BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035917
(611 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 172/307 (56%), Gaps = 23/307 (7%)
Query: 311 LVKVKLADLMAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKL--GEKKFRN 368
L + L +L AS++F ++N++ G YK L DG+++AVKRL + GE +F+
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATE---LDWPTRFRI 425
E+ + H NL L G+C+ E+LL+Y YM++G++ S L+ LDWP R RI
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 144
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD 485
LG+ARGLA+LH C P +H+++ + IL+DE+F+A + DFGLAKLM D
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAV 203
Query: 486 LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-AGFKG------------NLVDWVNQL 532
G G+IAPEY ST +S K DV+G GV+LLEL G + L+DWV L
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 533 SSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGF 592
+ + +D L G DEE+ Q ++VA C S P +R M +V + L G
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG----DGL 319
Query: 593 SERYDEF 599
+ER++E+
Sbjct: 320 AERWEEW 326
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 117/307 (38%), Positives = 171/307 (55%), Gaps = 23/307 (7%)
Query: 311 LVKVKLADLMAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKL--GEKKFRN 368
L + L +L AS++F ++N++ G YK L DG ++AVKRL + GE +F+
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATE---LDWPTRFRI 425
E+ + H NL L G+C+ E+LL+Y YM++G++ S L+ LDWP R RI
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRI 136
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD 485
LG+ARGLA+LH C P +H+++ + IL+DE+F+A + DFGLAKLM D
Sbjct: 137 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAV 195
Query: 486 LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-AGFKG------------NLVDWVNQL 532
G G+IAPEY ST +S K DV+G GV+LLEL G + L+DWV L
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 533 SSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGF 592
+ + +D L G DEE+ Q ++VA C S P +R M +V + L G
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG----DGL 311
Query: 593 SERYDEF 599
+ER++E+
Sbjct: 312 AERWEEW 318
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/282 (34%), Positives = 143/282 (50%), Gaps = 18/282 (6%)
Query: 313 KVKLADLMAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLN-TCKLGEKKFRNEMN 371
+V L DL A+N+F + +I G YK +L DG+ +A+KR G ++F E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 372 RLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---ATELDWPTRFRIGLG 428
L RHP+L L+G+C E +LIYKYM +G L L G+ + W R I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 429 AARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGE 488
AARGL +LH +H+++ S IL+DE+F +I DFG++K T D++ G
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 489 FGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKG-----------NLVDWVNQLSSSGR 537
GYI PEY + K DVY GVVL E+ + NL +W + ++G+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 538 SKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQV 579
++ +D L K E + +F A C+ +DR SM V
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/282 (33%), Positives = 142/282 (50%), Gaps = 18/282 (6%)
Query: 313 KVKLADLMAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLN-TCKLGEKKFRNEMN 371
+V L DL A+N+F + +I G YK +L DG+ +A+KR G ++F E+
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 372 RLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---ATELDWPTRFRIGLG 428
L RHP+L L+G+C E +LIYKYM +G L L G+ + W R I +G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 429 AARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGE 488
AARGL +LH +H+++ S IL+DE+F +I DFG++K T ++ G
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 489 FGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKG-----------NLVDWVNQLSSSGR 537
GYI PEY + K DVY GVVL E+ + NL +W + ++G+
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 538 SKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQV 579
++ +D L K E + +F A C+ +DR SM V
Sbjct: 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 100/189 (52%), Gaps = 14/189 (7%)
Query: 338 GTTYKAMLPDGSVLAVKRLN-----TCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE 392
G YK + + +V AVK+L T + +++F E+ + + +H NL LLG+ +
Sbjct: 45 GVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD 103
Query: 393 EKLLIYKYMSSGTLY---SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI 449
+ L+Y YM +G+L S L G L W R +I GAA G+ +LH +H++I
Sbjct: 104 DLCLVYVYMPNGSLLDRLSCLDGTPP-LSWHMRCKIAQGAANGINFLHENHH---IHRDI 159
Query: 450 CSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVY 509
S IL+DE F A+I DFGLA+ ++ + +G Y+APE + K D+Y
Sbjct: 160 KSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEITP-KSDIY 218
Query: 510 GIGVVLLEL 518
GVVLLE+
Sbjct: 219 SFGVVLLEI 227
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 103/196 (52%), Gaps = 12/196 (6%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT ++A GS +AVK L ++ F E+ + +LRHPN+ +G
Sbjct: 51 GTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 395 LLIYKYMSSGTLYSLLQ--GNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
++ +Y+S G+LY LL G +LD R + A+G+ +LH+ PP +H+N+ S
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSP 168
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIG 512
+LVD+ + ++ DFGL++L S+ SS G ++APE ++ K DVY G
Sbjct: 169 NLLVDKKYTVKVCDFGLSRLKASTFLSS--KSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 513 VVLLELAGFK---GNL 525
V+L ELA + GNL
Sbjct: 227 VILWELATLQQPWGNL 242
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 99/189 (52%), Gaps = 14/189 (7%)
Query: 338 GTTYKAMLPDGSVLAVKRLN-----TCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE 392
G YK + + +V AVK+L T + +++F E+ + + +H NL LLG+ +
Sbjct: 45 GVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD 103
Query: 393 EKLLIYKYMSSGTLY---SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI 449
+ L+Y YM +G+L S L G L W R +I GAA G+ +LH +H++I
Sbjct: 104 DLCLVYVYMPNGSLLDRLSCLDGTPP-LSWHMRCKIAQGAANGINFLHENHH---IHRDI 159
Query: 450 CSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVY 509
S IL+DE F A+I DFGLA+ ++ +G Y+APE + K D+Y
Sbjct: 160 KSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEITP-KSDIY 218
Query: 510 GIGVVLLEL 518
GVVLLE+
Sbjct: 219 SFGVVLLEI 227
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 98/189 (51%), Gaps = 14/189 (7%)
Query: 338 GTTYKAMLPDGSVLAVKRLN-----TCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE 392
G YK + + +V AVK+L T + +++F E+ + + +H NL LLG+ +
Sbjct: 39 GVVYKGYVNNTTV-AVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD 97
Query: 393 EKLLIYKYMSSGTLY---SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI 449
+ L+Y YM +G+L S L G L W R +I GAA G+ +LH +H++I
Sbjct: 98 DLCLVYVYMPNGSLLDRLSCLDGTPP-LSWHMRCKIAQGAANGINFLHENHH---IHRDI 153
Query: 450 CSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVY 509
S IL+DE F A+I DFGLA+ + +G Y+APE + K D+Y
Sbjct: 154 KSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITP-KSDIY 212
Query: 510 GIGVVLLEL 518
GVVLLE+
Sbjct: 213 SFGVVLLEI 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 101/196 (51%), Gaps = 12/196 (6%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT ++A GS +AVK L ++ F E+ + +LRHPN+ +G
Sbjct: 51 GTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109
Query: 395 LLIYKYMSSGTLYSLLQ--GNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
++ +Y+S G+LY LL G +LD R + A+G+ +LH+ PP +H+++ S
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSP 168
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIG 512
+LVD+ + ++ DFGL++L S S E ++APE ++ K DVY G
Sbjct: 169 NLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPE--WMAPEVLRDEPSNEKSDVYSFG 226
Query: 513 VVLLELAGFK---GNL 525
V+L ELA + GNL
Sbjct: 227 VILWELATLQQPWGNL 242
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 14/189 (7%)
Query: 338 GTTYKAMLPDGSVLAVKRLN-----TCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE 392
G YK + + + +AVK+L T + +++F E+ + +H NL LLG+ +
Sbjct: 36 GVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGD 94
Query: 393 EKLLIYKYMSSGTLY---SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI 449
+ L+Y Y +G+L S L G L W R +I GAA G+ +LH +H++I
Sbjct: 95 DLCLVYVYXPNGSLLDRLSCLDGTPP-LSWHXRCKIAQGAANGINFLHENHH---IHRDI 150
Query: 450 CSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVY 509
S IL+DE F A+I DFGLA+ + + +G Y APE + K D+Y
Sbjct: 151 KSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEITP-KSDIY 209
Query: 510 GIGVVLLEL 518
GVVLLE+
Sbjct: 210 SFGVVLLEI 218
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 118/250 (47%), Gaps = 9/250 (3%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
+AVK L + ++F E + +++HPNL LLG C E +I ++M+ G L
Sbjct: 286 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ N E++ + + + +L + F+H+N+ + LV E+ ++ DFG
Sbjct: 346 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFG 402
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
L++LMT ++ + APE + S+K DV+ GV+L E+A + +
Sbjct: 403 LSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 461
Query: 529 VNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
++ LS E + +G E++ + ++ C P DR S +++Q+ ++
Sbjct: 462 ID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFETMFQ 517
Query: 589 QHGFSERYDE 598
+ S+ ++
Sbjct: 518 ESSISDEVEK 527
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 118/250 (47%), Gaps = 9/250 (3%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
+AVK L + ++F E + +++HPNL LLG C E +I ++M+ G L
Sbjct: 244 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ N E++ + + + +L + F+H+N+ + LV E+ ++ DFG
Sbjct: 304 LRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFG 360
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
L++LMT ++ + APE + S+K DV+ GV+L E+A + +
Sbjct: 361 LSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 419
Query: 529 VNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
++ LS E + +G E++ + ++ C P DR S +++Q+ ++
Sbjct: 420 ID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFETMFQ 475
Query: 589 QHGFSERYDE 598
+ S+ ++
Sbjct: 476 ESSISDEVEK 485
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
+AVK L + ++F E + +++HPNL LLG C E +I ++M+ G L
Sbjct: 247 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ N E+ + + + +L + F+H+N+ + LV E+ ++ DFG
Sbjct: 307 LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFG 363
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
L++LMT ++ + APE + S+K DV+ GV+L E+A + +
Sbjct: 364 LSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 422
Query: 529 VNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
++ LS E + +G E++ + ++ C P DR S +++Q+ ++
Sbjct: 423 ID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFETMFQ 478
Query: 589 QHGFSERYDE 598
+ S+ ++
Sbjct: 479 ESSISDEVEK 488
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 88 IIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 144
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 145 VGENHLVKVADFGLSRLMTGDTXTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 203
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 204 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 259
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 260 FAEIHQAFETMFQESSISDEVEK 282
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 148
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 207
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 208 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 263
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 264 FAEIHQAFETMFQESSISDEVEK 286
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 125/263 (47%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 145
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT D + G + APE + S+K DV+ GV+L
Sbjct: 146 VGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 204
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 205 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 260
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 261 FAEIHQAFETMFQESSISDEVEK 283
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 145
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 146 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 204
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 205 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 260
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 261 FAEIHQAFETMFQESSISDEVEK 283
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 125/263 (47%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 87
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 88 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 144
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT D + G + APE + S+K DV+ GV+L
Sbjct: 145 VGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLL 203
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 204 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 259
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 260 FAEIHQAFETMFQESSISDEVEK 282
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 88
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 89 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 145
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 146 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 204
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 205 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 260
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 261 FAEIHQAFETMFQESSISDEVEK 283
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 124/263 (47%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 40 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 99
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 100 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 156
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 157 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 215
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 216 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 271
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 272 FAEIHQAFETMFQESSISDEVEK 294
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 10/251 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 148
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTXTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 207
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 208 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 263
Query: 576 MYQVYQSLNSI 586
+++Q+ ++
Sbjct: 264 FAEIHQAFETM 274
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E+ + + + +L + F+H+++ + L
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 143
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 203 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 258
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 259 FAEIHQAFETMFQESSISDEVEK 281
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 117/250 (46%), Gaps = 9/250 (3%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
+AVK L + ++F E + +++HPNL LLG C E +I ++M+ G L
Sbjct: 45 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 104
Query: 410 L-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L + N E+ + + + +L + F+H+++ + LV E+ ++ DFG
Sbjct: 105 LRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFG 161
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
L++LMT ++ + APE + S+K DV+ GV+L E+A + +
Sbjct: 162 LSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 529 VNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
++ LS E + +G E++ + ++ C P DR S +++Q+ ++
Sbjct: 221 ID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPSFAEIHQAFETMFQ 276
Query: 589 QHGFSERYDE 598
+ S+ ++
Sbjct: 277 ESSISDEVEK 286
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E+ + + + +L + F+H+++ + L
Sbjct: 87 IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 143
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 203 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 258
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 259 FAEIHQAFETMFQESSISDEVEK 281
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E+ + + + +L + F+H+++ + L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 143
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 203 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 258
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 259 FAEIHQAFETMFQESSISDEVEK 281
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 10/251 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 92 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 148
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 207
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 208 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 263
Query: 576 MYQVYQSLNSI 586
+++Q+ ++
Sbjct: 264 FAEIHQAFETM 274
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 123/263 (46%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E+ + + + +L + F+H+++ + L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 143
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 203 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 258
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 259 FAEIHQAFETMFQESSISDEVEK 281
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 10/251 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 92 IIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 148
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 149 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 207
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 208 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 263
Query: 576 MYQVYQSLNSI 586
+++Q+ ++
Sbjct: 264 FAEIHQAFETM 274
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 10/251 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 91 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 147
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 148 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 206
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 207 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 262
Query: 576 MYQVYQSLNSI 586
+++Q+ ++
Sbjct: 263 FAEIHQAFETM 273
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 10/251 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 143
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 203 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 258
Query: 576 MYQVYQSLNSI 586
+++Q+ ++
Sbjct: 259 FAEIHQAFETM 269
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 10/251 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E++ + + + +L + F+H+++ + L
Sbjct: 87 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 143
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 144 VGENHLVKVADFGLSRLMTGDTYTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 202
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ LS E + +G E++ + ++ C P DR S
Sbjct: 203 WEIATYGMSPYPGID-LSQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 258
Query: 576 MYQVYQSLNSI 586
+++Q+ ++
Sbjct: 259 FAEIHQAFETM 269
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E+ + + + +L + F+H+++ + L
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 141
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 142 VGENHLVKVADFGLSRLMTGDTXTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 200
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ S E + +G E++ + ++ C P DR S
Sbjct: 201 WEIATYGMSPYPGIDP-SQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 256
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 257 FAEIHQAFETMFQESSISDEVEK 279
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 10/260 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E+ + + + +L + F+H+++ + L
Sbjct: 85 IIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 141
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 142 VGENHLVKVADFGLSRLMTGDTXTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 200
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ S E + +G E++ + ++ C P DR S
Sbjct: 201 WEIATYGMSPYPGIDP-SQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 256
Query: 576 MYQVYQSLNSIAAQHGFSER 595
+++Q+ ++ + S+
Sbjct: 257 FAEIHQAFETMFQESSISDE 276
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 5/173 (2%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
+AVK L + ++F E + +++HPNL LLG C +E ++ +YM G L
Sbjct: 59 TVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDY 118
Query: 410 L-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L + N E+ + + + +L + F+H+++ + LV E+ ++ DFG
Sbjct: 119 LRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFG 175
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
L++LMT ++ + APE + S+K DV+ GV+L E+A +
Sbjct: 176 LSRLMTGDTYTAHAGAKF-PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATY 227
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 121 SMQRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXXXXGPIPADLGNCTYLNTLILSNNK 180
SM LD+S N LSG IP +I + +PYL G IP ++G+ LN L LS+NK
Sbjct: 630 SMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 688
Query: 181 LSGPIPYQLSNLGRLKKFSVANNDLTGTIPS--SFKGFDKADFDGNSDLCGGPL 232
L G IP +S L L + ++NN+L+G IP F+ F A F N LCG PL
Sbjct: 689 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL 742
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 31/166 (18%)
Query: 69 LSSWSFGNSTIGFICQFVGVSCWNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLS 128
LSS +F + +CQ + +N + L L+ +GKIP L C + L LS
Sbjct: 372 LSSNNFSGPILPNLCQ--------NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 423
Query: 129 ANDLSGNIPAQICN-----------------------WLPYLVXXXXXXXXXXGPIPADL 165
N LSG IP+ + + ++ L G IP+ L
Sbjct: 424 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 483
Query: 166 GNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPS 211
NCT LN + LSNN+L+G IP + L L ++NN +G IP+
Sbjct: 484 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 529
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 97 RILNLELREMKLSGKIPEPL-KFCKSMQRLDLSANDLSGNIPAQIC-NWLPYLVXXXXXX 154
++L+L E SG++PE L S+ LDLS+N+ SG I +C N L
Sbjct: 343 KVLDLSFNE--FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 400
Query: 155 XXXXGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210
G IP L NC+ L +L LS N LSG IP L +L +L+ + N L G IP
Sbjct: 401 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 456
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 102 ELREMKL-----SGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXX 156
+LR++KL G+IP+ L + K+++ L L NDL+G IP+ + N L
Sbjct: 440 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT-NLNWISLSNNR 498
Query: 157 XXGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSF 213
G IP +G L L LSNN SG IP +L + L + N GTIP++
Sbjct: 499 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 107 KLSGKIP-EPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXXXXGPIPADL 165
SG++P + L + ++ LDLS N+ SG +P + N L+ GPI +L
Sbjct: 326 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 385
Query: 166 GNC----TYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDK 218
C L L L NN +G IP LSN L ++ N L+GTIPSS K
Sbjct: 386 --CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 440
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 119 CKSMQRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXXXXGPIPADLGNCTYLNTLILSN 178
C ++ L +S N +SG++ C L +L IP LG+C+ L L +S
Sbjct: 174 CGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTG---IPF-LGDCSALQHLDISG 229
Query: 179 NKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210
NKLSG +S LK ++++N G IP
Sbjct: 230 NKLSGDFSRAISTCTELKLLNISSNQFVGPIP 261
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 102 ELREMKLSG-KIPEPLKF--CKSMQRLDLSANDLSGNIP-AQICNWLPYLVXXXXXXXXX 157
EL+ + +SG KI + C +++ LD+S+N+ S IP C+ L +L
Sbjct: 176 ELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHL---DISGNKL 232
Query: 158 XGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG 215
G + CT L L +S+N+ GPIP L L+ S+A N TG IP G
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSG 288
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 100 NLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXXXXG 159
+L++ KLSG + C ++ L++S+N G IP L YL G
Sbjct: 224 HLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYL---SLAENKFTG 280
Query: 160 PIPADL-GNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210
IP L G C L L LS N G +P + L+ ++++N+ +G +P
Sbjct: 281 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 332
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 101 LELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIP 137
L+L KL G+IP+ + + +DLS N+LSG IP
Sbjct: 682 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 91 WNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQI 140
W + + L+L SG IP L C+S+ LDL+ N +G IPA +
Sbjct: 506 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 338 GTTYKAMLPDGSV-LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G Y+ + S+ +AVK L + ++F E + +++HPNL LLG C E +
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 84
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
I ++M+ G L L + N E+ + + + +L + F+H+++ + L
Sbjct: 85 ITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCL 141
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
V E+ ++ DFGL++LMT ++ + APE + S+K DV+ GV+L
Sbjct: 142 VGENHLVKVADFGLSRLMTGDTFTAHAGAKFP-IKWTAPESLAYNKFSIKSDVWAFGVLL 200
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
E+A + + ++ S E + +G E++ + ++ C P DR S
Sbjct: 201 WEIATYGMSPYPGIDP-SQVYELLEKDYRMERPEGCPEKVYELMRA---CWQWNPSDRPS 256
Query: 576 MYQVYQSLNSIAAQHGFSERYDE 598
+++Q+ ++ + S+ ++
Sbjct: 257 FAEIHQAFETMFQESSISDEVEK 279
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 121 SMQRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXXXXGPIPADLGNCTYLNTLILSNNK 180
SM LD+S N LSG IP +I + +PYL G IP ++G+ LN L LS+NK
Sbjct: 633 SMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691
Query: 181 LSGPIPYQLSNLGRLKKFSVANNDLTGTIPS--SFKGFDKADFDGNSDLCGGPL 232
L G IP +S L L + ++NN+L+G IP F+ F A F N LCG PL
Sbjct: 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL 745
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 72/166 (43%), Gaps = 31/166 (18%)
Query: 69 LSSWSFGNSTIGFICQFVGVSCWNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLS 128
LSS +F + +CQ + +N + L L+ +GKIP L C + L LS
Sbjct: 375 LSSNNFSGPILPNLCQ--------NPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426
Query: 129 ANDLSGNIPAQICN-----------------------WLPYLVXXXXXXXXXXGPIPADL 165
N LSG IP+ + + ++ L G IP+ L
Sbjct: 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486
Query: 166 GNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPS 211
NCT LN + LSNN+L+G IP + L L ++NN +G IP+
Sbjct: 487 SNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPA 532
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 97 RILNLELREMKLSGKIPEPL-KFCKSMQRLDLSANDLSGNIPAQIC-NWLPYLVXXXXXX 154
++L+L E SG++PE L S+ LDLS+N+ SG I +C N L
Sbjct: 346 KVLDLSFNE--FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQN 403
Query: 155 XXXXGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210
G IP L NC+ L +L LS N LSG IP L +L +L+ + N L G IP
Sbjct: 404 NGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIP 459
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 102 ELREMKL-----SGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXX 156
+LR++KL G+IP+ L + K+++ L L NDL+G IP+ + N L
Sbjct: 443 KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT-NLNWISLSNNR 501
Query: 157 XXGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSF 213
G IP +G L L LSNN SG IP +L + L + N GTIP++
Sbjct: 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 107 KLSGKIP-EPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXXXXGPIPADL 165
SG++P + L + ++ LDLS N+ SG +P + N L+ GPI +L
Sbjct: 329 NFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL 388
Query: 166 GNC----TYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDK 218
C L L L NN +G IP LSN L ++ N L+GTIPSS K
Sbjct: 389 --CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSK 443
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 119 CKSMQRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXXXXGPIPADLGNCTYLNTLILSN 178
C ++ L +S N +SG++ C L +L IP LG+C+ L L +S
Sbjct: 177 CGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTG---IPF-LGDCSALQHLDISG 232
Query: 179 NKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210
NKLSG +S LK ++++N G IP
Sbjct: 233 NKLSGDFSRAISTCTELKLLNISSNQFVGPIP 264
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 9/118 (7%)
Query: 102 ELREMKLSG-KIPEPLKF--CKSMQRLDLSANDLSGNIP-AQICNWLPYLVXXXXXXXXX 157
EL+ + +SG KI + C +++ LD+S+N+ S IP C+ L +L
Sbjct: 179 ELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHL---DISGNKL 235
Query: 158 XGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG 215
G + CT L L +S+N+ GPIP L L+ S+A N TG IP G
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSG 291
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 100 NLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXXXXG 159
+L++ KLSG + C ++ L++S+N G IP L YL G
Sbjct: 227 HLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYL---SLAENKFTG 283
Query: 160 PIPADL-GNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210
IP L G C L L LS N G +P + L+ ++++N+ +G +P
Sbjct: 284 EIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP 335
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 101 LELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIP 137
L+L KL G+IP+ + + +DLS N+LSG IP
Sbjct: 685 LDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 91 WNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQI 140
W + + L+L SG IP L C+S+ LDL+ N +G IPA +
Sbjct: 509 WIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 30 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 78
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 88/187 (47%), Gaps = 12/187 (6%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 26 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 82
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L + T+ + I ARG+ +LH +H+++ SN I
Sbjct: 83 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNI 139
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + + S G ++APE + S + DVY
Sbjct: 140 FLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 199
Query: 512 GVVLLEL 518
G+VL EL
Sbjct: 200 GIVLYEL 206
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 20 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 68
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ +
Sbjct: 69 YAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---Y 125
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 126 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTI 184
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 185 KSDVWSFGILLTELT 199
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 279 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 327
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ +
Sbjct: 328 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---Y 384
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 385 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 444 KSDVWSFGILLTELT 458
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 30 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 78
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ +
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 23 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 71
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ +
Sbjct: 72 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---Y 128
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 188 KSDVWSFGILLTELT 202
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 196 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 244
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ + +
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 301
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 361 KSDVWSFGILLTELT 375
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 95/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 196 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 244
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ + +
Sbjct: 245 YAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 301
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 361 KSDVWSFGILLTELT 375
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 30 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 78
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ +
Sbjct: 79 YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 19 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 67
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ +
Sbjct: 68 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 124
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 184 KSDVWSFGILLTELT 198
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 196 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 244
Query: 387 YCVVEEEKLLIY-KYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + I +YMS G+L L+G + L P + A G+A++ + +
Sbjct: 245 YAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNY 301
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 361 KSDVWSFGILLTELT 375
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 21 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 69
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ +
Sbjct: 70 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 126
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 186 KSDVWSFGILLTELT 200
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 30 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 78
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 30 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 78
Query: 387 YCVVEEEKLLIY-KYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + I +YMS G+L L+G + L P + A G+A++ +
Sbjct: 79 YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 87/187 (46%), Gaps = 12/187 (6%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 38 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 94
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L + T+ + I ARG+ +LH +H+++ SN I
Sbjct: 95 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNI 151
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + S G ++APE + S + DVY
Sbjct: 152 FLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 512 GVVLLEL 518
G+VL EL
Sbjct: 212 GIVLYEL 218
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 30 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 78
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G L L+G + L P + A G+A++ +
Sbjct: 79 YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + ++RH L L
Sbjct: 30 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQL-- 78
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 86/187 (45%), Gaps = 12/187 (6%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY +
Sbjct: 38 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQ-L 94
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L + T+ + I ARG+ +LH +H+++ SN I
Sbjct: 95 AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNI 151
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + S G ++APE + S + DVY
Sbjct: 152 FLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 512 GVVLLEL 518
G+VL EL
Sbjct: 212 GIVLYEL 218
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 14/240 (5%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E+ F E + +L HP L L G C+ + L++++M G L L
Sbjct: 37 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 96
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ T + L G+A+L C +H+++ + LV E+ ++ DFG+
Sbjct: 97 RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMT 153
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVN 530
+ + D+ + G + +PE S S K DV+ GV++ E+ F + + N
Sbjct: 154 RFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV--FSEGKIPYEN 210
Query: 531 QLSSSGRSKEAIDKALCG-KGYDEEI--LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIA 587
+ +S E ++ G + Y + ++ +C RP+DR + ++ + L IA
Sbjct: 211 RSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 265
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 30 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 78
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G L L+G + L P + A G+A++ +
Sbjct: 79 YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN---Y 135
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 195 KSDVWSFGILLTELT 209
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 14/240 (5%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E+ F E + +L HP L L G C+ + L++++M G L L
Sbjct: 34 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 93
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ T + L G+A+L C +H+++ + LV E+ ++ DFG+
Sbjct: 94 RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMT 150
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVN 530
+ + D+ + G + +PE S S K DV+ GV++ E+ F + + N
Sbjct: 151 RFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV--FSEGKIPYEN 207
Query: 531 QLSSSGRSKEAIDKALCG-KGYDEEI--LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIA 587
+ +S E ++ G + Y + ++ +C RP+DR + ++ + L IA
Sbjct: 208 RSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 262
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 14/240 (5%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E+ F E + +L HP L L G C+ + L++++M G L L
Sbjct: 32 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 91
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ T + L G+A+L C +H+++ + LV E+ ++ DFG+
Sbjct: 92 RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMT 148
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVN 530
+ + D+ + G + +PE S S K DV+ GV++ E+ F + + N
Sbjct: 149 RFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV--FSEGKIPYEN 205
Query: 531 QLSSSGRSKEAIDKALCG-KGYDEEI--LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIA 587
+ +S E ++ G + Y + ++ +C RP+DR + ++ + L IA
Sbjct: 206 RSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 260
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 27 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 75
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YM+ G+L L+G + L P + A G+A++ +
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---Y 132
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 192 KSDVWSFGILLTELT 206
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 27 CFGEVWMGTWNGTTR---------VAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQL-- 75
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YM+ G+L L+G + L P + A G+A++ +
Sbjct: 76 YAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---Y 132
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGLA+L+ +E + G + APE + ++
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLI-EDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 192 KSDVWSFGILLTELT 206
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 94/195 (48%), Gaps = 17/195 (8%)
Query: 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG 386
C V + T GTT +A+K L + + F E + +LRH L L
Sbjct: 197 CFGEVWMGTWNGTTR---------VAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQL-- 245
Query: 387 YCVVEEEKL-LIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPF 444
Y VV EE + ++ +YMS G+L L+G + L P + A G+A++ + +
Sbjct: 246 YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE---RMNY 302
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ + ILV E+ ++ DFGL +L+ +E + G + APE + ++
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLI-EDNEYTARQGAKFPIKWTAPEAALYGRFTI 361
Query: 505 KGDVYGIGVVLLELA 519
K DV+ G++L EL
Sbjct: 362 KSDVWSFGILLTELT 376
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 14/240 (5%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E F E + +L HP L L G C+ + L++++M G L L
Sbjct: 54 VAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 113
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ T + L G+A+L C +H+++ + LV E+ ++ DFG+
Sbjct: 114 RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMT 170
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVN 530
+ + D+ + G + +PE S S K DV+ GV++ E+ F + + N
Sbjct: 171 RFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV--FSEGKIPYEN 227
Query: 531 QLSSSGRSKEAIDKALCG-KGYDEEI--LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIA 587
+ +S E ++ G + Y + ++ +C RP+DR + ++ + L IA
Sbjct: 228 RSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA 282
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 92/200 (46%), Gaps = 13/200 (6%)
Query: 328 SENVIISTRTG-----TTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNL 381
+ V++STR G T YK D +V +K ++ + FRNE+ L + RH N+
Sbjct: 35 ASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI 94
Query: 382 APLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQ 441
+GY + ++ ++ ++ +LY L T+ I A+G+ +LH
Sbjct: 95 LLFMGY-MTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---A 150
Query: 442 PPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSS 498
+H+++ SN I + E +I DFGLA + + S V G ++APE
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 499 TMVASLKGDVYGIGVVLLEL 518
S + DVY G+VL EL
Sbjct: 211 NNPFSFQSDVYSYGIVLYEL 230
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 110/241 (45%), Gaps = 14/241 (5%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E+ F E + +L HP L L G C+ + L++++M G L L
Sbjct: 34 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL 93
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ T + L G+A+L + +H+++ + LV E+ ++ DFG+
Sbjct: 94 RTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMT 150
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVN 530
+ + D+ + G + +PE S S K DV+ GV++ E+ F + + N
Sbjct: 151 RFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV--FSEGKIPYEN 207
Query: 531 QLSSSGRSKEAIDKALCG-KGYDEEI--LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIA 587
+ +S E ++ G + Y + ++ +C RP+DR + ++ + L +IA
Sbjct: 208 RSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIA 262
Query: 588 A 588
A
Sbjct: 263 A 263
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 121 FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 177
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 178 LARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 14/240 (5%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E+ F E + +L HP L L G C+ + L+ ++M G L L
Sbjct: 35 VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL 94
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ T + L G+A+L C +H+++ + LV E+ ++ DFG+
Sbjct: 95 RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMT 151
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVN 530
+ + D+ + G + +PE S S K DV+ GV++ E+ F + + N
Sbjct: 152 RFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV--FSEGKIPYEN 208
Query: 531 QLSSSGRSKEAIDKALCG-KGYDEEI--LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIA 587
+ +S E ++ G + Y + ++ +C RP+DR + ++ + L IA
Sbjct: 209 RSNS-----EVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA 263
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 36 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 93
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ + ++H+N+ + ILV + +I DFG
Sbjct: 94 LKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFG 150
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 151 LARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 202
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 203 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 250
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 24 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 80
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L T+ + I A+G+ +LH +H+++ SN I
Sbjct: 81 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI 137
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + + S G ++APE S + DVY
Sbjct: 138 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 197
Query: 512 GVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
G+VL EL QL S + + G+GY L KV NC
Sbjct: 198 GIVLYELM---------TGQLPYSNINNRDQIIFMVGRGYLSPDLS--KVRSNC 240
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 27 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 83
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L T+ + I A+G+ +LH +H+++ SN I
Sbjct: 84 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI 140
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + + S G ++APE S + DVY
Sbjct: 141 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 512 GVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
G+VL EL QL S + + G+GY L KV NC
Sbjct: 201 GIVLYELM---------TGQLPYSNINNRDQIIFMVGRGYLSPDLS--KVRSNC 243
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 27 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 83
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L T+ + I A+G+ +LH +H+++ SN I
Sbjct: 84 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 140
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + + S G ++APE S + DVY
Sbjct: 141 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 200
Query: 512 GVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
G+VL EL QL S + + G+GY L KV NC
Sbjct: 201 GIVLYELM---------TGQLPYSNINNRDQIIFMVGRGYLSPDLS--KVRSNC 243
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 49 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 105
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L T+ + I A+G+ +LH +H+++ SN I
Sbjct: 106 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 162
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + + S G ++APE S + DVY
Sbjct: 163 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 222
Query: 512 GVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
G+VL EL QL S + + G+GY L KV NC
Sbjct: 223 GIVLYELM---------TGQLPYSNINNRDQIIFMVGRGYLSPDLS--KVRSNC 265
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 50 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 106
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L T+ + I A+G+ +LH +H+++ SN I
Sbjct: 107 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 163
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + + S G ++APE S + DVY
Sbjct: 164 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 512 GVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
G+VL EL QL S + + G+GY L KV NC
Sbjct: 224 GIVLYELM---------TGQLPYSNINNRDQIIFMVGRGYLSPDLS--KVRSNC 266
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 100/234 (42%), Gaps = 23/234 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 22 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 78
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L T+ + I A+G+ +LH +H+++ SN I
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI 135
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + + S G ++APE S + DVY
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 512 GVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
G+VL EL QL S + + G+GY L KV NC
Sbjct: 196 GIVLYELM---------TGQLPYSNINNRDQIIFMVGRGYLSPDLS--KVRSNC 238
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 99/234 (42%), Gaps = 23/234 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY +
Sbjct: 22 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLA 79
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
+ + ++ +LY L T+ + I A+G+ +LH +H+++ SN I
Sbjct: 80 I-VTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI 135
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + + S G ++APE S + DVY
Sbjct: 136 FLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 512 GVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
G+VL EL QL S + + G+GY L KV NC
Sbjct: 196 GIVLYELM---------TGQLPYSNINNRDQIIFMVGRGYLSPDLS--KVRSNC 238
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ +A +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 102 SLRDYLQAHAERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 158
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 80 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 139
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 140 FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 196
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 197 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 248
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 61 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 120
