Query 035917
Match_columns 611
No_of_seqs 677 out of 4428
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 12:42:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035917.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035917hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 5.7E-55 1.9E-59 453.6 18.0 259 324-590 41-321 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 2.4E-55 8.1E-60 450.4 14.0 257 324-591 13-292 (299)
3 3omv_A RAF proto-oncogene seri 100.0 5.3E-55 1.8E-59 448.2 16.4 254 324-590 36-302 (307)
4 4gt4_A Tyrosine-protein kinase 100.0 5.7E-55 1.9E-59 449.4 15.6 252 327-586 29-304 (308)
5 3hmm_A TGF-beta receptor type- 100.0 2E-52 7E-57 430.6 19.1 265 324-591 3-300 (303)
6 4g3f_A NF-kappa-beta-inducing 100.0 6.1E-52 2.1E-56 429.7 17.3 255 324-593 58-321 (336)
7 4ase_A Vascular endothelial gr 100.0 2.2E-52 7.6E-57 437.7 13.6 265 317-591 57-350 (353)
8 4fih_A Serine/threonine-protei 100.0 7.7E-52 2.6E-56 430.2 14.5 248 324-582 74-324 (346)
9 3fpq_A Serine/threonine-protei 100.0 1.9E-51 6.5E-56 418.8 16.3 238 328-582 30-283 (290)
10 4b9d_A Serine/threonine-protei 100.0 4.5E-52 1.5E-56 432.7 11.0 247 324-582 24-277 (350)
11 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.3E-51 4.5E-56 422.3 11.9 248 324-582 32-285 (311)
12 4fie_A Serine/threonine-protei 100.0 1.2E-50 4.3E-55 431.3 15.6 248 324-582 151-401 (423)
13 3hyh_A Carbon catabolite-derep 100.0 4.3E-50 1.5E-54 405.4 14.8 244 324-582 13-263 (275)
14 4g31_A Eukaryotic translation 100.0 1.5E-49 5.1E-54 407.8 17.4 249 324-582 5-280 (299)
15 3ubd_A Ribosomal protein S6 ki 100.0 3.5E-50 1.2E-54 411.5 8.6 246 324-582 24-282 (304)
16 3uim_A Brassinosteroid insensi 100.0 1.5E-45 5.1E-50 383.0 21.4 281 311-592 17-315 (326)
17 4b99_A Mitogen-activated prote 100.0 5E-46 1.7E-50 396.0 18.2 251 324-582 54-345 (398)
18 2qkw_B Protein kinase; three-h 100.0 2.2E-45 7.5E-50 381.2 19.4 275 313-590 28-317 (321)
19 4f9c_A Cell division cycle 7-r 100.0 2.3E-45 7.7E-50 386.6 19.0 197 321-525 18-247 (361)
20 3v5w_A G-protein coupled recep 100.0 6.6E-45 2.2E-49 404.3 15.8 243 324-582 189-450 (689)
21 3uto_A Twitchin; kinase, muscl 100.0 6.3E-45 2.2E-49 405.7 15.7 247 323-582 156-411 (573)
22 3s95_A LIMK-1, LIM domain kina 100.0 7.5E-44 2.6E-48 367.6 19.3 261 324-591 10-285 (310)
23 3soc_A Activin receptor type-2 100.0 7E-44 2.4E-48 370.3 18.9 262 323-590 23-320 (322)
24 2nru_A Interleukin-1 receptor- 100.0 1.2E-42 4E-47 357.9 26.6 273 310-588 11-306 (307)
25 2psq_A Fibroblast growth facto 100.0 2.2E-43 7.6E-48 373.8 19.0 256 324-590 81-366 (370)
26 4hcu_A Tyrosine-protein kinase 100.0 1.5E-43 5.2E-48 357.5 16.4 257 324-589 10-267 (269)
27 3kul_A Ephrin type-A receptor 100.0 2.6E-43 8.8E-48 366.6 16.6 260 324-591 49-316 (325)
28 2qol_A Ephrin receptor; recept 100.0 2.7E-43 9.2E-48 373.6 16.1 261 323-591 44-312 (373)
29 3cbl_A C-FES, proto-oncogene t 100.0 7.9E-44 2.7E-48 378.3 11.3 257 323-590 113-376 (377)
30 3sxs_A Cytoplasmic tyrosine-pr 100.0 4.6E-43 1.6E-47 353.7 15.5 258 323-589 7-265 (268)
31 3fxz_A Serine/threonine-protei 100.0 9.8E-43 3.3E-47 357.6 18.0 249 323-582 19-270 (297)
32 3p86_A Serine/threonine-protei 100.0 8.3E-43 2.8E-47 360.3 17.5 261 322-592 35-302 (309)
33 2c30_A Serine/threonine-protei 100.0 1.9E-42 6.4E-47 359.5 19.9 259 313-582 24-295 (321)
34 3gen_A Tyrosine-protein kinase 100.0 5.6E-43 1.9E-47 356.0 14.8 258 323-589 23-281 (283)
35 3vhe_A Vascular endothelial gr 100.0 2.7E-43 9.3E-48 370.7 12.9 267 314-590 12-357 (359)
36 3poz_A Epidermal growth factor 100.0 6.6E-43 2.3E-47 363.8 14.6 257 324-589 15-279 (327)
37 3lb7_A RAF proto-oncogene seri 100.0 1.6E-42 5.6E-47 357.7 16.9 255 324-591 36-303 (307)
38 3tt0_A Basic fibroblast growth 100.0 2.3E-42 7.8E-47 367.6 17.6 260 323-594 68-358 (382)
39 3q4u_A Activin receptor type-1 100.0 8.9E-42 3.1E-46 349.8 20.5 259 323-586 7-300 (301)
40 3op5_A Serine/threonine-protei 100.0 5.5E-42 1.9E-46 362.2 19.4 266 322-594 33-335 (364)
41 1luf_A Muscle-specific tyrosin 100.0 1.6E-42 5.4E-47 362.4 15.1 261 321-591 44-338 (343)
42 3ugc_A Tyrosine-protein kinase 100.0 8.7E-43 3E-47 356.9 12.9 261 324-590 10-293 (295)
43 1tki_A Titin; serine kinase, m 100.0 6.7E-42 2.3E-46 355.4 19.1 247 323-582 4-258 (321)
44 1qcf_A Haematopoetic cell kina 100.0 1.1E-42 3.6E-47 378.7 13.6 259 322-590 186-446 (454)
45 3qd2_B Eukaryotic translation 100.0 1.3E-41 4.3E-46 353.3 20.6 250 323-582 5-326 (332)
46 3mdy_A Bone morphogenetic prot 100.0 1E-41 3.6E-46 355.1 19.9 263 321-591 34-334 (337)
47 2ivs_A Proto-oncogene tyrosine 100.0 4E-42 1.4E-46 354.6 16.3 256 323-589 22-312 (314)
48 3t9t_A Tyrosine-protein kinase 100.0 4E-42 1.4E-46 346.2 15.5 257 324-589 8-265 (267)
49 3l9p_A Anaplastic lymphoma kin 100.0 6.8E-43 2.3E-47 369.7 10.1 257 324-591 71-348 (367)
50 1opk_A P150, C-ABL, proto-onco 100.0 1.9E-42 6.5E-47 380.6 14.0 255 323-589 219-479 (495)
51 3fe3_A MAP/microtubule affinit 100.0 1.1E-41 3.7E-46 354.9 18.6 246 323-582 14-265 (328)
52 1t46_A HOMO sapiens V-KIT hard 100.0 4.7E-42 1.6E-46 353.9 15.1 258 323-590 22-309 (313)
53 2izr_A Casein kinase I isoform 100.0 1.2E-41 4E-46 354.6 17.9 256 324-593 9-286 (330)
54 1rjb_A FL cytokine receptor; k 100.0 4.7E-42 1.6E-46 359.3 14.7 259 322-590 43-336 (344)
55 3tki_A Serine/threonine-protei 100.0 1.9E-42 6.4E-47 359.9 11.3 249 324-582 7-262 (323)
56 1csn_A Casein kinase-1; phosph 100.0 3.4E-41 1.2E-45 345.0 20.3 263 324-594 10-289 (298)
57 1k9a_A Carboxyl-terminal SRC k 100.0 1.4E-41 4.8E-46 369.4 18.4 249 323-589 192-446 (450)
58 3zgw_A Maternal embryonic leuc 100.0 5E-42 1.7E-46 360.0 14.1 249 323-583 9-262 (347)
59 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.4E-42 1.5E-46 373.6 14.1 259 323-591 183-443 (452)
60 3qup_A Tyrosine-protein kinase 100.0 1.1E-41 3.8E-46 353.3 16.0 262 322-593 21-303 (323)
61 1mp8_A Focal adhesion kinase 1 100.0 1.2E-41 4.1E-46 346.1 15.7 254 324-590 15-278 (281)
62 3og7_A AKAP9-BRAF fusion prote 100.0 4.4E-42 1.5E-46 350.9 12.5 255 323-588 23-288 (289)
63 3kex_A Receptor tyrosine-prote 100.0 2.6E-42 8.7E-47 358.9 10.9 254 324-589 13-277 (325)
64 2eva_A TAK1 kinase - TAB1 chim 100.0 1.8E-41 6.2E-46 349.7 17.1 258 324-594 8-269 (307)
65 2yab_A Death-associated protei 100.0 1.9E-41 6.7E-46 357.5 17.6 246 323-582 11-273 (361)
66 3niz_A Rhodanese family protei 100.0 3.5E-41 1.2E-45 348.3 19.0 251 323-582 20-301 (311)
67 4eqm_A Protein kinase; transfe 100.0 1.7E-41 5.8E-46 347.7 16.5 261 324-595 11-282 (294)
68 3p1a_A MYT1 kinase, membrane-a 100.0 2.2E-41 7.6E-46 349.7 17.2 243 324-582 57-305 (311)
69 4euu_A Serine/threonine-protei 100.0 3.7E-41 1.3E-45 349.0 18.9 259 324-588 9-309 (319)
70 3g2f_A Bone morphogenetic prot 100.0 1.9E-41 6.4E-46 353.4 16.7 269 324-598 13-328 (336)
71 2pvf_A Fibroblast growth facto 100.0 2.1E-41 7.4E-46 353.2 17.2 262 323-592 34-322 (334)
72 1o6l_A RAC-beta serine/threoni 100.0 2.9E-41 9.8E-46 352.9 17.6 246 324-582 5-261 (337)
73 3c0i_A Peripheral plasma membr 100.0 1.2E-41 4.2E-46 357.9 14.9 248 324-582 24-287 (351)
74 2xir_A Vascular endothelial gr 100.0 8.5E-42 2.9E-46 352.5 13.1 267 316-592 19-314 (316)
75 3lxl_A Tyrosine-protein kinase 100.0 1.4E-41 4.8E-46 353.4 14.7 264 324-593 23-308 (327)
76 3dtc_A Mitogen-activated prote 100.0 1.5E-41 5.1E-46 343.0 14.0 252 324-586 7-271 (271)
77 3kfa_A Tyrosine-protein kinase 100.0 1.4E-41 4.7E-46 346.4 13.5 258 322-591 11-274 (288)
78 2y0a_A Death-associated protei 100.0 4.3E-41 1.5E-45 350.0 17.2 246 323-582 10-272 (326)
79 3kmu_A ILK, integrin-linked ki 100.0 2.8E-41 9.6E-46 340.3 15.3 250 324-588 10-270 (271)
80 3c1x_A Hepatocyte growth facto 100.0 2.9E-41 1E-45 357.8 16.2 257 325-592 90-359 (373)
81 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.3E-40 4.4E-45 351.7 20.9 255 322-591 63-342 (365)
82 4e5w_A Tyrosine-protein kinase 100.0 1.9E-41 6.6E-46 347.7 14.2 257 325-587 22-301 (302)
83 3lzb_A Epidermal growth factor 100.0 2.3E-41 7.9E-46 352.2 14.9 254 324-589 15-279 (327)
84 1ob3_A PFPK5, cell division co 100.0 3.1E-41 1.1E-45 344.4 15.5 250 324-582 2-281 (288)
85 1qpc_A LCK kinase; alpha beta 100.0 2.5E-41 8.6E-46 343.0 14.8 257 324-590 13-271 (279)
86 3pls_A Macrophage-stimulating 100.0 1E-40 3.4E-45 341.5 19.2 257 325-591 22-290 (298)
87 1u59_A Tyrosine-protein kinase 100.0 4.1E-41 1.4E-45 343.2 16.2 257 325-593 10-277 (287)
88 4aw2_A Serine/threonine-protei 100.0 1.3E-41 4.5E-46 367.2 13.1 258 314-582 64-339 (437)
89 3o0g_A Cell division protein k 100.0 5.6E-41 1.9E-45 343.1 17.0 250 324-582 2-283 (292)
90 2a19_B Interferon-induced, dou 100.0 5.5E-41 1.9E-45 340.8 16.7 252 323-593 10-279 (284)
91 3lxp_A Non-receptor tyrosine-p 100.0 6.4E-41 2.2E-45 347.3 17.5 259 326-592 33-314 (318)
92 3soa_A Calcium/calmodulin-depe 100.0 5.8E-41 2E-45 363.2 17.8 248 322-582 9-268 (444)
93 4f0f_A Serine/threonine-protei 100.0 3.6E-41 1.2E-45 343.3 15.3 244 324-586 19-287 (287)
94 3gxj_A TGF-beta receptor type- 100.0 1E-42 3.5E-47 357.0 3.7 264 323-591 2-300 (303)
95 3brb_A Proto-oncogene tyrosine 100.0 8E-41 2.7E-45 345.3 17.8 260 321-591 31-311 (313)
96 1mqb_A Ephrin type-A receptor 100.0 5E-41 1.7E-45 350.5 16.4 260 325-592 45-313 (333)
97 2bdw_A Hypothetical protein K1 100.0 4.2E-41 1.4E-45 355.3 15.9 247 322-582 27-285 (362)
98 3f66_A Hepatocyte growth facto 100.0 1.1E-40 3.7E-45 341.7 18.1 257 324-591 25-294 (298)
99 3dbq_A Dual specificity protei 100.0 1.8E-41 6.3E-46 355.2 12.6 248 324-583 9-275 (343)
100 2i1m_A Macrophage colony-stimu 100.0 1.8E-41 6.2E-46 353.2 12.4 258 323-590 45-328 (333)
101 3uc3_A Serine/threonine-protei 100.0 1.7E-41 6E-46 358.1 12.3 250 323-582 19-275 (361)
102 2zv2_A Calcium/calmodulin-depe 100.0 6E-41 2E-45 343.9 15.9 243 324-582 13-293 (298)
103 1p4o_A Insulin-like growth fac 100.0 1E-41 3.6E-46 353.1 9.9 263 317-589 18-300 (322)
104 2x4f_A Myosin light chain kina 100.0 3.6E-41 1.2E-45 357.2 14.0 242 328-582 93-343 (373)
105 2h8h_A Proto-oncogene tyrosine 100.0 1.6E-41 5.6E-46 376.6 11.8 258 323-590 266-525 (535)
106 4fvq_A Tyrosine-protein kinase 100.0 1.6E-41 5.5E-46 346.0 10.8 255 324-593 8-280 (289)
107 2zmd_A Dual specificity protei 100.0 5E-41 1.7E-45 358.3 15.1 248 324-583 56-322 (390)
108 3cc6_A Protein tyrosine kinase 100.0 8.9E-41 3E-45 339.5 16.1 254 323-589 11-274 (281)
109 2w4o_A Calcium/calmodulin-depe 100.0 5.3E-41 1.8E-45 352.7 14.5 247 322-582 51-306 (349)
110 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.5E-41 1.9E-45 350.5 14.6 243 324-582 9-259 (336)
111 3llt_A Serine/threonine kinase 100.0 7.9E-41 2.7E-45 352.4 15.8 203 314-525 25-259 (360)
112 1fot_A TPK1 delta, CAMP-depend 100.0 1.4E-40 4.9E-45 344.9 17.4 243 324-582 6-259 (318)
113 3v8s_A RHO-associated protein 100.0 2.5E-41 8.7E-46 362.2 12.0 254 316-582 61-330 (410)
114 2vd5_A DMPK protein; serine/th 100.0 3.6E-41 1.2E-45 361.2 13.1 257 314-582 51-328 (412)
115 2ozo_A Tyrosine-protein kinase 100.0 1.6E-40 5.5E-45 374.1 18.9 251 331-593 343-603 (613)
116 1kob_A Twitchin; kinase, intra 100.0 1.1E-40 3.9E-45 354.8 16.6 247 323-582 50-305 (387)
117 4fr4_A YANK1, serine/threonine 100.0 1.1E-40 3.9E-45 354.0 16.2 244 324-582 15-272 (384)
118 1u5q_A Serine/threonine protei 100.0 6.7E-41 2.3E-45 351.8 14.1 241 324-583 54-307 (348)
119 2yfx_A Tyrosine-protein kinase 100.0 3.8E-41 1.3E-45 350.1 12.0 257 323-591 29-307 (327)
120 4hgt_A Casein kinase I isoform 100.0 2.2E-40 7.5E-45 338.4 17.4 264 322-594 7-286 (296)
121 4dc2_A Protein kinase C IOTA t 100.0 1.7E-40 5.9E-45 353.9 17.3 251 323-582 51-319 (396)
122 3gni_B Strad alpha; kinase fol 100.0 1.7E-40 5.8E-45 353.9 17.0 201 323-526 24-238 (389)
123 3txo_A PKC-L, NPKC-ETA, protei 100.0 1E-40 3.4E-45 351.0 14.9 247 323-582 22-281 (353)
124 1b6c_B TGF-B superfamily recep 100.0 1.1E-39 3.8E-44 340.6 22.7 267 320-591 38-339 (342)
125 2h34_A Serine/threonine-protei 100.0 2.5E-40 8.5E-45 341.4 17.2 261 323-591 33-299 (309)
126 3cok_A Serine/threonine-protei 100.0 2.1E-40 7.1E-45 336.1 16.1 247 324-582 11-263 (278)
127 2wqm_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 339.3 18.6 263 323-593 31-302 (310)
128 2w1i_A JAK2; chromosomal rearr 100.0 1.4E-40 4.7E-45 345.9 14.6 261 324-590 41-324 (326)
129 2yex_A Serine/threonine-protei 100.0 1.6E-40 5.5E-45 336.2 14.6 250 323-582 6-262 (276)
130 3is5_A Calcium-dependent prote 100.0 1.6E-40 5.6E-45 338.7 14.7 249 324-582 22-279 (285)
131 3dls_A PAS domain-containing s 100.0 1.9E-40 6.5E-45 346.5 15.6 241 322-582 22-275 (335)
132 2pmi_A Negative RE, cyclin-dep 100.0 1.7E-40 5.9E-45 343.9 15.1 250 323-582 4-294 (317)
133 2buj_A Serine/threonine-protei 100.0 2.6E-40 8.7E-45 341.9 16.2 259 323-590 28-308 (317)
134 3a8x_A Protein kinase C IOTA t 100.0 7.8E-40 2.7E-44 343.3 19.9 250 324-582 9-276 (345)
135 2v62_A Serine/threonine-protei 100.0 6E-41 2.1E-45 351.6 11.3 259 324-590 37-330 (345)
136 3uzp_A CKI-delta, CKID, casein 100.0 5.2E-40 1.8E-44 335.9 17.8 263 323-594 8-286 (296)
137 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.7E-40 9.2E-45 347.4 15.8 243 324-582 41-294 (350)
138 2jii_A Serine/threonine-protei 100.0 9.7E-41 3.3E-45 350.9 12.2 260 324-594 42-342 (352)
139 1xjd_A Protein kinase C, theta 100.0 1.3E-40 4.6E-45 348.9 13.2 248 322-582 15-270 (345)
140 3kn6_A Ribosomal protein S6 ki 100.0 5.1E-40 1.8E-44 341.8 17.5 242 329-582 16-271 (325)
141 1byg_A CSK, protein (C-termina 100.0 1.6E-40 5.5E-45 337.1 13.2 249 323-589 20-274 (278)
142 3fdn_A Serine/threonine-protei 100.0 3E-40 1E-44 335.2 15.1 247 323-583 8-259 (279)
143 3kk8_A Calcium/calmodulin depe 100.0 4.1E-40 1.4E-44 334.8 16.0 247 323-582 5-262 (284)
144 1x8b_A WEE1HU, WEE1-like prote 100.0 5.8E-40 2E-44 333.4 16.9 243 322-582 9-280 (289)
145 3hko_A Calcium/calmodulin-depe 100.0 7.4E-40 2.5E-44 342.6 18.1 254 319-582 21-331 (345)
146 1fvr_A Tyrosine-protein kinase 100.0 2.9E-40 9.8E-45 343.5 14.9 257 324-591 25-303 (327)
147 3g33_A Cell division protein k 100.0 4.5E-40 1.5E-44 339.0 16.2 251 322-582 7-297 (308)
148 3a62_A Ribosomal protein S6 ki 100.0 2.8E-40 9.7E-45 344.0 14.8 246 324-582 17-277 (327)
149 1xbb_A Tyrosine-protein kinase 100.0 3E-40 1E-44 337.5 14.5 254 324-590 16-281 (291)
150 3ork_A Serine/threonine protei 100.0 6.1E-41 2.1E-45 346.2 9.5 255 324-589 12-282 (311)
151 2a2a_A Death-associated protei 100.0 5.7E-40 2E-44 340.5 16.7 246 323-582 11-273 (321)
152 4ejn_A RAC-alpha serine/threon 100.0 1.6E-40 5.5E-45 360.7 13.1 247 323-582 147-405 (446)
153 2y94_A 5'-AMP-activated protei 100.0 1.4E-39 4.8E-44 354.9 20.3 245 324-582 16-267 (476)
154 4fl3_A Tyrosine-protein kinase 100.0 3E-40 1E-44 372.9 15.2 247 330-589 375-632 (635)
155 1t4h_A Serine/threonine-protei 100.0 7.5E-40 2.6E-44 334.2 16.7 245 326-582 28-283 (290)
156 1nxk_A MAP kinase-activated pr 100.0 5.2E-40 1.8E-44 351.5 16.1 246 324-583 61-323 (400)
157 4eut_A Serine/threonine-protei 100.0 4.9E-40 1.7E-44 351.3 15.8 259 324-589 9-310 (396)
158 3ll6_A Cyclin G-associated kin 100.0 5.4E-40 1.9E-44 341.7 15.4 258 324-593 28-313 (337)
159 2eue_A Carbon catabolite derep 100.0 4.7E-40 1.6E-44 333.1 14.3 244 324-582 13-263 (275)
160 1zy4_A Serine/threonine-protei 100.0 2E-39 7E-44 331.9 19.1 253 323-582 5-284 (303)
161 2i0e_A Protein kinase C-beta I 100.0 4.7E-40 1.6E-44 345.8 14.5 247 323-582 19-277 (353)
162 3n9x_A Phosphotransferase; mal 100.0 2.5E-39 8.6E-44 349.8 20.2 195 323-522 25-249 (432)
163 3rp9_A Mitogen-activated prote 100.0 2.2E-39 7.6E-44 352.9 19.9 194 323-521 52-280 (458)
164 3fme_A Dual specificity mitoge 100.0 2.7E-40 9.2E-45 337.0 11.6 250 323-582 6-267 (290)
165 3f3z_A Calcium/calmodulin-depe 100.0 3.5E-39 1.2E-43 326.9 19.6 245 323-582 8-262 (277)
166 2clq_A Mitogen-activated prote 100.0 1.9E-39 6.6E-44 331.5 17.7 249 325-582 23-279 (295)
167 2x7f_A TRAF2 and NCK-interacti 100.0 2.4E-40 8.2E-45 343.5 10.9 260 314-582 14-287 (326)
168 4agu_A Cyclin-dependent kinase 100.0 1.8E-39 6.1E-44 334.7 17.2 250 324-582 3-285 (311)
169 3bhy_A Death-associated protei 100.0 1.2E-39 4.2E-44 331.0 15.5 252 324-589 5-275 (283)
170 1ua2_A CAK, cell division prot 100.0 8.9E-40 3E-44 342.8 14.7 253 321-582 7-292 (346)
171 2ac3_A MAP kinase-interacting 100.0 7.6E-40 2.6E-44 338.2 13.9 251 325-582 13-296 (316)
172 3pg1_A Mitogen-activated prote 100.0 2.7E-39 9.4E-44 340.8 18.0 264 315-588 13-325 (362)
173 1u46_A ACK-1, activated CDC42 100.0 3.8E-40 1.3E-44 336.0 11.1 254 324-590 18-286 (291)
174 3mtl_A Cell division protein k 100.0 3.4E-40 1.2E-44 342.8 10.9 257 324-589 2-291 (324)
175 3com_A Serine/threonine-protei 100.0 1.3E-39 4.5E-44 336.1 14.9 250 323-582 28-279 (314)
176 3eqc_A Dual specificity mitoge 100.0 5.9E-40 2E-44 345.8 12.5 195 324-525 33-230 (360)
177 2acx_A G protein-coupled recep 100.0 6.6E-40 2.3E-44 363.0 13.3 250 323-582 183-445 (576)
178 2vgo_A Serine/threonine-protei 100.0 1.8E-39 6E-44 330.4 15.4 244 324-582 14-263 (284)
179 3oz6_A Mitogen-activated prote 100.0 6.5E-40 2.2E-44 349.3 12.7 198 322-525 7-231 (388)
180 2y7j_A Phosphorylase B kinase 100.0 2.8E-39 9.5E-44 341.7 17.2 251 319-582 89-360 (365)
181 2qr7_A Ribosomal protein S6 ki 100.0 5.7E-40 1.9E-44 343.9 11.7 244 322-582 20-278 (342)
182 3byv_A Rhoptry kinase; malaria 100.0 2.4E-40 8.2E-45 351.4 8.8 245 323-587 72-367 (377)
183 3ttj_A Mitogen-activated prote 100.0 3.5E-39 1.2E-43 351.5 18.1 194 323-526 61-264 (464)
184 3gbz_A Kinase, CMGC CDK; ssgci 100.0 9.8E-40 3.4E-44 340.1 12.9 252 321-582 31-319 (329)
185 2jam_A Calcium/calmodulin-depe 100.0 2.2E-39 7.7E-44 333.1 15.4 246 323-582 8-262 (304)
186 3mi9_A Cell division protein k 100.0 2.9E-39 1E-43 339.3 16.5 255 324-582 17-312 (351)
187 3i6u_A CDS1, serine/threonine- 100.0 1E-39 3.6E-44 351.4 13.3 246 322-582 133-400 (419)
188 3a7i_A MST3 kinase, serine/thr 100.0 4.6E-39 1.6E-43 330.5 17.1 249 324-584 22-273 (303)
189 2vwi_A Serine/threonine-protei 100.0 1E-39 3.6E-44 334.5 12.2 254 323-582 14-288 (303)
190 2j7t_A Serine/threonine-protei 100.0 6E-40 2.1E-44 336.6 10.4 247 323-582 18-276 (302)
191 3an0_A Dual specificity mitoge 100.0 4.5E-40 1.5E-44 343.8 9.5 248 322-582 49-311 (340)
192 2r5t_A Serine/threonine-protei 100.0 1.2E-39 4E-44 345.3 12.6 242 323-577 37-285 (373)
193 2wtk_C Serine/threonine-protei 100.0 1.2E-38 4.1E-43 327.3 19.7 249 323-582 4-264 (305)
194 2h6d_A 5'-AMP-activated protei 100.0 8.5E-39 2.9E-43 323.6 18.2 244 324-582 11-262 (276)
195 3sv0_A Casein kinase I-like; t 100.0 1.1E-38 3.9E-43 348.3 20.4 262 323-593 6-283 (483)
196 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.5E-40 1.9E-44 339.5 9.5 260 323-592 32-306 (319)
197 3nyv_A Calmodulin-domain prote 100.0 1.6E-39 5.4E-44 356.6 13.6 245 323-582 25-282 (484)
198 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.5E-39 8.5E-44 357.3 14.9 247 324-582 185-449 (543)
199 2rku_A Serine/threonine-protei 100.0 4.6E-39 1.6E-43 329.0 15.7 247 324-583 15-267 (294)
200 4aaa_A Cyclin-dependent kinase 100.0 6.7E-39 2.3E-43 333.9 17.2 250 324-582 25-307 (331)
201 3lm5_A Serine/threonine-protei 100.0 2.8E-39 9.4E-44 336.4 14.1 254 320-582 24-288 (327)
202 3kvw_A DYRK2, dual specificity 100.0 4.2E-39 1.4E-43 347.7 15.9 194 323-525 96-299 (429)
203 2owb_A Serine/threonine-protei 100.0 2.9E-39 9.8E-44 337.4 14.1 247 323-582 40-292 (335)
204 3mwu_A Calmodulin-domain prote 100.0 4.2E-39 1.4E-43 353.4 16.1 245 323-582 21-277 (486)
205 3q5i_A Protein kinase; CDPK, m 100.0 1.3E-38 4.4E-43 351.1 20.0 246 322-582 34-302 (504)
206 2pml_X PFPK7, Ser/Thr protein 100.0 6.2E-39 2.1E-43 336.0 16.5 248 323-582 30-323 (348)
207 1wak_A Serine/threonine-protei 100.0 7.4E-39 2.5E-43 341.0 17.3 251 323-582 36-392 (397)
208 3cek_A Dual specificity protei 100.0 8.4E-40 2.9E-44 337.7 9.6 251 321-583 25-294 (313)
209 2r3i_A Cell division protein k 100.0 8E-39 2.7E-43 327.7 16.9 250 324-582 3-284 (299)
210 3nsz_A CK II alpha, casein kin 100.0 2.1E-38 7.1E-43 329.5 20.1 190 324-525 36-231 (330)
211 2w5a_A Serine/threonine-protei 100.0 6E-40 2.1E-44 332.7 8.0 255 323-587 5-273 (279)
212 1vzo_A Ribosomal protein S6 ki 100.0 8.7E-40 3E-44 344.3 9.4 249 323-583 53-323 (355)
213 3q60_A ROP5B; pseudokinase, tr 100.0 4.4E-40 1.5E-44 348.5 7.1 248 323-582 61-353 (371)
214 2j0j_A Focal adhesion kinase 1 100.0 4.9E-39 1.7E-43 364.4 15.6 258 323-590 389-653 (656)
215 3lij_A Calcium/calmodulin depe 100.0 5.6E-39 1.9E-43 353.1 15.6 251 323-588 36-300 (494)
216 3eb0_A Putative uncharacterize 100.0 5.2E-39 1.8E-43 341.8 13.9 256 320-588 3-330 (383)
217 1cm8_A Phosphorylated MAP kina 100.0 1.9E-38 6.5E-43 335.6 17.8 246 323-582 24-308 (367)
218 2xrw_A Mitogen-activated prote 100.0 2.6E-38 8.8E-43 335.0 18.5 250 323-582 24-319 (371)
219 1z57_A Dual specificity protei 100.0 1.2E-38 4E-43 331.6 15.6 193 324-525 14-234 (339)
220 1phk_A Phosphorylase kinase; g 100.0 7.8E-39 2.7E-43 327.6 13.8 246 323-582 16-284 (298)
221 3aln_A Dual specificity mitoge 100.0 6.8E-39 2.3E-43 333.0 12.9 249 324-582 22-286 (327)
222 3rgf_A Cyclin-dependent kinase 100.0 4.3E-38 1.5E-42 337.2 19.1 195 326-525 22-236 (405)
223 3qyz_A Mitogen-activated prote 100.0 3.3E-38 1.1E-42 333.2 17.9 251 323-582 26-314 (364)
224 1j1b_A Glycogen synthase kinas 100.0 3.2E-38 1.1E-42 339.9 17.8 246 324-582 54-337 (420)
225 2vx3_A Dual specificity tyrosi 100.0 3.4E-38 1.2E-42 335.4 17.3 198 322-526 52-259 (382)
226 2ycf_A Serine/threonine-protei 100.0 2.3E-38 8E-43 328.4 15.5 245 323-582 9-275 (322)
227 2b9h_A MAP kinase FUS3, mitoge 100.0 3.4E-38 1.2E-42 331.0 16.9 251 323-582 10-306 (353)
228 1q8y_A SR protein kinase; tran 100.0 2E-38 6.7E-43 335.2 15.1 248 324-582 19-334 (373)
229 3e3p_A Protein kinase, putativ 100.0 8.7E-38 3E-42 328.8 20.0 266 317-590 16-325 (360)
230 3fhr_A MAP kinase-activated pr 100.0 3E-38 1E-42 329.9 16.1 247 323-582 27-288 (336)
