC--HHHHHHHHH----cCC-
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGE---SYPFFRGN-FYMT-IIGEE--LDYVREFAS----FKE- 222 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~---sl~~~~Gd-~ivS-~~eH~--~~~ir~la~----~~G- 222 (344)
.....+.-+++++.+...- ..|.|+.++|||+..... .+.-..|. .|++ .-.+| ......+-. +.+
T Consensus 116 ~~~~~~lAe~L~~~~p~~~--~~v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~ 193 (442)
T TIGR03372 116 DPLRALLAKTLAALTPGKL--KYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPF 193 (442)
T ss_pred CHHHHHHHHHHHHhCCCCc--CEEEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCC
Confidence 3344555556666654322 269999999998776443 33111243 3543 33344 211111100 001
Q ss_pred ----cEEEEEeCCCCCCccCHHHHHHHhhhc-CCCCCeeE-EEEeCccc-ccccc----HHHHHH-HHhCCcEEEecccc
Q 035915 223 ----SKVILAPEAWLDLRIKGSQLSQYFRRK-CKHTPKGL-FSYPADIN-GTRYS----MHWISE-AHRNSWHVLLDATA 290 (344)
Q Consensus 223 ----~kV~~vp~~~~~g~i~~~~L~~~l~~~-~~~~~t~L-Va~~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQ 290 (344)
..+..+|.+ +.+.+++.+... ....+... +.=+.+++ |.+.| ++.+.+ |+++|+++++|=+|
T Consensus 194 ~p~~~~~~~~p~~------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~ 267 (442)
T TIGR03372 194 MPLLPGFHHVAFG------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ 267 (442)
T ss_pred CCCCCCCEEeCCC------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecc
Confidence 113334432 234555555320 01123443 43455555 99888 766654 68999999999999
Q ss_pred c-CcCCcc----CCCCCCCCcEEEEccccCCCCC---CCceEEEEEeCCCccc
Q 035915 291 L-VVGEDR----LNLALHRPDFVLCNLDNTQNAQ---PSKITCLLIRKKSFDT 335 (344)
Q Consensus 291 a-~~G~~~----LDLs~l~~DFvv~S~HK~l~G~---P~GiG~L~Vr~~~~~~ 335 (344)
. + |..- .......||++++ =|- +|+ | +|+++.++++.+.
T Consensus 268 tG~-GRtG~~~a~e~~gv~PDivt~--gK~-lg~G~~P--igavv~~~~i~~~ 314 (442)
T TIGR03372 268 TGM-GRTGKMFACEHEGVQPDILCL--AKA-LGGGVMP--IGATIATEAVFSV 314 (442)
T ss_pred cCC-CccccchhhhhcCCCCCeeee--hhh-hcCCccc--ceEEEecHHHHHh
Confidence 5 3 4221 1112346999875 587 552 5 7888888876543
No 320
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=95.78 E-value=0.51 Score=48.32 Aligned_cols=77 Identities=12% Similarity=0.121 Sum_probs=49.5
Q ss_pred CeeEEEE-eCccc-ccccc----HHHHH-HHHhCCcEEEecccccCcCCcc----CCCCCCCCcEEEEccccCCCCCCCc
Q 035915 254 PKGLFSY-PADIN-GTRYS----MHWIS-EAHRNSWHVLLDATALVVGEDR----LNLALHRPDFVLCNLDNTQNAQPSK 322 (344)
Q Consensus 254 ~t~LVa~-~avSN-G~i~P----l~~Ia-~ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DFvv~S~HK~l~G~P~G 322 (344)
++..|.+ |.+++ |.+.| ++.+. .|+++|+++++|=+|.-.|... .......+|++++ =|. +| + |
T Consensus 204 ~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDiitl--sK~-l~-~-G 278 (443)
T PRK08360 204 GVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDIITL--GKP-LG-G-G 278 (443)
T ss_pred CeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEEEe--ccc-cc-C-C
Confidence 3554444 54444 88887 34443 3588999999999987314322 1112357898866 788 76 3 4
Q ss_pred --eEEEEEeCCCccc
Q 035915 323 --ITCLLIRKKSFDT 335 (344)
Q Consensus 323 --iG~L~Vr~~~~~~ 335 (344)
+|+++.++++.+.
T Consensus 279 ~pigav~~~~~i~~~ 293 (443)
T PRK08360 279 LPISATIGRAEIMDS 293 (443)
T ss_pred ceeEEEEEcHHHHhh
Confidence 8999988765543
No 321
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=95.74 E-value=0.077 Score=53.74 Aligned_cols=167 Identities=8% Similarity=-0.042 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh-CCCCCCCeEEE-cCCcC--HHHHHHHHH----c------C
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES-YPFFRGNFYMT-IIGEE--LDYVREFAS----F------K 221 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s-l~~~~Gd~ivS-~~eH~--~~~ir~la~----~------~ 221 (344)
....+.++++++.+. ..+ .|.||.+++||+..+... ..+..++.+++ .-.+| ......+.. . .
T Consensus 90 ~~~~~la~~L~~~~~-~~~--~v~~~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~ 166 (426)
T PRK00062 90 ELEVELAELVIELVP-SIE--MVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSP 166 (426)
T ss_pred HHHHHHHHHHHHhCC-CCC--EEEEecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCC
Confidence 344566777776653 123 699999999998876653 22223445543 22344 211111100 0 0
Q ss_pred CcEE----EEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEe-Cccc-ccccc----HHHHH-HHHhCCcEEEecccc
Q 035915 222 ESKV----ILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYP-ADIN-GTRYS----MHWIS-EAHRNSWHVLLDATA 290 (344)
Q Consensus 222 G~kV----~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~-avSN-G~i~P----l~~Ia-~ar~~g~~vlvDAaQ 290 (344)
+... ....... -+.+++++.+.+. ..++..|.+- ..++ |.+.| ++.+. .|+++|+++++|=+|
T Consensus 167 ~~~~~~~~~~~~~~~----~d~~~l~~~i~~~--~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~ 240 (426)
T PRK00062 167 GVPEDFAKHTLTAPY----NDLEAVEELFEEY--GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVM 240 (426)
T ss_pred CCCcccccceEEcCC----CCHHHHHHHHHhC--CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeech
Confidence 1100 0011111 1567788777531 1235555554 5565 99988 65554 468999999999999
Q ss_pred cCcCCcc---CCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 291 LVVGEDR---LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 291 a~~G~~~---LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
.-..... .+.-...||++++ -|. +++=-.+|+++.++++.+
T Consensus 241 ~G~r~g~~~~~~~~~~~pDi~~~--gK~-l~~G~p~ga~~~~~~i~~ 284 (426)
T PRK00062 241 TGFRVALGGAQGYYGVTPDLTTL--GKI-IGGGLPVGAFGGRREIME 284 (426)
T ss_pred hccccCCccHHHHhCCCcchHhh--hhH-hhCCCcceeeeEHHHHHH
Confidence 7311111 1111235887655 598 652011788888766544
No 322
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=95.73 E-value=0.34 Score=49.04 Aligned_cols=174 Identities=11% Similarity=0.045 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh-CCCCCCCeEEEc-CCcC--HH-HH--HH-HH-HcCC---
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES-YPFFRGNFYMTI-IGEE--LD-YV--RE-FA-SFKE--- 222 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s-l~~~~Gd~ivS~-~eH~--~~-~i--r~-la-~~~G--- 222 (344)
.....+.-+++++++.-. ...|.|+.+++||+..++.. ..+.....+++. -.+| .. .+ .. .. .+.+
T Consensus 85 ~~~~~~la~~L~~~~~~~--~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~ 162 (433)
T PRK08117 85 YESILKLAEELAEITPGG--LDCFFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQP 162 (433)
T ss_pred CHHHHHHHHHHHHhCCCC--CCEEEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCC
Confidence 344566777788877322 22799999999987765442 111122345432 2234 11 11 10 00 0001
Q ss_pred --cEEEEEeCCCCC----C----c---cCHHHHHHHhhhcCCCCCeeEEEE-eCccc-ccccc----HHHHHH-HHhCCc
Q 035915 223 --SKVILAPEAWLD----L----R---IKGSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYS----MHWISE-AHRNSW 282 (344)
Q Consensus 223 --~kV~~vp~~~~~----g----~---i~~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~ 282 (344)
..+..+|..... + . -+.++|++.+.......+...|.+ +.+++ |.+.| ++.+.+ |+++|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ 242 (433)
T PRK08117 163 LLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGI 242 (433)
T ss_pred CCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 112333332100 0 0 133456666642111123444444 44455 99988 766654 689999
Q ss_pred EEEecccccCcCCcc--C--CCCCCCCcEEEEccccCCCCCCCc--eEEEEEeCCCccc
Q 035915 283 HVLLDATALVVGEDR--L--NLALHRPDFVLCNLDNTQNAQPSK--ITCLLIRKKSFDT 335 (344)
Q Consensus 283 ~vlvDAaQa~~G~~~--L--DLs~l~~DFvv~S~HK~l~G~P~G--iG~L~Vr~~~~~~ 335 (344)
++++|=+|.-.|..- + .--...||++ ++=|. +| + | +|+++.+++..+.
T Consensus 243 llI~DEv~tG~gr~G~~~~~~~~gv~pDi~--t~sK~-lg-~-G~pigav~~~~~i~~~ 296 (433)
T PRK08117 243 LLIFDEVQTGFGRTGEWFAAQTFGVVPDIM--TIAKG-IA-S-GLPLSAVVASKELMEQ 296 (433)
T ss_pred EEEEecchhccCccccchhHhhcCCCCCEe--ehhhh-cc-C-CCcceeEEEcHHHHhh
Confidence 999999988323321 1 1112458875 55688 66 2 4 8889888776543
No 323
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=95.70 E-value=0.21 Score=52.21 Aligned_cols=89 Identities=16% Similarity=0.162 Sum_probs=56.2
Q ss_pred HHHHHHhhhcCCCCCeeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEeccccc-CcCCccC----CCCCCCCcE
Q 035915 240 SQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATAL-VVGEDRL----NLALHRPDF 307 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa-~~G~~~L----DLs~l~~DF 307 (344)
++|++.+... .......|.+ +.+.+ |.+.| ++.+.+ |+++|+++++|=+|. + |..-- +.....||+
T Consensus 247 ~~le~~l~~~-~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGf-GRtG~~~a~e~~gv~PDi 324 (504)
T PLN02760 247 DNLENLILKE-GPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAF-GRLGTMFGCDKYNIKPDL 324 (504)
T ss_pred HHHHHHHHhc-CCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCC-cccchhhHHHhcCCCCcE
Confidence 3466665421 1123444444 44455 99988 777754 699999999999994 5 54321 222346998
Q ss_pred EEEccccCCCCC---CCceEEEEEeCCCccc
Q 035915 308 VLCNLDNTQNAQ---PSKITCLLIRKKSFDT 335 (344)
Q Consensus 308 vv~S~HK~l~G~---P~GiG~L~Vr~~~~~~ 335 (344)
+++ =|. +|+ | +|++++++++.+.
T Consensus 325 vtl--gK~-lggG~~P--igAv~~~~~i~d~ 350 (504)
T PLN02760 325 VSL--AKA-LSSAYMP--IGAVLVSPEISDV 350 (504)
T ss_pred EEe--ccc-ccCCccc--cceEeecHHHHhh
Confidence 777 477 543 5 7888888876553
No 324
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=95.68 E-value=0.2 Score=51.86 Aligned_cols=260 Identities=15% Similarity=0.178 Sum_probs=136.0
Q ss_pred hHHHHHHhhhccccccccCCCCCchhhHHHHHHHHhcCcccCccccccccccccccccCCCCCCCCCCCCCCCCCCCCCC
Q 035915 38 HIVAEAISTLHGLDLRWSGPITPTEMQYVEQYVLAKYPQYAGLVEGEKVDLSSLCINEESSETGPDDRRKSPRNGFRSEP 117 (344)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (344)
.+||.-..+||. -+++...+.+|..+.+=.+=||=..-.++==.|+.+..+ ++..| -.+|+
T Consensus 15 D~IadY~e~ir~-----r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~------PGitH-w~hP~------- 75 (511)
T KOG0628|consen 15 DYIADYLENIRK-----RRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIM------PGITH-WQHPH------- 75 (511)
T ss_pred HHHHHHHHhhhc-----cCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHcc------CCCcc-cCCCc-------
Confidence 357777777776 466777788898888877777654222201112333333 22333 11444
Q ss_pred CCCCcCCCCCCcccccchHHHHHHhhccC---CCC---hhhhhhHHHHHHHHHHHHHcCCCC--------CCCeEEEeCC
Q 035915 118 STPSFGSNLPDLDRTQLEPSRLLDILTKK---SSF---PGSFISIPEIQARNKVLKHCGLPD--------DEYLVLFTPN 183 (344)
Q Consensus 118 ~~~~~Ga~lp~~s~v~~~~~~L~~~L~gn---ss~---~g~~as~~le~AR~~IA~~Lga~p--------~ey~VVFTsn 183 (344)
|=|=.|.. ...++-+-++|.+. -.| .+...++..--.=+-++++++.+. +--.|++. +
T Consensus 76 ----fhAyfpa~---~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~-t 147 (511)
T KOG0628|consen 76 ----FHAYFPAG---NSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQG-T 147 (511)
T ss_pred ----eeeEccCc---cchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEec-C
Confidence 22222221 12233344444333 111 112233333445566666666531 11145554 4
Q ss_pred HHHHHHHH--Hh----------hCC-CCCC----CeEE--EcCCcCHHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHH
Q 035915 184 YRDAMMLV--GE----------SYP-FFRG----NFYM--TIIGEELDYVREFASFKESKVILAPEAWLDLRIKGSQLSQ 244 (344)
Q Consensus 184 aTeAlnlv--a~----------sl~-~~~G----d~iv--S~~eH~~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~ 244 (344)
++|+.-++ +. +-| +... +.|+ |+-.|. .+..-|--.|++.+.++.+. +-.+..+.|++
T Consensus 148 ases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahs--sveka~~i~~VklR~l~td~-n~~mr~~~L~~ 224 (511)
T KOG0628|consen 148 ASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHS--SVEKACLIAGVKLRALPTDE-NFGMRGDTLRK 224 (511)
T ss_pred cchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEecCcccc--hHHHhHhhcceeEEEeeccc-CcCCCHHHHHH
Confidence 45553321 11 111 1111 1233 333333 24443444578899999886 56788999999
Q ss_pred HhhhcCCCCCeeEEEEeCccc-c-----ccccHHHHHH-HHhCCcEEEeccccc----CcCCccCCCCC-CCCcEEEEcc
Q 035915 245 YFRRKCKHTPKGLFSYPADIN-G-----TRYSMHWISE-AHRNSWHVLLDATAL----VVGEDRLNLAL-HRPDFVLCNL 312 (344)
Q Consensus 245 ~l~~~~~~~~t~LVa~~avSN-G-----~i~Pl~~Ia~-ar~~g~~vlvDAaQa----~~G~~~LDLs~-l~~DFvv~S~ 312 (344)
++.++.. .+++=+..+-| | ..=+|+++.. ++++|+++|||||=+ +|.-.+--+.- -.+|-+.++.
T Consensus 225 AIe~D~a---rGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~ 301 (511)
T KOG0628|consen 225 AIEEDIA---RGLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNP 301 (511)
T ss_pred HHHHHHh---CCCccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCCh
Confidence 8875432 23333322222 2 3344566654 689999999999866 32222211221 2589999999
Q ss_pred ccCCCCCCCceEEEEEeCC
Q 035915 313 DNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 313 HK~l~G~P~GiG~L~Vr~~ 331 (344)
||| +-.=..+..||+|+.
T Consensus 302 hK~-~~vnfDCs~lWvkd~ 319 (511)
T KOG0628|consen 302 HKW-LLVNFDCSPLWVKDG 319 (511)
T ss_pred hhe-eEEeeeeecceeecC
Confidence 999 433457888999987
No 325
>PRK12566 glycine dehydrogenase; Provisional
Probab=95.65 E-value=0.12 Score=57.86 Aligned_cols=152 Identities=13% Similarity=0.088 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHH---HHHHHHHhhCCCCCCCe-EEEcCCcC--HHHHHHHHHcCCcEEEEEeC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYR---DAMMLVGESYPFFRGNF-YMTIIGEE--LDYVREFASFKESKVILAPE 230 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaT---eAlnlva~sl~~~~Gd~-ivS~~eH~--~~~ir~la~~~G~kV~~vp~ 230 (344)
.+-+-+.-|+++.|.+-.. --.=.++| ||+.+..+.-. .+.+. +++..-|+ ...++..++..|++++.-
T Consensus 125 al~e~Qtmi~~LtGm~vaN--ASl~D~atA~aEA~~ma~~~~~-~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~~-- 199 (954)
T PRK12566 125 ALLNFQQMTIDLTGLDLAN--ASLLDEATAAAEAMALAKRVAK-SKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVVD-- 199 (954)
T ss_pred HHHHHHHHHHHHhCchhhh--hhhccchhHHHHHHHHHHHHhh-cCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEEc--
Confidence 4567778899999875211 11112333 55655443211 11344 45555577 345677777788888751
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-c--cccccHHHH-HHHHhCCcEEEecccccCcCCccC-CCCCCCC
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-N--GTRYSMHWI-SEAHRNSWHVLLDATALVVGEDRL-NLALHRP 305 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-N--G~i~Pl~~I-a~ar~~g~~vlvDAaQa~~G~~~L-DLs~l~~ 305 (344)
++++.+.. .++++..++ | |.+.+++.| ..+|+.|+++++ ++-.+ ...-| .-.++++
T Consensus 200 ----------~~~~~~~~-------~~~~v~vq~P~~~G~i~d~~~i~~~~h~~gal~~~-~~d~l-aL~ll~~Pge~GA 260 (954)
T PRK12566 200 ----------AVDNLAAH-------AVFGALLQYPDTHGEIRDLRPLIDQLHGQQALACV-AADLL-SLLVLTPPGELGA 260 (954)
T ss_pred ----------chhhcCCC-------CEEEEEEECCCCceEEccHHHHHHHHHHcCCEEEE-EeCHH-HHhCCCChhhcCC
Confidence 12222221 244444444 4 999999766 557999998653 43332 11100 1146899
Q ss_pred cEEEEccccC----CCCCCCceEEEEEeCCCc
Q 035915 306 DFVLCNLDNT----QNAQPSKITCLLIRKKSF 333 (344)
Q Consensus 306 DFvv~S~HK~----l~G~P~GiG~L~Vr~~~~ 333 (344)
|.++.+++-+ -|||| +.|++-+|++..
T Consensus 261 DI~vG~~Q~fGvp~~~GGP-~ag~~a~~~~~~ 291 (954)
T PRK12566 261 DVVLGSTQRFGVPMGYGGP-HAAYFACRDDYK 291 (954)
T ss_pred cEEeeCCCcCCCCCCCCCC-CeeeeeehHHHH
Confidence 9999988763 27778 799999887543
No 326
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=95.62 E-value=0.8 Score=45.92 Aligned_cols=163 Identities=12% Similarity=0.034 Sum_probs=87.5
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh---CC---CC-CCCeEEE-cCCcC--HHHHHHHHHcC---
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES---YP---FF-RGNFYMT-IIGEE--LDYVREFASFK--- 221 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s---l~---~~-~Gd~ivS-~~eH~--~~~ir~la~~~--- 221 (344)
.....+..++++++++. + .|.|+.+++||+..++.. +. .. .++.|++ .-.+| ......+....
T Consensus 80 ~~~~~~la~~l~~~~~~--~--~v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~ 155 (406)
T PRK12381 80 NEPVLRLAKKLIDATFA--D--RVFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYS 155 (406)
T ss_pred CHHHHHHHHHHHhhCCC--C--eEEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccc
Confidence 33456677788887754 3 699999999987765543 21 01 2234543 22344 21111111000
Q ss_pred -C-----cEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEe-Cccc-cccc-cHHH---HH-HHHhCCcEEEecc
Q 035915 222 -E-----SKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYP-ADIN-GTRY-SMHW---IS-EAHRNSWHVLLDA 288 (344)
Q Consensus 222 -G-----~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~-avSN-G~i~-Pl~~---Ia-~ar~~g~~vlvDA 288 (344)
+ ..+..+|. -+.+.|++.+.+ +++.|.+. .+++ |.+. |.+. +. .|+++|+++++|=
T Consensus 156 ~~~~~~~~~~~~~~~------~d~~~l~~~l~~-----~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DE 224 (406)
T PRK12381 156 QDFAPLPPDIRHAAY------NDLNSASALIDD-----QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDE 224 (406)
T ss_pred cCCCCCCCCeeEeCC------CCHHHHHHhccC-----CeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcc
Confidence 0 01222222 145678877753 35555554 3334 6543 3443 33 3588999999999
Q ss_pred cccCcCCcc--C--CCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 289 TALVVGEDR--L--NLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 289 aQa~~G~~~--L--DLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+|.-.|..- + ......+|.+++| |. +|+=--+|+++.++++.+.