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 121 FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 177
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 178 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 229
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 179 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 54 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 113
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 114 FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 170
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 171 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 222
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 90/200 (45%), Gaps = 19/200 (9%)
Query: 336 RTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGY----CVVE 391
R G +KA L + V AVK + E+ L ++H N+ +G V+
Sbjct: 36 RFGCVWKAQLLNEYV-AVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVD 94
Query: 392 EEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHH-------GCQPPF 444
+ LI + G+L L+ N + W I ARGLA+LH G +P
Sbjct: 95 VDLWLITAFHEKGSLSDFLKANV--VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAI 152
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMV--- 501
H++I S +L+ + A I DFGLA + + +G +G Y+APE +
Sbjct: 153 SHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQ 212
Query: 502 --ASLKGDVYGIGVVLLELA 519
A L+ D+Y +G+VL ELA
Sbjct: 213 RDAFLRIDMYAMGLVLWELA 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 120 FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 176
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 177 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+A+K L + + F E + +L+H L L Y VV EE + ++ +YM+ G+L
Sbjct: 36 VAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQL--YAVVSEEPIYIVTEYMNKGSLLDF 93
Query: 410 LQ-GNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ G L P + A G+A++ ++H+++ S ILV +I DFG
Sbjct: 94 LKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGNGLICKIADFG 150
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
LA+L+ +E + G + APE + ++K DV+ G++L EL
Sbjct: 151 LARLI-EDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELV 200
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 48 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 105
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 106 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 162
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 163 LARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 214
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 215 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 262
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 49 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 106
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 107 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 163
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 164 LARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 215
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 216 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 263
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 59 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 118
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 119 FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 175
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 176 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 227
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 40 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 97
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 154
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 155 LARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 206
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 207 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 254
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 81 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 140
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 141 FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 197
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 198 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 249
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 46 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 103
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 104 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 160
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 161 LARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 212
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 213 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 260
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 179 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 57 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 116
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 117 FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 173
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 174 LARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+AVK + + E +F E + +L HP L G C E ++ +Y+S+G L + L
Sbjct: 35 VAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL 94
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ + L+ + G+A+L F+H+++ + LVD D ++ DFG+
Sbjct: 95 RSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMT 151
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + S V G + APE S K DV+ G+++ E+
Sbjct: 152 RYVLDDQYVSSV-GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 198
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 60 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 119
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 120 FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 176
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 177 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 228
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 123 FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 179
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 180 LARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 42 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 99
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 100 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 156
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 157 LARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 208
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 209 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 256
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 63 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 122
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 123 FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 179
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 180 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 231
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 23/254 (9%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G V+ +K L + ++ F E+ + L HPN+ +G ++ I +Y+ GTL
Sbjct: 35 GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
+++ ++ W R A G+A+LH +H+++ S+ LV E+ + + D
Sbjct: 95 RGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVAD 151
Query: 467 FGLAKLMTSSDESSFVNG--------------DLGEFGYIAPEYSSTMVASLKGDVYGIG 512
FGLA+LM DE + G +G ++APE + K DV+ G
Sbjct: 152 FGLARLMV--DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFG 209
Query: 513 VVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKD 572
+VL E+ G D++ + G + C F + C P+
Sbjct: 210 IVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPP---SFFPITVRCCDLDPEK 266
Query: 573 RWSMYQVYQSLNSI 586
R S ++ L ++
Sbjct: 267 RPSFVKLEHWLETL 280
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 110/238 (46%), Gaps = 31/238 (13%)
Query: 322 ASNSFCSENVIISTRTGTTYKA-MLPDGSVLAVKRL------NTCKLGEK--KFRNEMNR 372
A N E I G +K ++ D SV+A+K L ++ EK +F+ E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 373 LGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARG 432
+ L HPN+ L Y ++ ++ +++ G LY L A + W + R+ L A G
Sbjct: 77 MSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 433 LAWLHHGCQPPFLHQNICS-NVIL--VDEDFD--ARIMDFGLAKLMTSSDESSFVNGDLG 487
+ ++ + PP +H+++ S N+ L +DE+ A++ DFGL++ S V+G LG
Sbjct: 135 IEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHS-----VSGLLG 188
Query: 488 EFGYIAPEYSSTMVASL--KGDVYGIGVVLLELAGFKGNL-------VDWVNQLSSSG 536
F ++APE S K D Y ++L + +G + ++N + G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 179 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 67 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 126
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 127 FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 183
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 184 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 235
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 46 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 103
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 104 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 160
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 161 LARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 212
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 213 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 260
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 41 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 98
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 99 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 155
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 156 LARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 207
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 208 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 255
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 62 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 121
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 122 FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 178
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 179 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 230
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 40 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 97
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 154
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ + E + G + APE + ++K DV+ G++L E+
Sbjct: 155 LARLIEDA-EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 206
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 207 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 254
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 40 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 97
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 154
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 155 LARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 206
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 207 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 254
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 45 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 102
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 103 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 159
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 160 LARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 211
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 212 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 259
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 81/172 (47%), Gaps = 8/172 (4%)
Query: 352 AVKRLN-TCKLGE-KKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYMSSGTLYS 408
AVK LN +GE +F E + HPN+ LLG C+ E L++ YM G L +
Sbjct: 121 AVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRN 180
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ GL A+G+ +L F+H+++ + ++DE F ++ DFG
Sbjct: 181 FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFG 237
Query: 469 LAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
LA+ M + S N G ++A E T + K DV+ GV+L EL
Sbjct: 238 LARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL 289
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 50 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 107
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 108 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 164
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 165 LARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 216
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 217 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 264
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 108/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 40 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 97
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ ++H+++ + ILV + +I DFG
Sbjct: 98 LKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFG 154
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 155 LARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 206
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 207 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 254
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 99/234 (42%), Gaps = 23/234 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 22 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 78
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L T+ + I A+G+ +LH +H+++ SN I
Sbjct: 79 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNI 135
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + S G ++APE S + DVY
Sbjct: 136 FLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 195
Query: 512 GVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
G+VL EL QL S + + G+GY L KV NC
Sbjct: 196 GIVLYELM---------TGQLPYSNINNRDQIIFMVGRGYLSPDLS--KVRSNC 238
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 99/234 (42%), Gaps = 23/234 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 42 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 98
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L T+ + I A+G+ +LH +H+++ SN I
Sbjct: 99 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 155
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + S G ++APE S + DVY
Sbjct: 156 FLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 215
Query: 512 GVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
G+VL EL QL S + + G+GY L KV NC
Sbjct: 216 GIVLYELM---------TGQLPYSNINNRDQIIFMVGRGYLSPDLS--KVRSNC 258
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+N+ + ILV+ + +I
Sbjct: 100 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRNLATRNILVENENRVKI 156
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 157 GDFGLTKVLPQDKEYYKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 214
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397
G + + + +AVK L + + F E N + L+H L L EE +I
Sbjct: 27 GEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYII 86
Query: 398 YKYMSSGTLYSLLQGN-ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456
+YM+ G+L L+ + ++ P A G+A++ ++H+++ + +LV
Sbjct: 87 TEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLV 143
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
E +I DFGLA+++ +E + G + APE + ++K DV+ G++L
Sbjct: 144 SESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLY 202
Query: 517 ELAGF 521
E+ +
Sbjct: 203 EIVTY 207
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 14/163 (8%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRF 423
+ R E L+HPN+ L G C+ E L+ ++ G L +L G D +
Sbjct: 51 ENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW 110
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD--------ARIMDFGLAKLMTS 475
+ + ARG+ +LH P +H+++ S+ IL+ + + +I DFGLA+
Sbjct: 111 AVQI--ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHR 168
Query: 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + S G + ++APE + S DV+ GV+L EL
Sbjct: 169 TTKMSAA----GAYAWMAPEVIRASMFSKGSDVWSYGVLLWEL 207
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 109/233 (46%), Gaps = 28/233 (12%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSL 409
+AVK L + F E N + QL+H L L Y VV +E + +I +YM +G+L
Sbjct: 35 VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRL--YAVVTQEPIYIITEYMENGSLVDF 92
Query: 410 LQG-NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ + +L + A G+A++ + ++H+++ + ILV + +I DFG
Sbjct: 93 LKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW 528
LA+L+ +E + G + APE + ++K DV+ G++L E+
Sbjct: 150 LARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTH------- 201
Query: 529 VNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVSRPKDR 573
++ G + + + L +GY EE+ Q +++ C RP+DR
Sbjct: 202 -GRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRL---CWKERPEDR 249
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 99/234 (42%), Gaps = 23/234 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
GT YK G V AVK LN ++ F+NE+ L + RH N+ +GY + +
Sbjct: 50 GTVYKGKW-HGDV-AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-KPQL 106
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ +LY L T+ + I A+G+ +LH +H+++ SN I
Sbjct: 107 AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKSNNI 163
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE---YSSTMVASLKGDVYGI 511
+ ED +I DFGLA + S G ++APE S + DVY
Sbjct: 164 FLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAF 223
Query: 512 GVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
G+VL EL QL S + + G+GY L KV NC
Sbjct: 224 GIVLYELM---------TGQLPYSNINNRDQIIFMVGRGYLSPDLS--KVRSNC 266
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 31/238 (13%)
Query: 322 ASNSFCSENVIISTRTGTTYKA-MLPDGSVLAVKRL------NTCKLGEK--KFRNEMNR 372
A N E I G +K ++ D SV+A+K L ++ EK +F+ E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 373 LGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARG 432
+ L HPN+ L Y ++ ++ +++ G LY L A + W + R+ L A G
Sbjct: 77 MSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 433 LAWLHHGCQPPFLHQNICS-NVIL--VDEDFD--ARIMDFGLAKLMTSSDESSFVNGDLG 487
+ ++ + PP +H+++ S N+ L +DE+ A++ DFG TS V+G LG
Sbjct: 135 IEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----TSQQSVHSVSGLLG 188
Query: 488 EFGYIAPEYSSTMVASL--KGDVYGIGVVLLELAGFKGNL-------VDWVNQLSSSG 536
F ++APE S K D Y ++L + +G + ++N + G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 98 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 154
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 155 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 97 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 153
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 154 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 155
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 155
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 156 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 104 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 160
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 161 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 218
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 103 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 159
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 160 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 102 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 158
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 106 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 162
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 163 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 220
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 173
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 231
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 105 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 161
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 162 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 130 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 186
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 187 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 244
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 117 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 173
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 174 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 231
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 89/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +Y+ G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 99 SLRDYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 155
Query: 465 MDFGLAKLMTSSDESSFVNGDLGE--FGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ D+ F + GE + APE + S+ DV+ GVVL EL +
Sbjct: 156 GDFGLTKVL-PQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTY 213
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 109/238 (45%), Gaps = 31/238 (13%)
Query: 322 ASNSFCSENVIISTRTGTTYKA-MLPDGSVLAVKRL------NTCKLGEK--KFRNEMNR 372
A N E I G +K ++ D SV+A+K L ++ EK +F+ E+
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 373 LGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARG 432
+ L HPN+ L Y ++ ++ +++ G LY L A + W + R+ L A G
Sbjct: 77 MSNLNHPNIVKL--YGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 433 LAWLHHGCQPPFLHQNICS-NVIL--VDEDFD--ARIMDFGLAKLMTSSDESSFVNGDLG 487
+ ++ + PP +H+++ S N+ L +DE+ A++ DF L++ S V+G LG
Sbjct: 135 IEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHS-----VSGLLG 188
Query: 488 EFGYIAPEYSSTMVASL--KGDVYGIGVVLLELAGFKGNL-------VDWVNQLSSSG 536
F ++APE S K D Y ++L + +G + ++N + G
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEG 246
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
YM +G+L S L+ + + + G A G+ +L F+H+++ + IL++ +
Sbjct: 127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSN 183
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 519 AGF 521
+
Sbjct: 244 MSY 246
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 25/254 (9%)
Query: 347 DGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401
D +++AVK +C+ + KF E L Q HPN+ L+G C ++ ++ + +
Sbjct: 138 DNTLVAVK---SCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV 194
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G + L+ L T ++ AA G+ +L C +H+++ + LV E
Sbjct: 195 QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNV 251
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGE--FGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
+I DFG+++ +D +G L + + APE + S + DV+ G++L E
Sbjct: 252 LKISDFGMSR--EEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET- 308
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKA---LCGKGYDEEILQFLKVACNCVVSRPKDRWSM 576
F + N S+ +++E ++K C + + + + ++ C P R S
Sbjct: 309 -FSLGASPYPN--LSNQQTREFVEKGGRLPCPELCPDAVFRLME---QCWAYEPGQRPSF 362
Query: 577 YQVYQSLNSIAAQH 590
+YQ L SI +H
Sbjct: 363 STIYQELQSIRKRH 376
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
YM +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGLA+++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 184 LVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 519 AGF 521
+
Sbjct: 244 MSY 246
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNA-TELDWPT 421
+ F E + + QLRH NL LLG V E+ L ++ +YM+ G+L L+ + L
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481
+ L + +L F+H+++ + +LV ED A++ DFGL K +S+ ++
Sbjct: 110 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-- 164
Query: 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
G L + APE S K DV+ G++L E+ F
Sbjct: 165 --GKL-PVKWTAPEALREAAFSTKSDVWSFGILLWEIYSF 201
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 348 GSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSG 404
G V+AVK+L ++ + + F E+ L L+H N+ G C + LI +++ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
+L LQ + +D + +G+ +L G + ++H+++ + ILV+ + +I
Sbjct: 102 SLREYLQKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKI 158
Query: 465 MDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
DFGL K++ E V G+ F Y APE + S+ DV+ GVVL EL +
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWY-APESLTESKFSVASDVWSFGVVLYELFTY 216
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 114/254 (44%), Gaps = 25/254 (9%)
Query: 347 DGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401
D +++AVK +C+ + KF E L Q HPN+ L+G C ++ ++ + +
Sbjct: 138 DNTLVAVK---SCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELV 194
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G + L+ L T ++ AA G+ +L C +H+++ + LV E
Sbjct: 195 QGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNV 251
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGE--FGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
+I DFG+++ +D +G L + + APE + S + DV+ G++L E
Sbjct: 252 LKISDFGMSR--EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWET- 308
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKA---LCGKGYDEEILQFLKVACNCVVSRPKDRWSM 576
F + N S+ +++E ++K C + + + + ++ C P R S
Sbjct: 309 -FSLGASPYPN--LSNQQTREFVEKGGRLPCPELCPDAVFRLME---QCWAYEPGQRPSF 362
Query: 577 YQVYQSLNSIAAQH 590
+YQ L SI +H
Sbjct: 363 STIYQELQSIRKRH 376
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 39 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 97
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
YM +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 98 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 154
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 519 AGF 521
+
Sbjct: 215 MSY 217
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 121/292 (41%), Gaps = 47/292 (16%)
Query: 324 NSFCSENVIISTRTGTTYKAMLP-DGSVL--AVKRLN--TCKLGEKKFRNEMNRLGQL-R 377
N ++VI G KA + DG + A+KR+ K + F E+ L +L
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 378 HPNLAPLLGYCVVEEEKLLIYKYMSSGTL---------------YSLLQGNATELDWPTR 422
HPN+ LLG C L +Y G L +++ A+ L
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 423 FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV 482
ARG+ +L Q F+H+N+ + ILV E++ A+I DFGL S + +V
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGL-----SRGQEVYV 193
Query: 483 NGDLGEFG--YIAPEYSSTMVASLKGDVYGIGVVLLELAGFKG------NLVDWVNQLSS 534
+G ++A E + V + DV+ GV+L E+ G + +L
Sbjct: 194 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 253
Query: 535 SGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSI 586
R ++ ++ C D+E+ ++ C +P +R S Q+ SLN +
Sbjct: 254 GYRLEKPLN---C----DDEVYDLMR---QCWREKPYERPSFAQILVSLNRM 295
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNA-TELDWPT 421
+ F E + + QLRH NL LLG V E+ L ++ +YM+ G+L L+ + L
Sbjct: 44 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 103
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481
+ L + +L F+H+++ + +LV ED A++ DFGL K +S+ ++
Sbjct: 104 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-- 158
Query: 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
G L + APE S K DV+ G++L E+ F
Sbjct: 159 --GKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 195
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNA-TELDWPT 421
+ F E + + QLRH NL LLG V E+ L ++ +YM+ G+L L+ + L
Sbjct: 231 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 290
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481
+ L + +L F+H+++ + +LV ED A++ DFGL K +S+ ++
Sbjct: 291 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-- 345
Query: 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
G L + APE S K DV+ G++L E+ F
Sbjct: 346 --GKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 382
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 66 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 124
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
YM +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 125 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 181
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 182 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 241
Query: 519 AGF 521
+
Sbjct: 242 MSY 244
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 56 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 114
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
YM +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 115 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 171
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 172 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 231
Query: 519 AGF 521
+
Sbjct: 232 MSY 234
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
YM +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 519 AGF 521
+
Sbjct: 244 MSY 246
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNA-TELDWPT 421
+ F E + + QLRH NL LLG V E+ L ++ +YM+ G+L L+ + L
Sbjct: 59 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 118
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481
+ L + +L F+H+++ + +LV ED A++ DFGL K +S+ ++
Sbjct: 119 LLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDT-- 173
Query: 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
G L + APE S K DV+ G++L E+ F
Sbjct: 174 --GKL-PVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 210
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
YM +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 519 AGF 521
+
Sbjct: 244 MSY 246
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
YM +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 519 AGF 521
+
Sbjct: 244 MSY 246
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
YM +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 519 AGF 521
+
Sbjct: 244 MSY 246
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 348 GSVLAVKRLNTCKLGE----KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AVK LN K+ K R E+ L RHP++ L + ++ +Y+S
Sbjct: 41 GHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100
Query: 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463
G L+ + N LD R+ G+ + H +H+++ +L+D +A+
Sbjct: 101 GELFDYICKNG-RLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAK 156
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY-SSTMVASLKGDVYGIGVVLLEL 518
I DFGL+ +M+ + F+ G Y APE S + A + D++ GV+L L
Sbjct: 157 IADFGLSNMMS---DGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYAL 209
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 115/255 (45%), Gaps = 27/255 (10%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397
G + A + +AVK + + + F E N + L+H L L V +E +I
Sbjct: 29 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYII 87
Query: 398 YKYMSSGTLYSLLQGN-ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456
++M+ G+L L+ + ++ P A G+A++ Q ++H+++ + ILV
Sbjct: 88 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILV 144
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
+I DFGLA+++ +E + G + APE + ++K DV+ G++L+
Sbjct: 145 SASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLM 203
Query: 517 ELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVS 568
E+ + ++ G S + +AL +GY EE+ + C +
Sbjct: 204 EIVTY--------GRIPYPGMSNPEVIRAL-ERGYRMPRPENCPEELYNIM---MRCWKN 251
Query: 569 RPKDRWSMYQVYQSL 583
RP++R ++ QS+
Sbjct: 252 RPEER-PTFEYIQSV 265
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 83/188 (44%), Gaps = 16/188 (8%)
Query: 347 DGSVLAVKRL-NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
D ++AVK L + K F E L L+H ++ G CV + +++++YM G
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 406 LYSLLQGNA------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L L+ + TEL I A G+ +L F+H+++ +
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRN 158
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGV 513
LV E+ +I DFG+++ + S+D + ++ PE + + DV+ +GV
Sbjct: 159 CLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGV 218
Query: 514 VLLELAGF 521
VL E+ +
Sbjct: 219 VLWEIFTY 226
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
YM +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 127 YMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL +++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 519 AGF 521
+
Sbjct: 244 MSY 246
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 5/185 (2%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397
G + + + +AVK L + + F E N + L+H L L EE +I
Sbjct: 26 GEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYII 85
Query: 398 YKYMSSGTLYSLLQGN-ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456
++M+ G+L L+ + ++ P A G+A++ ++H+++ + +LV
Sbjct: 86 TEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLV 142
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
E +I DFGLA+++ +E + G + APE + ++K +V+ G++L
Sbjct: 143 SESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLY 201
Query: 517 ELAGF 521
E+ +
Sbjct: 202 EIVTY 206
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 329 ENVIISTRTGTTYKAM-LPDGSVLAVKRLN--TCKLGEKKFRNEMNRLGQLRHPNLAPLL 385
+ VI S T A P +A+KR+N C+ + E+ + Q HPN+
Sbjct: 20 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 79
Query: 386 GYCVVEEEKLLIYKYMSSGTLYSLLQGNATE-------LDWPTRFRIGLGAARGLAWLHH 438
VV++E L+ K +S G++ +++ + LD T I GL +LH
Sbjct: 80 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 139
Query: 439 GCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE---SSFVNGDLGEFGYIAPE 495
Q +H+++ + IL+ ED +I DFG++ + + + + +G ++APE
Sbjct: 140 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 196
Query: 496 YSSTMVA-SLKGDVYGIGVVLLELA 519
+ K D++ G+ +ELA
Sbjct: 197 VMEQVRGYDFKADIWSFGITAIELA 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 17/205 (8%)
Query: 329 ENVIISTRTGTTYKAM-LPDGSVLAVKRLN--TCKLGEKKFRNEMNRLGQLRHPNLAPLL 385
+ VI S T A P +A+KR+N C+ + E+ + Q HPN+
Sbjct: 15 QEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYY 74
Query: 386 GYCVVEEEKLLIYKYMSSGTLYSLLQGNATE-------LDWPTRFRIGLGAARGLAWLHH 438
VV++E L+ K +S G++ +++ + LD T I GL +LH
Sbjct: 75 TSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK 134
Query: 439 GCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE---SSFVNGDLGEFGYIAPE 495
Q +H+++ + IL+ ED +I DFG++ + + + + +G ++APE
Sbjct: 135 NGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPE 191
Query: 496 YSSTMVA-SLKGDVYGIGVVLLELA 519
+ K D++ G+ +ELA
Sbjct: 192 VMEQVRGYDFKADIWSFGITAIELA 216
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 26/245 (10%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397
G + A + +AVK + + + F E N + L+H L L V +E +I
Sbjct: 202 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYII 260
Query: 398 YKYMSSGTLYSLLQGN-ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456
++M+ G+L L+ + ++ P A G+A++ Q ++H+++ + ILV
Sbjct: 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILV 317
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
+I DFGLA+++ +E + G + APE + ++K DV+ G++L+
Sbjct: 318 SASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLM 376
Query: 517 ELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVS 568
E+ + ++ G S + +AL +GY EE+ + C +
Sbjct: 377 EIVTY--------GRIPYPGMSNPEVIRAL-ERGYRMPRPENCPEELYNIM---MRCWKN 424
Query: 569 RPKDR 573
RP++R
Sbjct: 425 RPEER 429
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 36/244 (14%)
Query: 307 FQKPLV----KVKLADLMAASNSFCSENVIISTRTGTTYKAML------PDGSVLAVKRL 356
+ PL+ + KL ++ ++ F E + R G YK L +A+K L
Sbjct: 7 MEMPLINQHKQAKLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL 64
Query: 357 NTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL---- 410
G ++FR+E +L+HPN+ LLG ++ +I+ Y S G L+ L
Sbjct: 65 KDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRS 124
Query: 411 -----------QGNATELDWPTRFRIGLGAARGLAWL--HHGCQPPFLHQNICSNVILVD 457
+ + L+ P + A G+ +L HH +H+++ + +LV
Sbjct: 125 PHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVY 179
Query: 458 EDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLE 517
+ + +I D GL + + ++D + L ++APE S+ D++ GVVL E
Sbjct: 180 DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWE 239
Query: 518 LAGF 521
+ +
Sbjct: 240 VFSY 243
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP L V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 45 LPGKRELPVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTE 103
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGL-AWLHHGCQPPFLHQNICSNVILVDE 458
YM +G+L + L+ N + T ++ +G RG+ A + + ++H+++ + IL++
Sbjct: 104 YMENGSLDTFLKKNDGQF---TVIQL-VGMLRGISAGMKYLSDMGYVHRDLAARNILINS 159
Query: 459 DFDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLE 517
+ ++ DFGL++++ E+++ G + APE + + DV+ G+V+ E
Sbjct: 160 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWE 219
Query: 518 LAGF 521
+ +
Sbjct: 220 VVSY 223
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 47/292 (16%)
Query: 324 NSFCSENVIISTRTGTTYKAMLP-DGSVL--AVKRLN--TCKLGEKKFRNEMNRLGQL-R 377
N ++VI G KA + DG + A+KR+ K + F E+ L +L
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 378 HPNLAPLLGYCVVEEEKLLIYKYMSSGTL---------------YSLLQGNATELDWPTR 422
HPN+ LLG C L +Y G L +++ A+ L
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 423 FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV 482
ARG+ +L Q F+H+++ + ILV E++ A+I DFGL S + +V
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL-----SRGQEVYV 196
Query: 483 NGDLGEFG--YIAPEYSSTMVASLKGDVYGIGVVLLELAGFKG------NLVDWVNQLSS 534
+G ++A E + V + DV+ GV+L E+ G + +L
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 256
Query: 535 SGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSI 586
R ++ ++ C D+E+ ++ C +P +R S Q+ SLN +
Sbjct: 257 GYRLEKPLN---C----DDEVYDLMR---QCWREKPYERPSFAQILVSLNRM 298
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 121/292 (41%), Gaps = 47/292 (16%)
Query: 324 NSFCSENVIISTRTGTTYKAMLP-DGSVL--AVKRLN--TCKLGEKKFRNEMNRLGQL-R 377
N ++VI G KA + DG + A+KR+ K + F E+ L +L
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 378 HPNLAPLLGYCVVEEEKLLIYKYMSSGTL---------------YSLLQGNATELDWPTR 422
HPN+ LLG C L +Y G L +++ A+ L
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 423 FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV 482
ARG+ +L Q F+H+++ + ILV E++ A+I DFGL S + +V
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGL-----SRGQEVYV 186
Query: 483 NGDLGEFG--YIAPEYSSTMVASLKGDVYGIGVVLLELAGFKG------NLVDWVNQLSS 534
+G ++A E + V + DV+ GV+L E+ G + +L
Sbjct: 187 KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 246
Query: 535 SGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSI 586
R ++ ++ C D+E+ ++ C +P +R S Q+ SLN +
Sbjct: 247 GYRLEKPLN---C----DDEVYDLMR---QCWREKPYERPSFAQILVSLNRM 288
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 32/232 (13%)
Query: 315 KLADLMAASNSFCSENVIISTRTGTTYKAML------PDGSVLAVKRLNTCKLG--EKKF 366
KL ++ ++ F E + R G YK L +A+K L G ++F
Sbjct: 2 KLKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEF 59
Query: 367 RNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL---------------Q 411
R+E +L+HPN+ LLG ++ +I+ Y S G L+ L +
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 412 GNATELDWPTRFRIGLGAARGLAWL--HHGCQPPFLHQNICSNVILVDEDFDARIMDFGL 469
+ L+ P + A G+ +L HH +H+++ + +LV + + +I D GL
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSHH-----VVHKDLATRNVLVYDKLNVKISDLGL 174
Query: 470 AKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
+ + ++D + L ++APE S+ D++ GVVL E+ +
Sbjct: 175 FREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 226
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 93/201 (46%), Gaps = 11/201 (5%)
Query: 329 ENVIISTRTGTTYKAMLPDGS-----VLAVKRLNTCKLGEKK--FRNEMNRLGQLRHPNL 381
+ VI + G YK ML S +A+K L +++ F E +GQ H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 382 APLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQ 441
L G + ++I +YM +G L L+ E + G A G+ +L +
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN- 167
Query: 442 PPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF-VNGDLGEFGYIAPEYSSTM 500
++H+++ + ILV+ + ++ DFGL++++ E+++ +G + APE S
Sbjct: 168 --YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 501 VASLKGDVYGIGVVLLELAGF 521
+ DV+ G+V+ E+ +
Sbjct: 226 KFTSASDVWSFGIVMWEVMTY 246
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 13/172 (7%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K++ + + K F E+ +L ++ HPN+ L G C+ L+ +Y G+LY++L
Sbjct: 34 VAIKQIES-ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL 90
Query: 411 QGNATELDWPTRFRI---GLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDARIMD 466
G A L + T L ++G+A+LH +H+++ N++LV +I D
Sbjct: 91 HG-AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 149
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
FG T+ D + + + G ++APE S K DV+ G++L E+
Sbjct: 150 FG-----TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 196
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 87/172 (50%), Gaps = 13/172 (7%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K++ + + K F E+ +L ++ HPN+ L G C+ L+ +Y G+LY++L
Sbjct: 35 VAIKQIES-ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVL 91
Query: 411 QGNATELDWPTRFRI---GLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDARIMD 466
G A L + T L ++G+A+LH +H+++ N++LV +I D
Sbjct: 92 HG-AEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICD 150
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
FG T+ D + + + G ++APE S K DV+ G++L E+
Sbjct: 151 FG-----TACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEV 197
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 18/229 (7%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYC--VVEEEKLLIYKYMSSGTLY 407
VL V+ +T K + F E RL HPN+ P+LG C LI +M G+LY
Sbjct: 40 VLKVRDWSTRK--SRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLY 97
Query: 408 SLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
++L +G +D + L ARG+A+L H +P + S +++DED ARI
Sbjct: 98 NVLHEGTNFVVDQSQAVKFALDMARGMAFL-HTLEPLIPRHALNSRSVMIDEDMTARI-- 154
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLK---GDVYGIGVVLLELAGFKG 523
+A + S G + ++APE D++ V+L EL +
Sbjct: 155 -SMADVKFSFQSP----GRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREV 209
Query: 524 NLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC-VVSRPK 571
D N + E + + G + + +K+ N RPK
Sbjct: 210 PFADLSNMEIGMKVALEGL-RPTIPPGISPHVSKLMKICMNEDPAKRPK 257
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 85/201 (42%), Gaps = 20/201 (9%)
Query: 336 RTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGY----CVVE 391
R G +KA L + V AVK + E+ ++H NL + +E
Sbjct: 27 RFGCVWKAQLMNDFV-AVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNLE 85
Query: 392 EEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHH--------GCQPP 443
E LI + G+L L+GN + W + +RGL++LH G +P
Sbjct: 86 VELWLITAFHDKGSLTDYLKGNI--ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 444 FLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMV-- 501
H++ S +L+ D A + DFGLA +G +G Y+APE +
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINF 203
Query: 502 ---ASLKGDVYGIGVVLLELA 519
A L+ D+Y +G+VL EL
Sbjct: 204 QRDAFLRIDMYAMGLVLWELV 224
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 21/163 (12%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK---LLIYKYMSSGTLYSLLQGNA-----T 415
K+F E++ QL H N+ ++ V+EE L+ +Y+ TL ++ + T
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMID---VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDT 112
Query: 416 ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475
+++ + G+ A + +H +P QNI L+D + +I DFG+AK ++
Sbjct: 113 AINFTNQILDGIKHAHDMRIVHRDIKP----QNI-----LIDSNKTLKIFDFGIAKALSE 163
Query: 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + N LG Y +PE + D+Y IG+VL E+
Sbjct: 164 TSLTQ-TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEM 205
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRF 423
+ F +E + +GQ HPN+ L G + ++I +YM +G+L + L+ N
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 119
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVN 483
+ G G+ +L ++H+++ + ILV+ + ++ DFG+++++ E+++
Sbjct: 120 GMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
Query: 484 -GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
G + APE + + DV+ G+V+ E+ +
Sbjct: 177 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 215
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRF 423
+ F +E + +GQ HPN+ L G + ++I +YM +G+L + L+ N
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 113
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVN 483
+ G G+ +L ++H+++ + ILV+ + ++ DFG+++++ E+++
Sbjct: 114 GMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
Query: 484 -GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
G + APE + + DV+ G+V+ E+ +
Sbjct: 171 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 209
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 26/182 (14%)
Query: 363 EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQG-------NAT 415
+ F+ E + + +PN+ LLG C V + L+++YM+ G L L+ + +
Sbjct: 94 QADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLS 153
Query: 416 ELDWPTRFR----------------IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
D TR R I A G+A+L + F+H+++ + LV E+
Sbjct: 154 HSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGEN 210
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
+I DFGL++ + S+D D ++ PE + + DV+ GVVL E+
Sbjct: 211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIF 270
Query: 520 GF 521
+
Sbjct: 271 SY 272
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 97/212 (45%), Gaps = 37/212 (17%)
Query: 336 RTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMN--RLGQLRHPNLAPLLGYCVVEE- 392
R G YK L D +AVK + + F NE N R+ + H N+A + V +E
Sbjct: 25 RYGAVYKGSL-DERPVAVKVFSFA--NRQNFINEKNIYRVPLMEHDNIA---RFIVGDER 78
Query: 393 -------EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH------HG 439
E LL+ +Y +G+L L + + DW + R+ RGLA+LH
Sbjct: 79 VTADGRMEYLLVMEYYPNGSLXKYLSLHTS--DWVSSCRLAHSVTRGLAYLHTELPRGDH 136
Query: 440 CQPPFLHQNICSNVILVDEDFDARIMDFGLA------KLMTSSDESSFVNGDLGEFGYIA 493
+P H+++ S +LV D I DFGL+ +L+ +E + ++G Y+A
Sbjct: 137 YKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196
Query: 494 PEYSSTMV------ASLKG-DVYGIGVVLLEL 518
PE V ++LK D+Y +G++ E+
Sbjct: 197 PEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 39 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 97
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
M +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 98 XMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 154
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 519 AGF 521
+
Sbjct: 215 MSY 217
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 78/159 (49%), Gaps = 4/159 (2%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRF 423
+ F +E + +GQ HPN+ L G +++ +YM +G+L + L+ + +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF-V 482
+ G G+ +L ++H+++ + +LVD + ++ DFGL++++ ++++
Sbjct: 155 GMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTT 211
Query: 483 NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
G + APE + S DV+ GVV+ E+ +
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 349 SVLAVKRLN--TCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
S +A+K L + ++F +E + +GQ HPN+ L G +++ ++M +G L
Sbjct: 45 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 104
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
S L+ N + + G A G+ +L + ++H+++ + ILV+ + ++ D
Sbjct: 105 DSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSD 161
Query: 467 FGLAKLM--TSSD--ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
FGL++ + SSD E+S + G + + APE + + D + G+V+ E+ F
Sbjct: 162 FGLSRFLEENSSDPTETSSLGGKI-PIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSF 219
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
M +G+L S L+ + + + G A G+ +L ++H+++ + IL++ +
Sbjct: 127 XMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSN 183
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 519 AGF 521
+
Sbjct: 244 MSY 246
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 83/178 (46%), Gaps = 8/178 (4%)
Query: 349 SVLAVKRLN--TCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
S +A+K L + ++F +E + +GQ HPN+ L G +++ ++M +G L
Sbjct: 43 SCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL 102
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
S L+ N + + G A G+ +L + ++H+++ + ILV+ + ++ D
Sbjct: 103 DSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSD 159
Query: 467 FGLAKLMTSSDESSFVNGDLG---EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
FGL++ + + LG + APE + + D + G+V+ E+ F
Sbjct: 160 FGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSF 217
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 84/180 (46%), Gaps = 11/180 (6%)
Query: 348 GSVLAVKRLNTCKLGEKK-FRNEMNRLGQLRHPNLAPLLG--YCVVEEEKLLIYKYMSSG 404
G+++AVK+L +++ F+ E+ L L + G Y E L+ +Y+ SG