231 3pfq_A PKC-B, PKC-beta, protei 100.0 2.8E-38 9.7E-43 359.2 17.2 247 323-582 340-598 (674)
232 4e7w_A Glycogen synthase kinas 100.0 3.2E-38 1.1E-42 337.1 16.1 253 324-588 40-330 (394)
233 4exu_A Mitogen-activated prote 100.0 6.8E-38 2.3E-42 331.8 17.5 245 323-582 41-324 (371)
234 1blx_A Cyclin-dependent kinase 100.0 2.8E-38 9.7E-43 327.7 14.2 252 321-582 8-297 (326)
235 2wei_A Calmodulin-domain prote 100.0 3.4E-38 1.2E-42 321.6 14.4 246 322-582 20-277 (287)
236 3p23_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 342.9 13.0 250 324-582 24-284 (432)
237 2fst_X Mitogen-activated prote 100.0 3.2E-38 1.1E-42 333.8 14.5 246 323-582 28-312 (367)
238 2i6l_A Mitogen-activated prote 100.0 5.3E-38 1.8E-42 324.2 14.5 250 324-582 11-306 (320)
239 2eu9_A Dual specificity protei 100.0 1.2E-37 4.2E-42 326.2 16.8 193 324-525 19-239 (355)
240 3a99_A Proto-oncogene serine/t 100.0 1.6E-38 5.4E-43 329.7 9.4 241 322-582 41-294 (320)
241 3coi_A Mitogen-activated prote 100.0 2.7E-37 9.4E-42 324.6 18.0 244 324-582 24-306 (353)
242 2iwi_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 324.4 11.6 243 320-582 27-284 (312)
243 2dyl_A Dual specificity mitoge 100.0 7.2E-38 2.5E-42 323.3 12.6 244 323-582 24-284 (318)
244 2rio_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 337.2 14.5 249 326-582 17-296 (434)
245 2pzi_A Probable serine/threoni 100.0 1.7E-36 5.8E-41 346.1 14.8 237 324-587 80-327 (681)
246 3uqc_A Probable conserved tran 100.0 4.3E-36 1.5E-40 306.5 14.6 229 324-591 31-268 (286)
247 3qa8_A MGC80376 protein; kinas 100.0 2.4E-36 8.2E-41 337.9 12.8 260 324-589 14-310 (676)
248 3dzo_A Rhoptry kinase domain; 100.0 2.6E-36 9.1E-41 324.2 10.2 240 322-582 76-364 (413)
249 3m2w_A MAP kinase-activated pr 100.0 2.6E-35 9E-40 302.2 17.0 226 324-583 17-258 (299)
250 2vuw_A Serine/threonine-protei 100.0 2.7E-36 9.3E-41 314.8 6.7 240 323-582 19-332 (336)
251 4azs_A Methyltransferase WBDD; 100.0 4.5E-30 1.6E-34 285.9 8.2 181 332-522 242-435 (569)
252 1ogq_A PGIP-2, polygalacturona 99.9 2.2E-26 7.4E-31 237.7 12.4 166 46-217 2-173 (313)
253 3en9_A Glycoprotease, O-sialog 99.9 2.5E-27 8.5E-32 262.3 4.4 182 327-523 339-536 (540)
254 4ecn_A Leucine-rich repeat pro 99.9 6.3E-25 2.1E-29 254.3 6.5 161 47-215 266-539 (876)
255 4eco_A Uncharacterized protein 99.9 2.7E-24 9.3E-29 243.3 7.9 169 49-225 29-316 (636)
256 3rgz_A Protein brassinosteroid 99.9 8.3E-24 2.8E-28 244.5 10.7 171 45-224 7-210 (768)
257 1zar_A RIO2 kinase; serine kin 99.9 1.6E-23 5.5E-28 212.8 10.0 151 317-498 83-252 (282)
258 4fcg_A Uncharacterized protein 99.8 3.6E-22 1.2E-26 207.4 2.6 167 47-218 24-207 (328)
259 3rgz_A Protein brassinosteroid 99.8 8E-21 2.7E-25 219.5 7.9 137 101-239 613-751 (768)
260 1zth_A RIO1 serine protein kin 99.8 2.3E-19 7.9E-24 179.7 7.4 136 326-473 49-219 (258)
261 3e6j_A Variable lymphocyte rec 99.7 5.1E-18 1.7E-22 166.8 13.0 146 81-229 17-174 (229)
262 2v9t_B SLIT homolog 2 protein 99.7 1.4E-17 4.7E-22 162.7 11.7 148 81-229 9-167 (220)
263 2o6s_A Variable lymphocyte rec 99.7 2.8E-17 9.4E-22 158.7 13.0 148 81-229 5-163 (208)
264 1w8a_A SLIT protein; signaling 99.7 1.8E-17 6E-22 158.3 11.4 150 81-231 6-166 (192)
265 2v70_A SLIT-2, SLIT homolog 2 99.7 1.3E-17 4.5E-22 162.8 10.6 148 81-229 9-168 (220)
266 1ogq_A PGIP-2, polygalacturona 99.7 6.6E-18 2.3E-22 174.0 5.3 136 97-236 175-312 (313)
267 2o6r_A Variable lymphocyte rec 99.7 1.2E-16 4.2E-21 150.1 9.8 129 81-210 5-141 (177)
268 3m19_A Variable lymphocyte rec 99.7 1.2E-16 4E-21 159.1 9.4 128 97-225 36-166 (251)
269 4fcg_A Uncharacterized protein 99.6 4.8E-16 1.6E-20 161.2 9.5 120 97-219 184-303 (328)
270 4gyi_A RIO2 kinase; protein ki 99.6 1.4E-16 4.9E-21 166.6 5.5 135 326-472 97-264 (397)
271 4g8a_A TOLL-like receptor 4; l 99.6 9.5E-16 3.3E-20 172.2 10.5 161 64-225 8-184 (635)
272 1w8a_A SLIT protein; signaling 99.6 1.7E-15 6E-20 144.4 10.5 127 99-229 11-141 (192)
273 3m19_A Variable lymphocyte rec 99.6 2.7E-15 9.2E-20 149.2 11.8 133 96-229 59-194 (251)
274 2wfh_A SLIT homolog 2 protein 99.6 2.2E-15 7.6E-20 143.8 9.6 124 101-229 15-141 (193)
275 3rfs_A Internalin B, repeat mo 99.6 5.3E-15 1.8E-19 148.9 12.1 132 97-229 86-220 (272)
276 2o6q_A Variable lymphocyte rec 99.6 4E-15 1.4E-19 149.6 10.7 119 97-216 38-156 (270)
277 2v70_A SLIT-2, SLIT homolog 2 99.6 3.3E-15 1.1E-19 145.7 9.5 113 97-210 58-170 (220)
278 2je0_A Acidic leucine-rich nuc 99.6 9E-16 3.1E-20 139.8 4.0 121 96-219 17-142 (149)
279 2z81_A CD282 antigen, TOLL-lik 99.6 2.4E-15 8.3E-20 166.5 7.4 135 82-218 3-149 (549)
280 2wfh_A SLIT homolog 2 protein 99.6 8E-15 2.7E-19 139.9 9.8 128 81-210 8-143 (193)
281 3v47_A TOLL-like receptor 5B a 99.5 4.6E-15 1.6E-19 160.3 8.8 143 82-225 7-165 (455)
282 2xot_A Amphoterin-induced prot 99.5 1.4E-14 4.7E-19 152.2 10.7 143 81-224 16-173 (361)
283 3vq2_A TLR4, TOLL-like recepto 99.5 1.3E-14 4.5E-19 162.7 11.1 128 96-224 32-163 (606)
284 3v47_A TOLL-like receptor 5B a 99.5 1.8E-14 6.1E-19 155.7 9.7 133 97-230 276-411 (455)
285 3oja_A Leucine-rich immune mol 99.5 1.1E-14 3.9E-19 159.1 8.0 142 82-229 108-252 (487)
286 3g39_A Variable lymphocyte rec 99.5 4.4E-14 1.5E-18 131.9 10.1 107 100-210 13-119 (170)
287 2ell_A Acidic leucine-rich nuc 99.5 7.8E-15 2.7E-19 136.4 5.0 111 97-210 25-137 (168)
288 4b8c_D Glucose-repressible alc 99.5 9.8E-15 3.3E-19 167.1 6.8 159 48-217 130-316 (727)
289 2z62_A TOLL-like receptor 4, v 99.5 4.4E-14 1.5E-18 142.3 10.7 122 97-219 29-151 (276)
290 1p9a_G Platelet glycoprotein I 99.5 6E-14 2E-18 142.7 11.6 131 96-229 77-210 (290)
291 2o6q_A Variable lymphocyte rec 99.5 7.2E-14 2.5E-18 140.4 11.9 132 97-229 86-220 (270)
292 4eco_A Uncharacterized protein 99.5 4.7E-15 1.6E-19 167.5 3.6 126 96-224 206-363 (636)
293 2z66_A Variable lymphocyte rec 99.5 2.4E-14 8.2E-19 146.4 8.3 142 81-224 5-160 (306)
294 1dce_A Protein (RAB geranylger 99.5 2.3E-14 7.9E-19 159.2 8.8 109 97-211 442-551 (567)
295 2z66_A Variable lymphocyte rec 99.5 2.2E-14 7.5E-19 146.7 7.8 131 97-228 127-262 (306)
296 2r9u_A Variable lymphocyte rec 99.5 6.5E-14 2.2E-18 131.3 10.1 106 99-208 15-120 (174)
297 1ozn_A Reticulon 4 receptor; N 99.5 2.8E-14 9.7E-19 144.4 8.1 131 97-228 106-239 (285)
298 1ozn_A Reticulon 4 receptor; N 99.5 9.3E-14 3.2E-18 140.6 11.7 128 96-224 32-163 (285)
299 2z80_A TOLL-like receptor 2, v 99.5 2.4E-14 8.1E-19 149.7 7.5 141 81-224 28-184 (353)
300 3rfs_A Internalin B, repeat mo 99.5 9.9E-14 3.4E-18 139.6 11.6 114 96-210 109-222 (272)
301 3oja_B Anopheles plasmodium-re 99.5 3.2E-14 1.1E-18 159.5 8.9 120 98-218 53-172 (597)
302 2v9t_B SLIT homolog 2 protein 99.5 5.3E-14 1.8E-18 137.1 9.1 113 96-209 56-168 (220)
303 2o6s_A Variable lymphocyte rec 99.5 7.8E-14 2.7E-18 134.3 9.8 113 97-210 53-165 (208)
304 2id5_A Lingo-1, leucine rich r 99.5 7.1E-14 2.4E-18 152.1 10.4 134 84-218 12-153 (477)
305 2xot_A Amphoterin-induced prot 99.5 2.9E-14 1E-18 149.7 6.9 133 96-229 64-204 (361)
306 4b8c_D Glucose-repressible alc 99.5 1.7E-14 5.9E-19 165.0 5.4 115 96-215 224-338 (727)
307 3vq2_A TLR4, TOLL-like recepto 99.5 3.1E-14 1.1E-18 159.6 7.4 131 97-229 425-560 (606)
308 1ziw_A TOLL-like receptor 3; i 99.5 1.1E-13 3.8E-18 157.4 11.9 128 96-224 25-155 (680)
309 3j0a_A TOLL-like receptor 5; m 99.5 6.9E-14 2.4E-18 163.1 10.4 131 83-217 14-148 (844)
310 3e6j_A Variable lymphocyte rec 99.5 9.2E-14 3.2E-18 136.2 9.6 113 96-210 64-176 (229)
311 2o6r_A Variable lymphocyte rec 99.5 2.8E-13 9.4E-18 127.0 11.7 126 99-228 10-138 (177)
312 4g8a_A TOLL-like receptor 4; l 99.5 6.6E-14 2.3E-18 157.1 8.7 132 97-229 446-582 (635)
313 2ifg_A High affinity nerve gro 99.5 1.2E-13 4E-18 143.9 9.6 112 83-210 8-120 (347)
314 4ecn_A Leucine-rich repeat pro 99.4 3.2E-14 1.1E-18 164.8 5.8 126 96-225 448-606 (876)
315 2ft3_A Biglycan; proteoglycan, 99.4 3.3E-13 1.1E-17 139.7 12.2 140 81-224 31-182 (332)
316 3cvr_A Invasion plasmid antige 99.4 4E-14 1.4E-18 156.8 4.9 122 84-225 49-171 (571)
317 2z62_A TOLL-like receptor 4, v 99.4 1.1E-13 3.9E-18 139.3 7.6 118 97-215 53-171 (276)
318 1wwl_A Monocyte differentiatio 99.4 4.3E-14 1.5E-18 145.2 4.0 127 97-225 96-239 (312)
319 4glp_A Monocyte differentiatio 99.4 3.8E-13 1.3E-17 137.9 10.9 112 97-211 146-268 (310)
320 2ell_A Acidic leucine-rich nuc 99.4 4E-13 1.4E-17 124.7 9.9 111 97-211 50-164 (168)
321 4ezg_A Putative uncharacterize 99.4 1.6E-13 5.4E-18 131.1 7.2 106 98-207 68-173 (197)
322 3j0a_A TOLL-like receptor 5; m 99.4 4.9E-14 1.7E-18 164.4 4.2 130 97-229 427-562 (844)
323 3oja_B Anopheles plasmodium-re 99.4 2.6E-13 9E-18 152.0 9.8 127 97-224 76-202 (597)
324 3zyi_A Leucine-rich repeat-con 99.4 3E-13 1E-17 146.3 9.8 140 85-225 56-207 (452)
325 3t6q_A CD180 antigen; protein- 99.4 3.3E-13 1.1E-17 151.3 10.2 139 85-224 14-163 (606)
326 1xku_A Decorin; proteoglycan, 99.4 3.9E-13 1.4E-17 138.9 10.0 134 81-218 29-172 (330)
327 2je0_A Acidic leucine-rich nuc 99.4 2.5E-13 8.7E-18 123.4 7.2 104 96-202 42-149 (149)
328 4ezg_A Putative uncharacterize 99.4 4.2E-13 1.5E-17 128.1 8.8 108 96-207 88-195 (197)
329 2z63_A TOLL-like receptor 4, v 99.4 2.9E-13 1E-17 150.3 8.8 131 98-229 398-533 (570)
330 1p9a_G Platelet glycoprotein I 99.4 5.9E-13 2E-17 135.3 9.9 110 97-210 56-165 (290)
331 3t6q_A CD180 antigen; protein- 99.4 3.4E-13 1.2E-17 151.2 8.4 120 97-217 401-524 (606)
332 2z63_A TOLL-like receptor 4, v 99.4 6.9E-13 2.4E-17 147.3 10.6 120 97-217 29-149 (570)
333 1wwl_A Monocyte differentiatio 99.4 2E-13 6.9E-18 140.2 5.5 114 98-213 151-272 (312)
334 3o6n_A APL1; leucine-rich repe 99.4 3.7E-13 1.3E-17 142.5 7.7 127 97-224 46-175 (390)
335 2z81_A CD282 antigen, TOLL-lik 99.4 2.9E-13 1E-17 149.7 7.2 122 96-218 50-173 (549)
336 2xwt_C Thyrotropin receptor; s 99.4 4.5E-13 1.5E-17 131.9 7.6 125 96-224 31-166 (239)
337 2z7x_B TOLL-like receptor 1, v 99.4 1.3E-12 4.3E-17 143.7 11.9 125 96-224 324-454 (520)
338 2z7x_B TOLL-like receptor 1, v 99.4 1.9E-13 6.4E-18 150.4 5.2 116 97-216 22-138 (520)
339 3zyj_A Leucine-rich repeat-con 99.4 1.1E-12 3.7E-17 141.3 10.6 139 85-224 45-195 (440)
340 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 6.5E-13 2.2E-17 147.7 8.6 125 96-224 52-179 (562)
341 3o6n_A APL1; leucine-rich repe 99.4 1.3E-12 4.5E-17 138.2 9.9 126 97-224 70-196 (390)
342 3zyj_A Leucine-rich repeat-con 99.3 1.3E-12 4.3E-17 140.9 9.6 129 98-229 162-294 (440)
343 3a79_B TLR6, VLRB.59, TOLL-lik 99.3 6.9E-13 2.4E-17 147.5 7.6 107 117-224 350-460 (562)
344 3g39_A Variable lymphocyte rec 99.3 1.8E-12 6.2E-17 120.8 8.5 104 82-186 8-119 (170)
345 2id5_A Lingo-1, leucine rich r 99.3 1E-12 3.4E-17 143.0 7.0 115 97-213 57-172 (477)
346 4glp_A Monocyte differentiatio 99.3 5.2E-13 1.8E-17 136.9 4.4 108 98-206 93-210 (310)
347 3zyi_A Leucine-rich repeat-con 99.3 2.1E-12 7.3E-17 139.6 9.3 111 116-229 192-305 (452)
348 3o53_A Protein LRIM1, AGAP0063 99.3 2E-12 6.8E-17 133.0 8.5 140 83-228 109-251 (317)
349 2z80_A TOLL-like receptor 2, v 99.3 1.3E-12 4.5E-17 136.3 7.3 121 96-219 76-200 (353)
350 1xku_A Decorin; proteoglycan, 99.3 3.4E-12 1.1E-16 131.9 10.0 114 97-215 146-261 (330)
351 3oja_A Leucine-rich immune mol 99.3 5.3E-13 1.8E-17 145.8 3.9 31 362-392 322-352 (487)
352 1ziw_A TOLL-like receptor 3; i 99.3 2.4E-12 8.2E-17 146.3 9.5 133 97-231 481-626 (680)
353 1a9n_A U2A', U2A'; complex (nu 99.3 1.1E-12 3.9E-17 122.8 5.4 108 97-211 20-130 (176)
354 2r9u_A Variable lymphocyte rec 99.3 4.7E-12 1.6E-16 118.5 9.4 104 122-229 14-120 (174)
355 1a9n_A U2A', U2A'; complex (nu 99.3 4.7E-12 1.6E-16 118.5 7.2 104 97-206 43-153 (176)
356 1ds9_A Outer arm dynein; leuci 99.3 3.7E-14 1.3E-18 135.7 -8.0 104 98-207 20-129 (198)
357 2xwt_C Thyrotropin receptor; s 99.2 5.9E-12 2E-16 123.8 6.3 125 97-225 81-216 (239)
358 3tm0_A Aminoglycoside 3'-phosp 99.2 2.1E-11 7.1E-16 121.6 9.8 144 321-471 11-212 (263)
359 2ifg_A High affinity nerve gro 99.2 1E-11 3.5E-16 129.2 7.7 104 123-229 11-118 (347)
360 2ft3_A Biglycan; proteoglycan, 99.2 1.1E-11 3.6E-16 128.3 7.3 126 97-227 173-307 (332)
361 1h6t_A Internalin B; cell adhe 99.2 2.3E-11 7.7E-16 123.6 9.3 117 97-224 69-188 (291)
362 1dce_A Protein (RAB geranylger 99.2 1.2E-11 4E-16 137.4 7.7 100 97-200 464-567 (567)
363 4fmz_A Internalin; leucine ric 99.2 1.9E-11 6.6E-16 126.9 8.4 121 97-224 222-343 (347)
364 3bz5_A Internalin-J, INLJ; leu 99.2 2.5E-11 8.5E-16 131.4 9.4 118 97-224 171-296 (457)
365 1ds9_A Outer arm dynein; leuci 99.2 1E-13 3.5E-18 132.6 -8.8 110 97-212 49-159 (198)
366 3cvr_A Invasion plasmid antige 99.2 2.5E-11 8.5E-16 134.4 8.9 96 98-211 102-197 (571)
367 1jl5_A Outer protein YOPM; leu 99.2 1.5E-12 5E-17 141.0 -1.3 94 123-225 74-184 (454)
368 1h6u_A Internalin H; cell adhe 99.2 4E-11 1.4E-15 122.8 9.4 102 97-207 64-165 (308)
369 3o53_A Protein LRIM1, AGAP0063 99.2 4.9E-12 1.7E-16 130.1 2.4 117 97-224 59-179 (317)
370 1h6t_A Internalin B; cell adhe 99.2 4.3E-11 1.5E-15 121.6 9.2 119 96-225 90-211 (291)
371 1m9s_A Internalin B; cell inva 99.2 3.2E-11 1.1E-15 134.8 8.7 105 97-210 66-170 (605)
372 1jl5_A Outer protein YOPM; leu 99.2 5.7E-11 2E-15 128.4 10.2 100 97-210 132-231 (454)
373 1nd4_A Aminoglycoside 3'-phosp 99.2 3.3E-11 1.1E-15 119.4 7.5 129 333-472 29-214 (264)
374 1xeu_A Internalin C; cellular 99.2 6.1E-11 2.1E-15 118.6 9.3 102 97-208 64-165 (263)
375 1m9s_A Internalin B; cell inva 99.1 6E-11 2E-15 132.6 9.9 103 97-208 88-190 (605)
376 1xeu_A Internalin C; cellular 99.1 5E-11 1.7E-15 119.2 8.4 117 97-225 42-161 (263)
377 1h6u_A Internalin H; cell adhe 99.1 5.5E-11 1.9E-15 121.8 8.7 104 97-209 86-189 (308)
378 3bz5_A Internalin-J, INLJ; leu 99.1 9.8E-11 3.4E-15 126.7 10.0 99 97-207 128-226 (457)
379 1o6v_A Internalin A; bacterial 99.1 9E-11 3.1E-15 127.3 8.8 103 97-208 244-346 (466)
380 1o6v_A Internalin A; bacterial 99.1 6.3E-11 2.1E-15 128.5 7.4 121 96-225 265-386 (466)
381 2ast_B S-phase kinase-associat 99.1 7.8E-12 2.7E-16 129.2 0.0 106 97-203 94-205 (336)
382 4ay9_X Follicle-stimulating ho 99.1 7.4E-11 2.5E-15 123.0 7.0 122 82-203 8-138 (350)
383 2ast_B S-phase kinase-associat 99.1 5.2E-12 1.8E-16 130.5 -1.9 116 97-214 71-191 (336)
384 3g06_A SSPH2 (leucine-rich rep 99.1 2.6E-11 9.1E-16 135.8 2.9 124 81-224 20-151 (622)
385 2ca6_A RAN GTPase-activating p 99.1 1.6E-11 5.6E-16 129.6 0.7 129 96-225 159-314 (386)
386 2ca6_A RAN GTPase-activating p 99.1 6.6E-12 2.3E-16 132.7 -2.6 129 96-225 122-285 (386)
387 4fmz_A Internalin; leucine ric 99.1 1.4E-10 4.7E-15 120.4 7.0 104 96-206 243-346 (347)
388 3goz_A Leucine-rich repeat-con 99.0 3.6E-11 1.2E-15 125.9 1.7 113 97-210 23-155 (362)
389 3goz_A Leucine-rich repeat-con 99.0 4.8E-11 1.6E-15 125.0 2.1 117 97-213 52-187 (362)
390 3dxp_A Putative acyl-COA dehyd 99.0 7.7E-10 2.6E-14 115.6 11.3 140 329-472 43-248 (359)
391 3g06_A SSPH2 (leucine-rich rep 99.0 1E-10 3.5E-15 131.0 4.6 88 120-217 221-308 (622)
392 3rw6_A Nuclear RNA export fact 99.0 3.3E-11 1.1E-15 120.1 -1.5 126 82-211 77-238 (267)
393 4ay9_X Follicle-stimulating ho 98.8 3.7E-09 1.3E-13 110.1 7.4 109 100-213 13-124 (350)
394 1z7x_W Ribonuclease inhibitor; 98.8 3.3E-10 1.1E-14 122.2 -1.9 130 96-225 256-409 (461)
395 3sg8_A APH(2'')-ID; antibiotic 98.8 4.2E-09 1.4E-13 107.4 5.8 189 329-527 25-289 (304)
396 1z7x_W Ribonuclease inhibitor; 98.8 2.7E-10 9.4E-15 122.8 -3.7 129 96-225 227-381 (461)
397 3rw6_A Nuclear RNA export fact 98.7 1.8E-08 6E-13 100.3 6.5 81 117-200 167-258 (267)
398 3un9_A NLR family member X1; l 98.6 6.6E-09 2.3E-13 109.1 1.1 129 97-225 102-250 (372)
399 3r70_A Aminoglycoside phosphot 98.6 3.4E-07 1.2E-11 93.9 12.3 137 325-473 38-238 (320)
400 3un9_A NLR family member X1; l 98.5 3.1E-09 1.1E-13 111.7 -4.2 113 97-210 127-256 (372)
401 3ogk_B Coronatine-insensitive 98.4 2.3E-08 7.8E-13 111.3 -1.0 128 97-225 379-524 (592)
402 1io0_A Tropomodulin; LRR prote 98.4 8.1E-08 2.8E-12 90.4 1.3 110 96-206 36-164 (185)
403 3d1u_A Putative fructosamine-3 98.3 3.2E-06 1.1E-10 85.3 13.0 74 329-406 20-97 (288)
404 3tdw_A Gentamicin resistance p 98.3 3E-06 1E-10 86.3 12.8 135 330-472 25-224 (306)
405 4gkh_A Aminoglycoside 3'-phosp 98.3 4.1E-06 1.4E-10 83.3 11.9 135 331-472 31-223 (272)
406 3ogk_B Coronatine-insensitive 98.2 9.2E-08 3.1E-12 106.4 -1.1 82 118-201 162-251 (592)
407 3ovc_A Hygromycin-B 4-O-kinase 98.1 1.3E-05 4.4E-10 83.7 10.6 140 329-473 46-244 (362)
408 3ats_A Putative uncharacterize 98.0 4.2E-06 1.4E-10 86.9 6.1 78 330-407 26-121 (357)
409 2p1m_B Transport inhibitor res 98.0 4.3E-07 1.5E-11 100.9 -2.1 114 97-214 106-232 (594)
410 2p1m_B Transport inhibitor res 98.0 4.4E-07 1.5E-11 100.8 -2.5 126 97-224 373-516 (594)
411 3sb4_A Hypothetical leucine ri 97.9 8E-06 2.7E-10 83.8 5.8 98 119-219 225-323 (329)
412 3sb4_A Hypothetical leucine ri 97.9 8.7E-06 3E-10 83.6 5.5 101 97-200 227-328 (329)
413 1io0_A Tropomodulin; LRR prote 97.9 2.7E-06 9.2E-11 79.9 1.5 97 111-208 27-138 (185)
414 2q83_A YTAA protein; 2635576, 97.9 5.6E-05 1.9E-09 77.4 11.6 137 331-471 39-251 (346)
415 2olc_A MTR kinase, methylthior 97.8 9E-05 3.1E-09 78.0 10.7 73 330-404 36-120 (397)
416 2ra8_A Uncharacterized protein 97.7 1.9E-06 6.5E-11 89.9 -3.0 110 96-208 172-294 (362)
417 3jr1_A Putative fructosamine-3 97.5 0.00062 2.1E-08 69.2 12.5 135 330-468 42-232 (312)
418 1zyl_A Hypothetical protein YI 97.4 0.0032 1.1E-07 63.9 16.4 157 313-472 10-223 (328)
419 3f7w_A Putative fructosamine-3 97.3 0.0011 3.8E-08 66.3 11.6 74 329-406 20-97 (288)
420 2ra8_A Uncharacterized protein 97.3 9E-05 3.1E-09 77.1 3.4 109 97-210 140-269 (362)
421 2pyw_A Uncharacterized protein 97.3 0.0012 4.2E-08 69.9 11.5 76 441-519 231-310 (420)
422 2ppq_A HSK, HK, homoserine kin 97.1 0.0016 5.5E-08 66.1 10.2 156 314-471 7-216 (322)
423 3dxq_A Choline/ethanolamine ki 97.1 0.0012 4.1E-08 66.5 8.9 136 329-472 23-202 (301)
424 3csv_A Aminoglycoside phosphot 96.9 0.0031 1.1E-07 64.3 9.8 138 331-472 25-217 (333)
425 3rfe_A Platelet glycoprotein I 96.9 0.001 3.4E-08 58.3 5.2 55 100-157 12-67 (130)
426 4fdw_A Leucine rich hypothetic 96.9 0.0017 5.7E-08 68.5 7.7 79 97-179 158-236 (401)
427 3rfe_A Platelet glycoprotein I 96.8 0.0012 4E-08 57.9 5.2 55 124-181 12-67 (130)
428 4fdw_A Leucine rich hypothetic 96.8 0.0015 5E-08 68.9 6.9 102 97-203 227-333 (401)
429 3feg_A Choline/ethanolamine ki 96.7 0.0052 1.8E-07 64.1 10.1 139 330-472 56-254 (379)
430 1nw1_A Choline kinase (49.2 KD 96.7 0.0029 9.8E-08 67.3 8.1 72 330-406 79-159 (429)
431 3e4g_A ATP synthase subunit S, 96.6 0.00043 1.5E-08 63.9 0.9 83 97-179 62-149 (176)
432 3c5i_A Choline kinase; choline 96.5 0.0043 1.5E-07 64.4 7.6 73 330-406 39-121 (369)
433 3e4g_A ATP synthase subunit S, 96.4 0.0013 4.6E-08 60.6 3.0 84 120-204 61-150 (176)
434 1pgv_A TMD-1, tropomodulin TMD 96.2 0.0011 3.7E-08 62.4 1.2 42 116-158 66-111 (197)
435 2yle_A Protein spire homolog 1 96.2 0.041 1.4E-06 52.1 11.5 101 404-522 33-133 (229)
436 2qg7_A Ethanolamine kinase PV0 96.1 0.013 4.6E-07 62.6 9.3 73 330-406 114-188 (458)
437 3i1a_A Spectinomycin phosphotr 96.0 0.022 7.7E-07 58.2 10.0 32 441-472 205-236 (339)
438 1pgv_A TMD-1, tropomodulin TMD 95.2 0.0062 2.1E-07 57.2 1.8 87 116-203 37-136 (197)
439 3f2s_A CK, chetk-alpha, cholin 94.6 0.074 2.5E-06 55.6 8.4 139 330-472 58-280 (401)
440 3mes_A Choline kinase; malaria 93.5 0.23 7.9E-06 52.3 9.5 138 330-472 76-291 (424)
441 4h09_A Hypothetical leucine ri 93.3 0.17 5.8E-06 52.1 8.2 81 116-200 259-340 (379)
442 4gt6_A Cell surface protein; l 92.3 0.12 4E-06 53.9 5.2 101 98-205 267-369 (394)
443 4gt6_A Cell surface protein; l 92.1 0.2 6.7E-06 52.1 6.6 84 115-203 260-344 (394)
444 4fs7_A Uncharacterized protein 91.4 0.17 5.8E-06 52.6 5.2 55 144-201 296-351 (394)
445 4fs7_A Uncharacterized protein 90.6 0.19 6.6E-06 52.2 4.7 84 115-203 292-376 (394)
446 3g15_A CK, chetk-alpha, cholin 88.9 0.43 1.5E-05 49.8 5.8 29 444-472 246-280 (401)
447 4h09_A Hypothetical leucine ri 88.7 0.7 2.4E-05 47.4 7.2 85 115-203 235-320 (379)
448 2ks1_B Epidermal growth factor 86.1 0.97 3.3E-05 30.9 4.1 19 245-263 11-29 (44)
449 2l2t_A Receptor tyrosine-prote 85.4 1.4 4.9E-05 30.0 4.7 28 245-273 10-37 (44)
450 2jwa_A Receptor tyrosine-prote 83.5 1.9 6.5E-05 29.4 4.6 9 248-256 14-22 (44)
451 3cxl_A N-chimerin; SH2, RHO-GA 76.7 0.38 1.3E-05 51.3 -1.0 58 330-390 148-215 (463)
452 4ano_A ESSB; membrane protein, 73.0 11 0.00036 35.6 8.0 118 377-530 48-167 (219)
453 4ann_A ESSB; membrane protein, 72.5 10 0.00036 35.5 7.9 118 377-530 43-162 (215)
454 1cja_A Protein (actin-fragmin 30.1 3.2E+02 0.011 27.2 10.6 132 335-472 79-237 (342)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=5.7e-55 Score=453.57 Aligned_cols=259 Identities=20% Similarity=0.314 Sum_probs=200.1
Q ss_pred hcCCCCCeeeecCCceEEEEEeC------CCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP------DGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~------~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
++|...+.||+|+||.||+|++. +++.||||+++... ...++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 35666789999999999999864 47899999997643 345789999999999999999999999999999999
Q ss_pred EEeccCCCChHHhhhcCC--------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCe
Q 035917 397 IYKYMSSGTLYSLLQGNA--------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDA 462 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~--------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~ 462 (611)
|||||++|+|.++++... .+++|.+++.|+.|||+||+||| +.+|+||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 999999999999997532 35999999999999999999999 7899999999999999999999
Q ss_pred EEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhh
Q 035917 463 RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEA 541 (611)
Q Consensus 463 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~ 541 (611)
||+|||+|+.+.............||+.|||||++.+..|+.++|||||||++|||++ |+.||.+........ .+.+.