T Consensus 225 v~tG~gr~G~~~~~~~~~v~pDi~t~s--K~-l~gG~~ig~~~~~~~~~~~ 272 (406)
T PRK12381 225 VQTGVGRTGELYAYMHYGVTPDVLTTA--KA-LGGGFPIGAMLTTEKCASV 272 (406)
T ss_pred hhhCCCCCcchhhhHhhCCCCCEEEeh--hh-hhCCCceEEEEEcHHHHhh
Confidence 995113221 1 1223568986554 98 6511128999888776543
No 327
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=95.53 E-value=0.35 Score=49.29 Aligned_cols=164 Identities=15% Similarity=0.195 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHH--HHHhh---------CCCCCCCe--EEEc-CCcCHHHHHHHHHcCC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMM--LVGES---------YPFFRGNF--YMTI-IGEELDYVREFASFKE 222 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAln--lva~s---------l~~~~Gd~--ivS~-~eH~~~~ir~la~~~G 222 (344)
-+-++|+..|++||++++ +|+--.|.+=.|+ ++..+ -||...+. +++. -++.- =..+++..|
T Consensus 70 Gipe~r~l~a~llgv~~~--~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDR--HFai~E~~G 145 (425)
T PF12897_consen 70 GIPEARELFAELLGVPPE--NVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDR--HFAITEHFG 145 (425)
T ss_dssp --HHHHHHHHHHHTS-GG--GEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HH--HHHHHHHCT
T ss_pred ChHHHHHHHHHHhCCCHH--HEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchH--HHHHHHhhC
Confidence 578899999999999987 5776667654433 12222 25654433 4543 23321 122356789
Q ss_pred cEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccHHHHHHH-----HhCCcEEEecccccCcCC
Q 035915 223 SKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSMHWISEA-----HRNSWHVLLDATALVVGE 295 (344)
Q Consensus 223 ~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~a-----r~~g~~vlvDAaQa~~G~ 295 (344)
++.+.||.+.+ | .|.+.+++++..+ ..-+++.++|.-|| |..+.=+.+.++ ...+..++-|=|=++ -|
T Consensus 146 iemi~VpM~~d-G-PDmD~Ve~LV~~D--~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~v-Hh 220 (425)
T PF12897_consen 146 IEMIPVPMTED-G-PDMDMVEELVAED--PSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAV-HH 220 (425)
T ss_dssp -EEEEEEEETT-E-E-HHHHHHHTHTS--TTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT--B
T ss_pred cEEEecCCCCC-C-CCHHHHHHHHhcC--CccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceE-ee
Confidence 99999998864 4 4888899988532 12368999999888 999998877653 246777888877666 44
Q ss_pred cc--------CCC-----CCCCCc--EEEEccccCCCCCCCceEEEEEeC
Q 035915 296 DR--------LNL-----ALHRPD--FVLCNLDNTQNAQPSKITCLLIRK 330 (344)
Q Consensus 296 ~~--------LDL-----s~l~~D--Fvv~S~HK~l~G~P~GiG~L~Vr~ 330 (344)
.- +|+ +.-++| |+.+|.-|+-|.| .|++++-.++
T Consensus 221 L~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~G-aGva~~aaS~ 269 (425)
T PF12897_consen 221 LYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPG-AGVAFFAASE 269 (425)
T ss_dssp SSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TT-SS-EEEEE-H
T ss_pred ccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCC-cceeeeecCH
Confidence 41 111 012355 8889999983432 2666665543
No 328
>PRK12403 putative aminotransferase; Provisional
Probab=95.31 E-value=0.28 Score=50.53 Aligned_cols=75 Identities=15% Similarity=0.091 Sum_probs=48.6
Q ss_pred eeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEecccccCcCCccC----CCCCCCCcEEEEccccCCCC-C--C
Q 035915 255 KGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATALVVGEDRL----NLALHRPDFVLCNLDNTQNA-Q--P 320 (344)
Q Consensus 255 t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa~~G~~~L----DLs~l~~DFvv~S~HK~l~G-~--P 320 (344)
...|.+ +.+++ |.+.| ++.+.+ |+++|+++++|=+|.-.|..-- +.-...||++++ =|. +| | |
T Consensus 223 iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~--gK~-lggG~~P 299 (460)
T PRK12403 223 VAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLSI--AKG-LTSGYVP 299 (460)
T ss_pred eEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCCCCCeEEE--ccc-ccccccc
Confidence 433444 45554 88888 766654 6899999999999963243221 112356999984 577 44 2 5
Q ss_pred CceEEEEEeCCCcc
Q 035915 321 SKITCLLIRKKSFD 334 (344)
Q Consensus 321 ~GiG~L~Vr~~~~~ 334 (344)
+|+++++++..+
T Consensus 300 --iga~v~~~~i~~ 311 (460)
T PRK12403 300 --MGGLVLSKRIAE 311 (460)
T ss_pred --eEEEEECHHHHH
Confidence 788888876544
No 329
>PRK06541 hypothetical protein; Provisional
Probab=95.10 E-value=0.34 Score=49.94 Aligned_cols=88 Identities=11% Similarity=0.152 Sum_probs=55.4
Q ss_pred HHHHHHhhhcCCCCCeeEEEEe-Cccc-ccccc----HHHHHH-HHhCCcEEEecccc-cCcCCccCC--C--CCCCCcE
Q 035915 240 SQLSQYFRRKCKHTPKGLFSYP-ADIN-GTRYS----MHWISE-AHRNSWHVLLDATA-LVVGEDRLN--L--ALHRPDF 307 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~~-avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQ-a~~G~~~LD--L--s~l~~DF 307 (344)
+.+++.+... .......|.+. .+++ |.+.| ++.+.+ |+++|+++++|=+| .+ |..--- . -...||+
T Consensus 208 ~~l~~~l~~~-~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGf-GR~G~~~a~~~~gv~PDi 285 (460)
T PRK06541 208 DRIEEAIEFE-GPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAF-GRLGEMFGCERFGYVPDI 285 (460)
T ss_pred HHHHHHHHhc-CCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC-CcCchhhhhhhcCCCCCE
Confidence 4566666531 11234455554 3444 89888 666654 68999999999999 45 533211 1 2346998
Q ss_pred EEEccccCCCCC---CCceEEEEEeCCCcc
Q 035915 308 VLCNLDNTQNAQ---PSKITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~l~G~---P~GiG~L~Vr~~~~~ 334 (344)
+++ =|. +|+ | +|+++++++..+
T Consensus 286 vt~--gK~-l~~G~~p--igav~~~~~i~~ 310 (460)
T PRK06541 286 ITC--AKG-ITSGYSP--LGAMIASDRLFE 310 (460)
T ss_pred EEe--ccc-ccCCccc--eeEEEEcHHHHH
Confidence 875 587 553 5 899999876544
No 330
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=95.07 E-value=0.43 Score=48.87 Aligned_cols=88 Identities=13% Similarity=0.231 Sum_probs=55.7
Q ss_pred HHHHHHhhhcCCCCCeeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEecccc-cCcCCcc----CCCCCCCCcE
Q 035915 240 SQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATA-LVVGEDR----LNLALHRPDF 307 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQ-a~~G~~~----LDLs~l~~DF 307 (344)
++|++++... ...+...|.+ +.+++ |.+.| ++.+.+ |+++|+++++|=+| .+ |..- .+.....||+
T Consensus 202 ~~le~~l~~~-~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~-GrtG~~~a~~~~gv~PDi 279 (442)
T PRK13360 202 DELERLVTLH-DASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGF-GRLGAPFAAQYFGVTPDL 279 (442)
T ss_pred HHHHHHHHhc-CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC-CCCccchhhhhcCCCCce
Confidence 4667777531 1123444444 44444 99988 777755 68999999999999 45 5421 1222457998
Q ss_pred EEEccccCCCC---CCCceEEEEEeCCCcc
Q 035915 308 VLCNLDNTQNA---QPSKITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~l~G---~P~GiG~L~Vr~~~~~ 334 (344)
+++ =|. +| .| +|+++++++..+
T Consensus 280 vt~--gK~-l~gG~~P--~gav~~~~~i~~ 304 (442)
T PRK13360 280 LTC--AKG-LTNGAIP--MGAVFVSSEIHD 304 (442)
T ss_pred eee--eec-cccCccc--eEEEEEcHHHHH
Confidence 866 587 54 25 788888876543
No 331
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=95.00 E-value=0.58 Score=47.56 Aligned_cols=162 Identities=17% Similarity=0.068 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh-hCCCCCCCeEEEc-CCcC--HHHHHHHHHc----------CCc
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGE-SYPFFRGNFYMTI-IGEE--LDYVREFASF----------KES 223 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~-sl~~~~Gd~ivS~-~eH~--~~~ir~la~~----------~G~ 223 (344)
..+.-+++.+.+.. .+ .|.|+.++|||+..... +..+.....|++. -.+| ......+... .|+
T Consensus 95 ~~~la~~l~~~~p~-~~--~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~ 171 (428)
T PRK12389 95 EIEFAKMLKEAIPS-LE--KVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGV 171 (428)
T ss_pred HHHHHHHHHHhCCC-Cc--EEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCC
Confidence 34455555555531 22 79999999998776544 1122222345542 2244 2211111000 011
Q ss_pred ------EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEecccc
Q 035915 224 ------KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATA 290 (344)
Q Consensus 224 ------kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQ 290 (344)
.+..+|.+ +.+.+++.+... . .....|.+ +.+++ |.+.| ++.+.+ |+++|+++++|=+|
T Consensus 172 ~~~~~~~~~~~~~~------d~~~l~~~l~~~-~-~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~ 243 (428)
T PRK12389 172 PKSIAQEVITVPFN------DIEALKEALDKW-G-DEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVI 243 (428)
T ss_pred CCcccCceEEcCCC------CHHHHHHHHHhc-C-CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccc
Confidence 11112211 457787777532 1 23444444 45555 98888 766654 68999999999999
Q ss_pred cCcCCccC---CCCCCCCcEEEEccccCCCCC--CCceEEEEEeCCCccc
Q 035915 291 LVVGEDRL---NLALHRPDFVLCNLDNTQNAQ--PSKITCLLIRKKSFDT 335 (344)
Q Consensus 291 a~~G~~~L---DLs~l~~DFvv~S~HK~l~G~--P~GiG~L~Vr~~~~~~ 335 (344)
.-...... ..-...||++++ =|. +|+ | +|++.++++..+.
T Consensus 244 tG~Rt~~~~a~~~~gv~PDivt~--gK~-lggG~P--i~av~~~~~i~~~ 288 (428)
T PRK12389 244 TAFRFMYGGAQDLLGVEPDLTAL--GKI-IGGGLP--IGAYGGRKDIMEQ 288 (428)
T ss_pred cccccCcchhhHHhCCCCCeeee--chh-hcCCCc--eeEEeEHHHHHhh
Confidence 84122111 111346998766 476 442 4 8889888776543
No 332
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=94.99 E-value=0.34 Score=49.69 Aligned_cols=89 Identities=11% Similarity=0.196 Sum_probs=54.7
Q ss_pred HHHHHHhhhcCCCCCeeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEeccccc-CcCCc--c--CCCCCCCCcE
Q 035915 240 SQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATAL-VVGED--R--LNLALHRPDF 307 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa-~~G~~--~--LDLs~l~~DF 307 (344)
+++++.+... ...+...|.+ +.+++ |.+.| ++.+.+ |+++|+++++|=+|. + |.. . .+.....||+
T Consensus 205 ~~l~~~i~~~-~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~-GRtG~~~~~~~~gv~PDi 282 (445)
T PRK09221 205 DDLERLVALH-DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGF-GRLGAAFAAERFGVTPDI 282 (445)
T ss_pred HHHHHHHHhc-CCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCC-CcCchhhHHHhcCCCCCE
Confidence 4566666531 1123444444 44454 99998 776654 689999999999995 4 531 1 1222356898
Q ss_pred EEEccccCCC-C-CCCceEEEEEeCCCcc
Q 035915 308 VLCNLDNTQN-A-QPSKITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~l~-G-~P~GiG~L~Vr~~~~~ 334 (344)
++++ |.|- | .| +|+++++++..+
T Consensus 283 ~~~g--K~l~gG~~P--i~av~~~~~i~~ 307 (445)
T PRK09221 283 ITFA--KGLTNGAIP--MGAVIASDEIYD 307 (445)
T ss_pred EEec--cccccCccc--ceeeEEcHHHHH
Confidence 8775 5512 2 25 788888876544
No 333
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=94.82 E-value=1.9 Score=44.19 Aligned_cols=76 Identities=12% Similarity=0.170 Sum_probs=48.2
Q ss_pred CeeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEeccccc-CcCCcc----CCCCCCCCcEEEEccccCCCC--C
Q 035915 254 PKGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATAL-VVGEDR----LNLALHRPDFVLCNLDNTQNA--Q 319 (344)
Q Consensus 254 ~t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa-~~G~~~----LDLs~l~~DFvv~S~HK~l~G--~ 319 (344)
.+..|.+ +.+++ |.+.| ++.+.+ |+++|+++++|=+|. + |..- .+.-...||++++ =|. +| .
T Consensus 207 ~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~-GrtG~~~a~~~~gv~pDi~t~--gK~-l~~G~ 282 (445)
T PRK08593 207 EVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGL-GRTGKWSSISHFNITPDLMSF--GKS-LAGGM 282 (445)
T ss_pred ceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCC-CcCchHHHHHhcCCCCCEeee--ccc-ccCCc
Confidence 3545554 44444 88766 555544 689999999999984 4 5321 1112346898876 466 44 2
Q ss_pred CCceEEEEEeCCCccc
Q 035915 320 PSKITCLLIRKKSFDT 335 (344)
Q Consensus 320 P~GiG~L~Vr~~~~~~ 335 (344)
| +|+++.+++..+.
T Consensus 283 p--~gav~~~~~i~~~ 296 (445)
T PRK08593 283 P--MSAIVGRKEIMES 296 (445)
T ss_pred c--cEEEEEcHHHHhh
Confidence 4 8889988776543
No 334
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=94.71 E-value=0.28 Score=52.77 Aligned_cols=161 Identities=15% Similarity=0.097 Sum_probs=98.7
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHH-----HHHHHHhhCCCCCCC--e---EEEcCCcCHHHHHHHHHcCCcEEEE
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRD-----AMMLVGESYPFFRGN--F---YMTIIGEELDYVREFASFKESKVIL 227 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTe-----Alnlva~sl~~~~Gd--~---ivS~~eH~~~~ir~la~~~G~kV~~ 227 (344)
+.+..+.+...-|-+ .+.|-+|.-. ++ .++++|...+|+ . ++...-|..|... |.-.|.+|+.
T Consensus 584 f~~Le~~Lc~iTG~D----~~s~QPNsGA~GEYaGL-~~IRaY~~~kge~hRnvClIPvSAHGTNPAS--A~Magmkvvp 656 (1001)
T KOG2040|consen 584 FTELEKDLCEITGFD----SFSLQPNSGAQGEYAGL-RVIRAYLESKGEGHRNVCLIPVSAHGTNPAS--AAMAGMKVVP 656 (1001)
T ss_pred HHHHHHHhheeeccc----ceeecCCCCcccchhhH-HHHHHHHHhccCCcceeEEEeecccCCChhh--HHhcCCEEEE
Confidence 455555666666653 5888876543 23 345666444443 2 2322234444321 2335999999
Q ss_pred EeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeC--ccc-ccccc-HHH-HHHHHhCCcEEEecccccCcCCccC-CCC
Q 035915 228 APEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPA--DIN-GTRYS-MHW-ISEAHRNSWHVLLDATALVVGEDRL-NLA 301 (344)
Q Consensus 228 vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~a--vSN-G~i~P-l~~-Ia~ar~~g~~vlvDAaQa~~G~~~L-DLs 301 (344)
+..+. +|.|+..+|+....... ..|.+++. -|+ |+--+ ++. +..+|++|-.|.+|+|-.= .+.-| .-.
T Consensus 657 V~~~~-~G~id~~dLk~kaekh~----~~Laa~MvTYPST~GvfE~~i~d~cd~iHehGGQVYlDGANMN-AqVGlc~pG 730 (1001)
T KOG2040|consen 657 VGCDA-NGNIDMVDLKAKAEKHK----DNLAALMVTYPSTHGVFEEGIDDICDIIHEHGGQVYLDGANMN-AQVGLCRPG 730 (1001)
T ss_pred eeccC-CCCccHHHHHHHHHHhh----hhhheeEEecccccccccccHHHHHHHHHhcCCEEEecCCCcc-ceecccCCc
Confidence 98887 58999999988776532 23444442 244 76543 444 4567999999999999764 32221 123
Q ss_pred CCCCcEEEEccccCCCCCCC-----ceEEEEEeCCC
Q 035915 302 LHRPDFVLCNLDNTQNAQPS-----KITCLLIRKKS 332 (344)
Q Consensus 302 ~l~~DFvv~S~HK~l~G~P~-----GiG~L~Vr~~~ 332 (344)
+.+.|.--.++||. |+-|- |+|=+-|++.+
T Consensus 731 d~GaDV~HLNLHKT-FcIPHGGGGPg~gPIgVK~HL 765 (1001)
T KOG2040|consen 731 DIGADVCHLNLHKT-FCIPHGGGGPGMGPIGVKKHL 765 (1001)
T ss_pred cccccceeecccce-eeecCCCCCCCCCccchhhhc
Confidence 57899999999998 64333 66666666543
No 335
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=94.53 E-value=0.77 Score=47.67 Aligned_cols=88 Identities=14% Similarity=0.124 Sum_probs=55.8
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEE-eCccc-cccccH-H---HHH-HHHhCCcEEEecccccCcCCccCCC------CCCC
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYSM-H---WIS-EAHRNSWHVLLDATALVVGEDRLNL------ALHR 304 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~Pl-~---~Ia-~ar~~g~~vlvDAaQa~~G~~~LDL------s~l~ 304 (344)
+.+.|++.+... ......|.+ +.+++ |.+.|. + .+. .|+++|+++++|=+|. |- +... -...
T Consensus 232 d~~~l~~~l~~~--~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t--Gf-R~g~~ga~~~~gv~ 306 (474)
T PLN02482 232 DLEAVKKLFEAN--KGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT--GF-RIAYGGAQEYFGIT 306 (474)
T ss_pred ChHHHHHHHHhC--CCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc--Ce-ecCcchHhHHhCCC
Confidence 456788777532 123444444 45556 888885 3 343 3588999999999994 43 2221 1246
Q ss_pred CcEEEEccccCCCCC--CCceEEEEEeCCCccc
Q 035915 305 PDFVLCNLDNTQNAQ--PSKITCLLIRKKSFDT 335 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~--P~GiG~L~Vr~~~~~~ 335 (344)
||.+++ =|. +|+ | +|++..++++.+.
T Consensus 307 PDi~t~--gK~-lggG~P--igav~g~~ei~~~ 334 (474)
T PLN02482 307 PDLTTL--GKV-IGGGLP--VGAYGGRREIMEM 334 (474)
T ss_pred CCEEEe--cch-hhCCCc--eEEEEEcHHHHHh
Confidence 998776 587 553 5 8999888776543
No 336
>PRK07678 aminotransferase; Validated
Probab=94.52 E-value=0.73 Score=47.29 Aligned_cols=86 Identities=10% Similarity=0.185 Sum_probs=52.1
Q ss_pred HHHHhhhcCCCCCeeEEEE-eCccc-cccccH----HHHHH-HHhCCcEEEeccccc-CcCCcc----CCCCCCCCcEEE
Q 035915 242 LSQYFRRKCKHTPKGLFSY-PADIN-GTRYSM----HWISE-AHRNSWHVLLDATAL-VVGEDR----LNLALHRPDFVL 309 (344)
Q Consensus 242 L~~~l~~~~~~~~t~LVa~-~avSN-G~i~Pl----~~Ia~-ar~~g~~vlvDAaQa-~~G~~~----LDLs~l~~DFvv 309 (344)
+++.|.... ..+..-|.+ |.+.+ |.+.|- +.+.+ |+++|+++++|=+|. + |..- .+--...||+++
T Consensus 202 l~~~~~~~~-~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGf-GRtG~~~~~~~~gv~PDivt 279 (451)
T PRK07678 202 IDRVMTWEL-SETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGF-GRTGKAFGFMNYGVKPDIIT 279 (451)
T ss_pred HHHHHHhcC-CCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcC-CcCchhHHHHhcCCCCCEEE
Confidence 455564211 123433333 55555 888773 34433 588999999999995 5 5421 121235699998
Q ss_pred EccccCCCCC---CCceEEEEEeCCCcc
Q 035915 310 CNLDNTQNAQ---PSKITCLLIRKKSFD 334 (344)
Q Consensus 310 ~S~HK~l~G~---P~GiG~L~Vr~~~~~ 334 (344)
+ =|. +|+ | +|++.+++++.+
T Consensus 280 ~--gK~-lggG~~P--i~av~~~~~i~~ 302 (451)
T PRK07678 280 M--AKG-ITSAYLP--LSATAVKKEIYE 302 (451)
T ss_pred e--ecc-cccCCcc--eeEEEEcHHHHH
Confidence 8 476 442 6 899999887654
No 337
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=94.45 E-value=2.3 Score=43.18 Aligned_cols=172 Identities=9% Similarity=0.031 Sum_probs=85.0
Q ss_pred HHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh-CCCCCCCeEEEcC-CcC--HHHHHHHH-----HcCCc-----EE
Q 035915 160 QARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES-YPFFRGNFYMTII-GEE--LDYVREFA-----SFKES-----KV 225 (344)
Q Consensus 160 ~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s-l~~~~Gd~ivS~~-eH~--~~~ir~la-----~~~G~-----kV 225 (344)
+.-+++++++... ....++|+.++|||+...+.- ..+.....|++.. .+| ......+. .+.+. .+
T Consensus 87 ~la~~l~~~~p~~-~~~~~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~ 165 (421)
T PRK09792 87 TLAEKINALAPVS-GQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSV 165 (421)
T ss_pred HHHHHHHHhCCCC-CCceEEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCc
Confidence 3334456665421 123799999999987754431 1122223455433 244 21111110 01111 13
Q ss_pred EEEeCCCCCCcc----CHHHHHHHhhhcCCCCCeeEEEE-eCccc-cccc-cH---HHHHH-HHhCCcEEEecccccCcC
Q 035915 226 ILAPEAWLDLRI----KGSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRY-SM---HWISE-AHRNSWHVLLDATALVVG 294 (344)
Q Consensus 226 ~~vp~~~~~g~i----~~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~-Pl---~~Ia~-ar~~g~~vlvDAaQa~~G 294 (344)
..+|.......+ +.+.+++.+.......+...|.+ +.+++ |.+. |- +.+.+ |+++|+++++|=+|.-.|
T Consensus 166 ~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~g 245 (421)
T PRK09792 166 YHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFA 245 (421)
T ss_pred EEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCC
Confidence 333432110011 23567776652111123445554 44444 7665 64 44433 588999999999988324
Q ss_pred Ccc--CCCC--CCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 295 EDR--LNLA--LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 295 ~~~--LDLs--~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
..- +-+. ...+|++++ =|. +++=--+|+++.++++.+.
T Consensus 246 r~G~~~a~~~~~~~pDi~t~--gK~-l~~G~pigav~~~~~i~~~ 287 (421)
T PRK09792 246 RTGKLFAMDHYADKPDLMTM--AKS-LAGGMPLSGVVGNANIMDA 287 (421)
T ss_pred CCCchhHHHhcCCCCcEEEe--ehh-hcCCCceEEEEEcHHHHhc
Confidence 321 1112 246897655 687 5421238999988776543
No 338
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=94.42 E-value=1.5 Score=44.73 Aligned_cols=78 Identities=13% Similarity=0.066 Sum_probs=49.2
Q ss_pred eeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEecccccCcCCcc----CCCCCCCCcEEEEccccCCCCCCCce
Q 035915 255 KGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATALVVGEDR----LNLALHRPDFVLCNLDNTQNAQPSKI 323 (344)
Q Consensus 255 t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DFvv~S~HK~l~G~P~Gi 323 (344)
+..|.+ +.+.+ |.+.| ++.+.+ |+++|+++++|=+|.-.|..- .+.-...||.++++ |. +|+=--+
T Consensus 220 iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv~PDiv~~g--K~-l~~G~Pi 296 (443)
T PRK06058 220 LAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGIVPDLITTA--KG-IAGGLPL 296 (443)
T ss_pred eEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCCCCCEEEEc--cc-ccCCCcc
Confidence 444444 44445 77765 455543 589999999999987214221 12223569999997 98 5520128
Q ss_pred EEEEEeCCCccc
Q 035915 324 TCLLIRKKSFDT 335 (344)
Q Consensus 324 G~L~Vr~~~~~~ 335 (344)
|+++.+++..+.
T Consensus 297 ~av~~~~~i~~~ 308 (443)
T PRK06058 297 SAVTGRAEIMDA 308 (443)
T ss_pred EEEEEcHHHHhh
Confidence 999998876554
No 339
>PRK07480 putative aminotransferase; Validated
Probab=94.25 E-value=0.83 Score=47.05 Aligned_cols=73 Identities=11% Similarity=0.133 Sum_probs=48.1
Q ss_pred EEEEeCccc-ccccc----HHHHHH-HHhCCcEEEeccccc-CcCCcc----CCCCCCCCcEEEEccccCCCCC---CCc
Q 035915 257 LFSYPADIN-GTRYS----MHWISE-AHRNSWHVLLDATAL-VVGEDR----LNLALHRPDFVLCNLDNTQNAQ---PSK 322 (344)
Q Consensus 257 LVa~~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa-~~G~~~----LDLs~l~~DFvv~S~HK~l~G~---P~G 322 (344)
++.=|.+.+ |.+.| ++.+.+ |+++|+++++|=+|. + |..- .+.-...||++++ =|. +++ |
T Consensus 223 vi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGf-GRtG~~~a~~~~gv~PDiv~~--gK~-l~gG~~P-- 296 (456)
T PRK07480 223 FIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGF-GRTGEWFGSQHFGIKPDLMTI--AKG-LTSGYIP-- 296 (456)
T ss_pred EEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCC-CcCcchhhhhhcCCCCCeeee--ehh-hccCCcc--
Confidence 333355555 88877 455544 689999999999996 4 5322 1222457999887 476 442 5
Q ss_pred eEEEEEeCCCccc
Q 035915 323 ITCLLIRKKSFDT 335 (344)
Q Consensus 323 iG~L~Vr~~~~~~ 335 (344)
+|+++++++..+.