Sbjct: 36 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSG 95
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDAR 463
L LQ + LD +G+ +L C +H+++ + ILV+ + +
Sbjct: 96 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVK 151
Query: 464 IMDFGLAKLMTSSDESSFVN--GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
I DFGLAKL+ + V G F Y APE S + S + DV+ GVVL EL +
Sbjct: 152 IADFGLAKLLPLDKDXXVVREPGQSPIFWY-APESLSDNIFSRQSDVWSFGVVLYELFTY 210
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 4/159 (2%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRF 423
+ F +E + +GQ HPN+ L G +++ +YM +G+L + L+ + +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLV 154
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS-DESSFV 482
+ G G+ +L ++H+++ + +LVD + ++ DFGL++++ D +
Sbjct: 155 GMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTT 211
Query: 483 NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
G + APE + S DV+ GVV+ E+ +
Sbjct: 212 TGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 81/176 (46%), Gaps = 8/176 (4%)
Query: 351 LAVKRLNT--CKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K L + + + F +E + +GQ HPN+ L G ++I ++M +G+L S
Sbjct: 64 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ N + + G A G+ +L ++H+++ + ILV+ + ++ DFG
Sbjct: 124 FLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFG 180
Query: 469 LAKLMTSSDESSFVNGDLG---EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
L++ + LG + APE + DV+ G+V+ E+ +
Sbjct: 181 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 236
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 110/260 (42%), Gaps = 29/260 (11%)
Query: 347 DGSVLAVKRLNTCKLGEKK-FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
D ++AVK L L +K F+ E L L+H ++ G C + +++++YM G
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 406 LYSLLQGNAT---------------ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNIC 450
L L+ + EL I A G+ +L F+H+++
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLA 160
Query: 451 SNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYG 510
+ LV + +I DFG+++ + S+D + ++ PE + + DV+
Sbjct: 161 TRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWS 220
Query: 511 IGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEIL---QFLKVACNCVV 567
GV+L E+ F W QLS++ E I+ G+ + + + V C
Sbjct: 221 FGVILWEI--FTYGKQPWF-QLSNT----EVIECITQGRVLERPRVCPKEVYDVMLGCWQ 273
Query: 568 SRPKDRWSMYQVYQSLNSIA 587
P+ R ++ ++Y+ L+++
Sbjct: 274 REPQQRLNIKEIYKILHALG 293
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 77/159 (48%), Gaps = 4/159 (2%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRF 423
+ F +E + +GQ HPN+ L G + ++I +YM +G+L + L+ N
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 134
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVN 483
+ G G+ +L +H+++ + ILV+ + ++ DFG+++++ E+++
Sbjct: 135 GMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
Query: 484 -GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
G + APE + + DV+ G+V+ E+ +
Sbjct: 192 RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSY 230
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 330 NVIISTRTGTTYKAM-LPDGSVL----AVKRLN--TCKLGEKKFRNEMNRLGQLRHPNLA 382
V+ S GT YK + +P+G + A+K LN T +F +E + + HP+L
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 80
Query: 383 PLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQP 442
LLG C+ +L + + M G L + + + + A+G+ +L +
Sbjct: 81 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ER 136
Query: 443 PFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVA 502
+H+++ + +LV +I DFGLA+L+ ++ +G ++A E
Sbjct: 137 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 196
Query: 503 SLKGDVYGIGVVLLELAGFKGNLVD 527
+ + DV+ GV + EL F G D
Sbjct: 197 THQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 348 GSVLAVKRLNTCKLGEKK-FRNEMNRLGQLRHPNLAPLLG--YCVVEEEKLLIYKYMSSG 404
G+++AVK+L +++ F+ E+ L L + G Y + L+ +Y+ SG
Sbjct: 39 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 98
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDAR 463
L LQ + LD +G+ +L C +H+++ + ILV+ + +
Sbjct: 99 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVK 154
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGE--FGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
I DFGLAKL+ D+ +V + G+ + APE S + S + DV+ GVVL EL
Sbjct: 155 IADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 210
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 92/205 (44%), Gaps = 11/205 (5%)
Query: 330 NVIISTRTGTTYKAM-LPDGSVL----AVKRLN--TCKLGEKKFRNEMNRLGQLRHPNLA 382
V+ S GT YK + +P+G + A+K LN T +F +E + + HP+L
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 383 PLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQP 442
LLG C+ +L + + M G L + + + + A+G+ +L +
Sbjct: 104 RLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLE---ER 159
Query: 443 PFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVA 502
+H+++ + +LV +I DFGLA+L+ ++ +G ++A E
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKF 219
Query: 503 SLKGDVYGIGVVLLELAGFKGNLVD 527
+ + DV+ GV + EL F G D
Sbjct: 220 THQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 348 GSVLAVKRLNTCKLGEKK-FRNEMNRLGQLRHPNLAPLLG--YCVVEEEKLLIYKYMSSG 404
G+++AVK+L +++ F+ E+ L L + G Y + L+ +Y+ SG
Sbjct: 52 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 111
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDAR 463
L LQ + LD +G+ +L C +H+++ + ILV+ + +
Sbjct: 112 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVK 167
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGE--FGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
I DFGLAKL+ D+ +V + G+ + APE S + S + DV+ GVVL EL
Sbjct: 168 IADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 223
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 80/176 (45%), Gaps = 8/176 (4%)
Query: 351 LAVKRLNT--CKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K L + + + F +E + +GQ HPN+ L G ++I ++M +G+L S
Sbjct: 38 VAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
L+ N + + G A G+ +L ++H+ + + ILV+ + ++ DFG
Sbjct: 98 FLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFG 154
Query: 469 LAKLMTSSDESSFVNGDLG---EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
L++ + LG + APE + DV+ G+V+ E+ +
Sbjct: 155 LSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSY 210
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 348 GSVLAVKRLNTCKLGEKK-FRNEMNRLGQLRHPNLAPLLG--YCVVEEEKLLIYKYMSSG 404
G+++AVK+L +++ F+ E+ L L + G Y + L+ +Y+ SG
Sbjct: 40 GALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSG 99
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDAR 463
L LQ + LD +G+ +L C +H+++ + ILV+ + +
Sbjct: 100 CLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRC----VHRDLAARNILVESEAHVK 155
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGE--FGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
I DFGLAKL+ D+ +V + G+ + APE S + S + DV+ GVVL EL
Sbjct: 156 IADFGLAKLLP-LDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYEL 211
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 87/183 (47%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG-----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP ++V + T K+G + F E + +GQ HPN+ L G + +++ +
Sbjct: 68 LPSKKEISVA-IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
M +G+L S L+ + + + G A G+ +L +H+++ + IL++ +
Sbjct: 127 XMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGA---VHRDLAARNILINSN 183
Query: 460 FDARIMDFGLAKLMTSSDESSFVN-GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+++ G + +PE + + DV+ G+VL E+
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 519 AGF 521
+
Sbjct: 244 MSY 246
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 88/200 (44%), Gaps = 26/200 (13%)
Query: 349 SVLAVKRL--NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
+ +AVK L N + +E N L Q+ HP++ L G C + LLI +Y G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 407 YSLLQGN---------------ATELDWPTRFRIGLGAARGLAW-----LHHGCQPPFLH 446
L+ + ++ LD P + +G AW + + + +H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 447 QNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEF--GYIAPEYSSTMVASL 504
+++ + ILV E +I DFGL++ +E S+V G ++A E + +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSR--DVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 505 KGDVYGIGVVLLELAGFKGN 524
+ DV+ GV+L E+ GN
Sbjct: 232 QSDVWSFGVLLWEIVTLGGN 251
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 348 GSVLAVKRLNTCKLGE----KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AVK LN K+ K + E+ L RHP++ L + ++ +Y+S
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G L+ + G E++ F+ L A + + H + +H+++ +L+D +
Sbjct: 96 GELFDYICKHGRVEEMEARRLFQQILSA---VDYCH---RHMVVHRDLKPENVLLDAHMN 149
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY-SSTMVASLKGDVYGIGVVLLEL 518
A+I DFGL+ +M+ + F+ G Y APE S + A + D++ GV+L L
Sbjct: 150 AKIADFGLSNMMS---DGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 16/178 (8%)
Query: 348 GSVLAVKRLNTCKLGE----KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AVK LN K+ K + E+ L RHP++ L + ++ +Y+S
Sbjct: 36 GHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G L+ + G E++ F+ L A + + H + +H+++ +L+D +
Sbjct: 96 GELFDYICKHGRVEEMEARRLFQQILSA---VDYCH---RHMVVHRDLKPENVLLDAHMN 149
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY-SSTMVASLKGDVYGIGVVLLEL 518
A+I DFGL+ +M+ + F+ G Y APE S + A + D++ GV+L L
Sbjct: 150 AKIADFGLSNMMS---DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL 204
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 36/245 (14%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397
G + A + +AVK + + + F E N + L+H L L V +E +I
Sbjct: 196 GEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTKEPIYII 254
Query: 398 YKYMSSGTLYSLLQGN-ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456
++M+ G+L L+ + ++ P A G+A++ Q ++H+++ + ILV
Sbjct: 255 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILV 311
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
+I DFGLA++ G + APE + ++K DV+ G++L+
Sbjct: 312 SASLVCKIADFGLARV-----------GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLM 360
Query: 517 ELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY--------DEEILQFLKVACNCVVS 568
E+ + ++ G S + +AL +GY EE+ + C +
Sbjct: 361 EIVTY--------GRIPYPGMSNPEVIRAL-ERGYRMPRPENCPEELYNIM---MRCWKN 408
Query: 569 RPKDR 573
RP++R
Sbjct: 409 RPEER 413
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ LAV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 34 MSPENPALAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 91
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 92 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSS 148
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ ++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 149 NDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEI 207
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ LAV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 32 MSPENPALAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 89
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 90 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS 146
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ ++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 147 NDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ LAV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 37 MSPENPALAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 94
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 95 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSS 151
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ ++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 152 NDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEI 210
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ LAV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 35 MSPENPALAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 92
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 93 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSS 149
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ ++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 150 NDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEI 208
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ +AV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 32 MSPENPAMAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 89
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 90 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS 146
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ ++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 147 NDCVKLGDFGLSRYMEDSTXXKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ LAV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 29 MSPENPALAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 86
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 87 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS 143
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ ++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 144 NDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEI 202
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ LAV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 60 MSPENPALAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 117
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 118 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSS 174
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ ++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 175 NDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEI 233
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 345 LPDGSVLAVKRLNTCKLG--EKKFRN---EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399
LP +AV + T K+G EK+ R+ E + +GQ HPN+ L G + +++ +
Sbjct: 66 LPGKRDVAVA-IKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIE 124
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
+M +G L + L+ + + + G A G+ +L ++H+++ + ILV+ +
Sbjct: 125 FMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSN 181
Query: 460 FDARIMDFGLAKLMTSSDESSF-VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++++ E+ + G + APE + DV+ G+V+ E+
Sbjct: 182 LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEV 241
Query: 519 AGF 521
+
Sbjct: 242 MSY 244
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ +AV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 32 MSPENPAMAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 89
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 90 ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSS 146
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ ++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 147 NDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 74/168 (44%), Gaps = 4/168 (2%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E +F E + L H L L G C + +I +YM++G L + L
Sbjct: 51 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ + + +L FLH+++ + LV++ ++ DFGL+
Sbjct: 111 REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + +E+S V G + PE S K D++ GV++ E+
Sbjct: 168 RYVLDDEETSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 26/200 (13%)
Query: 349 SVLAVKRL--NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
+ +AVK L N + +E N L Q+ HP++ L G C + LLI +Y G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 407 YSLLQGN---------------ATELDWPTRFRIGLGAARGLAW-----LHHGCQPPFLH 446
L+ + ++ LD P + +G AW + + + +H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVH 173
Query: 447 QNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEF--GYIAPEYSSTMVASL 504
+++ + ILV E +I DFGL++ +E S V G ++A E + +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSR--DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 505 KGDVYGIGVVLLELAGFKGN 524
+ DV+ GV+L E+ GN
Sbjct: 232 QSDVWSFGVLLWEIVTLGGN 251
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 26/200 (13%)
Query: 349 SVLAVKRL--NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
+ +AVK L N + +E N L Q+ HP++ L G C + LLI +Y G+L
Sbjct: 54 TTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
Query: 407 YSLLQGN---------------ATELDWPTRFRIGLGAARGLAW-----LHHGCQPPFLH 446
L+ + ++ LD P + +G AW + + + +H
Sbjct: 114 RGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVH 173
Query: 447 QNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEF--GYIAPEYSSTMVASL 504
+++ + ILV E +I DFGL++ +E S V G ++A E + +
Sbjct: 174 RDLAARNILVAEGRKMKISDFGLSR--DVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTT 231
Query: 505 KGDVYGIGVVLLELAGFKGN 524
+ DV+ GV+L E+ GN
Sbjct: 232 QSDVWSFGVLLWEIVTLGGN 251
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 110/234 (47%), Gaps = 21/234 (8%)
Query: 347 DGSVLAVKRLN-TCKLGEKKFRN---EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMS 402
+ V+A+K+++ + K +K+++ E+ L +LRHPN G + E L+ +Y
Sbjct: 78 NSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY-C 136
Query: 403 SGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDA 462
G+ LL+ + L + GA +GLA+LH +H+++ + IL+ E
Sbjct: 137 LGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLV 193
Query: 463 RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL---KGDVYGIGVVLLELA 519
++ DFG A +M + N +G ++APE M K DV+ +G+ +ELA
Sbjct: 194 KLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDR 573
K L + +N +S+ + AL + E F+ +C+ P+DR
Sbjct: 248 ERKPPLFN-MNAMSALYHIAQNESPALQSGHWSEYFRNFVD---SCLQKIPQDR 297
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 22/244 (9%)
Query: 338 GTTYKAM-LPDGSVLAVKRLN-TCKLGEKKFRN---EMNRLGQLRHPNLAPLLGYCVVEE 392
G Y A + + V+A+K+++ + K +K+++ E+ L +LRHPN G + E
Sbjct: 29 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH 88
Query: 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
L+ +Y G+ LL+ + L + GA +GLA+LH +H+++ +
Sbjct: 89 TAWLVMEY-CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAG 144
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL---KGDVY 509
IL+ E ++ DFG A +M + N +G ++APE M K DV+
Sbjct: 145 NILLSEPGLVKLGDFGSASIMAPA------NXFVGTPYWMAPEVILAMDEGQYDGKVDVW 198
Query: 510 GIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSR 569
+G+ +ELA K L + +N +S+ + AL + E F+ +C+
Sbjct: 199 SLGITCIELAERKPPLFN-MNAMSALYHIAQNESPALQSGHWSEYFRNFVD---SCLQKI 254
Query: 570 PKDR 573
P+DR
Sbjct: 255 PQDR 258
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ +AV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 412 MSPENPAMAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 469
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 470 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSS 526
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ ++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 527 NDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEI 585
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 21 ETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 80
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 140 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ +AV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 32 MSPENPAMAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 89
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 90 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSA 146
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 147 TDCVKLGDFGLSRYMEDSTYYKASKGKL-PIKWMAPESINFRRFTSASDVWMFGVCMWEI 205
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 13/178 (7%)
Query: 346 PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEEEKLLIYKYM 401
P G ++A K ++ + RN++ R Q+ H P + G + E + ++M
Sbjct: 39 PSGLIMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 96
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G+L +L+ A + ++ + RGLA+L Q +H+++ + ILV+ +
Sbjct: 97 DGGSLDQVLK-EAKRIPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGE 153
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
++ DFG++ + S +SFV G Y+APE S++ D++ +G+ L+ELA
Sbjct: 154 IKLCDFGVSGQLIDSMANSFV----GTRSYMAPERLQGTHYSVQSDIWSMGLSLVELA 207
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 348 GSVLAVKRLNTCKLGEK--KFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSS 403
G +AVK L G + E+ L L H N+ G C + LI +++ S
Sbjct: 50 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 109
Query: 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463
G+L L N +++ + + + +G+ +L G + ++H+++ + +LV+ + +
Sbjct: 110 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL--GSRQ-YVHRDLAARNVLVESEHQVK 166
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGE--FGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
I DFGL K + + E V D F Y APE + DV+ GV L EL +
Sbjct: 167 IGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLTY 225
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 14 ETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 73
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 133 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 348 GSVLAVKRLNTCKLGEK--KFRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSS 403
G +AVK L G + E+ L L H N+ G C + LI +++ S
Sbjct: 38 GEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPS 97
Query: 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463
G+L L N +++ + + + +G+ +L G + ++H+++ + +LV+ + +
Sbjct: 98 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL--GSRQ-YVHRDLAARNVLVESEHQVK 154
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGE--FGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
I DFGL K + + E V D F Y APE + DV+ GV L EL +
Sbjct: 155 IGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APECLMQSKFYIASDVWSFGVTLHELLTY 213
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 21 ETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 80
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 140 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 36/267 (13%)
Query: 344 MLP--DGSVLAVKRLNTCKLGEKK-FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400
+LP D ++AVK L ++ F+ E L L+H ++ G C L++++Y
Sbjct: 65 LLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 124
Query: 401 MSSGTLYSLLQGNATELDWPTRFR------IGLG--------AARGLAWLHHGCQPPFLH 446
M G L L+ + + +GLG A G+ +L F+H
Sbjct: 125 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVH 181
Query: 447 QNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKG 506
+++ + LV + +I DFG+++ + S+D + ++ PE + +
Sbjct: 182 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 241
Query: 507 DVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDE------EILQFLK 560
DV+ GVVL E+ F W QLS++ EAID G+ + E+ ++
Sbjct: 242 DVWSFGVVLWEI--FTYGKQPWY-QLSNT----EAIDCITQGRELERPRACPPEVYAIMR 294
Query: 561 VACNCVVSRPKDRWSMYQVYQSLNSIA 587
C P+ R S+ V+ L ++A
Sbjct: 295 ---GCWQREPQQRHSIKDVHARLQALA 318
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 11/197 (5%)
Query: 338 GTTYKAM-LPDGS------VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVV 390
GT YK + +PDG + V R NT K+ +E + + P ++ LLG C+
Sbjct: 31 GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLT 90
Query: 391 EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNIC 450
+L + + M G L ++ N L + A+G+++L +H+++
Sbjct: 91 STVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRDLA 146
Query: 451 SNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYG 510
+ +LV +I DFGLA+L+ + +G ++A E + + DV+
Sbjct: 147 ARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWS 206
Query: 511 IGVVLLELAGFKGNLVD 527
GV + EL F D
Sbjct: 207 YGVTVWELMTFGAKPYD 223
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 75
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 135 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGF 521
+ + + DV+ GV + EL F
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTF 217
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 114/267 (42%), Gaps = 36/267 (13%)
Query: 344 MLP--DGSVLAVKRLNTCKLGEKK-FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400
+LP D ++AVK L ++ F+ E L L+H ++ G C L++++Y
Sbjct: 42 LLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 101
Query: 401 MSSGTLYSLLQGNATELDWPTRFR------IGLG--------AARGLAWLHHGCQPPFLH 446
M G L L+ + + +GLG A G+ +L G F+H
Sbjct: 102 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGLH--FVH 158
Query: 447 QNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKG 506
+++ + LV + +I DFG+++ + S+D + ++ PE + +
Sbjct: 159 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 218
Query: 507 DVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDE------EILQFLK 560
DV+ GVVL E+ F W QLS++ EAID G+ + E+ ++
Sbjct: 219 DVWSFGVVLWEI--FTYGKQPWY-QLSNT----EAIDCITQGRELERPRACPPEVYAIMR 271
Query: 561 VACNCVVSRPKDRWSMYQVYQSLNSIA 587
C P+ R S+ V+ L ++A
Sbjct: 272 ---GCWQREPQQRHSIKDVHARLQALA 295
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 15 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 74
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 75 VDNPHVCRLLGICLTSTVQL-IMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 134 LEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 24/224 (10%)
Query: 315 KLADLMAASNSFCSENVIISTRTGTTYKAML--PDGSVL--AVKRL---NTCKLGEKKFR 367
KL D++ N ++ G+ + L DG+ L AVK + N+ + ++F
Sbjct: 25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFL 84
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEK-----LLIYKYMSSGTL-----YSLLQGNATEL 417
+E + HPN+ LLG C+ + ++I +M G L YS L+ +
Sbjct: 85 SEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHI 144
Query: 418 DWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477
T + + A G+ +L + FLH+++ + ++ +D + DFGL+K + S D
Sbjct: 145 PLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
Query: 478 ESSFVNGDLGEF--GYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
+ G + + +IA E + V + K DV+ GV + E+A
Sbjct: 202 --YYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 36/267 (13%)
Query: 344 MLP--DGSVLAVKRLNTCKLGEKK-FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400
+LP D ++AVK L ++ F+ E L L+H ++ G C L++++Y
Sbjct: 36 LLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEY 95
Query: 401 MSSGTLYSLLQGNATELDWPTRFR------IGLG--------AARGLAWLHHGCQPPFLH 446
M G L L+ + + +GLG A G+ +L F+H
Sbjct: 96 MRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVH 152
Query: 447 QNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKG 506
+++ + LV + +I DFG+++ + S+D + ++ PE + +
Sbjct: 153 RDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 212
Query: 507 DVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDE------EILQFLK 560
DV+ GVVL E+ F W QLS++ EAID G+ + E+ ++
Sbjct: 213 DVWSFGVVLWEI--FTYGKQPWY-QLSNT----EAIDCITQGRELERPRACPPEVYAIMR 265
Query: 561 VACNCVVSRPKDRWSMYQVYQSLNSIA 587
C P+ R S+ V+ L ++A
Sbjct: 266 ---GCWQREPQQRHSIKDVHARLQALA 289
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 18 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 77
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 78 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 137 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 337 TGTTYKAM-LPDGSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEK 394
+GT Y AM + G +A++++N + +K+ NE+ + + ++PN+ L +V +E
Sbjct: 34 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 93
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ +Y++ G+L ++ T +D + + L +LH +H+NI S+ I
Sbjct: 94 WVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRNIKSDNI 148
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
L+ D ++ DFG +T E S + +G ++APE + K D++ +G++
Sbjct: 149 LLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 206
Query: 515 LLEL 518
+E+
Sbjct: 207 AIEM 210
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 76
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 136 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGF 521
+ + + DV+ GV + EL F
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 15 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 74
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 75 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 134 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 73
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 133 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGF 521
+ + + DV+ GV + EL F
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 73
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 133 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 73
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 133 LEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 24 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 83
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 84 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 143 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 23/212 (10%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 73
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQ------GNATELDWPTRFRIGLGA 429
+ +P++ LLG C+ +L I + M G L ++ G+ L+W +
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 126
Query: 430 ARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEF 489
A+G+ +L +H+++ + +LV +I DFGLAKL+ + ++ G
Sbjct: 127 AKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 183
Query: 490 GYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
++A E + + + DV+ GV + EL F
Sbjct: 184 KWMALESILHRIYTHQSDVWSYGVTVWELMTF 215
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 76
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 136 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGF 521
+ + + DV+ GV + EL F
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTF 218
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 348 GSVLAVKRLNT-CKLGEKK-FRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSS 403
G ++AVK L C + ++ E++ L L H ++ G C + EK L+ +Y+
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 404 GTLYSLLQGNATELDWPTRFRIGLGA--------ARGLAWLHHGCQPPFLHQNICSNVIL 455
G+L D+ R IGL G+A+LH ++H+N+ + +L
Sbjct: 103 GSL----------RDYLPRHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVL 149
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFV--NGDLGEFGYIAPEYSSTMVASLKGDVYGIGV 513
+D D +I DFGLAK + E V +GD F Y APE DV+ GV
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGV 208
Query: 514 VLLEL 518
L EL
Sbjct: 209 TLYEL 213
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 76
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 136 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 11/180 (6%)
Query: 344 MLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
M P+ +AV + TCK +KF E + Q HP++ L+G + E +I
Sbjct: 412 MSPENPAMAVA-IKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIG-VITENPVWIIM 469
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ + G L S LQ LD + + LA+L F+H++I + +LV
Sbjct: 470 ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSA 526
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ DFGL++ M S G L ++APE + + DV+ GV + E+
Sbjct: 527 TDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESINFRRFTSASDVWMFGVCMWEI 585
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 366 FR-NEMNRLGQLRHPNLAPLLGYCVVEEEK----LLIYKYMSSGTLYSLLQGNATELDWP 420
FR E+ LRH N+ + + LI Y G+LY LQ T LD
Sbjct: 48 FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTV 105
Query: 421 TRFRIGLGAARGLAWLH---HGCQ--PPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475
+ RI L A GLA LH G Q P H+++ S ILV ++ I D GLA + +
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 476 SDESSFV--NGDLGEFGYIAPEYSSTMV------ASLKGDVYGIGVVLLELA 519
S V N +G Y+APE + + + D++ G+VL E+A
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 76
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 77 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 136 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 91/206 (44%), Gaps = 11/206 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 8 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 67
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 68 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 127 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 183
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGF 521
+ + + DV+ GV + EL F
Sbjct: 184 SILHRIYTHQSDVWSYGVTVWELMTF 209
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 75
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 135 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 21 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 80
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 140 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 39 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 98
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 99 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 158 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 366 FR-NEMNRLGQLRHPNLAPLLGYCVVEEEK----LLIYKYMSSGTLYSLLQGNATELDWP 420
FR E+ LRH N+ + + LI Y G+LY LQ T LD
Sbjct: 48 FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTV 105
Query: 421 TRFRIGLGAARGLAWLH---HGCQ--PPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475
+ RI L A GLA LH G Q P H+++ S ILV ++ I D GLA + +
Sbjct: 106 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 165
Query: 476 SDESSFV--NGDLGEFGYIAPEYSSTMV------ASLKGDVYGIGVVLLELA 519
S V N +G Y+APE + + + D++ G+VL E+A
Sbjct: 166 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 20 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 79
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 80 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 139 LE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 76/172 (44%), Gaps = 20/172 (11%)
Query: 366 FR-NEMNRLGQLRHPNLAPLLGYCVVEEEK----LLIYKYMSSGTLYSLLQGNATELDWP 420
FR E+ LRH N+ + + LI Y G+LY LQ T LD
Sbjct: 77 FRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ--LTTLDTV 134
Query: 421 TRFRIGLGAARGLAWLH---HGCQ--PPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475
+ RI L A GLA LH G Q P H+++ S ILV ++ I D GLA + +
Sbjct: 135 SCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQ 194
Query: 476 SDESSFV--NGDLGEFGYIAPEYSSTMV------ASLKGDVYGIGVVLLELA 519
S V N +G Y+APE + + + D++ G+VL E+A
Sbjct: 195 STNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA 246
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 25/183 (13%)
Query: 348 GSVLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +A+K ++ +L +K FR E+ + L HPN+ L E+ LI +Y S
Sbjct: 37 GREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 95
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G ++ L G E + ++FR + A + + H Q +H+++ + +L+D D +
Sbjct: 96 GEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCH---QKRIVHRDLKAENLLLDADMN 149
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEF----GYIAPE-YSSTMVASLKGDVYGIGVVLL 516
+I DFG + T V G L F Y APE + + DV+ +GV+L
Sbjct: 150 IKIADFGFSNEFT-------VGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 202
Query: 517 ELA 519
L
Sbjct: 203 TLV 205
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 28/185 (15%)
Query: 348 GSVLAVKRLNT-CKLGEKK-FRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSS 403
G ++AVK L C + ++ E++ L L H ++ G C + EK L+ +Y+
Sbjct: 43 GEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPL 102
Query: 404 GTLYSLLQGNATELDWPTRFRIGLGA--------ARGLAWLHHGCQPPFLHQNICSNVIL 455
G+L D+ R IGL G+A+LH ++H+N+ + +L
Sbjct: 103 GSL----------RDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVL 149
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFV--NGDLGEFGYIAPEYSSTMVASLKGDVYGIGV 513
+D D +I DFGLAK + E V +GD F Y APE DV+ GV
Sbjct: 150 LDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGV 208
Query: 514 VLLEL 518
L EL
Sbjct: 209 TLYEL 213
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L +C ++EKL Y +G L ++ + + TRF
Sbjct: 86 RERDVMSRLDHPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 144
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 145 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 200
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 201 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 234
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 348 GSVLAVKRLNTCKLGEK----KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +A+K +N L + + E++ L LRHP++ L ++E +++ +Y +
Sbjct: 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 97
Query: 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463
++Q + RF + +A H +H+++ +L+DE + +
Sbjct: 98 ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK-----IVHRDLKPENLLLDEHLNVK 152
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY-SSTMVASLKGDVYGIGVVL 515
I DFGL+ +MT + +F+ G Y APE S + A + DV+ GV+L
Sbjct: 153 IADFGLSNIMT---DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 202
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 348 GSVLAVKRLNTCKLGEK----KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +A+K +N L + + E++ L LRHP++ L ++E +++ +Y +
Sbjct: 39 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 98
Query: 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463
++Q + RF + +A H +H+++ +L+DE + +
Sbjct: 99 ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK-----IVHRDLKPENLLLDEHLNVK 153
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY-SSTMVASLKGDVYGIGVVL 515
I DFGL+ +MT + +F+ G Y APE S + A + DV+ GV+L
Sbjct: 154 IADFGLSNIMT---DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 203
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 84/183 (45%), Gaps = 25/183 (13%)
Query: 348 GSVLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +A+K ++ +L +K FR E+ + L HPN+ L E+ LI +Y S
Sbjct: 40 GREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASG 98
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G ++ L G E + ++FR + A + + H Q +H+++ + +L+D D +
Sbjct: 99 GEVFDYLVAHGRMKEKEARSKFRQIVSAVQ---YCH---QKRIVHRDLKAENLLLDADMN 152
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEF----GYIAPE-YSSTMVASLKGDVYGIGVVLL 516
+I DFG + T V G L F Y APE + + DV+ +GV+L
Sbjct: 153 IKIADFGFSNEFT-------VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILY 205
Query: 517 ELA 519
L
Sbjct: 206 TLV 208
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 347 DGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL--IYKYM 401
DG +L K L+ + E + +E+N L +L+HPN+ + L + +Y
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 402 SSGTLYSLLQGNATE---LDWPTRFRIGLGAARGLAWLHHGCQ--PPFLHQNICSNVILV 456
G L S++ E LD R+ L H LH+++ + +
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
D + ++ DFGLA+++ + ++SF +G Y++PE + M + K D++ +G +L
Sbjct: 150 DGKQNVKLGDFGLARIL--NHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 517 ELAGF 521
EL
Sbjct: 208 ELCAL 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 348 GSVLAVKRLNTCKLGEK----KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +A+K +N L + + E++ L LRHP++ L ++E +++ +Y +
Sbjct: 29 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 88
Query: 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463
++Q + RF + +A H +H+++ +L+DE + +
Sbjct: 89 ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK-----IVHRDLKPENLLLDEHLNVK 143
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY-SSTMVASLKGDVYGIGVVL 515
I DFGL+ +MT + +F+ G Y APE S + A + DV+ GV+L
Sbjct: 144 IADFGLSNIMT---DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 193
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 81/173 (46%), Gaps = 13/173 (7%)
Query: 348 GSVLAVKRLNTCKLGEK----KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +A+K +N L + + E++ L LRHP++ L ++E +++ +Y +
Sbjct: 33 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGN 92
Query: 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463
++Q + RF + +A H +H+++ +L+DE + +
Sbjct: 93 ELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHK-----IVHRDLKPENLLLDEHLNVK 147
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY-SSTMVASLKGDVYGIGVVL 515
I DFGL+ +MT + +F+ G Y APE S + A + DV+ GV+L
Sbjct: 148 IADFGLSNIMT---DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVIL 197
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 116/276 (42%), Gaps = 41/276 (14%)
Query: 348 GSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE-------EEKLLIYKY 400
G +AVK T + E+ + +RH N+ LG+ + + LI Y
Sbjct: 60 GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENI---LGFIAADIKGTGSWTQLYLITDY 116
Query: 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGC-----QPPFLHQNICSNVIL 455
+G+LY L+ +T LD + ++ + GL LH +P H+++ S IL
Sbjct: 117 HENGSLYDYLK--STTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNIL 174
Query: 456 VDEDFDARIMDFGLA-KLMTSSDESSF-VNGDLGEFGYIAPEY------SSTMVASLKGD 507
V ++ I D GLA K ++ ++E N +G Y+ PE + + + D
Sbjct: 175 VKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMAD 234
Query: 508 VYGIGVVLLELAG--FKGNLVDW----VNQLSSSGRSKEAIDKALCGK----------GY 551
+Y G++L E+A G +V+ + L S S E + + +C K
Sbjct: 235 MYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSS 294
Query: 552 DEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIA 587
DE + Q K+ C P R + +V ++L ++
Sbjct: 295 DECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMS 330
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 4/168 (2%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E +F E + L H L L G C + +I +YM++G L + L
Sbjct: 36 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 95
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ + + +L FLH+++ + LV++ ++ DFGL+
Sbjct: 96 REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + DE + G + PE S K D++ GV++ E+
Sbjct: 153 RYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E +F E + L H L L G C + +I +YM++G L + L
Sbjct: 51 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ + + +L FLH+++ + LV++ ++ DFGL+
Sbjct: 111 REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + + +S V G + PE S K D++ GV++ E+
Sbjct: 168 RYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E +F E + L H L L G C + +I +YM++G L + L
Sbjct: 35 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 94
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ + + +L FLH+++ + LV++ ++ DFGL+
Sbjct: 95 REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 151
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + + +S V G + PE S K D++ GV++ E+
Sbjct: 152 RYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 198
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 11/206 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 11 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 70
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A G+ +
Sbjct: 71 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFGLAKL+ + ++ G ++A E
Sbjct: 130 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 186
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGF 521
+ + + DV+ GV + EL F
Sbjct: 187 SILHRIYTHQSDVWSYGVTVWELMTF 212
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 23/212 (10%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGSVLAVK------RLNTCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G + + R T K+ +E +
Sbjct: 48 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMAS 107
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQ------GNATELDWPTRFRIGLGA 429
+ +P++ LLG C+ +L I + M G L ++ G+ L+W +
Sbjct: 108 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------ 160
Query: 430 ARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEF 489
A+G+ +L +H+++ + +LV +I DFGLAKL+ + ++ G
Sbjct: 161 AKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPI 217
Query: 490 GYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
++A E + + + DV+ GV + EL F
Sbjct: 218 KWMALESILHRIYTHQSDVWSYGVTVWELMTF 249
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 337 TGTTYKAM-LPDGSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEK 394
+GT Y AM + G +A++++N + +K+ NE+ + + ++PN+ L +V +E
Sbjct: 33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 92
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ +Y++ G+L ++ T +D + + L +LH +H++I S+ I
Sbjct: 93 WVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNI 147
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
L+ D ++ DFG +T E S + +G ++APE + K D++ +G++
Sbjct: 148 LLGMDGSVKLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 515 LLEL 518
+E+
Sbjct: 206 AIEM 209
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 409 LLQGNATELD---------WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E++ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 168
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 169 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 83/185 (44%), Gaps = 12/185 (6%)
Query: 347 DGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL--IYKYM 401
DG +L K L+ + E + +E+N L +L+HPN+ + L + +Y
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 402 SSGTLYSLLQGNATE---LDWPTRFRIGLGAARGLAWLHHGCQ--PPFLHQNICSNVILV 456
G L S++ E LD R+ L H LH+++ + +
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
D + ++ DFGLA+++ + ++SF +G Y++PE + M + K D++ +G +L
Sbjct: 150 DGKQNVKLGDFGLARIL--NHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 517 ELAGF 521
EL
Sbjct: 208 ELCAL 212
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E +F E + L H L L G C + +I +YM++G L + L
Sbjct: 36 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 95
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ + + +L FLH+++ + LV++ ++ DFGL+
Sbjct: 96 REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 152
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + + +S V G + PE S K D++ GV++ E+
Sbjct: 153 RYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 199
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 43 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 102
Query: 409 LLQGNATELD---------WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E++ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 103 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 159
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 160 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 219
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYC--VVEEEKLLIYKYMSSGTLY 407
VL V+ +T K + F E RL HPN+ P+LG C LI + G+LY
Sbjct: 40 VLKVRDWSTRK--SRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLY 97
Query: 408 SLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
++L +G +D + L ARG A+L H +P + S + +DED ARI
Sbjct: 98 NVLHEGTNFVVDQSQAVKFALDXARGXAFL-HTLEPLIPRHALNSRSVXIDEDXTARI 154
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E +F E + L H L L G C + +I +YM++G L + L
Sbjct: 31 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 90
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ + + +L FLH+++ + LV++ ++ DFGL+
Sbjct: 91 REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 147
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + + +S V G + PE S K D++ GV++ E+
Sbjct: 148 RYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 194
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 337 TGTTYKAM-LPDGSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEK 394
+GT Y AM + G +A++++N + +K+ NE+ + + ++PN+ L +V +E
Sbjct: 33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 92
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ +Y++ G+L ++ T +D + + L +LH +H++I S+ I
Sbjct: 93 WVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNI 147
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
L+ D ++ DFG +T E S + +G ++APE + K D++ +G++
Sbjct: 148 LLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 515 LLEL 518
+E+
Sbjct: 206 AIEM 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 337 TGTTYKAM-LPDGSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEK 394
+GT Y AM + G +A++++N + +K+ NE+ + + ++PN+ L +V +E
Sbjct: 33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 92
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ +Y++ G+L ++ T +D + + L +LH +H++I S+ I
Sbjct: 93 WVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNI 147
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
L+ D ++ DFG +T E S + +G ++APE + K D++ +G++
Sbjct: 148 LLGMDGSVKLTDFGFCAQITP--EQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 205
Query: 515 LLEL 518
+E+
Sbjct: 206 AIEM 209
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 27/184 (14%)
Query: 348 GSVLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AV+ ++ +L +K FR E+ + L HPN+ L E+ L+ +Y S
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFL-HQNICSNVILVDEDF 460
G ++ L G E + +FR + A + C F+ H+++ + +L+D D
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-------YCHQKFIVHRDLKAENLLLDADM 150
Query: 461 DARIMDFGLAKLMTSSDESSFVNGDLGEF----GYIAPE-YSSTMVASLKGDVYGIGVVL 515
+ +I DFG S+E +F N L EF Y APE + + DV+ +GV+L
Sbjct: 151 NIKIADFGF------SNEFTFGN-KLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 516 LELA 519