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~-~i~~g 276 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID-CITQG 276 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHH-HHHHT
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHH-HHHcC
Confidence 9999999997654433333344579999999999999999999999999999999998 788874311100000 00000
Q ss_pred hchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 542 IDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 542 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
..+. .+...++++. +|+.+||+.||++||||+||+++|+.+.+..
T Consensus 277 ~~~~-~p~~~~~~~~---~li~~cl~~dP~~RPs~~ei~~~L~~l~~~p 321 (329)
T 4aoj_A 277 RELE-RPRACPPEVY---AIMRGCWQREPQQRHSIKDVHARLQALAQAP 321 (329)
T ss_dssp CCCC-CCTTCCHHHH---HHHHHHCCSSTTTSCCHHHHHHHHHHHHHSC
T ss_pred CCCC-CcccccHHHH---HHHHHHcCcChhHCcCHHHHHHHHHHHhhCC
Confidence 0111 1223344444 4555999999999999999999999998763
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.4e-55 Score=450.36 Aligned_cols=257 Identities=23% Similarity=0.347 Sum_probs=207.0
Q ss_pred hcCCCCCeeeecCCceEEEEEeC------CCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP------DGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~------~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
++|...+.||+|+||.||+|++. +++.||||+++... ...++|.+|+++|++++|||||+++|+|.+++..+|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 35667789999999999999863 47899999997643 345789999999999999999999999999999999
Q ss_pred EEeccCCCChHHhhhcCC------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEE
Q 035917 397 IYKYMSSGTLYSLLQGNA------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl 464 (611)
|||||++|+|.++|+..+ ..++|..++.|+.|||+||+||| +++|+||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997532 36999999999999999999999 789999999999999999999999
Q ss_pred eecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhc
Q 035917 465 MDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAID 543 (611)
Q Consensus 465 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~ 543 (611)
+|||+|+...............||+.|||||++.+..|+.++|||||||++|||++ |+.||....... ....+.
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~-----~~~~i~ 244 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE-----VIECIT 244 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH-----HHHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH-----HHHHHH
Confidence 99999997654333222233469999999999999999999999999999999998 788874321110 000111
Q ss_pred hh---hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 544 KA---LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 544 ~~---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
.. ..+...++++.+ ++.+||+.||++||||+||++.|+++.+..+
T Consensus 245 ~~~~~~~p~~~~~~~~~---li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 245 QGRVLQRPRTCPQEVYE---LMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp HTCCCCCCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred cCCCCCCCccchHHHHH---HHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 00 112233444444 5559999999999999999999999988754
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-55 Score=448.18 Aligned_cols=254 Identities=25% Similarity=0.335 Sum_probs=198.7
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
+++...+.||+|+||+||+|++.+ .||||+++... ...++|.+|+++|++++|||||+++|+|.+ +..+|||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 456667899999999999999753 69999997533 234679999999999999999999998854 568999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
|++|+|.++|+.....++|..++.|+.|||+||+||| +.+||||||||+|||+++++.+||+|||+|+.........
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~ 189 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcce
Confidence 9999999999876667999999999999999999999 7899999999999999999999999999998765433333
Q ss_pred cccCCCcccccccccccCC---CCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhh--cCCC
Q 035917 481 FVNGDLGEFGYIAPEYSST---MVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKAL--CGKG 550 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l--~~~~ 550 (611)
.....+||+.|||||++.+ .+|+.++|||||||++|||++|+.||.+. +......+ ...+.+ ....
T Consensus 190 ~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~----~~~p~~~~~~~~ 265 (307)
T 3omv_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG----YASPDLSKLYKN 265 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTT----CCCCCSTTSCTT
T ss_pred eecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcC----CCCCCccccccc
Confidence 3445679999999998853 46899999999999999999999998431 11111111 011111 1122
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
.++++.+ ++.+||+.||++||||.||+++|+.+....
T Consensus 266 ~~~~l~~---li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 266 CPKAMKR---LVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp SCHHHHH---HHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred chHHHHH---HHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 3344444 555999999999999999999999886543
No 4
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=5.7e-55 Score=449.42 Aligned_cols=252 Identities=23% Similarity=0.291 Sum_probs=201.7
Q ss_pred CCCCeeeecCCceEEEEEeC------CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 327 CSENVIISTRTGTTYKAMLP------DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 327 ~~~~~ig~G~~g~Vy~~~~~------~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
...+.||+|+||+||+|++. +++.||||+++... ...++|.+|+.+|++++|||||+++|+|.+++..+|||
T Consensus 29 ~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~ 108 (308)
T 4gt4_A 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIF 108 (308)
T ss_dssp EEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEE
Confidence 34578999999999999862 46899999996533 33578999999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeE
Q 035917 399 KYMSSGTLYSLLQGNA---------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~k 463 (611)
|||++|+|.++|.... ..++|..+++|+.|||+||+||| +.+||||||||+|||+++++.+|
T Consensus 109 Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~~K 185 (308)
T 4gt4_A 109 SYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVK 185 (308)
T ss_dssp ECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEE
T ss_pred EcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCCEE
Confidence 9999999999996431 25899999999999999999999 78999999999999999999999
Q ss_pred EeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhh
Q 035917 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAI 542 (611)
Q Consensus 464 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~ 542 (611)
|+|||+|+.+.............||+.|||||++.++.|+.++|||||||++|||++ |..||....... ..+.+
T Consensus 186 i~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~-----~~~~i 260 (308)
T 4gt4_A 186 ISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQD-----VVEMI 260 (308)
T ss_dssp ECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHH-----HHHHH
T ss_pred ECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHH-----HHHHH
Confidence 999999997654433333445579999999999999999999999999999999998 777875321110 01111
Q ss_pred chhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHc
Q 035917 543 DKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSI 586 (611)
Q Consensus 543 ~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 586 (611)
........++.....+.+++.+||+.||++||||.||+++|+.+
T Consensus 261 ~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 261 RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 11111111122223455566699999999999999999999864
No 5
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-52 Score=430.55 Aligned_cols=265 Identities=22% Similarity=0.294 Sum_probs=199.6
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCC----eeEEEEe
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE----EKLLIYK 399 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~----~~~lv~e 399 (611)
+++...+.||+|+||+||+|++ +|+.||||+++........++.|+..+.+++|||||+++|+|..++ ..+||||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 3456678999999999999998 6899999999765444444566777788999999999999998754 5799999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhc-----CCCCeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHG-----CQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
||++|+|.++++.. .++|..+.+++.|+++||+|||+. ..++|+||||||+|||+|.++++||+|||+|+...
T Consensus 82 y~~~gsL~~~l~~~--~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 82 YHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CCCCCcHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 99999999999864 589999999999999999999943 13499999999999999999999999999998765
Q ss_pred CCCCC--ccccCCCcccccccccccCCC------CCCcccchHHHHHHHHHHhCCCCCH----------HHHHHH-----
Q 035917 475 SSDES--SFVNGDLGEFGYIAPEYSSTM------VASLKGDVYGIGVVLLELAGFKGNL----------VDWVNQ----- 531 (611)
Q Consensus 475 ~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~t~ksDV~SfGvvl~ell~~~~~~----------~~~~~~----- 531 (611)
..... ......+||+.|||||++.+. .++.++|||||||++|||++|..++ .++...
T Consensus 160 ~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~ 239 (303)
T 3hmm_A 160 SATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVE 239 (303)
T ss_dssp TTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHH
T ss_pred CCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHH
Confidence 43322 122345799999999998654 4678999999999999999875432 111000
Q ss_pred HhhcCChhhhhchhhcCC-CCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 532 LSSSGRSKEAIDKALCGK-GYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 532 ~~~~~~~~~~~~~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
........+..++.+... ...+....+.+++.+||+.||++||||.||+++|+++.++.+
T Consensus 240 ~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ 300 (303)
T 3hmm_A 240 EMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp HHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcC
Confidence 000000001111111111 112345667788889999999999999999999999987654
No 6
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=6.1e-52 Score=429.68 Aligned_cols=255 Identities=16% Similarity=0.122 Sum_probs=205.9
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccC
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMS 402 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~ 402 (611)
+.|...+.||+|+||.||+|+. .+|+.||||+++.... ..+|+.+|++++|||||++++++.+++..|||||||+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~ 133 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLE 133 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCT
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccC
Confidence 4677778999999999999996 5699999999975432 2579999999999999999999999999999999999
Q ss_pred CCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC-CeEEeecccccccCCCCCCc-
Q 035917 403 SGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF-DARIMDFGLAKLMTSSDESS- 480 (611)
Q Consensus 403 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~-~~kl~DFGla~~~~~~~~~~- 480 (611)
+|+|.++++.. ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++ .+||+|||+|+.+.......
T Consensus 134 gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 134 GGSLGQLIKQM-GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp TCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 99999999754 46999999999999999999999 89999999999999999887 69999999999875433211
Q ss_pred --cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhc----hhhcCCCCHHH
Q 035917 481 --FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID----KALCGKGYDEE 554 (611)
Q Consensus 481 --~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~ 554 (611)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||.... .......+.. ........+++
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~----~~~~~~~i~~~~~~~~~~~~~~s~~ 285 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF----RGPLCLKIASEPPPIREIPPSCAPL 285 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC----CSCCHHHHHHSCCGGGGSCTTSCHH
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC----HHHHHHHHHcCCCCchhcCccCCHH
Confidence 1223579999999999999999999999999999999999999984310 0001111111 01112344556
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 555 ILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
+.+++. +||+.||++|||+.|++++|....++.+..
T Consensus 286 ~~~li~---~~L~~dP~~R~sa~el~~~l~~~l~~~~~l 321 (336)
T 4g3f_A 286 TAQAIQ---EGLRKEPVHRASAMELRRKVGKALQEVGGL 321 (336)
T ss_dssp HHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHH---HHccCCHhHCcCHHHHHHHHHHHHhhhhhc
Confidence 666666 999999999999999999999988775543
No 7
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2.2e-52 Score=437.67 Aligned_cols=265 Identities=18% Similarity=0.233 Sum_probs=210.2
Q ss_pred HHHHHhhhcCCCCCeeeecCCceEEEEEeC------CCCEEEEEeccccc--hhHHHHHHHHHHHhccCC-CCccceeeE
Q 035917 317 ADLMAASNSFCSENVIISTRTGTTYKAMLP------DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRH-PNLAPLLGY 387 (611)
Q Consensus 317 ~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~~------~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H-~nIv~l~g~ 387 (611)
.+.+-..++|...+.||+|+||.||+|++. .++.||||+++... ...++|.+|+++|.+++| ||||+++|+
T Consensus 57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 344444567888899999999999999853 24689999997543 334679999999999965 899999999
Q ss_pred EEeC-CeeEEEEeccCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 035917 388 CVVE-EEKLLIYKYMSSGTLYSLLQGNA---------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICS 451 (611)
Q Consensus 388 ~~~~-~~~~lv~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp 451 (611)
|..+ +..++|||||++|+|.++|+... ..++|..++.++.|||+||+||| +.+||||||||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~ 213 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAA 213 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSG
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCc
Confidence 9765 56899999999999999996431 24899999999999999999999 78999999999
Q ss_pred CeEEeCCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHH
Q 035917 452 NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVN 530 (611)
Q Consensus 452 ~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~ 530 (611)
+|||+++++.+||+|||+|+.+............+||+.|||||++.+..|+.++|||||||++|||++ |+.||.....
T Consensus 214 ~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~ 293 (353)
T 4ase_A 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 293 (353)
T ss_dssp GGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred cceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999997755443333444579999999999999999999999999999999998 7888743100
Q ss_pred HHhhcCChhhhhchhh---cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 531 QLSSSGRSKEAIDKAL---CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 531 ~~~~~~~~~~~~~~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
.......+.... .+...++++. +++.+||+.||++|||+.||+++|+++.+...
T Consensus 294 ----~~~~~~~i~~g~~~~~p~~~~~~~~---~li~~c~~~dP~~RPt~~eil~~L~~llq~~~ 350 (353)
T 4ase_A 294 ----DEEFCRRLKEGTRMRAPDYTTPEMY---QTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 350 (353)
T ss_dssp ----SHHHHHHHHHTCCCCCCTTCCHHHH---HHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC
T ss_pred ----HHHHHHHHHcCCCCCCCccCCHHHH---HHHHHHcCcChhHCcCHHHHHHHHHHHHHHhh
Confidence 000111111111 1223344444 45559999999999999999999999987643
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.7e-52 Score=430.24 Aligned_cols=248 Identities=18% Similarity=0.265 Sum_probs=202.5
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEecc
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~ 401 (611)
+.|...+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+++..|||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 3577778999999999999996 479999999996543 33456899999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCcc
Q 035917 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481 (611)
Q Consensus 402 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~ 481 (611)
++|+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+.... ..
T Consensus 154 ~gg~L~~~l~~~--~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 226 (346)
T 4fih_A 154 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 226 (346)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CC
T ss_pred CCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Cc
Confidence 999999999753 5999999999999999999999 7899999999999999999999999999999775432 22
Q ss_pred ccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhc-CCCCHHHHHHHHH
Q 035917 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALC-GKGYDEEILQFLK 560 (611)
Q Consensus 482 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~l~~ 560 (611)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||.......... .+.+...+.+. ....++++.+++.
T Consensus 227 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-~i~~~~~~~~~~~~~~s~~~~dli~ 305 (346)
T 4fih_A 227 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPRLKNLHKVSPSLKGFLD 305 (346)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSSCCCCSCGGGSCHHHHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-HHHcCCCCCCCccccCCHHHHHHHH
Confidence 345689999999999999999999999999999999999999984311000000 00011111111 1123456666665
Q ss_pred HHhhcccCCCCCCCCHHHHHHH
Q 035917 561 VACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 561 l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+||+.||++|||+.|+++|
T Consensus 306 ---~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 306 ---RLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp ---HHSCSSTTTSCCHHHHTTC
T ss_pred ---HHcCCChhHCcCHHHHhcC
Confidence 9999999999999999886
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-51 Score=418.76 Aligned_cols=238 Identities=23% Similarity=0.320 Sum_probs=190.3
Q ss_pred CCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEe----CCeeEEEEe
Q 035917 328 SENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVV----EEEKLLIYK 399 (611)
Q Consensus 328 ~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~----~~~~~lv~e 399 (611)
..+.||+|+||+||+|+. .++..||||++.... ...+.|.+|+++|++++|||||+++++|.+ ++..+||||
T Consensus 30 ~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmE 109 (290)
T 3fpq_A 30 FDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTE 109 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred eeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEe
Confidence 346799999999999996 468999999996533 234679999999999999999999999875 345789999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCeEEeC-CCCCeEEeecccccccCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPP--FLHQNICSNVILVD-EDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILld-~~~~~kl~DFGla~~~~~~ 476 (611)
||++|+|.+++.+. ..+++..+..++.||+.||+||| +.+ |+||||||+|||++ .++.+||+|||+|+.....
T Consensus 110 y~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 110 LMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp CCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred CCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 99999999999754 46999999999999999999999 555 99999999999998 4789999999999865322
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCCCC
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGKGY 551 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~ 551 (611)
.....+||+.|||||++.+ +|+.++|||||||++|||++|+.||.+. +......+ ..+.......
T Consensus 186 ----~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~-----~~~~~~~~~~ 255 (290)
T 3fpq_A 186 ----FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSG-----VKPASFDKVA 255 (290)
T ss_dssp ----SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTT-----CCCGGGGGCC
T ss_pred ----ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcC-----CCCCCCCccC
Confidence 2234579999999998865 6999999999999999999999998431 11111111 1111111223
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 552 DEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 552 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++++.+++. +||+.||++|||++|+++|
T Consensus 256 ~~~~~~li~---~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 256 IPEVKEIIE---GCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp CHHHHHHHH---HHSCSSGGGSCCHHHHHTS
T ss_pred CHHHHHHHH---HHccCChhHCcCHHHHhcC
Confidence 345555555 9999999999999999875
No 10
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=4.5e-52 Score=432.66 Aligned_cols=247 Identities=19% Similarity=0.289 Sum_probs=197.1
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
++|...+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+++..|||||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5788889999999999999995 579999999996543 234679999999999999999999999999999999999
Q ss_pred ccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 400 YMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 400 y~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||++|+|.+++.... ..+++..++.|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 179 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV- 179 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH-
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc-
Confidence 999999999997544 46899999999999999999999 7899999999999999999999999999998764221
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh--hcCCCCHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA--LCGKGYDEEIL 556 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~ 556 (611)
......+||+.|||||++.+..|+.++|||||||++|||++|+.||........ ...+.... ......++++.
T Consensus 180 -~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~~~~~~~~~~s~~~~ 254 (350)
T 4b9d_A 180 -ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL----VLKIISGSFPPVSLHYSYDLR 254 (350)
T ss_dssp -HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHTCCCCCCTTSCHHHH
T ss_pred -ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH----HHHHHcCCCCCCCccCCHHHH
Confidence 112334699999999999999999999999999999999999998742100000 00011100 11223456666
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+++. +||+.||++|||+.|+++|
T Consensus 255 ~li~---~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 255 SLVS---QLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp HHHH---HHTCSSGGGSCCHHHHHTS
T ss_pred HHHH---HHccCChhHCcCHHHHhcC
Confidence 6666 9999999999999999976
No 11
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.3e-51 Score=422.32 Aligned_cols=248 Identities=17% Similarity=0.205 Sum_probs=205.5
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||+||+|+. .+|+.||||++++.. ...+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5688999999999999999995 579999999996532 23467999999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
|||++|+|.+++... +.+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 112 Ey~~gG~L~~~i~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 112 SYAKNGELLKYIRKI-GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred ecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 999999999999754 46999999999999999999999 78999999999999999999999999999998755444
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEILQ 557 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~ 557 (611)
.....+.+||+.|||||++.+..|+.++||||+||++|||++|+.||........ ...+.... ..+...++++.+
T Consensus 188 ~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~----~~~i~~~~~~~p~~~s~~~~d 263 (311)
T 4aw0_A 188 QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI----FAKIIKLEYDFPEKFFPKARD 263 (311)
T ss_dssp CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCCCTTCCHHHHH
T ss_pred cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCCCCcccCHHHHH
Confidence 3444566899999999999999999999999999999999999999842110000 00011100 012334566666
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 558 FLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++. +||+.||++|||++|++.+
T Consensus 264 li~---~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 264 LVE---KLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp HHH---HHSCSSGGGSTTSGGGTCH
T ss_pred HHH---HHccCCHhHCcChHHHcCC
Confidence 666 9999999999999987544
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.2e-50 Score=431.32 Aligned_cols=248 Identities=18% Similarity=0.266 Sum_probs=203.9
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEecc
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~ 401 (611)
+.|...+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+.+|++++|||||++++++.+++..|||||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 4577888999999999999996 569999999996543 33456899999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCcc
Q 035917 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481 (611)
Q Consensus 402 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~ 481 (611)
++|+|.+++... .+++..+..|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+.... ..
T Consensus 231 ~gG~L~~~i~~~--~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~ 303 (423)
T 4fie_A 231 EGGALTDIVTHT--RMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PR 303 (423)
T ss_dssp TTEEHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CC
T ss_pred CCCcHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cc
Confidence 999999999754 4999999999999999999999 7899999999999999999999999999999775432 22
Q ss_pred ccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cCCCCHHHHHHHHH
Q 035917 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CGKGYDEEILQFLK 560 (611)
Q Consensus 482 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~l~~ 560 (611)
....+||+.|||||++.+..|+.++|||||||++|||++|+.||.......... .+.....+.+ .....++++.+|++
T Consensus 304 ~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~-~i~~~~~~~~~~~~~~s~~~~dli~ 382 (423)
T 4fie_A 304 RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK-MIRDNLPPRLKNLHKVSPSLKGFLD 382 (423)
T ss_dssp BCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCSCTTSSCHHHHHHHH
T ss_pred ccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH-HHHcCCCCCCcccccCCHHHHHHHH
Confidence 345679999999999999999999999999999999999999984311000000 0011111111 11234566666666
Q ss_pred HHhhcccCCCCCCCCHHHHHHH
Q 035917 561 VACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 561 l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+||+.||++|||+.|+++|
T Consensus 383 ---~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 383 ---RLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp ---HHSCSSTTTSCCHHHHTTC
T ss_pred ---HHcCCChhHCcCHHHHhcC
Confidence 9999999999999999886
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.3e-50 Score=405.38 Aligned_cols=244 Identities=20% Similarity=0.295 Sum_probs=188.0
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5788899999999999999995 579999999996543 22467999999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||| +|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||+++++.+||+|||+|+......
T Consensus 93 Ey~-~g~L~~~l~~~-~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~- 166 (275)
T 3hyh_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp ECC-CEEHHHHHHHS-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred eCC-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-
Confidence 999 67999998765 46999999999999999999999 7899999999999999999999999999998764322
Q ss_pred CccccCCCcccccccccccCCCCC-CcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVA-SLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEIL 556 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~ 556 (611)
.....+||+.|||||++.+..+ +.++||||+||++|||++|+.||..-..... ...+.... ..+...++++.
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~----~~~i~~~~~~~p~~~s~~~~ 240 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL----FKNISNGVYTLPKFLSPGAA 240 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCCCTTSCHHHH
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCCCCCCCCCHHHH
Confidence 2234579999999999998876 5799999999999999999998742100000 00000000 01233456666
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+++. +||+.||++|||++|+++|
T Consensus 241 ~li~---~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 241 GLIK---RMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHH---HHSCSSGGGSCCHHHHHHC
T ss_pred HHHH---HHccCChhHCcCHHHHHcC
Confidence 6666 9999999999999999986
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.5e-49 Score=407.76 Aligned_cols=249 Identities=18% Similarity=0.280 Sum_probs=185.0
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCC--------
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE-------- 392 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~-------- 392 (611)
++|...+.||+|+||+||+|+. .+|+.||||+++... ...+++.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4688889999999999999995 579999999996432 33467999999999999999999999987644
Q ss_pred ----eeEEEEeccCCCChHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEee
Q 035917 393 ----EKLLIYKYMSSGTLYSLLQGNAT--ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466 (611)
Q Consensus 393 ----~~~lv~ey~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~D 466 (611)
..|+|||||++|+|.+++.+... ..++..++.|+.||++||+||| +.+|+||||||+|||++.++.+||+|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 36899999999999999986542 4677888999999999999999 78999999999999999999999999
Q ss_pred cccccccCCCCCC----------ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcC
Q 035917 467 FGLAKLMTSSDES----------SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSG 536 (611)
Q Consensus 467 FGla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~ 536 (611)
||+|+.+...... ...++.+||+.|||||++.+..|+.++|||||||++|||++ ||.........
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~-- 236 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRT-- 236 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHH--
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHH--
Confidence 9999977543211 11234579999999999999999999999999999999996 43211111000
Q ss_pred ChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 537 RSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 537 ~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
......... +...........+++.+||+.||++|||+.|+++|
T Consensus 237 -~~~~~~~~~-p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 280 (299)
T 4g31_A 237 -LTDVRNLKF-PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIEN 280 (299)
T ss_dssp -HHHHHTTCC-CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HHHHhcCCC-CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 000000000 00111222334456669999999999999999875
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.5e-50 Score=411.55 Aligned_cols=246 Identities=17% Similarity=0.187 Sum_probs=193.3
Q ss_pred hcCCCCCeeeecCCceEEEEEe----CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 324 NSFCSENVIISTRTGTTYKAML----PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~----~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
++|...+.||+|+||+||+|+. .+++.||||+++... ....++.+|+++|++++|||||++++++.+++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 4688889999999999999985 247899999996532 223468899999999999999999999999999999
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
|||||++|+|.+++.+. ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.....
T Consensus 104 vmEy~~gg~L~~~l~~~-~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~ 179 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH 179 (304)
T ss_dssp EECCCTTCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC----
T ss_pred EEEcCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCC
Confidence 99999999999999754 46999999999999999999999 789999999999999999999999999999865432
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEI 555 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~ 555 (611)
. ....+.+||+.|||||++.+..|+.++|||||||++|||++|+.||........ ...+.... ..+...++++
T Consensus 180 ~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~----~~~i~~~~~~~p~~~s~~~ 253 (304)
T 3ubd_A 180 E--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKET----MTMILKAKLGMPQFLSPEA 253 (304)
T ss_dssp ---CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCTTSCHHH
T ss_pred C--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHH----HHHHHcCCCCCCCcCCHHH
Confidence 2 223345799999999999999999999999999999999999999842110000 00011100 1123345666
Q ss_pred HHHHHHHhhcccCCCCCCCC-----HHHHHHH
Q 035917 556 LQFLKVACNCVVSRPKDRWS-----MYQVYQS 582 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 582 (611)
.+++. +||+.||++||| ++|+++|
T Consensus 254 ~~li~---~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 254 QSLLR---MLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp HHHHH---HHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred HHHHH---HHcccCHHHCCCCCcCCHHHHHcC
Confidence 66666 999999999998 4677765
No 16
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.5e-45 Score=382.96 Aligned_cols=281 Identities=40% Similarity=0.646 Sum_probs=235.4
Q ss_pred cccccHHHHHHhhhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccch--hHHHHHHHHHHHhccCCCCccceeeEE
Q 035917 311 LVKVKLADLMAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKL--GEKKFRNEMNRLGQLRHPNLAPLLGYC 388 (611)
Q Consensus 311 ~~~~~~~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~--~~~~~~~Ev~~l~~l~H~nIv~l~g~~ 388 (611)
...+++.++..++++|...+.||+|+||.||+|+..+|+.||||++..... ....+.+|++++++++||||+++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 96 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE
Confidence 456889999999999999999999999999999988899999999975432 224689999999999999999999999
Q ss_pred EeCCeeEEEEeccCCCChHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEe
Q 035917 389 VVEEEKLLIYKYMSSGTLYSLLQGNA---TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465 (611)
Q Consensus 389 ~~~~~~~lv~ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~ 465 (611)
..++..++||||+++|+|.+++.... ..++|..+..++.|++.||+|||+.+.++|+||||||+|||++.++.+||+
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~ 176 (326)
T 3uim_A 97 MTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG 176 (326)
T ss_dssp CCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC
T ss_pred ecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec
Confidence 99999999999999999999997653 259999999999999999999995434499999999999999999999999
Q ss_pred ecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHH-------------HHHHHH
Q 035917 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLV-------------DWVNQL 532 (611)
Q Consensus 466 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~-------------~~~~~~ 532 (611)
|||+++...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||. +|....