T Consensus 297 i~av~~~~~i~~~ 309 (456)
T PRK07480 297 MGAVGVGDRVAEV 309 (456)
T ss_pred ceEEEEcHHHHHH
Confidence 8999998876543
No 340
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=94.19 E-value=0.64 Score=47.45 Aligned_cols=161 Identities=11% Similarity=0.034 Sum_probs=90.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh---hCCCCC-CCeEEEcCC--cC------HHHHHH-HHHcCC-
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGE---SYPFFR-GNFYMTIIG--EE------LDYVRE-FASFKE- 222 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~---sl~~~~-Gd~ivS~~e--H~------~~~ir~-la~~~G- 222 (344)
..++.-+.++++.+ ..+ .|.|..++|||+..++. -+...+ ..+|++... |. +.+++. +.+..+
T Consensus 85 ~~~~la~~L~~~s~-~~d--~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~P 161 (404)
T COG4992 85 PQAELAEKLVELSP-FAD--RVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGP 161 (404)
T ss_pred HHHHHHHHHHhhCc-ccc--EEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCC
Confidence 33445555666665 333 79999999999876544 222111 224543322 22 112222 111111
Q ss_pred --cEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccH-HHHH---H-HHhCCcEEEecccccCc
Q 035915 223 --SKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSM-HWIS---E-AHRNSWHVLLDATALVV 293 (344)
Q Consensus 223 --~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl-~~Ia---~-ar~~g~~vlvDAaQa~~ 293 (344)
-.+..+|.+ |.+.+++++++ .|.-|.+--+.. |++.|- +.+. + |+++|+++++|=+|.=+
T Consensus 162 l~~g~~~vpfn------Di~al~~ai~~-----~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~ 230 (404)
T COG4992 162 LLPGFRHVPFN------DIEALEAAIDE-----DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGL 230 (404)
T ss_pred CCCCceecCCC------CHHHHHHHhcc-----CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCC
Confidence 124455654 46789999986 355555543443 777765 4443 2 57899999999999843
Q ss_pred CCcc----CCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 294 GEDR----LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 294 G~~~----LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
|..- .......||.++. =|- +|+=--+|++++++...+
T Consensus 231 GRTGk~fA~e~~gV~PDI~tl--aK~-LgGG~PigA~la~~~~~~ 272 (404)
T COG4992 231 GRTGKLFAYEHYGVEPDILTL--AKA-LGGGFPIGAMLATEEIAS 272 (404)
T ss_pred CccchHHHHHHhCCCCCEEEe--ecc-ccCCccceeeEEchhhhh
Confidence 4321 1122456998876 477 444244999999855444
No 341
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=94.19 E-value=0.49 Score=48.24 Aligned_cols=148 Identities=14% Similarity=0.061 Sum_probs=88.3
Q ss_pred ccchHHHHHHhhccCCCChhhh-hhHHHHHHHHHHHHHcC------CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE
Q 035915 132 TQLEPSRLLDILTKKSSFPGSF-ISIPEIQARNKVLKHCG------LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM 204 (344)
Q Consensus 132 v~~~~~~L~~~L~gnss~~g~~-as~~le~AR~~IA~~Lg------a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv 204 (344)
+...+.++++..-| +.|+. .+.-++-.|+.||+|+- ++|+ +|.+|.||+.|++.++.-+--.+.+-++
T Consensus 91 ai~RA~~~L~~~gG---s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~--dI~LT~GAS~ai~~il~l~~~~~~~Gvl 165 (475)
T KOG0258|consen 91 AIKRAKRILNDCGG---SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPE--DIFLTTGASPAIRSILSLLIAGKKTGVL 165 (475)
T ss_pred HHHHHHHHHHhcCC---cccccccccCChhHHHHHHHHHHhccCCCCCHH--HeeecCCCcHHHHHHHHHHhcCCCCceE
Confidence 44445666654444 33333 23456778999999985 3454 7999999999999888765433444465
Q ss_pred EcC-CcC--HHHHHHHHHcCCcEEEE-EeC--CCCCCccCHHHHHHHhhhcCCCCCe-eEEEEeCcc-ccccccHHHHHH
Q 035915 205 TII-GEE--LDYVREFASFKESKVIL-APE--AWLDLRIKGSQLSQYFRRKCKHTPK-GLFSYPADI-NGTRYSMHWISE 276 (344)
Q Consensus 205 S~~-eH~--~~~ir~la~~~G~kV~~-vp~--~~~~g~i~~~~L~~~l~~~~~~~~t-~LVa~~avS-NG~i~Pl~~Ia~ 276 (344)
..+ -++ +..+.. ..+..|-+ +.. +| .++.++|++.+....+.-+. .||++.--| +|..+.-+-|..
T Consensus 166 iPiPQYPLYsAti~l---~~~~~v~YyLdEe~~W---~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~ 239 (475)
T KOG0258|consen 166 IPIPQYPLYSATISL---LGGTQVPYYLDEESNW---SLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEG 239 (475)
T ss_pred eecCCCchhHHHHHH---hCCcccceeeccccCC---CCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHH
Confidence 443 355 223322 22444444 433 45 36788898887653333333 444443333 498887765543
Q ss_pred ----HHhCCcEEEecccc
Q 035915 277 ----AHRNSWHVLLDATA 290 (344)
Q Consensus 277 ----ar~~g~~vlvDAaQ 290 (344)
|++.|..++-|=+.
T Consensus 240 i~~fa~~~~l~llaDEVY 257 (475)
T KOG0258|consen 240 IICFAAEEGLVLLADEVY 257 (475)
T ss_pred HHHHHHHcCeEEechHHH
Confidence 47889988888653
No 342
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=94.18 E-value=3.4 Score=42.12 Aligned_cols=175 Identities=8% Similarity=-0.041 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh-CCCCCCCeEEEcC-CcC--HHHHHHH-----HHcCCc----
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES-YPFFRGNFYMTII-GEE--LDYVREF-----ASFKES---- 223 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s-l~~~~Gd~ivS~~-eH~--~~~ir~l-----a~~~G~---- 223 (344)
...+.-+++++++.-... ..|.|+.++|||+...+.- ..+.....|++.. .+| ......+ ..+.+.
T Consensus 84 ~~~~la~~l~~~~p~~~~-~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~ 162 (425)
T PRK07495 84 NYVRLAERLNALVPGDFA-KKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMM 162 (425)
T ss_pred HHHHHHHHHHHhCCCCCC-CEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCC
Confidence 344455556666642211 2799999999987654431 1122223455432 234 1111111 011111
Q ss_pred -EEEEEeCCCCCCccC----HHHHHHHhhhcCCCCCeeEEEE-eCccc-cccc-cHHHH---H-HHHhCCcEEEeccccc
Q 035915 224 -KVILAPEAWLDLRIK----GSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRY-SMHWI---S-EAHRNSWHVLLDATAL 291 (344)
Q Consensus 224 -kV~~vp~~~~~g~i~----~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~-Pl~~I---a-~ar~~g~~vlvDAaQa 291 (344)
.+..+|.......++ .+.+++.+.......+...|.+ |.+.| |.+. |-+.+ . .|+++|+++++|=+|.
T Consensus 163 ~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 242 (425)
T PRK07495 163 PDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQT 242 (425)
T ss_pred CCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhh
Confidence 233444432110111 3344665542111123444444 45556 7554 44433 3 3578999999999987
Q ss_pred CcCCcc----CCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 292 VVGEDR----LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 292 ~~G~~~----LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
-.|... .+.....||++++ =|. +++---+|++..+++..+.
T Consensus 243 G~gr~G~~~a~~~~gv~pDi~tl--sK~-l~~G~pigav~~~~~i~~~ 287 (425)
T PRK07495 243 GFARTGKLFAMEHHEVAADLTTM--AKG-LAGGFPLAAVTGRAEIMDA 287 (425)
T ss_pred cCCcCCCceeecccCCCCCEEee--hhh-hcCCccceEEEEcHHHHhc
Confidence 214332 1212346888776 477 4421128999988776543
No 343
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=94.04 E-value=0.72 Score=47.51 Aligned_cols=112 Identities=16% Similarity=0.168 Sum_probs=75.5
Q ss_pred CCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcC-HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcC---
Q 035915 175 EYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEE-LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKC--- 250 (344)
Q Consensus 175 ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~-~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~--- 250 (344)
+++|+.|.|.|.|+-.+.+.+ ..+|+.++... |- ..++.. .+..|++++.|+.|.+ | ++.+.|++.++...
T Consensus 124 ~wdiiit~G~t~~l~~~l~~~-~N~gd~vlie~-~ty~~AL~s-~~a~gv~~ipv~md~~-G-i~pE~l~~il~~w~~~~ 198 (472)
T KOG0634|consen 124 NWDIIITNGNTDGLFKVLRTL-INRGDHVLIEE-YTYPSALQS-MEALGVKIIPVKMDQD-G-IDPESLEEILSNWKPGS 198 (472)
T ss_pred CceEEEecCCchHHHHHHHHh-hcCCCceEEec-ccchHHHHh-ccccCceEEeccccCC-C-CCHHHHHHHHhcCCccc
Confidence 458999999999999998876 45777765432 22 222333 2446888877777653 4 78899988875321
Q ss_pred --CCCCeeEEEEeCccc--cccccHHHH----HHHHhCCcEEEeccccc
Q 035915 251 --KHTPKGLFSYPADIN--GTRYSMHWI----SEAHRNSWHVLLDATAL 291 (344)
Q Consensus 251 --~~~~t~LVa~~avSN--G~i~Pl~~I----a~ar~~g~~vlvDAaQa 291 (344)
+..+.-|-+++.-.| |..++++.- ..||+++.+++-|=.=.
T Consensus 199 ~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy 247 (472)
T KOG0634|consen 199 YKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYY 247 (472)
T ss_pred ccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccc
Confidence 112345777775445 999999643 35689999998875443
No 344
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=93.78 E-value=2.1 Score=44.15 Aligned_cols=195 Identities=14% Similarity=0.131 Sum_probs=97.2
Q ss_pred cCCCCCCcccccchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh-CCCCCC
Q 035915 122 FGSNLPDLDRTQLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES-YPFFRG 200 (344)
Q Consensus 122 ~Ga~lp~~s~v~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s-l~~~~G 200 (344)
+|=.-|. .+++..+.+....+..+ ........+.-++++++++...+ .|.|++++|||+..+..- ..+...
T Consensus 85 lGh~~p~--v~~Ai~~ql~~~~~~~~----~~~~~~~~~lae~L~~~~p~~~~--~v~f~~sGseAve~AlklAr~~tgr 156 (459)
T PRK06082 85 LGYGHPH--VIEKVKEQMAKLPFSPR----RFTNETAIECAEKLTEIAGGELN--RVLFAPGGTSAIGMALKLARHITGN 156 (459)
T ss_pred cCCCCHH--HHHHHHHHHHhCCCccC----ccCCHHHHHHHHHHHHhCCCCCC--EEEECCCcHHHHHHHHHHHHHhcCC
Confidence 5644354 45555555544222111 23344455666677777753222 799999999987764431 111222
Q ss_pred CeEEEcCC--cC-H-HHHHHHHH----cCC-----cEEEEEeCCC------CCCc----cCHHHHHHHhhhcCCCCCeeE
Q 035915 201 NFYMTIIG--EE-L-DYVREFAS----FKE-----SKVILAPEAW------LDLR----IKGSQLSQYFRRKCKHTPKGL 257 (344)
Q Consensus 201 d~ivS~~e--H~-~-~~ir~la~----~~G-----~kV~~vp~~~------~~g~----i~~~~L~~~l~~~~~~~~t~L 257 (344)
..+++..+ |. . .++. +.. +.+ ..+..+|... .+.. -+.++|++.+... .....
T Consensus 157 ~~ii~~~~~yHG~t~~a~s-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~---~~vAa 232 (459)
T PRK06082 157 FKVVSLWDSFHGASLDAIS-VGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKE---GGIGA 232 (459)
T ss_pred CEEEEEeCCCcCccHHHHh-hcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcC---CCEEE
Confidence 44554322 33 2 1221 110 000 1122333210 0000 0123466666531 23444
Q ss_pred EEE-eCccccc-ccc---HHHHHH-HHhCCcEEEecccccCcCCcc-C---CCCCCCCcEEEEccccCCCCC---CCceE
Q 035915 258 FSY-PADINGT-RYS---MHWISE-AHRNSWHVLLDATALVVGEDR-L---NLALHRPDFVLCNLDNTQNAQ---PSKIT 324 (344)
Q Consensus 258 Va~-~avSNG~-i~P---l~~Ia~-ar~~g~~vlvDAaQa~~G~~~-L---DLs~l~~DFvv~S~HK~l~G~---P~GiG 324 (344)
|.+ +.++.|. ..| ++.+.+ |+++|+++++|=+|.-.|..- . ..-...||++++ =|. +|+ | +|
T Consensus 233 vIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv~PDiv~~--gKg-l~gG~~P--~~ 307 (459)
T PRK06082 233 FIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGIEPDILCI--GKG-LGGGLVP--IA 307 (459)
T ss_pred EEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCCCCCEEEe--ccc-ccCCCCc--ce
Confidence 444 3333454 455 445544 589999999999988324321 1 122356999985 687 443 5 78
Q ss_pred EEEEeCCCc
Q 035915 325 CLLIRKKSF 333 (344)
Q Consensus 325 ~L~Vr~~~~ 333 (344)
+++++++..
T Consensus 308 av~~~~~i~ 316 (459)
T PRK06082 308 AMITKDKYN 316 (459)
T ss_pred EEEEcHHHH
Confidence 888887654
No 345
>PRK07481 hypothetical protein; Provisional
Probab=93.64 E-value=1.3 Score=45.35 Aligned_cols=77 Identities=14% Similarity=0.171 Sum_probs=48.3
Q ss_pred eeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEecccccCcCCcc----CCCCCCCCcEEEEccccCCCCC--CC
Q 035915 255 KGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATALVVGEDR----LNLALHRPDFVLCNLDNTQNAQ--PS 321 (344)
Q Consensus 255 t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DFvv~S~HK~l~G~--P~ 321 (344)
...|.+ +.+.+ |.+.| ++.+.+ |+++|+++++|=+|.-.|..- .+.-...||+++++ |.|-|| |
T Consensus 214 iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~g--Kgl~gG~~P- 290 (449)
T PRK07481 214 IAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLA--KGITSGYVP- 290 (449)
T ss_pred EEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEEe--ecccCCCcC-
Confidence 444444 44444 88766 344443 588999999999988215321 12234579999884 762322 5
Q ss_pred ceEEEEEeCCCccc
Q 035915 322 KITCLLIRKKSFDT 335 (344)
Q Consensus 322 GiG~L~Vr~~~~~~ 335 (344)
+|+++++++..+.
T Consensus 291 -i~av~~~~~i~~~ 303 (449)
T PRK07481 291 -LGATMVNARIADA 303 (449)
T ss_pred -ceEEEEcHHHHHH
Confidence 8999998876543
No 346
>PLN00144 acetylornithine transaminase
Probab=93.53 E-value=1.9 Score=43.05 Aligned_cols=91 Identities=13% Similarity=0.154 Sum_probs=54.3
Q ss_pred CHHHHHHHhhhcCCCCCee-EEEEeCcccccccc-----HHHHH-HHHhCCcEEEecccccCcCCcc----CCCCCCCCc
Q 035915 238 KGSQLSQYFRRKCKHTPKG-LFSYPADINGTRYS-----MHWIS-EAHRNSWHVLLDATALVVGEDR----LNLALHRPD 306 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~-LVa~~avSNG~i~P-----l~~Ia-~ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~D 306 (344)
+.+.|++.+.+ .+.. ++.-|.+++|..++ ++.+. .|+++|+++++|=+|.-.|... .++....||
T Consensus 155 d~~~l~~~~~~----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD 230 (382)
T PLN00144 155 NLEAARKLIQK----GKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD 230 (382)
T ss_pred CHHHHHHhcCC----CCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC
Confidence 45677777743 1344 44445543444444 33343 3588999999999987324332 124456799
Q ss_pred EEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 307 FVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 307 Fvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
.+++ =|. +++=--+|+++++++..+.
T Consensus 231 i~t~--sK~-l~~G~pig~v~~~~~~~~~ 256 (382)
T PLN00144 231 IMTL--AKP-LAGGLPIGAVLVTEKVASA 256 (382)
T ss_pred EEEe--ccc-ccCCcceEEEEEcHHHHhc
Confidence 5555 688 4411238999998776654
No 347
>PRK07046 aminotransferase; Validated
Probab=93.52 E-value=1.5 Score=45.23 Aligned_cols=161 Identities=13% Similarity=0.050 Sum_probs=88.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh-CCCCCCCeEEEcCC-cC--HH-HHHHHHH-----cC---C
Q 035915 156 IPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES-YPFFRGNFYMTIIG-EE--LD-YVREFAS-----FK---E 222 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s-l~~~~Gd~ivS~~e-H~--~~-~ir~la~-----~~---G 222 (344)
....+.-+++.+.+++ + .|.|+.++|||.....+- ..+...+.|++..+ +| .+ .+-.... +. |
T Consensus 115 ~~~~~lAe~l~~~~~~--~--~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g 190 (453)
T PRK07046 115 EDAAWVGEELARRFGL--P--YWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLG 190 (453)
T ss_pred HHHHHHHHHHHHHhCC--C--EEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCC
Confidence 3444555566666653 3 699999999987764431 11222344554322 33 22 1111100 00 1
Q ss_pred c------EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEE-eCccc-cccccH----HHHHH-HHhCCcEEEeccc
Q 035915 223 S------KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYSM----HWISE-AHRNSWHVLLDAT 289 (344)
Q Consensus 223 ~------kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~Pl----~~Ia~-ar~~g~~vlvDAa 289 (344)
. .+..+|.+ +.+++++.+.. .+...|.+ +.+.+ |.+.|- +.+.+ |+++|+++++|=+
T Consensus 191 ~~~~~~~~~~~~~~n------d~~~l~~~l~~----~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV 260 (453)
T PRK07046 191 QVHDLTATTRVVEFN------DLAALEAALAD----GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDET 260 (453)
T ss_pred CCccccCceEeeCCC------CHHHHHHHhCC----CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcc
Confidence 1 11112221 46778877742 13444444 45555 888773 44543 6889999999999
Q ss_pred cc----CcCCccCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 290 AL----VVGEDRLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 290 Qa----~~G~~~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
|. . |-.. ..-...||++++ =|. +|+=--+|++..|++..+.
T Consensus 261 ~tfr~g~-Gg~~-~~~gv~PDi~t~--gK~-lggG~Pi~av~g~~~i~~~ 305 (453)
T PRK07046 261 HTISSGP-GGYT-RAHGLEPDFLVV--GKP-IAGGVPCAVYGFSAELAER 305 (453)
T ss_pred ccCccCC-cchh-HHhCCCccceee--hhh-hcCCCcceeeeehHHHHHH
Confidence 95 3 3221 112357999986 576 4321228999998876554
No 348
>PRK07036 hypothetical protein; Provisional
Probab=93.35 E-value=1.7 Score=44.82 Aligned_cols=75 Identities=16% Similarity=0.184 Sum_probs=49.8
Q ss_pred CeeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEeccccc-CcCCcc--CCC---CCCCCcEEEEccccCCCCC-
Q 035915 254 PKGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATAL-VVGEDR--LNL---ALHRPDFVLCNLDNTQNAQ- 319 (344)
Q Consensus 254 ~t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa-~~G~~~--LDL---s~l~~DFvv~S~HK~l~G~- 319 (344)
+...|.+ |.+.+ |.+.| ++.+.+ |+++|+++++|=+|. + |..- +-. -...||+++++ |. +|+
T Consensus 220 ~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGf-GRtG~~~~~~~~~gv~PDivt~g--K~-l~gG 295 (466)
T PRK07036 220 NIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGF-GRLGHFFASEAVFGIQPDIITFA--KG-LTSG 295 (466)
T ss_pred ceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCC-CcCchhhhhhhhcCCCCCEEEEc--cc-cccC
Confidence 3444444 44555 88888 556654 689999999999995 4 5421 111 13569998884 76 443
Q ss_pred --CCceEEEEEeCCCcc
Q 035915 320 --PSKITCLLIRKKSFD 334 (344)
Q Consensus 320 --P~GiG~L~Vr~~~~~ 334 (344)
| +|++++++++.+
T Consensus 296 ~~P--i~av~~~~~i~~ 310 (466)
T PRK07036 296 YQP--LGAVIISERLLD 310 (466)
T ss_pred ccc--cEEEEEcHHHHH
Confidence 5 899999987654
No 349
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=93.23 E-value=2.8 Score=42.93 Aligned_cols=88 Identities=15% Similarity=0.173 Sum_probs=56.3
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEE-eCccc-cccccHH----HHH-HHHhCCcEEEecccccCcCCccCC------CCCCC
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYSMH----WIS-EAHRNSWHVLLDATALVVGEDRLN------LALHR 304 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~Pl~----~Ia-~ar~~g~~vlvDAaQa~~G~~~LD------Ls~l~ 304 (344)
+.+++++.+... . .+...|.+ +.+++ |.+.|.. .+. .|+++|+++++|=+|. |- +.. .-...
T Consensus 187 d~~~l~~~l~~~-~-~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t--G~-R~G~~ga~~~~gv~ 261 (433)
T PRK00615 187 DFQIFQTVMNSL-G-HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT--GF-RVAQGGAAAIYHVK 261 (433)
T ss_pred CHHHHHHHHHhc-C-CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc--cc-cccHhHHHHhcCCC
Confidence 456788777532 1 23445554 44555 8888853 454 3688999999999994 43 111 12347
Q ss_pred CcEEEEccccCCCCC--CCceEEEEEeCCCccc
Q 035915 305 PDFVLCNLDNTQNAQ--PSKITCLLIRKKSFDT 335 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~--P~GiG~L~Vr~~~~~~ 335 (344)
||++++ =|. +|+ | +|++..+++..+.
T Consensus 262 PDi~~~--gK~-lggG~p--~~av~~~~~i~~~ 289 (433)
T PRK00615 262 PDITVY--GKI-LGGGLP--AAAVVAHKSIMDH 289 (433)
T ss_pred CCeEEE--ccc-ccCCcc--eeeeeecHHHHhh
Confidence 999875 687 652 5 7888888876543
No 350
>PRK07482 hypothetical protein; Provisional
Probab=93.16 E-value=1.4 Score=45.48 Aligned_cols=91 Identities=12% Similarity=0.137 Sum_probs=53.6
Q ss_pred HHHHHHHhhhcCCCCCeeEEEE-eCccc-cccccH-HHHH----HHHhCCcEEEecccccCcCCcc----CCCCCCCCcE
Q 035915 239 GSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYSM-HWIS----EAHRNSWHVLLDATALVVGEDR----LNLALHRPDF 307 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~Pl-~~Ia----~ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DF 307 (344)
.+.|++.+... ......-|.+ |.+.+ |.+.|- +.+. .|+++|+++++|=+|.-.|..- .+.-...||+
T Consensus 206 ~~~l~~~~~~~-~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDi 284 (461)
T PRK07482 206 ADELEELILAE-GPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDL 284 (461)
T ss_pred HHHHHHHHHhc-CCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCCCCCE
Confidence 35566666421 1123333333 44444 877554 4443 3588999999999998214321 1122457999
Q ss_pred EEEccccCCCCC--CCceEEEEEeCCCcc
Q 035915 308 VLCNLDNTQNAQ--PSKITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~l~G~--P~GiG~L~Vr~~~~~ 334 (344)
+++ =|.|-|| | +|+++++++..+
T Consensus 285 v~~--gKgl~gG~~P--i~av~~~~~i~~ 309 (461)
T PRK07482 285 ITV--AKGLTSAYAP--LSGSIVGEKVWD 309 (461)
T ss_pred EEE--ccccccCccc--cceeeecHHHHH
Confidence 998 4773332 5 788888877643
No 351
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=92.89 E-value=1.3 Score=45.65 Aligned_cols=159 Identities=14% Similarity=0.086 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHH---HhhCCCCCCCeEEEcCC-cC--HHHHHHHHH----------c
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLV---GESYPFFRGNFYMTIIG-EE--LDYVREFAS----------F 220 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlv---a~sl~~~~Gd~ivS~~e-H~--~~~ir~la~----------~ 220 (344)
.++-| +.|.+.+..- + .|=|++++|||.+.+ +++|. ..+.|+---+ +| .+.+..-+. .