L
Sbjct: 204 YTLV 207
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 94/184 (51%), Gaps = 9/184 (4%)
Query: 337 TGTTYKAM-LPDGSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEK 394
+GT Y AM + G +A++++N + +K+ NE+ + + ++PN+ L +V +E
Sbjct: 34 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDEL 93
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ +Y++ G+L ++ T +D + + L +LH +H++I S+ I
Sbjct: 94 WVVMEYLAGGSLTDVV--TETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNI 148
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
L+ D ++ DFG +T E S + +G ++APE + K D++ +G++
Sbjct: 149 LLGMDGSVKLTDFGFCAQITP--EQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM 206
Query: 515 LLEL 518
+E+
Sbjct: 207 AIEM 210
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 23/187 (12%)
Query: 347 DGSVLAVKRLNTCKLGEKKF---RNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
DG +K +N ++ K+ R E+ L ++HPN+ ++ Y
Sbjct: 48 DGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEG 107
Query: 404 GTLYS--------LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
G L+ L Q + LDW + + L H LH++I S I
Sbjct: 108 GDLFKRINAQKGVLFQEDQI-LDWFVQICLAL---------KHVHDRKILHRDIKSQNIF 157
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
+ +D ++ DFG+A+++ S+ E +G Y++PE + K D++ +G VL
Sbjct: 158 LTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPYNNKSDIWALGCVL 215
Query: 516 LELAGFK 522
EL K
Sbjct: 216 YELCTLK 222
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Query: 351 LAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410
+A+K + + E +F E + L H L L G C + +I +YM++G L + L
Sbjct: 42 VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 101
Query: 411 QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470
+ + + +L FLH+++ + LV++ ++ DFGL+
Sbjct: 102 REMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 158
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + + +S V G + PE S K D++ GV++ E+
Sbjct: 159 RYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 205
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 348 GSVLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AVK ++ +L +K FR E+ + L HPN+ L E+ L+ +Y S
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFL-HQNICSNVILVDEDF 460
G ++ L G E + +FR + A + C F+ H+++ + +L+D D
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-------YCHQKFIVHRDLKAENLLLDADM 150
Query: 461 DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVLLELA 519
+ +I DFG + T ++ ++ G Y APE + + DV+ +GV+L L
Sbjct: 151 NIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTA 139
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 140 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 195
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + AS D++ +G ++ +L
Sbjct: 196 GTAQYVSPELLTEKSASKSSDLWALGCIIYQLVA 229
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 107/251 (42%), Gaps = 7/251 (2%)
Query: 343 AMLPDGSVLAVKRLNTCKLGEKKFR----NEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398
A L DG +A+K++ L + K R E++ L QL HPN+ + + E ++
Sbjct: 52 ACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ +G L +++ + + + + L H +H++I + +
Sbjct: 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA 171
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
++ D GL + +S +++ + +G Y++PE + K D++ +G +L E+
Sbjct: 172 TGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229
Query: 519 AGFKGNLV-DWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMY 577
A + D +N S + ++ L Y EE+ Q + + N + D +Y
Sbjct: 230 AALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVY 289
Query: 578 QVYQSLNSIAA 588
V + +++ A
Sbjct: 290 DVAKRMHACTA 300
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 328 SENVIISTRTGTTYKAMLPDGS-------VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPN 380
S+ VI G Y D + + ++ R+ + E R + G L HPN
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG-LNHPN 83
Query: 381 LAPLLGYCVVEEE-KLLIYKYMSSGTLYSLL---QGNATELDWPTRFRIGLGAARGLAWL 436
+ L+G + E ++ YM G L + Q N T D GL ARG+ +L
Sbjct: 84 VLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL---ISFGLQVARGMEYL 140
Query: 437 HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEF--GYIAP 494
+ F+H+++ + ++DE F ++ DFGLA+ + + S + A
Sbjct: 141 ---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL 197
Query: 495 EYSSTMVASLKGDVYGIGVVLLEL 518
E T + K DV+ GV+L EL
Sbjct: 198 ESLQTYRFTTKSDVWSFGVLLWEL 221
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 363 EKKFRNEMNRLGQLRH----PNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELD 418
EK EM R Q+ H P + L+G C E +L+ + G L+ L G E+
Sbjct: 376 EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIP 434
Query: 419 WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSD 477
+ + G+ +L + F+H+N+ + NV+LV+ + A+I DFGL+K + +D
Sbjct: 435 VSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHY-AKISDFGLSKAL-GAD 489
Query: 478 ESSFVNGDLGEF--GYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
+S + G++ + APE + S + DV+ GV + E +
Sbjct: 490 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 535
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 18 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 77
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 78 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFG AKL+ + ++ G ++A E
Sbjct: 137 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 348 GSVLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AVK ++ +L +K FR E+ + L HPN+ L E+ L+ +Y S
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFL-HQNICSNVILVDEDF 460
G ++ L G E + +FR + A + C F+ H+++ + +L+D D
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-------YCHQKFIVHRDLKAENLLLDADM 150
Query: 461 DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVLLELA 519
+ +I DFG + T ++ ++ G Y APE + + DV+ +GV+L L
Sbjct: 151 NIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 348 GSVLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AVK ++ +L +K FR E+ + L HPN+ L E+ L+ +Y S
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFL-HQNICSNVILVDEDF 460
G ++ L G E + +FR + A + C F+ H+++ + +L+D D
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-------YCHQKFIVHRDLKAENLLLDADM 150
Query: 461 DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVLLELA 519
+ +I DFG + T ++ ++ G Y APE + + DV+ +GV+L L
Sbjct: 151 NIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 75
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFG AKL+ + ++ G ++A E
Sbjct: 135 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 75
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-IMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFG AKL+ + ++ G ++A E
Sbjct: 135 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 18/195 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEK--KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395
G YKA + SVLA ++ K E+ + E++ L HPN+ LL E
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 396 LIYKYMSSGTLYSLLQGNATELDWP-TRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ + G + +++ EL+ P T +I + + L L++ +H+++ + I
Sbjct: 111 ILIEFCAGGAVDAVM----LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 166
Query: 455 LVDEDFDARIMDFGLAKLMTSSDE--SSFVNGDLGEFGYIAPEY-----SSTMVASLKGD 507
L D D ++ DFG++ T + + SF+ G ++APE S K D
Sbjct: 167 LFTLDGDIKLADFGVSAKNTRTIQRRDSFI----GTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 508 VYGIGVVLLELAGFK 522
V+ +G+ L+E+A +
Sbjct: 223 VWSLGITLIEMAEIE 237
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 75
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 76 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFG AKL+ + ++ G ++A E
Sbjct: 135 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 17/179 (9%)
Query: 348 GSVLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AVK ++ +L +K FR E+ + L HPN+ L E+ L+ +Y S
Sbjct: 40 GREVAVKIIDKTQLNPTSLQKLFR-EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASG 98
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G ++ L G E + +FR + A + + H Q +H+++ + +L+D D +
Sbjct: 99 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQ---YCH---QKYIVHRDLKAENLLLDGDMN 152
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVLLELA 519
+I DFG + T ++ ++ G Y APE + + DV+ +GV+L L
Sbjct: 153 IKIADFGFSNEFTVGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 208
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 21 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 80
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 81 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFG AKL+ + ++ G ++A E
Sbjct: 140 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 91/212 (42%), Gaps = 11/212 (5%)
Query: 323 SNSFCSENVIISTRTGTTYKAM-LPDGS----VLAVKRLN--TCKLGEKKFRNEMNRLGQ 375
F V+ S GT YK + +P+G +A+K L T K+ +E +
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMAS 73
Query: 376 LRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAW 435
+ +P++ LLG C+ +L I + M G L ++ + + + A+G+ +
Sbjct: 74 VDNPHVCRLLGICLTSTVQL-ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 436 LHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
L +H+++ + +LV +I DFG AKL+ + ++ G ++A E
Sbjct: 133 LEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 496 YSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
+ + + DV+ GV + EL F D
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 91/196 (46%), Gaps = 19/196 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEK--KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395
G YKA + SVLA ++ K E+ + E++ L HPN+ LL E
Sbjct: 24 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 83
Query: 396 LIYKYMSSGTLYSLLQGNATELDWP-TRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ + G + +++ EL+ P T +I + + L L++ +H+++ + I
Sbjct: 84 ILIEFCAGGAVDAVM----LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 139
Query: 455 LVDEDFDARIMDFGLAKLMTSSD---ESSFVNGDLGEFGYIAPEY-----SSTMVASLKG 506
L D D ++ DFG++ T + SF+ G ++APE S K
Sbjct: 140 LFTLDGDIKLADFGVSAKNTRTXIQRRDSFI----GTPYWMAPEVVMCETSKDRPYDYKA 195
Query: 507 DVYGIGVVLLELAGFK 522
DV+ +G+ L+E+A +
Sbjct: 196 DVWSLGITLIEMAEIE 211
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 363 EKKFRNEMNRLGQLRH----PNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELD 418
EK EM R Q+ H P + L+G C E +L+ + G L+ L G E+
Sbjct: 50 EKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKREEIP 108
Query: 419 WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSD 477
+ + G+ +L + F+H+++ + NV+LV+ + A+I DFGL+K + +D
Sbjct: 109 VSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHY-AKISDFGLSKAL-GAD 163
Query: 478 ESSFVNGDLGEF--GYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
+S + G++ + APE + S + DV+ GV + E +
Sbjct: 164 DSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSY 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 49 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 108
Query: 409 LLQGNATELD---------WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E++ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 109 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 165
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 225
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 370 MNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGA 429
M+ LGQ H N+ LLG C L+I +Y G L + L+ + L+ F I
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 430 ARGLAWLHHGCQP----PFL------HQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479
A LH Q FL H+++ + +L+ A+I DFGLA+ + +D +
Sbjct: 161 ASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSN 219
Query: 480 SFVNGDLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
V G+ ++APE V +++ DV+ G++L E+
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 52 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 111
Query: 409 LLQGNATELD---------WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E++ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 112 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 168
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 169 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 228
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 409 LLQGNATELD---------WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E++ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 162 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 409 LLQGNATELD---------WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E++ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 167
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 91/195 (46%), Gaps = 18/195 (9%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEK--KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395
G YKA + SVLA ++ K E+ + E++ L HPN+ LL E
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 396 LIYKYMSSGTLYSLLQGNATELDWP-TRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ + G + +++ EL+ P T +I + + L L++ +H+++ + I
Sbjct: 111 ILIEFCAGGAVDAVM----LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 166
Query: 455 LVDEDFDARIMDFGLAKLMTSSDE--SSFVNGDLGEFGYIAPEY-----SSTMVASLKGD 507
L D D ++ DFG++ T + SF+ G ++APE S K D
Sbjct: 167 LFTLDGDIKLADFGVSAKNTRXIQRRDSFI----GTPYWMAPEVVMCETSKDRPYDYKAD 222
Query: 508 VYGIGVVLLELAGFK 522
V+ +G+ L+E+A +
Sbjct: 223 VWSLGITLIEMAEIE 237
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 19/180 (10%)
Query: 348 GSVLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AVK ++ +L +K FR E+ L HPN+ L E+ L+ +Y S
Sbjct: 39 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASG 97
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFL-HQNICSNVILVDEDF 460
G ++ L G E + +FR + A + C F+ H+++ + +L+D D
Sbjct: 98 GEVFDYLVAHGRXKEKEARAKFRQIVSAVQ-------YCHQKFIVHRDLKAENLLLDADX 150
Query: 461 DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVLLELA 519
+ +I DFG + T ++ ++ G Y APE + + DV+ +GV+L L
Sbjct: 151 NIKIADFGFSNEFTFGNK---LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 409 LLQGNATELD---------WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E++ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 118 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 348 GSVLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AV+ ++ +L +K FR E+ + L HPN+ L E+ L+ +Y S
Sbjct: 39 GKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 97
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFL-HQNICSNVILVDEDF 460
G ++ L G E + +FR + A + C F+ H+++ + +L+D D
Sbjct: 98 GEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-------YCHQKFIVHRDLKAENLLLDADM 150
Query: 461 DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVLLELA 519
+ +I DFG + T ++ ++ G Y APE + + DV+ +GV+L L
Sbjct: 151 NIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 207
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 51 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 110
Query: 409 LLQGNATELD---------WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E++ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 111 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 167
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 227
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 61 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 120
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 121 VYRELQ-KLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIA 176
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 177 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 225
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 39 ILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ + D A L++ H +H++I +L+ + + +I
Sbjct: 99 VYRELQ-KLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIA 154
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 155 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 347 DGSVLAVKRLNTCKLGEKK---FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL--IYKYM 401
DG +L K L+ + E + +E+N L +L+HPN+ + L + +Y
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 402 SSGTLYSLLQGNATE---LDWPTRFRIGLGAARGLAWLHHGCQ--PPFLHQNICSNVILV 456
G L S++ E LD R+ L H LH+++ + +
Sbjct: 90 EGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL 149
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
D + ++ DFGLA+++ ++ F +G Y++PE + M + K D++ +G +L
Sbjct: 150 DGKQNVKLGDFGLARILNHDED--FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 517 ELAGF 521
EL
Sbjct: 208 ELCAL 212
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 80 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 139
Query: 409 LLQGNATELD---------WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E++ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 140 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 196
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 197 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 256
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 79 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 138 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFV 193
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 59 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 117
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 118 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 173
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 174 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 207
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 58 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 117
Query: 409 LLQ------GNATELDWPT---RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ N L P+ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 118 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 174
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 234
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 98 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 154 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 95/241 (39%), Gaps = 32/241 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L LQ +L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481
ARG+ +L +H+++ + +LV ED +I DFGLA+ + D
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-----AGFKGNLVDWVNQLSSSG 536
++APE + + + DV+ GV+L E+ + + G V+ + +L G
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 268
Query: 537 RSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFSERY 596
+DK E+ ++ +C + P R + Q+ + L+ I A E
Sbjct: 269 HR---MDKP---SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVALTSNQEXL 319
Query: 597 D 597
D
Sbjct: 320 D 320
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 95 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 151 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 48 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 107
Query: 409 LLQ------GNATELDWPT---RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ N L P+ ++ A G+A+L+ F+H+++ + +V ED
Sbjct: 108 YLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAED 164
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 165 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 224
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 56 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 114
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 115 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 170
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 171 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 204
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 52 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 111
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 112 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 167
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 168 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 216
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 58 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 116
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 117 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 172
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 173 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 57 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 115
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 116 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 171
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 172 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 205
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 99
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 100 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 156 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGT 94
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 95 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIA 150
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 151 DFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 338 GTTYKAM-LPDGSVLAVK---RLNTCKLGEKKFR---NEMNRLGQLRHPNLAPLLGYCVV 390
GT +K + +P+G + + ++ K G + F+ + M +G L H ++ LLG C
Sbjct: 45 GTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG 104
Query: 391 EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNI 449
+L + +Y+ G+L ++ + L G+ A+G+ +L HG +H+N+
Sbjct: 105 SSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG----MVHRNL 159
Query: 450 CSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVY 509
+ +L+ ++ DFG+A L+ D+ + ++A E + + DV+
Sbjct: 160 AARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVW 219
Query: 510 GIGVVLLELAGF 521
GV + EL F
Sbjct: 220 SYGVTVWELMTF 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 82 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 141 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 196
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 98 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 154 DFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEK--KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395
G YKA + SVLA ++ K E+ + E++ L HPN+ LL E
Sbjct: 51 GKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLW 110
Query: 396 LIYKYMSSGTLYSLLQGNATELDWP-TRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
++ ++ + G + +++ EL+ P T +I + + L L++ +H+++ + I
Sbjct: 111 ILIEFCAGGAVDAVM----LELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNI 166
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY-----SSTMVASLKGDVY 509
L D D ++ DFG++ T + + +G ++APE S K DV+
Sbjct: 167 LFTLDGDIKLADFGVSAKNTRXIQRR--DXFIGTPYWMAPEVVMCETSKDRPYDYKADVW 224
Query: 510 GIGVVLLELAGFK 522
+G+ L+E+A +
Sbjct: 225 SLGITLIEMAEIE 237
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+AVK +N + L E+ +F NE + + ++ LLG + L++ + M+ G L S
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 409 LLQGNATELD------WPT---RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E + PT ++ A G+A+L+ F+H+N+ + +V D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHD 166
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L ++APE V + D++ GVVL E+
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY 551
+ G S E + K + GY
Sbjct: 227 SLA--------EQPYQGLSNEQVLKFVMDGGY 250
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 78 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 136
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 137 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV 192
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+AVK +N + L E+ +F NE + + ++ LLG + L++ + M+ G L S
Sbjct: 51 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 110
Query: 409 LLQGNATELD------WPT---RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E + PT ++ A G+A+L+ F+H+N+ + +V D
Sbjct: 111 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNLAARNCMVAHD 167
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L ++APE V + D++ GVVL E+
Sbjct: 168 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 227
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY 551
+ G S E + K + GY
Sbjct: 228 SLA--------EQPYQGLSNEQVLKFVMDGGY 251
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 79 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 138 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 95 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS + G Y+ PE + K D++ +GV+ E
Sbjct: 151 DFGWSVHAPSSRRTELC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 98 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 154 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 19/180 (10%)
Query: 348 GSVLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403
G +AVK ++ +L +K FR E+ + L HPN+ L E+ L+ +Y S
Sbjct: 32 GKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASG 90
Query: 404 GTLYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFL-HQNICSNVILVDEDF 460
G ++ L G E + +FR + A + C F+ H+++ + +L+D D
Sbjct: 91 GEVFDYLVAHGWMKEKEARAKFRQIVSAVQ-------YCHQKFIVHRDLKAENLLLDADM 143
Query: 461 DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVLLELA 519
+ +I DFG + T ++ ++ G Y APE + + DV+ +GV+L L
Sbjct: 144 NIKIADFGFSNEFTFGNK---LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV 200
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 338 GTTYKAM-LPDGSVLAVK---RLNTCKLGEKKFR---NEMNRLGQLRHPNLAPLLGYCVV 390
GT +K + +P+G + + ++ K G + F+ + M +G L H ++ LLG C
Sbjct: 27 GTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPG 86
Query: 391 EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNI 449
+L + +Y+ G+L ++ + L G+ A+G+ +L HG +H+N+
Sbjct: 87 SSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG----MVHRNL 141
Query: 450 CSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVY 509
+ +L+ ++ DFG+A L+ D+ + ++A E + + DV+
Sbjct: 142 AARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVW 201
Query: 510 GIGVVLLELAGF 521
GV + EL F
Sbjct: 202 SYGVTVWELMTF 213
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 39 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 99 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 154
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 155 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 63 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 121
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 122 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 177
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 178 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 211
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 39 ILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 98
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ + D A L++ H +H++I +L+ + + +I
Sbjct: 99 VYRELQ-KLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIA 154
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS + G Y+ PE + K D++ +GV+ E
Sbjct: 155 DFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 203
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 140 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 196 GTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVA 229
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 99
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 100 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE K D++ +GV+ E
Sbjct: 156 DFGWSVHAPSSRRTTLC----GTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEF 204
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 99
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 100 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS + G Y+ PE + K D++ +GV+ E
Sbjct: 156 DFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 79 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 138 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 95
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 96 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 151
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS + G Y+ PE + K D++ +GV+ E
Sbjct: 152 DFGWSVHAPSSRRDTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 34 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 93
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 94 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 149
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 150 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 198
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 95
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 96 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 151
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS + G Y+ PE + K D++ +GV+ E
Sbjct: 152 DFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 95 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS + G Y+ PE + K D++ +GV+ E
Sbjct: 151 DFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+AVK +N + L E+ +F NE + + ++ LLG + L++ + M+ G L S
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 409 LLQGNATELD------WPT---RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E + PT ++ A G+A+L+ F+H+++ + +V D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L ++APE V + D++ GVVL E+
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY 551
+ G S E + K + GY
Sbjct: 227 SLA--------EQPYQGLSNEQVLKFVMDGGY 250
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 140 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+AVK +N + L E+ +F NE + + ++ LLG + L++ + M+ G L S
Sbjct: 47 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 106
Query: 409 LLQGNATELD------WPT---RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E + PT ++ A G+A+L+ F+H+++ + +V D
Sbjct: 107 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 163
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L ++APE V + D++ GVVL E+
Sbjct: 164 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 223
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY 551
+ G S E + K + GY
Sbjct: 224 SLA--------EQPYQGLSNEQVLKFVMDGGY 247
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+AVK +N + L E+ +F NE + + ++ LLG + L++ + M+ G L S
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 409 LLQGNATELD------WPT---RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E + PT ++ A G+A+L+ F+H+++ + +V D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L ++APE V + D++ GVVL E+
Sbjct: 167 FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY 551
+ G S E + K + GY
Sbjct: 227 SLA--------EQPYQGLSNEQVLKFVMDGGY 250
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 73/176 (41%), Gaps = 42/176 (23%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLG---------YCVVEEEKLLIYKYMSSGTLYSLLQGNA 414
++F+ E L L+HPN+ C+V L+ + +SGTL + L+
Sbjct: 70 QRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIV-----LVTELXTSGTLKTYLK--- 121
Query: 415 TELDWPTRFRIG---------LGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDARI 464
RF++ +GL +LH PP +H+++ C N+ + +I
Sbjct: 122 -------RFKVXKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKI 173
Query: 465 MDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVLLELA 519
D GLA L +SF +G + APE Y S+ DVY G LE A
Sbjct: 174 GDLGLATL----KRASFAKAVIGTPEFXAPEXYEEKYDESV--DVYAFGXCXLEXA 223
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 140 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 79 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 137
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 138 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 193
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 194 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 227
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 32 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 91
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 92 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 147
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 148 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 196
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 140 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 84/180 (46%), Gaps = 14/180 (7%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+A+K +N + E+ +F NE + + + ++ LLG + L+I + M+ G L S
Sbjct: 45 VAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKS 104
Query: 409 LLQGNATELD---------WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E++ ++ A G+A+L+ F+H+++ + V ED
Sbjct: 105 YLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L +++PE V + DV+ GVVL E+A
Sbjct: 162 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 221
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 82 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 140
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 141 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 196
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 197 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 230
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 79/181 (43%), Gaps = 16/181 (8%)
Query: 351 LAVKRLNTCKLGEKK----------FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YK 399
LA R K+ EK+ E + + +L HP L + ++EKL
Sbjct: 57 LATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLS 115
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
Y +G L ++ + + TRF L +LH +H+++ IL++ED
Sbjct: 116 YAKNGELLKYIRKIGSFDETCTRFYTA-EIVSALEYLHGKG---IIHRDLKPENILLNED 171
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
+I DFG AK+++ + + N +G Y++PE + A D++ +G ++ +L
Sbjct: 172 MHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 231
Query: 520 G 520
Sbjct: 232 A 232
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 95 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 151 DFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 78 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 136
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 137 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 192
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 193 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 226
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKLLI-YKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E + + +L HP L + ++EKL Y +G L ++ + + TRF
Sbjct: 81 RERDVMSRLDHPFFVKLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 139
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH +H+++ IL++ED +I DFG AK+++ + + N +
Sbjct: 140 -EIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFV 195
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG 520
G Y++PE + A D++ +G ++ +L
Sbjct: 196 GTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA 229
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 95
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 96 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 151
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 152 DFGWSCHAPSSRRTTLS----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 200
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 95 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS + G Y+ PE + K D++ +GV+ E
Sbjct: 151 DFGWSVHAPSSRRTDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 13/184 (7%)
Query: 348 GSVLAVKRLNT-CKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G V K +NT L + +NE++ + QL HP L L + E +LI +++S G L
Sbjct: 76 GRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL 135
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD--EDFDARI 464
+ + ++ A GL +H +H +I I+ + + +I
Sbjct: 136 FDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKI 192
Query: 465 MDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGV---VLLE-LAG 520
+DFGLA + + DE V EF APE D++ IGV VLL L+
Sbjct: 193 IDFGLATKL-NPDEIVKVTTATAEFA--APEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
Query: 521 FKGN 524
F G
Sbjct: 250 FAGE 253
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 93/232 (40%), Gaps = 32/232 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L LQ +L
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481
ARG+ +L +H+++ + +LV ED +I DFGLA+ + D
Sbjct: 137 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-----AGFKGNLVDWVNQLSSSG 536
++APE + + + DV+ GV+L E+ + + G V+ + +L G
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG 253
Query: 537 RSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
+DK E+ ++ +C + P R + Q+ + L+ I A
Sbjct: 254 HR---MDKP---SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 296
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 61 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 120
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 121 VYRELQ-KLSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIA 176
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS G Y+ PE + K D++ +GV+ E
Sbjct: 177 DFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 225
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y G
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE 99
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 100 VYKELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 156 DFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 109/229 (47%), Gaps = 27/229 (11%)
Query: 309 KPLVKVKLADLMAASNSFCSENVIISTRTGTTYKA-MLPDGSVLAVKRLNTCKLGEKKFR 367
+ L ++ L+ L + F ++ + G YK + G + A+K ++ E++ +
Sbjct: 9 RSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIK 68
Query: 368 NEMNRLGQL-RHPNLAPLLGYCV------VEEEKLLIYKYMSSGTLYSLLQ---GNATEL 417
E+N L + H N+A G + ++++ L+ ++ +G++ L++ GN +
Sbjct: 69 QEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKE 128
Query: 418 DWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM--TS 475
+W I RGL+ LH Q +H++I +L+ E+ + +++DFG++ + T
Sbjct: 129 EWIAY--ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV 183
Query: 476 SDESSFVNGDLGEFGYIAPEY-----SSTMVASLKGDVYGIGVVLLELA 519
++F+ G ++APE + K D++ +G+ +E+A
Sbjct: 184 GRRNTFI----GTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 73/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 95 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS + G Y+ PE + K D++ +GV+ E
Sbjct: 151 DFGWSVHAPSSRRTXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L LQ +L
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ESS 480
ARG+ +L +H+++ + +LV ED +I DFGLA+ + D
Sbjct: 141 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-----AGFKGNLVDWVNQLSSS 535
NG L ++APE + + + DV+ GV+L E+ + + G V+ + +L
Sbjct: 198 TTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 256
Query: 536 GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
G +DK E+ ++ +C + P R + Q+ + L+ I A
Sbjct: 257 GHR---MDKP---SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 300
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 37 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 96
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 97 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 152
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS G Y+ PE + K D++ +GV+ E
Sbjct: 153 DFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 201
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L LQ +L
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ESS 480
ARG+ +L +H+++ + +LV ED +I DFGLA+ + D
Sbjct: 144 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-----AGFKGNLVDWVNQLSSS 535
NG L ++APE + + + DV+ GV+L E+ + + G V+ + +L
Sbjct: 201 TTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 259
Query: 536 GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
G +DK E+ ++ +C + P R + Q+ + L+ I A
Sbjct: 260 GHR---MDKP---SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 97/225 (43%), Gaps = 21/225 (9%)
Query: 312 VKVKLADLMAASNSFCSENVIISTRTGTTYKAML--PDGSVL--AVKRLNTCKLGE---K 364
+K KL D++ F ++ G+ +A L DGS + AVK L + +
Sbjct: 11 LKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIE 70
Query: 365 KFRNEMNRLGQLRHPNLAPLLGYCVVEEEK------LLIYKYMSSGTLYSLLQG-----N 413
+F E + + HP++A L+G + K ++I +M G L++ L N
Sbjct: 71 EFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGEN 130
Query: 414 ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473
L T R + A G+ +L F+H+++ + ++ ED + DFGL++ +
Sbjct: 131 PFNLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKI 187
Query: 474 TSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
S D ++A E + + ++ DV+ GV + E+
Sbjct: 188 YSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 98/242 (40%), Gaps = 34/242 (14%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L LQ +L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ESS 480
ARG+ +L +H+++ + +LV ED +I DFGLA+ + D
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-----AGFKGNLVDWVNQLSSS 535
NG L ++APE + + + DV+ GV+L E+ + + G V+ + +L
Sbjct: 209 TTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
Query: 536 GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFSER 595
G +DK E+ ++ +C + P R + Q+ + L+ I A E
Sbjct: 268 GHR---MDKP---SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVALTSNQEY 318
Query: 596 YD 597
D
Sbjct: 319 LD 320
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L LQ +L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ESS 480
ARG+ +L +H+++ + +LV ED +I DFGLA+ + D
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-----AGFKGNLVDWVNQLSSS 535
NG L ++APE + + + DV+ GV+L E+ + + G V+ + +L
Sbjct: 209 TTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
Query: 536 GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
G +DK E+ ++ +C + P R + Q+ + L+ I A
Sbjct: 268 GHR---MDKP---SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L LQ +L
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ESS 480
ARG+ +L +H+++ + +LV ED +I DFGLA+ + D
Sbjct: 145 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-----AGFKGNLVDWVNQLSSS 535
NG L ++APE + + + DV+ GV+L E+ + + G V+ + +L
Sbjct: 202 TTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 260
Query: 536 GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
G +DK E+ ++ +C + P R + Q+ + L+ I A
Sbjct: 261 GHR---MDKP---SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 304
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L LQ +L
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ESS 480
ARG+ +L +H+++ + +LV ED +I DFGLA+ + D
Sbjct: 152 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-----AGFKGNLVDWVNQLSSS 535
NG L ++APE + + + DV+ GV+L E+ + + G V+ + +L
Sbjct: 209 TTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 267
Query: 536 GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
G +DK E+ ++ +C + P R + Q+ + L+ I A
Sbjct: 268 GHR---MDKP---SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 74/160 (46%), Gaps = 14/160 (8%)
Query: 370 MNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGA 429
M+ LGQ H N+ LLG C L+I +Y G L + L+ + L+ F I
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANST 160
Query: 430 ARGLAWLHHGCQP----PFL------HQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479
LH Q FL H+++ + +L+ A+I DFGLA+ + +D +
Sbjct: 161 LSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSN 219
Query: 480 SFVNGDLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
V G+ ++APE V +++ DV+ G++L E+
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 259
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 346 PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEEEKLLIYKYM 401
P G V+A K ++ + RN++ R Q+ H P + G + E + ++M
Sbjct: 48 PSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 105
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G+L +L+ A + ++ + +GL +L + +H+++ + ILV+ +
Sbjct: 106 DGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE 162
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
++ DFG++ + S +SFV G Y++PE S++ D++ +G+ L+E+A
Sbjct: 163 IKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 216
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 367 RNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQ-GNATELDWPTRFRI 425
+ E+ L Q P + G + + +I +Y+ G+ LL+ G E T R
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILRE 124
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD 485
L +GL +LH + +H++I + +L+ E D ++ DFG+A +T D N
Sbjct: 125 IL---KGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXF 176
Query: 486 LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
+G ++APE K D++ +G+ +ELA
Sbjct: 177 VGTPFWMAPEVIKQSAYDFKADIWSLGITAIELA 210
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 18/160 (11%)
Query: 370 MNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNA-TELD----WPTRFR 424
M+ LGQ H N+ LLG C L+I +Y G L + L+ A +LD P R
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 425 IGLG----AARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479
L A+G+A+L C +H+++ + +L+ A+I DFGLA+ + +D +
Sbjct: 161 DLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSN 215
Query: 480 SFVNGDLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
V G+ ++APE V +++ DV+ G++L E+
Sbjct: 216 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 18/160 (11%)
Query: 370 MNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNA-TELD----WPTRFR 424
M+ LGQ H N+ LLG C L+I +Y G L + L+ A +LD P R
Sbjct: 95 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 425 IGLG----AARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479
L A+G+A+L C +H+++ + +L+ A+I DFGLA+ + +D +
Sbjct: 153 DLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDIM-NDSN 207
Query: 480 SFVNGDLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
V G+ ++APE V +++ DV+ G++L E+
Sbjct: 208 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 37 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 96
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 97 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 152
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+FG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 153 NFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 201
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 346 PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEEEKLLIYKYM 401
P G V+A K ++ + RN++ R Q+ H P + G + E + ++M
Sbjct: 91 PSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 148
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G+L +L+ A + ++ + +GL +L + +H+++ + ILV+ +
Sbjct: 149 DGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGE 205
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
++ DFG++ + S +SFV G Y++PE S++ D++ +G+ L+E+A
Sbjct: 206 IKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 259
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 338 GTTYK-AMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEE 392
G +K + P G V+A K ++ + RN++ R Q+ H P + G +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77
Query: 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
E + ++M G+L +L+ A + ++ + +GL +L + +H+++ +
Sbjct: 78 EISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPS 134
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIG 512
ILV+ + ++ DFG++ + S +SFV G Y++PE S++ D++ +G
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 513 VVLLELA 519
+ L+E+A
Sbjct: 191 LSLVEMA 197
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +RL++ + G ++ E+N L ++RHPN+ L + +
Sbjct: 29 TGKEYAAKF-----IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83
Query: 395 LLIYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
+LI + +S G L+ L + + D T+F + G+ +LH F + N+
Sbjct: 84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLHSKRIAHFDLK--PENI 139
Query: 454 ILVDEDF---DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYG 510
+L+D++ +++DFG+A + + +E + G ++APE + L+ D++
Sbjct: 140 MLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI---FGTPEFVAPEIVNYEPLGLEADMWS 196
Query: 511 IGVV 514
IGV+
Sbjct: 197 IGVI 200
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 98 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS G Y+ PE + K D++ +GV+ E
Sbjct: 154 DFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 28/205 (13%)
Query: 336 RTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVE--- 391
R G ++ + G +AVK + + + + FR E+ LRH N+ LG+ +
Sbjct: 20 RYGEVWRGLW-HGESVAVK-IFSSRDEQSWFRETEIYNTVLLRHDNI---LGFIASDMTS 74
Query: 392 ----EEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH---HGCQ--P 442
+ LI Y G+LY LQ E R+ + AA GLA LH G Q P
Sbjct: 75 RNSSTQLWLITHYHEHGSLYDFLQRQTLEPH--LALRLAVSAACGLAHLHVEIFGTQGKP 132
Query: 443 PFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV--NGDLGEFGYIAPEYSSTM 500
H++ S +LV + I D GLA + + + + N +G Y+APE
Sbjct: 133 AIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQ 192
Query: 501 V-----ASLK-GDVYGIGVVLLELA 519
+ S K D++ G+VL E+A
Sbjct: 193 IRTDCFESYKWTDIWAFGLVLWEIA 217
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 346 PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEEEKLLIYKYM 401
P G V+A K ++ + RN++ R Q+ H P + G + E + ++M
Sbjct: 29 PSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G+L +L+ A + ++ + +GL +L + +H+++ + ILV+ +