T Consensus 177 Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 255 (326)
T 3uim_A 177 DFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255 (326)
T ss_dssp CCSSCEECCSSS-SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTT
T ss_pred cCccccccCccc-ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHH
Confidence 999998764332 222334469999999999988889999999999999999999998874 233333
Q ss_pred hhcCChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCC
Q 035917 533 SSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGF 592 (611)
Q Consensus 533 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (611)
..........+..+......+....+.+++.+||+.||++|||+.||+++|+.......+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~ 315 (326)
T 3uim_A 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 315 (326)
T ss_dssp TSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSC
T ss_pred hhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhh
Confidence 333344455555555566777888899999999999999999999999999875544433
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=5e-46 Score=396.01 Aligned_cols=251 Identities=18% Similarity=0.256 Sum_probs=194.4
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEe------CCe
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVV------EEE 393 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~------~~~ 393 (611)
++|...+.||+|+||+||+|+. .+|+.||||+++... ...+.+.+|+++|++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 4688889999999999999995 579999999996543 234678899999999999999999998764 356
Q ss_pred eEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeeccccccc
Q 035917 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 394 ~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~ 473 (611)
.|||||||+ |+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+|+.+
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~-~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSS-QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSS-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEeCCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 899999996 6899999754 46999999999999999999999 789999999999999999999999999999876
Q ss_pred CCCC--CCccccCCCcccccccccccCCC-CCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhh-cCCh------
Q 035917 474 TSSD--ESSFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSS-SGRS------ 538 (611)
Q Consensus 474 ~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~-~~~~------ 538 (611)
.... ........+||+.|||||++.+. .++.++||||+||++|||++|+.||.. ....+.. .+..
T Consensus 209 ~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~ 288 (398)
T 4b99_A 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQ 288 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC
T ss_pred ccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence 4322 12233456899999999998765 469999999999999999999988731 1111110 0000
Q ss_pred -------hhhhchh--h-------cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 539 -------KEAIDKA--L-------CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 539 -------~~~~~~~--l-------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
...+... . .....++++.+|+. +||+.||++|||+.|+++|
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~---~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 289 AVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLG---RMLRFEPSARISAAAALRH 345 (398)
T ss_dssp -----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHH---HHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHH---HHCcCChhHCcCHHHHhcC
Confidence 0000000 0 00112344455544 9999999999999999987
No 18
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=2.2e-45 Score=381.15 Aligned_cols=275 Identities=35% Similarity=0.568 Sum_probs=229.5
Q ss_pred cccHHHHHHhhhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeC
Q 035917 313 KVKLADLMAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE 391 (611)
Q Consensus 313 ~~~~~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~ 391 (611)
.+.+.++..++++|...+.||+|+||.||+|+..+++.||||++.... ...+.+.+|+.++++++||||+++++++..+
T Consensus 28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 107 (321)
T 2qkw_B 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER 107 (321)
T ss_dssp --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence 344556667889999999999999999999998889999999986543 3457799999999999999999999999999
Q ss_pred CeeEEEEeccCCCChHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecc
Q 035917 392 EEKLLIYKYMSSGTLYSLLQGNA---TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468 (611)
Q Consensus 392 ~~~~lv~ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFG 468 (611)
+..++||||+++|+|.+++.... ..++|..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 108 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 108 NEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp TCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCT
T ss_pred CeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeecc
Confidence 99999999999999999997553 25899999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHH-----------HHHHHHhhcCC
Q 035917 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLV-----------DWVNQLSSSGR 537 (611)
Q Consensus 469 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~-----------~~~~~~~~~~~ 537 (611)
+++...............||+.|+|||++.+..++.++|||||||++|||++|+.||. .|.........
T Consensus 185 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 264 (321)
T 2qkw_B 185 ISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264 (321)
T ss_dssp TCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTC
T ss_pred cccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccccc
Confidence 9987543322222333458999999999988899999999999999999999987652 23333333333
Q ss_pred hhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 538 SKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 538 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
....+++.+......+....+.+++.+||+.||++|||+.|++++|+.+.+..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 265 LEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp CCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 44445555555556677778888888999999999999999999999987654
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.3e-45 Score=386.64 Aligned_cols=197 Identities=19% Similarity=0.230 Sum_probs=168.9
Q ss_pred HhhhcCCCCCeeeecCCceEEEEEe----CCCCEEEEEeccccchhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeE
Q 035917 321 AASNSFCSENVIISTRTGTTYKAML----PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKL 395 (611)
Q Consensus 321 ~~t~~f~~~~~ig~G~~g~Vy~~~~----~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~ 395 (611)
...+.|...+.||+|+||+||+|+. .+++.||||++.... ...++.+|+++|..+ +|||||++++++.+++..+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 4567799999999999999999984 247899999986543 345688999999998 6999999999999999999
Q ss_pred EEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCC-CCeEEeecccccccC
Q 035917 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED-FDARIMDFGLAKLMT 474 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~-~~~kl~DFGla~~~~ 474 (611)
+|||||++|+|.+++. .+++..+..++.|++.||+||| +.+|+||||||+|||++.+ +.+||+|||+|+...
T Consensus 97 lvmE~~~g~~L~~~~~----~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 97 IAMPYLEHESFLDILN----SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEECCCCCCHHHHHT----TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEeCCCcccHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 9999999999999984 3899999999999999999999 8899999999999999876 799999999998654
Q ss_pred CCCC--------------------------CccccCCCcccccccccccCCC-CCCcccchHHHHHHHHHHhCCCCCH
Q 035917 475 SSDE--------------------------SSFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVLLELAGFKGNL 525 (611)
Q Consensus 475 ~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl~ell~~~~~~ 525 (611)
.... ....+..+||+.|||||++.+. .|+.++||||+||++|||++|+.||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf 247 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCC
Confidence 3210 0112345799999999998775 4899999999999999999999887
No 20
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=6.6e-45 Score=404.31 Aligned_cols=243 Identities=19% Similarity=0.233 Sum_probs=198.1
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch----hHHHH---HHHHHHHhccCCCCccceeeEEEeCCeeE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL----GEKKF---RNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~----~~~~~---~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~ 395 (611)
++|...++||+|+||.||+|+. .+|+.||||++++... ....+ .+++.+++.++|||||++++++.+++..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 5788899999999999999995 4699999999965321 12223 34467778889999999999999999999
Q ss_pred EEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
+|||||+||+|.+++... ..+++..+..++.||+.||+||| +.+||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 269 lVmEy~~GGdL~~~l~~~-~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQH-GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp EEECCCCSCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EEEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999999754 46999999999999999999999 89999999999999999999999999999997754
Q ss_pred CCCCccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhh----c-hhhcCC
Q 035917 476 SDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAI----D-KALCGK 549 (611)
Q Consensus 476 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~----~-~~l~~~ 549 (611)
.. ..+.+||+.|||||++.. ..|+.++||||+||++|||++|..||.... .....++. . +...+.
T Consensus 345 ~~----~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~-----~~~~~~i~~~i~~~~~~~p~ 415 (689)
T 3v5w_A 345 KK----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK-----TKDKHEIDRMTLTMAVELPD 415 (689)
T ss_dssp CC----CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGG-----CCCHHHHHHHHHHCCCCCCT
T ss_pred CC----CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhhcCCCCCCCc
Confidence 32 234579999999999864 579999999999999999999999984310 00111111 1 111223
Q ss_pred CCHHHHHHHHHHHhhcccCCCCCCCC-----HHHHHHH
Q 035917 550 GYDEEILQFLKVACNCVVSRPKDRWS-----MYQVYQS 582 (611)
Q Consensus 550 ~~~~~~~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 582 (611)
..+.++.+++. +||+.||++|++ ++||++|
T Consensus 416 ~~S~~a~dLI~---~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 416 SFSPELRSLLE---GLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp TSCHHHHHHHH---HHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred cCCHHHHHHHH---HHccCCHhHCCCCCCCCHHHHhcC
Confidence 45667777666 999999999998 7899877
No 21
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.3e-45 Score=405.67 Aligned_cols=247 Identities=19% Similarity=0.306 Sum_probs=203.9
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++|++++|||||++++++.+++..++||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 35788889999999999999995 579999999996543 3456789999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCC--CCeEEeecccccccCCCCC
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED--FDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~--~~~kl~DFGla~~~~~~~~ 478 (611)
|++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+|||++.+ +.+||+|||+|+.+....
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~- 311 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ- 311 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS-
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC-
Confidence 9999999999766567999999999999999999999 7899999999999999854 899999999999875432
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCCCCHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGKGYDE 553 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~ 553 (611)
.....+||+.|||||++.+..|+.++||||+||++|||++|..||... ..... .... .+.. ......++
T Consensus 312 --~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~-~~~~--~~~~-~~~~~~s~ 385 (573)
T 3uto_A 312 --SVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVK-SCDW--NMDD-SAFSGISE 385 (573)
T ss_dssp --EEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH-TTCC--CCCS-GGGTTSCH
T ss_pred --ceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHH-hCCC--CCCc-ccccCCCH
Confidence 223347999999999999999999999999999999999999987421 11111 1000 0000 01123455
Q ss_pred HHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 554 EILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 554 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++.+|+. +||+.||++|||+.|+++|
T Consensus 386 ~~~dli~---~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 386 DGKDFIR---KLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp HHHHHHH---TTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHH---HHccCChhHCcCHHHHhcC
Confidence 6666666 9999999999999999986
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.5e-44 Score=367.61 Aligned_cols=261 Identities=23% Similarity=0.382 Sum_probs=209.2
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEecccc-chhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEecc
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTC-KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~-~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~ 401 (611)
++|...+.||+|+||.||+|+. .+++.||+|++... ....+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 4677789999999999999996 46999999988653 344578999999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc-
Q 035917 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS- 480 (611)
Q Consensus 402 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~- 480 (611)
++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 999999999876567999999999999999999999 7899999999999999999999999999998764332111
Q ss_pred -----------cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcC-ChhhhhchhhcC
Q 035917 481 -----------FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSG-RSKEAIDKALCG 548 (611)
Q Consensus 481 -----------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~ 548 (611)
......||+.|+|||++.+..++.++|||||||++|||++|..++........... ......+. ...
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 245 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR-YCP 245 (310)
T ss_dssp -------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH-TCC
T ss_pred ccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc-cCC
Confidence 01134699999999999999999999999999999999998877643211111111 11111111 112
Q ss_pred CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 549 KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 549 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
...++++.+ ++.+||+.||++|||+.|+++.|+.+.+...
T Consensus 246 ~~~~~~l~~---li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~ 285 (310)
T 3s95_A 246 PNCPPSFFP---ITVRCCDLDPEKRPSFVKLEHWLETLRMHLA 285 (310)
T ss_dssp TTCCTTHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHHhcc
Confidence 233344444 5559999999999999999999999987753
No 23
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7e-44 Score=370.32 Aligned_cols=262 Identities=23% Similarity=0.280 Sum_probs=205.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCC----eeEEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE----EKLLIY 398 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~----~~~lv~ 398 (611)
.++|...+.||+|+||.||+|+.. ++.||||+++........+.+|+.++.+++||||+++++++.... ..++||
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCchHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 357888899999999999999975 799999999776656667788999999999999999999998754 369999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC----------CeeecCCCCCeEEeCCCCCeEEeecc
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQP----------PFLHQNICSNVILVDEDFDARIMDFG 468 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~----------~ivHrDlkp~NILld~~~~~kl~DFG 468 (611)
||+++|+|.+++... .++|..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+|||
T Consensus 102 e~~~~g~L~~~l~~~--~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg 176 (322)
T 3soc_A 102 AFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFG 176 (322)
T ss_dssp ECCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeEEEccCC
Confidence 999999999999764 4899999999999999999999 66 99999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCcccccccccccCC-----CCCCcccchHHHHHHHHHHhCCCCCHHHH--------HHHHhhc
Q 035917 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSST-----MVASLKGDVYGIGVVLLELAGFKGNLVDW--------VNQLSSS 535 (611)
Q Consensus 469 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~SfGvvl~ell~~~~~~~~~--------~~~~~~~ 535 (611)
+++...............||+.|+|||++.+ ..++.++|||||||++|||++|+.||... .......
T Consensus 177 ~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~ 256 (322)
T 3soc_A 177 LALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQH 256 (322)
T ss_dssp TCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSS
T ss_pred cccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccC
Confidence 9987754433333344579999999999876 35667899999999999999997765210 0000000
Q ss_pred CChhhhhch----hhcCC-----CCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 536 GRSKEAIDK----ALCGK-----GYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 536 ~~~~~~~~~----~l~~~-----~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
....+..+. ..... ........+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 257 PSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp CCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 011111100 00000 01123345666777999999999999999999999998764
No 24
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1.2e-42 Score=357.86 Aligned_cols=273 Identities=28% Similarity=0.453 Sum_probs=221.9
Q ss_pred CcccccHHHHHHhhhcCCCC------CeeeecCCceEEEEEeCCCCEEEEEeccccc-----hhHHHHHHHHHHHhccCC
Q 035917 310 PLVKVKLADLMAASNSFCSE------NVIISTRTGTTYKAMLPDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRH 378 (611)
Q Consensus 310 ~~~~~~~~~l~~~t~~f~~~------~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~-----~~~~~~~~Ev~~l~~l~H 378 (611)
....|++.++..++++|... +.||+|+||.||+|.. +++.||||++.... ...+.+.+|+.++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34578999999999999988 8999999999999987 68899999986421 234679999999999999
Q ss_pred CCccceeeEEEeCCeeEEEEeccCCCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe
Q 035917 379 PNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNA--TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456 (611)
Q Consensus 379 ~nIv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 456 (611)
|||+++++++...+..++||||+++|+|.+++.... ..++|..+..++.|++.||.||| +.+|+||||||+||++
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 999999999999999999999999999999986432 46999999999999999999999 7899999999999999
Q ss_pred CCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHH---------
Q 035917 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD--------- 527 (611)
Q Consensus 457 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~--------- 527 (611)
+.++.+||+|||+++...............||+.|+|||.+.+ .++.++||||||+++|||++|..||..
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~ 245 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLD 245 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHH
Confidence 9999999999999987654333323334569999999998875 589999999999999999999887632
Q ss_pred HHHHHhh-cCChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchh
Q 035917 528 WVNQLSS-SGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588 (611)
Q Consensus 528 ~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 588 (611)
+...... .....+.+++.+ ..........+.+++.+||+.||++|||+.+|+++|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 1111111 111222222222 22344555667778889999999999999999999998754
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.2e-43 Score=373.84 Aligned_cols=256 Identities=20% Similarity=0.272 Sum_probs=205.6
Q ss_pred hcCCCCCeeeecCCceEEEEEe--------CCCCEEEEEeccccc--hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCC
Q 035917 324 NSFCSENVIISTRTGTTYKAML--------PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEE 392 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~--------~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~ 392 (611)
++|...+.||+|+||.||+|+. .++..||||+++... ...+++.+|+++++++ +||||++++++|..++
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 5677889999999999999985 235689999997543 2346799999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC
Q 035917 393 EKLLIYKYMSSGTLYSLLQGNA---------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD 457 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld 457 (611)
..++||||+++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEEC
Confidence 9999999999999999997542 24899999999999999999999 78999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcC
Q 035917 458 EDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSG 536 (611)
Q Consensus 458 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~ 536 (611)
.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-----~ 312 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-----E 312 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----G
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-----H
Confidence 999999999999987654332222333457889999999988899999999999999999998 7777643100 0
Q ss_pred Chhhhhchhh---cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 537 RSKEAIDKAL---CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 537 ~~~~~~~~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
.....+.... .....++++.+ ++.+||+.||++||++.|++++|+.+....
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~l~~---li~~~l~~dP~~Rpt~~ell~~L~~il~~~ 366 (370)
T 2psq_A 313 ELFKLLKEGHRMDKPANCTNELYM---MMRDCWHAVPSQRPTFKQLVEDLDRILTLT 366 (370)
T ss_dssp GHHHHHHTTCCCCCCTTSCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 0111111111 11223344555 445999999999999999999999988654
No 26
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-43 Score=357.54 Aligned_cols=257 Identities=21% Similarity=0.317 Sum_probs=210.1
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccCC
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~~ 403 (611)
++|...+.||+|+||.||+|+..+++.||+|++.......+++.+|++++++++||||+++++++.+++..++||||+++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 89 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEH 89 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCC
Confidence 46777789999999999999998899999999987766778899999999999999999999999999999999999999
Q ss_pred CChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCcccc
Q 035917 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVN 483 (611)
Q Consensus 404 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 483 (611)
|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 90 ~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 165 (269)
T 4hcu_A 90 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSST 165 (269)
T ss_dssp CBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTT
T ss_pred CcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEeccccccccccccc-ccccc
Confidence 9999999876667999999999999999999999 7899999999999999999999999999998764321 11223
Q ss_pred CCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHHHHH
Q 035917 484 GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVA 562 (611)
Q Consensus 484 ~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~ 562 (611)
...+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......... ...... ........++++.+++.
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~li~-- 241 (269)
T 4hcu_A 166 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-DISTGF-RLYKPRLASTHVYQIMN-- 241 (269)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-HHHTTC-CCCCCTTSCHHHHHHHH--
T ss_pred CcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHH-HHhcCc-cCCCCCcCCHHHHHHHH--
Confidence 3457889999999988899999999999999999998 787764211110000 000000 01112223455555555
Q ss_pred hhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 563 CNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 563 ~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
+||+.||++||++.|++++|+++.+.
T Consensus 242 -~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 242 -HCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp -HHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -HHccCCcccCcCHHHHHHHHHHHHHc
Confidence 99999999999999999999998864
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.6e-43 Score=366.63 Aligned_cols=260 Identities=20% Similarity=0.319 Sum_probs=204.7
Q ss_pred hcCCCCCeeeecCCceEEEEEeC----CCCEEEEEecccc--chhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP----DGSVLAVKRLNTC--KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~----~g~~vAvK~~~~~--~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
+.|...+.||+|+||.||+|+.. .+..||||+++.. ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45667799999999999999974 3556999999753 23456799999999999999999999999998999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
|||+++|+|.+++......+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 9999999999999766567999999999999999999999 7899999999999999999999999999998765432
Q ss_pred C-CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHH
Q 035917 478 E-SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEI 555 (611)
Q Consensus 478 ~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 555 (611)
. ........+|+.|+|||++.+..++.++|||||||++|||++ |..||.......... ........ ......++++
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~l 283 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVIS-SVEEGYRL-PAPMGCPHAL 283 (325)
T ss_dssp -CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHH-HHHTTCCC-CCCTTCCHHH
T ss_pred cceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHH-HHHcCCCC-CCCCCcCHHH
Confidence 2 112223356889999999988889999999999999999998 888874311110000 00000000 0112234445
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 556 LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
.+ ++.+||+.||++|||+.||++.|+.+.+...
T Consensus 284 ~~---li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 284 HQ---LMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp HH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred HH---HHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 55 4459999999999999999999999987644
No 28
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.7e-43 Score=373.58 Aligned_cols=261 Identities=20% Similarity=0.311 Sum_probs=196.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC----CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP----DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
.++|...+.||+|+||.||+|+.. ++..||||+++... ...++|.+|+.++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357889999999999999999864 57789999997542 334679999999999999999999999999999999
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++......+++..++.++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999999999876667999999999999999999999 789999999999999999999999999999876533
Q ss_pred CCC-ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHH
Q 035917 477 DES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEE 554 (611)
Q Consensus 477 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 554 (611)
... .......+|+.|+|||++.+..++.++|||||||++|||++ |+.||....... ..+.+............
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~-----~~~~i~~~~~~~~~~~~ 275 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-----VIKAVDEGYRLPPPMDC 275 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHH-----HHHHHHTTEECCCCTTC
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCccc
Confidence 211 11122246778999999998899999999999999999997 888874321110 11111111111111112
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 555 ILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
...+.+++.+||+.||++||++.||++.|+.+.+..+
T Consensus 276 ~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~ 312 (373)
T 2qol_A 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNPG 312 (373)
T ss_dssp BHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCGG
T ss_pred cHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCcc
Confidence 2344555559999999999999999999999987643
No 29
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.9e-44 Score=378.26 Aligned_cols=257 Identities=23% Similarity=0.326 Sum_probs=205.7
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
.++|...+.||+|+||.||+|+.. +++.||||.++... ...++|.+|+++|++++||||+++++++..++..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 356777899999999999999975 79999999997542 223568999999999999999999999999899999999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~ 479 (611)
|+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 99999999999765456899999999999999999999 789999999999999999999999999999865332111
Q ss_pred ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchh---hcCCCCHHHH
Q 035917 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKA---LCGKGYDEEI 555 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~ 555 (611)
.......+++.|+|||.+.+..++.++|||||||++|||++ |..||....... ..+.+... ..+...++++
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~l 344 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ-----TREFVEKGGRLPCPELCPDAV 344 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHH-----HHHHHHTTCCCCCCTTCCHHH
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHHH
Confidence 11111235778999999988889999999999999999998 787764321110 00111110 1122234445
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 556 LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
.+ ++.+||+.||++|||+.+|++.|+++.+++
T Consensus 345 ~~---li~~cl~~dP~~Rps~~~i~~~L~~i~~~~ 376 (377)
T 3cbl_A 345 FR---LMEQCWAYEPGQRPSFSTIYQELQSIRKRH 376 (377)
T ss_dssp HH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HH---HHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence 55 555999999999999999999999998764
No 30
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=4.6e-43 Score=353.70 Aligned_cols=258 Identities=20% Similarity=0.301 Sum_probs=210.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccC
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMS 402 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~ 402 (611)
.++|...+.||+|+||.||+|...++..||||+++......+++.+|++++.+++||||+++++++..++..++||||++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYIS 86 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccC
Confidence 35677789999999999999999888899999998776677889999999999999999999999999999999999999
Q ss_pred CCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCccc
Q 035917 403 SGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV 482 (611)
Q Consensus 403 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 482 (611)
+|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 87 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-~~~ 162 (268)
T 3sxs_A 87 NGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-VSS 162 (268)
T ss_dssp TCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-EEC
T ss_pred CCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhh-hcc
Confidence 99999999765556999999999999999999999 78999999999999999999999999999987654332 222
Q ss_pred cCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHHHH
Q 035917 483 NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKV 561 (611)
Q Consensus 483 ~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l 561 (611)
....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......... .... ..........++++.+++.
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~li~- 239 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVL-KVSQ-GHRLYRPHLASDTIYQIMY- 239 (268)
T ss_dssp CSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-HHHT-TCCCCCCTTSCHHHHHHHH-
T ss_pred cCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHH-HHHc-CCCCCCCCcChHHHHHHHH-
Confidence 33457788999999988889999999999999999998 887763211110000 0000 0011112223455555555
Q ss_pred HhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 562 ACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 562 ~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
+||+.||++|||+.|++++|+.+.++
T Consensus 240 --~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 240 --SCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp --HTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred --HHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 99999999999999999999998765
No 31
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.8e-43 Score=357.56 Aligned_cols=249 Identities=19% Similarity=0.273 Sum_probs=200.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
.+.|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35788899999999999999994 679999999986433 3456789999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 171 (297)
T 3fxz_A 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (297)
T ss_dssp CTTCBHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred CCCCCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--
Confidence 9999999999764 4899999999999999999999 78999999999999999999999999999987654322
Q ss_pred cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cCCCCHHHHHHHH
Q 035917 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CGKGYDEEILQFL 559 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~l~ 559 (611)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... .......+.. .....++++.+++
T Consensus 172 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li 250 (297)
T 3fxz_A 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY-LIATNGTPELQNPEKLSAIFRDFL 250 (297)
T ss_dssp CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHHCSCCCSCGGGSCHHHHHHH
T ss_pred ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhCCCCCCCCccccCHHHHHHH
Confidence 2234569999999999999999999999999999999999998874210000000 0000000000 0112334455555
Q ss_pred HHHhhcccCCCCCCCCHHHHHHH
Q 035917 560 KVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 560 ~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
. +||+.||++|||+.|+++|
T Consensus 251 ~---~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 251 N---RCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp H---HHSCSSTTTSCCHHHHTTC
T ss_pred H---HHccCChhHCcCHHHHhhC
Confidence 5 9999999999999999876
No 32
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=8.3e-43 Score=360.26 Aligned_cols=261 Identities=24% Similarity=0.360 Sum_probs=198.5
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccch---hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKL---GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
..++|...+.||+|+||.||+|+. +|+.||||++..... ..+++.+|++++++++||||+++++++...+..++||
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 345788889999999999999987 688999999965432 2357899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 399 KYMSSGTLYSLLQGNAT--ELDWPTRFRIGLGAARGLAWLHHGCQPP--FLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
||+++|+|.+++..... .+++..++.++.|++.||+||| +.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 190 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA 190 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCCC------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccc
Confidence 99999999999986542 4899999999999999999999 677 9999999999999999999999999998653
Q ss_pred CCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHH
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEE 554 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 554 (611)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ...............+.+
T Consensus 191 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 267 (309)
T 3p86_A 191 STF--LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVA-AVGFKCKRLEIPRNLNPQ 267 (309)
T ss_dssp -------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHH-HHHHSCCCCCCCTTSCHH
T ss_pred ccc--cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcCCCCCCCccCCHH
Confidence 321 11233469999999999999999999999999999999999998874311110000 000000000112234455
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCC
Q 035917 555 ILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGF 592 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (611)
+.++++ +||+.||++|||+.|+++.|+.+.+....
T Consensus 268 l~~li~---~~l~~dP~~Rps~~~ll~~L~~~~~~~~p 302 (309)
T 3p86_A 268 VAAIIE---GCWTNEPWKRPSFATIMDLLRPLIKSAVP 302 (309)
T ss_dssp HHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHC----
T ss_pred HHHHHH---HHccCChhhCcCHHHHHHHHHHHHHhCCC
Confidence 555555 99999999999999999999999876543
No 33
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.9e-42 Score=359.53 Aligned_cols=259 Identities=20% Similarity=0.247 Sum_probs=207.7
Q ss_pred cccHHHHHHhhhc----------CCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCC
Q 035917 313 KVKLADLMAASNS----------FCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPN 380 (611)
Q Consensus 313 ~~~~~~l~~~t~~----------f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~n 380 (611)
.++.+++..+++. |...+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|+.++++++|||
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n 103 (321)
T 2c30_A 24 VVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103 (321)
T ss_dssp -CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTT
T ss_pred cCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCC
Confidence 5788888888865 556678999999999999975 79999999996543 34567999999999999999
Q ss_pred ccceeeEEEeCCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC
Q 035917 381 LAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF 460 (611)
Q Consensus 381 Iv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~ 460 (611)
|+++++++...+..++||||+++|+|.+++... .+++..+..++.|++.||.||| +.+|+||||||+|||++.++
T Consensus 104 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~ 178 (321)
T 2c30_A 104 VVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV--RLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDG 178 (321)
T ss_dssp BCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTC
T ss_pred cceEEEEEEECCEEEEEEecCCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCC
Confidence 999999999999999999999999999998753 5899999999999999999999 78999999999999999999
Q ss_pred CeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhh
Q 035917 461 DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKE 540 (611)
Q Consensus 461 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~ 540 (611)
.+||+|||+++....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||......... .....
T Consensus 179 ~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~-~~~~~ 255 (321)
T 2c30_A 179 RVKLSDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM-KRLRD 255 (321)
T ss_dssp CEEECCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH-HHHHH
T ss_pred cEEEeeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHhc
Confidence 999999999987643321 223456999999999999989999999999999999999999887421000000 00000
Q ss_pred hhchhhc-CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 541 AIDKALC-GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 541 ~~~~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
...+.+. ....++++.+++. +||+.||++|||+.|++++
T Consensus 256 ~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 256 SPPPKLKNSHKVSPVLRDFLE---RMLVRDPQERATAQELLDH 295 (321)
T ss_dssp SSCCCCTTGGGSCHHHHHHHH---HHSCSSTTTSCCHHHHHTS
T ss_pred CCCCCcCccccCCHHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 0011110 1122345555555 9999999999999999986
No 34
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=5.6e-43 Score=355.95 Aligned_cols=258 Identities=16% Similarity=0.267 Sum_probs=207.5
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccC
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMS 402 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~ 402 (611)
.++|...+.||+|+||.||+|...++..||||+++......+++.+|++++.+++||||+++++++.+++..++||||++
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 102 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMA 102 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCT
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccC
Confidence 34677789999999999999999888899999998776677889999999999999999999999999999999999999
Q ss_pred CCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCccc
Q 035917 403 SGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV 482 (611)
Q Consensus 403 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 482 (611)
+|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~ 178 (283)
T 3gen_A 103 NGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSS 178 (283)
T ss_dssp TCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHST
T ss_pred CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccc-cccc
Confidence 99999999865456999999999999999999999 7899999999999999999999999999998764322 1112
Q ss_pred cCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHHHH
Q 035917 483 NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKV 561 (611)
Q Consensus 483 ~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l 561 (611)
....+|+.|+|||.+.+..++.++||||||+++|||++ |+.||.......... ....... .......++.+.+++.