T Consensus 95 Ei~~A-ell~~~~p~~-e--~vrfvnSGTEAtmsAiRlARa~T--gR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s 168 (432)
T COG0001 95 EVELA-ELLIERVPSI-E--KVRFVNSGTEATMSAIRLARAYT--GRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSS 168 (432)
T ss_pred HHHHH-HHHHHhcCcc-c--EEEEecchhHHHHHHHHHHHHhh--CCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCC
Confidence 34444 6666666642 2 699999999998764 44552 3344442111 22 333321110 0
Q ss_pred CCc------EEEEEeCCCCCCccCHHHHHHHhhhcCCCCCe-eEEEEeCccc-cccccHH----HHHH-HHhCCcEEEec
Q 035915 221 KES------KVILAPEAWLDLRIKGSQLSQYFRRKCKHTPK-GLFSYPADIN-GTRYSMH----WISE-AHRNSWHVLLD 287 (344)
Q Consensus 221 ~G~------kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t-~LVa~~avSN-G~i~Pl~----~Ia~-ar~~g~~vlvD 287 (344)
.|+ .+..+|.+ |.+.+++++... . .+. .++.=|.+.| |.+.|-+ .+.+ ++++|++++.|
T Consensus 169 ~Gvp~~~a~~ti~~~yN------D~~al~~~~~~~-g-~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~D 240 (432)
T COG0001 169 PGVPADVAKHTLVLPYN------DLEALEEAFEEY-G-DDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFD 240 (432)
T ss_pred CCCChhhhccEEEecCC------CHHHHHHHHHHc-C-CcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEe
Confidence 011 23334443 467788888752 1 123 3444456668 9999973 3333 48899999999
Q ss_pred ccccCcCCccCCCC------CCCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 288 ATALVVGEDRLNLA------LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 288 AaQa~~G~~~LDLs------~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
=+..- .++.+. .+.||+.++ =|+ .|+=--+|++-.|++..+.
T Consensus 241 EViTG---FR~~~gGaq~~~gi~PDlttl--GKi-IGGGlP~ga~gGr~eiM~~ 288 (432)
T COG0001 241 EVITG---FRVALGGAQGYYGVEPDLTTL--GKI-IGGGLPIGAFGGRAEIMEQ 288 (432)
T ss_pred cchhh---cccCCcccccccCcCcchhhh--hhh-hcCCcceeeeccHHHHHhh
Confidence 88774 344432 256898776 488 6653348888888877664
No 352
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=92.74 E-value=2.2 Score=44.09 Aligned_cols=88 Identities=20% Similarity=0.348 Sum_probs=53.3
Q ss_pred HHHHHHhhhcCCCCCeeEEEE-e-Cccc-cccccH-HHH---HH-HHhCCcEEEeccccc-CcCCccC----CCCCCCCc
Q 035915 240 SQLSQYFRRKCKHTPKGLFSY-P-ADIN-GTRYSM-HWI---SE-AHRNSWHVLLDATAL-VVGEDRL----NLALHRPD 306 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~-~-avSN-G~i~Pl-~~I---a~-ar~~g~~vlvDAaQa-~~G~~~L----DLs~l~~D 306 (344)
+.+++.+... ..+..-|.+ + .+.+ |.+.|- +.+ .+ |+++|+++++|=+|. + |..-- +.-...||
T Consensus 202 ~~le~~~~~~--~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGf-GRtG~~~a~~~~gv~PD 278 (466)
T PRK07030 202 AHMEQTLAEH--HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGF-GRTGTMFACEQAGIRPD 278 (466)
T ss_pred HHHHHHHHhC--CCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCc-CccccchHHHhcCCCCC
Confidence 4456666521 123444444 4 3444 877664 333 33 588999999999987 4 53211 22245799
Q ss_pred EEEEccccCCCCC--CCceEEEEEeCCCcc
Q 035915 307 FVLCNLDNTQNAQ--PSKITCLLIRKKSFD 334 (344)
Q Consensus 307 Fvv~S~HK~l~G~--P~GiG~L~Vr~~~~~ 334 (344)
+++++ |.|-|| | +|++++++++.+
T Consensus 279 iv~~g--Kgl~gG~~P--i~av~~~~ei~~ 304 (466)
T PRK07030 279 FLCLS--KALTGGYLP--LAAVLTTDTVYQ 304 (466)
T ss_pred EEeee--hhccCCccc--ceEEEecHHHHH
Confidence 99994 652333 5 899999987654
No 353
>PRK07483 hypothetical protein; Provisional
Probab=92.60 E-value=2.7 Score=43.05 Aligned_cols=90 Identities=18% Similarity=0.197 Sum_probs=53.1
Q ss_pred HHHHHHhhhcCCCCCee-EEEEeCcc-c-ccccc----HHHHHH-HHhCCcEEEeccccc-CcCCcc----CCCCCCCCc
Q 035915 240 SQLSQYFRRKCKHTPKG-LFSYPADI-N-GTRYS----MHWISE-AHRNSWHVLLDATAL-VVGEDR----LNLALHRPD 306 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~-LVa~~avS-N-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa-~~G~~~----LDLs~l~~D 306 (344)
++|++.+... ...+.. ++.=+.+. + |.+.| ++.+.+ |+++|+++++|=+|. + |..- .+.-...||
T Consensus 186 ~~l~~~~~~~-~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf-GRtG~~~a~~~~gv~PD 263 (443)
T PRK07483 186 DELEAKILEL-GPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGM-GRTGTLFACEEDGVAPD 263 (443)
T ss_pred HHHHHHHHhc-CCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCc-ccCcHHHHHhhcCCCCC
Confidence 4555555421 112343 34445553 4 77766 344433 589999999999998 4 4321 111235799
Q ss_pred EEEEccccCCCCC--CCceEEEEEeCCCccc
Q 035915 307 FVLCNLDNTQNAQ--PSKITCLLIRKKSFDT 335 (344)
Q Consensus 307 Fvv~S~HK~l~G~--P~GiG~L~Vr~~~~~~ 335 (344)
.++++ |.|-|| | +|++++++++.+.
T Consensus 264 iv~~g--K~l~gG~~P--i~av~~~~~i~~~ 290 (443)
T PRK07483 264 LVTIA--KGLGAGYQP--IGAVLASDRIYDA 290 (443)
T ss_pred eeeeh--hhhccCccc--cEEEEEcHHHHHH
Confidence 99984 652332 5 8999999876543
No 354
>PRK05965 hypothetical protein; Provisional
Probab=92.31 E-value=3.1 Score=42.82 Aligned_cols=91 Identities=12% Similarity=0.186 Sum_probs=54.3
Q ss_pred HHHHHHhhhcCCCCCee-EEEEeCccc-cccccH-HHHH----HHHhCCcEEEecccccCcCCcc----CCCCCCCCcEE
Q 035915 240 SQLSQYFRRKCKHTPKG-LFSYPADIN-GTRYSM-HWIS----EAHRNSWHVLLDATALVVGEDR----LNLALHRPDFV 308 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~-LVa~~avSN-G~i~Pl-~~Ia----~ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DFv 308 (344)
+.+++.+... ...+.. ++.=|.+.+ |.+.|- +.+. .|+++|+++++|=+|.-.|..- .+.-...||++
T Consensus 202 ~~l~~~i~~~-~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv 280 (459)
T PRK05965 202 AALRAKVAEL-GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEAEGVVPDLM 280 (459)
T ss_pred HHHHHHHHhc-CCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCCCCCeE
Confidence 4566666531 112333 344454444 777654 5554 2578999999999998214331 11123569999
Q ss_pred EEccccCCCCC--CCceEEEEEeCCCccc
Q 035915 309 LCNLDNTQNAQ--PSKITCLLIRKKSFDT 335 (344)
Q Consensus 309 v~S~HK~l~G~--P~GiG~L~Vr~~~~~~ 335 (344)
+++ |.|-|| | +|++++++++.+.
T Consensus 281 ~~g--Kgl~gG~~P--i~av~~~~~i~~~ 305 (459)
T PRK05965 281 TVA--KGLTSGYVP--MGAVLMSDHVYQG 305 (459)
T ss_pred Eec--hhhccCCcc--eeEEEEcHHHHHH
Confidence 985 652332 5 8999999887543
No 355
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=91.98 E-value=4.9 Score=41.44 Aligned_cols=173 Identities=14% Similarity=0.109 Sum_probs=87.3
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh-CCCCCCCeEEEcC-CcC--HHHHHHHH-----HcCCc----
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES-YPFFRGNFYMTII-GEE--LDYVREFA-----SFKES---- 223 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s-l~~~~Gd~ivS~~-eH~--~~~ir~la-----~~~G~---- 223 (344)
...+.-+++++.+....+ .|.|+.++|||+...+.- ..+.....|++.. .+| ......+. .+.+.
T Consensus 97 ~~~~lae~L~~~~p~~~~--~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~ 174 (457)
T PRK05639 97 RAIRVAEKLAEISPIENP--KVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLM 174 (457)
T ss_pred HHHHHHHHHHhhCCCCcC--EEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCC
Confidence 334455566666653222 799999999987754431 1122233455432 344 22111111 11111
Q ss_pred -EEEEEeCCCCCC-c------cCH--------HHHHHHhhhc-CCCCCeeEEEE-eCccc-cccccH-HHHH----HHHh
Q 035915 224 -KVILAPEAWLDL-R------IKG--------SQLSQYFRRK-CKHTPKGLFSY-PADIN-GTRYSM-HWIS----EAHR 279 (344)
Q Consensus 224 -kV~~vp~~~~~g-~------i~~--------~~L~~~l~~~-~~~~~t~LVa~-~avSN-G~i~Pl-~~Ia----~ar~ 279 (344)
.+.++|...... . -+. +.|++.+... ....+..-|.+ +.+.+ |.+.|- +.+. .|++
T Consensus 175 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~ 254 (457)
T PRK05639 175 PNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDE 254 (457)
T ss_pred CCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 244555432100 0 011 2244433210 01123444444 44444 877663 4443 3578
Q ss_pred CCcEEEecccccCcCCcc----CCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 280 NSWHVLLDATALVVGEDR----LNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 280 ~g~~vlvDAaQa~~G~~~----LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
+|+++++|=+|.-.|..- .+.-...||++++ =|. +|+=.++|+++.+++..+
T Consensus 255 ~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~~--gK~-l~gG~pi~av~~~~~i~~ 310 (457)
T PRK05639 255 HGILLVMDEVQTGIGRTGKWFASEWFEVKPDLIIF--GKG-VASGMGLSGVIGRKELMD 310 (457)
T ss_pred cCCEEEEechhhccCcCchHHHHHhcCCCCCEEEe--chh-hcCCCcceeEEehHHHHh
Confidence 999999999997214221 1112357999995 687 542234899999888765
No 356
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=91.63 E-value=7.1 Score=39.75 Aligned_cols=59 Identities=14% Similarity=0.072 Sum_probs=38.0
Q ss_pred CeeEEEEe-Cccc-cccccH----HHHH-HHHhCCcEEEeccccc-CcCCc----cCCCCCCCCcEEEEccc
Q 035915 254 PKGLFSYP-ADIN-GTRYSM----HWIS-EAHRNSWHVLLDATAL-VVGED----RLNLALHRPDFVLCNLD 313 (344)
Q Consensus 254 ~t~LVa~~-avSN-G~i~Pl----~~Ia-~ar~~g~~vlvDAaQa-~~G~~----~LDLs~l~~DFvv~S~H 313 (344)
.+..|.+. .+.+ |.+.|- +.|. .|+++|+++++|-+|. + |.. ..+.....||+++++-.
T Consensus 218 ~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~-GrtG~~~a~~~~gv~PDi~~~gK~ 288 (431)
T TIGR03251 218 DIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGV-GLTGTAWAYQQLGVQPDIVAFGKK 288 (431)
T ss_pred cEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcc-CccchHHHHHhcCCCCCEEEeccc
Confidence 35555554 4445 877532 3443 3589999999999999 5 765 12223457999987544
No 357
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=91.63 E-value=7.7 Score=40.33 Aligned_cols=210 Identities=10% Similarity=0.016 Sum_probs=105.4
Q ss_pred cCCCCCCcccccchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCC-
Q 035915 122 FGSNLPDLDRTQLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRG- 200 (344)
Q Consensus 122 ~Ga~lp~~s~v~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~G- 200 (344)
.|=+-|. .+++..+.+....+-++.+.-. +...+.=+++.+++-.+ ....+.|+.++|||+..++.--..-.|
T Consensus 70 ~GH~hP~--Vv~Av~~q~~~~~h~~~~~~~~---e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~E~AiKiAr~~Tgr 143 (447)
T COG0160 70 LGHNHPR--VVEAVKRQLAKLNHTHTRDLYY---EPYVELAEKLTALAPGS-GLKKVFFGNSGAEAVEAAIKIARAYTGR 143 (447)
T ss_pred cCCCCHH--HHHHHHHHHHHhhcccCCcccc---hhHHHHHHHHHHhCCcc-cCCeEEecCCcHHHHHHHHHHHHHHhCC
Confidence 5655465 4555444455443233322211 23333334445554442 223699999999998875542111123
Q ss_pred CeEEE-cCCcC--HHHHHHH----H-HcCC-----cEEEEEeCCCCC-C----------ccCHHHHHHHhhh-cCCCCC-
Q 035915 201 NFYMT-IIGEE--LDYVREF----A-SFKE-----SKVILAPEAWLD-L----------RIKGSQLSQYFRR-KCKHTP- 254 (344)
Q Consensus 201 d~ivS-~~eH~--~~~ir~l----a-~~~G-----~kV~~vp~~~~~-g----------~i~~~~L~~~l~~-~~~~~~- 254 (344)
..+++ .-.+| ....-.+ . .++| ..|..+|....- . .-..+.+++++.. .....+
T Consensus 144 ~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~v 223 (447)
T COG0160 144 PGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEV 223 (447)
T ss_pred CcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCce
Confidence 33443 22334 1111111 0 1111 235556643210 0 1122334553322 111112
Q ss_pred eeEEEEeCccc-cccccH-HHHHH----HHhCCcEEEecccccCcCCcc--CCCC--CCCCcEEEEccccCCCCCCCceE
Q 035915 255 KGLFSYPADIN-GTRYSM-HWISE----AHRNSWHVLLDATALVVGEDR--LNLA--LHRPDFVLCNLDNTQNAQPSKIT 324 (344)
Q Consensus 255 t~LVa~~avSN-G~i~Pl-~~Ia~----ar~~g~~vlvDAaQa~~G~~~--LDLs--~l~~DFvv~S~HK~l~G~P~GiG 324 (344)
..+|+=+.++. |.+.|- .++.. |+++|+++++|=+|+=+|..- +-++ ...||.+|++ |- +|+=--+|
T Consensus 224 AaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt~a--K~-ig~G~Pl~ 300 (447)
T COG0160 224 AAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVTLA--KS-LGGGLPLS 300 (447)
T ss_pred eEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEEec--cc-ccCCCcee
Confidence 34555566664 877665 66653 478999999999998434321 2222 3469999986 66 55422288
Q ss_pred EEEEeCCCccccccccc
Q 035915 325 CLLIRKKSFDTSTSSAH 341 (344)
Q Consensus 325 ~L~Vr~~~~~~~~~~~~ 341 (344)
+++.|++..+ .....|
T Consensus 301 avv~r~ei~~-~~~g~~ 316 (447)
T COG0160 301 AVVGRAEIMD-WPPGGH 316 (447)
T ss_pred EEeccHHhcc-cCCccc
Confidence 9999988776 344444
No 358
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=91.44 E-value=1.9 Score=43.53 Aligned_cols=92 Identities=10% Similarity=0.109 Sum_probs=53.4
Q ss_pred HHHHHHhhhcCCCCCeeEEEEe-Cccc-ccccc----HHHHH-HHHhCCcEEEecccccCcCCcc----CCCCCCCCcEE
Q 035915 240 SQLSQYFRRKCKHTPKGLFSYP-ADIN-GTRYS----MHWIS-EAHRNSWHVLLDATALVVGEDR----LNLALHRPDFV 308 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~~-avSN-G~i~P----l~~Ia-~ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DFv 308 (344)
+.|++.+...........|.+. .+++ |.+.| ++.|. .|+++|++++.|=++.-.|... ++.....+|+
T Consensus 185 ~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~~~~~~~~~pdi- 263 (425)
T PRK08088 185 ASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADL- 263 (425)
T ss_pred HHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhHHhhcCCCCCE-
Confidence 4577777521111234444444 4445 77766 44443 3688999999999987213321 2223356785
Q ss_pred EEccccCCCCCC-CceEEEEEeCCCccc
Q 035915 309 LCNLDNTQNAQP-SKITCLLIRKKSFDT 335 (344)
Q Consensus 309 v~S~HK~l~G~P-~GiG~L~Vr~~~~~~ 335 (344)
.|+=|. ++ | -.+|+++.++++.+.
T Consensus 264 -~s~sK~-l~-~G~rig~v~~~~~~~~~ 288 (425)
T PRK08088 264 -TTFAKS-IA-GGFPLAGVTGRAEVMDA 288 (425)
T ss_pred -EEEecc-cc-CCCcceeeEecHHHHhh
Confidence 455798 66 4 137999987665443
No 359
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=91.44 E-value=11 Score=39.31 Aligned_cols=72 Identities=15% Similarity=0.308 Sum_probs=43.2
Q ss_pred HHHHHHHhhhcCCCCCee-EEEEeCccc-ccccc----HHHHHH-HHhCCcEEEecccccCcCCcc-------CCCCCCC
Q 035915 239 GSQLSQYFRRKCKHTPKG-LFSYPADIN-GTRYS----MHWISE-AHRNSWHVLLDATALVVGEDR-------LNLALHR 304 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~-LVa~~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa~~G~~~-------LDLs~l~ 304 (344)
.+.|++++... . .... ++.=+.+.+ |.+.| ++.+.+ |+++|+++++|=+|.-.|..- .++. ..
T Consensus 238 l~~l~~~l~~~-~-~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~-~~ 314 (464)
T TIGR00699 238 LEEVEDLIKKW-H-KPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLD-DP 314 (464)
T ss_pred HHHHHHHHHhc-C-CcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCC-CC
Confidence 34566677531 1 1233 333355555 88888 666654 689999999999996214311 1222 24
Q ss_pred CcEEEEccccC
Q 035915 305 PDFVLCNLDNT 315 (344)
Q Consensus 305 ~DFvv~S~HK~ 315 (344)
||++++ =|.
T Consensus 315 PDi~t~--gK~ 323 (464)
T TIGR00699 315 PDMVTF--SKK 323 (464)
T ss_pred CCEEEe--hhh
Confidence 999887 476
No 360
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=91.37 E-value=10 Score=38.29 Aligned_cols=93 Identities=9% Similarity=0.041 Sum_probs=53.9
Q ss_pred HHHHHHhhhcCCCCCeeEEEEe-Cccc-ccccc----HHHHHH-HHhCCcEEEecccccCcCCcc----CCCCCCCCcEE
Q 035915 240 SQLSQYFRRKCKHTPKGLFSYP-ADIN-GTRYS----MHWISE-AHRNSWHVLLDATALVVGEDR----LNLALHRPDFV 308 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~~-avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DFv 308 (344)
+.+++.+...........|.+- .+.+ |.+.| ++.|.+ |+++|+++++|=+|.-.|..- ++-....||.+
T Consensus 183 ~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~ 262 (420)
T TIGR00700 183 AAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLI 262 (420)
T ss_pred HHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEE
Confidence 3455555311111244555543 3444 88887 455544 689999999999987324321 11123468977
Q ss_pred EEccccCCCCCCCceEEEEEeCCCccc
Q 035915 309 LCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 309 v~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+ +=|. +++=--+|++++++++.+.
T Consensus 263 ~--lsK~-l~~G~pig~v~~~~~i~~~ 286 (420)
T TIGR00700 263 T--TAKS-LADGLPLSGVTGRAEIMDA 286 (420)
T ss_pred E--eecc-ccCCcceEEEEecHHHHhh
Confidence 6 5687 5521238999998876554
No 361
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=91.13 E-value=2.2 Score=42.40 Aligned_cols=165 Identities=16% Similarity=0.126 Sum_probs=93.8
Q ss_pred cccchHHHHHHhhccCCC--Ch-hhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEc-
Q 035915 131 RTQLEPSRLLDILTKKSS--FP-GSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTI- 206 (344)
Q Consensus 131 ~v~~~~~~L~~~L~gnss--~~-g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~- 206 (344)
.+.+.++.|.+.=.|-++ +- |.+. .-.+...+||+|=+-. | .+.-+++-+|+..+.+.+ +.+.+.+.|+
T Consensus 86 ii~a~~~aleeyGaGlssvrfIcGtq~--iHk~LE~kiAqfh~rE-D---~ilypscfdANag~feai-l~pedAvfSDe 158 (417)
T KOG1359|consen 86 IINAGQKALEEYGAGLSSVRFICGTQD--IHKLLESKIAQFHGRE-D---TILYPSCFDANAGAFEAI-LTPEDAVFSDE 158 (417)
T ss_pred HHHHHHHHHHHhCCCccceeEEecchH--HHHHHHHHHHHHhCCC-c---eEEeccccccchHHHHHh-cChhhhhhccc
Confidence 566667777765444432 21 2221 2244556788887653 2 344444445555555554 3455555554
Q ss_pred CCcC--HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc--ccccccHHHHHH-HHhCC
Q 035915 207 IGEE--LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI--NGTRYSMHWISE-AHRNS 281 (344)
Q Consensus 207 ~eH~--~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS--NG~i~Pl~~Ia~-ar~~g 281 (344)
+.|. .+.+| +|++.+ .++.-+|+..+...+|. +.+||+-..+= .|-+-|+++|.. ++++|
T Consensus 159 LNhASIIdGir-Lckry~-------------h~dv~~l~~~l~~a~k~-r~klv~TDg~FSMDGdiaPl~ei~~La~kYg 223 (417)
T KOG1359|consen 159 LNHASIIDGIR-LCKRYR-------------HVDVFDLEHCLISACKM-RLKLVVTDGVFSMDGDIAPLEEISQLAKKYG 223 (417)
T ss_pred cccchhhhhhH-HHhhhc-------------cchhHHHHHHHHHhhhh-eEEEEEecceeccCCCcccHHHHHHHHHhcC
Confidence 3333 33443 454322 22333444333333332 45677766553 399999988865 58899
Q ss_pred cEEEecccccCcCCcc---------CCCCCCCCcEEEEccccCCCCCC
Q 035915 282 WHVLLDATALVVGEDR---------LNLALHRPDFVLCNLDNTQNAQP 320 (344)
Q Consensus 282 ~~vlvDAaQa~~G~~~---------LDLs~l~~DFvv~S~HK~l~G~P 320 (344)
+++++|-+|+- |-.- +++. -++|.+...+-|. +|+-
T Consensus 224 aLlfiDecHaT-gf~G~tGrGt~E~~~vm-~~vdiinsTLgKA-lGga 268 (417)
T KOG1359|consen 224 ALLFIDECHAT-GFFGETGRGTAEEFGVM-GDVDIINSTLGKA-LGGA 268 (417)
T ss_pred cEEEEeecccc-eeecCCCCChHHHhCCC-Ccceehhhhhhhh-hcCC
Confidence 99999999986 4322 2221 3699999999998 6643
No 362
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=90.96 E-value=0.43 Score=42.27 Aligned_cols=43 Identities=12% Similarity=0.224 Sum_probs=32.3
Q ss_pred HHHHHHHHHHc----C----CCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEE
Q 035915 159 IQARNKVLKHC----G----LPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYM 204 (344)
Q Consensus 159 e~AR~~IA~~L----g----a~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~iv 204 (344)
.+.|+.||+++ | ++++ +|++|+|+|+|+.+++.++ ..+||.|+
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd--~Ivvt~Ga~~al~~l~~~l-~dpGD~Vl 145 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDAD--MIVLSAGATAANEIIMFCI-ADPGDAFL 145 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchh--heEEcCCHHHHHHHHHHHH-cCCCCEEE
Confidence 34556666555 4 3455 7999999999999999988 46899865
No 363
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=90.93 E-value=3.9 Score=41.81 Aligned_cols=90 Identities=11% Similarity=0.135 Sum_probs=51.2
Q ss_pred HHHHHHHhhhcCCCCCeeEEEEeC-cc-c-ccccc----HHHHHH-HHhCCcEEEecccccCcCCc----cCCCCCCCCc
Q 035915 239 GSQLSQYFRRKCKHTPKGLFSYPA-DI-N-GTRYS----MHWISE-AHRNSWHVLLDATALVVGED----RLNLALHRPD 306 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~LVa~~a-vS-N-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa~~G~~----~LDLs~l~~D 306 (344)
.+++++.+... ..+...|.+-- .+ + |.+.| ++.+.+ |+++|+++++|=+|.-.|.. -.+.....||
T Consensus 191 ~~~l~~~l~~~--~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv~PD 268 (428)
T PRK07986 191 IAPFARLMAAH--RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFACEHAGIAPD 268 (428)
T ss_pred HHHHHHHHHhC--CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeeeecccCCCCC
Confidence 35666667531 12355555533 23 4 66543 344433 58899999999999411321 1122345799
Q ss_pred EEEEccccCCCCC--CCceEEEEEeCCCcc
Q 035915 307 FVLCNLDNTQNAQ--PSKITCLLIRKKSFD 334 (344)
Q Consensus 307 Fvv~S~HK~l~G~--P~GiG~L~Vr~~~~~ 334 (344)
++++ =|.|-|| | +|++++++++.+
T Consensus 269 i~t~--gK~l~gG~~p--~~av~~~~~i~~ 294 (428)
T PRK07986 269 ILCL--GKALTGGTMT--LSATLTTREVAE 294 (428)
T ss_pred EEEe--chhhhCCccc--CcchhchHHHHH
Confidence 9975 5763333 4 577777776554
No 364
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=90.51 E-value=3.8 Score=40.88 Aligned_cols=79 Identities=11% Similarity=0.151 Sum_probs=56.4
Q ss_pred CeeEEEEeCccc--cccccHHHHH----HHHhCCcEEEecccccCcCCccCCCCC----CCCc-EEEEccccCCCCCCC-
Q 035915 254 PKGLFSYPADIN--GTRYSMHWIS----EAHRNSWHVLLDATALVVGEDRLNLAL----HRPD-FVLCNLDNTQNAQPS- 321 (344)
Q Consensus 254 ~t~LVa~~avSN--G~i~Pl~~Ia----~ar~~g~~vlvDAaQa~~G~~~LDLs~----l~~D-Fvv~S~HK~l~G~P~- 321 (344)
+++.++++--.| |.++-=+++. .++++|+.+++|-|=.+ +--.+.+++ |+.. .+|+|+-| .|-|.