Sbjct: 87 DGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGE 143
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
++ DFG++ + S +SFV G Y++PE S++ D++ +G+ L+E+A
Sbjct: 144 IKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 338 GTTYK-AMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEE 392
G +K + P G V+A K ++ + RN++ R Q+ H P + G +
Sbjct: 47 GVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 104
Query: 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
E + ++M G+L +L+ A + ++ + +GL +L + +H+++ +
Sbjct: 105 EISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPS 161
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIG 512
ILV+ + ++ DFG++ + S +SFV G Y++PE S++ D++ +G
Sbjct: 162 NILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMG 217
Query: 513 VVLLELA 519
+ L+E+A
Sbjct: 218 LSLVEMA 224
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSGTLYSLLQGNATELDWPTRF 423
++ E+ L L H ++ G C + EK L+ +Y+ G+L L + L F
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF 117
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV- 482
+ G+A+LH ++H+ + + +L+D D +I DFGLAK + E V
Sbjct: 118 AQQI--CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 172
Query: 483 -NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
+GD F Y APE DV+ GV L EL +
Sbjct: 173 EDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTY 211
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSGTLYSLLQGNATELDWPTRF 423
++ E+ L L H ++ G C + EK L+ +Y+ G+L L + L F
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF 116
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV- 482
+ G+A+LH ++H+ + + +L+D D +I DFGLAK + E V
Sbjct: 117 AQQI--CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVR 171
Query: 483 -NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
+GD F Y APE DV+ GV L EL +
Sbjct: 172 EDGDSPVFWY-APECLKECKFYYASDVWSFGVTLYELLTY 210
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 35 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 94
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 95 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS G Y+ PE + K D++ +GV+ E
Sbjct: 151 DFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 199
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 89/184 (48%), Gaps = 18/184 (9%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +RL++ + G ++ E+N L ++RHPN+ L + +
Sbjct: 36 TGKEYAAKF-----IKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 90
Query: 395 LLIYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
+LI + +S G L+ L + + D T+F + G+ +LH F + N+
Sbjct: 91 VLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLHSKRIAHFDLK--PENI 146
Query: 454 ILVDEDF---DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYG 510
+L+D++ +++DFG+A + + +E + G ++APE + L+ D++
Sbjct: 147 MLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI---FGTPEFVAPEIVNYEPLGLEADMWS 203
Query: 511 IGVV 514
IGV+
Sbjct: 204 IGVI 207
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+AVK +N + L E+ +F NE + + ++ LLG + L++ + M+ G L S
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 409 LLQGNATELD------WPT---RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E + PT ++ A G+A+L+ F+H+++ + +V D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L ++APE V + D++ GVVL E+
Sbjct: 167 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY 551
+ G S E + K + GY
Sbjct: 227 SLA--------EQPYQGLSNEQVLKFVMDGGY 250
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 87/178 (48%), Gaps = 13/178 (7%)
Query: 346 PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEEEKLLIYKYM 401
P G V+A K ++ + RN++ R Q+ H P + G + E + ++M
Sbjct: 29 PSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 86
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G+L +L+ A + ++ + +GL +L + +H+++ + ILV+ +
Sbjct: 87 DGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGE 143
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
++ DFG++ + S +SFV G Y++PE S++ D++ +G+ L+E+A
Sbjct: 144 IKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 197
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 34/233 (14%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L LQ +L
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ESS 480
ARG+ +L +H+++ + +LV ED +I DFGLA+ + D
Sbjct: 193 LVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL-----AGFKGNLVDWVNQLSSS 535
NG L ++APE + + + DV+ GV+L E+ + + G V+ + +L
Sbjct: 250 TTNGRL-PVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 308
Query: 536 GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588
G +DK E+ ++ +C + P R + Q+ + L+ I A
Sbjct: 309 GHR---MDKP---SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRIVA 352
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 338 GTTYK-AMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEE 392
G +K + P G V+A K ++ + RN++ R Q+ H P + G +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77
Query: 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
E + ++M G+L +L+ A + ++ + +GL +L + +H+++ +
Sbjct: 78 EISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPS 134
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIG 512
ILV+ + ++ DFG++ + S +SFV G Y++PE S++ D++ +G
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 513 VVLLELA 519
+ L+E+A
Sbjct: 191 LSLVEMA 197
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 91/187 (48%), Gaps = 14/187 (7%)
Query: 338 GTTYK-AMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEE 392
G +K + P G V+A K ++ + RN++ R Q+ H P + G +
Sbjct: 20 GVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG 77
Query: 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
E + ++M G+L +L+ A + ++ + +GL +L + +H+++ +
Sbjct: 78 EISICMEHMDGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPS 134
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIG 512
ILV+ + ++ DFG++ + S +SFV G Y++PE S++ D++ +G
Sbjct: 135 NILVNSRGEIKLCDFGVSGQLIDSMANSFV----GTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 513 VVLLELA 519
+ L+E+A
Sbjct: 191 LSLVEMA 197
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 72/173 (41%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 98 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS G Y+ PE + K D++ +GV+ E
Sbjct: 154 DFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
Query: 338 GTTYKAMLPD-GSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
G+ YKA+ + G ++A+K++ + ++ E++ + Q P++ G + +
Sbjct: 43 GSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101
Query: 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456
+ +Y +G++ +++ L I +GL +LH + +H++I + IL+
Sbjct: 102 VMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILL 158
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
+ + A++ DFG+A +T D + N +G ++APE + + D++ +G+ +
Sbjct: 159 NTEGHAKLADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAI 216
Query: 517 ELAGFKGNLVD 527
E+A K D
Sbjct: 217 EMAEGKPPYAD 227
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y GT
Sbjct: 38 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT 97
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 98 VYRELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+FG + SS ++ G Y+ PE + K D++ +GV+ E
Sbjct: 154 NFGWSVHAPSSRRTTLC----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 23/205 (11%)
Query: 322 ASNSFCS---ENVIISTRTGTTYK-AMLPDGSVLAVKRLNTCKLGEKK-FRNEMNRLGQL 376
A NSF + ++ R G +K G LA K + T + +K+ +NE++ + QL
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL---QGNATELD---WPTRFRIGLGAA 430
H NL L + + +L+ +Y+ G L+ + N TELD + + G+
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHM 203
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDF-DARIMDFGLAKLMTSSDESSFVNGDLGEF 489
+ LH +P N++ V+ D +I+DFGLA+ ++ + + G
Sbjct: 204 HQMYILHLDLKP--------ENILCVNRDAKQIKIIDFGLARRYKPREK---LKVNFGTP 252
Query: 490 GYIAPEYSSTMVASLKGDVYGIGVV 514
++APE + S D++ +GV+
Sbjct: 253 EFLAPEVVNYDFVSFPTDMWSVGVI 277
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 12/211 (5%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRI 425
F E+N + L H NL L G + K+ + + G+L L+ + T R
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRY 116
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ A G+ +L F+H+++ + N++L D +I DFGL + + +D+ +
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHXVMQE 172
Query: 485 DLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID 543
F + APE T S D + GV L E+ F W+ S K ID
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM--FTYGQEPWIGLNGSQILHK--ID 228
Query: 544 KALCGKGYDEEILQ-FLKVACNCVVSRPKDR 573
K E+ Q V C +P+DR
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 82/174 (47%), Gaps = 16/174 (9%)
Query: 348 GSVLAVKRL--NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
G + AVK + K E NE+ L +++H N+ L L+ + +S G
Sbjct: 47 GKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGE 106
Query: 406 LYSLL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDA 462
L+ + +G TE D T R L A + +LH + +H+++ N++ +D ++
Sbjct: 107 LFDRIVEKGFYTEKDASTLIRQVLDA---VYYLH---RMGIVHRDLKPENLLYYSQDEES 160
Query: 463 RIM--DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
+IM DFGL+K+ D ++ G GY+APE + S D + IGV+
Sbjct: 161 KIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 88/184 (47%), Gaps = 18/184 (9%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +RL + + G ++ E+N L ++RHPN+ L + +
Sbjct: 50 TGKEYAAKF-----IKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 104
Query: 395 LLIYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
+LI + +S G L+ L + + D T+F + G+ +LH F + N+
Sbjct: 105 VLILELVSGGELFDFLAEKESLTEDEATQFLKQI--LDGVHYLHSKRIAHFDLK--PENI 160
Query: 454 ILVDEDF---DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYG 510
+L+D++ +++DFG+A + + +E + G ++APE + L+ D++
Sbjct: 161 MLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNI---FGTPEFVAPEIVNYEPLGLEADMWS 217
Query: 511 IGVV 514
IGV+
Sbjct: 218 IGVI 221
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 12/211 (5%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRI 425
F E+N + L H NL L G + K+ + + G+L L+ + T R
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ A G+ +L F+H+++ + N++L D +I DFGL + + +D+ +
Sbjct: 127 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHXVMQE 182
Query: 485 DLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID 543
F + APE T S D + GV L E+ F W+ S K ID
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM--FTYGQEPWIGLNGSQILHK--ID 238
Query: 544 KALCGKGYDEEILQ-FLKVACNCVVSRPKDR 573
K E+ Q V C +P+DR
Sbjct: 239 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 93/212 (43%), Gaps = 22/212 (10%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+AVK +N + L E+ +F NE + + ++ LLG + L++ + M+ G L S
Sbjct: 49 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 108
Query: 409 LLQGNATELDW-PTR--------FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E + P R ++ A G+A+L+ F+H+++ + +V D
Sbjct: 109 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 165
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + +D L ++APE V + D++ GVVL E+
Sbjct: 166 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 225
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY 551
+ G S E + K + GY
Sbjct: 226 SLA--------EQPYQGLSNEQVLKFVMDGGY 249
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 12/211 (5%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRI 425
F E+N + L H NL L G + K+ + + G+L L+ + T R
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRY 120
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ A G+ +L F+H+++ + N++L D +I DFGL + + +D+ +
Sbjct: 121 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQE 176
Query: 485 DLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID 543
F + APE T S D + GV L E+ F W+ S K ID
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM--FTYGQEPWIGLNGSQILHK--ID 232
Query: 544 KALCGKGYDEEILQ-FLKVACNCVVSRPKDR 573
K E+ Q V C +P+DR
Sbjct: 233 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 12/211 (5%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRI 425
F E+N + L H NL L G + K+ + + G+L L+ + T R
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRY 120
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ A G+ +L F+H+++ + N++L D +I DFGL + + +D+ +
Sbjct: 121 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQE 176
Query: 485 DLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID 543
F + APE T S D + GV L E+ F W+ S K ID
Sbjct: 177 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM--FTYGQEPWIGLNGSQILHK--ID 232
Query: 544 KALCGKGYDEEILQ-FLKVACNCVVSRPKDR 573
K E+ Q V C +P+DR
Sbjct: 233 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 263
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGE---KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
G YKA G ++A+KR+ E E++ L +L HPN+ L+ E
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGL-GAARGLAWLHHGCQPPFLHQNICSNV 453
L++++M L +L N T L ++ +I L RG+A H Q LH+++
Sbjct: 95 TLVFEFMEKD-LKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQN 149
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY-SSTMVASLKGDVYGIG 512
+L++ D ++ DFGLA+ S ++ Y AP+ + S D++ IG
Sbjct: 150 LLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIG 207
Query: 513 VVLLEL 518
+ E+
Sbjct: 208 CIFAEM 213
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 12/173 (6%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+LA+K L +L E + R E+ LRHPN+ L GY LI +Y G
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGE 99
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
+Y LQ ++ D A L++ H +H++I +L+ + +I
Sbjct: 100 VYKELQ-KLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFG + SS G Y+ PE + K D++ +GV+ E
Sbjct: 156 DFGWSVHAPSSRRXXLX----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 204
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGE---KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
G YKA G ++A+KR+ E E++ L +L HPN+ L+ E
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGL-GAARGLAWLHHGCQPPFLHQNICSNV 453
L++++M L +L N T L ++ +I L RG+A H Q LH+++
Sbjct: 95 TLVFEFMEKD-LKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQN 149
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY-SSTMVASLKGDVYGIG 512
+L++ D ++ DFGLA+ S ++ Y AP+ + S D++ IG
Sbjct: 150 LLINSDGALKLADFGLARAFGIPVRS--YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIG 207
Query: 513 VVLLEL 518
+ E+
Sbjct: 208 CIFAEM 213
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 12/211 (5%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRI 425
F E+N + L H NL L G + K+ + + G+L L+ + T R
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRY 116
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ A G+ +L F+H+++ + N++L D +I DFGL + + +D+ +
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQE 172
Query: 485 DLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID 543
F + APE T S D + GV L E+ F W+ S K ID
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM--FTYGQEPWIGLNGSQILHK--ID 228
Query: 544 KALCGKGYDEEILQ-FLKVACNCVVSRPKDR 573
K E+ Q V C +P+DR
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 12/211 (5%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRI 425
F E+N + L H NL L G + K+ + + G+L L+ + T R
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRY 116
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ A G+ +L F+H+++ + N++L D +I DFGL + + +D+ +
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQE 172
Query: 485 DLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID 543
F + APE T S D + GV L E+ F W+ S K ID
Sbjct: 173 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM--FTYGQEPWIGLNGSQILHK--ID 228
Query: 544 KALCGKGYDEEILQ-FLKVACNCVVSRPKDR 573
K E+ Q V C +P+DR
Sbjct: 229 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 259
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 86/211 (40%), Gaps = 12/211 (5%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRI 425
F E+N + L H NL L G + K+ + + G+L L+ + T R
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFLLGTLSRY 126
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ A G+ +L F+H+++ + N++L D +I DFGL + + +D+ +
Sbjct: 127 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDL-VKIGDFGLMRALPQNDDHYVMQE 182
Query: 485 DLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID 543
F + APE T S D + GV L E+ F W+ S K ID
Sbjct: 183 HRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM--FTYGQEPWIGLNGSQILHK--ID 238
Query: 544 KALCGKGYDEEILQ-FLKVACNCVVSRPKDR 573
K E+ Q V C +P+DR
Sbjct: 239 KEGERLPRPEDCPQDIYNVMVQCWAHKPEDR 269
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 12/182 (6%)
Query: 342 KAMLPD-GSVLAVKRLNTCKLGEK-KFRNEMNR--LGQLRHPNLAPLLGYCVVEEEKL-L 396
K PD G + A+K L L + + R +M R L + HP + L Y E KL L
Sbjct: 49 KVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL-HYAFQTEGKLYL 107
Query: 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456
I ++ G L++ L + +F + A GL LH +++++ IL+
Sbjct: 108 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-ELALGLDHLH---SLGIIYRDLKPENILL 163
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
DE+ ++ DFGL+K ++ ++ G Y+APE + S D + GV++
Sbjct: 164 DEEGHIKLTDFGLSKEAIDHEKKAY--SFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMF 221
Query: 517 EL 518
E+
Sbjct: 222 EM 223
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 75/182 (41%), Gaps = 16/182 (8%)
Query: 45 ETVAEDDVKCLEGVKSSLNDPQRKLSSWSFGNSTIGFICQFVGVSCWNDKEN-RILNLEL 103
E D + L +K L +P LSSW +T ++GV C D + R+ NL+L
Sbjct: 1 ELCNPQDKQALLQIKKDLGNPT-TLSSWL--PTTDCCNRTWLGVLCDTDTQTYRVNNLDL 57
Query: 104 REMKLSGKIPEPLKFCKSMQRLDL-------SANDLSGNIPAQICNWLPYLVXXXXXXXX 156
+ L P+P S+ L N+L G IP I L L
Sbjct: 58 SGLNL----PKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAK-LTQLHYLYITHTN 112
Query: 157 XXGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF 216
G IP L L TL S N LSG +P +S+L L + N ++G IP S+ F
Sbjct: 113 VSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSF 172
Query: 217 DK 218
K
Sbjct: 173 SK 174
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 24/150 (16%)
Query: 107 KLSGKIPEPL-KFCKSMQRLDLSANDLSGNIPAQICNWLPYLV----------------- 148
++SG IP+ F K + +S N L+G IP N V
Sbjct: 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGS 219
Query: 149 -XXXXXXXXXXGPIPADLGNCTY---LNTLILSNNKLSGPIPYQLSNLGRLKKFSVANND 204
+ DLG LN L L NN++ G +P L+ L L +V+ N+
Sbjct: 220 DKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279
Query: 205 LTGTIPS--SFKGFDKADFDGNSDLCGGPL 232
L G IP + + FD + + N LCG PL
Sbjct: 280 LCGEIPQGGNLQRFDVSAYANNKCLCGSPL 309
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 367 RNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQ-GNATELDWPTRFRI 425
+ E+ L Q P + G + + + +I +Y+ G+ LL+ G E T R
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILRE 127
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD 485
L +GL +LH + +H++I + +L+ E + ++ DFG+A +T D N
Sbjct: 128 IL---KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXF 179
Query: 486 LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
+G ++APE K D++ +G+ +ELA
Sbjct: 180 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 213
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 80/185 (43%), Gaps = 28/185 (15%)
Query: 348 GSVLAVKRLNTCKLGEKK--FRNEMNRLGQLRHPNLAPLLGYC--VVEEEKLLIYKYMSS 403
G ++AVK L + + ++ E++ L L H ++ G C L+ +Y+
Sbjct: 60 GEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPL 119
Query: 404 GTLYSLLQGNATELDWPTRFRIGLGA--------ARGLAWLHHGCQPPFLHQNICSNVIL 455
G+L D+ R IGL G+A+LH ++H+++ + +L
Sbjct: 120 GSL----------RDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVL 166
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFV--NGDLGEFGYIAPEYSSTMVASLKGDVYGIGV 513
+D D +I DFGLAK + E V +GD F Y APE DV+ GV
Sbjct: 167 LDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWY-APECLKEYKFYYASDVWSFGV 225
Query: 514 VLLEL 518
L EL
Sbjct: 226 TLYEL 230
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 367 RNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQ-GNATELDWPTRFRI 425
+ E+ L Q P + G + + + +I +Y+ G+ LL+ G E T R
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILRE 112
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD 485
L +GL +LH + +H++I + +L+ E + ++ DFG+A +T D N
Sbjct: 113 IL---KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTF 164
Query: 486 LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
+G ++APE K D++ +G+ +ELA
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 198
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 367 RNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQ-GNATELDWPTRFRI 425
+ E+ L Q P + G + + + +I +Y+ G+ LL+ G E T R
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILRE 112
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD 485
L +GL +LH + +H++I + +L+ E + ++ DFG+A +T D N
Sbjct: 113 IL---KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXF 164
Query: 486 LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
+G ++APE K D++ +G+ +ELA
Sbjct: 165 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 198
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 7/156 (4%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRF 423
++ +NE+ QL+HP++ L Y L+ + +G + L+
Sbjct: 56 QRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR 115
Query: 424 RIGLGAARGLAWLH-HGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV 482
G+ +LH HG LH+++ + +L+ + + +I DFGLA + E +
Sbjct: 116 HFMHQIITGMLYLHSHG----ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT 171
Query: 483 NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
G YI+PE ++ L+ DV+ +G + L
Sbjct: 172 --LCGTPNYISPEIATRSAHGLESDVWSLGCMFYTL 205
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 367 RNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQ-GNATELDWPTRFRI 425
+ E+ L Q P + G + + + +I +Y+ G+ LL+ G E T R
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILRE 132
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD 485
L +GL +LH + +H++I + +L+ E + ++ DFG+A +T D N
Sbjct: 133 IL---KGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTF 184
Query: 486 LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
+G ++APE K D++ +G+ +ELA
Sbjct: 185 VGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA 218
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 10/175 (5%)
Query: 348 GSVLAVKRL---NTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSG 404
G ++A+K+ + K+ +K E+ L QLRH NL LL C ++ L+++++
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDH- 108
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
T+ L+ LD+ + G+ + H +H++I ILV + ++
Sbjct: 109 TILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKL 165
Query: 465 MDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
DFG A+ + + E + ++ Y APE V K DV+ IG ++ E+
Sbjct: 166 CDFGFARTLAAPGE--VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEM 218
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
E N + QL +P + ++G C E +L+ + G L LQ N D +
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 119
Query: 429 AARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
+ G+ +L + F+H+++ + NV+LV + + A+I DFGL+K + +DE+ + G
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHY-AKISDFGLSKAL-RADENXYKAQTHG 174
Query: 488 EF--GYIAPEYSSTMVASLKGDVYGIGVVLLE 517
++ + APE + S K DV+ GV++ E
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 365 KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
+ E++ L LRHP++ L + +++ +Y +++ D RF
Sbjct: 55 RVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFF 114
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ A + + H + +H+++ +L+D++ + +I DFGL+ +MT + +F+
Sbjct: 115 QQIICA--IEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMT---DGNFLKT 166
Query: 485 DLGEFGYIAPEY-SSTMVASLKGDVYGIGVVL 515
G Y APE + + A + DV+ G+VL
Sbjct: 167 SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVL 198
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ RI DFGLA+ + + D
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMRIADFGLARDINNIDYYK 214
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 215 KTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
E N + QL +P + ++G C E +L+ + G L LQ N D +
Sbjct: 58 EANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 115
Query: 429 AARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
+ G+ +L + F+H+++ + NV+LV + + A+I DFGL+K + +DE+ + G
Sbjct: 116 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHY-AKISDFGLSKAL-RADENYYKAQTHG 170
Query: 488 EF--GYIAPEYSSTMVASLKGDVYGIGVVLLE 517
++ + APE + S K DV+ GV++ E
Sbjct: 171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
E N + QL +P + ++G C E +L+ + G L LQ N D +
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 135
Query: 429 AARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
+ G+ +L + F+H+++ + NV+LV + + A+I DFGL+K + +DE+ + G
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHY-AKISDFGLSKAL-RADENYYKAQTHG 190
Query: 488 EF--GYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
++ + APE + S K DV+ GV++ E +
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 226
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
E N + QL +P + ++G C E +L+ + G L LQ N D +
Sbjct: 78 EANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 135
Query: 429 AARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
+ G+ +L + F+H+++ + NV+LV + + A+I DFGL+K + +DE+ + G
Sbjct: 136 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHY-AKISDFGLSKAL-RADENYYKAQTHG 190
Query: 488 EF--GYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
++ + APE + S K DV+ GV++ E +
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 226
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
E N + QL +P + ++G C E +L+ + G L LQ N D +
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 119
Query: 429 AARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
+ G+ +L + F+H+++ + NV+LV + + A+I DFGL+K + +DE+ + G
Sbjct: 120 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHY-AKISDFGLSKAL-RADENYYKAQTHG 174
Query: 488 EF--GYIAPEYSSTMVASLKGDVYGIGVVLLE 517
++ + APE + S K DV+ GV++ E
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
E N + QL +P + ++G C E +L+ + G L LQ N D +
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 113
Query: 429 AARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
+ G+ +L + F+H+++ + NV+LV + + A+I DFGL+K + +DE+ + G
Sbjct: 114 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHY-AKISDFGLSKAL-RADENYYKAQTHG 168
Query: 488 EF--GYIAPEYSSTMVASLKGDVYGIGVVLLE 517
++ + APE + S K DV+ GV++ E
Sbjct: 169 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 10/156 (6%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
E N + QL +P + ++G C E +L+ + G L LQ N D +
Sbjct: 76 EANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 133
Query: 429 AARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
+ G+ +L + F+H+++ + NV+LV + + A+I DFGL+K + +DE+ + G
Sbjct: 134 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHY-AKISDFGLSKAL-RADENYYKAQTHG 188
Query: 488 EF--GYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521
++ + APE + S K DV+ GV++ E +
Sbjct: 189 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSY 224
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 363 EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL--QGNATELDWP 420
E NE+ L +++HPN+ L LI + +S G L+ + +G TE D
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 421 TRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL---VDEDFDARIMDFGLAKLMTSSD 477
R+ + +LH +H+++ +L +DED I DFGL+K+ D
Sbjct: 120 ---RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---ED 170
Query: 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
S ++ G GY+APE + S D + IGV+
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 363 EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL--QGNATELDWP 420
E NE+ L +++HPN+ L LI + +S G L+ + +G TE D
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 421 TRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL---VDEDFDARIMDFGLAKLMTSSD 477
R+ + +LH +H+++ +L +DED I DFGL+K+ D
Sbjct: 120 ---RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---ED 170
Query: 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
S ++ G GY+APE + S D + IGV+
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
E N + QL +P + ++G C E +L+ + G L LQ N D +
Sbjct: 68 EANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 125
Query: 429 AARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
+ G+ +L + F+H+++ + NV+LV + + A+I DFGL+K + +DE+ + G
Sbjct: 126 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHY-AKISDFGLSKAL-RADENYYKAQTHG 180
Query: 488 EF--GYIAPEYSSTMVASLKGDVYGIGVVLLE 517
++ + APE + S K DV+ GV++ E
Sbjct: 181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
++APE V + + DV+ GV++ E+ G+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 363 EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL--QGNATELDWP 420
E NE+ L +++HPN+ L LI + +S G L+ + +G TE D
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 421 TRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL---VDEDFDARIMDFGLAKLMTSSD 477
R+ + +LH +H+++ +L +DED I DFGL+K+ D
Sbjct: 120 ---RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---ED 170
Query: 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
S ++ G GY+APE + S D + IGV+
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDXXK 214
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
++APE V + + DV+ GV++ E+ G+
Sbjct: 215 KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 107/264 (40%), Gaps = 42/264 (15%)
Query: 366 FRN-EMNRLGQLRHPNLAPLLGYCVVEEEK-------LLIYKYMSSGTLYSLLQGNATEL 417
FR E+ + LRH N+ LG+ + + L+ Y G+L+ L N +
Sbjct: 82 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 136
Query: 418 DWPTRFRIGLGAARGLAWLHH---GCQ--PPFLHQNICSNVILVDEDFDARIMDFGLAKL 472
++ L A GLA LH G Q P H+++ S ILV ++ I D GLA
Sbjct: 137 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 196
Query: 473 MTSSDESSFV--NGDLGEFGYIAPEYSSTMV------ASLKGDVYGIGVVLLELA----- 519
S+ ++ + N +G Y+APE + + + D+Y +G+V E+A
Sbjct: 197 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSI 256
Query: 520 -GFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYD----------EEILQFLKVACNCVVS 568
G + L S S E + K +C + E + K+ C +
Sbjct: 257 GGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA 316
Query: 569 RPKDRWSMYQVYQSLNSIAAQHGF 592
R + ++ ++L+ ++ Q G
Sbjct: 317 NGAARLTALRIKKTLSQLSQQEGI 340
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 366 FRN-EMNRLGQLRHPNLAPLLGYCVVEEEK-------LLIYKYMSSGTLYSLLQGNATEL 417
FR E+ + LRH N+ LG+ + + L+ Y G+L+ L N +
Sbjct: 43 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 97
Query: 418 DWPTRFRIGLGAARGLAWLHH---GCQ--PPFLHQNICSNVILVDEDFDARIMDFGLAKL 472
++ L A GLA LH G Q P H+++ S ILV ++ I D GLA
Sbjct: 98 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157
Query: 473 MTSSDESSFV--NGDLGEFGYIAPEYSSTMV------ASLKGDVYGIGVVLLELA 519
S+ ++ + N +G Y+APE + + + D+Y +G+V E+A
Sbjct: 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 212
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 84/172 (48%), Gaps = 8/172 (4%)
Query: 348 GSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G +AVK+++ K ++ NE+ + H N+ + +V +E ++ +++ G L
Sbjct: 70 GKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL 129
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
++ T ++ + L R L++LH+ +H++I S+ IL+ D ++ D
Sbjct: 130 TDIV--THTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSD 184
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
FG + S E +G ++APE S + + D++ +G++++E+
Sbjct: 185 FGFCAQV--SKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEM 234
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 366 FRN-EMNRLGQLRHPNLAPLLGYCVVEEEK-------LLIYKYMSSGTLYSLLQGNATEL 417
FR E+ + LRH N+ LG+ + + L+ Y G+L+ L N +
Sbjct: 49 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 103
Query: 418 DWPTRFRIGLGAARGLAWLHH---GCQ--PPFLHQNICSNVILVDEDFDARIMDFGLAKL 472
++ L A GLA LH G Q P H+++ S ILV ++ I D GLA
Sbjct: 104 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 163
Query: 473 MTSSDESSFV--NGDLGEFGYIAPEYSSTMV------ASLKGDVYGIGVVLLELA 519
S+ ++ + N +G Y+APE + + + D+Y +G+V E+A
Sbjct: 164 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 218
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 366 FRN-EMNRLGQLRHPNLAPLLGYCVVEEEK-------LLIYKYMSSGTLYSLLQGNATEL 417
FR E+ + LRH N+ LG+ + + L+ Y G+L+ L N +
Sbjct: 69 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 123
Query: 418 DWPTRFRIGLGAARGLAWLHH---GCQ--PPFLHQNICSNVILVDEDFDARIMDFGLAKL 472
++ L A GLA LH G Q P H+++ S ILV ++ I D GLA
Sbjct: 124 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 183
Query: 473 MTSSDESSFV--NGDLGEFGYIAPEYSSTMV------ASLKGDVYGIGVVLLELA 519
S+ ++ + N +G Y+APE + + + D+Y +G+V E+A
Sbjct: 184 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 238
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 14/157 (8%)
Query: 363 EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL--QGNATELDWP 420
E NE+ L +++HPN+ L LI + +S G L+ + +G TE D
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS 119
Query: 421 TRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL---VDEDFDARIMDFGLAKLMTSSD 477
R+ + +LH +H+++ +L +DED I DFGL+K+ D
Sbjct: 120 ---RLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---ED 170
Query: 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
S ++ G GY+APE + S D + IGV+
Sbjct: 171 PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 207
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 366 FRN-EMNRLGQLRHPNLAPLLGYCVVEEEK-------LLIYKYMSSGTLYSLLQGNATEL 417
FR E+ + LRH N+ LG+ + + L+ Y G+L+ L N +
Sbjct: 46 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 100
Query: 418 DWPTRFRIGLGAARGLAWLHH---GCQ--PPFLHQNICSNVILVDEDFDARIMDFGLAKL 472
++ L A GLA LH G Q P H+++ S ILV ++ I D GLA
Sbjct: 101 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 160
Query: 473 MTSSDESSFV--NGDLGEFGYIAPEYSSTMV------ASLKGDVYGIGVVLLELA 519
S+ ++ + N +G Y+APE + + + D+Y +G+V E+A
Sbjct: 161 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 215
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 78/175 (44%), Gaps = 26/175 (14%)
Query: 366 FRN-EMNRLGQLRHPNLAPLLGYCVVEEEK-------LLIYKYMSSGTLYSLLQGNATEL 417
FR E+ + LRH N+ LG+ + + L+ Y G+L+ L N +
Sbjct: 44 FREAEIYQTVMLRHENI---LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL--NRYTV 98
Query: 418 DWPTRFRIGLGAARGLAWLHH---GCQ--PPFLHQNICSNVILVDEDFDARIMDFGLAKL 472
++ L A GLA LH G Q P H+++ S ILV ++ I D GLA
Sbjct: 99 TVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 158
Query: 473 MTSSDESSFV--NGDLGEFGYIAPEYSSTMV------ASLKGDVYGIGVVLLELA 519
S+ ++ + N +G Y+APE + + + D+Y +G+V E+A
Sbjct: 159 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA 213
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 205 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 260
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 261 KTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 304
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 215 KTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
E N + QL +P + ++G C E +L+ + G L LQ N D +
Sbjct: 420 EANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 477
Query: 429 AARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
+ G+ +L + F+H+++ + NV+LV + + A+I DFGL+K + +DE+ + G
Sbjct: 478 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHY-AKISDFGLSKAL-RADENYYKAQTHG 532
Query: 488 EF--GYIAPEYSSTMVASLKGDVYGIGVVLLE 517
++ + APE + S K DV+ GV++ E
Sbjct: 533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 564
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
+ NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 215 NTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 10/152 (6%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
E N + QL +P + ++G C E +L+ + G L LQ N D +
Sbjct: 421 EANVMQQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD-KNIIELVHQ 478
Query: 429 AARGLAWLHHGCQPPFLHQNICS-NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
+ G+ +L + F+H+++ + NV+LV + + A+I DFGL+K + +DE+ + G
Sbjct: 479 VSMGMKYLE---ESNFVHRDLAARNVLLVTQHY-AKISDFGLSKAL-RADENYYKAQTHG 533
Query: 488 EF--GYIAPEYSSTMVASLKGDVYGIGVVLLE 517
++ + APE + S K DV+ GV++ E
Sbjct: 534 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 565
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 38 KIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 95 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 150
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 151 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 22/212 (10%)
Query: 351 LAVKRLN-TCKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
+AVK +N + L E+ +F NE + + ++ LLG + L++ + M+ G L S
Sbjct: 50 VAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKS 109
Query: 409 LLQGNATELD------WPT---RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
L+ E + PT ++ A G+A+L+ F+H+++ + +V D
Sbjct: 110 YLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHD 166
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
F +I DFG+ + + + L ++APE V + D++ GVVL E+
Sbjct: 167 FTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT 226
Query: 520 GFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY 551
+ G S E + K + GY
Sbjct: 227 SLA--------EQPYQGLSNEQVLKFVMDGGY 250
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Query: 348 GSVLAVKRLNTCKLGEKK-FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G+ A K + T +K+ R E+ + LRHP L L + E ++IY++MS G L
Sbjct: 182 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 241
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL--VDEDFDARI 464
+ + ++ +GL +H ++H ++ I+ + ++
Sbjct: 242 FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKL 298
Query: 465 MDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
+DFGL + D V G + APE + D++ +GV+
Sbjct: 299 IDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 345
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 9/170 (5%)
Query: 348 GSVLAVKRLNTCKLGEKK-FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G+ A K + T +K+ R E+ + LRHP L L + E ++IY++MS G L
Sbjct: 76 GNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL 135
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL--VDEDFDARI 464
+ + ++ +GL +H ++H ++ I+ + ++
Sbjct: 136 FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKL 192
Query: 465 MDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
+DFGL + D V G + APE + D++ +GV+
Sbjct: 193 IDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL 239
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 85/178 (47%), Gaps = 13/178 (7%)
Query: 346 PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEEEKLLIYKYM 401
P G V+A K ++ + RN++ R Q+ H P + G + E + ++M
Sbjct: 32 PSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHM 89
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
G+L +L+ A + ++ + +GL +L + +H+++ + ILV+ +
Sbjct: 90 DGGSLDQVLK-KAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGE 146
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
++ DFG++ + + FV G Y++PE S++ D++ +G+ L+E+A
Sbjct: 147 IKLCDFGVSGQLIDEMANEFV----GTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA 200
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 146 LVSCTYQLARGMEYLASQKC----IHRDLTARNVLVTENNVMKIADFGLARDINNIDYYK 201
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 202 KTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 245
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 148 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 203
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 204 KTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 247
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 151 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 206
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 207 KTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 250
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 365 KFRNEMNRLGQLRHPNLAPLLGYCVVEEE------KLLIYKYMSSGTLYSLLQGNATELD 418
+FR E L HP + + Y E E ++ +Y+ TL ++
Sbjct: 58 RFRREAQNAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-- 113
Query: 419 WPTR-FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477
P R + A + L + H Q +H+++ I++ ++MDFG+A+ + S
Sbjct: 114 TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 478 ES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
S + +G Y++PE + + DVY +G VL E+
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 215 KTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I +Y S G L L+ ++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 215 KTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 348 GSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G ++AVK+++ K ++ NE+ + +H N+ + +V +E ++ +++ G L
Sbjct: 176 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
++ T ++ + L + L+ LH +H++I S+ IL+ D ++ D
Sbjct: 236 TDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSD 290
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
FG + S E +G ++APE S + + D++ +G++++E+
Sbjct: 291 FGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 341
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 38 KIVDMKRAVDCPENIKK---EICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 95 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 150
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 396 LIYKYMSSGTLYSLLQ-GNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
+I +Y+ G+ LL+ G E T + L +GL +LH + +H++I + +
Sbjct: 98 IIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---KGLDYLHSEKK---IHRDIKAANV 151
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
L+ E D ++ DFG+A +T D N +G ++APE K D++ +G+
Sbjct: 152 LLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGIT 209
Query: 515 LLELA 519
+ELA
Sbjct: 210 AIELA 214
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 8/170 (4%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 39 IVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR 95
Query: 410 LQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGL 469
++ + + P R G+ +LH G H++I +L+DE + +I DFGL
Sbjct: 96 IEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 470 AKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVLLEL 518
A + ++ +N G Y+APE + DV+ G+VL +
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 8/170 (4%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 38 IVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR 94
Query: 410 LQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGL 469
++ + + P R G+ +LH G H++I +L+DE + +I DFGL
Sbjct: 95 IEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGL 150
Query: 470 AKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVLLEL 518
A + ++ +N G Y+APE + DV+ G+VL +
Sbjct: 151 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 200
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 348 GSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G ++AVK+++ K ++ NE+ + +H N+ + +V +E ++ +++ G L
Sbjct: 56 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
++ T ++ + L + L+ LH +H++I S+ IL+ D ++ D
Sbjct: 116 TDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSD 170
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
FG + S E +G ++APE S + + D++ +G++++E+
Sbjct: 171 FGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 221
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 36 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 92
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 93 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 148
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 149 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 348 GSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G ++AVK+++ K ++ NE+ + +H N+ + +V +E ++ +++ G L
Sbjct: 54 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 113
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
++ T ++ + L + L+ LH +H++I S+ IL+ D ++ D
Sbjct: 114 TDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSD 168
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
FG + S E +G ++APE S + + D++ +G++++E+
Sbjct: 169 FGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 219
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 38 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 95 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 150
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 39 IVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR 95
Query: 410 LQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGL 469
++ + + P R G+ +LH G H++I +L+DE + +I DFGL
Sbjct: 96 IEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 470 AKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
A + ++ +N G Y+APE + DV+ G+VL
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 39 IVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR 95
Query: 410 LQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGL 469
++ + + P R G+ +LH G H++I +L+DE + +I DFGL
Sbjct: 96 IEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 470 AKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
A + ++ +N G Y+APE + DV+ G+VL
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I Y S G L L+ ++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 215 KTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 72/167 (43%), Gaps = 8/167 (4%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 39 IVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDR 95
Query: 410 LQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGL 469
++ + + P R G+ +LH G H++I +L+DE + +I DFGL
Sbjct: 96 IEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFGL 151
Query: 470 AKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
A + ++ +N G Y+APE + DV+ G+VL
Sbjct: 152 ATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 348 GSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G ++AVK+++ K ++ NE+ + +H N+ + +V +E ++ +++ G L
Sbjct: 45 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
++ T ++ + L + L+ LH +H++I S+ IL+ D ++ D
Sbjct: 105 TDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSD 159
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
FG S E +G ++APE S + + D++ +G++++E+
Sbjct: 160 FGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 210
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 348 GSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G ++AVK+++ K ++ NE+ + +H N+ + +V +E ++ +++ G L
Sbjct: 49 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 108
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
++ T ++ + L + L+ LH +H++I S+ IL+ D ++ D
Sbjct: 109 TDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSD 163
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
FG S E +G ++APE S + + D++ +G++++E+
Sbjct: 164 FGFCA--QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 214
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 19/177 (10%)
Query: 365 KFRNEMNRLGQLRHPNLAPLLGYCVVEEE------KLLIYKYMSSGTLYSLLQGNATELD 418
+FR E L HP + + Y E E ++ +Y+ TL ++
Sbjct: 58 RFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-- 113
Query: 419 WPTR-FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477
P R + A + L + H Q +H+++ I++ ++MDFG+A+ + S
Sbjct: 114 TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 478 ES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL----AGFKGNLVDWV 529
S + +G Y++PE + + DVY +G VL E+ F G+ D V
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSV 227
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 348 GSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G ++AVK+++ K ++ NE+ + +H N+ + +V +E ++ +++ G L
Sbjct: 99 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
++ T ++ + L + L+ LH +H++I S+ IL+ D ++ D
Sbjct: 159 TDIV--THTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSD 213
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
FG + S E +G ++APE S + + D++ +G++++E+
Sbjct: 214 FGFCAQV--SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV 264
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 37 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 94 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 149
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 150 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 31/173 (17%)
Query: 370 MNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQG-----NATELDWPTRFR 424
M +LG H N+ LLG C + LI++Y G L + L+ + E+++ + R
Sbjct: 102 MTQLGS--HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKR 159
Query: 425 I-----------------GLGAARGLAWLH-HGCQPPFLHQNICSNVILVDEDFDARIMD 466
+ A+G+ +L C +H+++ + +LV +I D