T Consensus 179 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~l~~li~- 255 (283)
T 3gen_A 179 VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE-HIAQGLR-LYRPHLASEKVYTIMY- 255 (283)
T ss_dssp TSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH-HHHTTCC-CCCCTTCCHHHHHHHH-
T ss_pred cCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHH-HHhcccC-CCCCCcCCHHHHHHHH-
Confidence 23357889999999988889999999999999999998 888864321110000 0000000 1112223445555554
Q ss_pred HhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 562 ACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 562 ~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
+||+.||++|||+.|++++|+++.++
T Consensus 256 --~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 256 --SCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp --HTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HHccCChhHCcCHHHHHHHHHHHhhc
Confidence 99999999999999999999998865
No 35
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.7e-43 Score=370.74 Aligned_cols=267 Identities=18% Similarity=0.237 Sum_probs=210.2
Q ss_pred ccHHHHHHhhhcCCCCCeeeecCCceEEEEEe------CCCCEEEEEeccccc--hhHHHHHHHHHHHhcc-CCCCccce
Q 035917 314 VKLADLMAASNSFCSENVIISTRTGTTYKAML------PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQL-RHPNLAPL 384 (611)
Q Consensus 314 ~~~~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l-~H~nIv~l 384 (611)
+...+.....++|...+.||+|+||.||+|++ .+++.||||+++... ...+.+.+|++++.++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 34445555677899999999999999999973 346899999997543 2346799999999999 79999999
Q ss_pred eeEEEeCCe-eEEEEeccCCCChHHhhhcCCC------------------------------------------------
Q 035917 385 LGYCVVEEE-KLLIYKYMSSGTLYSLLQGNAT------------------------------------------------ 415 (611)
Q Consensus 385 ~g~~~~~~~-~~lv~ey~~~gsL~~~l~~~~~------------------------------------------------ 415 (611)
++++...+. .++||||+++|+|.+++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 8999999999999999975421
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 416 -----------------ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 416 -----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
.+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 1889999999999999999999 78999999999999999999999999999987654433
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchh---hcCCCCHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKA---LCGKGYDEE 554 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~ 554 (611)
........||+.|+|||++.+..++.++|||||||++|||++ |..||...... ......+... ......+++
T Consensus 249 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 324 (359)
T 3vhe_A 249 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRLKEGTRMRAPDYTTPE 324 (359)
T ss_dssp CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS----HHHHHHHHHTCCCCCCTTCCHH
T ss_pred chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh----HHHHHHHHcCCCCCCCCCCCHH
Confidence 333344568999999999988899999999999999999998 88887421000 0000111110 111223444
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 555 ILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
+.+ ++.+||+.||++|||+.|++++|+++.+..
T Consensus 325 l~~---li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 325 MYQ---TMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHH---HHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 445 455999999999999999999999998764
No 36
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.6e-43 Score=363.76 Aligned_cols=257 Identities=19% Similarity=0.301 Sum_probs=198.2
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCE----EEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSV----LAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~----vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
++|...+.||+|+||.||+|+.. +++. ||+|.++... ...+++.+|+.++++++||||++++++|..++ .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 46777899999999999999953 4443 6888885432 34578999999999999999999999998754 789
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
|+||+++|+|.+++......+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~ 170 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTT
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCC
Confidence 99999999999999876667999999999999999999999 789999999999999999999999999999987544
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEI 555 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 555 (611)
..........||+.|+|||++.+..++.++|||||||++|||++ |+.||..... ......+.............
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 245 (327)
T 3poz_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISSILEKGERLPQPPICT 245 (327)
T ss_dssp CC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCCTTBC
T ss_pred cccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----HHHHHHHHcCCCCCCCccCC
Confidence 43333334457889999999999999999999999999999999 8888743110 11111111111111111222
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 556 LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
..+.+++.+||+.||++||++.|++++|+.+.+.
T Consensus 246 ~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 3455566699999999999999999999998754
No 37
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.6e-42 Score=357.66 Aligned_cols=255 Identities=25% Similarity=0.339 Sum_probs=198.4
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
++|...+.||+|+||.||+|+.. ..+|+|.++... ...+.+.+|++++++++||||+++++++. .+..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 46778899999999999999864 368999886532 23467999999999999999999999875 5568999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.........
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~ 189 (307)
T 3lb7_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQ 189 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceecccccccc
Confidence 9999999999866667999999999999999999999 7899999999999999999999999999998654322222
Q ss_pred cccCCCcccccccccccC---CCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhh--cCCC
Q 035917 481 FVNGDLGEFGYIAPEYSS---TMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKAL--CGKG 550 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l--~~~~ 550 (611)
......||+.|+|||++. +..++.++|||||||++|||++|+.||... ........ ...+.+ ....
T Consensus 190 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 265 (307)
T 3lb7_A 190 QVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG----YASPDLSKLYKN 265 (307)
T ss_dssp ----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHT----CCCCCSTTSCSS
T ss_pred cccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcC----CCCcchhhhhcC
Confidence 333456999999999875 567899999999999999999999887421 11111000 001111 1122
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
.++++.+++. +||+.||++||++.||+++|+.+....+
T Consensus 266 ~~~~l~~li~---~~l~~~p~~RPs~~~il~~l~~l~~~~p 303 (307)
T 3lb7_A 266 CPKAMKRLVA---DCVKKVKEERPLFPQILSSIELLQHSLP 303 (307)
T ss_dssp SCHHHHHHHH---HHSCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred CcHHHHHHHH---HHhhCChhhCcCHHHHHHHHHHHHhhcc
Confidence 3445555554 9999999999999999999999987754
No 38
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-42 Score=367.63 Aligned_cols=260 Identities=22% Similarity=0.286 Sum_probs=208.9
Q ss_pred hhcCCCCCeeeecCCceEEEEEe--------CCCCEEEEEeccccc--hhHHHHHHHHHHHhcc-CCCCccceeeEEEeC
Q 035917 323 SNSFCSENVIISTRTGTTYKAML--------PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVE 391 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~--------~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~ 391 (611)
.++|...+.||+|+||.||+|+. .++..||||+++... ...+++.+|+++++++ +||||+++++++..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 35777889999999999999985 234689999997543 2346799999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe
Q 035917 392 EEKLLIYKYMSSGTLYSLLQGNA---------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456 (611)
Q Consensus 392 ~~~~lv~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 456 (611)
+..++||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEE
Confidence 99999999999999999997543 25899999999999999999999 7899999999999999
Q ss_pred CCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHH----HHH
Q 035917 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDW----VNQ 531 (611)
Q Consensus 457 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~----~~~ 531 (611)
+.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||... ...
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~ 304 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 304 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 9999999999999987654332233334468899999999999899999999999999999998 87776321 111
Q ss_pred HhhcCChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCCC
Q 035917 532 LSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFSE 594 (611)
Q Consensus 532 ~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (611)
...... .. ......++++.+++ .+||+.||++|||+.||+++|+++.......+
T Consensus 305 ~~~~~~-----~~-~~~~~~~~~l~~li---~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~ 358 (382)
T 3tt0_A 305 LLKEGH-----RM-DKPSNCTNELYMMM---RDCWHAVPSQRPTFKQLVEDLDRIVALTSNQE 358 (382)
T ss_dssp HHHTTC-----CC-CCCSSCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC
T ss_pred HHHcCC-----CC-CCCccCCHHHHHHH---HHHcCCChhhCcCHHHHHHHHHHHHHHHhcCC
Confidence 111100 00 01122344555544 49999999999999999999999988765444
No 39
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=8.9e-42 Score=349.83 Aligned_cols=259 Identities=26% Similarity=0.348 Sum_probs=195.3
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhc--cCCCCccceeeEEEeC----CeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQ--LRHPNLAPLLGYCVVE----EEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~--l~H~nIv~l~g~~~~~----~~~~l 396 (611)
.++|...+.||+|+||.||+|+. +++.||||++.... .+.+.+|.+++.. ++||||+++++++... ...++
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~--~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD--EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc--chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 45788889999999999999998 78999999996543 3445556666555 8999999999997653 45789
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeecCCCCCeEEeCCCCCeEEeeccccc
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGC-----QPPFLHQNICSNVILVDEDFDARIMDFGLAK 471 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlkp~NILld~~~~~kl~DFGla~ 471 (611)
||||+++|+|.+++... .+++..++.++.|++.||+|||... +.+|+||||||+|||++.++.+||+|||+++
T Consensus 84 v~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~ 161 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLT--TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAV 161 (301)
T ss_dssp EECCCTTCBHHHHHTTC--CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ehhhccCCCHHHHHhhc--ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCee
Confidence 99999999999999643 5899999999999999999999321 5789999999999999999999999999998
Q ss_pred ccCCCCCCc--cccCCCcccccccccccCCC------CCCcccchHHHHHHHHHHhCC----------CCCHHHHHHHHh
Q 035917 472 LMTSSDESS--FVNGDLGEFGYIAPEYSSTM------VASLKGDVYGIGVVLLELAGF----------KGNLVDWVNQLS 533 (611)
Q Consensus 472 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~t~ksDV~SfGvvl~ell~~----------~~~~~~~~~~~~ 533 (611)
......... ......||+.|+|||++.+. .++.++|||||||++|||++| +.||.+......
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~ 241 (301)
T 3q4u_A 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDP 241 (301)
T ss_dssp EEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred ecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCc
Confidence 765433211 12234699999999998776 455799999999999999998 666632110000
Q ss_pred hcCChhhhh-----chhhcCC-CCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHc
Q 035917 534 SSGRSKEAI-----DKALCGK-GYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSI 586 (611)
Q Consensus 534 ~~~~~~~~~-----~~~l~~~-~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 586 (611)
......... .+.+... ........+.+++.+||+.||++|||+.||++.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 242 SFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred chhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 000000000 0001000 1122445566677799999999999999999999976
No 40
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5.5e-42 Score=362.21 Aligned_cols=266 Identities=14% Similarity=0.149 Sum_probs=209.7
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeCC------CCEEEEEeccccchh------------HHHHHHHHHHHhccCCCCccc
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLPD------GSVLAVKRLNTCKLG------------EKKFRNEMNRLGQLRHPNLAP 383 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~~------g~~vAvK~~~~~~~~------------~~~~~~Ev~~l~~l~H~nIv~ 383 (611)
..++|...+.||+|+||.||+|...+ ++.||||++...... ...+.+|+..+..++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 34578888999999999999999754 478999998654311 123556777888889999999
Q ss_pred eeeEEEeC----CeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC--
Q 035917 384 LLGYCVVE----EEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD-- 457 (611)
Q Consensus 384 l~g~~~~~----~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld-- 457 (611)
+++++... ...++||||+ +|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecC
Confidence 99999764 4579999999 99999999876567999999999999999999999 78999999999999998
Q ss_pred CCCCeEEeecccccccCCCCCC-----ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHH---
Q 035917 458 EDFDARIMDFGLAKLMTSSDES-----SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWV--- 529 (611)
Q Consensus 458 ~~~~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~--- 529 (611)
.++.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 8899999999999876432211 11123459999999999999999999999999999999999999885311
Q ss_pred ---H--HHhhcCChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCCC
Q 035917 530 ---N--QLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFSE 594 (611)
Q Consensus 530 ---~--~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (611)
. .........+.+++.+.....++++.++++ .||+.||++||++.+|++.|+++.+..+...
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~cl~~~p~~RP~~~~l~~~l~~~~~~~~~~~ 335 (364)
T 3op5_A 269 KYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYME---TVKLLDYTEKPLYENLRDILLQGLKAIGSKD 335 (364)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHH---HHhcCCCCCCCCHHHHHHHHHHHHHHcCCCc
Confidence 0 000111233333443333445556666555 9999999999999999999999999876654
No 41
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-42 Score=362.36 Aligned_cols=261 Identities=23% Similarity=0.328 Sum_probs=206.4
Q ss_pred HhhhcCCCCCeeeecCCceEEEEEeC------CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCC
Q 035917 321 AASNSFCSENVIISTRTGTTYKAMLP------DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE 392 (611)
Q Consensus 321 ~~t~~f~~~~~ig~G~~g~Vy~~~~~------~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~ 392 (611)
...++|...+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+.++++++||||+++++++..++
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 123 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK 123 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC
Confidence 34578888999999999999999963 35899999997543 23467999999999999999999999999999
Q ss_pred eeEEEEeccCCCChHHhhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCC
Q 035917 393 EKLLIYKYMSSGTLYSLLQGNA-----------------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNI 449 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 449 (611)
..++||||+++|+|.+++.... ..+++..++.++.|+++||.||| +.+|+||||
T Consensus 124 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dl 200 (343)
T 1luf_A 124 PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDL 200 (343)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCC
T ss_pred ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCC
Confidence 9999999999999999997532 46899999999999999999999 789999999
Q ss_pred CCCeEEeCCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHH
Q 035917 450 CSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDW 528 (611)
Q Consensus 450 kp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~ 528 (611)
||+|||++.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |..||...
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~ 280 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGM 280 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred CcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCC
Confidence 99999999999999999999987643322222233468999999999988889999999999999999998 88776421
Q ss_pred HHHHhhcCChhhhhchh--hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 529 VNQLSSSGRSKEAIDKA--LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 529 ~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
..... ...+.+.. ......+.++.++ +.+||+.||++||++.+++++|+++.+...
T Consensus 281 ~~~~~----~~~~~~~~~~~~~~~~~~~l~~l---i~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 281 AHEEV----IYYVRDGNILACPENCPLELYNL---MRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp CHHHH----HHHHHTTCCCCCCTTCCHHHHHH---HHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred ChHHH----HHHHhCCCcCCCCCCCCHHHHHH---HHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 11000 00000000 1112334455554 459999999999999999999999987653
No 42
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=8.7e-43 Score=356.87 Aligned_cols=261 Identities=21% Similarity=0.316 Sum_probs=200.1
Q ss_pred hcCCCCCeeeecCCceEEEEEe-----CCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeC--CeeE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-----PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE--EEKL 395 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~--~~~~ 395 (611)
++|...+.||+|+||.||+|++ .+++.||||++.... ...+.+.+|++++++++||||+++++++... ...+
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 4677788999999999999984 368999999997643 3346799999999999999999999998653 4589
Q ss_pred EEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
+||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 999999999999999876556999999999999999999999 78999999999999999999999999999987644
Q ss_pred CCCC-ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHH---HhhcCC--------hhhhhc
Q 035917 476 SDES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQ---LSSSGR--------SKEAID 543 (611)
Q Consensus 476 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~---~~~~~~--------~~~~~~ 543 (611)
.... .......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ...... ..+.+.
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 246 (295)
T ss_dssp ---------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred CcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh
Confidence 3211 1222335788899999999889999999999999999999987664221111 111110 001111
Q ss_pred hhh---cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 544 KAL---CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 544 ~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
... .....++++.+ ++.+||+.||++|||+.|+++.|+++.+..
T Consensus 247 ~~~~~~~~~~~~~~l~~---li~~~l~~dp~~Rps~~el~~~L~~l~~~l 293 (295)
T 3ugc_A 247 NNGRLPRPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDNM 293 (295)
T ss_dssp TTCCCCCCTTCCHHHHH---HHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ccCcCCCCcCcCHHHHH---HHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence 111 11223444555 455999999999999999999999998764
No 43
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.7e-42 Score=355.38 Aligned_cols=247 Identities=17% Similarity=0.223 Sum_probs=202.6
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEecc
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~ 401 (611)
.++|...+.||+|+||.||+|+.. +++.||+|.++......+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 83 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFI 83 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeC
Confidence 356788899999999999999964 6889999999876666678999999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC--CCCeEEeecccccccCCCCCC
Q 035917 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE--DFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 402 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~--~~~~kl~DFGla~~~~~~~~~ 479 (611)
++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||+++.......
T Consensus 84 ~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~- 159 (321)
T 1tki_A 84 SGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN- 159 (321)
T ss_dssp CCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE-
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc-
Confidence 999999999866557999999999999999999999 789999999999999987 78999999999987654322
Q ss_pred ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCCCCHHH
Q 035917 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGKGYDEE 554 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~ 554 (611)
.....||+.|+|||++.+..++.++|||||||++|||++|..||... .......... .+... ....+++
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~-~~~~s~~ 233 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT---FDEEA-FKEISIE 233 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC---CCHHH-HTTSCHH
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCC---CChhh-hccCCHH
Confidence 22235899999999999888999999999999999999999887321 1111110000 00000 0123344
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 555 ILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+.+++. +||+.||++|||+.|+++|
T Consensus 234 ~~~li~---~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 234 AMDFVD---RLLVKERKSRMTASEALQH 258 (321)
T ss_dssp HHHHHH---TTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHH---HHcCCChhHCcCHHHHhcC
Confidence 555554 9999999999999999987
No 44
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.1e-42 Score=378.67 Aligned_cols=259 Identities=20% Similarity=0.328 Sum_probs=207.7
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEecc
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~ 401 (611)
..++|...+.||+|+||.||+|...++..||||+++......++|.+|+.+|++++|||||++++++. .+..++|||||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSBCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 34577788999999999999999988999999999876666788999999999999999999999986 66789999999
Q ss_pred CCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 402 SSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 402 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~~ 340 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YT 340 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-HH
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-ee
Confidence 9999999997543 26899999999999999999999 7899999999999999999999999999998764321 11
Q ss_pred cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHH
Q 035917 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFL 559 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 559 (611)
......+|..|+|||.+....++.++|||||||++|||++ |+.||.......... ........ ......++++.+
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~-~i~~~~~~-~~~~~~~~~l~~-- 416 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR-ALERGYRM-PRPENCPEELYN-- 416 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH-HHHHTCCC-CCCTTSCHHHHH--
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-HHHcCCCC-CCCCCCCHHHHH--
Confidence 1223347889999999988899999999999999999998 888874311110000 00000000 011223444444
Q ss_pred HHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 560 KVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 560 ~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
++.+||+.||++|||+.+|++.|+++....
T Consensus 417 -li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 417 -IMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp -HHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred -HHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 555999999999999999999999887654
No 45
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.3e-41 Score=353.28 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=197.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEecccc--chhHHHHHHHHHHHhccCCCCccceeeEEEeCC-------
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTC--KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE------- 392 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~--~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~------- 392 (611)
.++|...+.||+|+||.||+|+.. +|+.||||+++.. ....+.+.+|++++++++||||+++++++.+.+
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 457888899999999999999975 7999999998643 234578999999999999999999999986643
Q ss_pred --------------------------------------------------eeEEEEeccCCCChHHhhhcCCC--CCCHH
Q 035917 393 --------------------------------------------------EKLLIYKYMSSGTLYSLLQGNAT--ELDWP 420 (611)
Q Consensus 393 --------------------------------------------------~~~lv~ey~~~gsL~~~l~~~~~--~l~~~ 420 (611)
..++|||||++|+|.+++..... ..++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 27899999999999999986542 56788
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC----------ccccCCCcccc
Q 035917 421 TRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES----------SFVNGDLGEFG 490 (611)
Q Consensus 421 ~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~----------~~~~~~~gt~~ 490 (611)
.++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++........ .......||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 89999999999999999 789999999999999999999999999999877543211 12234569999
Q ss_pred cccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCC
Q 035917 491 YIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRP 570 (611)
Q Consensus 491 y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP 570 (611)
|+|||++.+..++.++|||||||++|||+++..++.+......... .. ............+.+++.+||+.||
T Consensus 242 y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~li~~~l~~~p 314 (332)
T 3qd2_B 242 YMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVR------NL-KFPLLFTQKYPQEHMMVQDMLSPSP 314 (332)
T ss_dssp GSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHH------TT-CCCHHHHHHCHHHHHHHHHHHCSSG
T ss_pred ccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhh------cc-CCCcccccCChhHHHHHHHHccCCC
Confidence 9999999988999999999999999999999887654332211100 00 0000011222344556669999999
Q ss_pred CCCCCHHHHHHH
Q 035917 571 KDRWSMYQVYQS 582 (611)
Q Consensus 571 ~~RPs~~evl~~ 582 (611)
++|||+.|+++|
T Consensus 315 ~~Rps~~~~l~~ 326 (332)
T 3qd2_B 315 TERPEATDIIEN 326 (332)
T ss_dssp GGSCCHHHHHHS
T ss_pred CcCCCHHHHhhc
Confidence 999999999875
No 46
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-41 Score=355.08 Aligned_cols=263 Identities=24% Similarity=0.322 Sum_probs=198.5
Q ss_pred HhhhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhc--cCCCCccceeeEEEeC----Cee
Q 035917 321 AASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQ--LRHPNLAPLLGYCVVE----EEK 394 (611)
Q Consensus 321 ~~t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~--l~H~nIv~l~g~~~~~----~~~ 394 (611)
...++|...+.||+|+||.||+|+.. ++.||||++.... ...+.+|.+++.. ++||||+++++++... ...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE--EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc--cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 44578999999999999999999985 8999999986543 3344455555554 4899999999999887 678
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC--------CeeecCCCCCeEEeCCCCCeEEee
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQP--------PFLHQNICSNVILVDEDFDARIMD 466 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~--------~ivHrDlkp~NILld~~~~~kl~D 466 (611)
++||||+++|+|.+++... .+++..++.++.|++.||+||| .. +|+||||||+|||++.++.+||+|
T Consensus 111 ~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~D 185 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKST--TLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIAD 185 (337)
T ss_dssp EEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EEEEeccCCCcHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHEEECCCCCEEEEe
Confidence 9999999999999999754 5899999999999999999999 56 999999999999999999999999
Q ss_pred cccccccCCCCCCc--cccCCCcccccccccccCCCCCCcc------cchHHHHHHHHHHhCC----------CCCHHHH
Q 035917 467 FGLAKLMTSSDESS--FVNGDLGEFGYIAPEYSSTMVASLK------GDVYGIGVVLLELAGF----------KGNLVDW 528 (611)
Q Consensus 467 FGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~k------sDV~SfGvvl~ell~~----------~~~~~~~ 528 (611)
||+++......... ......||+.|+|||++.+..++.+ +|||||||++|||++| ..|+...
T Consensus 186 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~ 265 (337)
T 3mdy_A 186 LGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDL 265 (337)
T ss_dssp CTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhh
Confidence 99998764332211 1123469999999999887766655 9999999999999998 4454321
Q ss_pred HHHHhhcCChhhhhc-hhhcCCC-----CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 529 VNQLSSSGRSKEAID-KALCGKG-----YDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 529 ~~~~~~~~~~~~~~~-~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
...........+.+. ....... ..+....+.+++.+||+.||++|||+.||+++|+.+.+...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~ 334 (337)
T 3mdy_A 266 VPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQD 334 (337)
T ss_dssp SCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTT
T ss_pred cCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcc
Confidence 100000000000000 0001111 11344556667779999999999999999999999998764
No 47
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=4e-42 Score=354.57 Aligned_cols=256 Identities=20% Similarity=0.293 Sum_probs=205.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEe------CCCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCee
Q 035917 323 SNSFCSENVIISTRTGTTYKAML------PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~ 394 (611)
.++|...+.||+|+||.||+|.. .+++.||||+++... ...+++.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45677889999999999999985 345899999997543 2346789999999999999999999999999999
Q ss_pred EEEEeccCCCChHHhhhcCC-----------------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCC
Q 035917 395 LLIYKYMSSGTLYSLLQGNA-----------------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICS 451 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~-----------------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp 451 (611)
++||||+++|+|.+++.... ..+++..++.++.|+++||.||| +.+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 99999999999999997532 23889999999999999999999 78999999999
Q ss_pred CeEEeCCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHH
Q 035917 452 NVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVN 530 (611)
Q Consensus 452 ~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~ 530 (611)
+||+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654332222233457889999999988889999999999999999998 8877643110
Q ss_pred HHhhcCChhhhhchhh---cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 531 QLSSSGRSKEAIDKAL---CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 531 ~~~~~~~~~~~~~~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
. ...+.+.... .....++++.+++ .+||+.||++||++.|++++|+++.++
T Consensus 259 ~-----~~~~~~~~~~~~~~~~~~~~~~~~li---~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 E-----RLFNLLKTGHRMERPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp G-----GHHHHHHTTCCCCCCTTCCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H-----HHHHHhhcCCcCCCCccCCHHHHHHH---HHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 0 0111111111 1122344555554 499999999999999999999998765
No 48
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4e-42 Score=346.23 Aligned_cols=257 Identities=21% Similarity=0.304 Sum_probs=209.0
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccCC
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~~ 403 (611)
++|...+.||+|+||.||+|...+++.||+|+++......+++.+|++++++++||||+++++++..++..++||||+++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 46777889999999999999998899999999987666678899999999999999999999999999999999999999
Q ss_pred CChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCcccc
Q 035917 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVN 483 (611)
Q Consensus 404 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 483 (611)
|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 88 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~ 163 (267)
T 3t9t_A 88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSST 163 (267)
T ss_dssp CBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTT
T ss_pred CcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc-ccccc
Confidence 9999999876567899999999999999999999 7899999999999999999999999999998764321 11122
Q ss_pred CCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHHHHH
Q 035917 484 GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVA 562 (611)
Q Consensus 484 ~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~ 562 (611)
...++..|+|||.+.+..++.++||||||+++|||++ |+.||.......... ....... .......+.++.+++.
T Consensus 164 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~-~i~~~~~-~~~~~~~~~~l~~li~-- 239 (267)
T 3t9t_A 164 GTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-DISTGFR-LYKPRLASTHVYQIMN-- 239 (267)
T ss_dssp STTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-HHHTTCC-CCCCTTSCHHHHHHHH--
T ss_pred cccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHH-HHhcCCc-CCCCccCcHHHHHHHH--
Confidence 3457889999999988889999999999999999999 777764211000000 0000000 0112223445555555
Q ss_pred hhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 563 CNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 563 ~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
+||+.||++||++.|++++|+++.++
T Consensus 240 -~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 240 -HCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp -HHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -HHccCChhhCcCHHHHHHHHHHHHhc
Confidence 99999999999999999999998864
No 49
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.8e-43 Score=369.70 Aligned_cols=257 Identities=18% Similarity=0.226 Sum_probs=202.9
Q ss_pred hcCCCCCeeeecCCceEEEEEeC------CCCEEEEEecccc--chhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP------DGSVLAVKRLNTC--KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~------~g~~vAvK~~~~~--~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~ 395 (611)
++|...+.||+|+||.||+|++. +++.||||+++.. .....++.+|+.++++++||||+++++++...+..+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56778899999999999999953 4678999999653 234467899999999999999999999999999999
Q ss_pred EEEeccCCCChHHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC---CeEEee
Q 035917 396 LIYKYMSSGTLYSLLQGNA------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF---DARIMD 466 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~---~~kl~D 466 (611)
+||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 9999999999999997432 35899999999999999999999 78999999999999999544 599999
Q ss_pred cccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchh
Q 035917 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKA 545 (611)
Q Consensus 467 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (611)
||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||....... ..+.+...
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~-----~~~~i~~~ 302 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE-----VLEFVTSG 302 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHH-----HHHHHHTT
T ss_pred CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcC
Confidence 999986533222222223357899999999988899999999999999999998 877763211000 00001000
Q ss_pred ---hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 546 ---LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 546 ---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
......+.++.+ ++.+||+.||++||++.||+++|+.+.+...
T Consensus 303 ~~~~~~~~~~~~l~~---li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 303 GRMDPPKNCPGPVYR---IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp CCCCCCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred CCCCCCccCCHHHHH---HHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 011223344444 5559999999999999999999999887653
No 50
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.9e-42 Score=380.63 Aligned_cols=255 Identities=24% Similarity=0.368 Sum_probs=208.7
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCC-CCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEecc
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPD-GSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~ 401 (611)
.++|...+.||+|+||.||+|++.. +..||||.++......++|.+|+.+|++++|||||+++++|...+..++|||||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~ 298 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 298 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEcc
Confidence 3467778999999999999999764 889999999876666788999999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 402 SSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 402 ~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
++|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 299 ~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~ 374 (495)
T 1opk_A 299 TYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YT 374 (495)
T ss_dssp TTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-EE
T ss_pred CCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-ee
Confidence 9999999997643 46899999999999999999999 7899999999999999999999999999998764332 12
Q ss_pred cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhc---CCCCHHHHH
Q 035917 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALC---GKGYDEEIL 556 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~ 556 (611)
......+++.|+|||.+.+..++.++|||||||++|||++ |..||..... ....+.+..... ....++++.
T Consensus 375 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~ 449 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDYRMERPEGCPEKVY 449 (495)
T ss_dssp CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHTTCCCCCCTTCCHHHH
T ss_pred ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHHH
Confidence 2233457889999999988889999999999999999998 7777643110 011111111111 122334444
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
+ ++.+||+.||++|||+.+|++.|+.+.+.
T Consensus 450 ~---li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 450 E---LMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp H---HHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred H---HHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 4 55599999999999999999999987644
No 51
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=1.1e-41 Score=354.87 Aligned_cols=246 Identities=19% Similarity=0.228 Sum_probs=200.2
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ...+++.+|++++++++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35788889999999999999996 679999999996543 23467889999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 94 e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~- 168 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH-GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG- 168 (328)
T ss_dssp CCCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC-
T ss_pred ECCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC-
Confidence 999999999998654 35899999999999999999999 7899999999999999999999999999998764332
Q ss_pred CccccCCCcccccccccccCCCCCC-cccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVAS-LKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEIL 556 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t-~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~ 556 (611)
.....+||+.|+|||++.+..++ .++|||||||++|||++|+.||........ ...+.... ..+...+.++.