T Consensus 179 ~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~-PFP~iifsd~~~~w~~NiilC~SLSK--~GLPG~ 255 (417)
T COG3977 179 STGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV-PFPGIIFSDATPLWNENIILCMSLSK--LGLPGS 255 (417)
T ss_pred ccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC-CCCceecccccccCCCCEEEEeehhh--cCCCCc
Confidence 588999986665 8776655553 24889999999999888 555555554 3333 67899999 47784
Q ss_pred ceEEEEEeCCCccc
Q 035915 322 KITCLLIRKKSFDT 335 (344)
Q Consensus 322 GiG~L~Vr~~~~~~ 335 (344)
.+|+.+.++++...
T Consensus 256 R~GIiIane~viqa 269 (417)
T COG3977 256 RCGIIIANEKVIQA 269 (417)
T ss_pred ceeEEEccHHHHHH
Confidence 47888877766543
No 365
>PRK06917 hypothetical protein; Provisional
Probab=89.87 E-value=11 Score=38.70 Aligned_cols=89 Identities=10% Similarity=0.097 Sum_probs=51.5
Q ss_pred HHHHHHhhhcCCCCCee-EEEEeCccc--ccccc-HHHHH----HHHhCCcEEEecccccCcCCccC----CCCCCCCcE
Q 035915 240 SQLSQYFRRKCKHTPKG-LFSYPADIN--GTRYS-MHWIS----EAHRNSWHVLLDATALVVGEDRL----NLALHRPDF 307 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~-LVa~~avSN--G~i~P-l~~Ia----~ar~~g~~vlvDAaQa~~G~~~L----DLs~l~~DF 307 (344)
+.+++.+.... ..... ++.=|.+.+ |.+.| -+.+. .|+++|+++++|=+|.-.|..-- +.-...||+
T Consensus 186 ~~le~~i~~~~-~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi 264 (447)
T PRK06917 186 TELETAIERIG-AEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDI 264 (447)
T ss_pred HHHHHHHHhcC-CCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCE
Confidence 45566665311 11343 333454543 56665 35443 35789999999999872132211 112356999
Q ss_pred EEEccccCCCCC---CCceEEEEEeCCCcc
Q 035915 308 VLCNLDNTQNAQ---PSKITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~l~G~---P~GiG~L~Vr~~~~~ 334 (344)
+++ =|. +|+ | +|++.++++..+
T Consensus 265 ~~~--gK~-l~~G~~P--i~a~~~~~~i~~ 289 (447)
T PRK06917 265 MTL--GKG-LGAGYTP--IAATVVSDRVME 289 (447)
T ss_pred EEe--eeh-hccCCcc--eEEEEEcHHHHH
Confidence 877 477 442 5 788988876654
No 366
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=89.52 E-value=6.3 Score=40.59 Aligned_cols=90 Identities=18% Similarity=0.296 Sum_probs=54.2
Q ss_pred HHHHHHhhhcCCCCCeeEEEE-eC-ccc-cccccH-HHHH---H-HHhCCcEEEecccccCcCCccC----CCCCCCCcE
Q 035915 240 SQLSQYFRRKCKHTPKGLFSY-PA-DIN-GTRYSM-HWIS---E-AHRNSWHVLLDATALVVGEDRL----NLALHRPDF 307 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~-~a-vSN-G~i~Pl-~~Ia---~-ar~~g~~vlvDAaQa~~G~~~L----DLs~l~~DF 307 (344)
+.+++.+... ..+..-|.+ |. +.+ |.+.|- +.+. + |+++|+++++|=+|.-.|..-- +.-...||+
T Consensus 209 ~~l~~~l~~~--~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv~PDi 286 (453)
T PRK06943 209 ADVRRLFAER--AGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGVWPDF 286 (453)
T ss_pred HHHHHHHHhC--CCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCCCCCe
Confidence 4566666531 123444444 42 444 776553 4443 3 5789999999999972153321 122357999
Q ss_pred EEEccccCCCCC--CCceEEEEEeCCCccc
Q 035915 308 VLCNLDNTQNAQ--PSKITCLLIRKKSFDT 335 (344)
Q Consensus 308 vv~S~HK~l~G~--P~GiG~L~Vr~~~~~~ 335 (344)
++++ |.|-|| | +|++++++++.+.
T Consensus 287 vt~g--Kgl~gG~~P--i~av~~~~ei~~~ 312 (453)
T PRK06943 287 LCLS--KGISGGYLP--LSLVLSRDAIFAA 312 (453)
T ss_pred Eeee--hhhccCccc--ceEEEEcHHHHHh
Confidence 9994 652333 5 8999999876543
No 367
>PRK06149 hypothetical protein; Provisional
Probab=89.20 E-value=22 Score=40.22 Aligned_cols=76 Identities=12% Similarity=0.121 Sum_probs=49.7
Q ss_pred eeEEEE-eCccc-ccccc----HHHHHH-HHhCCcEEEeccccc-CcCCcc--C-CC--CCCCCcEEEEccccCCCCCCC
Q 035915 255 KGLFSY-PADIN-GTRYS----MHWISE-AHRNSWHVLLDATAL-VVGEDR--L-NL--ALHRPDFVLCNLDNTQNAQPS 321 (344)
Q Consensus 255 t~LVa~-~avSN-G~i~P----l~~Ia~-ar~~g~~vlvDAaQa-~~G~~~--L-DL--s~l~~DFvv~S~HK~l~G~P~ 321 (344)
...|.+ +.+++ |.+.| ++.+.+ |+++|+++++|=+|. + |..- + -. ....||.+++ =|. +|+=-
T Consensus 745 iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGf-GRtG~~~~a~e~~gv~PDivt~--gK~-lg~G~ 820 (972)
T PRK06149 745 LAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGY-GRLGHYFWGFEQQGVVPDIITM--AKG-MGNGH 820 (972)
T ss_pred eEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcC-CccCccchhhhhcCCCCCEEEe--ccc-ccCCe
Confidence 444444 45555 88888 766654 689999999999993 4 4432 1 11 2356999976 577 44312
Q ss_pred ceEEEEEeCCCcc
Q 035915 322 KITCLLIRKKSFD 334 (344)
Q Consensus 322 GiG~L~Vr~~~~~ 334 (344)
-+|++++++++.+
T Consensus 821 Pl~av~~~~~i~~ 833 (972)
T PRK06149 821 PLGAVITRREIAE 833 (972)
T ss_pred eeEEEEEcHHHHh
Confidence 2899999987654
No 368
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=89.08 E-value=4.7 Score=41.05 Aligned_cols=74 Identities=16% Similarity=0.146 Sum_probs=44.9
Q ss_pred EEEEeC-ccc-cccccH-HHHH----HHHhCCcEEEecccccCcCCcc----CCCCCCCCcEEEEccccCCC-CC-CCce
Q 035915 257 LFSYPA-DIN-GTRYSM-HWIS----EAHRNSWHVLLDATALVVGEDR----LNLALHRPDFVLCNLDNTQN-AQ-PSKI 323 (344)
Q Consensus 257 LVa~~a-vSN-G~i~Pl-~~Ia----~ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DFvv~S~HK~l~-G~-P~Gi 323 (344)
++.=|. +.+ |.+.|- +.+. .|+++|+++++|=+|.-.|..- .......||++++ =|. + || + -+
T Consensus 204 vi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDi~t~--gK~-l~gG~~-p~ 279 (422)
T PRK05630 204 IIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELFATLAAGVTPDIMCV--GKA-LTGGFM-SF 279 (422)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCCCCCeeee--ech-hhcCcc-cc
Confidence 344443 444 776553 4443 3578999999999995213211 1222457999966 588 5 32 3 26
Q ss_pred EEEEEeCCCcc
Q 035915 324 TCLLIRKKSFD 334 (344)
Q Consensus 324 G~L~Vr~~~~~ 334 (344)
|++++++++.+
T Consensus 280 ~av~~~~~i~~ 290 (422)
T PRK05630 280 AATLCTDKVAQ 290 (422)
T ss_pred ceeeccHHHHH
Confidence 88888877654
No 369
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=88.78 E-value=3.4 Score=42.07 Aligned_cols=193 Identities=12% Similarity=0.057 Sum_probs=112.9
Q ss_pred cCCCCCCcccccchHHHHHHhhccCCCChhhhhhHHHHHHHHHHHH-HcCCCC---CCCeEE--EeCCHHHHHHHHHhhC
Q 035915 122 FGSNLPDLDRTQLEPSRLLDILTKKSSFPGSFISIPEIQARNKVLK-HCGLPD---DEYLVL--FTPNYRDAMMLVGESY 195 (344)
Q Consensus 122 ~Ga~lp~~s~v~~~~~~L~~~L~gnss~~g~~as~~le~AR~~IA~-~Lga~p---~ey~VV--FTsnaTeAlnlva~sl 195 (344)
-|.+ |-...|+.++++|.+.- .+.+|.+-.-. ..-++.+++ +||.+. ++..|+ =|.|+|.||.+.++-+
T Consensus 40 ~Gk~-pvl~aV~~Ae~~l~~~~-~~k~Yl~i~G~---~~f~~~~~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl 114 (396)
T COG1448 40 DGKT-PVLRAVKKAEKRLLEQE-KTKNYLPIEGL---PEFLEAVQKLLFGADSPALAEDRVATVQTLGGTGALRVAADFL 114 (396)
T ss_pred CCCc-chhHHHHHHHHHhhccc-cccccCCcCCc---HHHHHHHHHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHH
Confidence 4555 66667888888888754 33334332211 122233333 456441 112344 4579999999988765
Q ss_pred CC-CCCC-eEEE--cCCcCHHHHHHHHHcCCcEEEEEeC-CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-c--cc
Q 035915 196 PF-FRGN-FYMT--IIGEELDYVREFASFKESKVILAPE-AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-N--GT 267 (344)
Q Consensus 196 ~~-~~Gd-~ivS--~~eH~~~~ir~la~~~G~kV~~vp~-~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-N--G~ 267 (344)
.. .+.. .+++ .+++|.+.+ ...|.+|..=|. +..+..++.+.+...|..- +...+|.+...+ | |.
T Consensus 115 ~~~~~~~~vwis~PtW~NH~~If----~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a---~~~~vvLLH~CcHNPTG~ 187 (396)
T COG1448 115 ARFFPDATVWISDPTWPNHKAIF----EAAGLEVETYPYYDAETKGLDFDGMLADLKTA---PEGSVVLLHGCCHNPTGI 187 (396)
T ss_pred HHhCCCceEEeCCCCcHhHHHHH----HhcCCceeeeeccccccccccHHHHHHHHHhC---CCCCEEEEecCCCCCCCC
Confidence 32 2222 3454 333333222 346999976553 3333447777777666532 234577777666 6 99
Q ss_pred cccH-HHHHH---HHhCCcEEEeccc-ccCcCCccCCCC---------CCCCcEEEEccccCCCCC-CCceEEEEEe
Q 035915 268 RYSM-HWISE---AHRNSWHVLLDAT-ALVVGEDRLNLA---------LHRPDFVLCNLDNTQNAQ-PSKITCLLIR 329 (344)
Q Consensus 268 i~Pl-~~Ia~---ar~~g~~vlvDAa-Qa~~G~~~LDLs---------~l~~DFvv~S~HK~l~G~-P~GiG~L~Vr 329 (344)
.+.. +|... +++++++.++|-| |.. |.. ++-+ ....=|++.|+-|. ||- =..+|++.+-
T Consensus 188 D~t~~qW~~l~~~~~~r~lip~~D~AYQGF-~~G-leeDa~~lR~~a~~~~~~lva~S~SKn-fgLYgERVGa~~vv 261 (396)
T COG1448 188 DPTEEQWQELADLIKERGLIPFFDIAYQGF-ADG-LEEDAYALRLFAEVGPELLVASSFSKN-FGLYGERVGALSVV 261 (396)
T ss_pred CCCHHHHHHHHHHHHHcCCeeeeehhhhhh-ccc-hHHHHHHHHHHHHhCCcEEEEehhhhh-hhhhhhccceeEEE
Confidence 8888 56653 3899999999965 666 654 4432 12236888899998 441 2358888764
No 370
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=88.58 E-value=5.2 Score=41.25 Aligned_cols=89 Identities=13% Similarity=0.215 Sum_probs=52.3
Q ss_pred HHHHHHhhhcCCCCCeeEEEE-e-Cccc-cccc-cHHHHHH----HHhCCcEEEecccccCcCCcc----CCCCCCCCcE
Q 035915 240 SQLSQYFRRKCKHTPKGLFSY-P-ADIN-GTRY-SMHWISE----AHRNSWHVLLDATALVVGEDR----LNLALHRPDF 307 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~-~-avSN-G~i~-Pl~~Ia~----ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DF 307 (344)
+.+++.+... ..+..-|.+ | .+.+ |.+. |-+.+.. |+++|+++++|=+|.-.|..- .+.-...||+
T Consensus 211 ~~l~~~l~~~--~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv~PDi 288 (460)
T PRK06916 211 EELEELLKEK--HEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENVTPDI 288 (460)
T ss_pred HHHHHHHHhC--CCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCCCCCe
Confidence 4456666521 123444444 4 2444 7765 4455542 578999999999986214321 1112357999
Q ss_pred EEEccccCCCCC--CCceEEEEEeCCCcc
Q 035915 308 VLCNLDNTQNAQ--PSKITCLLIRKKSFD 334 (344)
Q Consensus 308 vv~S~HK~l~G~--P~GiG~L~Vr~~~~~ 334 (344)
+++ =|.|-|| | +|++++++++.+
T Consensus 289 v~~--gK~l~gG~~P--i~av~~~~ei~~ 313 (460)
T PRK06916 289 MTA--GKGLTGGYLP--IAITVTTDEIYN 313 (460)
T ss_pred eee--ehhhhcCccc--cceeeecHHHHH
Confidence 987 4652333 5 899999887654
No 371
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=88.52 E-value=14 Score=37.33 Aligned_cols=90 Identities=13% Similarity=0.094 Sum_probs=51.5
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEE-eCccc-ccccc----HHHHH-HHHhCCcEEEecccccCcCCccCCC----CCCCCc
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYS----MHWIS-EAHRNSWHVLLDATALVVGEDRLNL----ALHRPD 306 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~P----l~~Ia-~ar~~g~~vlvDAaQa~~G~~~LDL----s~l~~D 306 (344)
+.+.+++.+.++ ....|.+ |.+.+ |.+.| +..+. .|+++|+++++|=+|.-.|...--+ ....||
T Consensus 175 d~~~l~~~~~~~----~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pd 250 (408)
T PRK04612 175 DVEALEAAMAGG----DVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPD 250 (408)
T ss_pred CHHHHHHhhCCC----CEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhhhhhcCCCCC
Confidence 456777777531 3444444 44445 55553 33443 3589999999999997324422101 123567
Q ss_pred EEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 307 FVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 307 Fvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
++++ =|. +|+=--+|+++.+++..+
T Consensus 251 i~t~--~K~-l~~G~piga~~~~~~~~~ 275 (408)
T PRK04612 251 IVTL--AKA-LGGGFPIGAMLAGPKVAE 275 (408)
T ss_pred EEEE--cch-hcCCCceEEEEECHHHHh
Confidence 7766 587 552012888888876543
No 372
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=87.42 E-value=24 Score=36.12 Aligned_cols=78 Identities=12% Similarity=0.167 Sum_probs=45.8
Q ss_pred eeEEEE-eCccc-cccccH-HHHH----HHHhCCcEEEecccccCcCCcc--CCCCCC--CCcEEEEccccCCCCCCCce
Q 035915 255 KGLFSY-PADIN-GTRYSM-HWIS----EAHRNSWHVLLDATALVVGEDR--LNLALH--RPDFVLCNLDNTQNAQPSKI 323 (344)
Q Consensus 255 t~LVa~-~avSN-G~i~Pl-~~Ia----~ar~~g~~vlvDAaQa~~G~~~--LDLs~l--~~DFvv~S~HK~l~G~P~Gi 323 (344)
...|.+ |.+.+ |.++|- +.+. .|+++|++++.|=++.-.|... +-+..+ .||.+ ++=|. +++=--+
T Consensus 220 iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~-l~~G~pi 296 (451)
T PRK06918 220 IAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKS-LGAGVPI 296 (451)
T ss_pred eEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCCCCCEE--eeehh-hcCCCcc
Confidence 433333 44445 876664 3233 3588999999999987314322 222223 48966 45687 5521238
Q ss_pred EEEEEeCCCccc
Q 035915 324 TCLLIRKKSFDT 335 (344)
Q Consensus 324 G~L~Vr~~~~~~ 335 (344)
|++++++++.+.
T Consensus 297 g~v~~~~~i~~~ 308 (451)
T PRK06918 297 SGVIGRKEIMDE 308 (451)
T ss_pred EEEEEcHHHHhc
Confidence 999998766543
No 373
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=87.36 E-value=7.6 Score=39.71 Aligned_cols=89 Identities=15% Similarity=0.191 Sum_probs=51.4
Q ss_pred HHHHHHHhhhcCCCCCeeEEEE-eC-ccc-cccc-cHHHHHH----HHhCCcEEEecccccCcCCcc------CCCCCCC
Q 035915 239 GSQLSQYFRRKCKHTPKGLFSY-PA-DIN-GTRY-SMHWISE----AHRNSWHVLLDATALVVGEDR------LNLALHR 304 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~LVa~-~a-vSN-G~i~-Pl~~Ia~----ar~~g~~vlvDAaQa~~G~~~------LDLs~l~ 304 (344)
.+.|++.+... ..+..-|.+ +. +.+ |.+. |-+.+.+ |+++|+++++|=+| . |..+ .+.....
T Consensus 193 l~~l~~~i~~~--~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~-t-G~GrtG~~~a~~~~gv~ 268 (429)
T PRK06173 193 IEPLQDLLEQK--GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-T-GFGRTGKLFALEHAGVV 268 (429)
T ss_pred HHHHHHHHHhC--CCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchh-c-CCCcCCcchHHHhcCCC
Confidence 44466666521 123444444 43 444 7764 4455542 57899999999999 4 4322 1222356
Q ss_pred CcEEEEccccCCCCC-CCceEEEEEeCCCcc
Q 035915 305 PDFVLCNLDNTQNAQ-PSKITCLLIRKKSFD 334 (344)
Q Consensus 305 ~DFvv~S~HK~l~G~-P~GiG~L~Vr~~~~~ 334 (344)
||++++ =|.|-|| . -+++++++++..+
T Consensus 269 PDiv~~--gK~l~gG~~-p~~a~~~~~~i~~ 296 (429)
T PRK06173 269 PDIMCI--GKALTGGYL-TLSATITTEAIAQ 296 (429)
T ss_pred CCEEEe--ehhhhCCcc-ccceEEecHHHHH
Confidence 999985 6773333 1 2678888776543
No 374
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=85.54 E-value=12 Score=38.83 Aligned_cols=88 Identities=16% Similarity=0.261 Sum_probs=53.5
Q ss_pred HHHHHHhhhcCCCCCeeEEEE-e-Cccc-cccccH-HHHH----HHHhCCcEEEeccccc-CcCCcc----CCCCCCCCc
Q 035915 240 SQLSQYFRRKCKHTPKGLFSY-P-ADIN-GTRYSM-HWIS----EAHRNSWHVLLDATAL-VVGEDR----LNLALHRPD 306 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~-~-avSN-G~i~Pl-~~Ia----~ar~~g~~vlvDAaQa-~~G~~~----LDLs~l~~D 306 (344)
+.+++.+... .....-|.+ | .+.+ |.+.|- +.+. .|+++|+++++|=+|. + |..- .+.-...||
T Consensus 224 ~~l~~~~~~~--~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGf-GRtG~~~a~e~~gv~PD 300 (472)
T PRK08742 224 DALQALFEQS--PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGF-GRTGTLFACEQAGVMPD 300 (472)
T ss_pred HHHHHHHHhC--CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCC-CCCccchHHHhcCCCCC
Confidence 4556666421 123444444 4 2444 776654 4443 3578999999999998 4 5422 122245799
Q ss_pred EEEEccccCCCCC--CCceEEEEEeCCCcc
Q 035915 307 FVLCNLDNTQNAQ--PSKITCLLIRKKSFD 334 (344)
Q Consensus 307 Fvv~S~HK~l~G~--P~GiG~L~Vr~~~~~ 334 (344)
+++++ |.|-|| | +|++++++++.+
T Consensus 301 iv~~g--Kgl~gG~~P--laav~~~~ei~~ 326 (472)
T PRK08742 301 LLCLS--KGLTGGFLP--LSAVLATQQLYD 326 (472)
T ss_pred EEEEc--ccccCCCCC--cceeeccHHHHH
Confidence 99994 762232 5 899999887644
No 375
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=85.41 E-value=37 Score=34.40 Aligned_cols=93 Identities=11% Similarity=0.159 Sum_probs=52.4
Q ss_pred HHHHHHHhhhcCCCCCeeEEEE-eCccc-cc-cccHHH---HH-HHHhCCcEEEecccccCcCCcc--CCC--CCCCCcE
Q 035915 239 GSQLSQYFRRKCKHTPKGLFSY-PADIN-GT-RYSMHW---IS-EAHRNSWHVLLDATALVVGEDR--LNL--ALHRPDF 307 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~LVa~-~avSN-G~-i~Pl~~---Ia-~ar~~g~~vlvDAaQa~~G~~~--LDL--s~l~~DF 307 (344)
.+.+++.+.......+...|.+ +.+++ |. ..|-+. +. .|+++|+++++|=+|.-.|..- +-. -...+|+
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDi 262 (421)
T PRK06777 183 LSSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDL 262 (421)
T ss_pred HHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCE
Confidence 4456666642111123444444 44444 75 456443 33 3588999999999987214321 111 1346897
Q ss_pred EEEccccCCCCCC-CceEEEEEeCCCccc
Q 035915 308 VLCNLDNTQNAQP-SKITCLLIRKKSFDT 335 (344)
Q Consensus 308 vv~S~HK~l~G~P-~GiG~L~Vr~~~~~~ 335 (344)
++ +=|. ++ + --+|+++.++++.+.