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC----VHRDLAARNVLVTHGKVVKICD 215
Query: 467 FGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
FGLA+ + SD + V G+ ++APE + ++K DV+ G++L E+
Sbjct: 216 FGLARDIM-SDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEI 267
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 8/168 (4%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++ +KR C KK E+ L H N+ G+ + L +Y S G L+
Sbjct: 38 KIVDMKRAVDCPENIKK---EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468
++ + + P R G+ +LH G H++I +L+DE + +I DFG
Sbjct: 95 RIEPDIG-MPEPDAQRFFHQLMAGVVYLH-GIG--ITHRDIKPENLLLDERDNLKISDFG 150
Query: 469 LAKLMTSSDESSFVNGDLGEFGYIAPE-YSSTMVASLKGDVYGIGVVL 515
LA + ++ +N G Y+APE + DV+ G+VL
Sbjct: 151 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 31/173 (17%)
Query: 370 MNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTR------- 422
M+ LGQ H N+ LLG C L+I +Y G L + L+ A + P+
Sbjct: 88 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPE 145
Query: 423 ---------------FRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMD 466
A+G+A+L C +H+++ + +L+ A+I D
Sbjct: 146 GLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGD 201
Query: 467 FGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
FGLA+ + +D + V G+ ++APE V +++ DV+ G++L E+
Sbjct: 202 FGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGN---------------ATELDWPT 421
+H N+ LLG C + +I Y S G L L+ ++ +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 422 RFRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-ES 479
ARG+ +L C +H+++ + +LV E+ +I DFGLA+ + + D
Sbjct: 159 LVSCTYQLARGMEYLASQKC----IHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
NG L ++APE V + + DV+ GV++ E+ G+
Sbjct: 215 KTTNGRL-PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGS 258
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 365 KFRNEMNRLGQLRHPNLAPLLGYCVVEEE------KLLIYKYMSSGTLYSLLQGNATELD 418
+FR E L HP + + Y E E ++ +Y+ TL ++
Sbjct: 58 RFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-- 113
Query: 419 WPTR-FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477
P R + A + L + H Q +H+++ I++ ++MDFG+A+ + S
Sbjct: 114 TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 478 ES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
S + +G Y++PE + + DVY +G VL E+
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 76/166 (45%), Gaps = 24/166 (14%)
Query: 370 MNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL-------------YSLLQGNATE 416
M+ LGQ H N+ LLG C L+I +Y G L YS + E
Sbjct: 103 MSHLGQ--HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPE 160
Query: 417 LDWPTR--FRIGLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473
+R A+G+A+L C +H+++ + +L+ A+I DFGLA+ +
Sbjct: 161 EQLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLARDI 216
Query: 474 TSSDESSFVNGDLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+D + V G+ ++APE V +++ DV+ G++L E+
Sbjct: 217 M-NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 261
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 365 KFRNEMNRLGQLRHPNLAPLLGYCVVEEE------KLLIYKYMSSGTLYSLLQGNATELD 418
+FR E L HP + + Y E E ++ +Y+ TL ++
Sbjct: 58 RFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-- 113
Query: 419 WPTR-FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477
P R + A + L + H Q +H+++ I++ ++MDFG+A+ + S
Sbjct: 114 TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170
Query: 478 ES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
S + +G Y++PE + + DVY +G VL E+
Sbjct: 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 365 KFRNEMNRLGQLRHPNLAPLLGYCVVEEEK------LLIYKYMSSGTLYSLLQGNATELD 418
+FR E L HP + + Y E E ++ +Y+ TL ++
Sbjct: 75 RFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-- 130
Query: 419 WPTR-FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477
P R + A + L + H Q +H+++ I++ ++MDFG+A+ + S
Sbjct: 131 TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 187
Query: 478 ES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
S + +G Y++PE + + DVY +G VL E+
Sbjct: 188 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 229
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 10/181 (5%)
Query: 359 CKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATE 416
C L K KF +E + L HP++ L+G ++EEE +I + G L L+ N
Sbjct: 48 CTLDNKEKFMSEAVIMKNLDHPHIVKLIG--IIEEEPTWIIMELYPYGELGHYLERNKNS 105
Query: 417 LDWPTRFRIGLGAARGLAWLHH-GCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475
L T L + +A+L C +H++I ILV ++ DFGL++ +
Sbjct: 106 LKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIED 161
Query: 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSS 535
D L +++PE + + DV+ V + E+ F W+
Sbjct: 162 EDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
Query: 536 G 536
G
Sbjct: 221 G 221
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 338 GTTYKAMLPD-GSVLAVKRLNTCKLGEKK------FRNEMNRLGQLRHPNLAPLLGYCVV 390
T YKA + ++A+K++ E K E+ L +L HPN+ LL
Sbjct: 24 ATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH 83
Query: 391 EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFR-IGLGAARGLAWLHHGCQPPFLHQNI 449
+ L++ +M + L +++ N+ L P+ + L +GL +LH Q LH+++
Sbjct: 84 KSNISLVFDFMETD-LEVIIKDNSLVLT-PSHIKAYMLMTLQGLEYLH---QHWILHRDL 138
Query: 450 CSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE--YSSTMVASLKGD 507
N +L+DE+ ++ DFGLAK S + + + Y APE + + M + D
Sbjct: 139 KPNNLLLDENGVLKLADFGLAKSFGSPNRA--YXHQVVTRWYRAPELLFGARMYG-VGVD 195
Query: 508 VYGIGVVLLEL 518
++ +G +L EL
Sbjct: 196 MWAVGCILAEL 206
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 96/201 (47%), Gaps = 37/201 (18%)
Query: 351 LAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYKYMS 402
+AVK+L+ + ++ E+ L L+H N+ LL + + ++ + +
Sbjct: 56 VAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM 115
Query: 403 SGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDA 462
L ++++ A D +F + RGL ++H +H+++ + + V+ED +
Sbjct: 116 GADLNNIVKSQALS-DEHVQFLV-YQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSEL 170
Query: 463 RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-------YSSTMVASLKGDVYGIGVVL 515
RI+DFGLA+ +DE + G + Y APE Y+ T+ D++ +G ++
Sbjct: 171 RILDFGLAR---QADEE--MTGYVATRWYRAPEIMLNWMHYNQTV------DIWSVGCIM 219
Query: 516 LEL----AGFKGNLVDWVNQL 532
EL A F G+ D+++QL
Sbjct: 220 AELLQGKALFPGS--DYIDQL 238
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 10/175 (5%)
Query: 359 CKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATE 416
C L K KF +E + L HP++ L+G ++EEE +I + G L L+ N
Sbjct: 64 CTLDNKEKFMSEAVIMKNLDHPHIVKLIG--IIEEEPTWIIMELYPYGELGHYLERNKNS 121
Query: 417 LDWPTRFRIGLGAARGLAWLHH-GCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475
L T L + +A+L C +H++I ILV ++ DFGL++ +
Sbjct: 122 LKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIED 177
Query: 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVN 530
D L +++PE + + DV+ V + E+ F W+
Sbjct: 178 EDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 231
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 18/181 (9%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
++ ++R N +L K F+ E+ Q RH N+ +G C+ +I TLYS+
Sbjct: 62 LIDIERDNEDQL--KAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSV 119
Query: 410 LQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGL 469
++ LD +I +G+ +LH LH+++ S + D + I DFGL
Sbjct: 120 VRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGL 175
Query: 470 ---AKLMTSSDESSFVNGDLGEFGYIAPEY---------SSTMVASLKGDVYGIGVVLLE 517
+ ++ + + G ++APE + S DV+ +G + E
Sbjct: 176 FSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYE 235
Query: 518 L 518
L
Sbjct: 236 L 236
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 15/107 (14%)
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFG 490
RGL ++H +H+++ + + V+ED + RI+DFGLA+ +DE + G +
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR---QADEE--MTGYVATRW 185
Query: 491 YIAPEYS-STMVASLKGDVYGIGVVLLEL----AGFKGNLVDWVNQL 532
Y APE + M + D++ +G ++ EL A F G+ D+++QL
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGS--DYIDQL 230
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 10/181 (5%)
Query: 359 CKLGEK-KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATE 416
C L K KF +E + L HP++ L+G ++EEE +I + G L L+ N
Sbjct: 52 CTLDNKEKFMSEAVIMKNLDHPHIVKLIG--IIEEEPTWIIMELYPYGELGHYLERNKNS 109
Query: 417 LDWPTRFRIGLGAARGLAWLHH-GCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475
L T L + +A+L C +H++I ILV ++ DFGL++ +
Sbjct: 110 LKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIED 165
Query: 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSS 535
D L +++PE + + DV+ V + E+ F W+
Sbjct: 166 EDYYKASVTRL-PIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
Query: 536 G 536
G
Sbjct: 225 G 225
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 27/113 (23%)
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFG 490
RGL ++H +H+++ + + V+ED + RI+DFGLA+ +DE + G +
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR---QADEE--MTGYVATRW 193
Query: 491 YIAPE-------YSSTMVASLKGDVYGIGVVLLEL----AGFKGNLVDWVNQL 532
Y APE Y+ T+ D++ +G ++ EL A F G+ D+++QL
Sbjct: 194 YRAPEIMLNWMHYNQTV------DIWSVGCIMAELLQGKALFPGS--DYIDQL 238
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 23/192 (11%)
Query: 338 GTTYKAMLPD-GSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393
G +K D G ++A+K+ + + +K E+ L QL+HPNL LL +
Sbjct: 17 GVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRR 76
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRF--RIGLGAARGLAWLH-HGCQPPFLHQNIC 450
L+++Y L+ L + + P I + + + H H C +H+++
Sbjct: 77 LHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSITWQTLQAVNFCHKHNC----IHRDVK 129
Query: 451 SNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKG---- 506
IL+ + ++ DFG A+L+T S + + ++ Y +PE +V +
Sbjct: 130 PENILITKHSVIKLCDFGFARLLTGP--SDYYDDEVATRWYRSPE---LLVGDTQYGPPV 184
Query: 507 DVYGIGVVLLEL 518
DV+ IG V EL
Sbjct: 185 DVWAIGCVFAEL 196
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 20/203 (9%)
Query: 322 ASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRN-EMNRLGQLRHPN 380
+ SF ++I S G Y ++ +K+ +L + + N E L + HP
Sbjct: 15 GTGSFGRVHLIRSRHNGRYY-------AMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 381 LAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGC 440
+ + G ++ +I Y+ G L+SLL+ + P L +LH
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLR-KSQRFPNPVAKFYAAEVCLALEYLHSKD 126
Query: 441 QPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL-GEFGYIAPEYSST 499
+++++ IL+D++ +I DFG AK + V L G YIAPE ST
Sbjct: 127 ---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD------VTYXLCGTPDYIAPEVVST 177
Query: 500 MVASLKGDVYGIGVVLLE-LAGF 521
+ D + G+++ E LAG+
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGY 200
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 11/171 (6%)
Query: 352 AVKRLNTCKLGEK-KFRNEMNR--LGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLY 407
A+K L L + + R +M R L ++ HP + L Y E KL LI ++ G L+
Sbjct: 56 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF 114
Query: 408 SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDF 467
+ L + +F + A LA L H +++++ IL+DE+ ++ DF
Sbjct: 115 TRLSKEVMFTEEDVKFYL---AELALA-LDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 170
Query: 468 GLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
GL+K S D G Y+APE + + D + GV++ E+
Sbjct: 171 GLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 11/171 (6%)
Query: 352 AVKRLNTCKLGEK-KFRNEMNR--LGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLY 407
A+K L L + + R +M R L ++ HP + L Y E KL LI ++ G L+
Sbjct: 57 AMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLF 115
Query: 408 SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDF 467
+ L + +F + A LA L H +++++ IL+DE+ ++ DF
Sbjct: 116 TRLSKEVMFTEEDVKFYL---AELALA-LDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 171
Query: 468 GLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
GL+K S D G Y+APE + + D + GV++ E+
Sbjct: 172 GLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 220
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 78/174 (44%), Gaps = 11/174 (6%)
Query: 349 SVLAVKRLNTCKLGEK-KFRNEMNR--LGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSG 404
+ A+K L L + + R +M R L ++ HP + L Y E KL LI ++ G
Sbjct: 53 QLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGG 111
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464
L++ L + +F + A LA L H +++++ IL+DE+ ++
Sbjct: 112 DLFTRLSKEVMFTEEDVKFYL---AELALA-LDHLHSLGIIYRDLKPENILLDEEGHIKL 167
Query: 465 MDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
DFGL+K S D G Y+APE + + D + GV++ E+
Sbjct: 168 TDFGLSK--ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEM 219
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 15/162 (9%)
Query: 365 KFRNEMNRLGQLRHPNLAPLLGYCVVEEE------KLLIYKYMSSGTLYSLLQGNATELD 418
+FR E L HP + + Y E E ++ +Y+ TL ++
Sbjct: 58 RFRREAQNAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM-- 113
Query: 419 WPTR-FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477
P R + A + L + H Q +H+++ IL+ +++DFG+A+ + S
Sbjct: 114 TPKRAIEVIADACQALNFSH---QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSG 170
Query: 478 ESSFVNGD-LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
S +G Y++PE + + DVY +G VL E+
Sbjct: 171 NSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEV 212
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 27/192 (14%)
Query: 345 LPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR----HPNLAPLLGYCVVE----EEKLL 396
L DG A+KR+ C E++ R E R + HPN+ L+ YC+ E E L
Sbjct: 51 LHDGHFYALKRI-LCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107
Query: 397 IYKYMSSGTLYSLLQGNATELDWPTRFRI---GLGAARGLAWLHHGCQPPFLHQNICSNV 453
+ + GTL++ ++ + ++ T +I LG RGL +H + H+++
Sbjct: 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTN 164
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFG-------YIAPEYSSTM---VAS 503
IL+ ++ +MD G E S L ++ Y APE S V
Sbjct: 165 ILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVID 224
Query: 504 LKGDVYGIGVVL 515
+ DV+ +G VL
Sbjct: 225 ERTDVWSLGCVL 236
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 14/134 (10%)
Query: 446 HQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLK 505
H+++ ILV D A ++DFG+A T + N +G Y APE S A+ +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGN-TVGTLYYXAPERFSESHATYR 215
Query: 506 GDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNC 565
D+Y + VL E G+ +QLS G I++A+ + + VA +
Sbjct: 216 ADIYALTCVLYEC--LTGSPPYQGDQLSVXG---AHINQAIPRP---STVRPGIPVAFDA 267
Query: 566 VVSR-----PKDRW 574
V++R P+DR+
Sbjct: 268 VIARGXAKNPEDRY 281
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/246 (18%), Positives = 97/246 (39%), Gaps = 17/246 (6%)
Query: 345 LPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH---PNLAPLLGYCVVEEEKLLIYKYM 401
+P G ++AVKR+ +++ R M+ +R P G E + + + M
Sbjct: 73 VPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 132
Query: 402 SSG--TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
+ Y + + +I + + L LH +H+++ + +L++
Sbjct: 133 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINAL 190
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMV----ASLKGDVYGIGVVL 515
++ DFG++ + S + D G Y+APE + + S+K D++ +G+ +
Sbjct: 191 GQVKMCDFGISGYLVDSVAKTI---DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 247
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
+ELA + W + E L + E + F C+ K+R +
Sbjct: 248 IELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDF---TSQCLKKNSKERPT 304
Query: 576 MYQVYQ 581
++ Q
Sbjct: 305 YPELMQ 310
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPAFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYC--VVEEEKLLIYKYMSSGTLYSLLQGNATELDWPT 421
++ E+ L +L HPN+ L+ E+ ++++ ++ G + + D
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQ-A 139
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481
RF +G+ +LH+ +H++I + +LV ED +I DFG++ SD +
Sbjct: 140 RFYFQ-DLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD--AL 193
Query: 482 VNGDLGEFGYIAPEYSSTMVASLKG---DVYGIGVVL 515
++ +G ++APE S G DV+ +GV L
Sbjct: 194 LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 65/156 (41%), Gaps = 8/156 (5%)
Query: 363 EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTR 422
E + R E+ L HPN+ L Y LI +Y G LY LQ + T D
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT-FDEQRT 125
Query: 423 FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV 482
I A L + HG + +H++I +L+ + +I DFG + S +
Sbjct: 126 ATIMEELADALMYC-HGKK--VIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC 182
Query: 483 NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
G Y+ PE + + K D++ IGV+ EL
Sbjct: 183 ----GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYEL 214
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 76 GLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVT 135
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 136 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 190
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE + M ++ D++ +G ++ EL
Sbjct: 191 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAEL 245
Query: 519 AG----FKGNLVDWVNQLSSSGR 537
F G D +NQL R
Sbjct: 246 LTGRTLFPG--TDHINQLQQIMR 266
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
TG Y A R C+ ++ E++ L Q+ HPN+ L + +L
Sbjct: 36 TGLEYAAKFIKKRQSRASRRGVCR---EEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92
Query: 397 IYKYMSSGTLYSLL-QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVI 454
I + +S G L+ L Q + + T F + G+ +LH H ++ N++
Sbjct: 93 ILELVSGGELFDFLAQKESLSEEEATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIM 147
Query: 455 LVDEDF---DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGI 511
L+D++ +++DFGLA + D F N G ++APE + L+ D++ I
Sbjct: 148 LLDKNIPIPHIKLIDFGLAHEI--EDGVEFKNI-FGTPEFVAPEIVNYEPLGLEADMWSI 204
Query: 512 GVV 514
GV+
Sbjct: 205 GVI 207
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 338 GTTYKAMLPDGSV-LAVKRLN-TCKLGEKK-FRNEMNRLGQL-RHPNLAPLLGYCVVEEE 393
T Y + D ++ +AVK L + L E++ +E+ L L H N+ LLG C +
Sbjct: 65 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 124
Query: 394 KLLIYKYMSSGTLYSLLQGNATEL-----------------DWPTRFRIGLGAARGLAWL 436
L+I +Y G L + L+ D A+G+A+L
Sbjct: 125 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 184
Query: 437 -HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAP 494
C +H+++ + IL+ +I DFGLA+ + +D + V G+ ++AP
Sbjct: 185 ASKNC----IHRDLAARNILLTHGRITKICDFGLARHI-KNDSNYVVKGNARLPVKWMAP 239
Query: 495 EYSSTMVASLKGDVYGIGVVLLEL 518
E V + + DV+ G+ L EL
Sbjct: 240 ESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 338 GTTYKAMLPDGSV-LAVKRLN-TCKLGEKK-FRNEMNRLGQL-RHPNLAPLLGYCVVEEE 393
T Y + D ++ +AVK L + L E++ +E+ L L H N+ LLG C +
Sbjct: 58 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 117
Query: 394 KLLIYKYMSSGTLYSLLQGNATEL-----------------DWPTRFRIGLGAARGLAWL 436
L+I +Y G L + L+ D A+G+A+L
Sbjct: 118 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 177
Query: 437 -HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAP 494
C +H+++ + IL+ +I DFGLA+ + +D + V G+ ++AP
Sbjct: 178 ASKNC----IHRDLAARNILLTHGRITKICDFGLARDI-KNDSNYVVKGNARLPVKWMAP 232
Query: 495 EYSSTMVASLKGDVYGIGVVLLEL 518
E V + + DV+ G+ L EL
Sbjct: 233 ESIFNCVYTFESDVWSYGIFLWEL 256
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS--LLQGNATELDWPTRF 423
NE+ L +++H N+ L L+ + +S G L+ L +G TE D
Sbjct: 53 LENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVI 112
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDARIM--DFGLAKLMTSSDESS 480
+ L A + +LH +H+++ N++ + + +++IM DFGL+K+ +++
Sbjct: 113 QQVLSAVK---YLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNG 162
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
++ G GY+APE + S D + IGV+
Sbjct: 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEK--LLIYKYMSSGTLYSLLQGNATELDWPTRFRI 425
NE++ L L HPN+ L V E++K L+ ++ G L+ + N + D I
Sbjct: 95 NEISLLKSLDHPNIIKLFD--VFEDKKYFYLVTEFYEGGELFEQII-NRHKFDECDAANI 151
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICSNVILVDED---FDARIMDFGLAKLMTSSDESSFV 482
G+ +LH + +H++I IL++ + +I+DFGL+ + + +
Sbjct: 152 MKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK---L 205
Query: 483 NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
LG YIAPE K DV+ GV++
Sbjct: 206 RDRLGTAYYIAPEVLKKKYNE-KCDVWSCGVIM 237
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 338 GTTYKAMLPDGSV-LAVKRLN-TCKLGEKK-FRNEMNRLGQL-RHPNLAPLLGYCVVEEE 393
T Y + D ++ +AVK L + L E++ +E+ L L H N+ LLG C +
Sbjct: 60 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 119
Query: 394 KLLIYKYMSSGTLYSLLQGNATEL-----------------DWPTRFRIGLGAARGLAWL 436
L+I +Y G L + L+ D A+G+A+L
Sbjct: 120 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 179
Query: 437 -HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAP 494
C +H+++ + IL+ +I DFGLA+ + +D + V G+ ++AP
Sbjct: 180 ASKNC----IHRDLAARNILLTHGRITKICDFGLARDI-KNDSNYVVKGNARLPVKWMAP 234
Query: 495 EYSSTMVASLKGDVYGIGVVLLEL 518
E V + + DV+ G+ L EL
Sbjct: 235 ESIFNCVYTFESDVWSYGIFLWEL 258
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 34 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 88
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 89 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 141
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 142 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 195
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 196 EADMWSIGVI 205
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 34 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 88
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 89 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 141
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 142 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 195
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 196 EADMWSIGVI 205
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 338 GTTYKAMLPDGSV-LAVKRLN-TCKLGEKK-FRNEMNRLGQL-RHPNLAPLLGYCVVEEE 393
T Y + D ++ +AVK L + L E++ +E+ L L H N+ LLG C +
Sbjct: 42 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101
Query: 394 KLLIYKYMSSGTLYSLLQGNATEL-----------------DWPTRFRIGLGAARGLAWL 436
L+I +Y G L + L+ D A+G+A+L
Sbjct: 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 161
Query: 437 -HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAP 494
C +H+++ + IL+ +I DFGLA+ + +D + V G+ ++AP
Sbjct: 162 ASKNC----IHRDLAARNILLTHGRITKICDFGLARDI-KNDSNYVVKGNARLPVKWMAP 216
Query: 495 EYSSTMVASLKGDVYGIGVVLLEL 518
E V + + DV+ G+ L EL
Sbjct: 217 ESIFNCVYTFESDVWSYGIFLWEL 240
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 28/204 (13%)
Query: 338 GTTYKAMLPDGSV-LAVKRLN-TCKLGEKK-FRNEMNRLGQL-RHPNLAPLLGYCVVEEE 393
T Y + D ++ +AVK L + L E++ +E+ L L H N+ LLG C +
Sbjct: 65 ATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 124
Query: 394 KLLIYKYMSSGTLYSLLQGNATEL-----------------DWPTRFRIGLGAARGLAWL 436
L+I +Y G L + L+ D A+G+A+L
Sbjct: 125 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL 184
Query: 437 -HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAP 494
C +H+++ + IL+ +I DFGLA+ + +D + V G+ ++AP
Sbjct: 185 ASKNC----IHRDLAARNILLTHGRITKICDFGLARDI-KNDSNYVVKGNARLPVKWMAP 239
Query: 495 EYSSTMVASLKGDVYGIGVVLLEL 518
E V + + DV+ G+ L EL
Sbjct: 240 ESIFNCVYTFESDVWSYGIFLWEL 263
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 20/194 (10%)
Query: 338 GTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNE-------MNRLGQLRHPNLAPLLGYCV 389
GT YKA P G +A+K + GE+ + RL HPN+ L+ C
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 76
Query: 390 V-----EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPF 444
E + L+++++ L + L T + RGL +LH C
Sbjct: 77 TSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---I 133
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ ILV ++ DFGLA++ + + V L Y APE +
Sbjct: 134 VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTL---WYRAPEVLLQSTYAT 190
Query: 505 KGDVYGIGVVLLEL 518
D++ +G + E+
Sbjct: 191 PVDMWSVGCIFAEM 204
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++S + T + P +GLA+ H LH+++
Sbjct: 80 LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPEN 136
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 189
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 190 IWSLGCIFAEMV 201
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILILELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++S + T + P +GLA+ H LH+++
Sbjct: 78 LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPEN 134
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 187
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 188 IWSLGCIFAEMV 199
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 394 KLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
L+++++S L + +A T + P +GLA+ H LH+++
Sbjct: 79 LYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQ 134
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 135 NLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV----- 187
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 188 DIWSLGCIFAEMV 200
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 74/188 (39%), Gaps = 27/188 (14%)
Query: 355 RLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE--EKLL-----IYKYMS----- 402
RL +L +K E+ L +L HP + + + EKL +Y Y+
Sbjct: 39 RLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCR 98
Query: 403 SGTLYSLLQGNAT--ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF 460
L + G T E + I L A + +LH +H+++ + I D
Sbjct: 99 KENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDD 155
Query: 461 DARIMDFGLAKLMTSSDESSFV----------NGDLGEFGYIAPEYSSTMVASLKGDVYG 510
++ DFGL M +E V G +G Y++PE S K D++
Sbjct: 156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFS 215
Query: 511 IGVVLLEL 518
+G++L EL
Sbjct: 216 LGLILFEL 223
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 20/194 (10%)
Query: 338 GTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNE-------MNRLGQLRHPNLAPLLGYCV 389
GT YKA P G +A+K + GE+ + RL HPN+ L+ C
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 76
Query: 390 V-----EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPF 444
E + L+++++ L + L T + RGL +LH C
Sbjct: 77 TSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---I 133
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ ILV ++ DFGLA++ + ++ + Y APE +
Sbjct: 134 VHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALDPVVVTLWYRAPEVLLQSTYAT 190
Query: 505 KGDVYGIGVVLLEL 518
D++ +G + E+
Sbjct: 191 PVDMWSVGCIFAEM 204
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 394 KLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
L+++++S L + +A T + P +GLA+ H LH+++
Sbjct: 80 LYLVFEFLSMD-LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQ 135
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV----- 188
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 189 DIWSLGCIFAEMV 201
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 131 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + + ++ LY LL+ D F
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 151 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 346 PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH----PNLAPLLGYCVVEEEKLLIYKYM 401
P G ++AVKR+ + + EK+ + + L + P + G E + + + M
Sbjct: 45 PSGQIMAVKRIRST-VDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELM 103
Query: 402 SSG------TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
S+ +YS+L E +I L + L L + +H++I + IL
Sbjct: 104 STSFDKFYKYVYSVLDDVIPE---EILGKITLATVKALNHLKENLK--IIHRDIKPSNIL 158
Query: 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY----SSTMVASLKGDVYGI 511
+D + ++ DFG++ + S + D G Y+APE +S ++ DV+ +
Sbjct: 159 LDRSGNIKLCDFGISGQLVDSIAKT---RDAGCRPYMAPERIDPSASRQGYDVRSDVWSL 215
Query: 512 GVVLLELAGFKGNLVDW 528
G+ L ELA + W
Sbjct: 216 GITLYELATGRFPYPKW 232
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLG-EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 131
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV----- 184
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 133
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV-----D 186
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 187 IWSLGCIFAEMV 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 132
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV----- 185
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 394 KLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
L+++++ L + + +A T + P +GLA+ H LH+++
Sbjct: 80 LYLVFEFLHQD-LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQ 135
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 136 NLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV----- 188
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 189 DIWSLGCIFAEMV 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 131
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV----- 184
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 83/190 (43%), Gaps = 30/190 (15%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLG--EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
TG Y A + +R + + G + E++ L +++HPN+ L + +
Sbjct: 35 TGLQYAAKF-----IKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89
Query: 395 LLIYKYMSSGTLY-------SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQ 447
+LI + ++ G L+ SL + ATE + + G+ L H +P
Sbjct: 90 ILIGELVAGGELFDFLAEKESLTEEEATE--FLKQILNGVYYLHSLQIAHFDLKP----- 142
Query: 448 NICSNVILVDEDFDA---RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
N++L+D + +I+DFGLA + +E + G ++APE + L
Sbjct: 143 ---ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNI---FGTPEFVAPEIVNYEPLGL 196
Query: 505 KGDVYGIGVV 514
+ D++ IGV+
Sbjct: 197 EADMWSIGVI 206
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 78 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 134
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV-----D 187
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 188 IWSLGCIFAEMV 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLG-EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 24 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 83
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 84 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 139
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 140 NLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV----- 192
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 193 DIWSLGCIFAEMV 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 132
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGXKYYSTAV----- 185
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 21 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 80
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 81 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 137
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 138 LLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV-----D 190
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 191 IWSLGCIFAEMV 202
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 131 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPN---LAPLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N + +L +E + + I + + LY LL+ D F
Sbjct: 91 EIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFL 150
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 151 YQI--LRGLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLT 205
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 96/225 (42%), Gaps = 17/225 (7%)
Query: 363 EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL--QGNATELDWP 420
+K R E+ L +L HPN+ L E L+ + ++ G L+ + +G +E D
Sbjct: 92 KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA 151
Query: 421 TRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDA--RIMDFGLAKLMTSSD 477
+ L A +A+LH +H+++ N++ DA +I DFGL+K++ +
Sbjct: 152 DAVKQILEA---VAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---E 202
Query: 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV-LLELAGFKGNLVDWVNQLSSSG 536
+ G GY APE + D++ +G++ + L GF+ + +Q
Sbjct: 203 HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMF-- 260
Query: 537 RSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQ 581
R + +DE L + +V PK R + +Q Q
Sbjct: 261 RRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 83/173 (47%), Gaps = 8/173 (4%)
Query: 348 GSVLAVKRLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406
G +AVK ++ K ++ NE+ + +H N+ + +V EE ++ +++ G L
Sbjct: 70 GRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL 129
Query: 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466
++ + L+ + + LA+LH +H++I S+ IL+ D ++ D
Sbjct: 130 TDIV--SQVRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSD 184
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELA 519
FG + S + +G ++APE S + + + D++ +G++++E+
Sbjct: 185 FGFCAQI--SKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV 235
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 24 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 83
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 84 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 139
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 140 NLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGXKYYSTAV----- 192
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 193 DIWSLGCIFAEMV 205
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 135 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 135 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 136 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 394 KLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
L+++++ L + + +A T + P +GLA+ H LH+++
Sbjct: 76 LYLVFEHVHQD-LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQ 131
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV----- 184
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 135 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 131 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 78/196 (39%), Gaps = 21/196 (10%)
Query: 338 GTTYKAMLP-DGSVLAVKRLNT---------CKLGEKKFRNEMNRLGQLRHPNLAPLLGY 387
GT YKA P G +A+K + + + + RL HPN+ L+
Sbjct: 23 GTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDV 82
Query: 388 CVV-----EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQP 442
C E + L+++++ L + L T + RGL +LH C
Sbjct: 83 CATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC-- 140
Query: 443 PFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVA 502
+H+++ ILV ++ DFGLA++ + + V L Y APE
Sbjct: 141 -IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTL---WYRAPEVLLQSTY 196
Query: 503 SLKGDVYGIGVVLLEL 518
+ D++ +G + E+
Sbjct: 197 ATPVDMWSVGCIFAEM 212
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLG-EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 78 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 134
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 187
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 188 IWSLGCIFAEMV 199
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 79 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 135
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 188
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 189 IWSLGCIFAEMV 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLG-EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 131
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV----- 184
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLG-EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 132
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV----- 185
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 80 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 136
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 189
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 190 IWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 79 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 135
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 188
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 189 IWSLGCIFAEMV 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 132
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV----- 185
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLG-EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 133
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 134 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 186
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 187 IWSLGCIFAEMV 198
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 132
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV----- 185
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 131
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV----- 184
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 80 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 136
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 189
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 190 IWSLGCIFAEMV 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLG-EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 78 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 133
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 134 NLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV----- 186
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 187 DIWSLGCIFAEMV 199
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 131 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 78/194 (40%), Gaps = 20/194 (10%)
Query: 338 GTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNE-------MNRLGQLRHPNLAPLLGYCV 389
GT YKA P G +A+K + GE+ + RL HPN+ L+ C
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPN-GEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCA 76
Query: 390 V-----EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPF 444
E + L+++++ L + L T + RGL +LH C
Sbjct: 77 TSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---I 133
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASL 504
+H+++ ILV ++ DFGLA++ + V L Y APE +
Sbjct: 134 VHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTL---WYRAPEVLLQSTYAT 190
Query: 505 KGDVYGIGVVLLEL 518
D++ +G + E+
Sbjct: 191 PVDMWSVGCIFAEM 204
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 78 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPEN 134
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 135 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 187
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 188 IWSLGCIFAEMV 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 79 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPEN 135
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 136 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 188
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 189 IWSLGCIFAEMV 200
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 133 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 135 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 21 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 80
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 81 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 137
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 138 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 190
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 191 IWSLGCIFAEMV 202
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 135
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 136 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 226
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQ-GNATELDWPTRFRIGL 427
E++ L L+H N+ L E+ L+++Y+ L GN + F L
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQL 109
Query: 428 GAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
RGLA+ H + LH+++ +L++E + ++ DFGLA+ S + + ++
Sbjct: 110 --LRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLAR--AKSIPTKTYDNEVV 162
Query: 488 EFGYIAPE-YSSTMVASLKGDVYGIGVVLLELAG----FKGNLVD 527
Y P+ + S + D++G+G + E+A F G+ V+
Sbjct: 163 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE 207
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 136
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 137 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 227
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 127
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 128 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 218
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 134
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 135 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 129 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 128
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 129 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 219
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/236 (19%), Positives = 94/236 (39%), Gaps = 32/236 (13%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELD--WPT 421
+ F + + +L H +L G C +E +L+ +++ G+L + L+ N ++ W
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW-- 114
Query: 422 RFRIGLGAARGLAWLHHGCQP-PFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480
L A+ LAW H + +H N+C+ IL+ + D + + KL +
Sbjct: 115 ----KLEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISIT 170
Query: 481 FVNGDLGE--FGYIAPE-YSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGR 537
+ D+ + ++ PE + +L D + G L E+ S +
Sbjct: 171 VLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC-------------SGGDK 217
Query: 538 SKEAIDKALCGKGYDE-------EILQFLKVACNCVVSRPKDRWSMYQVYQSLNSI 586
A+D + Y++ + + + NC+ P R S + + LNS+
Sbjct: 218 PLSALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLG-EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 394 KLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSN 452
L+++++ L + +A T + P +GLA+ H LH+++
Sbjct: 77 LYLVFEFLHQD-LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPE 132
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV----- 185
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 150
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 151 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 241
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 138
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 139 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 229
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 130
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 131 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 221
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L + RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFL 134
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 135 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 225
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
++A+K L +L E + R E+ LRHPN+ + Y + L+ ++ G
Sbjct: 41 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 100
Query: 406 LYSLLQ--GNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463
LY LQ G E T F L A LH+ + +H++I +L+ + +
Sbjct: 101 LYKELQKHGRFDEQRSAT-FMEELADA-----LHYCHERKVIHRDIKPENLLMGYKGELK 154
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
I DFG + S G Y+ PE K D++ GV+ E
Sbjct: 155 IADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ A D +F I RGL ++H +H+++ + + V+ED
Sbjct: 103 HLMGADLNNIVKC-AKLTDDHVQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 157
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE + M + D++ +G ++ EL
Sbjct: 158 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 213 LTGRTLFPGT--DHIDQL 228
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
++A+K L +L E + R E+ LRHPN+ + Y + L+ ++ G
Sbjct: 42 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 101
Query: 406 LYSLLQ--GNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463
LY LQ G E T F L A LH+ + +H++I +L+ + +
Sbjct: 102 LYKELQKHGRFDEQRSAT-FMEELADA-----LHYCHERKVIHRDIKPENLLMGYKGELK 155
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
I DFG + S G Y+ PE K D++ GV+ E
Sbjct: 156 IADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 206
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 439 GCQPPFLHQNICSNV------ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYI 492
GCQ +LH+N + + ++ED + +I DFGLA + E V G YI
Sbjct: 153 GCQ--YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYI 208
Query: 493 APEYSSTMVASLKGDVYGIGVVLLEL 518
APE S S + DV+ IG ++ L
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCIMYTL 234
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE + M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/246 (18%), Positives = 95/246 (38%), Gaps = 17/246 (6%)
Query: 345 LPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH---PNLAPLLGYCVVEEEKLLIYKYM 401
+P G ++AVKR+ +++ R M+ +R P G E + + + M
Sbjct: 29 VPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELM 88
Query: 402 SSG--TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
+ Y + + +I + + L LH +H+++ + +L++
Sbjct: 89 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINAL 146
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMV----ASLKGDVYGIGVVL 515
++ DFG++ + D G Y+APE + + S+K D++ +G+ +
Sbjct: 147 GQVKMCDFGISGYLVDDVAKDI---DAGCKPYMAPERINPELNQKGYSVKSDIWSLGITM 203
Query: 516 LELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575
+ELA + W + E L + E + F C+ K+R +
Sbjct: 204 IELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDF---TSQCLKKNSKERPT 260
Query: 576 MYQVYQ 581
++ Q
Sbjct: 261 YPELMQ 266
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 16/175 (9%)
Query: 350 VLAVKRLNTCKLG----EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
++A+K L +L E + R E+ LRHPN+ + Y + L+ ++ G
Sbjct: 41 IMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGE 100
Query: 406 LYSLLQ--GNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463
LY LQ G E T F L A LH+ + +H++I +L+ + +
Sbjct: 101 LYKELQKHGRFDEQRSAT-FMEELADA-----LHYCHERKVIHRDIKPENLLMGYKGELK 154
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
I DFG + S G Y+ PE K D++ GV+ E
Sbjct: 155 IADFGWSVHAPSLRRRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF 205
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 439 GCQPPFLHQNICSNV------ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYI 492
GCQ +LH+N + + ++ED + +I DFGLA + E V G YI
Sbjct: 151 GCQ--YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYI 206
Query: 493 APEYSSTMVASLKGDVYGIGVVLLEL 518
APE S S + DV+ IG ++ L
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCIMYTL 232
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLG-EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453
L+++++ + T + P +GLA+ H LH+++
Sbjct: 80 LYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQN 136
Query: 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKGD 507
+L++ + ++ DFGLA+ + ++ Y APE Y ST V D
Sbjct: 137 LLINTEGAIKLADFGLARAFGVPVRT--YXHEVVTLWYRAPEILLGCKYYSTAV-----D 189
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 190 IWSLGCIFAEMV 201
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 110/268 (41%), Gaps = 21/268 (7%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEK--KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395
G YKA + LA ++ K E+ + E+ L HP + LLG + +
Sbjct: 25 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 84
Query: 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
++ ++ G + +++ L P + L +LH +H+++ + +L
Sbjct: 85 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVL 141
Query: 456 VDEDFDARIMDFGLA--KLMTSSDESSFVNGDLGEFGYIAPEYS--STMVAS---LKGDV 508
+ + D R+ DFG++ L T SF+ G ++APE TM + K D+
Sbjct: 142 MTLEGDIRLADFGVSAKNLKTLQKRDSFI----GTPYWMAPEVVMCETMKDTPYDYKADI 197
Query: 509 YGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVS 568
+ +G+ L+E+A + + +K L + E FLK+A +
Sbjct: 198 WSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALD---K 254
Query: 569 RPKDRWSMYQVYQS--LNSIAAQHGFSE 594
P+ R S Q+ + ++SI + E
Sbjct: 255 NPETRPSAAQLLEHPFVSSITSNKALRE 282
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 16/133 (12%)
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+Y +GTLY L+ +R+ L+++H +H+++ I +DE
Sbjct: 95 EYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDE 151
Query: 459 DFDARIMDFGLAKLMTSSDE------------SSFVNGDLGEFGYIAPEY-SSTMVASLK 505
+ +I DFGLAK + S + S + +G Y+A E T + K
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEK 211
Query: 506 GDVYGIGVVLLEL 518
D+Y +G++ E+
Sbjct: 212 IDMYSLGIIFFEM 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 133 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+K RL+T G E++ L +L HPN+ LL E +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GL++ H H LH+++