T Consensus 169 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~----~~~i~~~~~~~p~~~s~~~~ 242 (328)
T 3fe3_A 169 --KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKEL----RERVLRGKYRIPFYMSTDCE 242 (328)
T ss_dssp --GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCTTSCHHHH
T ss_pred --ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHH----HHHHHhCCCCCCCCCCHHHH
Confidence 23445799999999999887765 789999999999999999988732100000 00000000 01123345555
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++++ +||+.||++|||+.|+++|
T Consensus 243 ~li~---~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 243 NLLK---RFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp HHHH---HHCCSSTTTSCCHHHHTTC
T ss_pred HHHH---HHCCCChhHCcCHHHHhcC
Confidence 5555 9999999999999999987
No 52
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.7e-42 Score=353.93 Aligned_cols=258 Identities=22% Similarity=0.321 Sum_probs=207.6
Q ss_pred hhcCCCCCeeeecCCceEEEEEe------CCCCEEEEEeccccc--hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCe
Q 035917 323 SNSFCSENVIISTRTGTTYKAML------PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEE 393 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~ 393 (611)
.++|...+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+.++.++ +||||+++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35677889999999999999984 357899999997543 2346799999999999 89999999999999999
Q ss_pred eEEEEeccCCCChHHhhhcCCC-----------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe
Q 035917 394 KLLIYKYMSSGTLYSLLQGNAT-----------------ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456 (611)
Q Consensus 394 ~~lv~ey~~~gsL~~~l~~~~~-----------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 456 (611)
.++||||+++|+|.+++..... .+++..++.++.|++.||.||| +.+|+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 9999999999999999975432 4899999999999999999999 7899999999999999
Q ss_pred CCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhc
Q 035917 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSS 535 (611)
Q Consensus 457 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~ 535 (611)
+.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |..||..... .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~ 254 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV----D 254 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS----S
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc----h
Confidence 9999999999999987754433333334457889999999988899999999999999999998 7777632100 0
Q ss_pred CChhhhhchh---hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 536 GRSKEAIDKA---LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 536 ~~~~~~~~~~---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
......+... ......++++.+++. +||+.||++|||+.|++++|+++..+.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 255 SKFYKMIKEGFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp HHHHHHHHHTCCCCCCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred hHHHHHhccCCCCCCcccCCHHHHHHHH---HHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 0001111111 112233445555555 999999999999999999999988764
No 53
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.2e-41 Score=354.57 Aligned_cols=256 Identities=11% Similarity=0.085 Sum_probs=207.3
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEEEEecc
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLLIYKYM 401 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ey~ 401 (611)
++|...+.||+|+||.||+|+. .+|+.||||++.... ..+++.+|+++++++ +||||+++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 5678889999999999999995 679999999986432 234688999999999 8999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC-----eEEeecccccccCCC
Q 035917 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD-----ARIMDFGLAKLMTSS 476 (611)
Q Consensus 402 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~-----~kl~DFGla~~~~~~ 476 (611)
+|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+++.+...
T Consensus 88 -~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 88 -GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 89999999865557999999999999999999999 789999999999999998887 999999999876443
Q ss_pred CCCc-----cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhh---------
Q 035917 477 DESS-----FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAI--------- 542 (611)
Q Consensus 477 ~~~~-----~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~--------- 542 (611)
.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.... .....+.+
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i~~~~~~ 238 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLK-----ADTLKERYQKIGDTKRA 238 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CSSHHHHHHHHHHHHHH
T ss_pred CCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccc-----cccHHHHHHHHHhhhcc
Confidence 2111 1234579999999999999999999999999999999999998874310 00111100
Q ss_pred -chhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 543 -DKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 543 -~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
.........+ .+.+++.+||+.||.+||++.+|++.|+++.++.+..
T Consensus 239 ~~~~~~~~~~p----~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~ 286 (330)
T 2izr_A 239 TPIEVLCENFP----EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYM 286 (330)
T ss_dssp SCHHHHTTTCH----HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred CCHHHHhccCh----HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCC
Confidence 0011111223 4455555999999999999999999999999887654
No 54
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.7e-42 Score=359.27 Aligned_cols=259 Identities=21% Similarity=0.272 Sum_probs=203.7
Q ss_pred hhhcCCCCCeeeecCCceEEEEEe------CCCCEEEEEeccccc--hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCC
Q 035917 322 ASNSFCSENVIISTRTGTTYKAML------PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEE 392 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~ 392 (611)
..++|...+.||+|+||.||+|+. .++..||||+++... ...+.+.+|+.++.++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 346788889999999999999995 246689999997532 2336799999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChHHhhhcCCC----------------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 035917 393 EKLLIYKYMSSGTLYSLLQGNAT----------------------ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNIC 450 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~~~~----------------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk 450 (611)
..++||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 99999999999999999975432 3799999999999999999999 7899999999
Q ss_pred CCeEEeCCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHH
Q 035917 451 SNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWV 529 (611)
Q Consensus 451 p~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~ 529 (611)
|+|||++.++.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987654433333333457889999999988889999999999999999998 887763210
Q ss_pred HHHhhcCChhhhhchhh---cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 530 NQLSSSGRSKEAIDKAL---CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 530 ~~~~~~~~~~~~~~~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
. .......+.... .....++++.+++. +||+.||++|||+.|++++|+.+....
T Consensus 280 ~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 280 V----DANFYKLIQNGFKMDQPFYATEEIYIIMQ---SCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp C----SHHHHHHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred c----HHHHHHHHhcCCCCCCCCCCCHHHHHHHH---HHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 0 000011111111 11223445555555 999999999999999999999987654
No 55
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.9e-42 Score=359.87 Aligned_cols=249 Identities=20% Similarity=0.239 Sum_probs=197.1
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
++|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.+++.++||||+++++++.+++..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 56788899999999999999965 79999999986433 2236689999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.......
T Consensus 87 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 162 (323)
T 3tki_A 87 CSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (323)
T ss_dssp CTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred CCCCcHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCccc
Confidence 9999999999754 35899999999999999999999 7899999999999999999999999999998764333223
Q ss_pred cccCCCcccccccccccCCCCC-CcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhc---CCCCHHHHH
Q 035917 481 FVNGDLGEFGYIAPEYSSTMVA-SLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALC---GKGYDEEIL 556 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~ 556 (611)
......||+.|+|||++.+..+ +.++|||||||++|||++|+.||....... ............ ....++++.
T Consensus 163 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 239 (323)
T 3tki_A 163 LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKEKKTYLNPWKKIDSAPL 239 (323)
T ss_dssp CBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS---HHHHHHHTTCTTSTTGGGSCHHHH
T ss_pred ccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHHhcccccCCccccCCHHHH
Confidence 3345579999999999877665 788999999999999999998873210000 000000000000 012234444
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+ ++.+||+.||++|||+.|++++
T Consensus 240 ~---li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 240 A---LLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp H---HHHHHSCSSTTTSCCHHHHTTC
T ss_pred H---HHHHHccCChhhCcCHHHHhhC
Confidence 4 4559999999999999999876
No 56
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.4e-41 Score=345.04 Aligned_cols=263 Identities=12% Similarity=0.088 Sum_probs=208.8
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEEEEecc
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLLIYKYM 401 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ey~ 401 (611)
++|...+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+.++.++ +|+|++++++++......++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 4677889999999999999995 679999999985432 334688999999999 7999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC-----eEEeecccccccCCC
Q 035917 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD-----ARIMDFGLAKLMTSS 476 (611)
Q Consensus 402 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~-----~kl~DFGla~~~~~~ 476 (611)
+++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++. +||+|||+++.....
T Consensus 89 -~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 89 -GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp -CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred -CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 99999999866557999999999999999999999 889999999999999987766 999999999876543
Q ss_pred CCC-----ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHH----HHHhhcC-Chhhhhchhh
Q 035917 477 DES-----SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWV----NQLSSSG-RSKEAIDKAL 546 (611)
Q Consensus 477 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~----~~~~~~~-~~~~~~~~~l 546 (611)
... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ....... ..........
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRE 244 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHH
T ss_pred cccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHH
Confidence 221 12234569999999999999899999999999999999999998874310 0000000 0000000000
Q ss_pred cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCCC
Q 035917 547 CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFSE 594 (611)
Q Consensus 547 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (611)
.....++++.+++. +||+.||++||++++|++.|+++.++.+..+
T Consensus 245 ~~~~~~~~l~~li~---~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~ 289 (298)
T 1csn_A 245 LCAGFPEEFYKYMH---YARNLAFDATPDYDYLQGLFSKVLERLNTTE 289 (298)
T ss_dssp HTTTSCHHHHHHHH---HHHHCCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred HHhhCcHHHHHHHH---HHhcCCcccCCCHHHHHHHHHHHHHhcCCCC
Confidence 11233445555555 9999999999999999999999998876544
No 57
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.4e-41 Score=369.40 Aligned_cols=249 Identities=24% Similarity=0.321 Sum_probs=201.4
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCC-eeEEEEecc
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE-EKLLIYKYM 401 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~-~~~lv~ey~ 401 (611)
.++|...+.||+|+||.||+|... |+.||||+++... ..++|.+|+.+|++++||||+++++++...+ ..++|||||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT-TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch-HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 356777899999999999999984 7899999997643 4567999999999999999999999988765 689999999
Q ss_pred CCCChHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 402 SSGTLYSLLQGNAT-ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 402 ~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
++|+|.+++..... .+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 270 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 343 (450)
T 1k9a_A 270 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 343 (450)
T ss_dssp TTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc---
Confidence 99999999976543 4799999999999999999999 7899999999999999999999999999998643211
Q ss_pred cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhh---cCCCCHHHHH
Q 035917 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKAL---CGKGYDEEIL 556 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~ 556 (611)
....+++.|+|||.+.+..++.++|||||||++|||++ |+.||.... .......+.... .....+.++.
T Consensus 344 --~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~~~~~p~~~~~~l~ 416 (450)
T 1k9a_A 344 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-----LKDVVPRVEKGYKMDAPDGCPPAVY 416 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC-----TTTHHHHHHTTCCCCCCTTCCHHHH
T ss_pred --cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCcCCHHHH
Confidence 11247889999999999899999999999999999998 888774311 001111111111 1122344555
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
+ ++.+||+.||++|||+.++++.|+.+...
T Consensus 417 ~---li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 417 D---VMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp H---HHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred H---HHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 5 45599999999999999999999998765
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5e-42 Score=359.95 Aligned_cols=249 Identities=18% Similarity=0.240 Sum_probs=193.3
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch--hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL--GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~--~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46788889999999999999995 5799999999965432 23568999999999999999999999999999999999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~ 479 (611)
|+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||++....... .
T Consensus 89 ~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-~ 163 (347)
T 3zgw_A 89 YCPGGELFDYIISQ-DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-D 163 (347)
T ss_dssp CCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC-C
Confidence 99999999998654 35999999999999999999999 7899999999999999999999999999998654322 1
Q ss_pred ccccCCCcccccccccccCCCCC-CcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHHHH
Q 035917 480 SFVNGDLGEFGYIAPEYSSTMVA-SLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEILQ 557 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~ 557 (611)
......+||+.|+|||++.+..+ +.++|||||||++|||++|..||.+...... ...+.... ..+...+.++.+
T Consensus 164 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~p~~~s~~~~~ 239 (347)
T 3zgw_A 164 YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL----YKKIMRGKYDVPKWLSPSSIL 239 (347)
T ss_dssp --------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHTCCCCCTTCCHHHHH
T ss_pred ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH----HHHHHcCCCCCCCCCCHHHHH
Confidence 22234569999999999988775 8999999999999999999988742100000 00000000 011223455555
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHHHH
Q 035917 558 FLKVACNCVVSRPKDRWSMYQVYQSL 583 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RPs~~evl~~L 583 (611)
++. +||+.||++|||+.|+++|-
T Consensus 240 li~---~~L~~dP~~Rps~~eil~hp 262 (347)
T 3zgw_A 240 LLQ---QMLQVDPKKRISMKNLLNHP 262 (347)
T ss_dssp HHH---HHTCSSGGGSCCHHHHHTCH
T ss_pred HHH---HHcccCHhHCcCHHHHhcCc
Confidence 555 99999999999999999873
No 59
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.4e-42 Score=373.60 Aligned_cols=259 Identities=22% Similarity=0.348 Sum_probs=202.1
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccC
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMS 402 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~ 402 (611)
.++|...+.||+|+||.||+|...++..||||+++......++|.+|+++|++++||||+++++++.+ +..++||||++
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~ 261 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 261 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhc
Confidence 35677788999999999999999888899999998766667889999999999999999999999865 67899999999
Q ss_pred CCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCcc
Q 035917 403 SGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481 (611)
Q Consensus 403 ~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~ 481 (611)
+|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....... ..
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~~ 337 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-TA 337 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce-ec
Confidence 999999997432 35899999999999999999999 78999999999999999999999999999987643221 12
Q ss_pred ccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHHH
Q 035917 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLK 560 (611)
Q Consensus 482 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 560 (611)
.....+|..|+|||.+.+..++.++|||||||++|||++ |+.||.......... ........ ......++++.+
T Consensus 338 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~-~i~~~~~~-~~~~~~~~~l~~--- 412 (452)
T 1fmk_A 338 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRM-PCPPECPESLHD--- 412 (452)
T ss_dssp -----CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH-HHHTTCCC-CCCTTSCHHHHH---
T ss_pred ccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHH-HHHcCCCC-CCCCCCCHHHHH---
Confidence 223357889999999988899999999999999999999 787774311100000 00000000 011223444444
Q ss_pred HHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 561 VACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 561 l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
++.+||+.||++|||+.++++.|+++.....
T Consensus 413 li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~ 443 (452)
T 1fmk_A 413 LMCQCWRKEPEERPTFEYLQAFLEDYFTSTE 443 (452)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHhccCC
Confidence 5559999999999999999999999876543
No 60
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.1e-41 Score=353.29 Aligned_cols=262 Identities=21% Similarity=0.281 Sum_probs=189.9
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeCC-C---CEEEEEecccc---chhHHHHHHHHHHHhccCCCCccceeeEEEeCCee
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLPD-G---SVLAVKRLNTC---KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~~-g---~~vAvK~~~~~---~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~ 394 (611)
..++|...+.||+|+||.||+|+... + ..||||+++.. ....+++.+|++++++++||||+++++++...+..
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34578888999999999999999644 3 28999999653 23457799999999999999999999999877655
Q ss_pred ------EEEEeccCCCChHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeE
Q 035917 395 ------LLIYKYMSSGTLYSLLQGNA-----TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463 (611)
Q Consensus 395 ------~lv~ey~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~k 463 (611)
++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 99999999999999985321 25899999999999999999999 78999999999999999999999
Q ss_pred EeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhh
Q 035917 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAI 542 (611)
Q Consensus 464 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~ 542 (611)
|+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||....... ......
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----~~~~~~ 253 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE----IYNYLI 253 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG----HHHHHH
T ss_pred EeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH----HHHHHh
Confidence 999999987654332222233457889999999998899999999999999999999 777764211000 000000
Q ss_pred ch--hhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 543 DK--ALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 543 ~~--~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
.. .......++++.+ ++.+||+.||++|||+.++++.|+++.+.....
T Consensus 254 ~~~~~~~~~~~~~~l~~---li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~ 303 (323)
T 3qup_A 254 GGNRLKQPPECMEEVYD---LMYQCWSADPKQRPSFTCLRMELENILGHLSVL 303 (323)
T ss_dssp TTCCCCCCTTCCHHHHH---HHHHTTCSSGGGSCCHHHHHHHHHHHHHC----
T ss_pred cCCCCCCCCccCHHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHHHhhhc
Confidence 00 0111223344444 555999999999999999999999998875444
No 61
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.2e-41 Score=346.10 Aligned_cols=254 Identities=20% Similarity=0.267 Sum_probs=192.3
Q ss_pred hcCCCCCeeeecCCceEEEEEeCC----CCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPD----GSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~----g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
++|...+.||+|+||.||+|+... +..||+|+++... ...+.+.+|+.++++++||||+++++++ .++..++|
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv 93 (281)
T 1mp8_A 15 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWII 93 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEE
T ss_pred HHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEE
Confidence 467778999999999999999643 4579999986532 3346799999999999999999999998 45678999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
|||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 9999999999999866557999999999999999999999 7899999999999999999999999999998764332
Q ss_pred CCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhch---hhcCCCCHH
Q 035917 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDK---ALCGKGYDE 553 (611)
Q Consensus 478 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~ 553 (611)
.. ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||...... .....+.. .......++
T Consensus 171 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~-----~~~~~i~~~~~~~~~~~~~~ 244 (281)
T 1mp8_A 171 YY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVIGRIENGERLPMPPNCPP 244 (281)
T ss_dssp ---------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-----GHHHHHHTTCCCCCCTTCCH
T ss_pred cc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH-----HHHHHHHcCCCCCCCCCCCH
Confidence 11 1122347889999999988889999999999999999996 77776421000 00000100 001123344
Q ss_pred HHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 554 EILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 554 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
++.+++ .+||+.||++|||+.|++++|+++.++.
T Consensus 245 ~l~~li---~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 278 (281)
T 1mp8_A 245 TLYSLM---TKCWAYDPSRRPRFTELKAQLSTILEEE 278 (281)
T ss_dssp HHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHH---HHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 555554 4999999999999999999999988753
No 62
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.4e-42 Score=350.90 Aligned_cols=255 Identities=24% Similarity=0.372 Sum_probs=189.4
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
.++|...+.||+|+||.||+|+.. ..||||+++... ...+.+.+|+.++++++||||+++++++ ..+..++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 346778899999999999999864 359999996543 2346799999999999999999999965 4566899999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~ 479 (611)
|+++++|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 176 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS 176 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccccccc
Confidence 99999999999766667999999999999999999999 789999999999999999999999999999865432222
Q ss_pred ccccCCCcccccccccccC---CCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCCCC
Q 035917 480 SFVNGDLGEFGYIAPEYSS---TMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGKGY 551 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~ 551 (611)
.......||+.|+|||.+. +..++.++||||||+++|||++|+.||... ............ +........
T Consensus 177 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 254 (289)
T 3og7_A 177 HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSP--DLSKVRSNC 254 (289)
T ss_dssp -------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCC--CTTSSCTTS
T ss_pred ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCc--chhhccccC
Confidence 2233446999999999886 567889999999999999999999887321 111111111000 000011223
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchh
Q 035917 552 DEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588 (611)
Q Consensus 552 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 588 (611)
++++.+++ .+||+.||++|||+.|+++.|+++.+
T Consensus 255 ~~~l~~li---~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 255 PKRMKRLM---AECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred CHHHHHHH---HHHccCChhhCCCHHHHHHHHHHHhh
Confidence 34455544 49999999999999999999999875
No 63
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.6e-42 Score=358.92 Aligned_cols=254 Identities=18% Similarity=0.275 Sum_probs=198.6
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCE----EEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSV----LAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~----vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
++|...+.||+|+||.||+|+.. +++. ||+|.+.... ...+.+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 35667789999999999999953 4543 7888875432 22356789999999999999999999986 556889
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 168 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD 168 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCcc
Confidence 99999999999999876557899999999999999999999 789999999999999999999999999999987554
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchh---hcCCCCH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKA---LCGKGYD 552 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~ 552 (611)
..........||..|+|||++.+..++.++|||||||++|||++ |..||.... .....+.+... ......+
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 243 (325)
T 3kex_A 169 DKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR-----LAEVPDLLEKGERLAQPQICT 243 (325)
T ss_dssp TTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC-----TTHHHHHHHTTCBCCCCTTBC
T ss_pred cccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC-----HHHHHHHHHcCCCCCCCCcCc
Confidence 43333344568889999999998899999999999999999999 888874310 00111111111 0111222
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 553 EEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 553 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
.+ +.+++.+||+.||++||++.|++++|+.+.+.
T Consensus 244 ~~---~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 244 ID---VYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TT---TTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred HH---HHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 33 34455599999999999999999999998754
No 64
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=349.73 Aligned_cols=258 Identities=21% Similarity=0.309 Sum_probs=196.8
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccCC
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~~ 403 (611)
++|...+.||+|+||.||+|+.. ++.||||++... ...+.|.+|++++++++||||+++++++. +..++||||+++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~ 83 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE-SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEG 83 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST-THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTT
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh-hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCC
Confidence 46777889999999999999984 788999999643 34567999999999999999999999886 458999999999
Q ss_pred CChHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC-eEEeecccccccCCCCCCc
Q 035917 404 GTLYSLLQGNAT--ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD-ARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 404 gsL~~~l~~~~~--~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~-~kl~DFGla~~~~~~~~~~ 480 (611)
|+|.+++..... .+++..++.++.|+++||+|||+....+|+||||||+||+++.++. +||+|||+++.....
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---- 159 (307)
T 2eva_A 84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---- 159 (307)
T ss_dssp CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----
Confidence 999999986542 5789999999999999999999432279999999999999988876 799999999765322
Q ss_pred cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhc-CChhhhhchhhcCCCCHHHHHHHH
Q 035917 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSS-GRSKEAIDKALCGKGYDEEILQFL 559 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~l~ 559 (611)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......... ........+.. ....++++.++
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l- 236 (307)
T 2eva_A 160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPL-IKNLPKPIESL- 236 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCC-BTTCCHHHHHH-
T ss_pred -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCc-ccccCHHHHHH-
Confidence 122358999999999999899999999999999999999998874210000000 00000000111 12233445554
Q ss_pred HHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCCC
Q 035917 560 KVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFSE 594 (611)
Q Consensus 560 ~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (611)
+.+||+.||++|||+.|++++|+.+.+.....+
T Consensus 237 --i~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 269 (307)
T 2eva_A 237 --MTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269 (307)
T ss_dssp --HHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTT
T ss_pred --HHHHhcCChhhCcCHHHHHHHHHHHHHhccCCC
Confidence 459999999999999999999999988765443
No 65
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.9e-41 Score=357.47 Aligned_cols=246 Identities=18% Similarity=0.250 Sum_probs=200.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch-------hHHHHHHHHHHHhccCCCCccceeeEEEeCCee
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL-------GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-------~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~ 394 (611)
.+.|...+.||+|+||.||+|+.. +|+.||||+++.... ..+.+.+|+.++++++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 456888899999999999999964 699999999965322 346799999999999999999999999999999
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC----CeEEeecccc
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF----DARIMDFGLA 470 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~----~~kl~DFGla 470 (611)
++||||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++ .+||+|||++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 9999999999999999754 46999999999999999999999 78999999999999998776 7999999999
Q ss_pred cccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchh
Q 035917 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKA 545 (611)
Q Consensus 471 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 545 (611)
+...... ......||+.|+|||++.+..++.++|||||||++|||++|..||... ..... .... ..++.
T Consensus 167 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~-~~~~--~~~~~ 240 (361)
T 2yab_A 167 HEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT-AVSY--DFDEE 240 (361)
T ss_dssp EECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHH-TTCC--CCCHH
T ss_pred eEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hcCC--CCCch
Confidence 8765432 123456999999999999889999999999999999999999887321 11111 0000 00011
Q ss_pred hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 546 LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 546 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
. ....++++.+++. +||..||++|||+.|+++|
T Consensus 241 ~-~~~~s~~~~~li~---~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 241 F-FSQTSELAKDFIR---KLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp H-HTTSCHHHHHHHH---HHSCSSTTTSCCHHHHHTS
T ss_pred h-ccCCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 0 0123445555555 9999999999999999875
No 66
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.5e-41 Score=348.28 Aligned_cols=251 Identities=21% Similarity=0.263 Sum_probs=195.3
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccch---hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKL---GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~---~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
.++|...+.||+|+||.||+|+..+|+.||||+++.... ..+.+.+|++++++++||||+++++++.+++..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 356778899999999999999998899999999965432 23678999999999999999999999999999999999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~ 479 (611)
|+++ +|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 100 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 173 (311)
T 3niz_A 100 FMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV-- 173 (311)
T ss_dssp CCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--
T ss_pred CCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc--
Confidence 9985 898888766667999999999999999999999 7899999999999999999999999999998764322
Q ss_pred ccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHH---hhcCCh---hhhh-----
Q 035917 480 SFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQL---SSSGRS---KEAI----- 542 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~---~~~~~~---~~~~----- 542 (611)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||... .... ...... ....
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 253 (311)
T 3niz_A 174 RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253 (311)
T ss_dssp C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH
T ss_pred ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchh
Confidence 12233468999999998876 56899999999999999999998876321 0000 000000 0000
Q ss_pred -chh---h-------cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 543 -DKA---L-------CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 543 -~~~---l-------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+.. . .....++++ .+++.+||+.||++|||+.|+++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~L~~dP~~Rpt~~ell~h 301 (311)
T 3niz_A 254 KQRTFQVFEKKPWSSIIPGFCQEG---IDLLSNMLCFDPNKRISARDAMNH 301 (311)
T ss_dssp HSCCCCCCCCCCHHHHSTTCCHHH---HHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhcccccccCCcHHHhCcccCHHH---HHHHHHHcCCChhHCCCHHHHhcC
Confidence 000 0 001122344 445559999999999999999975
No 67
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.7e-41 Score=347.73 Aligned_cols=261 Identities=19% Similarity=0.257 Sum_probs=203.6
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEecccc----chhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTC----KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
+.|...+.||+|+||.||+|+. .+++.||+|++... ....+.+.+|+.++.+++||||+++++++..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 4577789999999999999995 46899999998432 223467999999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 91 e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 91 EYIEGPTLSEYIESH-GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp ECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred eCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 999999999999754 36899999999999999999999 78999999999999999999999999999987643221
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHH-----HHHhhcCChhhhhchhhcCCCCHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWV-----NQLSSSGRSKEAIDKALCGKGYDE 553 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~ 553 (611)
.......||+.|+|||.+.+..++.++|||||||++|||++|+.||.... ....... ... ... ......++
T Consensus 167 -~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~-~~~-~~~-~~~~~~~~ 242 (294)
T 4eqm_A 167 -TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDS-VPN-VTT-DVRKDIPQ 242 (294)
T ss_dssp ---------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSC-CCC-HHH-HSCTTSCH
T ss_pred -cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhcc-CCC-cch-hcccCCCH
Confidence 12233469999999999999899999999999999999999998874211 1111110 000 000 11122344
Q ss_pred HHHHHHHHHhhcccCCCCCCC-CHHHHHHHHHHchhhhCCCCC
Q 035917 554 EILQFLKVACNCVVSRPKDRW-SMYQVYQSLNSIAAQHGFSER 595 (611)
Q Consensus 554 ~~~~l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~~~~~ 595 (611)
.+.+++. +||+.||++|| +++++.+.|+.+..+....+.
T Consensus 243 ~l~~li~---~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~~~~ 282 (294)
T 4eqm_A 243 SLSNVIL---RATEKDKANRYKTIQEMKDDLSSVLHENRANED 282 (294)
T ss_dssp HHHHHHH---HHSCSSGGGSCSSHHHHHHHHHTSSSSSSTTCC
T ss_pred HHHHHHH---HHhcCCHhHccccHHHHHHHHHHHHhhccCCcc
Confidence 5555554 99999999999 899999999988776655443
No 68
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=349.71 Aligned_cols=243 Identities=19% Similarity=0.149 Sum_probs=190.9
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc---hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK---LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||+||+|+.. +|+.||||++.... ....++..|+..+.++ +||||++++++|.+++..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57888999999999999999975 79999999986532 2234566677666665 8999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+ +|+|.+++......++|..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~ 212 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA 212 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCC
Confidence 999 67999988766567999999999999999999999 78999999999999999999999999999987643221
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCH-HHHHHHHhhcCChhhhhchhhcCCCCHHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNL-VDWVNQLSSSGRSKEAIDKALCGKGYDEEILQ 557 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 557 (611)
.....||+.|+|||++.+ .++.++|||||||++|||++|..++ ............. .+... ...++++.+
T Consensus 213 ---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~l~~ 283 (311)
T 3p1a_A 213 ---GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL----PPEFT-AGLSSELRS 283 (311)
T ss_dssp -----CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCC----CHHHH-TTSCHHHHH
T ss_pred ---CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCC----Ccccc-cCCCHHHHH
Confidence 223459999999998876 7899999999999999999986543 2211111111111 11111 123444555
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 558 FLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++. +||+.||++|||+.|++++
T Consensus 284 li~---~~L~~dP~~Rpt~~ell~h 305 (311)
T 3p1a_A 284 VLV---MMLEPDPKLRATAEALLAL 305 (311)
T ss_dssp HHH---HHSCSSTTTSCCHHHHHTS
T ss_pred HHH---HHcCCChhhCcCHHHHHhC
Confidence 554 9999999999999999875
No 69
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=348.97 Aligned_cols=259 Identities=17% Similarity=0.242 Sum_probs=202.8
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCC--eeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE--EKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~--~~~lv~ 398 (611)
+.|...++||+|+||.||+|+.. +++.||||+++... ...+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 46777899999999999999965 58999999997533 33567889999999999999999999998765 679999
Q ss_pred eccCCCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe----CCCCCeEEeecccccc
Q 035917 399 KYMSSGTLYSLLQGNA--TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV----DEDFDARIMDFGLAKL 472 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----d~~~~~kl~DFGla~~ 472 (611)
||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 9999999999997643 24999999999999999999999 7899999999999999 7888899999999987
Q ss_pred cCCCCCCccccCCCcccccccccccC--------CCCCCcccchHHHHHHHHHHhCCCCCHHHH---------HHHHhhc
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSS--------TMVASLKGDVYGIGVVLLELAGFKGNLVDW---------VNQLSSS 535 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~t~ksDV~SfGvvl~ell~~~~~~~~~---------~~~~~~~ 535 (611)
...... .....||+.|+|||++. +..++.++|||||||++|||++|+.||... .......
T Consensus 166 ~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 166 LEDDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CCTTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred cCCCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 654332 22346999999999875 567899999999999999999999887421 1111110
Q ss_pred CC---hhh-------hh--chhh--cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchh
Q 035917 536 GR---SKE-------AI--DKAL--CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588 (611)
Q Consensus 536 ~~---~~~-------~~--~~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 588 (611)
.. ... .+ ...+ ...........+.+++.+||+.||++|||++|++++..+.+-
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhh
Confidence 00 000 00 0000 011123344455666679999999999999999999986553
No 70
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.9e-41 Score=353.38 Aligned_cols=269 Identities=20% Similarity=0.275 Sum_probs=195.3
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEe-----CCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVV-----EEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~-----~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+. +++.||||+++.........+.|+..+..++||||+++++++.. ....++||
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~ 91 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVM 91 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEE
Confidence 5677889999999999999987 68999999996544333333445555666899999999986643 23568999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC---------CeeecCCCCCeEEeCCCCCeEEeeccc
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQP---------PFLHQNICSNVILVDEDFDARIMDFGL 469 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~---------~ivHrDlkp~NILld~~~~~kl~DFGl 469 (611)
||+++|+|.+++.... .++..+..++.|+++||+||| +. +|+||||||+|||++.++.+||+|||+
T Consensus 92 e~~~~g~L~~~l~~~~--~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 92 EYYPNGSLXKYLSLHT--SDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp CCCTTCBHHHHHHHCC--BCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred ecCCCCcHHHHHhhcc--cchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 9999999999997553 689999999999999999999 66 999999999999999999999999999
Q ss_pred ccccCCCCC------CccccCCCcccccccccccCC-------CCCCcccchHHHHHHHHHHhCCCCCHHHHHH------
Q 035917 470 AKLMTSSDE------SSFVNGDLGEFGYIAPEYSST-------MVASLKGDVYGIGVVLLELAGFKGNLVDWVN------ 530 (611)
Q Consensus 470 a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~------ 530 (611)
++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..|+.....