T Consensus 263 v~--~sK~-l~-~G~pigav~~~~~i~~~ 287 (421)
T PRK06777 263 IT--MAKS-LG-GGMPISAVVGRAEVMDA 287 (421)
T ss_pred Ee--eehh-hc-CCCceEEEEEcHHHHhc
Confidence 75 5687 65 3 128999988766543
No 376
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=85.18 E-value=7.6 Score=39.65 Aligned_cols=185 Identities=12% Similarity=0.050 Sum_probs=104.0
Q ss_pred HHHHHHhhccCCCChhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCC----CCCCCeEEEcCCcCH
Q 035915 136 PSRLLDILTKKSSFPGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYP----FFRGNFYMTIIGEEL 211 (344)
Q Consensus 136 ~~~L~~~L~gnss~~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~----~~~Gd~ivS~~eH~~ 211 (344)
.+.|..++.|.-.|.|+..--.+.+ .+-+.||. + -++=|.-+..|=|++..-+- ..+|+..+.....|-
T Consensus 62 ~~qwaamm~GDEAYagsrs~~~L~~---avkdifGf---q-~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~F 134 (471)
T COG3033 62 DKQWAAMMRGDEAYAGSRSYYALAD---AVKDIFGF---Q-YTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHF 134 (471)
T ss_pred HHHHHHHhccchhhcccccHHHHHH---HHHHhcCc---e-eeeeccCCccHHHHHHHHHhhhccccCCcccccccccee
Confidence 4567778888877777766444433 35556675 2 46778777767665544321 124533222212222
Q ss_pred HHHHHHHHcCCcEEEEEeCCC---------CCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc---cccccHHHH---HH
Q 035915 212 DYVREFASFKESKVILAPEAW---------LDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN---GTRYSMHWI---SE 276 (344)
Q Consensus 212 ~~ir~la~~~G~kV~~vp~~~---------~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN---G~i~Pl~~I---a~ 276 (344)
++-+.-.+..|+..+-++.+. -.|.+|.+.|++++.... ....-.++++..+| |.-..++-+ .+
T Consensus 135 dTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG-~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ 213 (471)
T COG3033 135 DTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVG-ADNVPYIVLTITNNSAGGQPVSMANMKAVYE 213 (471)
T ss_pred cchhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhC-cccCcEEEEEEeccccCCCcchHHhHHHHHH
Confidence 222333344565554443321 136789999999987531 12344555555555 665555444 33
Q ss_pred -HHhCCcEEEecccccCcCCc------cCCCCC-----------CCCcEEEEccccCCCCCCCce-EEEEEeCCC
Q 035915 277 -AHRNSWHVLLDATALVVGED------RLNLAL-----------HRPDFVLCNLDNTQNAQPSKI-TCLLIRKKS 332 (344)
Q Consensus 277 -ar~~g~~vlvDAaQa~~G~~------~LDLs~-----------l~~DFvv~S~HK~l~G~P~Gi-G~L~Vr~~~ 332 (344)
++++++.|+.|++-.+ -.. .-.-.+ ..+|-.+.|+-|= | -..+ |+|..+++.
T Consensus 214 ia~ky~ipvv~Da~Rfa-ENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD--~-lvnmGGfl~~~D~~ 284 (471)
T COG3033 214 IAKKYDIPVVMDAARFA-ENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKD--G-LVNMGGFLCFKDDS 284 (471)
T ss_pred HHHHcCCcEEeehhhhh-hhhhhhhhcCcccccccHHHHHHHHHhhhhhheeecccc--c-eeccccEEEecCcc
Confidence 5889999999998765 211 111111 2489999999995 3 2234 455667664
No 377
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=84.94 E-value=18 Score=37.25 Aligned_cols=169 Identities=14% Similarity=0.086 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhh-CCC--C-C--CC-eEEEcC-CcC--HHHHHHHHHcCCcEEEE
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGES-YPF--F-R--GN-FYMTII-GEE--LDYVREFASFKESKVIL 227 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~s-l~~--~-~--Gd-~ivS~~-eH~--~~~ir~la~~~G~kV~~ 227 (344)
..++-+.+.+.++-...+ .|.|..++|||+..++.. +.+ . . +. .++... .+| ....-..+...+. -
T Consensus 100 av~l~~~l~~~~~~~~~~-rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y---~ 175 (433)
T KOG1401|consen 100 AVELEEVLSAVLGKGSAE-RVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKY---G 175 (433)
T ss_pred HHHHHHHHHhcccCCCcc-EEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhccccc---C
Confidence 555666777777433223 799999999998876652 211 1 1 11 244221 233 2211111111111 1
Q ss_pred EeCCCC--C---C-ccCHHHHHHHhhhcCCCCCe-eEEEEeCccccccccH--HHH----HHHHhCCcEEEecccccCcC
Q 035915 228 APEAWL--D---L-RIKGSQLSQYFRRKCKHTPK-GLFSYPADINGTRYSM--HWI----SEAHRNSWHVLLDATALVVG 294 (344)
Q Consensus 228 vp~~~~--~---g-~i~~~~L~~~l~~~~~~~~t-~LVa~~avSNG~i~Pl--~~I----a~ar~~g~~vlvDAaQa~~G 294 (344)
+|.+.. + . -=+..+|+++++... ... .++.=|.+-+|-+.|. +-+ .+|+++|++++.|=+|. |
T Consensus 176 ~~~~p~~p~v~~~~ynd~t~l~k~~~~h~--~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~t--G 251 (433)
T KOG1401|consen 176 LPFDPIAPDVVTAEYNDSTALEKLFESHK--GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT--G 251 (433)
T ss_pred CCCCCCCCceeecccCCHHHHHHHHHhCC--CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhh--C
Confidence 121100 0 0 014678888887642 122 3444455545666666 322 24688999999999987 2
Q ss_pred CccCCCC------CCCCcEEEEccccCCCCCCCceEEEEEeCCCccccc
Q 035915 295 EDRLNLA------LHRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDTST 337 (344)
Q Consensus 295 ~~~LDLs------~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~~~ 337 (344)
-.++-.- ...||.+++. |. +|+=--+|+..+++++.+.-+
T Consensus 252 ~gR~g~~~a~e~~~~~PDI~t~a--K~-L~gGlPigA~~v~~kV~~~i~ 297 (433)
T KOG1401|consen 252 LGRLGYGWAQEYFGVTPDITTVA--KP-LGGGLPIGATGVRDKVAEMIS 297 (433)
T ss_pred ccccchHHHHHHhCcCCcceeeh--hh-ccCCceeEEEeehHHHHhhcC
Confidence 2232211 1468988764 76 333244999999998887633
No 378
>PRK06148 hypothetical protein; Provisional
Probab=84.81 E-value=22 Score=40.57 Aligned_cols=71 Identities=10% Similarity=0.100 Sum_probs=47.1
Q ss_pred eCccc-ccccc----HHHHH-HHHhCCcEEEeccccc-CcCCcc-----CCCCCCCCcEEEEccccCCCCCCCceEEEEE
Q 035915 261 PADIN-GTRYS----MHWIS-EAHRNSWHVLLDATAL-VVGEDR-----LNLALHRPDFVLCNLDNTQNAQPSKITCLLI 328 (344)
Q Consensus 261 ~avSN-G~i~P----l~~Ia-~ar~~g~~vlvDAaQa-~~G~~~-----LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~V 328 (344)
+.+.+ |.+.| ++.+. .|+++|+++++|=+|. + |..- .......||++++ =|. +|+=.-+|+++.
T Consensus 792 Pv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGf-GRtG~~~~a~e~~gv~PDivt~--gK~-lggG~Plgav~~ 867 (1013)
T PRK06148 792 SIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGF-GRVGSHWWAFETQGVVPDIVTM--GKP-IGNGHPMGAVVT 867 (1013)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCC-CCCCCcchhhhhcCCCcceeee--ccc-ccCCcceEEEEE
Confidence 45555 88877 45554 3689999999999996 4 4321 1112457999888 476 443123899999
Q ss_pred eCCCccc
Q 035915 329 RKKSFDT 335 (344)
Q Consensus 329 r~~~~~~ 335 (344)
+++..+.
T Consensus 868 ~~ei~~~ 874 (1013)
T PRK06148 868 TREIADS 874 (1013)
T ss_pred cHHHHhh
Confidence 9876543
No 379
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=83.47 E-value=19 Score=37.12 Aligned_cols=143 Identities=13% Similarity=0.223 Sum_probs=79.3
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCeEEEcCCcCHH-HHHHHHHcCCcEEEEEeCCCCCCcc
Q 035915 159 IQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNFYMTIIGEELD-YVREFASFKESKVILAPEAWLDLRI 237 (344)
Q Consensus 159 e~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~ivS~~eH~~~-~ir~la~~~G~kV~~vp~~~~~g~i 237 (344)
-+.-++||+|+|+.. .|++..|-+. ++-++-+|- ++||.+..... ++ +++.-.+-.-.++.+..-+
T Consensus 142 ldlE~~iakF~G~E~---aivYs~gF~t-i~S~ipafs-KrGDIi~~de~--~nfaIq~GlqlSRS~i~~Fkhn------ 208 (467)
T KOG1358|consen 142 LDLEKRIAKFMGTED---AIVYSYGFST-IESAIPAFS-KRGDIIFVDEA--VNFAIQKGLQLSRSTISYFKHN------ 208 (467)
T ss_pred cccHHHHHHhhCCcc---eeeeccccch-hhhcchhhh-ccCcEEEEehh--hhHHHHHHHhhhhheeEEecCC------
Confidence 345677999999963 4777665543 333444442 47887664433 22 2221111112345554432
Q ss_pred CHHHHHHHhhhc----CCCC---CeeEEE-EeCcc-c-cccccHHHHHH-HHhCCcEEEecccccCcCCcc---------
Q 035915 238 KGSQLSQYFRRK----CKHT---PKGLFS-YPADI-N-GTRYSMHWISE-AHRNSWHVLLDATALVVGEDR--------- 297 (344)
Q Consensus 238 ~~~~L~~~l~~~----~~~~---~t~LVa-~~avS-N-G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~--------- 297 (344)
+.++|+..+..+ .|++ .++-|. .-+.. | |.+.|+..|-+ ..++...+++|=+-+. |...
T Consensus 209 dm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~Sf-G~lg~~GrGvteH 287 (467)
T KOG1358|consen 209 DMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSF-GVLGKTGRGVTEH 287 (467)
T ss_pred CHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEeccccc-ccccccCcccccc
Confidence 334554444221 1222 223333 33443 6 99999966654 4678899999988776 5432
Q ss_pred CCCCCCCCcEEEEccccC
Q 035915 298 LNLALHRPDFVLCNLDNT 315 (344)
Q Consensus 298 LDLs~l~~DFvv~S~HK~ 315 (344)
..+..-.+|.+++|.---
T Consensus 288 ~~v~~~~iDiv~~sm~~a 305 (467)
T KOG1358|consen 288 FGVPITDIDIVTASMETA 305 (467)
T ss_pred CCCCccceeeeeeccccc
Confidence 122224689999998776
No 380
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=80.98 E-value=73 Score=32.97 Aligned_cols=91 Identities=11% Similarity=0.098 Sum_probs=52.6
Q ss_pred HHHHHHHhhhcC-CCCCeeEEEE-eCccc-ccccc-HHHHH----HHHhCCcEEEecccccCcCCcc----CCCCCCCCc
Q 035915 239 GSQLSQYFRRKC-KHTPKGLFSY-PADIN-GTRYS-MHWIS----EAHRNSWHVLLDATALVVGEDR----LNLALHRPD 306 (344)
Q Consensus 239 ~~~L~~~l~~~~-~~~~t~LVa~-~avSN-G~i~P-l~~Ia----~ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~D 306 (344)
.+.+++.+.... ......-|.+ |.+.+ |.+.| -+.+. .|+++|+++++|=+|.-.|..- .+.-...||
T Consensus 215 ~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv~PD 294 (464)
T PRK06938 215 LHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPD 294 (464)
T ss_pred HHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCCCCC
Confidence 355666665310 0012333333 44545 77765 34443 3588999999999998214221 111235699
Q ss_pred EEEEccccCCCCCCCceEEEEEeCCC
Q 035915 307 FVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 307 Fvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
+++++ |. +|+=--+|+++.+++.
T Consensus 295 iv~~g--Kg-lggG~PlsAv~~~~~~ 317 (464)
T PRK06938 295 VVVLS--KA-IGGSLPLAVVVYREWL 317 (464)
T ss_pred EEEee--cc-ccCCCceEEEeehhHh
Confidence 99995 66 3321228999998774
No 381
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=80.75 E-value=13 Score=40.71 Aligned_cols=147 Identities=16% Similarity=0.112 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCe-EEEcCCcC--HHHHHHHHHcCCcEEEEEeCCCCC
Q 035915 158 EIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNF-YMTIIGEE--LDYVREFASFKESKVILAPEAWLD 234 (344)
Q Consensus 158 le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~-ivS~~eH~--~~~ir~la~~~G~kV~~vp~~~~~ 234 (344)
+-+-+.-|+++-|.+-.. --+---+|.|-..++-++...++.. ++...-|+ ...++.-++..|++|...+...
T Consensus 165 llNyQTmi~dlTGL~~aN--ASLLDEgTAaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~~~~~-- 240 (1001)
T KOG2040|consen 165 LLNYQTMITDLTGLPMAN--ASLLDEGTAAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVSDIKE-- 240 (1001)
T ss_pred HhhhHHhhhhccCCcccc--hhhhccchhHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEecCHHH--
Confidence 345566788888875331 2222333443333333333334444 45566677 3345554555666655443211
Q ss_pred CccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHH-HHHHhCCcEEEecccccCcCCccC-CCCCCCCcEEEEcc
Q 035915 235 LRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWI-SEAHRNSWHVLLDATALVVGEDRL-NLALHRPDFVLCNL 312 (344)
Q Consensus 235 g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~I-a~ar~~g~~vlvDAaQa~~G~~~L-DLs~l~~DFvv~S~ 312 (344)
++ ...++ -.-.||-++.. -|.+.|.+.+ +.+|.+|.++++ |+-.+ ...-| .-.++++|..+.|.
T Consensus 241 --~~------~s~~~---v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~-atDLL-aLtiLrpPgefGaDIavGSs 306 (1001)
T KOG2040|consen 241 --AD------YSSKD---VSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVM-ATDLL-ALTILRPPGEFGADIAVGSS 306 (1001)
T ss_pred --hh------ccccc---eeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEE-eehhh-HHHccCChhhcCceeeeccc
Confidence 00 01110 01234444421 2999999655 557999988765 44443 21111 12368999999999
Q ss_pred ccCCCCCCCceE
Q 035915 313 DNTQNAQPSKIT 324 (344)
Q Consensus 313 HK~l~G~P~GiG 324 (344)
.. ||.|.|-|
T Consensus 307 QR--FGVPlGYG 316 (1001)
T KOG2040|consen 307 QR--FGVPLGYG 316 (1001)
T ss_pred cc--cCccccCC
Confidence 99 57776644
No 382
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=80.10 E-value=77 Score=32.71 Aligned_cols=71 Identities=14% Similarity=0.253 Sum_probs=43.1
Q ss_pred EEEeCccc-cccccH-HHHH----HHHhCCcEEEecccccCcCCcc----CCCCCCCCcEEEEccccCCC-CCCCceEEE
Q 035915 258 FSYPADIN-GTRYSM-HWIS----EAHRNSWHVLLDATALVVGEDR----LNLALHRPDFVLCNLDNTQN-AQPSKITCL 326 (344)
Q Consensus 258 Va~~avSN-G~i~Pl-~~Ia----~ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DFvv~S~HK~l~-G~P~GiG~L 326 (344)
+.=|.+.+ |.+.|- +.+. .|+++|+++++|=+|.-.|..- ...-...||+++++ |.|- |+| +|++
T Consensus 230 I~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~g--K~l~gG~P--i~av 305 (459)
T PRK06931 230 ILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVMS--KAVGGGLP--LAVL 305 (459)
T ss_pred EEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCCCCCEEEec--ccccCCcc--eeee
Confidence 33355555 776653 4443 3578999999999998214221 11123579999984 6522 225 7788
Q ss_pred EEeCCC
Q 035915 327 LIRKKS 332 (344)
Q Consensus 327 ~Vr~~~ 332 (344)
..+++.
T Consensus 306 ~~~~~~ 311 (459)
T PRK06931 306 GIKKEF 311 (459)
T ss_pred eeHHHH
Confidence 777653
No 383
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=78.86 E-value=40 Score=34.35 Aligned_cols=91 Identities=11% Similarity=0.101 Sum_probs=49.9
Q ss_pred HHHHHHHhhhcCCCCCeeEEEEeCc-c-c-ccccc-HHHH---H-HHHhCCcEEEeccccc-CcCCcc----CCCCCCCC
Q 035915 239 GSQLSQYFRRKCKHTPKGLFSYPAD-I-N-GTRYS-MHWI---S-EAHRNSWHVLLDATAL-VVGEDR----LNLALHRP 305 (344)
Q Consensus 239 ~~~L~~~l~~~~~~~~t~LVa~~av-S-N-G~i~P-l~~I---a-~ar~~g~~vlvDAaQa-~~G~~~----LDLs~l~~ 305 (344)
.+++++.+... ..+...|.+--+ + + |.+.| .+.+ . .|+++|+++++|=+|. + |..- .+...+.|
T Consensus 194 ~~~l~~~l~~~--~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~-Gr~G~~~~~~~~~v~p 270 (427)
T TIGR00508 194 ITPLAKLMELH--SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGF-GRTGKLFACEHAGVVP 270 (427)
T ss_pred HHHHHHHHHhc--CCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCC-CcCCccchhhhcCCCC
Confidence 34566666532 123444444432 4 4 55443 3444 3 3588999999999994 2 3211 11224579
Q ss_pred cEEEEccccCCCCCCCceEEEEEeCCCcc
Q 035915 306 DFVLCNLDNTQNAQPSKITCLLIRKKSFD 334 (344)
Q Consensus 306 DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~ 334 (344)
|++++ =|.|-||=.-+++++.++++.+
T Consensus 271 Di~~~--gK~l~gG~~p~~a~~~~~~~~~ 297 (427)
T TIGR00508 271 DILCV--GKALTGGYMTLSATVTTDKVAQ 297 (427)
T ss_pred CEEEe--chhhhcCcccceEEEEcHHHHH
Confidence 98885 6773332012577777765533
No 384
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=75.55 E-value=1e+02 Score=31.57 Aligned_cols=73 Identities=19% Similarity=0.322 Sum_probs=45.6
Q ss_pred eeEEEEeCccc-cccc-cHHHHH---H-HHhCCcEEEeccccc-CcCCcc--CC--CCCCCCcEEEEccccCCCCCCCce
Q 035915 255 KGLFSYPADIN-GTRY-SMHWIS---E-AHRNSWHVLLDATAL-VVGEDR--LN--LALHRPDFVLCNLDNTQNAQPSKI 323 (344)
Q Consensus 255 t~LVa~~avSN-G~i~-Pl~~Ia---~-ar~~g~~vlvDAaQa-~~G~~~--LD--Ls~l~~DFvv~S~HK~l~G~P~Gi 323 (344)
..++.-+.+.| |.+. |-+.+. + |+++|+++++|=+|. + |..- +- --...||.+++ =|. +|+=--+
T Consensus 208 aavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGf-GRtG~~~a~~~~gv~PDiv~~--gK~-l~~G~Pi 283 (442)
T TIGR00709 208 AAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGF-GRSGTMFAFEHAGIEPDFVVM--SKA-VGGGLPL 283 (442)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCC-CCCCchhHHHHcCCCCcEEEE--ccc-ccCCccc
Confidence 34555565555 6654 445443 2 578999999999988 4 5321 11 11356999996 476 4431128
Q ss_pred EEEEEeCC
Q 035915 324 TCLLIRKK 331 (344)
Q Consensus 324 G~L~Vr~~ 331 (344)
|+++++++
T Consensus 284 gav~~~~~ 291 (442)
T TIGR00709 284 AVLLIAPE 291 (442)
T ss_pred EEEEEchH
Confidence 99999877
No 385
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=63.35 E-value=40 Score=27.62 Aligned_cols=90 Identities=12% Similarity=-0.000 Sum_probs=53.5
Q ss_pred HHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccH-HHHHHHHhC---CcEEEec
Q 035915 212 DYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSM-HWISEAHRN---SWHVLLD 287 (344)
Q Consensus 212 ~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl-~~Ia~ar~~---g~~vlvD 287 (344)
..+..+.+..|++|..+.. .+..+++.+.+.+. +..+|.++...+-....+ +.+.++|+. ++.+++=
T Consensus 17 ~~~~~~l~~~G~~V~~lg~-----~~~~~~l~~~~~~~----~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~vG 87 (119)
T cd02067 17 NIVARALRDAGFEVIDLGV-----DVPPEEIVEAAKEE----DADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVLVG 87 (119)
T ss_pred HHHHHHHHHCCCEEEECCC-----CCCHHHHHHHHHHc----CCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEEEE
Confidence 3455666778999977643 24566776666542 456888875544344444 455556553 5777776
Q ss_pred ccccCcCCccCCCCCCCCcEEEEcc
Q 035915 288 ATALVVGEDRLNLALHRPDFVLCNL 312 (344)
Q Consensus 288 AaQa~~G~~~LDLs~l~~DFvv~S~ 312 (344)
+.+.. . .+=-+...++|.++-.+
T Consensus 88 G~~~~-~-~~~~~~~~G~D~~~~~~ 110 (119)
T cd02067 88 GAIVT-R-DFKFLKEIGVDAYFGPA 110 (119)
T ss_pred CCCCC-h-hHHHHHHcCCeEEECCH
Confidence 66554 2 11124557888877543
No 386
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=63.05 E-value=68 Score=31.77 Aligned_cols=138 Identities=14% Similarity=0.136 Sum_probs=82.7
Q ss_pred CCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCe-EE-EcCCcCHHHHHH-HHHcCCcEEEEEeCCCCCCccCHHHHHHHh
Q 035915 170 GLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNF-YM-TIIGEELDYVRE-FASFKESKVILAPEAWLDLRIKGSQLSQYF 246 (344)
Q Consensus 170 ga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~-iv-S~~eH~~~~ir~-la~~~G~kV~~vp~~~~~g~i~~~~L~~~l 246 (344)
+.+++ .|...-|+-|.+.++.++. .-+|.+ |+ ..-.+. |-. -|.-.+++|+.+|.+. +..++.+.+.+.+
T Consensus 83 pLt~d--nic~GvGsDE~ID~iiR~~-c~PGkeKIl~cPPtys---MY~v~A~iNd~eVvkvpl~p-dF~lnvdai~evl 155 (375)
T KOG0633|consen 83 PLTSD--NICVGVGSDELIDLIIRCV-CDPGKEKILDCPPTYS---MYVVDAAINDAEVVKVPLNP-DFSLNVDAIAEVL 155 (375)
T ss_pred CCCcc--ceEEecCcHHHHHHHHhhe-ecCCccceeecCCcce---eEEEEeecCCceEEEecCCC-CccccHHHHHHHH
Confidence 45555 6888889999999998865 236643 42 222111 110 1334689999999876 5778888888887
Q ss_pred hhcCCCCCeeEEEEeCccc--cccccHHHHHHHHh--CCcEEEeccccc-CcC-CccCCCCCCCCcEEEE-ccccCCCC
Q 035915 247 RRKCKHTPKGLFSYPADIN--GTRYSMHWISEAHR--NSWHVLLDATAL-VVG-EDRLNLALHRPDFVLC-NLDNTQNA 318 (344)
Q Consensus 247 ~~~~~~~~t~LVa~~avSN--G~i~Pl~~Ia~ar~--~g~~vlvDAaQa-~~G-~~~LDLs~l~~DFvv~-S~HK~l~G 318 (344)
..+. ..+++-++.-.| |.+.-.+.|.++-+ -+.+|+||-|=. ++| ...+.|-.-.+..+++ .+-|- ||
T Consensus 156 ~~ds---~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKs-fG 230 (375)
T KOG0633|consen 156 ELDS---KIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKS-FG 230 (375)
T ss_pred hccc---cceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhh-cC
Confidence 6432 345555554445 99998888876644 367888886421 002 1122222223555444 56676 66
No 387
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=62.94 E-value=94 Score=28.87 Aligned_cols=93 Identities=11% Similarity=0.030 Sum_probs=55.3
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccH-HHHHHHHhC--CcEEEec
Q 035915 211 LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSM-HWISEAHRN--SWHVLLD 287 (344)
Q Consensus 211 ~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl-~~Ia~ar~~--g~~vlvD 287 (344)
.+.+..+.+..|++|+++-.+ +..+++.+.+.+. +..+|+++...+-+...+ +.+.++++. ++.+++=
T Consensus 105 ~~iv~~~l~~~G~~Vi~LG~~-----vp~e~~v~~~~~~----~~~~V~lS~~~~~~~~~~~~~i~~L~~~~~~~~i~vG 175 (213)
T cd02069 105 KNLVGVILSNNGYEVIDLGVM-----VPIEKILEAAKEH----KADIIGLSGLLVPSLDEMVEVAEEMNRRGIKIPLLIG 175 (213)
T ss_pred HHHHHHHHHhCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEccchhccHHHHHHHHHHHHhcCCCCeEEEE
Confidence 455566677889999987543 4567777776642 467888886655555555 455666554 5666664
Q ss_pred ccccCcCCc--cCCC-CCCCCcEEEEccc
Q 035915 288 ATALVVGED--RLNL-ALHRPDFVLCNLD 313 (344)
Q Consensus 288 AaQa~~G~~--~LDL-s~l~~DFvv~S~H 313 (344)
++..- -.. .+++ ...++|+++-++.