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRV----LHRDLKPQ 132
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV----- 185
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 348 GSVLAVKRLNTCKLGEKKFRN---EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSG 404
G A K +NT KL + F+ E +L+HPN+ L E L++ ++ G
Sbjct: 54 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 113
Query: 405 TLYSLLQGNA--TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFD 461
L+ + +E D + L +A+ H +H+N+ N++L +
Sbjct: 114 ELFEDIVAREFYSEADASHCIQQIL---ESIAYCHSNG---IVHRNLKPENLLLASKAKG 167
Query: 462 A--RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
A ++ DFGLA ++S +G G GY++PE S D++ GV+L
Sbjct: 168 AAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 220
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 430 ARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEF 489
A+ ++ L H Q +++++ +L+D+D + RI D GLA + + + G G
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTP 353
Query: 490 GYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKG 523
G++APE D + +GV L E+ +G
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 430 ARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEF 489
A+ ++ L H Q +++++ +L+D+D + RI D GLA + + + G G
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTP 353
Query: 490 GYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKG 523
G++APE D + +GV L E+ +G
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 430 ARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEF 489
A+ ++ L H Q +++++ +L+D+D + RI D GLA + + + G G
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTP 353
Query: 490 GYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKG 523
G++APE D + +GV L E+ +G
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 430 ARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEF 489
A+ ++ L H Q +++++ +L+D+D + RI D GLA + + + G G
Sbjct: 296 AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT--KGYAGTP 353
Query: 490 GYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKG 523
G++APE D + +GV L E+ +G
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 85/194 (43%), Gaps = 16/194 (8%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGEK--KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395
G YKA + LA ++ K E+ + E+ L HP + LLG + +
Sbjct: 33 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLW 92
Query: 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
++ ++ G + +++ L P + L +LH +H+++ + +L
Sbjct: 93 IMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVL 149
Query: 456 VDEDFDARIMDFGLA--KLMTSSDESSFVNGDLGEFGYIAPEYS--STMVAS---LKGDV 508
+ + D R+ DFG++ L T SF+ G ++APE TM + K D+
Sbjct: 150 MTLEGDIRLADFGVSAKNLKTLQKRDSFI----GTPYWMAPEVVMCETMKDTPYDYKADI 205
Query: 509 YGIGVVLLELAGFK 522
+ +G+ L+E+A +
Sbjct: 206 WSLGITLIEMAQIE 219
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 18/187 (9%)
Query: 346 PDGSVLAVKRLN--TCKLGEKKF-RNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMS 402
P G + V+R+N C F + E++ HPN+ P + + E ++ +M+
Sbjct: 34 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 93
Query: 403 SGTLYSLLQGNATELDWPTRFRIGL---GAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
G+ L+ + +D I G + L ++HH ++H+++ ++ IL+ D
Sbjct: 94 YGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVD 148
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFG-----YIAPEYSSTMVASL--KGDVYGIG 512
+ M S + V D ++ +++PE + K D+Y +G
Sbjct: 149 GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 208
Query: 513 VVLLELA 519
+ ELA
Sbjct: 209 ITACELA 215
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 78/187 (41%), Gaps = 18/187 (9%)
Query: 346 PDGSVLAVKRLN--TCKLGEKKF-RNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMS 402
P G + V+R+N C F + E++ HPN+ P + + E ++ +M+
Sbjct: 50 PTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMA 109
Query: 403 SGTLYSLLQGNATELDWPTRFRIGL---GAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
G+ L+ + +D I G + L ++HH ++H+++ ++ IL+ D
Sbjct: 110 YGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVD 164
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFG-----YIAPEYSSTMVASL--KGDVYGIG 512
+ M S + V D ++ +++PE + K D+Y +G
Sbjct: 165 GKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVG 224
Query: 513 VVLLELA 519
+ ELA
Sbjct: 225 ITACELA 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKXQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 XELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 439 GCQPPFLHQNICSNV------ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYI 492
GCQ +LH+N + + ++ED + +I DFGLA + E V G YI
Sbjct: 127 GCQ--YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL--CGTPNYI 182
Query: 493 APEYSSTMVASLKGDVYGIGVVLLEL 518
APE S S + DV+ IG ++ L
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCIMYTL 208
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 39/207 (18%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE------EKLLIY 398
G+ +A+K+L +L K+ E+ L +RH N+ LL +E + L+
Sbjct: 50 GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+M GT L + + +F + +GL ++H +H+++ + V+E
Sbjct: 110 PFM--GTDLGKLMKHEKLGEDRIQFLV-YQMLKGLRYIHAAG---IIHRDLKPGNLAVNE 163
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-------YSSTMVASLKGDVYGI 511
D + +I+DFGLA+ S + G + Y APE Y+ T+ D++ +
Sbjct: 164 DCELKILDFGLARQADSE-----MXGXVVTRWYRAPEVILNWMRYTQTV------DIWSV 212
Query: 512 GVVLLELAG----FKGNLVDWVNQLSS 534
G ++ E+ FKG+ D ++QL
Sbjct: 213 GCIMAEMITGKTLFKGS--DHLDQLKE 237
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 127 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 182 CELKILDFGLAR--HTDDE---MXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 237 LTGRTLFPGT--DHIDQL 252
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 57 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 116
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 117 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 171
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 172 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 226
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 227 LTGRTLFPGT--DHIDQL 242
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 77/176 (43%), Gaps = 17/176 (9%)
Query: 348 GSVLAVKRLNTCKLGEKKFRN---EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSG 404
G A K +NT KL + F+ E +L+HPN+ L E L++ ++ G
Sbjct: 31 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90
Query: 405 TLYSLLQGNA--TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFD 461
L+ + +E D + L +A+ H +H+N+ N++L +
Sbjct: 91 ELFEDIVAREFYSEADASHCIQQIL---ESIAYCHSNG---IVHRNLKPENLLLASKAKG 144
Query: 462 A--RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
A ++ DFGLA ++S +G G GY++PE S D++ GV+L
Sbjct: 145 AAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVIL 197
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 369 EMNRLGQLRHPNLA---PLLGYCVVEEEK-LLIYKYMSSGTLYSLLQGNATELDWPTRFR 424
E+ L RH N+ ++ +E+ K + I + + LY LL+ D F
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFL 132
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM-TSSDESSFVN 483
+ RGL ++H LH+++ + +L++ D +I DFGLA++ D + F+
Sbjct: 133 YQI--LRGLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 484 GDLGEFGYIAPEYSSTMVASLKG-DVYGIGVVLLEL 518
+ Y APE K D++ +G +L E+
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEM 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 103 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 157
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE + M + D++ +G ++ EL
Sbjct: 158 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 213 LTGRTLFPGT--DHIDQL 228
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 5/97 (5%)
Query: 429 AARGLAWLH-HGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG 487
ARG+ +L C +H+++ + IL+ E+ +I DFGLA+ + + +
Sbjct: 208 VARGMEFLSSRKC----IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 488 EFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGN 524
++APE + S K DV+ GV+L E+ G+
Sbjct: 264 PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGS 300
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 348 GSVLAVKRLNTCKLGEKKFRN---EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSG 404
G A K +NT KL + F+ E +L+HPN+ L E L++ ++ G
Sbjct: 31 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90
Query: 405 TLYSLLQGNA--TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFD 461
L+ + +E D + L +A+ H +H+N+ N++L +
Sbjct: 91 ELFEDIVAREFYSEADASHCIQQIL---ESIAYCHSNG---IVHRNLKPENLLLASKAKG 144
Query: 462 A--RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL-LEL 518
A ++ DFGLA ++S +G G GY++PE S D++ GV+L + L
Sbjct: 145 AAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 201
Query: 519 AGF 521
G+
Sbjct: 202 VGY 204
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 18/183 (9%)
Query: 348 GSVLAVKRLNTCKLGEKKFRN---EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSG 404
G A K +NT KL + F+ E +L+HPN+ L E L++ ++ G
Sbjct: 30 GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 89
Query: 405 TLYSLLQGNA--TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFD 461
L+ + +E D + L +A+ H +H+N+ N++L +
Sbjct: 90 ELFEDIVAREFYSEADASHCIQQIL---ESIAYCHSNG---IVHRNLKPENLLLASKAKG 143
Query: 462 A--RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL-LEL 518
A ++ DFGLA ++S +G G GY++PE S D++ GV+L + L
Sbjct: 144 AAVKLADFGLA---IEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL 200
Query: 519 AGF 521
G+
Sbjct: 201 VGY 203
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 114 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 168
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ ++DE + G + Y APE M + D++ +G ++ EL
Sbjct: 169 CELKILDFGLAR--HTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 224 LTGRTLFPGT--DHIDQL 239
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 67 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 127 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 182 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 237 LTGRTLFPGT--DHIDQL 252
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 114 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 168
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ ++DE + G + Y APE M + D++ +G ++ EL
Sbjct: 169 CELKILDFGLAR--HTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 224 LTGRTLFPGT--DHIDQL 239
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 53 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 113 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 167
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 168 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 223 LTGRTLFPGT--DHIDQL 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 66 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 126 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 180
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 181 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 236 LTGRTLFPGT--DHIDQL 251
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 112 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 166
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 167 XELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 222 LTGRTLFPGT--DHIDQL 237
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 112 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 166
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 167 XELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 222 LTGRTLFPGT--DHIDQL 237
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 439 GCQPPFLHQNICSNV------ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYI 492
GCQ +LH+N + + ++ED + +I DFGLA + E G YI
Sbjct: 133 GCQ--YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KTLCGTPNYI 188
Query: 493 APEYSSTMVASLKGDVYGIGVVLLEL 518
APE S S + DV+ IG ++ L
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCIMYTL 214
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 114 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 168
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ ++DE + G + Y APE M + D++ +G ++ EL
Sbjct: 169 CELKILDFGLAR--HTADE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 224 LTGRTLFPGT--DHIDQL 239
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 439 GCQPPFLHQNICSNV------ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYI 492
GCQ +LH+N + + ++ED + +I DFGLA + E G YI
Sbjct: 129 GCQ--YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KTLCGTPNYI 184
Query: 493 APEYSSTMVASLKGDVYGIGVVLLEL 518
APE S S + DV+ IG ++ L
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTL 210
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 10/86 (11%)
Query: 439 GCQPPFLHQNICSNV------ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYI 492
GCQ +LH+N + + ++ED + +I DFGLA + E G YI
Sbjct: 129 GCQ--YLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK--KTLCGTPNYI 184
Query: 493 APEYSSTMVASLKGDVYGIGVVLLEL 518
APE S S + DV+ IG ++ L
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCIMYTL 210
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 82/192 (42%), Gaps = 22/192 (11%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGE---KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
G YKA G A+K++ K E E++ L +L+H N+ L ++
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
+L+++++ L LL L+ T L G+A+ H LH+++ +
Sbjct: 76 VLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNL 131
Query: 455 LVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE-------YSSTMVASLKGD 507
L++ + + +I DFGLA+ ++ Y AP+ YS+T+ D
Sbjct: 132 LINREGELKIADFGLARAFGIPVRK--YTHEIVTLWYRAPDVLMGSKKYSTTI------D 183
Query: 508 VYGIGVVLLELA 519
++ +G + E+
Sbjct: 184 IWSVGCIFAEMV 195
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKXQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDEMA---GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDEMA---GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E L RHP L L Y ++L + +Y + G L+ L + RF G
Sbjct: 54 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YG 111
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH ++++I +++D+D +I DFGL K S + + +
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXFC 166
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
G Y+APE D +G+GVV+ E+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
GL LH + +++++ IL+D+ RI D GLA E + G +G GY
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA---VHVPEGQTIKGRVGTVGY 351
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
+APE + D + +G +L E+
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEM 378
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 377 RHPNLAPLLGYCVVEEEKLL-IYKYMSSGTLYSLLQGNATEL--------DWPTRFRI-- 425
H N+ LLG C L+ I ++ G L + L+ E D+ T +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIX 148
Query: 426 -GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
A+G+ +L +H+++ + IL+ E +I DFGLA+ + D G
Sbjct: 149 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIY-KDPDYVRKG 204
Query: 485 DLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
D ++APE V +++ DV+ GV+L E+
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E L RHP L L Y ++L + +Y + G L+ L + RF G
Sbjct: 54 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YG 111
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH ++++I +++D+D +I DFGL K S + + +
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKTFC 166
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
G Y+APE D +G+GVV+ E+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+ RL+T G E++ L +L HPN+ LL E +
Sbjct: 17 GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 77 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 132
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 133 NLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV----- 185
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 186 DIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 82/193 (42%), Gaps = 22/193 (11%)
Query: 338 GTTYKAMLP-DGSVLAVK--RLNTCKLGEKKFR-NEMNRLGQLRHPNLAPLLGYCVVEEE 393
G YKA G V+A+ RL+T G E++ L +L HPN+ LL E +
Sbjct: 16 GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH-HGCQPPFLHQNICSN 452
L+++++ + T + P +GLA+ H H LH+++
Sbjct: 76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV----LHRDLKPQ 131
Query: 453 VILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE------YSSTMVASLKG 506
+L++ + ++ DFGLA+ + ++ Y APE Y ST V
Sbjct: 132 NLLINTEGAIKLADFGLARAFGVPVRT--YTHEVVTLWYRAPEILLGCKYYSTAV----- 184
Query: 507 DVYGIGVVLLELA 519
D++ +G + E+
Sbjct: 185 DIWSLGCIFAEMV 197
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGE---KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
G YKA G A+K++ K E E++ L +L+H N+ L ++
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
+L+++++ L LL L+ T L G+A+ H LH+++ +
Sbjct: 76 VLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNL 131
Query: 455 LVDEDFDARIMDFGLAK 471
L++ + + +I DFGLA+
Sbjct: 132 LINREGELKIADFGLAR 148
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E L RHP L L Y ++L + +Y + G L+ L + RF G
Sbjct: 54 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YG 111
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH ++++I +++D+D +I DFGL K S + + +
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKTFC 166
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
G Y+APE D +G+GVV+ E+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/233 (18%), Positives = 92/233 (39%), Gaps = 26/233 (11%)
Query: 364 KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRF 423
+ F + + +L H +L G CV +E +L+ +++ G+L + L+ N ++ +
Sbjct: 57 ESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL 116
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVN 483
+ A + +L +H N+C+ IL+ + D + + KL + +
Sbjct: 117 EVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP 173
Query: 484 GDLGE--FGYIAPE-YSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKE 540
D+ + ++ PE + +L D + G L E+ S +
Sbjct: 174 KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEIC-------------SGGDKPLS 220
Query: 541 AIDKALCGKGYDE-------EILQFLKVACNCVVSRPKDRWSMYQVYQSLNSI 586
A+D + Y++ + + + NC+ P R S + + LNS+
Sbjct: 221 ALDSQRKLQFYEDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E L RHP L L Y ++L + +Y + G L+ L + RF G
Sbjct: 54 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YG 111
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH ++++I +++D+D +I DFGL K S + + +
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXFC 166
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
G Y+APE D +G+GVV+ E+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E L RHP L L Y ++L + +Y + G L+ L + RF G
Sbjct: 54 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YG 111
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH ++++I +++D+D +I DFGL K S + + +
Sbjct: 112 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXFC 166
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
G Y+APE D +G+GVV+ E+
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 198
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 118 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 172
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 173 XELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E L RHP L L Y ++L + +Y + G L+ L + RF G
Sbjct: 59 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YG 116
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH ++++I +++D+D +I DFGL K S + + +
Sbjct: 117 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKXFC 171
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
G Y+APE D +G+GVV+ E+
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 203
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
GL LH + +++++ IL+D+ RI D GLA E + G +G GY
Sbjct: 298 GLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLA---VHVPEGQTIKGRVGTVGY 351
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
+APE + D + +G +L E+
Sbjct: 352 MAPEVVKNERYTFSPDWWALGCLLYEM 378
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 8/152 (5%)
Query: 368 NEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIG 426
E L RHP L L Y ++L + +Y + G L+ L + RF G
Sbjct: 57 TESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YG 114
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL 486
L +LH ++++I +++D+D +I DFGL K S + + +
Sbjct: 115 AEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--DGATMKTFC 169
Query: 487 GEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
G Y+APE D +G+GVV+ E+
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 201
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 85/180 (47%), Gaps = 19/180 (10%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 43 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 103 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 157
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE + M + D++ +G ++ EL
Sbjct: 158 CELKILDFGLAR--HTDDEMA---GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 7/137 (5%)
Query: 338 GTTYKAMLPDGSVLAVKRLNTCKLGE---KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394
G YKA G A+K++ K E E++ L +L+H N+ L ++
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRL 75
Query: 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVI 454
+L+++++ L LL L+ T L G+A+ H LH+++ +
Sbjct: 76 VLVFEHLDQD-LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNL 131
Query: 455 LVDEDFDARIMDFGLAK 471
L++ + + +I DFGLA+
Sbjct: 132 LINREGELKIADFGLAR 148
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 17/155 (10%)
Query: 377 RHPNLAPLLGYCVVEEEKLL-IYKYMSSGTLYSLLQGNATEL--------DWPTRFRI-- 425
H N+ LLG C L+ I ++ G L + L+ E D+ T +
Sbjct: 89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIC 148
Query: 426 -GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
A+G+ +L +H+++ + IL+ E +I DFGLA+ + D G
Sbjct: 149 YSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKG 204
Query: 485 DLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
D ++APE V +++ DV+ GV+L E+
Sbjct: 205 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 239
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 109 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 163
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 164 SELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 219 LTGRTLFPGT--DHIDQL 234
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 19/157 (12%)
Query: 377 RHPNLAPLLGYCVVEEEKLL-IYKYMSSGTLYSLLQGNATEL----------DWPTRFRI 425
H N+ LLG C L+ I ++ G L + L+ E D+ T +
Sbjct: 91 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHL 150
Query: 426 ---GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV 482
A+G+ +L +H+++ + IL+ E +I DFGLA+ + D
Sbjct: 151 IXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDI-XKDPDXVR 206
Query: 483 NGDLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
GD ++APE V +++ DV+ GV+L E+
Sbjct: 207 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 112 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 166
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 167 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 222 LTGRTLFPGT--DHIDQL 237
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 109 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 163
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 164 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 219 LTGRTLFPGT--DHIDQL 234
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 46 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 105
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 106 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 160
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 161 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 215
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 216 LTGRTLFPGT--DHIDQL 231
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 109 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 163
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 164 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 219 LTGRTLFPGT--DHIDQL 234
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 43 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 102
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 103 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 157
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE + M + D++ +G ++ EL
Sbjct: 158 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 213 LTGRTLFPGT--DHIDQL 228
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 16/132 (12%)
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+Y + TLY L+ +R+ L+++H +H+N+ I +DE
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRNLKPXNIFIDE 151
Query: 459 DFDARIMDFGLAKLMTSSDE------------SSFVNGDLGEFGYIAPEY-SSTMVASLK 505
+ +I DFGLAK + S + S + +G Y+A E T + K
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEK 211
Query: 506 GDVYGIGVVLLE 517
D Y +G++ E
Sbjct: 212 IDXYSLGIIFFE 223
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 49 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 108
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 109 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 163
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 164 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 219 LTGRTLFPGT--DHIDQL 234
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 103
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 104 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 158
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE + M + D++ +G ++ EL
Sbjct: 159 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 214 LTGRTLFPGT--DHIDQL 229
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 44 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 103
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 104 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 158
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE + M + D++ +G ++ EL
Sbjct: 159 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 214 LTGRTLFPGT--DHIDQL 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 58 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 117
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 118 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 172
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 173 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 228 LTGRTLFPGT--DHIDQL 243
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 113 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 167
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 168 SELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 223 LTGRTLFPGT--DHIDQL 238
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 130 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 184
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 185 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 240 LTGRTLFPGT--DHIDQL 255
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 59 GLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 119 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 173
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 174 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 229 LTGRTLFPGT--DHIDQL 244
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 113 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 167
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 168 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 223 LTGRTLFPGT--DHIDQL 238
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 45 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 104
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 105 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 159
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE + M + D++ +G ++ EL
Sbjct: 160 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 215 LTGRTLFPGT--DHIDQL 230
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 54 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 114 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 168
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 169 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 224 LTGRTLFPGT--DHIDQL 239
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 119 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 173
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 174 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 229 LTGRTLFPGT--DHIDQL 244
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 59 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 118
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 119 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 173
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 174 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 229 LTGRTLFPGT--DHIDQL 244
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 66 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 125
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 126 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 180
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 181 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 236 LTGRTLFPGT--DHIDQL 251
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 351 LAVKRLNTCKLGE--KKFRNEMNRLGQLR-HPNLAPLLGYCVVEEEKLLIYKYMSSGTLY 407
+ +RL+ +L E + R E + L Q+ HP++ L+ L++ M G L+
Sbjct: 129 VTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELF 188
Query: 408 SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDF 467
L + TR I +++LH +H+++ IL+D++ R+ DF
Sbjct: 189 DYLTEKVALSEKETR-SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDF 244
Query: 468 GLAKLMTSSDESSFVNGDLGEFGYIAPEY-SSTMVASLKG-----DVYGIGVVLLEL 518
G + + ++ + G GY+APE +M + G D++ GV+L L
Sbjct: 245 GFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTL 298
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS--LLQGNATELDWPTRFRIG 426
E+ L +L HPN+ L ++ + + G L+ + + +E D RI
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RII 127
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVD---EDFDARIMDFGLAKLMTSSDESSFVN 483
G+ ++H + +H+++ IL++ +D D +I+DFGL+ T +++ +
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMK 181
Query: 484 GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
+G YIAPE K DV+ GV+L
Sbjct: 182 DRIGTAYYIAPEVLRGTYDE-KCDVWSAGVIL 212
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 53 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 112
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 113 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 167
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 168 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 223 LTGRTLFPGT--DHIDQL 238
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 52 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 111
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 112 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 166
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 167 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 222 LTGRTLFPGT--DHIDQL 237
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 11/154 (7%)
Query: 348 GSVLAVKRLNTCKLGEKKFRNEMNRLGQ--LRHPNLAPLL---GYCVVEEEKL-LIYKYM 401
G + A+K L + +K E R + L H +P L Y E KL LI Y+
Sbjct: 82 GKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYI 141
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD 461
+ G L++ L ++ + T + + + L H + ++++I IL+D +
Sbjct: 142 NGGELFTHL----SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGH 197
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
+ DFGL+K +DE+ G Y+AP+
Sbjct: 198 VVLTDFGLSKEFV-ADETERAYDFCGTIEYMAPD 230
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 3/117 (2%)
Query: 89 SCWNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLV 148
+C + E L L++ ++K KI E KS+Q+LD+S N +S + C+W L+
Sbjct: 343 NCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402
Query: 149 XXXXXXXXXXGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDL 205
I L + L L +NK+ IP Q+ L L++ +VA+N L
Sbjct: 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIKS-IPKQVVKLEALQELNVASNQL 456
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 67 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 126
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 127 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 181
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 182 CELKILDFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 237 LTGRTLFPGT--DHIDQL 252
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 369 EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS--LLQGNATELDWPTRFRIG 426
E+ L +L HPN+ L ++ + + G L+ + + +E D RI
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA---RII 127
Query: 427 LGAARGLAWLHHGCQPPFLHQNICSNVILVD---EDFDARIMDFGLAKLMTSSDESSFVN 483
G+ ++H + +H+++ IL++ +D D +I+DFGL+ T +++ +
Sbjct: 128 KQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS---TCFQQNTKMK 181
Query: 484 GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
+G YIAPE K DV+ GV+L
Sbjct: 182 DRIGTAYYIAPEVLRGTYDE-KCDVWSAGVIL 212
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 15/168 (8%)
Query: 350 VLAVKRLNTCKLGEK-KFRN---EMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405
+ A+K +N K E+ + RN E+ + L HP L L EE+ ++ + G
Sbjct: 42 MYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGD 101
Query: 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465
L LQ N + + I L +L + +H+++ + IL+DE I
Sbjct: 102 LRYHLQQNVHFKEETVKLFI-CELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHIT 157
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGV 513
DF +A ++ + + G Y+APE M +S KG Y V
Sbjct: 158 DFNIAAMLPRETQ---ITTMAGTKPYMAPE----MFSSRKGAGYSFAV 198
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDI-XKDPDXVRKGDARLPLKWMAPETIFDRVYT 219
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 220 IQSDVWSFGVLLWEI 234
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 377 RHPNLAPLLGYCVVEEEKLL-IYKYMSSGTLYSLLQGNATEL-----------DWPTRFR 424
H N+ LLG C L+ I ++ G L + L+ E D+ T
Sbjct: 90 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEH 149
Query: 425 I---GLGAARGLAWL-HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480
+ A+G+ +L C +H+++ + IL+ E +I DFGLA+ + D
Sbjct: 150 LICYSFQVAKGMEFLASRKC----IHRDLAARNILLSEKNVVKICDFGLARDI-XKDPDX 204
Query: 481 FVNGDLG-EFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
GD ++APE V +++ DV+ GV+L E+
Sbjct: 205 VRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 58/122 (47%), Gaps = 9/122 (7%)
Query: 399 KYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNIC-SNVILV 456
++ GTL ++ E LD + +G+ ++H +H+++ SN+ LV
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLV 170
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
D +I DFGL + + + + G L Y++PE S+ + D+Y +G++L
Sbjct: 171 DTK-QVKIGDFGLVTSLKNDGKRTRSKGTLR---YMSPEQISSQDYGKEVDLYALGLILA 226
Query: 517 EL 518
EL
Sbjct: 227 EL 228
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDI-XKDPDXVRKGDARLPLKWMAPETIFDRVYT 219
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 220 IQSDVWSFGVLLWEI 234
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDI-XKDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 229 IQSDVWSFGVLLWEI 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL-GEF 489
+G+ +LH+ +H+++ + +++D D +I DFGLA + E DL G
Sbjct: 137 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTP 190
Query: 490 GYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
YIAPE S + D++ +G +L L
Sbjct: 191 NYIAPEVLCKKGHSFEVDIWSLGCILYTL 219
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 19/180 (10%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 129
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 130 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 184
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 185 CELKILDFGLAR--HTDDE---MXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDL-GEF 489
+G+ +LH+ +H+++ + +++D D +I DFGLA + E DL G
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTP 206
Query: 490 GYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
YIAPE S + D++ +G +L L
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 18/172 (10%)
Query: 352 AVKRLNTCKLGEK---KFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
AVK +N K E+ L +L HPN+ L ++ + + G L+
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 409 --LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD---EDFDAR 463
+ + +E D RI G+ ++H + +H+++ IL++ +D D +
Sbjct: 111 EIIKRKRFSEHDAA---RIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIK 164
Query: 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
I+DFGL+ T +++ + +G YIAPE K DV+ GV+L
Sbjct: 165 IIDFGLS---TCFQQNTKMKDRIGTAYYIAPEVLRGTYDE-KCDVWSAGVIL 212
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/160 (20%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 366 FRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTL------YSLLQGNATELDW 419
F+NE+ + +++ G +E +IY+YM + ++ + +L N T
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF-I 148
Query: 420 PTRFR--IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477
P + I +++H+ + H+++ + IL+D++ ++ DFG ++ M
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKK 206
Query: 478 ESSFVNGDLGEFGYIAPEYSSTMVA--SLKGDVYGIGVVL 515
+ G G + ++ PE+ S + K D++ +G+ L
Sbjct: 207 ----IKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 6/141 (4%)
Query: 378 HPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH 437
HP L + +E + +Y++ G L +Q + + D GL +LH
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEIILGLQFLH 135
Query: 438 HGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS 497
+++++ + IL+D+D +I DFG+ K D + N G YIAPE
Sbjct: 136 ---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NXFCGTPDYIAPEIL 190
Query: 498 STMVASLKGDVYGIGVVLLEL 518
+ D + GV+L E+
Sbjct: 191 LGQKYNHSVDWWSFGVLLYEM 211
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKSQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DFGL + + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 SELKILDFGLCR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDXVRKGDARLPLKWMAPETIFDRVYT 228
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 229 IQSDVWSFGVLLWEI 243
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 16/220 (7%)
Query: 303 QVSLFQKPLVKVKLADL----MAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNT 358
+VSL KP +V + + + +F ++ TG Y + V+ K
Sbjct: 135 EVSL-AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA 193
Query: 359 CKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELD 418
L E + L RHP L L + + +Y + G L+ L +
Sbjct: 194 HTLTENRV------LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE 247
Query: 419 WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478
RF G L +LH + +++++ +++D+D +I DFGL K +
Sbjct: 248 DRARF-YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKD 302
Query: 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + G Y+APE D +G+GVV+ E+
Sbjct: 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 86/220 (39%), Gaps = 16/220 (7%)
Query: 303 QVSLFQKPLVKVKLADL----MAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNT 358
+VSL KP +V + + + +F ++ TG Y + V+ K
Sbjct: 138 EVSL-AKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVA 196
Query: 359 CKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELD 418
L E + L RHP L L + + +Y + G L+ L +
Sbjct: 197 HTLTENRV------LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSE 250
Query: 419 WPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478
RF G L +LH + +++++ +++D+D +I DFGL K +
Sbjct: 251 DRARF-YGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKD 305
Query: 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ + G Y+APE D +G+GVV+ E+
Sbjct: 306 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 345
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 36.6 bits (83), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 6/141 (4%)
Query: 378 HPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH 437
HP L + +E + +Y++ G L +Q + + D GL +LH
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQ-SCHKFDLSRATFYAAEIILGLQFLH 136
Query: 438 HGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS 497
+++++ + IL+D+D +I DFG+ K D + N G YIAPE
Sbjct: 137 ---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT--NEFCGTPDYIAPEIL 191
Query: 498 STMVASLKGDVYGIGVVLLEL 518
+ D + GV+L E+
Sbjct: 192 LGQKYNHSVDWWSFGVLLYEM 212
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLPLKWMAPETIFDRVYT 219
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 220 IQSDVWSFGVLLWEI 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLPLKWMAPETIFDRVYT 219
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 220 IQSDVWSFGVLLWEI 234
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLKWMAPETIFDRVYT 228
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 229 IQSDVWSFGVLLWEI 243
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+D+GLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDYGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 13/106 (12%)
Query: 423 FRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV 482
I + A + +LH +H+++ + I D ++ DFGL M +E V
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 483 ----------NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
G +G Y++PE S K D++ +G++L EL
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFG 490
+GL ++H +H+++ + V+ED + +I+DFGLA+ + + G +
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRW 188
Query: 491 YIAPEYS-STMVASLKGDVYGIGVVLLELAG----FKGNLVDWVNQLSS 534
Y APE S M + D++ +G ++ E+ FKG D+++QL+
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK--DYLDQLTQ 235
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 172 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLKWMAPETIFDRVYT 230
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 231 IQSDVWSFGVLLWEI 245
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 367 RNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRI 425
+ E N L +++HP + L+ Y KL LI +Y+S G L+ L+ ++ F +
Sbjct: 69 KAERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL 127
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD 485
+ L LH Q +++++ I+++ ++ DFGL K S + + +
Sbjct: 128 A-EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTF 181
Query: 486 LGEFGYIAPE 495
G Y+APE
Sbjct: 182 CGTIEYMAPE 191
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 36.2 bits (82), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 8/130 (6%)
Query: 367 RNEMNRLGQLRHPNLAPLLGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRI 425
+ E N L +++HP + L+ Y KL LI +Y+S G L+ L+ ++ F +
Sbjct: 69 KAERNILEEVKHPFIVDLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYL 127
Query: 426 GLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD 485
+ L LH Q +++++ I+++ ++ DFGL K S + + +
Sbjct: 128 A-EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXF 181
Query: 486 LGEFGYIAPE 495
G Y+APE
Sbjct: 182 CGTIEYMAPE 191
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLKWMAPETIFDRVYT 273
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 274 IQSDVWSFGVLLWEI 288
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLKWMAPETIFDRVYT 271
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 272 IQSDVWSFGVLLWEI 286
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 220 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLKWMAPETIFDRVYT 278
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 279 IQSDVWSFGVLLWEI 293
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLARDI-YKDPDYVRKGDARLPLKWMAPETIFDRVYT 265
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 266 IQSDVWSFGVLLWEI 280
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFG 490
+GL ++H +H+++ + V+ED + +I+DFGLA+ + + G +
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE-----MTGYVVTRW 206
Query: 491 YIAPEYS-STMVASLKGDVYGIGVVLLELAG----FKGNLVDWVNQLSS 534
Y APE S M + D++ +G ++ E+ FKG D+++QL+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK--DYLDQLTQ 253
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 12/177 (6%)
Query: 345 LPDGSVLAVKRLNTCKLG---EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401
+P G A K +NT KL +K E L+HPN+ L E L++ +
Sbjct: 26 IPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDF 460
+ G L+ + ++ + + L ++H +H+++ N++L +
Sbjct: 86 TGGELFE----DIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSK 141
Query: 461 DA--RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
A ++ DFGLA + ++ F G G GY++PE D++ GV+L
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLG-EFGYIAPEYSSTMVAS 503
+H+++ + IL+ E +I DFGLA+ + D GD ++APE V +
Sbjct: 222 IHRDLAARNILLSEKNVVKICDFGLARDIY-KDPDYVRKGDARLPLKWMAPETIFDRVYT 280
Query: 504 LKGDVYGIGVVLLEL 518
++ DV+ GV+L E+
Sbjct: 281 IQSDVWSFGVLLWEI 295
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFG 490
+G+ +LH+ +H+++ + +++D D +I DFGLA + E G
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KTLCGTPN 207
Query: 491 YIAPEYSSTMVASLKGDVYGIGVVLLEL 518
YIAPE S + D++ +G +L L
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTL 235
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 57/133 (42%), Gaps = 16/133 (12%)
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+Y + TLY L+ +R+ L+++H +H+++ I +DE
Sbjct: 95 EYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDE 151
Query: 459 DFDARIMDFGLAKLMTSSDE------------SSFVNGDLGEFGYIAPEY-SSTMVASLK 505
+ +I DFGLAK + S + S + +G Y+A E T + K
Sbjct: 152 SRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEK 211
Query: 506 GDVYGIGVVLLEL 518
D+Y +G++ E+
Sbjct: 212 IDMYSLGIIFFEM 224
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFG 490
+G+ +LH+ +H+++ + +++D D +I DFGLA + E G
Sbjct: 153 QGVQYLHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERK--KXLCGTPN 207
Query: 491 YIAPEYSSTMVASLKGDVYGIGVVLLEL 518
YIAPE S + D++ +G +L L
Sbjct: 208 YIAPEVLCKKGHSFEVDIWSLGCILYTL 235
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 12/177 (6%)
Query: 345 LPDGSVLAVKRLNTCKLG---EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401
+P G A K +NT KL +K E L+HPN+ L E L++ +
Sbjct: 26 IPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 85
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDF 460
+ G L+ + ++ + + L ++H +H+++ N++L +
Sbjct: 86 TGGELFE----DIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSK 141
Query: 461 DA--RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
A ++ DFGLA + ++ F G G GY++PE D++ GV+L
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVLRKDPYGKPVDMWACGVIL 196
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 12/174 (6%)
Query: 348 GSVLAVKRLNTCKLG---EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSG 404
G A K +NT KL +K E L+HPN+ L E LI+ ++ G
Sbjct: 47 GQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 106
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD--- 461
L+ + ++ + + L + H Q +H+++ +L+
Sbjct: 107 ELFE----DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAA 162
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
++ DFGLA + ++ F G G GY++PE D++ GV+L
Sbjct: 163 VKLADFGLAIEVEGEQQAWF--GFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 35.4 bits (80), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 82/200 (41%), Gaps = 29/200 (14%)
Query: 338 GTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLG------YCVV 390
G +KA DG +KR+ K +K E+ L +L H N+ G Y
Sbjct: 25 GQVFKAKHRIDGKTYVIKRV---KYNNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81
Query: 391 EEEK----------LLIYKYMSSGTLYSLLQGNATE-LDWPTRFRIGLGAARGLAWLHHG 439
K + ++ GTL ++ E LD + +G+ ++H
Sbjct: 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH-- 139
Query: 440 CQPPFLHQNIC-SNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSS 498
+++++ SN+ LVD +I DFGL + + + G L Y++PE S
Sbjct: 140 -SKKLINRDLKPSNIFLVDTK-QVKIGDFGLVTSLKNDGKRXRSKGTLR---YMSPEQIS 194
Query: 499 TMVASLKGDVYGIGVVLLEL 518
+ + D+Y +G++L EL
Sbjct: 195 SQDYGKEVDLYALGLILAEL 214
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+DF LA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDFYLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAK-LMTSSDESS-FVNGDLGE 488
RGL ++H +H+++ + +LV+E+ + +I DFG+A+ L TS E F+ +
Sbjct: 170 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 226
Query: 489 FGYIAPEYSSTMVASLKG-DVYGIGVVLLELAG----FKGNLVDWVNQL 532
Y APE ++ + D++ +G + E+ F G ++V+QL
Sbjct: 227 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK--NYVHQL 273