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~ 246 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence 987643221 112223469999999999876 4567899999999999999988655421000
Q ss_pred ----HHhhcCChhh--------hhchhhcC--CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCCCCC
Q 035917 531 ----QLSSSGRSKE--------AIDKALCG--KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFSERY 596 (611)
Q Consensus 531 ----~~~~~~~~~~--------~~~~~l~~--~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~~~ 596 (611)
.........+ ...+.+.. .........+.+++.+||+.||++|||+.|+++.|+++...+...+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~~~~ 326 (336)
T 3g2f_A 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERNKSV 326 (336)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC----
T ss_pred hhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhcccC
Confidence 0000000000 00000000 011223345666666999999999999999999999999988776644
Q ss_pred CC
Q 035917 597 DE 598 (611)
Q Consensus 597 ~~ 598 (611)
..
T Consensus 327 ~~ 328 (336)
T 3g2f_A 327 SP 328 (336)
T ss_dssp --
T ss_pred CC
Confidence 43
No 71
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=2.1e-41 Score=353.20 Aligned_cols=262 Identities=20% Similarity=0.257 Sum_probs=205.4
Q ss_pred hhcCCCCCeeeecCCceEEEEEe--------CCCCEEEEEeccccc--hhHHHHHHHHHHHhcc-CCCCccceeeEEEeC
Q 035917 323 SNSFCSENVIISTRTGTTYKAML--------PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVE 391 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~--------~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~ 391 (611)
.++|...+.||+|+||.||+|+. .++..||||+++... ...+++.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 35788889999999999999986 357789999997543 3346789999999999 899999999999999
Q ss_pred CeeEEEEeccCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe
Q 035917 392 EEKLLIYKYMSSGTLYSLLQGNA---------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV 456 (611)
Q Consensus 392 ~~~~lv~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 456 (611)
+..++||||+++|+|.+++.... ..+++..++.++.|+++||.||| +.+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 99999999999999999997543 14899999999999999999999 7899999999999999
Q ss_pred CCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhc
Q 035917 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSS 535 (611)
Q Consensus 457 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~ 535 (611)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||..........
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 270 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFK 270 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHH
Confidence 9999999999999987654332222233457889999999988889999999999999999998 877763211000000
Q ss_pred CChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCC
Q 035917 536 GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGF 592 (611)
Q Consensus 536 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (611)
......... .....+.++.++ +.+||+.||++|||+.|++++|+++......
T Consensus 271 -~~~~~~~~~-~~~~~~~~l~~l---i~~~l~~dp~~Rps~~ell~~L~~l~~~~~~ 322 (334)
T 2pvf_A 271 -LLKEGHRMD-KPANCTNELYMM---MRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322 (334)
T ss_dssp -HHHHTCCCC-CCTTCCHHHHHH---HHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred -HHhcCCCCC-CCccCCHHHHHH---HHHHccCChhhCcCHHHHHHHHHHHHhcccc
Confidence 000000001 112234445554 4499999999999999999999999887543
No 72
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.9e-41 Score=352.91 Aligned_cols=246 Identities=20% Similarity=0.193 Sum_probs=200.7
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|+.++++++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888899999999999999964 69999999996532 23467899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 85 E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 159 (337)
T 1o6l_A 85 EYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG- 159 (337)
T ss_dssp ECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-
Confidence 999999999998754 35899999999999999999999 7899999999999999999999999999998643222
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEILQ 557 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~ 557 (611)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... ..+...+.++.+
T Consensus 160 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~p~~~s~~~~~ 234 (337)
T 1o6l_A 160 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERL----FELILMEEIRFPRTLSPEAKS 234 (337)
T ss_dssp -CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCTTSCHHHHH
T ss_pred -CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHH----HHHHHcCCCCCCCCCCHHHHH
Confidence 122345699999999999999999999999999999999999988732100000 00000000 112234556666
Q ss_pred HHHHHhhcccCCCCCCC-----CHHHHHHH
Q 035917 558 FLKVACNCVVSRPKDRW-----SMYQVYQS 582 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RP-----s~~evl~~ 582 (611)
+++ +||+.||++|| ++.||++|
T Consensus 235 li~---~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 235 LLA---GLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp HHH---HHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHH---HHhhcCHHHhcCCCCCCHHHHHcC
Confidence 666 99999999999 89999887
No 73
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.2e-41 Score=357.86 Aligned_cols=248 Identities=17% Similarity=0.252 Sum_probs=197.5
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc------hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK------LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~------~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
+.|...+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+.++++++||||+++++++.+++..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4688889999999999999996 469999999985422 235779999999999999999999999999999999
Q ss_pred EEeccCCCChHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC---eEEeecccc
Q 035917 397 IYKYMSSGTLYSLLQGN---ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD---ARIMDFGLA 470 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~---~kl~DFGla 470 (611)
|||||++|+|.+++... ...+++..+..++.||+.||+||| +.+|+||||||+|||++.++. +||+|||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999998877532 235899999999999999999999 789999999999999986554 999999999
Q ss_pred cccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHh---hcCChhhhhchhhc
Q 035917 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLS---SSGRSKEAIDKALC 547 (611)
Q Consensus 471 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~---~~~~~~~~~~~~l~ 547 (611)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|..||........ ..... ...+..
T Consensus 181 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~~~~~--~~~~~~- 255 (351)
T 3c0i_A 181 IQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKY--KMNPRQ- 255 (351)
T ss_dssp EECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHHHTCC--CCCHHH-
T ss_pred eEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHHcCCC--CCCccc-
Confidence 8765432 122345799999999999998999999999999999999999988743111110 00000 000000
Q ss_pred CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 548 GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 548 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
....++++.+++. +||+.||++|||+.|+++|
T Consensus 256 ~~~~s~~~~~li~---~~L~~dP~~R~s~~e~l~h 287 (351)
T 3c0i_A 256 WSHISESAKDLVR---RMLMLDPAERITVYEALNH 287 (351)
T ss_dssp HTTSCHHHHHHHH---HHTCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 0123344555554 9999999999999999875
No 74
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.5e-42 Score=352.49 Aligned_cols=267 Identities=18% Similarity=0.235 Sum_probs=209.0
Q ss_pred HHHHHHhhhcCCCCCeeeecCCceEEEEEe------CCCCEEEEEeccccc--hhHHHHHHHHHHHhcc-CCCCccceee
Q 035917 316 LADLMAASNSFCSENVIISTRTGTTYKAML------PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQL-RHPNLAPLLG 386 (611)
Q Consensus 316 ~~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~------~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l-~H~nIv~l~g 386 (611)
..+.....++|...+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+.++.++ +||||+++++
T Consensus 19 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 19 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred ccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEE
Confidence 334444567888999999999999999984 357899999997543 2346799999999999 7999999999
Q ss_pred EEEeCC-eeEEEEeccCCCChHHhhhcCCC---------------CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 035917 387 YCVVEE-EKLLIYKYMSSGTLYSLLQGNAT---------------ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNIC 450 (611)
Q Consensus 387 ~~~~~~-~~~lv~ey~~~gsL~~~l~~~~~---------------~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk 450 (611)
++...+ ..++||||+++|+|.+++..... .+++..+..++.|+++||.||| +.+|+|||||
T Consensus 99 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dik 175 (316)
T 2xir_A 99 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLA 175 (316)
T ss_dssp EECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred EEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCc
Confidence 998755 48999999999999999976532 2789999999999999999999 7899999999
Q ss_pred CCeEEeCCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHH
Q 035917 451 SNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWV 529 (611)
Q Consensus 451 p~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~ 529 (611)
|+||+++.++.+||+|||+++...............||+.|+|||++.+..++.++|||||||++|||++ |..||....
T Consensus 176 p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 255 (316)
T 2xir_A 176 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 255 (316)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred cceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccc
Confidence 9999999999999999999987654333333334458899999999988899999999999999999998 887763210
Q ss_pred HHHhhcCChhhhhchh---hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCC
Q 035917 530 NQLSSSGRSKEAIDKA---LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGF 592 (611)
Q Consensus 530 ~~~~~~~~~~~~~~~~---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (611)
. .......+... ......+.++.+ ++.+||+.||++|||+.|++++|+++.+....
T Consensus 256 ~----~~~~~~~~~~~~~~~~~~~~~~~l~~---li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 314 (316)
T 2xir_A 256 I----DEEFCRRLKEGTRMRAPDYTTPEMYQ---TMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 314 (316)
T ss_dssp C----SHHHHHHHHHTCCCCCCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred h----hHHHHHHhccCccCCCCCCCCHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHhhhcc
Confidence 0 00000011100 011223444445 45599999999999999999999999887643
No 75
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.4e-41 Score=353.44 Aligned_cols=264 Identities=21% Similarity=0.266 Sum_probs=204.5
Q ss_pred hcCCCCCeeeecCCceEEEEEe-----CCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEe--CCeeE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-----PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVV--EEEKL 395 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~--~~~~~ 395 (611)
++|...+.||+|+||.||+|++ .+++.||||++.... ...+.+.+|++++++++||||+++++++.. .+..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4677788999999999999984 468899999997654 334679999999999999999999999874 45688
Q ss_pred EEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
+||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 999999999999999765456999999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCC-ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcC-------C---hhhhhch
Q 035917 476 SDES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSG-------R---SKEAIDK 544 (611)
Q Consensus 476 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~-------~---~~~~~~~ 544 (611)
.... .......||+.|+|||.+.+..++.++|||||||++|||++|..|+........... . ..+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEE 259 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHT
T ss_pred CCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhc
Confidence 3321 122334588899999999888899999999999999999999988643322211100 0 0111111
Q ss_pred hhc---CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 545 ALC---GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 545 ~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
... ....++++.+ ++.+||+.||++|||+.|++++|+.+.......
T Consensus 260 ~~~~~~~~~~~~~l~~---li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~ 308 (327)
T 3lxl_A 260 GQRLPAPPACPAEVHE---LMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC 308 (327)
T ss_dssp TCCCCCCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred ccCCCCCCcccHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence 111 1223444555 445999999999999999999999988765433
No 76
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.5e-41 Score=343.01 Aligned_cols=252 Identities=24% Similarity=0.362 Sum_probs=188.1
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccch-----hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKL-----GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~-----~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+.. ++.||||+++.... ..+.+.+|+++++.++||||+++++++..++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 46777899999999999999974 88999999865322 2367899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC--------CCCeEEeecccc
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE--------DFDARIMDFGLA 470 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~--------~~~~kl~DFGla 470 (611)
||+++|+|.+++.+. .+++..+..++.|++.||+|||+....+|+||||||+||+++. ++.+||+|||++
T Consensus 86 e~~~~~~L~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK--RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp ECCTTEEHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred EcCCCCCHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 999999999999643 5899999999999999999999421123999999999999986 678999999999
Q ss_pred cccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCC
Q 035917 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKG 550 (611)
Q Consensus 471 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 550 (611)
+....... ....||+.|+|||.+.+..++.++||||||+++|||++|+.||.................... ....
T Consensus 164 ~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~ 238 (271)
T 3dtc_A 164 REWHRTTK----MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP-IPST 238 (271)
T ss_dssp ----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCC-CCTT
T ss_pred cccccccc----cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCC-CCcc
Confidence 86643222 133589999999999888899999999999999999999988743111100000000000000 1122
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHc
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSI 586 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 586 (611)
.++++.+++. +||+.||++|||+.|++++|+++
T Consensus 239 ~~~~~~~li~---~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 239 CPEPFAKLME---DCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHC-
T ss_pred cCHHHHHHHH---HHhcCCcccCcCHHHHHHHHhcC
Confidence 3445555555 99999999999999999999864
No 77
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.4e-41 Score=346.35 Aligned_cols=258 Identities=23% Similarity=0.368 Sum_probs=210.5
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
..++|...+.||+|+||.||+|... ++..||+|.+.......+++.+|++++++++||||+++++++.+++..++||||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 90 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 90 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEc
Confidence 3456778899999999999999975 488999999987766678899999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC
Q 035917 401 MSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 401 ~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~ 479 (611)
+++|+|.+++.... ..+++..+..++.+++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 91 ~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 166 (288)
T 3kfa_A 91 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY- 166 (288)
T ss_dssp CTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS-
T ss_pred CCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc-
Confidence 99999999997643 46999999999999999999999 78999999999999999999999999999987653322
Q ss_pred ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhh---cCCCCHHHH
Q 035917 480 SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKAL---CGKGYDEEI 555 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~ 555 (611)
.......+|+.|+|||.+.+..++.++||||||+++|||++ |..|+..... ....+.+.... .....++++
T Consensus 167 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l 241 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKDYRMERPEGCPEKV 241 (288)
T ss_dssp EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhccCCCCCCCCCCHHH
Confidence 22233457889999999988899999999999999999998 7777632100 01111111111 112234455
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 556 LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
.+++. +||+.||++|||+.|+++.|+.+.++..
T Consensus 242 ~~li~---~~l~~dp~~Rps~~~~~~~l~~~~~~~~ 274 (288)
T 3kfa_A 242 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQESS 274 (288)
T ss_dssp HHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHH---HHhCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 55554 9999999999999999999999887643
No 78
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=350.04 Aligned_cols=246 Identities=19% Similarity=0.285 Sum_probs=199.1
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc-------hhHHHHHHHHHHHhccCCCCccceeeEEEeCCee
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK-------LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-------~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~ 394 (611)
.+.|...+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|+.++++++||||+++++++..++..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356888899999999999999964 68999999986432 1357899999999999999999999999999999
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC----CeEEeecccc
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF----DARIMDFGLA 470 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~----~~kl~DFGla 470 (611)
++||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+||+|||++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEK-ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEECCCSCBHHHHHTTS-SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 9999999999999999754 46999999999999999999999 78999999999999999877 8999999999
Q ss_pred cccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhhcCChhhhhchh
Q 035917 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSSSGRSKEAIDKA 545 (611)
Q Consensus 471 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 545 (611)
+....... .....||+.|+|||++.+..++.++|||||||++|||++|..||.. .......... .....
T Consensus 166 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~---~~~~~ 239 (326)
T 2y0a_A 166 HKIDFGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY---EFEDE 239 (326)
T ss_dssp EECCTTSC---CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCC---CCCHH
T ss_pred eECCCCCc---cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCC---CcCcc
Confidence 87643221 2334699999999999988999999999999999999999988732 1111110000 00000
Q ss_pred hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 546 LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 546 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
. ....+.++.+++. +||+.||++|||+.|+++|
T Consensus 240 ~-~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 240 Y-FSNTSALAKDFIR---RLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp H-HTTSCHHHHHHHH---HHSCSSGGGSCCHHHHHHS
T ss_pred c-cccCCHHHHHHHH---HHccCChhhCCCHHHHhcC
Confidence 0 0123344455544 9999999999999999986
No 79
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.8e-41 Score=340.30 Aligned_cols=250 Identities=23% Similarity=0.365 Sum_probs=199.1
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeC--CeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE--EEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~--~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+.. ++.||||+++... ...+++.+|+.++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46777899999999999999984 8899999997543 3346799999999999999999999999877 6789999
Q ss_pred eccCCCChHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 399 KYMSSGTLYSLLQGNAT-ELDWPTRFRIGLGAARGLAWLHHGCQPP--FLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
||+++|+|.+++..... .+++..+..++.|++.||+||| +.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~ 165 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS 165 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceeeecc
Confidence 99999999999987643 6899999999999999999999 667 99999999999999999999999998764321
Q ss_pred CCCCccccCCCcccccccccccCCCCCCc---ccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCCCH
Q 035917 476 SDESSFVNGDLGEFGYIAPEYSSTMVASL---KGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYD 552 (611)
Q Consensus 476 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~---ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 552 (611)
....||+.|+|||.+.+..++. ++|||||||++|||++|+.||..................+.. ....+
T Consensus 166 -------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 237 (271)
T 3kmu_A 166 -------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI-PPGIS 237 (271)
T ss_dssp -------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCC-CTTCC
T ss_pred -------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCC-CCCCC
Confidence 2235899999999987655444 799999999999999999887432111100000000011111 12334
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchh
Q 035917 553 EEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAA 588 (611)
Q Consensus 553 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~ 588 (611)
+++.+++. +||+.||++|||+.|+++.|+++.+
T Consensus 238 ~~~~~li~---~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 238 PHVSKLMK---ICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred HHHHHHHH---HHcCCChhhCcCHHHHHHHHHHhhc
Confidence 45555555 9999999999999999999998864
No 80
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-41 Score=357.84 Aligned_cols=257 Identities=24% Similarity=0.311 Sum_probs=192.7
Q ss_pred cCCCCCeeeecCCceEEEEEeC--C--CCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEe-CCeeEEE
Q 035917 325 SFCSENVIISTRTGTTYKAMLP--D--GSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVV-EEEKLLI 397 (611)
Q Consensus 325 ~f~~~~~ig~G~~g~Vy~~~~~--~--g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~-~~~~~lv 397 (611)
.|...+.||+|+||.||+|+.. + +..||||.++... ...++|.+|+.++++++||||++++++|.. ++..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3555689999999999999853 2 2468999986532 345779999999999999999999999765 4578999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
|||+++|+|.+++......+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 9999999999999876667899999999999999999999 7899999999999999999999999999998664332
Q ss_pred CC--ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhc---hhhcCCCC
Q 035917 478 ES--SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAID---KALCGKGY 551 (611)
Q Consensus 478 ~~--~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~~~ 551 (611)
.. .......+|+.|+|||.+.+..++.++|||||||++|||++ +..||... ........+. ........
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~-----~~~~~~~~~~~~~~~~~p~~~ 321 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----NTFDITVYLLQGRRLLQPEYC 321 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS-----CSSCHHHHHHTTCCCCCCTTC
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC-----CHHHHHHHHHcCCCCCCCCCC
Confidence 11 11223457889999999998899999999999999999999 45554321 0000100000 01112233
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCC
Q 035917 552 DEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGF 592 (611)
Q Consensus 552 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (611)
++++.+ ++.+||+.||++||++.|++++|+++......
T Consensus 322 ~~~l~~---li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~ 359 (373)
T 3c1x_A 322 PDPLYE---VMLKCWHPKAEMRPSFSELVSRISAIFSTFIG 359 (373)
T ss_dssp CHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCS
T ss_pred CHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHHhccc
Confidence 445555 45599999999999999999999999987653
No 81
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=351.74 Aligned_cols=255 Identities=11% Similarity=0.072 Sum_probs=207.4
Q ss_pred hhhcCCCCCeeeecCCceEEEEE------eCCCCEEEEEeccccchhHHHHHHHHHHHhccC---CCCccceeeEEEeCC
Q 035917 322 ASNSFCSENVIISTRTGTTYKAM------LPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR---HPNLAPLLGYCVVEE 392 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~------~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~---H~nIv~l~g~~~~~~ 392 (611)
..+.|...+.||+|+||.||+|+ ..+++.||||+++.. ...++.+|++++.+++ |+||+++++++..++
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~ 140 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN 140 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC
Confidence 35678888999999999999994 456899999999654 3556888888888887 999999999999999
Q ss_pred eeEEEEeccCCCChHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC----------
Q 035917 393 EKLLIYKYMSSGTLYSLLQG----NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE---------- 458 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~---------- 458 (611)
..++|||||++|+|.+++.. ....++|..++.|+.|++.||+||| +.+|+||||||+|||++.
T Consensus 141 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~~ 217 (365)
T 3e7e_A 141 GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDEDD 217 (365)
T ss_dssp CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC-----
T ss_pred CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCcccccc
Confidence 99999999999999999964 2346999999999999999999999 889999999999999998
Q ss_pred -CCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCC
Q 035917 459 -DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGR 537 (611)
Q Consensus 459 -~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~ 537 (611)
++.+||+|||+++.+............+||+.|+|||++.+..++.++|||||||++|||++|+.||.... .
T Consensus 218 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-------~ 290 (365)
T 3e7e_A 218 LSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNE-------G 290 (365)
T ss_dssp -CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEE-------T
T ss_pred ccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCC-------C
Confidence 89999999999986543333334455679999999999999999999999999999999999998873210 0
Q ss_pred hhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCC-CCHHHHHHHHHHchhhhC
Q 035917 538 SKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDR-WSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 538 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R-Ps~~evl~~L~~i~~~~~ 591 (611)
....+...+.....++...++++ .|++.+|.+| |+++++.+.|+++.+...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~---~~l~~~p~~r~~~~~~l~~~l~~~l~~~~ 342 (365)
T 3e7e_A 291 GECKPEGLFRRLPHLDMWNEFFH---VMLNIPDCHHLPSLDLLRQKLKKVFQQHY 342 (365)
T ss_dssp TEEEECSCCTTCSSHHHHHHHHH---HHHCCCCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred CceeechhccccCcHHHHHHHHH---HHcCCCCCCcchHHHHHHHHHHHHHHHhh
Confidence 00111122222234566666666 9999999998 578888999998877643
No 82
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.9e-41 Score=347.70 Aligned_cols=257 Identities=19% Similarity=0.329 Sum_probs=201.4
Q ss_pred cCCCCCeeeecCCceEEEEEe-----CCCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeC--CeeE
Q 035917 325 SFCSENVIISTRTGTTYKAML-----PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE--EEKL 395 (611)
Q Consensus 325 ~f~~~~~ig~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~--~~~~ 395 (611)
.|...+.||+|+||.||+|++ .+++.||||+++... ...+.+.+|++++++++||||+++++++... +..+
T Consensus 22 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 101 (302)
T 4e5w_A 22 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 101 (302)
T ss_dssp GEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEE
T ss_pred hhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEE
Confidence 466778999999999999983 468999999997533 3347799999999999999999999999876 5689
Q ss_pred EEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
+||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 102 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 178 (302)
T 4e5w_A 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 178 (302)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECcccccccccC
Confidence 999999999999999665557999999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCC-ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHh---hcC----Ch---hhhhch
Q 035917 476 SDES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLS---SSG----RS---KEAIDK 544 (611)
Q Consensus 476 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~---~~~----~~---~~~~~~ 544 (611)
.... .......||..|+|||.+.+..++.++||||||+++|||++|..|+........ ... .. ...+..
T Consensus 179 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (302)
T 4e5w_A 179 DKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKE 258 (302)
T ss_dssp TCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHT
T ss_pred CCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhc
Confidence 3321 222334688899999999888899999999999999999999876432211110 000 00 001111
Q ss_pred hh---cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHch
Q 035917 545 AL---CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIA 587 (611)
Q Consensus 545 ~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 587 (611)
.. .....++++.+++ .+||+.||++|||+.|+++.|+++.
T Consensus 259 ~~~~~~~~~~~~~l~~li---~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 259 GKRLPCPPNCPDEVYQLM---RKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp TCCCCCCTTCCHHHHHHH---HHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCHHHHHHH---HHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 00 1122344555544 4999999999999999999999875
No 83
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.3e-41 Score=352.20 Aligned_cols=254 Identities=20% Similarity=0.325 Sum_probs=195.5
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCE----EEEEecccc--chhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSV----LAVKRLNTC--KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~----vAvK~~~~~--~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
++|...+.||+|+||.||+|+. .+++. ||+|.+... ....+++.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 4677889999999999999995 34543 577777542 234678999999999999999999999998654 789
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
|+||+++|+|.+++......+++..++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~ 170 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE 170 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC-------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCc
Confidence 99999999999999876667999999999999999999999 789999999999999999999999999999876543
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhh---cCCCCH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKAL---CGKGYD 552 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~ 552 (611)
..........||+.|+|||.+.+..++.++|||||||++|||++ |..||..... ......+.... .....+
T Consensus 171 ~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 245 (327)
T 3lzb_A 171 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SEISSILEKGERLPQPPICT 245 (327)
T ss_dssp ---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GGHHHHHHTTCCCCCCTTBC
T ss_pred cccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HHHHHHHHcCCCCCCCccCC
Confidence 33333334457889999999999899999999999999999999 8888743110 01111111111 112234
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 553 EEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 553 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
.++.. ++.+||+.||++||++.|+++.|+++.+.
T Consensus 246 ~~l~~---li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 246 IDVYM---IMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp HHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred HHHHH---HHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 44444 55599999999999999999999998854
No 84
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.1e-41 Score=344.41 Aligned_cols=250 Identities=20% Similarity=0.263 Sum_probs=194.6
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchh---HHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLG---EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~---~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
++|...+.||+|+||.||+|+..+|+.||||+++..... .+.+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 357778899999999999999988999999999654322 36788999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 155 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--R 155 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--c
Confidence 986 999998866567999999999999999999999 7899999999999999999999999999998764321 1
Q ss_pred cccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhh---cCC---hhh-----hhc
Q 035917 481 FVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSS---SGR---SKE-----AID 543 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~---~~~---~~~-----~~~ 543 (611)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.. ....... ... ... ..+
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T 1ob3_A 156 KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235 (288)
T ss_dssp ------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCC
T ss_pred ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccc
Confidence 1223468999999999865 4589999999999999999999887632 1111100 000 000 000
Q ss_pred hhh----------cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 544 KAL----------CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 544 ~~l----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+.. .....++++.+++. +||+.||++|||+.|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 236 PNFTVYEPLPWESFLKGLDESGIDLLS---KMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp TTCCCCCCCCGGGTCCSCCHHHHHHHH---HHTCSSTTTSCCHHHHHTS
T ss_pred cccccccCccHHHHhhhcCHHHHHHHH---HHcCCCcccCCCHHHHhcC
Confidence 000 01123445555555 9999999999999999875
No 85
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.5e-41 Score=343.00 Aligned_cols=257 Identities=21% Similarity=0.338 Sum_probs=206.5
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccCC
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~~ 403 (611)
++|...+.||+|+||.||+|...+++.||||.++......+.+.+|++++++++||||+++++++. .+..++||||+++
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~ 91 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMEN 91 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTT
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCC
Confidence 467778999999999999999988889999999876666788999999999999999999999986 4568999999999
Q ss_pred CChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCccc
Q 035917 404 GTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFV 482 (611)
Q Consensus 404 gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~~ 482 (611)
|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++....... ...
T Consensus 92 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~ 167 (279)
T 1qpc_A 92 GSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TAR 167 (279)
T ss_dssp CBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-ECC
T ss_pred CCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc-ccc
Confidence 99999997543 26899999999999999999999 78999999999999999999999999999987654321 122
Q ss_pred cCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHHHH
Q 035917 483 NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKV 561 (611)
Q Consensus 483 ~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l 561 (611)
....++..|+|||.+.+..++.++||||||+++|||++ |+.||.......... ....... .......++++.+++.
T Consensus 168 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~l~~li~- 244 (279)
T 1qpc_A 168 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQ-NLERGYR-MVRPDNCPEELYQLMR- 244 (279)
T ss_dssp TTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH-HHHTTCC-CCCCTTCCHHHHHHHH-
T ss_pred cCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHH-HHhcccC-CCCcccccHHHHHHHH-
Confidence 23457889999999988889999999999999999998 777764211100000 0000000 0112233455555555
Q ss_pred HhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 562 ACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 562 ~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
+||+.||++|||+.++++.|+++....
T Consensus 245 --~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 245 --LCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp --HHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --HHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999988764
No 86
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1e-40 Score=341.51 Aligned_cols=257 Identities=21% Similarity=0.282 Sum_probs=201.9
Q ss_pred cCCCCCeeeecCCceEEEEEeC-CC---CEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCee-EEE
Q 035917 325 SFCSENVIISTRTGTTYKAMLP-DG---SVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK-LLI 397 (611)
Q Consensus 325 ~f~~~~~ig~G~~g~Vy~~~~~-~g---~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~-~lv 397 (611)
.|...++||+|+||.||+|+.. ++ ..||+|.++... ...+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 3445689999999999999853 33 379999997533 2346799999999999999999999999876655 899
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
|||+.+|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999999999876667899999999999999999999 7899999999999999999999999999998654322
Q ss_pred --CCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhch---hhcCCCCH
Q 035917 478 --ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDK---ALCGKGYD 552 (611)
Q Consensus 478 --~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~ 552 (611)
.........+|+.|+|||.+.+..++.++||||||+++|||++|..|+..... .......+.. .......+
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 254 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID----PFDLTHFLAQGRRLPQPEYCP 254 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC----GGGHHHHHHTTCCCCCCTTCC
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC----HHHHHHHhhcCCCCCCCccch
Confidence 11122334588999999999999999999999999999999996655321000 0001111110 11122334
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 553 EEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 553 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
+++.+++. +||+.||++|||+.++++.|+++.++..
T Consensus 255 ~~l~~li~---~~l~~~p~~Rps~~~ll~~l~~~~~~l~ 290 (298)
T 3pls_A 255 DSLYQVMQ---QCWEADPAVRPTFRVLVGEVEQIVSALL 290 (298)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHH---HHccCChhhCcCHHHHHHHHHHHHHHHh
Confidence 45555555 9999999999999999999999988864
No 87
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-41 Score=343.24 Aligned_cols=257 Identities=19% Similarity=0.277 Sum_probs=204.4
Q ss_pred cCCCCC-eeeecCCceEEEEEeC---CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 325 SFCSEN-VIISTRTGTTYKAMLP---DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 325 ~f~~~~-~ig~G~~g~Vy~~~~~---~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
+|...+ .||+|+||.||+|... ++..||||+++... ...+++.+|++++++++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 343444 8999999999999853 57889999997642 3456799999999999999999999999 556789999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 999999999999766567999999999999999999999 78999999999999999999999999999987643322
Q ss_pred C-ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhch---hhcCCCCHH
Q 035917 479 S-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDK---ALCGKGYDE 553 (611)
Q Consensus 479 ~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~ 553 (611)
. .......||+.|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+.. .......++
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-----~~~~i~~~~~~~~~~~~~~ 240 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-----VMAFIEQGKRMECPPECPP 240 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHH-----HHHHHHTTCCCCCCTTCCH
T ss_pred eeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHH-----HHHHHhcCCcCCCCCCcCH
Confidence 1 11223357899999999988889999999999999999998 888874211000 0000100 011123344
Q ss_pred HHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 554 EILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 554 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
++.+++. +||+.||++||++.|++++|+++..+....