T Consensus 176 G~~~~-~~~~~~~~~~~~~gad~y~~da~ 203 (213)
T cd02069 176 GAATS-RKHTAVKIAPEYDGPVVYVKDAS 203 (213)
T ss_pred ChhcC-HHHHhhhhccccCCCceEecCHH
Confidence 43211 000 0001 2368999986654
No 388
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=56.42 E-value=31 Score=35.12 Aligned_cols=87 Identities=13% Similarity=0.116 Sum_probs=51.4
Q ss_pred CHHHHHHHhhhcCCCCCeeEEEEeCccccccc---cHHHHHH-HHhCCcEEEecccccCcCCccCC--CC---CCCCcEE
Q 035915 238 KGSQLSQYFRRKCKHTPKGLFSYPADINGTRY---SMHWISE-AHRNSWHVLLDATALVVGEDRLN--LA---LHRPDFV 308 (344)
Q Consensus 238 ~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~---Pl~~Ia~-ar~~g~~vlvDAaQa~~G~~~LD--Ls---~l~~DFv 308 (344)
+.++|++.+... ..+...|.+-.+ .|... .++.+.+ |+++|+++++|-+| . |...-- .. ...||++
T Consensus 173 d~~~l~~~l~~~--~~~~aavi~Epv-~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~-t-G~~~~~~g~~~~~gv~PDi~ 247 (431)
T PRK06209 173 DIASLEALFEDH--PGRIACVILEPA-TADEPQDGFLHEVRRLCHENGALFILDEMI-T-GFRWHMRGAQKLYGIVPDLS 247 (431)
T ss_pred CHHHHHHHHHhC--CCCEEEEEEccc-cCCCCCHHHHHHHHHHHHHcCCEEEEEccc-c-cCCcCcchhhHHhCCCccee
Confidence 467788887532 123444444322 23333 2555544 68999999999999 4 542210 11 2468987
Q ss_pred EEccccCCCCC--CCceEEEEEeCCCcc
Q 035915 309 LCNLDNTQNAQ--PSKITCLLIRKKSFD 334 (344)
Q Consensus 309 v~S~HK~l~G~--P~GiG~L~Vr~~~~~ 334 (344)
++ =|. +|+ | +|++..+++..+
T Consensus 248 t~--gK~-lggG~p--~~av~~~~~i~~ 270 (431)
T PRK06209 248 CF--GKA-LGNGFA--VSALAGKREYME 270 (431)
T ss_pred ee--hhh-hcCCcc--cEEEEEHHHHHh
Confidence 66 587 554 5 778888776544
No 389
>COG2075 RPL24A Ribosomal protein L24E [Translation, ribosomal structure and biogenesis]
Probab=49.08 E-value=12 Score=28.89 Aligned_cols=20 Identities=5% Similarity=0.001 Sum_probs=16.2
Q ss_pred EEccccCCCCCCCceEEEEEeCCC
Q 035915 309 LCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 309 v~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
.|+++++ +.|.|.+||+++-
T Consensus 7 sFcG~~I----~PGtG~m~Vr~Dg 26 (66)
T COG2075 7 SFCGKKI----EPGTGIMYVRNDG 26 (66)
T ss_pred cCcCCcc----CCCceEEEEecCC
Confidence 4778887 4599999999874
No 390
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=45.45 E-value=2e+02 Score=24.79 Aligned_cols=72 Identities=3% Similarity=-0.131 Sum_probs=44.0
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccH-HHHHHHHhC---CcEEEe
Q 035915 211 LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSM-HWISEAHRN---SWHVLL 286 (344)
Q Consensus 211 ~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl-~~Ia~ar~~---g~~vlv 286 (344)
.+.+..+.+..|++|+++-.+ +..+++.+..... +..+|+++..++.....+ +++.++++. ++.+++
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~-----vp~e~i~~~a~~~----~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~v 90 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVM-----TSQEEFIDAAIET----DADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLYV 90 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEEE
Confidence 344555667889999987543 4566776666542 467888886554333334 455556554 666766
Q ss_pred ccccc
Q 035915 287 DATAL 291 (344)
Q Consensus 287 DAaQa 291 (344)
=++-.
T Consensus 91 GG~~~ 95 (137)
T PRK02261 91 GGNLV 95 (137)
T ss_pred ECCCC
Confidence 55443
No 391
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=44.22 E-value=2e+02 Score=24.95 Aligned_cols=89 Identities=6% Similarity=-0.047 Sum_probs=51.0
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHHH-HHHHhC---CcEEEe
Q 035915 211 LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHWI-SEAHRN---SWHVLL 286 (344)
Q Consensus 211 ~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~I-a~ar~~---g~~vlv 286 (344)
.+.+..+.+..|++|+.+..+ ...+++.+...+. +..++.++..++.+...+..+ .++++. +..+++
T Consensus 18 k~iv~~~l~~~GfeVi~LG~~-----v~~e~~v~aa~~~----~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~viv 88 (134)
T TIGR01501 18 NKILDHAFTNAGFNVVNLGVL-----SPQEEFIKAAIET----KADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLYV 88 (134)
T ss_pred HHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEEe
Confidence 455666677789999987654 3556666555432 456888886654443344433 456665 455666
Q ss_pred cccccCcCCccCC-----CCCCCCcEEE
Q 035915 287 DATALVVGEDRLN-----LALHRPDFVL 309 (344)
Q Consensus 287 DAaQa~~G~~~LD-----Ls~l~~DFvv 309 (344)
=++-.+ +..+.. |.++++|-+.
T Consensus 89 GG~~vi-~~~d~~~~~~~l~~~Gv~~vF 115 (134)
T TIGR01501 89 GGNLVV-GKQDFPDVEKRFKEMGFDRVF 115 (134)
T ss_pred cCCcCc-ChhhhHHHHHHHHHcCCCEEE
Confidence 555444 333222 4555665543
No 392
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=39.99 E-value=3.7e+02 Score=26.37 Aligned_cols=114 Identities=14% Similarity=0.049 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHHcC--CCCCCCeEEEeCCHHH-HHHHHHhhCCCCCCCeEEEcCCcC----HHHHHHHHHcCCcEEEEEe
Q 035915 157 PEIQARNKVLKHCG--LPDDEYLVLFTPNYRD-AMMLVGESYPFFRGNFYMTIIGEE----LDYVREFASFKESKVILAP 229 (344)
Q Consensus 157 ~le~AR~~IA~~Lg--a~p~ey~VVFTsnaTe-Alnlva~sl~~~~Gd~ivS~~eH~----~~~ir~la~~~G~kV~~vp 229 (344)
.+++++++|+++-- .... ++|+|-+.+. .++.+.....-.+...++..-..+ ....++|. +.|+.+..++
T Consensus 102 e~~~~~~~I~~~a~~~i~~g--~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~-~~GI~vtlI~ 178 (310)
T PRK08535 102 SSENAVEKIGEIGAKRIRDG--DVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELA-EYGIPVTLIV 178 (310)
T ss_pred HHHHHHHHHHHHHHHHcCCC--CEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHH-HCCCCEEEEe
Confidence 45667777765432 1223 5899965443 444443333211222333221223 22334444 4699998887
Q ss_pred CCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-c-cccccH--HHHHH-HHhCCcEEEe
Q 035915 230 EAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-N-GTRYSM--HWISE-AHRNSWHVLL 286 (344)
Q Consensus 230 ~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-N-G~i~Pl--~~Ia~-ar~~g~~vlv 286 (344)
... +...+.+ . ..-++....+. | |.+..+ ..++. ||.++++|+|
T Consensus 179 Dsa---------v~~~m~~-v---d~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 179 DSA---------VRYFMKD-V---DKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred hhH---------HHHHHHh-C---CEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 432 2223322 1 23344333333 6 455555 35554 4888888876
No 393
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=38.14 E-value=2.1e+02 Score=22.92 Aligned_cols=89 Identities=10% Similarity=0.126 Sum_probs=52.7
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccH-HHHHHHHhC--CcEEEec
Q 035915 211 LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSM-HWISEAHRN--SWHVLLD 287 (344)
Q Consensus 211 ~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl-~~Ia~ar~~--g~~vlvD 287 (344)
...+..+.++.|.+|..+..+ +..+++.+.+... +..+|+++...+...... +.+..+|+. ++.+++=
T Consensus 17 l~~la~~l~~~G~~v~~~d~~-----~~~~~l~~~~~~~----~pd~V~iS~~~~~~~~~~~~l~~~~k~~~p~~~iv~G 87 (121)
T PF02310_consen 17 LLYLAAYLRKAGHEVDILDAN-----VPPEELVEALRAE----RPDVVGISVSMTPNLPEAKRLARAIKERNPNIPIVVG 87 (121)
T ss_dssp HHHHHHHHHHTTBEEEEEESS-----B-HHHHHHHHHHT----TCSEEEEEESSSTHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred HHHHHHHHHHCCCeEEEECCC-----CCHHHHHHHHhcC----CCcEEEEEccCcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 334555667789999988654 3446777776542 356788875334444444 344455554 8899997
Q ss_pred ccccCcCCccCC-CCC-CCCcEEEE
Q 035915 288 ATALVVGEDRLN-LAL-HRPDFVLC 310 (344)
Q Consensus 288 AaQa~~G~~~LD-Ls~-l~~DFvv~ 310 (344)
+.+.- . .+=. ++. .++|+++.
T Consensus 88 G~~~t-~-~~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 88 GPHAT-A-DPEEILREYPGIDYVVR 110 (121)
T ss_dssp ESSSG-H-HHHHHHHHHHTSEEEEE
T ss_pred CCchh-c-ChHHHhccCcCcceecC
Confidence 77643 1 1111 222 46788765
No 394
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=37.73 E-value=4e+02 Score=26.07 Aligned_cols=115 Identities=10% Similarity=0.042 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHcC--CCCCCCeEEEeCCHHH-HHHHHHhhCCCCCCCeEEEcCCcC----HHHHHHHHHcCCcEEEEE
Q 035915 156 IPEIQARNKVLKHCG--LPDDEYLVLFTPNYRD-AMMLVGESYPFFRGNFYMTIIGEE----LDYVREFASFKESKVILA 228 (344)
Q Consensus 156 ~~le~AR~~IA~~Lg--a~p~ey~VVFTsnaTe-Alnlva~sl~~~~Gd~ivS~~eH~----~~~ir~la~~~G~kV~~v 228 (344)
+.+++++++|+++-- .... ++|+|-+.+. .+..+.....-.+...++..-..+ ....++|. +.|+.+..+
T Consensus 96 ~e~~~a~~~I~~~a~~~i~~g--~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~~a~~L~-~~gI~vtlI 172 (301)
T TIGR00511 96 NQSDKAQERIGEIGAKRIRDG--DVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHITAKELR-DYGIPVTLI 172 (301)
T ss_pred HHHHHHHHHHHHHHHHHcCCC--CEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHHHHHHHH-HCCCCEEEE
Confidence 345777777765432 1223 5899965443 444443333211222332111122 22334444 469999888
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-c-cccccH--HHHHH-HHhCCcEEEe
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-N-GTRYSM--HWISE-AHRNSWHVLL 286 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-N-G~i~Pl--~~Ia~-ar~~g~~vlv 286 (344)
+.. .+...+.+ . ..-++....+. | |.+..+ ..++. ||.++++|+|
T Consensus 173 ~Ds---------a~~~~m~~-v---d~VivGad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 173 VDS---------AVRYFMKE-V---DHVVVGADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred ehh---------HHHHHHHh-C---CEEEECccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 643 12223322 1 22333333333 6 455555 35554 4888888876
No 395
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=37.31 E-value=1.3e+02 Score=25.10 Aligned_cols=64 Identities=16% Similarity=0.229 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCCCCCCCeEEEe-CCHHHHHHHHHhhCCCCCCCeEEEcCCcC-HHHHHHHHHcCCcEEEEEeC
Q 035915 160 QARNKVLKHCGLPDDEYLVLFT-PNYRDAMMLVGESYPFFRGNFYMTIIGEE-LDYVREFASFKESKVILAPE 230 (344)
Q Consensus 160 ~AR~~IA~~Lga~p~ey~VVFT-snaTeAlnlva~sl~~~~Gd~ivS~~eH~-~~~ir~la~~~G~kV~~vp~ 230 (344)
+.=+.|++-+|.+. +-|. +|--|+-..+++-.||+ .++-..+++ ..-++.||+++|+.|...|.
T Consensus 23 ~~v~~i~~~~gI~d----iN~IKPGIgEaTRvLLRRvP~~---vLVr~~~~pd~~Hl~~LA~ekgVpVe~~~d 88 (100)
T PF15608_consen 23 AEVERIAERYGISD----INLIKPGIGEATRVLLRRVPWK---VLVRDPDDPDLAHLLLLAEEKGVPVEVYPD 88 (100)
T ss_pred HHHHHHHHHhCCCC----cccccCChhHHHHHHHhcCCCE---EEECCCCCccHHHHHHHHHHcCCcEEEeCC
Confidence 34456788889862 4555 89999999999988872 344444444 44578899999999988764
No 396
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=37.26 E-value=1.8e+02 Score=26.42 Aligned_cols=89 Identities=10% Similarity=0.051 Sum_probs=55.7
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccH-HHHHHHHhC----CcEEE
Q 035915 211 LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSM-HWISEAHRN----SWHVL 285 (344)
Q Consensus 211 ~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl-~~Ia~ar~~----g~~vl 285 (344)
.+.+..+.+..|++|+++..+ +..+++.+.+... +..+|+++..++.....+ +.+..+++. ++.++
T Consensus 99 ~~~v~~~l~~~G~~vi~lG~~-----~p~~~l~~~~~~~----~~d~v~lS~~~~~~~~~~~~~i~~lr~~~~~~~~~i~ 169 (201)
T cd02070 99 KNLVATMLEANGFEVIDLGRD-----VPPEEFVEAVKEH----KPDILGLSALMTTTMGGMKEVIEALKEAGLRDKVKVM 169 (201)
T ss_pred HHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEeccccccHHHHHHHHHHHHHCCCCcCCeEE
Confidence 455666777889999876543 4567777777642 467888886555444555 455666553 56777
Q ss_pred ecccccCcCCccCCC-CCCCCcEEEEccc
Q 035915 286 LDATALVVGEDRLNL-ALHRPDFVLCNLD 313 (344)
Q Consensus 286 vDAaQa~~G~~~LDL-s~l~~DFvv~S~H 313 (344)
+=+...- . ++ ...++|+++-++.
T Consensus 170 vGG~~~~-~----~~~~~~GaD~~~~da~ 193 (201)
T cd02070 170 VGGAPVN-Q----EFADEIGADGYAEDAA 193 (201)
T ss_pred EECCcCC-H----HHHHHcCCcEEECCHH
Confidence 7554322 1 22 3578898876543
No 397
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=31.32 E-value=1.2e+02 Score=31.33 Aligned_cols=75 Identities=13% Similarity=0.194 Sum_probs=43.8
Q ss_pred HHHHHHHhhhcC-CC-CCeeEEEEeCcc----c-cccccHHHHHH-HHhCCcEEEecccccCcC-------CccCCCCCC
Q 035915 239 GSQLSQYFRRKC-KH-TPKGLFSYPADI----N-GTRYSMHWISE-AHRNSWHVLLDATALVVG-------EDRLNLALH 303 (344)
Q Consensus 239 ~~~L~~~l~~~~-~~-~~t~LVa~~avS----N-G~i~Pl~~Ia~-ar~~g~~vlvDAaQa~~G-------~~~LDLs~l 303 (344)
.+++++++..-. +. .-..+++=+.+| | +.-.=...+.. ++++|+.++||-+|.-.| |.-.+|+ .
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~-~ 333 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLD-S 333 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCC-C
Confidence 445566654211 11 123566667777 2 33222245543 488999999999998512 3334554 3
Q ss_pred CCcEEEEccccC
Q 035915 304 RPDFVLCNLDNT 315 (344)
Q Consensus 304 ~~DFvv~S~HK~ 315 (344)
.+|.++|| -|+
T Consensus 334 PpD~vTFS-KK~ 344 (484)
T KOG1405|consen 334 PPDVVTFS-KKF 344 (484)
T ss_pred Cccceehh-hhh
Confidence 79999998 354
No 398
>cd02072 Glm_B12_BD B12 binding domain of glutamate mutase (Glm). Glutamate mutase catalysis the conversion of (S)-glutamate with (2S,3S)-3-methylaspartate. The rearrangement reaction is initiated by the extraction of a hydrogen from the protein-bound substrate by a 5'-desoxyadenosyl radical, which is generated by the homolytic cleavage of the organometallic bond of the cofactor B12. Glm is a heterotetrameric molecule consisting of two alpha and two epsilon polypeptide chains.
Probab=29.44 E-value=3.5e+02 Score=23.39 Aligned_cols=90 Identities=6% Similarity=-0.058 Sum_probs=52.7
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccHHH-HHHHHhC---CcEEEe
Q 035915 211 LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSMHW-ISEAHRN---SWHVLL 286 (344)
Q Consensus 211 ~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl~~-Ia~ar~~---g~~vlv 286 (344)
.|.+..+.+..|++|+.+..+ ...+++.+...+. +..++.++..++.+...+.. +.++++. ++.+++
T Consensus 16 kniv~~~L~~~GfeVidLG~~-----v~~e~~v~aa~~~----~adiVglS~L~t~~~~~~~~~~~~l~~~gl~~v~viv 86 (128)
T cd02072 16 NKILDHAFTEAGFNVVNLGVL-----SPQEEFIDAAIET----DADAILVSSLYGHGEIDCKGLREKCDEAGLKDILLYV 86 (128)
T ss_pred HHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEeccccCCHHHHHHHHHHHHHCCCCCCeEEE
Confidence 455666667789999987654 3456665555432 45688888665444444443 3455554 466777
Q ss_pred cccccCcCCccC-C----CCCCCCcEEEE
Q 035915 287 DATALVVGEDRL-N----LALHRPDFVLC 310 (344)
Q Consensus 287 DAaQa~~G~~~L-D----Ls~l~~DFvv~ 310 (344)
=++-.+ +.... + |.++++|-+.-
T Consensus 87 GG~~~i-~~~d~~~~~~~L~~~Gv~~vf~ 114 (128)
T cd02072 87 GGNLVV-GKQDFEDVEKRFKEMGFDRVFA 114 (128)
T ss_pred ECCCCC-ChhhhHHHHHHHHHcCCCEEEC
Confidence 666554 33332 1 55667776543
No 399
>cd00472 Ribosomal_L24e_L24 Ribosomal protein L24e/L24 is a ribosomal protein found in eukaryotes (L24) and in archaea (L24e, distinct from archaeal L24). L24e/L24 is located on the surface of the large subunit, adjacent to proteins L14 and L3, and near the translation factor binding site. L24e/L24 appears to play a role in the kinetics of peptide synthesis, and may be involved in interactions between the large and small subunits, either directly or through other factors. In mouse, a deletion mutation in L24 has been identified as the cause for the belly spot and tail (Bst) mutation that results in disrupted pigmentation, somitogenesis and retinal cell fate determination. L24 may be an important protein in eukaryotic reproduction: in shrimp, L24 expression is elevated in the ovary, suggesting a role in oogenesis, and in Arabidopsis, L24 has been proposed to have a specific function in gynoecium development. No protein with sequence or structural homology to L24e/L24 has been identifi
Probab=29.21 E-value=29 Score=25.74 Aligned_cols=22 Identities=9% Similarity=-0.053 Sum_probs=17.3
Q ss_pred EEEEccccCCCCCCCceEEEEEeCCC
Q 035915 307 FVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 307 Fvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
-=.||++|+ + | |-|.+|||.+-
T Consensus 5 ~C~f~g~~I-~--P-G~G~~~Vr~Dg 26 (54)
T cd00472 5 KCSFCGYKI-Y--P-GHGKMYVRNDG 26 (54)
T ss_pred EecCcCCee-c--C-CCccEEEecCC
Confidence 346899998 2 5 99999999864
No 400
>PF01246 Ribosomal_L24e: Ribosomal protein L24e; InterPro: IPR000988 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. A number of eukaryotic and archaeabacterial ribosomal proteins can be grouped on the basis of sequence similarities. One of these families [] consists of mammalian ribosomal protein L24; yeast ribosomal protein L30A/B (Rp29) (YL21); Kluyveromyces lactis ribosomal protein L30; Arabidopsis thaliana ribosomal protein L24 homolog; Haloarcula marismortui ribosomal protein HL21/HL22; and Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ1201. These proteins have 60 to 160 amino-acid residues. This entry represents proteins related to the L24e ribosomal proteins.; PDB: 2ZKR_u 1VQ9_U 1VQL_U 1KD1_V 1VQP_U 3CCM_U 3CD6_U 3CCL_U 3CCR_U 1Q86_V ....
Probab=28.65 E-value=24 Score=27.66 Aligned_cols=21 Identities=5% Similarity=-0.102 Sum_probs=14.2
Q ss_pred EEEccccCCCCCCCceEEEEEeCCC
Q 035915 308 VLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 308 vv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
=.||++++ +.|-|.+||+++-
T Consensus 6 C~Fsg~~I----~PG~G~~~Vr~DG 26 (71)
T PF01246_consen 6 CSFSGYKI----YPGHGKMYVRNDG 26 (71)
T ss_dssp -TTT-SEE-----SSSSEEEE-TTS
T ss_pred ecccCCcc----CCCCCeEEEecCC
Confidence 35799998 4499999999764
No 401
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=27.29 E-value=47 Score=30.60 Aligned_cols=25 Identities=28% Similarity=0.481 Sum_probs=21.9
Q ss_pred cccccH-HHHHHHHhCCcEEEecccc
Q 035915 266 GTRYSM-HWISEAHRNSWHVLLDATA 290 (344)
Q Consensus 266 G~i~Pl-~~Ia~ar~~g~~vlvDAaQ 290 (344)
|+.-.+ +.|++||++|+.|++|.+-
T Consensus 49 Gt~~d~~~Lv~~~h~~gi~VilD~V~ 74 (316)
T PF00128_consen 49 GTMEDFKELVDAAHKRGIKVILDVVP 74 (316)
T ss_dssp BHHHHHHHHHHHHHHTTCEEEEEEET
T ss_pred chhhhhhhhhhccccccceEEEeeec
Confidence 999999 5667899999999999874
No 402
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=26.50 E-value=3.4e+02 Score=24.65 Aligned_cols=89 Identities=11% Similarity=0.047 Sum_probs=54.7
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccH-HHHHHHHhC----CcEEE
Q 035915 211 LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSM-HWISEAHRN----SWHVL 285 (344)
Q Consensus 211 ~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl-~~Ia~ar~~----g~~vl 285 (344)
.+.+..+.+..|++|+++-.+ +..+++.+.+... +..+|+++...+-....+ +.+.++++. ++.++
T Consensus 101 ~~~v~~~l~~~G~~vi~LG~~-----vp~e~~v~~~~~~----~pd~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~ 171 (197)
T TIGR02370 101 KNIVVTMLRANGFDVIDLGRD-----VPIDTVVEKVKKE----KPLMLTGSALMTTTMYGQKDINDKLKEEGYRDSVKFM 171 (197)
T ss_pred HHHHHHHHHhCCcEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEccccccCHHHHHHHHHHHHHcCCCCCCEEE
Confidence 445566677889999986433 4567777777642 467888886544333334 455666654 36777
Q ss_pred ecccccCcCCccCCC-CCCCCcEEEEccc
Q 035915 286 LDATALVVGEDRLNL-ALHRPDFVLCNLD 313 (344)
Q Consensus 286 vDAaQa~~G~~~LDL-s~l~~DFvv~S~H 313 (344)
+=+.. + . + ++ ...++|+++-+..