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 12/110 (10%)
Query: 431 RGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAK-LMTSSDESS-FVNGDLGE 488
RGL ++H +H+++ + +LV+E+ + +I DFG+A+ L TS E F+ +
Sbjct: 169 RGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVAT 225
Query: 489 FGYIAPEYSSTMVASLKG-DVYGIGVVLLELAG----FKGNLVDWVNQLS 533
Y APE ++ + D++ +G + E+ F G ++V+QL
Sbjct: 226 RWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK--NYVHQLQ 273
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 5/142 (3%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWL 436
RHP L L + + +Y + G L+ L + RF G L +L
Sbjct: 66 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYL 124
Query: 437 HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY 496
H + +++++ +++D+D +I DFGL K + + + G Y+APE
Sbjct: 125 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEV 180
Query: 497 SSTMVASLKGDVYGIGVVLLEL 518
D +G+GVV+ E+
Sbjct: 181 LEDNDYGRAVDWWGLGVVMYEM 202
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 71/182 (39%), Gaps = 11/182 (6%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396
TG Y + V+ K L E + L RHP L L +
Sbjct: 34 TGRYYAMKILKKEVIVAKDEVAHTLTENRV------LQNSRHPFLTALKYSFQTHDRLCF 87
Query: 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456
+ +Y + G L+ L + RF G L +LH + +++++ +++
Sbjct: 88 VMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYLH--SEKNVVYRDLKLENLML 144
Query: 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLL 516
D+D +I DFGL K + + + G Y+APE D +G+GVV+
Sbjct: 145 DKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMY 202
Query: 517 EL 518
E+
Sbjct: 203 EM 204
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 5/142 (3%)
Query: 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWL 436
RHP L L + + +Y + G L+ L + RF G L +L
Sbjct: 67 RHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDYL 125
Query: 437 HHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEY 496
H + +++++ +++D+D +I DFGL K + + + G Y+APE
Sbjct: 126 H--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKXFCGTPEYLAPEV 181
Query: 497 SSTMVASLKGDVYGIGVVLLEL 518
D +G+GVV+ E+
Sbjct: 182 LEDNDYGRAVDWWGLGVVMYEM 203
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 24/144 (16%)
Query: 348 GSVLAVKRL----NTCKLGEKKFRNEMNRLGQLR-HPNLAPLLGYCVVEEEK--LLIYKY 400
G V+AVK++ ++ FR E+ L +L H N+ LL + ++ L++ Y
Sbjct: 34 GEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDY 92
Query: 401 MSSGTLYSLLQGNATELDWPTRFR-IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
M + L+++++ N E P + + + + +LH G LH+++ + IL++ +
Sbjct: 93 METD-LHAVIRANILE---PVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAE 145
Query: 460 FDARIMDFGLAKLMTSSDESSFVN 483
++ DFGL++ SFVN
Sbjct: 146 CHVKVADFGLSR--------SFVN 161
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 12/174 (6%)
Query: 348 GSVLAVKRLNTCKLG---EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSG 404
G A +NT KL +K E L+HPN+ L E LI+ ++ G
Sbjct: 36 GQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGG 95
Query: 405 TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD--- 461
L+ + ++ + + L + H Q +H+N+ +L+
Sbjct: 96 ELFE----DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAA 151
Query: 462 ARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
++ DFGLA + ++ F G G GY++PE D++ GV+L
Sbjct: 152 VKLADFGLAIEVEGEQQAWF--GFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203
>pdb|1U0K|A Chain A, The Structure Of A Predicted Epimerase Pa4716 From
Pseudomonas Aeruginosa
pdb|1U0K|B Chain B, The Structure Of A Predicted Epimerase Pa4716 From
Pseudomonas Aeruginosa
Length = 288
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 123 QRLDLSANDLSGNIPAQICNWLPYLVXXXXXXXXXXGPIPAD-LGNCTYLNTLILSNNKL 181
+ LSANDLSG+ P + LPYL+ P+ A+ LG +N L + +KL
Sbjct: 143 EAFSLSANDLSGHPPRVVSTGLPYLLL----------PVTAEALGRARQVNDLQEALDKL 192
Query: 182 SGPIPYQLSNLGR 194
Y L GR
Sbjct: 193 GAAFVYLLDVDGR 205
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+ FGLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILGFGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 361 LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL-QGNATELDW 419
+ ++ E++ L Q+ H N+ L + +LI + +S G L+ L Q + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 420 PTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDF---DARIMDFGLAKLMTS 475
T F + G+ +LH H ++ N++L+D++ +++DFGLA +
Sbjct: 117 ATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
D F N G ++APE + L+ D++ IGV+
Sbjct: 170 EDGVEFKNI-FGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 361 LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL-QGNATELDW 419
+ ++ E++ L Q+ H N+ L + +LI + +S G L+ L Q + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 420 PTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDF---DARIMDFGLAKLMTS 475
T F + G+ +LH H ++ N++L+D++ +++DFGLA +
Sbjct: 117 ATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
D F N G ++APE + L+ D++ IGV+
Sbjct: 170 EDGVEFKNI-FGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 77/177 (43%), Gaps = 13/177 (7%)
Query: 352 AVKRLNTCKLG---EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
A K +NT KL +K E L+HPN+ L E L++ ++ G L+
Sbjct: 60 AAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFE 119
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDA--RIM 465
+ ++ + + L ++H Q +H+++ N++L + A ++
Sbjct: 120 ----DIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLA 175
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL-LELAGF 521
DFGLA + ++ F G G GY++PE D++ GV+L + L G+
Sbjct: 176 DFGLAIEVQGEQQAWF--GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGY 230
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 361 LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL-QGNATELDW 419
+ ++ E++ L Q+ H N+ L + +LI + +S G L+ L Q + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 420 PTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDF---DARIMDFGLAKLMTS 475
T F + G+ +LH H ++ N++L+D++ +++DFGLA +
Sbjct: 117 ATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
D F N G ++APE + L+ D++ IGV+
Sbjct: 170 EDGVEFKNI-FGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 361 LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL-QGNATELDW 419
+ ++ E++ L Q+ H N+ L + +LI + +S G L+ L Q + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 420 PTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDF---DARIMDFGLAKLMTS 475
T F + G+ +LH H ++ N++L+D++ +++DFGLA +
Sbjct: 117 ATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
D F N G ++APE + L+ D++ IGV+
Sbjct: 170 EDGVEFKNI-FGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+D GLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDAGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 361 LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLL-QGNATELDW 419
+ ++ E++ L Q+ H N+ L + +LI + +S G L+ L Q + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEE 116
Query: 420 PTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDF---DARIMDFGLAKLMTS 475
T F + G+ +LH H ++ N++L+D++ +++DFGLA +
Sbjct: 117 ATSFIKQI--LDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-- 169
Query: 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVV 514
D F N G ++APE + L+ D++ IGV+
Sbjct: 170 EDGVEFKNI-FGTPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+D GLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDRGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 7/118 (5%)
Query: 378 HPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH 437
HPN+ L L++ M G L+ L T + TR +I + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVICALH 141
Query: 438 HGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
+ +H+++ IL+D+D + ++ DFG + D + G Y+APE
Sbjct: 142 ---KLNIVHRDLKPENILLDDDMNIKLTDFGFS---CQLDPGEKLRSVCGTPSYLAPE 193
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 378 HPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH 437
HPN+ L L++ M G L+ L T + TR +I + LH
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVICALH 128
Query: 438 HGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
+ +H+++ IL+D+D + ++ DFG + + ++ V G Y+APE
Sbjct: 129 ---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV---CGTPSYLAPE 180
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 25/184 (13%)
Query: 366 FRNEMNRLGQLRHPN--LAPLLGYCVVEEEKLLIYKYMSSGT--LYSLLQGNATELDWPT 421
+RNE+ L +L+ + + L Y + ++ IY M G L S L+ + W
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER 157
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDARIMDFGLAKLMTSSDESS 480
+ L +H Q +H ++ +N ++VD +++DFG+A M S
Sbjct: 158 KSY----WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSV 211
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKG-----------DVYGIGVVLLELAGFKGNLVDWV 529
+ +G Y+ PE M +S + DV+ +G +L + K +
Sbjct: 212 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
Query: 530 NQLS 533
NQ+S
Sbjct: 272 NQIS 275
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 33.9 bits (76), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 25/184 (13%)
Query: 366 FRNEMNRLGQLRHPN--LAPLLGYCVVEEEKLLIYKYMSSGT--LYSLLQGNATELDWPT 421
+RNE+ L +L+ + + L Y + ++ IY M G L S L+ + W
Sbjct: 54 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER 110
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDARIMDFGLAKLMTSSDESS 480
+ L +H Q +H ++ +N ++VD +++DFG+A M S
Sbjct: 111 KSY----WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSV 164
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKG-----------DVYGIGVVLLELAGFKGNLVDWV 529
+ +G Y+ PE M +S + DV+ +G +L + K +
Sbjct: 165 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 224
Query: 530 NQLS 533
NQ+S
Sbjct: 225 NQIS 228
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 7/118 (5%)
Query: 378 HPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLH 437
HPN+ L L++ M G L+ L T + TR +I + LH
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETR-KIMRALLEVICALH 141
Query: 438 HGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
+ +H+++ IL+D+D + ++ DFG + + ++ V G Y+APE
Sbjct: 142 ---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV---CGTPSYLAPE 193
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 25/184 (13%)
Query: 366 FRNEMNRLGQLRHPN--LAPLLGYCVVEEEKLLIYKYMSSGT--LYSLLQGNATELDWPT 421
+RNE+ L +L+ + + L Y + ++ IY M G L S L+ + W
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER 157
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDARIMDFGLAKLMTSSDESS 480
+ L +H Q +H ++ +N ++VD +++DFG+A M S
Sbjct: 158 KSY----WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSV 211
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKG-----------DVYGIGVVLLELAGFKGNLVDWV 529
+ +G Y+ PE M +S + DV+ +G +L + K +
Sbjct: 212 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
Query: 530 NQLS 533
NQ+S
Sbjct: 272 NQIS 275
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 3/136 (2%)
Query: 70 SSWSFGNSTIGFICQFVGVSCWNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSA 129
SS++F N T V C K + L L+ +K K+ K S++ LD+S
Sbjct: 353 SSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSL 412
Query: 130 NDLSGNIPAQICNWLPYLVXXXXXXXXXXGPIPADLGNCTYLNTLILSNNKLSGPIPYQL 189
N L+ + + C W ++ G + L + L L NN++ IP +
Sbjct: 413 NSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDV 469
Query: 190 SNLGRLKKFSVANNDL 205
++L L++ +VA+N L
Sbjct: 470 THLQALQELNVASNQL 485
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 25/184 (13%)
Query: 366 FRNEMNRLGQLRHPN--LAPLLGYCVVEEEKLLIYKYMSSGT--LYSLLQGNATELDWPT 421
+RNE+ L +L+ + + L Y + ++ IY M G L S L+ + W
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER 157
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDARIMDFGLAKLMTSSDESS 480
+ L +H Q +H ++ +N ++VD +++DFG+A M S
Sbjct: 158 KSY----WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSV 211
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKG-----------DVYGIGVVLLELAGFKGNLVDWV 529
+ +G Y+ PE M +S + DV+ +G +L + K +
Sbjct: 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271
Query: 530 NQLS 533
NQ+S
Sbjct: 272 NQIS 275
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 88/216 (40%), Gaps = 28/216 (12%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLGEK---KFRNEMNRLGQLRHPN--LAPLLGYCVVE 391
+ ++ + + A+K +N + + +RNE+ L +L+ + + L Y + +
Sbjct: 41 SSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 100
Query: 392 EEKLLIYKYMSSGT--LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI 449
+ IY M G L S L+ + W + L +H Q +H ++
Sbjct: 101 Q---YIYMVMECGNIDLNSWLKKKKSIDPWERKSY----WKNMLEAVHTIHQHGIVHSDL 153
Query: 450 -CSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKG-- 506
+N ++VD +++DFG+A M S + +G Y+ PE M +S +
Sbjct: 154 KPANFLIVDGML--KLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 507 ---------DVYGIGVVLLELAGFKGNLVDWVNQLS 533
DV+ +G +L + K +NQ+S
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 247
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 463 RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-- 520
+I+DFGLA+L S + S+ G Y+APE V + K D++ GVV+ L
Sbjct: 167 KIIDFGLAELFKSDEHST---NAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGC 222
Query: 521 --FKGNLVDWVNQLSSSGRSKEAID 543
F G ++ V Q ++ A++
Sbjct: 223 LPFTGTSLEEVQQKATYKEPNYAVE 247
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 29/186 (15%)
Query: 366 FRNEMNRLGQLRHPN--LAPLLGYCVVEEEKLLIYKYMSSGT--LYSLLQGNATELDWPT 421
+RNE+ L +L+ + + L Y + ++ IY M G L S L+ + W
Sbjct: 57 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER 113
Query: 422 R--FRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDARIMDFGLAKLMTSSDE 478
+ ++ L A + HG +H ++ +N ++VD +++DFG+A M
Sbjct: 114 KSYWKNMLEAVHTIH--QHG----IVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTT 165
Query: 479 SSFVNGDLGEFGYIAPEYSSTMVASLKG-----------DVYGIGVVLLELAGFKGNLVD 527
S + +G Y+ PE M +S + DV+ +G +L + K
Sbjct: 166 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQ 225
Query: 528 WVNQLS 533
+NQ+S
Sbjct: 226 IINQIS 231
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 12/162 (7%)
Query: 424 RIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVN 483
+I + + L LH +H+++ + +L++ + DFG++ +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDI-- 195
Query: 484 GDLGEFGYIAPEYSSTMV----ASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSK 539
D G Y APE + + S+K D++ +G+ +ELA + W +
Sbjct: 196 -DAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVV 254
Query: 540 EAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQ 581
E L + E + F C+ K+R + ++ Q
Sbjct: 255 EEPSPQLPADKFSAEFVDF---TSQCLKKNSKERPTYPELXQ 293
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 25/198 (12%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLL-----GYCVVEEEKLLIYK 399
G +AVK+L+ + K+ E+ L ++H N+ LL + E + +
Sbjct: 47 GLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 106
Query: 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459
++ L ++++ D +F I RGL ++H +H+++ + + V+ED
Sbjct: 107 HLMGADLNNIVKCQKLTDDH-VQFLI-YQILRGLKYIHSA---DIIHRDLKPSNLAVNED 161
Query: 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLEL 518
+ +I+D GLA+ + DE + G + Y APE M + D++ +G ++ EL
Sbjct: 162 CELKILDGGLAR--HTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 519 AG----FKGNLVDWVNQL 532
F G D ++QL
Sbjct: 217 LTGRTLFPGT--DHIDQL 232
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 25/184 (13%)
Query: 366 FRNEMNRLGQLRHPN--LAPLLGYCVVEEEKLLIYKYMSSGT--LYSLLQGNATELDWPT 421
+RNE+ L +L+ + + L Y + ++ IY M G L S L+ + W
Sbjct: 53 YRNEIAYLNKLQQHSDKIIRLYDYEITDQ---YIYMVMECGNIDLNSWLKKKKSIDPWER 109
Query: 422 RFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDFDARIMDFGLAKLMTSSDESS 480
+ L +H Q +H ++ +N ++VD +++DFG+A M S
Sbjct: 110 KSY----WKNMLEAVHTIHQHGIVHSDLKPANFLIVDGML--KLIDFGIANQMQPDTTSV 163
Query: 481 FVNGDLGEFGYIAPEYSSTMVASLKG-----------DVYGIGVVLLELAGFKGNLVDWV 529
+ +G Y+ PE M +S + DV+ +G +L + K +
Sbjct: 164 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 223
Query: 530 NQLS 533
NQ+S
Sbjct: 224 NQIS 227
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 385 LGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPP 443
+ Y +KL I M+ G L+ L + + RF AA + L H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY----AAEIILGLEHMHNRF 312
Query: 444 FLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVA- 502
+++++ IL+DE RI D GLA + + +G GY+APE VA
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAY 368
Query: 503 SLKGDVYGIGVVLLEL 518
D + +G +L +L
Sbjct: 369 DSSADWFSLGCMLFKL 384
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 63/154 (40%), Gaps = 11/154 (7%)
Query: 370 MNRLGQLRHPNLAPLLGYCVV----EEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFR 424
+ L HPN+ L C V E KL L+++++ L + + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ RGL +LH +H+++ ILV ++ DFGLA++ + + V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV-- 179
Query: 485 DLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
+ Y APE + D++ +G + E+
Sbjct: 180 -VVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 385 LGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPP 443
+ Y +KL I M+ G L+ L + + RF AA + L H
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY----AAEIILGLEHMHNRF 311
Query: 444 FLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVA- 502
+++++ IL+DE RI D GLA + + +G GY+APE VA
Sbjct: 312 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAY 367
Query: 503 SLKGDVYGIGVVLLEL 518
D + +G +L +L
Sbjct: 368 DSSADWFSLGCMLFKL 383
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 385 LGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPP 443
+ Y +KL I M+ G L+ L + + RF AA + L H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY----AAEIILGLEHMHNRF 312
Query: 444 FLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVA- 502
+++++ IL+DE RI D GLA + + +G GY+APE VA
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAY 368
Query: 503 SLKGDVYGIGVVLLEL 518
D + +G +L +L
Sbjct: 369 DSSADWFSLGCMLFKL 384
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 57/136 (41%), Gaps = 10/136 (7%)
Query: 385 LGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPP 443
+ Y +KL I M+ G L+ L + + RF AA + L H
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFY----AAEIILGLEHMHNRF 312
Query: 444 FLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVA- 502
+++++ IL+DE RI D GLA + + +G GY+APE VA
Sbjct: 313 VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKP----HASVGTHGYMAPEVLQKGVAY 368
Query: 503 SLKGDVYGIGVVLLEL 518
D + +G +L +L
Sbjct: 369 DSSADWFSLGCMLFKL 384
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 11/154 (7%)
Query: 370 MNRLGQLRHPNLAPLLGYCVV----EEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFR 424
+ L HPN+ L C V E KL L+++++ L + + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ RGL +LH +H+++ ILV ++ DFGLA++ + + V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 485 DLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
L Y APE + D++ +G + E+
Sbjct: 182 TL---WYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 25/213 (11%)
Query: 320 MAASNSFCSENVIISTRTGTTYKAM-LPDGSVLAVK--RLNTCKLGEKKFRNEMNRLGQL 376
M++S+ F + + T YK + G +A+K +L++ + E++ + +L
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 377 RHPNLAPLLGYCVVEEEKLLIY--------KYMSSGTLYSLLQGNATELDWPTRFRIGLG 428
+H N+ L E + L++ KYM S T+ + +G EL+ F+ L
Sbjct: 61 KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRG--LELNLVKYFQWQL- 117
Query: 429 AARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGE 488
+GLA+ H LH+++ +L+++ ++ DFGLA+ + + ++
Sbjct: 118 -LQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNT--FSSEVVT 171
Query: 489 FGYIAPEY---SSTMVASLKGDVYGIGVVLLEL 518
Y AP+ S T S+ D++ G +L E+
Sbjct: 172 LWYRAPDVLMGSRTYSTSI--DIWSCGCILAEM 202
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 11/154 (7%)
Query: 370 MNRLGQLRHPNLAPLLGYCVV----EEEKL-LIYKYMSSGTLYSLLQGNATELDWPTRFR 424
+ L HPN+ L C V E KL L+++++ L + + T
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 425 IGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNG 484
+ RGL +LH +H+++ ILV ++ DFGLA++ + + V
Sbjct: 125 MMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVV 181
Query: 485 DLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
L Y APE + D++ +G + E+
Sbjct: 182 TL---WYRAPEVLLQSSYATPVDLWSVGCIFAEM 212
>pdb|3BLW|A Chain A, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|C Chain C, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|E Chain E, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|G Chain G, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|I Chain I, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|K Chain K, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|M Chain M, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLW|O Chain O, Yeast Isocitrate Dehydrogenase With Citrate And Amp Bound
In The Regulatory Subunits
pdb|3BLX|A Chain A, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|C Chain C, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|E Chain E, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|G Chain G, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|I Chain I, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|K Chain K, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|M Chain M, Yeast Isocitrate Dehydrogenase (Apo Form)
pdb|3BLX|O Chain O, Yeast Isocitrate Dehydrogenase (Apo Form)
Length = 349
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNL 381
SV AV + N KLG+ FRN + +GQ +P++
Sbjct: 177 SVTAVHKANIMKLGDGLFRNIITEIGQKEYPDI 209
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + ++ Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|3BLV|A Chain A, Yeast Isocitrate Dehydrogenase With Citrate Bound In The
Regulatory Subunits
pdb|3BLV|C Chain C, Yeast Isocitrate Dehydrogenase With Citrate Bound In The
Regulatory Subunits
pdb|3BLV|E Chain E, Yeast Isocitrate Dehydrogenase With Citrate Bound In The
Regulatory Subunits
pdb|3BLV|G Chain G, Yeast Isocitrate Dehydrogenase With Citrate Bound In The
Regulatory Subunits
Length = 354
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNL 381
SV AV + N KLG+ FRN + +GQ +P++
Sbjct: 177 SVTAVHKANIXKLGDGLFRNIITEIGQKEYPDI 209
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 17/180 (9%)
Query: 351 LAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE---EEKLLIYKYMS-- 402
+A+K+L+ + K+ E+ + + H N+ LL + EE +Y M
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM 111
Query: 403 SGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDA 462
L ++Q ELD + G+ LH +H+++ + I+V D
Sbjct: 112 DANLXQVIQ---MELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTL 165
Query: 463 RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
+I+DFGLA+ ++ S + + Y APE M D++ +G ++ E+ K
Sbjct: 166 KILDFGLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3BFE|A Chain A, Crystal Structure Of The Class A Beta-Lactamase Sed-1 From
Citrobacter Sedlakii
pdb|3BFE|B Chain B, Crystal Structure Of The Class A Beta-Lactamase Sed-1 From
Citrobacter Sedlakii
pdb|3BFE|C Chain C, Crystal Structure Of The Class A Beta-Lactamase Sed-1 From
Citrobacter Sedlakii
pdb|3BFE|D Chain D, Crystal Structure Of The Class A Beta-Lactamase Sed-1 From
Citrobacter Sedlakii
Length = 262
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 27/142 (19%)
Query: 10 IMNQELTIIDKNTQKAPPATAKSDSTQITFSSLASETVAEDDVKCLEGVKSSLNDPQRKL 69
I+ Q++TI + P T K +T + L++ T+ D + + + L P
Sbjct: 64 ILQQKMTIKKADLTNWNPVTEKYVGNTMTLAELSAATLQYSDNTAMNKLLAHLGGP---- 119
Query: 70 SSWSFGNSTIGFICQFVGVSCWNDKENRILNLELREMKLSGKIP-------EPLKFCKSM 122
GN T + +G + L+ +E +L+ IP PL KS+
Sbjct: 120 -----GNVTA--FARSIG--------DTTFRLDRKEPELNTAIPGDERDTTSPLAMAKSL 164
Query: 123 QRLDLSANDLSGNIPAQICNWL 144
++L L + L+G AQ+ +WL
Sbjct: 165 RKLTL-GDALAGPQRAQLVDWL 185
>pdb|3BFC|A Chain A, Class A Beta-Lactamase Sed-G238c Complexed With Imipenem
pdb|3BFC|B Chain B, Class A Beta-Lactamase Sed-G238c Complexed With Imipenem
pdb|3BFC|C Chain C, Class A Beta-Lactamase Sed-G238c Complexed With Imipenem
pdb|3BFC|D Chain D, Class A Beta-Lactamase Sed-G238c Complexed With Imipenem
pdb|3BFF|A Chain A, Class A Beta-Lactamase Sed-G238c Complexed With Faropenem
pdb|3BFF|B Chain B, Class A Beta-Lactamase Sed-G238c Complexed With Faropenem
pdb|3BFF|C Chain C, Class A Beta-Lactamase Sed-G238c Complexed With Faropenem
pdb|3BFF|D Chain D, Class A Beta-Lactamase Sed-G238c Complexed With Faropenem
pdb|3BFG|A Chain A, Class A Beta-Lactamase Sed-G238c Complexed With Meropenem
pdb|3BFG|B Chain B, Class A Beta-Lactamase Sed-G238c Complexed With Meropenem
pdb|3BFG|C Chain C, Class A Beta-Lactamase Sed-G238c Complexed With Meropenem
pdb|3BFG|D Chain D, Class A Beta-Lactamase Sed-G238c Complexed With Meropenem
Length = 262
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 27/142 (19%)
Query: 10 IMNQELTIIDKNTQKAPPATAKSDSTQITFSSLASETVAEDDVKCLEGVKSSLNDPQRKL 69
I+ Q++TI + P T K +T + L++ T+ D + + + L P
Sbjct: 64 ILQQKMTIKKADLTNWNPVTEKYVGNTMTLAELSAATLQYSDNTAMNKLLAHLGGP---- 119
Query: 70 SSWSFGNSTIGFICQFVGVSCWNDKENRILNLELREMKLSGKIP-------EPLKFCKSM 122
GN T + +G + L+ +E +L+ IP PL KS+
Sbjct: 120 -----GNVTA--FARSIG--------DTTFRLDRKEPELNTAIPGDERDTTSPLAMAKSL 164
Query: 123 QRLDLSANDLSGNIPAQICNWL 144
++L L + L+G AQ+ +WL
Sbjct: 165 RKLTL-GDALAGPQRAQLVDWL 185
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +GV++ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEM 218
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 82/189 (43%), Gaps = 32/189 (16%)
Query: 348 GSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH---PNLAPLLGYCVVEEEKLLIYKYMSS- 403
G V+AVK++ E+ R M+ L+ P + G + + + + M +
Sbjct: 50 GHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTC 109
Query: 404 -GTLYSLLQGNATELDWPTRF--RIGLGAARGLAWLH--HGCQPPFLHQNICSNVILVDE 458
L +QG P R ++ + + L +L HG +H+++ + IL+DE
Sbjct: 110 AEKLKKRMQGPI-----PERILGKMTVAIVKALYYLKEKHG----VIHRDVKPSNILLDE 160
Query: 459 DFDARIMDFGLAKLMT---SSDESSFVNGDLGEFGYIAPEY-----SSTMVASLKGDVYG 510
++ DFG++ + + D S+ G Y+APE + ++ DV+
Sbjct: 161 RGQIKLCDFGISGRLVDDKAKDRSA------GCAAYMAPERIDPPDPTKPDYDIRADVWS 214
Query: 511 IGVVLLELA 519
+G+ L+ELA
Sbjct: 215 LGISLVELA 223
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +GV++ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEM 218
>pdb|3BFD|A Chain A, Crystal Structure Of The Class A Beta-lactamase Sed-g238c
Mutant From Citrobacter Sedlakii
pdb|3BFD|B Chain B, Crystal Structure Of The Class A Beta-lactamase Sed-g238c
Mutant From Citrobacter Sedlakii
pdb|3BFD|C Chain C, Crystal Structure Of The Class A Beta-lactamase Sed-g238c
Mutant From Citrobacter Sedlakii
pdb|3BFD|D Chain D, Crystal Structure Of The Class A Beta-lactamase Sed-g238c
Mutant From Citrobacter Sedlakii
Length = 263
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 27/142 (19%)
Query: 10 IMNQELTIIDKNTQKAPPATAKSDSTQITFSSLASETVAEDDVKCLEGVKSSLNDPQRKL 69
I+ Q++TI + P T K +T + L++ T+ D + + + L P
Sbjct: 65 ILQQKMTIKKADLTNWNPVTEKYVGNTMTLAELSAATLQYSDNTAMNKLLAHLGGP---- 120
Query: 70 SSWSFGNSTIGFICQFVGVSCWNDKENRILNLELREMKLSGKIP-------EPLKFCKSM 122
GN T + +G + L+ +E +L+ IP PL KS+
Sbjct: 121 -----GNVTA--FARSIG--------DTTFRLDRKEPELNTAIPGDERDTTSPLAMAKSL 165
Query: 123 QRLDLSANDLSGNIPAQICNWL 144
++L L + L+G AQ+ +WL
Sbjct: 166 RKLTL-GDALAGPQRAQLVDWL 186
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 408 SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDF 467
+L Q ELD + G+ LH +H+++ + I+V D +I+DF
Sbjct: 107 NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDF 163
Query: 468 GLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
GLA+ ++ S + + Y APE M D++ +G ++ E+ K
Sbjct: 164 GLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + ++ Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPEVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +G ++ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 6/115 (5%)
Query: 408 SLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDF 467
+L Q ELD + G+ LH +H+++ + I+V D +I+DF
Sbjct: 114 NLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDF 170
Query: 468 GLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
GLA+ ++ S + + Y APE M D++ +G ++ E+ K
Sbjct: 171 GLAR---TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 14/171 (8%)
Query: 350 VLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSL 409
++AVK + ++ + E+ LRHPN+ + +I +Y S G LY
Sbjct: 47 LVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYER 106
Query: 410 L--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR--IM 465
+ G +E + F+ L G+++ H H+++ L+D R I
Sbjct: 107 ICNAGRFSEDEARFFFQQLLS---GVSYCHSM---QICHRDLKLENTLLDGSPAPRLKIC 160
Query: 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLK-GDVYGIGVVL 515
DFG +K SS S +G YIAPE K DV+ GV L
Sbjct: 161 DFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTL 208
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLM--TSSDESSFVNGDLGEFGYIAPEY---SST 499
+H+++ + +L++ + D ++ DFGLA+++ +++D S G Y+A +
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEV 193
Query: 500 MVASLK----GDVYGIGVVLLEL 518
M+ S K DV+ G +L EL
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + ++ Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMEPEVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 76/185 (41%), Gaps = 15/185 (8%)
Query: 336 RTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395
TG Y + V+ C + EK+ + + R HP L L +
Sbjct: 46 ETGDLYAVKVLKKDVILQDDDVECTMTEKRILS-LAR----NHPFLTQLFCCFQTPDRLF 100
Query: 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455
+ ++++ G L +Q + + RF AA ++ L +++++ + +L
Sbjct: 101 FVMEFVNGGDLMFHIQKSRRFDEARARFY----AAEIISALMFLHDKGIIYRDLKLDNVL 156
Query: 456 VDEDFDARIMDFGLAK--LMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGV 513
+D + ++ DFG+ K + ++F G YIAPE M+ D + +GV
Sbjct: 157 LDHEGHCKLADFGMCKEGICNGVTTATFC----GTPDYIAPEILQEMLYGPAVDWWAMGV 212
Query: 514 VLLEL 518
+L E+
Sbjct: 213 LLYEM 217
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 87/216 (40%), Gaps = 28/216 (12%)
Query: 337 TGTTYKAMLPDGSVLAVKRLNTCKLGEK---KFRNEMNRLGQLRHPN--LAPLLGYCVVE 391
+ ++ + + A+K +N + + +RNE+ L +L+ + + L Y + +
Sbjct: 41 SSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 100
Query: 392 EEKLLIYKYMSSGT--LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI 449
+ IY M G L S L+ + W + L +H Q +H ++
Sbjct: 101 Q---YIYMVMECGNIDLNSWLKKKKSIDPWERKSY----WKNMLEAVHTIHQHGIVHSDL 153
Query: 450 -CSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKG-- 506
+N ++VD +++DFG+A M + +G Y+ PE M +S +
Sbjct: 154 KPANFLIVDGML--KLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 507 ---------DVYGIGVVLLELAGFKGNLVDWVNQLS 533
DV+ +G +L + K +NQ+S
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS 247
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 385 LGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATEL-DWPTRFRIG--LGAARGLAWLHHGC 440
L Y +E L L+ Y G L +LL +L + RF IG + A + LH
Sbjct: 139 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH--- 195
Query: 441 QPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTM 500
++H++I + +L+D + R+ DFG + L + D + + +G YI+PE M
Sbjct: 196 ---YVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAM 251
Query: 501 VASL-----KGDVYGIGVVLLEL 518
+ + D + +GV + E+
Sbjct: 252 EDGMGKYGPECDWWSLGVCMYEM 274
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 385 LGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATEL-DWPTRFRIG--LGAARGLAWLHHGC 440
L Y +E L L+ Y G L +LL +L + RF IG + A + LH
Sbjct: 155 LHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH--- 211
Query: 441 QPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTM 500
++H++I + +L+D + R+ DFG + L + D + + +G YI+PE M
Sbjct: 212 ---YVHRDIKPDNVLLDVNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAM 267
Query: 501 VASL-----KGDVYGIGVVLLEL 518
+ + D + +GV + E+
Sbjct: 268 EDGMGKYGPECDWWSLGVCMYEM 290
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 345 LPDGSVLAVKRLNTCKLG---EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401
L G A K +NT KL +K E L+H N+ L E L++ +
Sbjct: 26 LCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLV 85
Query: 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI-CSNVILVDEDF 460
+ G L+ + ++ + + L + H Q +H+++ N++L +
Sbjct: 86 TGGELFE----DIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCK 141
Query: 461 DA--RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVL 515
A ++ DFGLA + ++ F G G GY++PE D++ GV+L
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWF--GFAGTPGYLSPEVLRKEAYGKPVDIWACGVIL 196
>pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The
Absence Of Calcium
pdb|2EAR|A Chain A, P21 Crystal Of The Sr Ca2+-Atpase With Bound Tg
pdb|2EAT|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase With Bound Cpa And
Tg
pdb|2ZBF|A Chain A, Calcium Pump Crystal Structure With Bound Bef3 And Tg In
The Absence Of Calcium
pdb|2ZBG|A Chain A, Calcium Pump Crystal Structure With Bound Alf4 And Tg In
The Absence Of Calcium
pdb|3AR2|A Chain A, Calcium Pump Crystal Structure With Bound Amppcp And Ca2+
pdb|3AR3|A Chain A, Calcium Pump Crystal Structure With Bound Adp And Tg
pdb|3AR4|A Chain A, Calcium Pump Crystal Structure With Bound Atp And Tg In
The Absence Of Ca2+
pdb|3AR5|A Chain A, Calcium Pump Crystal Structure With Bound Tnp-Amp And Tg
pdb|3AR6|A Chain A, Calcium Pump Crystal Structure With Bound Tnp-Adp And Tg
In The Absence Of Calcium
pdb|3AR7|A Chain A, Calcium Pump Crystal Structure With Bound Tnp-Atp And Tg
In The Absence Of Ca2+
pdb|3AR8|A Chain A, Calcium Pump Crystal Structure With Bound Alf4, Tnp-Amp
And Tg
pdb|3AR9|A Chain A, Calcium Pump Crystal Structure With Bound Bef3, Tnp-Amp
And Tg In The Absence Of Calcium
pdb|2ZBE|A Chain A, Calcium Pump Crystal Structure With Bound Bef3 In The
Absence Of Calcium And Tg
pdb|2ZBE|B Chain B, Calcium Pump Crystal Structure With Bound Bef3 In The
Absence Of Calcium And Tg
pdb|2ZBD|A Chain A, Crystal Structure Of The Sr Calcium Pump With Bound
Aluminium Fluoride, Adp And Calcium
Length = 995
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 473 MTSSDESSFVNGD-----LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
M D S F+ + +G G + P M + GI V+++ KG +
Sbjct: 577 MVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMIT-GDNKGTAIA 635
Query: 528 WVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACN--CVVSR--PKDRWSMYQVYQSL 583
++ G ++E D+A G+ +D+ L + AC C +R P + + + QS
Sbjct: 636 ICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY 695
Query: 584 NSIAAQHG 591
+ I A G
Sbjct: 696 DEITAMTG 703
>pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State
pdb|1IWO|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase In The Absence Of
Ca2+
pdb|1IWO|B Chain B, Crystal Structure Of The Sr Ca2+-Atpase In The Absence Of
Ca2+
pdb|1SU4|A Chain A, Crystal Structure Of Calcium Atpase With Two Bound Calcium
Ions
pdb|1T5S|A Chain A, Structure Of The (sr)ca2+-atpase Ca2-e1-amppcp Form
pdb|1T5T|A Chain A, Structure Of The (Sr)ca2+-Atpase Ca2-E1-Adp:alf4- Form
pdb|1VFP|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase With Bound Amppcp
pdb|1VFP|B Chain B, Crystal Structure Of The Sr Ca2+-Atpase With Bound Amppcp
pdb|1WPG|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase With Mgf4
pdb|1WPG|B Chain B, Crystal Structure Of The Sr Ca2+-Atpase With Mgf4
pdb|1WPG|C Chain C, Crystal Structure Of The Sr Ca2+-Atpase With Mgf4
pdb|1WPG|D Chain D, Crystal Structure Of The Sr Ca2+-Atpase With Mgf4
pdb|1XP5|A Chain A, Structure Of The (Sr)ca2+-Atpase E2-Alf4- Form
pdb|2AGV|A Chain A, Crystal Structure Of The Sr Ca2+-atpase With Bhq And Tg
pdb|2AGV|B Chain B, Crystal Structure Of The Sr Ca2+-atpase With Bhq And Tg
pdb|2BY4|A Chain A, Sr Ca(2+)-Atpase In The Hne2 State Complexed With The
Thapsigargin Derivative Boc-12adt.
pdb|2C88|A Chain A, Crystal Structure Of (Sr) Calcium-Atpase E2(Tg):amppcp
Form
pdb|2C8K|A Chain A, Crystal Structure Of (Sr) Calcium-Atpase E2(Tg) With
Partially Occupied Amppcp Site
pdb|2C8L|A Chain A, Crystal Structure Of (Sr) Calcium-Atpase E2(Tg) Form
pdb|2C9M|A Chain A, Structure Of (Sr) Calcium-Atpase In The Ca2e1 State Solved
In A P1 Crystal Form.
pdb|2C9M|B Chain B, Structure Of (Sr) Calcium-Atpase In The Ca2e1 State Solved
In A P1 Crystal Form.
pdb|2O9J|A Chain A, Crystal Structure Of Calcium Atpase With Bound Magnesium
Fluoride And Cyclopiazonic Acid
pdb|2OA0|A Chain A, Crystal Structure Of Calcium Atpase With Bound Adp And
Cyclopiazonic Acid
pdb|3B9B|A Chain A, Structure Of The E2 Beryllium Fluoride Complex Of The
Serca Ca2+-Atpase
pdb|3B9R|A Chain A, Serca Ca2+-Atpase E2 Aluminium Fluoride Complex Without
Thapsigargin
pdb|3B9R|B Chain B, Serca Ca2+-Atpase E2 Aluminium Fluoride Complex Without
Thapsigargin
pdb|2EAS|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase With Bound Cpa
pdb|2EAU|A Chain A, Crystal Structure Of The Sr Ca2+-Atpase With Bound Cpa In
The Presence Of Curcumin
pdb|3FGO|A Chain A, Crystal Structure Of The E2 Magnesium Fluoride Complex Of
The (Sr) Ca2+-Atpase With Bound Cpa And Amppcp
pdb|3FGO|B Chain B, Crystal Structure Of The E2 Magnesium Fluoride Complex Of
The (Sr) Ca2+-Atpase With Bound Cpa And Amppcp
pdb|3FPB|A Chain A, The Structure Of Sarcoplasmic Reticulum Ca2+-Atpase Bound
To Cyclopiazonic Acid With Atp
pdb|3FPS|A Chain A, The Structure Of Sarcoplasmic Reticulum Ca2+-Atpase Bound
To Cyclopiazonic And Adp
pdb|3NAL|A Chain A, Sr Ca(2+)-Atpase In The Hne2 State Complexed With The
Thapsigargin Derivative Dtb
pdb|3NAM|A Chain A, Sr Ca(2+)-Atpase In The Hne2 State Complexed With The
Thapsigargin Derivative Dotg
pdb|3NAN|A Chain A, Sr Ca(2+)-Atpase In The Hne2 State Complexed With A
Thapsigargin Derivative Boc-(Phi)tg
pdb|3N5K|A Chain A, Structure Of The (sr)ca2+-atpase E2-alf4- Form
pdb|3N5K|B Chain B, Structure Of The (sr)ca2+-atpase E2-alf4- Form
pdb|3N8G|A Chain A, Structure Of The (sr)ca2+-atpase Ca2-e1-caamppcp Form
pdb|2YFY|A Chain A, Serca In The Hne2 State Complexed With Debutanoyl
Thapsigargin
Length = 994
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 473 MTSSDESSFVNGD-----LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
M D S F+ + +G G + P M + GI V+++ KG +
Sbjct: 576 MVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMIT-GDNKGTAIA 634
Query: 528 WVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACN--CVVSR--PKDRWSMYQVYQSL 583
++ G ++E D+A G+ +D+ L + AC C +R P + + + QS
Sbjct: 635 ICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY 694
Query: 584 NSIAAQHG 591
+ I A G
Sbjct: 695 DEITAMTG 702
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The
Serca Ca2+-Atpase
Length = 994
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 10/128 (7%)
Query: 473 MTSSDESSFVNGD-----LGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527
M D S F+ + +G G + P M + GI V+++ KG +
Sbjct: 576 MVLDDSSRFMEYETDLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMIT-GDNKGTAIA 634
Query: 528 WVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACN--CVVSR--PKDRWSMYQVYQSL 583
++ G ++E D+A G+ +D+ L + AC C +R P + + + QS
Sbjct: 635 ICRRIGIFGENEEVADRAYTGREFDDLPLAEQREACRRACCFARVEPSHKSKIVEYLQSY 694
Query: 584 NSIAAQHG 591
+ I A G
Sbjct: 695 DEITAMTG 702
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 190
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 221
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 37/190 (19%)
Query: 325 SFCSENVIISTRTGT-TYKAMLPDGSVLAVKR-LNTCKLGEKKFRNEMNRLGQLR----H 378
SFC ++V+ GT Y+ M D +AVKR L C F + LR H
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPEC------FSFADREVQLLRESDEH 77
Query: 379 PNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGL-------GAAR 431
PN+ + +C EK ++Y++ + LQ + D+ +GL
Sbjct: 78 PNV--IRYFCT---EKDRQFQYIAIELCAATLQEYVEQKDFA---HLGLEPITLLQQTTS 129
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDE-----DFDARIMDFGLAKLMTSSDES-SFVNGD 485
GLA LH +H+++ + IL+ A I DFGL K + S S +G
Sbjct: 130 GLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 486 LGEFGYIAPE 495
G G+IAPE
Sbjct: 187 PGTEGWIAPE 196
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 184
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 15/86 (17%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD-------LGEFG----YIA 493
+H+++ + +L++ + D ++ DFGLA+++ DES+ N + + EF Y A
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARII---DESAADNSEPTGQQSGMVEFVATRWYRA 190
Query: 494 PEYSSTMVA-SLKGDVYGIGVVLLEL 518
PE T S DV+ G +L EL
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|2IEW|A Chain A, Crystal Structure Of Inositol Phosphate Multikinase Ipk2
From S. Cerevisiae
pdb|2IEW|B Chain B, Crystal Structure Of Inositol Phosphate Multikinase Ipk2
From S. Cerevisiae
pdb|2IF8|A Chain A, Crystal Structure Of Inositol Phosphate Multikinase Ipk2
In Complex With Adp And Mn2+ From S. Cerevisiae
pdb|2IF8|B Chain B, Crystal Structure Of Inositol Phosphate Multikinase Ipk2
In Complex With Adp And Mn2+ From S. Cerevisiae
Length = 363
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 112 IPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLP 145
P+ L+F K++Q D+S S + A +C+W+P
Sbjct: 34 FPQELEFYKAIQVRDVSRRKSSADGDAPLCSWMP 67
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 229
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 229
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 83/188 (44%), Gaps = 21/188 (11%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE------EEKLLIY 398
G +AVK+L+ + K+ E+ L + H N+ LL + ++ L+
Sbjct: 47 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 106
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ M + +L Q ELD R+ + L + H +H+++ + I+V
Sbjct: 107 ELMDA----NLCQVIHMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 159
Query: 459 DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLEL 518
D +I+DFGLA+ T+S + + Y APE M D++ +G ++ EL
Sbjct: 160 DCTLKILDFGLAR--TASTNFMMTPYVVTRY-YRAPEVILGMGYKENVDIWSVGCIMGEL 216
Query: 519 AGFKGNLV 526
KG+++
Sbjct: 217 V--KGSVI 222
>pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase
(Serca) From Bovine Muscle
Length = 992
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 52/125 (41%), Gaps = 9/125 (7%)
Query: 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVN 530
K M + +FV G G + P M + GI V+++ KG +
Sbjct: 582 KFMEYETDLTFV----GVVGMLDPPRKEVMGSIQLCRDAGIRVIMIT-GDNKGTAIAICR 636
Query: 531 QLSSSGRSKEAIDKALCGKGYDEEILQFLKVACN--CVVSR--PKDRWSMYQVYQSLNSI 586
++ G +++ D+A G+ +D+ L + AC C +R P + + + QS + I
Sbjct: 637 RIGIFGENEDVADRAYTGREFDDLPLAEQREACRRACCFARVEPTHKSKIVEYLQSFDEI 696
Query: 587 AAQHG 591
A G
Sbjct: 697 TAMTG 701
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 161 IPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDKAD 220
+PA++ N + L L LS+N+L+ +P +L + +LK F +N +T T+P F
Sbjct: 262 LPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQ 319
Query: 221 FDGNSDLCGGPL 232
F G + G PL
Sbjct: 320 FLG---VEGNPL 328
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 196
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 161 IPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF 216
+P +L N +L + LSNN++S SN+ +L ++ N L P +F G
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGL 101
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 31/187 (16%)
Query: 348 GSVLAVKRLN---TCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE------EEKLLIY 398
G +AVK+L+ + K+ E+ L + H N+ LL + ++ L+
Sbjct: 49 GINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVM 108
Query: 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE 458
+ M + +L Q ELD R+ + L + H +H+++ + I+V
Sbjct: 109 ELMDA----NLCQVIHMELD---HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS 161
Query: 459 DFDARIMDFGLAK------LMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIG 512
D +I+DFGLA+ +MT + + Y APE M + D++ +G
Sbjct: 162 DCTLKILDFGLARTACTNFMMTPYVVTRY---------YRAPEVILGMGYAANVDIWSVG 212
Query: 513 VVLLELA 519
++ EL
Sbjct: 213 CIMGELV 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +G ++ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +G ++ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +G ++ E+
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEM 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +G ++ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +G ++ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +G ++ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGD-----------LGEFGYIA 493
+H+++ + +L++ + D ++ DFGLA+++ DES+ N + + Y A
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARII---DESAADNSEPTGQQSGMTEXVATRWYRA 190
Query: 494 PEYSSTMVA-SLKGDVYGIGVVLLEL 518
PE T S DV+ G +L EL
Sbjct: 191 PEVMLTSAKYSRAMDVWSCGCILAEL 216
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522
APE M D++ +G ++ E+ K
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ ++ S + + Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +G ++ E+
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEM 218
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 432 GLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGY 491
G+ LH +H+++ + I+V D +I+DFGLA+ T+ V + + Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRY-Y 193
Query: 492 IAPEYSSTMVASLKGDVYGIGVVLLEL 518
APE M D++ +G ++ E+
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEM 220
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 360 KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE---KLLIYKYMSSGTLYSLLQGNATE 416
KLG K E+ L ++ H N+ +L + E + +L++ K+ S L++ + +
Sbjct: 72 KLG--KVTLEIAILSRVEHANIIKVLD--IFENQGFFQLVMEKHGSGLDLFAFIDRHP-R 126
Query: 417 LDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476
LD P I + +L +H++I I++ EDF +++DFG A +
Sbjct: 127 LDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL--- 180
Query: 477 DESSFVNGDLGEFGYIAPE 495
+ G Y APE
Sbjct: 181 ERGKLFYTFCGTIEYCAPE 199
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 20/145 (13%)
Query: 385 LGYCVVEEEKL-LIYKYMSSGTLYSLLQGNATEL-DWPTRFRIG--LGAARGLAWLHHGC 440
L Y ++ L L+ Y G L +LL L + RF + + A + LH
Sbjct: 139 LHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH--- 195
Query: 441 QPPFLHQNICSNVILVDEDFDARIMDFG-LAKLMTSSDESSFVNGDLGEFGYIAPEYSST 499
++H++I + IL+D + R+ DFG KLM S V +G YI+PE
Sbjct: 196 ---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVA--VGTPDYISPEILQA 250
Query: 500 MVASLKG------DVYGIGVVLLEL 518
M KG D + +GV + E+
Sbjct: 251 MEGG-KGRYGPECDWWSLGVCMYEM 274
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 28.9 bits (63), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 9/149 (6%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++AVK + + ++ + E+ LRHPN+ + ++ +Y S G L+
Sbjct: 44 ELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 103
Query: 409 LLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR--IMD 466
+ + RF G+++ H Q H+++ L+D R I D
Sbjct: 104 RICNAGRFSEDEARFFFQ-QLISGVSYC-HAMQ--VCHRDLKLENTLLDGSPAPRLKICD 159
Query: 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPE 495
FG +K SS S +G YIAPE
Sbjct: 160 FGYSK---SSVLHSQPKSTVGTPAYIAPE 185
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 28.9 bits (63), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGE 488
+H+++ L+++D ++ DFGLA+ + S +++ VN DL E
Sbjct: 151 IHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVN-DLEE 193
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 17/153 (11%)
Query: 349 SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYS 408
++AVK + + ++ + E+ LRHPN+ + ++ +Y S G L+
Sbjct: 45 ELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFE 104
Query: 409 LL--QGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR--I 464
+ G +E + F+ + G+++ H Q H+++ L+D R I
Sbjct: 105 RICNAGRFSEDEARFFFQQLIS---GVSYA-HAMQ--VAHRDLKLENTLLDGSPAPRLKI 158
Query: 465 MDFGLAK--LMTSSDESSFVNGDLGEFGYIAPE 495
DFG +K ++ S +S+ +G YIAPE
Sbjct: 159 ADFGYSKASVLHSQPKSA-----VGTPAYIAPE 186
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 24/50 (48%)
Query: 171 LNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDKAD 220
L L L N+L P L+ +L+K S+ANNDLT G + D
Sbjct: 126 LQELYLKGNELKTLPPGLLTPTPKLEKLSLANNDLTELPAGLLNGLENLD 175
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,807,977
Number of Sequences: 62578
Number of extensions: 713367
Number of successful extensions: 3168
Number of sequences better than 100.0: 863
Number of HSP's better than 100.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 546
Number of HSP's that attempted gapping in prelim test: 2011
Number of HSP's gapped (non-prelim): 909
length of query: 611
length of database: 14,973,337
effective HSP length: 105
effective length of query: 506
effective length of database: 8,402,647
effective search space: 4251739382
effective search space used: 4251739382
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)