T Consensus 172 vGG~~-~-~--~-~~~~~~gad~~~~da~ 195 (197)
T TIGR02370 172 VGGAP-V-T--Q-DWADKIGADVYGENAS 195 (197)
T ss_pred EEChh-c-C--H-HHHHHhCCcEEeCChh
Confidence 75533 3 1 1 23 3578998876654
No 403
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=26.36 E-value=6.2e+02 Score=24.70 Aligned_cols=115 Identities=11% Similarity=0.049 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHcCC--CCCCCeEEEeCC-HHHHHHHHHhhCCCCCCCeEEEcCCcC----HHHHHHHHHcCCcEEEEE
Q 035915 156 IPEIQARNKVLKHCGL--PDDEYLVLFTPN-YRDAMMLVGESYPFFRGNFYMTIIGEE----LDYVREFASFKESKVILA 228 (344)
Q Consensus 156 ~~le~AR~~IA~~Lga--~p~ey~VVFTsn-aTeAlnlva~sl~~~~Gd~ivS~~eH~----~~~ir~la~~~G~kV~~v 228 (344)
+...+++++|+++--- .+. ++|+|-+ +..++..+.....-.+..+++..-..+ ....++|. +.|+.+..+
T Consensus 90 ~~~~~~~~~I~~~a~~~I~~g--~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~la~eL~-~~GI~vtlI 166 (275)
T PRK08335 90 RLMEEAKREIGNIGSELIDDG--DVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLALANELE-FLGIEFEVI 166 (275)
T ss_pred HHHHHHHHHHHHHHHHHcCCC--CEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHHHHHHH-HCCCCEEEE
Confidence 3456777777544311 223 4888854 444555554443211222333222223 22334444 459998887
Q ss_pred eCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-cc-ccccH--HHHHH-HHhCCcEEEe
Q 035915 229 PEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-NG-TRYSM--HWISE-AHRNSWHVLL 286 (344)
Q Consensus 229 p~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-NG-~i~Pl--~~Ia~-ar~~g~~vlv 286 (344)
+... +...+.+ . ..-++....+. || +...+ -.++. ||.+|++|+|
T Consensus 167 ~Dsa---------~~~~m~~-v---d~VivGAD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 167 TDAQ---------LGLFAKE-A---TLALVGADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred eccH---------HHHHHHh-C---CEEEECccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 7432 1122222 1 23344333333 64 55555 24444 5889999998
No 404
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=26.29 E-value=6.6e+02 Score=25.00 Aligned_cols=117 Identities=14% Similarity=0.093 Sum_probs=59.3
Q ss_pred hhhHHHHHHHHHHHHHcCCC-CCCCeEEEeCCHHHHHHHHHh-hCCCCCCC--eEEEcCCcC----HHHHHHHHHcCCcE
Q 035915 153 FISIPEIQARNKVLKHCGLP-DDEYLVLFTPNYRDAMMLVGE-SYPFFRGN--FYMTIIGEE----LDYVREFASFKESK 224 (344)
Q Consensus 153 ~as~~le~AR~~IA~~Lga~-p~ey~VVFTsnaTeAlnlva~-sl~~~~Gd--~ivS~~eH~----~~~ir~la~~~G~k 224 (344)
.....++.|++.++.. |++ -.+-++|.|.+.+.++.-++. +.. .|. .++..-..+ ....+.|. +.|+.
T Consensus 97 ~~i~~~~~a~~~ia~~-~a~~i~dg~~IlTh~~S~~v~~~l~~A~~--~~k~~~V~VtESRP~~eG~~~ak~L~-~~gI~ 172 (301)
T COG1184 97 EFIDRVEKAKERIAEI-GAERIHDGDVILTHSFSKTVLEVLKTAAD--RGKRFKVIVTESRPRGEGRIMAKELR-QSGIP 172 (301)
T ss_pred HHHHHHHHHHHHHHHH-HHhhccCCCEEEEecCcHHHHHHHHHhhh--cCCceEEEEEcCCCcchHHHHHHHHH-HcCCc
Confidence 3444567888887765 332 123369999777766555444 333 333 322121233 33445554 46888
Q ss_pred EEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCc-cccccccH---HHHHH-HHhCCcEEEe
Q 035915 225 VILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPAD-INGTRYSM---HWISE-AHRNSWHVLL 286 (344)
Q Consensus 225 V~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~av-SNG~i~Pl---~~Ia~-ar~~g~~vlv 286 (344)
+..++-. .....+++ . ..-+|.-.++ .||.+..- -.++. ||+.+.+|++
T Consensus 173 ~~~I~Ds---------a~~~~~~~-v---d~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 173 VTVIVDS---------AVGAFMSR-V---DKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred eEEEech---------HHHHHHHh-C---CEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 8776622 22223332 1 2233333333 26554433 24444 4888888876
No 405
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=26.28 E-value=81 Score=35.37 Aligned_cols=75 Identities=15% Similarity=0.133 Sum_probs=47.7
Q ss_pred EEEEeC-cc-ccccccH-H---HHH-HHHhCCcEEEecccccCcCCcc----CCCCCCCCcEEEEccccCCCCC--CCce
Q 035915 257 LFSYPA-DI-NGTRYSM-H---WIS-EAHRNSWHVLLDATALVVGEDR----LNLALHRPDFVLCNLDNTQNAQ--PSKI 323 (344)
Q Consensus 257 LVa~~a-vS-NG~i~Pl-~---~Ia-~ar~~g~~vlvDAaQa~~G~~~----LDLs~l~~DFvv~S~HK~l~G~--P~Gi 323 (344)
+|.=|. +. +|.+.|- . .+. .|+++|+++++|=+|.=.|..- .+.-...||++|++ |.|=|| | +
T Consensus 588 vI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~g--KgLtgG~~P--l 663 (817)
T PLN02974 588 LIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYA--KLLTGGLVP--L 663 (817)
T ss_pred EEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEeec--ccccCCCCc--c
Confidence 444453 33 3887653 3 333 3588999999999998214322 11223569999986 763333 5 8
Q ss_pred EEEEEeCCCccc
Q 035915 324 TCLLIRKKSFDT 335 (344)
Q Consensus 324 G~L~Vr~~~~~~ 335 (344)
|++++++++++.
T Consensus 664 aa~l~~~~I~~~ 675 (817)
T PLN02974 664 AATLATEEVFEA 675 (817)
T ss_pred EEEEEcHHHHHh
Confidence 999999887654
No 406
>PRK08297 L-lysine aminotransferase; Provisional
Probab=26.17 E-value=1.3e+02 Score=30.80 Aligned_cols=82 Identities=16% Similarity=0.214 Sum_probs=46.5
Q ss_pred HHHHHHhhhcCCCCCeeEEEE-eCccc-cccccH-HHHH----HHHhCCcEEEeccccc-CcCCccC----CCCCCCCcE
Q 035915 240 SQLSQYFRRKCKHTPKGLFSY-PADIN-GTRYSM-HWIS----EAHRNSWHVLLDATAL-VVGEDRL----NLALHRPDF 307 (344)
Q Consensus 240 ~~L~~~l~~~~~~~~t~LVa~-~avSN-G~i~Pl-~~Ia----~ar~~g~~vlvDAaQa-~~G~~~L----DLs~l~~DF 307 (344)
+++++.+... ......|.+ +.+.+ |.+.|- +.+. .|+++|+++++|=+|. + |..-- +.-...||+
T Consensus 213 ~~~~~~i~~~--~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGf-GRtG~~~a~~~~gv~PDi 289 (443)
T PRK08297 213 AQARAAFERH--PHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGV-GLTGTAWAYQQLGVRPDI 289 (443)
T ss_pred HHHHHHHHhC--CCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcc-CccchHHHHHhcCCCCCE
Confidence 3445556431 123444444 45555 776433 4443 3588999999999996 5 65421 111347999
Q ss_pred EEEccccCCCCCCCceEEEEEeCC
Q 035915 308 VLCNLDNTQNAQPSKITCLLIRKK 331 (344)
Q Consensus 308 vv~S~HK~l~G~P~GiG~L~Vr~~ 331 (344)
+++ =|. + | +|+.+++++
T Consensus 290 v~~--gK~-l--~--~~a~l~~~~ 306 (443)
T PRK08297 290 VAF--GKK-T--Q--VCGIMAGRR 306 (443)
T ss_pred EEe--ccc-c--c--ccceecchH
Confidence 986 575 4 3 444555543
No 407
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=24.75 E-value=4.4e+02 Score=24.88 Aligned_cols=116 Identities=19% Similarity=0.131 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHhhCCCCCCCe--EEEcCCcC----HHHHHHHHHcCCcEEEEEeC
Q 035915 157 PEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGESYPFFRGNF--YMTIIGEE----LDYVREFASFKESKVILAPE 230 (344)
Q Consensus 157 ~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~sl~~~~Gd~--ivS~~eH~----~~~ir~la~~~G~kV~~vp~ 230 (344)
.+++++++|+++.----.+.++|.|-|.+..+..++... ++.|.. ++..-..+ ....+.|++ .|+.|.+++.
T Consensus 89 e~~~~~~~I~~~~~~~I~~~~~ILT~~~S~~v~~~l~~a-~~~~~~~~V~v~es~P~~eG~~~a~~L~~-~gi~v~~i~d 166 (282)
T PF01008_consen 89 EIEQAREKIADHASELINDGDTILTHGYSSTVERFLLSA-KKKGKKFRVIVLESRPYNEGRLMAKELAE-AGIPVTLIPD 166 (282)
T ss_dssp HHHHHHHHHHHHHHCCC-TTEEEEEES--SHHHHHHHHH-HHTTEEEEEEEE--TTTTHHHTHHHHHHH-TT-EEEEE-G
T ss_pred HHHHHHHHHHHHHHHhccCCeEEEEeCCchHHHHHHHHH-HHcCCeEEEEEccCCcchhhhhHHHHhhh-cceeEEEEec
Confidence 367777777765431112237999977777655544432 233433 32221222 223455544 6999998874
Q ss_pred CCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCcc-cc-ccccH--HHHHH-HHhCCcEEEe
Q 035915 231 AWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADI-NG-TRYSM--HWISE-AHRNSWHVLL 286 (344)
Q Consensus 231 ~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avS-NG-~i~Pl--~~Ia~-ar~~g~~vlv 286 (344)
.. +...+..++ ..-|+...++. || .+..+ ..++. ||+++++|+|
T Consensus 167 ~~---------~~~~m~~~v---d~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v 215 (282)
T PF01008_consen 167 SA---------VGYVMPRDV---DKVLIGADAVLANGGVVNKVGTLQLALAAKEFNVPVYV 215 (282)
T ss_dssp GG---------HHHHHHCTE---SEEEEE-SEEETTS-EEEETTHHHHHHHHHHTT-EEEE
T ss_pred hH---------HHHHHHHhC---CeeEEeeeEEecCCCEeehhhHHHHHHHHHhhCCCEEE
Confidence 31 222232201 12344444333 65 55555 35554 5888888777
No 408
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=23.42 E-value=2.6e+02 Score=29.12 Aligned_cols=68 Identities=10% Similarity=0.017 Sum_probs=42.7
Q ss_pred ccccccHH----HHH-HHHhCCcEEEecccccCcCCcc--CCCCC--CCCcEEEEccccCCCCCCCceEEEEEeCCCccc
Q 035915 265 NGTRYSMH----WIS-EAHRNSWHVLLDATALVVGEDR--LNLAL--HRPDFVLCNLDNTQNAQPSKITCLLIRKKSFDT 335 (344)
Q Consensus 265 NG~i~Pl~----~Ia-~ar~~g~~vlvDAaQa~~G~~~--LDLs~--l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~~~~ 335 (344)
+|++++.. ... .++++|.+++.|=+|.-.|..- .-++. .-||.++. -|. +|.-.-+|+.+..++..+.
T Consensus 225 gG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIvTm--AKg-iGnG~Pl~AVvtt~EIa~v 301 (442)
T KOG1404|consen 225 GGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIVTM--AKG-IGNGFPLGAVVTTPEIADV 301 (442)
T ss_pred CccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHHHH--Hhh-ccCCCcceeeecCHHHHHH
Confidence 38887763 332 3588999999999998434322 12222 33676654 466 5543458999888776554
No 409
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=23.42 E-value=2.2e+02 Score=29.20 Aligned_cols=162 Identities=14% Similarity=0.062 Sum_probs=86.8
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHHh-----hCCCC--CCCe--EEEcCC--cC-----------HH
Q 035915 155 SIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVGE-----SYPFF--RGNF--YMTIIG--EE-----------LD 212 (344)
Q Consensus 155 s~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva~-----sl~~~--~Gd~--ivS~~e--H~-----------~~ 212 (344)
...+.+--+.+..+||-+ .|.=+..+.||...+.. ++..+ +.++ |++..+ |. -+
T Consensus 100 nd~~~~f~~~vt~lf~~~----kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~d 175 (427)
T KOG1402|consen 100 NDVLGEFAEYVTKLFGYD----KVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPD 175 (427)
T ss_pred hhhHHHHHHHHHHhcCcc----eeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcc
Confidence 344556667789999874 36666666776554332 33222 2232 343333 11 01
Q ss_pred HHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccc--cccccH----HHHH-HHHhCCcEEE
Q 035915 213 YVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADIN--GTRYSM----HWIS-EAHRNSWHVL 285 (344)
Q Consensus 213 ~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSN--G~i~Pl----~~Ia-~ar~~g~~vl 285 (344)
.|+.+....-..+..+|.+ +.++|+.+|..+ ...-|.+--... |++.|- ..+. .|.+++++++
T Consensus 176 s~~~fgp~~P~~~~~v~Y~------d~eale~~l~~~----~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I 245 (427)
T KOG1402|consen 176 SWDGFGPFLPGVVDKVPYG------DAEALEVALKSP----NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLI 245 (427)
T ss_pred hhhccCCCCCCcceeeccC------CHHHHHHHhcCC----CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEE
Confidence 2322211111124445543 457788888642 333333332333 998885 3343 3578999999
Q ss_pred ecccccCcCCc----cCCCCCCCCcEEEEccccCCCCCCCceEEEEEeCCC
Q 035915 286 LDATALVVGED----RLNLALHRPDFVLCNLDNTQNAQPSKITCLLIRKKS 332 (344)
Q Consensus 286 vDAaQa~~G~~----~LDLs~l~~DFvv~S~HK~l~G~P~GiG~L~Vr~~~ 332 (344)
+|=+|.-+|.. -.|-+...||.+.+. |.|-||=--+.+.+..+++
T Consensus 246 ~DEvQTGl~RTGk~la~d~env~PDivilg--KalSGG~~Pvsavl~~~~i 294 (427)
T KOG1402|consen 246 ADEVQTGLARTGKLLACDYENVRPDIVILG--KALSGGVYPVSAVLADDDI 294 (427)
T ss_pred ehhhhhcccccCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEEecHHH
Confidence 99999854322 356677889998863 6523321125555555543
No 410
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=23.23 E-value=3.3e+02 Score=28.33 Aligned_cols=89 Identities=13% Similarity=0.019 Sum_probs=52.6
Q ss_pred HHHHHHHcCC-cEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccH-HHHHHHHhC--CcEEEecc
Q 035915 213 YVREFASFKE-SKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSM-HWISEAHRN--SWHVLLDA 288 (344)
Q Consensus 213 ~ir~la~~~G-~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl-~~Ia~ar~~--g~~vlvDA 288 (344)
.+....+..| .+|..++... ..++.+++.+.+... +..+|+++.. +...... +.+..+|+. ++.+++=|
T Consensus 27 ~lAa~L~~~G~~~V~iiD~~~--~~~~~~~~~~~l~~~----~pdvVgis~~-t~~~~~a~~~~~~~k~~~P~~~iV~GG 99 (497)
T TIGR02026 27 YIGGALLDAGYHDVTFLDAMT--GPLTDEKLVERLRAH----CPDLVLITAI-TPAIYIACETLKFARERLPNAIIVLGG 99 (497)
T ss_pred HHHHHHHhcCCcceEEecccc--cCCCHHHHHHHHHhc----CcCEEEEecC-cccHHHHHHHHHHHHHHCCCCEEEEcC
Confidence 3343345678 6888887653 346777787777642 3568888754 3333333 333445654 99999988
Q ss_pred cccCcCCccCC-CCC-CCCcEEEE
Q 035915 289 TALVVGEDRLN-LAL-HRPDFVLC 310 (344)
Q Consensus 289 aQa~~G~~~LD-Ls~-l~~DFvv~ 310 (344)
.|+- -. +-+ |.. -.+|+++.
T Consensus 100 ~h~t-~~-~~~~l~~~p~vD~Vv~ 121 (497)
T TIGR02026 100 IHPT-FM-FHQVLTEAPWIDFIVR 121 (497)
T ss_pred CCcC-cC-HHHHHhcCCCccEEEe
Confidence 8764 22 211 222 25898875
No 411
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=22.59 E-value=64 Score=33.39 Aligned_cols=24 Identities=29% Similarity=0.410 Sum_probs=21.6
Q ss_pred cccccH-HHHHHHHhCCcEEEeccc
Q 035915 266 GTRYSM-HWISEAHRNSWHVLLDAT 289 (344)
Q Consensus 266 G~i~Pl-~~Ia~ar~~g~~vlvDAa 289 (344)
|+..++ +.|.+||++|+.|++|++
T Consensus 78 Gt~~dl~~Li~~~H~~Gi~vi~D~V 102 (479)
T PRK09441 78 GTKEELLNAIDALHENGIKVYADVV 102 (479)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEC
Confidence 999999 466789999999999986
No 412
>PF10937 DUF2638: Protein of unknown function (DUF2638); InterPro: IPR020373 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry represents a component of the mitochondrial small ribosomal subunit. Mature mitochondrial ribosomes consist of a small (37S) and a large (54S) subunit. The 37S subunit contains at least 33 different proteins and 1 molecule of RNA (15S). The 54S subunit contains at least 45 different proteins and 1 molecule of RNA (21S). This entry is represented by a mitochondrial ribosomal protein of the small subunit, which has similarity to human mitochondrial ribosomal protein MRP-S36 [, , ].
Probab=22.26 E-value=40 Score=28.62 Aligned_cols=20 Identities=25% Similarity=0.418 Sum_probs=16.2
Q ss_pred cccccc-ccCCCCCchhhHHH
Q 035915 48 HGLDLR-WSGPITPTEMQYVE 67 (344)
Q Consensus 48 ~~~~~~-~~~~~~~~~~~yv~ 67 (344)
..|=.| |..||++.||+||+
T Consensus 88 ~eLP~Rfrr~p~se~EiE~In 108 (112)
T PF10937_consen 88 SELPARFRRKPISEEEIEAIN 108 (112)
T ss_pred HHcCHhHccCCCCHHHHHHHH
Confidence 345566 68999999999997
No 413
>COG2871 NqrF Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF [Energy production and conversion]
Probab=22.17 E-value=46 Score=33.25 Aligned_cols=29 Identities=28% Similarity=0.551 Sum_probs=25.2
Q ss_pred ccCCCCCchhhHHHHH--HHHhcCcccCccc
Q 035915 54 WSGPITPTEMQYVEQY--VLAKYPQYAGLVE 82 (344)
Q Consensus 54 ~~~~~~~~~~~yv~~~--~~~~~~~~~~~~~ 82 (344)
|+|...-.||=|+|+| +.|++|+|-=+..
T Consensus 310 WYGARS~rE~fY~Ed~d~L~ae~pNF~wH~a 340 (410)
T COG2871 310 WYGARSLREMFYQEDFDQLQAENPNFHWHLA 340 (410)
T ss_pred eeccchHHHhHHHHHHHHHHhhCCCcEEEEE
Confidence 9999999999999998 6799999884444
No 414
>smart00642 Aamy Alpha-amylase domain.
Probab=21.15 E-value=81 Score=28.02 Aligned_cols=25 Identities=28% Similarity=0.423 Sum_probs=21.2
Q ss_pred cccccH-HHHHHHHhCCcEEEecccc
Q 035915 266 GTRYSM-HWISEAHRNSWHVLLDATA 290 (344)
Q Consensus 266 G~i~Pl-~~Ia~ar~~g~~vlvDAaQ 290 (344)
|+.-.+ +.|.+||++|+.|++|.+=
T Consensus 67 Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 67 GTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 998888 4667889999999999863
No 415
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=20.67 E-value=4.9e+02 Score=21.49 Aligned_cols=70 Identities=7% Similarity=-0.075 Sum_probs=40.0
Q ss_pred HHHHHHHHHcCCcEEEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeCccccccccH-HHHHHHHhC---CcEEEe
Q 035915 211 LDYVREFASFKESKVILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPADINGTRYSM-HWISEAHRN---SWHVLL 286 (344)
Q Consensus 211 ~~~ir~la~~~G~kV~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~avSNG~i~Pl-~~Ia~ar~~---g~~vlv 286 (344)
.+.+..+.+..|++|+++..+ +..+++.+..... +..+|+++...+-....+ +++.++++. ++.+++
T Consensus 16 ~~~~~~~l~~~G~~vi~lG~~-----vp~e~~~~~a~~~----~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~~ 86 (122)
T cd02071 16 AKVIARALRDAGFEVIYTGLR-----QTPEEIVEAAIQE----DVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVVG 86 (122)
T ss_pred HHHHHHHHHHCCCEEEECCCC-----CCHHHHHHHHHHc----CCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEEE
Confidence 445566677889999987543 3455665555432 356777775543333334 344555554 566666
Q ss_pred ccc
Q 035915 287 DAT 289 (344)
Q Consensus 287 DAa 289 (344)
=++
T Consensus 87 GG~ 89 (122)
T cd02071 87 GGI 89 (122)
T ss_pred ECC
Confidence 443
No 416
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=20.40 E-value=7.1e+02 Score=26.70 Aligned_cols=124 Identities=15% Similarity=0.033 Sum_probs=68.4
Q ss_pred hhhhhhHHHHHHHHHHHHHcCCCCCCCeEEEeCCHHHHHHHHH-hhCCCCCCCeEE-EcCC---cCHHHHHHHHHcCCcE
Q 035915 150 PGSFISIPEIQARNKVLKHCGLPDDEYLVLFTPNYRDAMMLVG-ESYPFFRGNFYM-TIIG---EELDYVREFASFKESK 224 (344)
Q Consensus 150 ~g~~as~~le~AR~~IA~~Lga~p~ey~VVFTsnaTeAlnlva-~sl~~~~Gd~iv-S~~e---H~~~~ir~la~~~G~k 224 (344)
-++++.+.+.-|-+.|-++.=-.-.+.+|+.|-+.+-.+|.|+ ++....+...++ .+.- .....++.|- ..|+.
T Consensus 334 I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~lr~Lv-~~Gin 412 (556)
T KOG1467|consen 334 IDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLLRRLV-DRGIN 412 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHHHHHH-HcCCC
Confidence 4666666677777777777654434557999988888887664 444333444432 1111 1123455553 35888
Q ss_pred EEEEeCCCCCCccCHHHHHHHhhhcCCCCCeeEEEEeC--ccccccccH---HHHHH-HHhCCcEEEecc
Q 035915 225 VILAPEAWLDLRIKGSQLSQYFRRKCKHTPKGLFSYPA--DINGTRYSM---HWISE-AHRNSWHVLLDA 288 (344)
Q Consensus 225 V~~vp~~~~~g~i~~~~L~~~l~~~~~~~~t~LVa~~a--vSNG~i~Pl---~~Ia~-ar~~g~~vlvDA 288 (344)
+.|+-.+.. + .+ +.. -+++|.=.+ -+||.++.= ..++. ++.++++|+|=|
T Consensus 413 ctYv~I~a~----s--yi---m~e-----vtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCC 468 (556)
T KOG1467|consen 413 CTYVLINAA----S--YI---MLE-----VTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCC 468 (556)
T ss_pred eEEEEehhH----H--HH---HHh-----cceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEe
Confidence 888655421 1 11 111 133333222 248887764 24444 367888887743
Done!