T Consensus 241 ~l~~li~---~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~ 277 (287)
T 1u59_A 241 ELYALMS---DCWIYKWEDRPDFLTVEQRMRACYYSLASK 277 (287)
T ss_dssp HHHHHHH---HTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHH---HHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence 5555555 999999999999999999999998886544
No 88
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.3e-41 Score=367.18 Aligned_cols=258 Identities=18% Similarity=0.166 Sum_probs=207.6
Q ss_pred ccHHHHHHhhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch----hHHHHHHHHHHHhccCCCCccceeeEE
Q 035917 314 VKLADLMAASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL----GEKKFRNEMNRLGQLRHPNLAPLLGYC 388 (611)
Q Consensus 314 ~~~~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~Ev~~l~~l~H~nIv~l~g~~ 388 (611)
+++.++...+++|...++||+|+||.||+|+.. +++.||||+++.... ..+.+.+|+.++..++||||++++++|
T Consensus 64 ~~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 143 (437)
T 4aw2_A 64 SKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF 143 (437)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred chhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE
Confidence 345566667889999999999999999999975 488999999965322 123488999999999999999999999
Q ss_pred EeCCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecc
Q 035917 389 VVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468 (611)
Q Consensus 389 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFG 468 (611)
.+++..++|||||++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||
T Consensus 144 ~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFG 220 (437)
T 4aw2_A 144 QDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFG 220 (437)
T ss_dssp ECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchh
Confidence 9999999999999999999999875557999999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCcccccccccccC-----CCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhc
Q 035917 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSS-----TMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID 543 (611)
Q Consensus 469 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~ 543 (611)
+++....... ......+||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...++.
T Consensus 221 la~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~----~~~i~~ 295 (437)
T 4aw2_A 221 SCLKLMEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET----YGKIMN 295 (437)
T ss_dssp TCEECCTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHT
T ss_pred hhhhcccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHH----HHhhhh
Confidence 9987643322 2223457999999999986 56789999999999999999999998742100000 001111
Q ss_pred h----hhc--CCCCHHHHHHHHHHHhhcccCCCCC--CCCHHHHHHH
Q 035917 544 K----ALC--GKGYDEEILQFLKVACNCVVSRPKD--RWSMYQVYQS 582 (611)
Q Consensus 544 ~----~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 582 (611)
. ... ....++++.++++ +|+..+|++ ||+++|+++|
T Consensus 296 ~~~~~~~p~~~~~~s~~~~dLi~---~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 296 HKERFQFPTQVTDVSENAKDLIR---RLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp HHHHCCCCSSCCCSCHHHHHHHH---TTSSCGGGCTTTTTTHHHHTS
T ss_pred ccccccCCcccccCCHHHHHHHH---HHhcccccccCCCCHHHHhCC
Confidence 0 010 1224566667666 999888888 9999999987
No 89
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=5.6e-41 Score=343.09 Aligned_cols=250 Identities=18% Similarity=0.220 Sum_probs=194.6
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
++|...+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 35777889999999999999964 68999999996432 234678999999999999999999999999999999999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~ 479 (611)
|+++ +|.+.+......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~-~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 155 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-- 155 (292)
T ss_dssp CCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--
Confidence 9986 676766655567999999999999999999999 7899999999999999999999999999998764322
Q ss_pred ccccCCCcccccccccccCCCC-CCcccchHHHHHHHHHHhCCCCCHH------HHHHHHhh---cC---Chhhhh---c
Q 035917 480 SFVNGDLGEFGYIAPEYSSTMV-ASLKGDVYGIGVVLLELAGFKGNLV------DWVNQLSS---SG---RSKEAI---D 543 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~SfGvvl~ell~~~~~~~------~~~~~~~~---~~---~~~~~~---~ 543 (611)
.......||+.|+|||++.+.. ++.++|||||||++|||+++..|+. +....... .. ...... +
T Consensus 156 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 235 (292)
T 3o0g_A 156 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235 (292)
T ss_dssp SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTT
T ss_pred ccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccc
Confidence 2223446899999999987765 7999999999999999998877641 11111110 00 000000 0
Q ss_pred hh------------hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 544 KA------------LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 544 ~~------------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.. ......++++.++++ +||+.||++|||++|+++|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~R~t~~e~l~h 283 (292)
T 3o0g_A 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQ---NLLKCNPVQRISAEEALQH 283 (292)
T ss_dssp CCCCCCCCTTCCCTTTSTTCCHHHHHHHH---HHSCSSGGGSCCHHHHHTS
T ss_pred ccccccccCCcchhhcccccChHHHHHHH---HHhccChhhCCCHHHHhcC
Confidence 00 000123445555555 9999999999999999875
No 90
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.5e-41 Score=340.77 Aligned_cols=252 Identities=19% Similarity=0.303 Sum_probs=203.5
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEe-----------
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVV----------- 390 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~----------- 390 (611)
.++|...+.||+|+||.||+|+.. +++.||+|+++... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 86 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKN 86 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccc
Confidence 457888899999999999999975 79999999996543 457899999999999999999998864
Q ss_pred -----CCeeEEEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEE
Q 035917 391 -----EEEKLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464 (611)
Q Consensus 391 -----~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl 464 (611)
....++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl 163 (284)
T 2a19_B 87 SSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKI 163 (284)
T ss_dssp --CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEE
T ss_pred ccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEEE
Confidence 345789999999999999997543 46999999999999999999999 789999999999999999999999
Q ss_pred eecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhch
Q 035917 465 MDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDK 544 (611)
Q Consensus 465 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (611)
+|||+++....... .....||+.|+|||.+.+..++.++||||||+++|||+++..++........ ...+
T Consensus 164 ~Dfg~~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~------~~~~- 233 (284)
T 2a19_B 164 GDFGLVTSLKNDGK---RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFT------DLRD- 233 (284)
T ss_dssp CCCTTCEESSCCSC---CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHH------HHHT-
T ss_pred Ccchhheecccccc---ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHHHHHH------Hhhc-
Confidence 99999987654321 2234689999999999888899999999999999999999988754221110 1111
Q ss_pred hhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 545 ALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 545 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
.......+.++.+++. +||+.||++|||+.|++++|+.+.+.....
T Consensus 234 ~~~~~~~~~~~~~li~---~~l~~dp~~Rps~~e~l~~l~~~~~~~~~~ 279 (284)
T 2a19_B 234 GIISDIFDKKEKTLLQ---KLLSKKPEDRPNTSEILRTLTVWKKSPEKN 279 (284)
T ss_dssp TCCCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHTC-----
T ss_pred ccccccCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHHhhCCCcc
Confidence 1112234455555555 999999999999999999999987765433
No 91
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6.4e-41 Score=347.27 Aligned_cols=259 Identities=19% Similarity=0.260 Sum_probs=204.1
Q ss_pred CCCCCeeeecCCceEEEEEe-----CCCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeC--CeeEE
Q 035917 326 FCSENVIISTRTGTTYKAML-----PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE--EEKLL 396 (611)
Q Consensus 326 f~~~~~ig~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~--~~~~l 396 (611)
|...+.||+|+||.||++.+ .+++.||||+++... ...+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 36678999999999999874 268899999997543 3346799999999999999999999999874 57899
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++... .+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 113 v~e~~~~~~L~~~l~~~--~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH--SIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EECCCTTCBHHHHGGGS--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEecccCCcHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999999764 4899999999999999999999 789999999999999999999999999999877543
Q ss_pred CCC-ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHh---hcC-------Chhhhhchh
Q 035917 477 DES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLS---SSG-------RSKEAIDKA 545 (611)
Q Consensus 477 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~---~~~-------~~~~~~~~~ 545 (611)
... .......||..|+|||.+.+..++.++||||||+++|||++|..|+........ ... ...+.++..
T Consensus 188 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (318)
T 3lxp_A 188 HEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG 267 (318)
T ss_dssp CSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT
T ss_pred ccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc
Confidence 321 122334588899999999888899999999999999999999887643221110 000 011111111
Q ss_pred hc---CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCC
Q 035917 546 LC---GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGF 592 (611)
Q Consensus 546 l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (611)
.. ....+.++.+ ++.+||+.||++|||+.|+++.|+.+.+++..
T Consensus 268 ~~~~~~~~~~~~l~~---li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~ 314 (318)
T 3lxp_A 268 ERLPRPDKCPAEVYH---LMKNCWETEASFRPTFENLIPILKTVHEKYQG 314 (318)
T ss_dssp CCCCCCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCccccHHHHH---HHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence 11 1223344444 55599999999999999999999999888643
No 92
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=5.8e-41 Score=363.21 Aligned_cols=248 Identities=18% Similarity=0.180 Sum_probs=199.6
Q ss_pred hhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 322 ASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
..++|...+.||+|+||.||+|.. .+|+.||+|++.... ...+.+.+|++++++++||||+++++++.+++..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 456788899999999999999985 578999999996543 2346789999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC---CCCCeEEeecccccccC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD---EDFDARIMDFGLAKLMT 474 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld---~~~~~kl~DFGla~~~~ 474 (611)
||||++|+|.+.+... ..+++..+..++.||+.||.||| +.+|+||||||+|||++ .++.+||+|||+++...
T Consensus 89 ~E~~~gg~L~~~i~~~-~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR-EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp ECCCBCCBHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEeCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 9999999999988765 45899999999999999999999 78999999999999998 46789999999998764
Q ss_pred CCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCC
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGK 549 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~ 549 (611)
... .......||+.|+|||++.+..++.++|||||||++|||++|..||... ..... .+... .+.....
T Consensus 165 ~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~-~~~~~---~~~~~~~ 238 (444)
T 3soa_A 165 GEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIK-AGAYD---FPSPEWD 238 (444)
T ss_dssp TTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH-HTCCC---CCTTTTT
T ss_pred CCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHH-hCCCC---CCccccc
Confidence 332 2223457999999999999989999999999999999999999887321 11111 00000 0000112
Q ss_pred CCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 550 GYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 550 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..++++.+++. +||+.||++|||+.|+++|
T Consensus 239 ~~s~~~~~li~---~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 239 TVTPEAKDLIN---KMLTINPSKRITAAEALKH 268 (444)
T ss_dssp TSCHHHHHHHH---HHSCSSTTTSCCHHHHHHS
T ss_pred cCCHHHHHHHH---HHcCCChhHCCCHHHHhcC
Confidence 33455566555 9999999999999999986
No 93
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.6e-41 Score=343.28 Aligned_cols=244 Identities=24% Similarity=0.405 Sum_probs=195.5
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchh---H-----HHHHHHHHHHhccCCCCccceeeEEEeCCee
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLG---E-----KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~---~-----~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~ 394 (611)
++|...+.||+|+||.||+|+. .+++.||||++...... . +++.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5677788999999999999996 57999999998543211 1 67899999999999999999999986554
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCeEEeCCCCC-----eEEeec
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPP--FLHQNICSNVILVDEDFD-----ARIMDF 467 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILld~~~~-----~kl~DF 467 (611)
++||||+++|+|.+++......+++..+..++.|++.||+||| +.+ |+||||||+||+++.++. +||+||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 7999999999999998776667999999999999999999999 677 999999999999987776 999999
Q ss_pred ccccccCCCCCCccccCCCccccccccccc--CCCCCCcccchHHHHHHHHHHhCCCCCHHHHH-------HHHhhcCCh
Q 035917 468 GLAKLMTSSDESSFVNGDLGEFGYIAPEYS--STMVASLKGDVYGIGVVLLELAGFKGNLVDWV-------NQLSSSGRS 538 (611)
Q Consensus 468 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~-------~~~~~~~~~ 538 (611)
|+++.... ......||+.|+|||.+ ....++.++|||||||++|||++|+.||.... ......
T Consensus 174 g~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--- 245 (287)
T 4f0f_A 174 GLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE--- 245 (287)
T ss_dssp TTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHS---
T ss_pred Cccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhcc---
Confidence 99985432 12334699999999998 44567899999999999999999998874211 000000
Q ss_pred hhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHc
Q 035917 539 KEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSI 586 (611)
Q Consensus 539 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i 586 (611)
...+. .....++++.+++. +||+.||++|||+.|+++.|+++
T Consensus 246 --~~~~~-~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 246 --GLRPT-IPEDCPPRLRNVIE---LCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --CCCCC-CCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --CCCCC-CCcccCHHHHHHHH---HHhcCChhhCcCHHHHHHHHHhC
Confidence 00111 11233445555555 99999999999999999999864
No 94
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1e-42 Score=356.95 Aligned_cols=264 Identities=23% Similarity=0.330 Sum_probs=188.2
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhc--cCCCCccceeeEEEeCC----eeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQ--LRHPNLAPLLGYCVVEE----EKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~--l~H~nIv~l~g~~~~~~----~~~l 396 (611)
.++|...+.||+|+||.||+|+. +|+.||||+++.. ....+.+|.+++.. ++||||+++++++...+ ..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-T--THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEeccc--chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 35788999999999999999987 4899999998653 34567788888887 79999999999998876 7899
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeecCCCCCeEEeCCCCCeEEeeccccc
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGC-----QPPFLHQNICSNVILVDEDFDARIMDFGLAK 471 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlkp~NILld~~~~~kl~DFGla~ 471 (611)
||||+++|+|.+++... .+++..+..++.|++.||+|||... +.+|+||||||+|||++.++.+||+|||+++
T Consensus 79 v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EEECCTTCCHHHHHHHC--CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred EEeccCCCCHHHHHhcc--CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 99999999999999754 4788889999999999999999321 5789999999999999999999999999998
Q ss_pred ccCCCCCCc--cccCCCcccccccccccCCC------CCCcccchHHHHHHHHHHhCC----------CCCHHHHHHHHh
Q 035917 472 LMTSSDESS--FVNGDLGEFGYIAPEYSSTM------VASLKGDVYGIGVVLLELAGF----------KGNLVDWVNQLS 533 (611)
Q Consensus 472 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~t~ksDV~SfGvvl~ell~~----------~~~~~~~~~~~~ 533 (611)
......... ......||+.|+|||++.+. .++.++|||||||++|||++| ..||.+......
T Consensus 157 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3gxj_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp CEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CC
T ss_pred eccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCc
Confidence 664433211 12234699999999998765 445789999999999999988 555532111100
Q ss_pred hcCChhh-hhchhhcCCCC-----HHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 534 SSGRSKE-AIDKALCGKGY-----DEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 534 ~~~~~~~-~~~~~l~~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
....... ........... .+....+.+++.+||+.||++|||+.||++.|+++.++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 237 SVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp CCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC--
T ss_pred cHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhcc
Confidence 0111111 11111111111 1445567777779999999999999999999999887654
No 95
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8e-41 Score=345.25 Aligned_cols=260 Identities=20% Similarity=0.275 Sum_probs=192.5
Q ss_pred HhhhcCCCCCeeeecCCceEEEEEeC----CCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCe
Q 035917 321 AASNSFCSENVIISTRTGTTYKAMLP----DGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393 (611)
Q Consensus 321 ~~t~~f~~~~~ig~G~~g~Vy~~~~~----~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~ 393 (611)
...++|...+.||+|+||.||+|... ++..||||+++... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567888899999999999999853 34589999997543 233678999999999999999999999987553
Q ss_pred -----eEEEEeccCCCChHHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeE
Q 035917 394 -----KLLIYKYMSSGTLYSLLQG-----NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDAR 463 (611)
Q Consensus 394 -----~~lv~ey~~~gsL~~~l~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~k 463 (611)
.++||||+++|+|.+++.. ....+++..++.++.|+++||.||| +.+|+||||||+||+++.++.+|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~k 187 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVC 187 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEE
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEE
Confidence 4999999999999999842 2246999999999999999999999 88999999999999999999999
Q ss_pred EeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhh
Q 035917 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAI 542 (611)
Q Consensus 464 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~ 542 (611)
|+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |..||...... ...+.+
T Consensus 188 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~-----~~~~~~ 262 (313)
T 3brb_A 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH-----EMYDYL 262 (313)
T ss_dssp ECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-----GHHHHH
T ss_pred EeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH-----HHHHHH
Confidence 999999987644332222223457889999999998899999999999999999999 77666321000 000000
Q ss_pred chh---hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 543 DKA---LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 543 ~~~---l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
... ......++++.+ ++.+||+.||++|||+.+++++|+++.+..+
T Consensus 263 ~~~~~~~~~~~~~~~l~~---li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 263 LHGHRLKQPEDCLDELYE---IMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp HTTCCCCCBTTCCHHHHH---HHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred HcCCCCCCCccccHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 000 011223344444 5559999999999999999999999987753
No 96
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-41 Score=350.50 Aligned_cols=260 Identities=21% Similarity=0.295 Sum_probs=197.6
Q ss_pred cCCCCCeeeecCCceEEEEEeCC-----CCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 325 SFCSENVIISTRTGTTYKAMLPD-----GSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 325 ~f~~~~~ig~G~~g~Vy~~~~~~-----g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
.|...+.||+|+||.||+|+... +..||||+++... ....++.+|+.++++++||||+++++++...+..++|
T Consensus 45 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 124 (333)
T 1mqb_A 45 CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMII 124 (333)
T ss_dssp TEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEE
Confidence 44556899999999999998642 2469999997543 2345789999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
|||+++|+|.+++......+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 125 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 201 (333)
T 1mqb_A 125 TEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 201 (333)
T ss_dssp EECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC--------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhcccc
Confidence 9999999999999876567999999999999999999999 7899999999999999999999999999998764332
Q ss_pred CC-ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHH
Q 035917 478 ES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEI 555 (611)
Q Consensus 478 ~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 555 (611)
.. .......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||.......... ........ ......++++
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~-~~~~~~~~-~~~~~~~~~l 279 (333)
T 1mqb_A 202 EATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMK-AINDGFRL-PTPMDCPSAI 279 (333)
T ss_dssp ---------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-HHHTTCCC-CCCTTCBHHH
T ss_pred ccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHH-HHHCCCcC-CCcccCCHHH
Confidence 11 11122346889999999988899999999999999999998 888874211100000 00000000 0112233444
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCC
Q 035917 556 LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGF 592 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (611)
.+ ++.+||+.||++||++.|++++|+++.+....
T Consensus 280 ~~---li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~~ 313 (333)
T 1mqb_A 280 YQ---LMMQCWQQERARRPKFADIVSILDKLIRAPDS 313 (333)
T ss_dssp HH---HHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred HH---HHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 44 55599999999999999999999998876543
No 97
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=4.2e-41 Score=355.30 Aligned_cols=247 Identities=20% Similarity=0.224 Sum_probs=199.0
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
..++|...+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3567889999999999999999964 68999999996543 2346789999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCC---CCeEEeecccccccC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED---FDARIMDFGLAKLMT 474 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~---~~~kl~DFGla~~~~ 474 (611)
|||+++|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.+ +.+||+|||+++...
T Consensus 107 ~e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp ECCCCSCBHHHHHTTC-SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 9999999999998754 46899999999999999999999 7899999999999999865 459999999998765
Q ss_pred CCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCC
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGK 549 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~ 549 (611)
.... .....||+.|+|||++.+..++.++|||||||++|||++|..||... ..... .+... .+.....
T Consensus 183 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~-~~~~~---~~~~~~~ 255 (362)
T 2bdw_A 183 DSEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIK-AGAYD---YPSPEWD 255 (362)
T ss_dssp TCCS---CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HTCCC---CCTTGGG
T ss_pred CCcc---cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-hCCCC---CCccccc
Confidence 3321 23346999999999999989999999999999999999999887321 11111 00000 0000001
Q ss_pred CCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 550 GYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 550 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..++++.+++. +||+.||++||++.|+++|
T Consensus 256 ~~~~~~~~li~---~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 256 TVTPEAKSLID---SMLTVNPKKRITADQALKV 285 (362)
T ss_dssp GSCHHHHHHHH---HHSCSSGGGSCCHHHHTTS
T ss_pred CCCHHHHHHHH---HHcCCChhhCcCHHHHhcC
Confidence 22345555555 9999999999999999876
No 98
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.1e-40 Score=341.66 Aligned_cols=257 Identities=23% Similarity=0.319 Sum_probs=200.0
Q ss_pred hcCCCCCeeeecCCceEEEEEeCC----CCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEe-CCeeEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPD----GSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVV-EEEKLL 396 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~----g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~-~~~~~l 396 (611)
..|...+.||+|+||.||+|+..+ ...||+|.++... ...+++.+|+.++++++||||+++++++.. ++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356677899999999999999643 2368999987533 234679999999999999999999999754 557899
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999999876667899999999999999999999 789999999999999999999999999999876432
Q ss_pred CC--CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCC-CHHHHHHHHhhcCChhhhhc---hhhcCCC
Q 035917 477 DE--SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKG-NLVDWVNQLSSSGRSKEAID---KALCGKG 550 (611)
Q Consensus 477 ~~--~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~-~~~~~~~~~~~~~~~~~~~~---~~l~~~~ 550 (611)
.. ........||+.|+|||.+.+..++.++||||||+++|||++|.. ++... ........+. .......
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 256 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----NTFDITVYLLQGRRLLQPEY 256 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS-----CTTTHHHHHHTTCCCCCCTT
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccC-----CHHHHHHHHhcCCCCCCCcc
Confidence 21 112233468889999999988899999999999999999999554 43210 0000000000 1111223
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
.++++.+++ .+||+.||++|||+.|+++.|+++.....
T Consensus 257 ~~~~l~~li---~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 257 CPDPLYEVM---LKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp CCHHHHHHH---HHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHH---HHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 344555544 49999999999999999999999988753
No 99
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-41 Score=355.22 Aligned_cols=248 Identities=20% Similarity=0.281 Sum_probs=192.1
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc---hhHHHHHHHHHHHhccCC--CCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRH--PNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H--~nIv~l~g~~~~~~~~~lv~ 398 (611)
+.|...+.||+|+||.||+|...+++.||||+++... ...+.+.+|+.++.+++| |||+++++++..++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 4577889999999999999999889999999986533 233678999999999986 99999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
| +.+|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++ ++.+||+|||+++.......
T Consensus 89 e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp C-CCSEEHHHHHHHS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred e-CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 9 4578999999865 46899999999999999999999 78999999999999997 57899999999987654333
Q ss_pred CccccCCCcccccccccccCC-----------CCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhc
Q 035917 479 SSFVNGDLGEFGYIAPEYSST-----------MVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALC 547 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~-----------~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 547 (611)
........||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ .....+++...
T Consensus 163 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~~~~~~~~ 239 (343)
T 3dbq_A 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDPNHE 239 (343)
T ss_dssp -------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCTTSC
T ss_pred cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHH---HHHHHhcCCcc
Confidence 223334579999999998754 6789999999999999999999998743111100 11112222111
Q ss_pred ---CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 035917 548 ---GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSL 583 (611)
Q Consensus 548 ---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 583 (611)
....++++.+++ .+||+.||++|||+.|+++|-
T Consensus 240 ~~~~~~~~~~l~~li---~~~L~~dp~~Rpt~~e~l~hp 275 (343)
T 3dbq_A 240 IEFPDIPEKDLQDVL---KCCLKRDPKQRISIPELLAHP 275 (343)
T ss_dssp CCCCCCSCHHHHHHH---HHHTCSSTTTSCCHHHHHTSH
T ss_pred cCCcccCCHHHHHHH---HHHcCCChhHCCCHHHHHhCc
Confidence 122334455544 499999999999999999874
No 100
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=1.8e-41 Score=353.21 Aligned_cols=258 Identities=19% Similarity=0.265 Sum_probs=204.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCC------CCEEEEEeccccc--hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCe
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPD------GSVLAVKRLNTCK--LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEE 393 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~------g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~ 393 (611)
.++|...+.||+|+||.||+|.... ++.||+|.++... ...+.+.+|+.+++++ +||||+++++++..++.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 4678888999999999999999532 3489999997543 2346799999999999 89999999999999999
Q ss_pred eEEEEeccCCCChHHhhhcC-------------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC
Q 035917 394 KLLIYKYMSSGTLYSLLQGN-------------ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF 460 (611)
Q Consensus 394 ~~lv~ey~~~gsL~~~l~~~-------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~ 460 (611)
.++||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+|+||||||+|||++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCCC
Confidence 99999999999999998642 135799999999999999999999 78999999999999999999
Q ss_pred CeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChh
Q 035917 461 DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSK 539 (611)
Q Consensus 461 ~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~ 539 (611)
.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |..||..... .....
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~~~~~ 277 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV----NSKFY 277 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS----SHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch----hHHHH
Confidence 999999999987644333223334457889999999988889999999999999999998 7777632100 00001
Q ss_pred hhhchhh---cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 540 EAIDKAL---CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 540 ~~~~~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
..+.... .....++++.+ ++.+||+.||++|||+.||+++|+++.++.
T Consensus 278 ~~~~~~~~~~~~~~~~~~l~~---li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 278 KLVKDGYQMAQPAFAPKNIYS---IMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp HHHHHTCCCCCCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCCCCCCHHHHH---HHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 1111111 11223444444 555999999999999999999999987764
No 101
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.7e-41 Score=358.09 Aligned_cols=250 Identities=19% Similarity=0.184 Sum_probs=191.5
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEecc
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~ 401 (611)
.++|...+.||+|+||.||+++.. +++.||||++.......+.+.+|+.++++++||||+++++++..++..++||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 98 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYA 98 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeC
Confidence 456888899999999999999965 7999999999766555677899999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC--eEEeecccccccCCCCCC
Q 035917 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD--ARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 402 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~--~kl~DFGla~~~~~~~~~ 479 (611)
++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+++......
T Consensus 99 ~~~~L~~~l~~~-~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~-- 172 (361)
T 3uc3_A 99 SGGELYERICNA-GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS-- 172 (361)
T ss_dssp CSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred CCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC--
Confidence 999999998654 35899999999999999999999 789999999999999987765 9999999998543221
Q ss_pred ccccCCCcccccccccccCCCCCCcc-cchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhc---CCCCHHHH
Q 035917 480 SFVNGDLGEFGYIAPEYSSTMVASLK-GDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALC---GKGYDEEI 555 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~~~~t~k-sDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~ 555 (611)
......||+.|+|||++.+..++.+ +|||||||++|||++|+.||...................... ....+.++
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 251 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPEC 251 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHH
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHH
Confidence 1223469999999999888777665 899999999999999998875321100000000111111110 11234555
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 556 LQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.+++. +||+.||++|||+.|+++|
T Consensus 252 ~~li~---~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 252 CHLIS---RIFVADPATRISIPEIKTH 275 (361)
T ss_dssp HHHHH---HHSCSCTTTSCCHHHHHTS
T ss_pred HHHHH---HHccCChhHCcCHHHHHhC
Confidence 55555 9999999999999999987
No 102
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=343.88 Aligned_cols=243 Identities=21% Similarity=0.283 Sum_probs=190.8
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch---------------------------hHHHHHHHHHHHhc
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL---------------------------GEKKFRNEMNRLGQ 375 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~---------------------------~~~~~~~Ev~~l~~ 375 (611)
++|...+.||+|+||.||+|+. .+++.||||++..... ..+++.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 4677889999999999999995 4689999999864321 12468899999999
Q ss_pred cCCCCccceeeEEEe--CCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCe
Q 035917 376 LRHPNLAPLLGYCVV--EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNV 453 (611)
Q Consensus 376 l~H~nIv~l~g~~~~--~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N 453 (611)
++||||+++++++.+ .+..++||||+++|+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+|
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~N 167 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL--KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSN 167 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHH
Confidence 999999999999987 5678999999999999887653 36999999999999999999999 7899999999999
Q ss_pred EEeCCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCC---CCcccchHHHHHHHHHHhCCCCCHHHH--
Q 035917 454 ILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMV---ASLKGDVYGIGVVLLELAGFKGNLVDW-- 528 (611)
Q Consensus 454 ILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~t~ksDV~SfGvvl~ell~~~~~~~~~-- 528 (611)
||++.++.+||+|||+++...... .......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||...
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred EEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 999999999999999998764322 1223456999999999987655 478899999999999999999886321
Q ss_pred ---HHHHhhcCChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 529 ---VNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 529 ---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
....... . .. .......++++.+++. +||+.||++|||+.|+++|
T Consensus 246 ~~~~~~~~~~-~----~~-~~~~~~~~~~l~~li~---~~l~~dp~~R~s~~e~l~h 293 (298)
T 2zv2_A 246 MCLHSKIKSQ-A----LE-FPDQPDIAEDLKDLIT---RMLDKNPESRIVVPEIKLH 293 (298)
T ss_dssp HHHHHHHHHC-C----CC-CCSSSCCCHHHHHHHH---HHTCSCTTTSCCHHHHTTC
T ss_pred HHHHHHHhcc-c----CC-CCCccccCHHHHHHHH---HHhhcChhhCCCHHHHhcC
Confidence 1111000 0 00 0011223455555555 9999999999999999875
No 103
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1e-41 Score=353.14 Aligned_cols=263 Identities=20% Similarity=0.291 Sum_probs=206.7
Q ss_pred HHHHHhhhcCCCCCeeeecCCceEEEEEeC------CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEE
Q 035917 317 ADLMAASNSFCSENVIISTRTGTTYKAMLP------DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYC 388 (611)
Q Consensus 317 ~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~~------~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~ 388 (611)
++.....++|...+.||+|+||.||+|+.. +++.||||.+.... ....++.+|+.++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 334445678888999999999999999853 37889999997543 2345789999999999999999999999
Q ss_pred EeCCeeEEEEeccCCCChHHhhhcCC---------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCC
Q 035917 389 VVEEEKLLIYKYMSSGTLYSLLQGNA---------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED 459 (611)
Q Consensus 389 ~~~~~~~lv~ey~~~gsL~~~l~~~~---------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~ 459 (611)
.+++..++||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCC
Confidence 99999999999999999999986421 35799999999999999999999 7899999999999999999
Q ss_pred CCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCCh
Q 035917 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRS 538 (611)
Q Consensus 460 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~ 538 (611)
+.+||+|||+++...............||+.|+|||.+.+..++.++|||||||++|||++ |..|+........ .
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~----~ 250 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV----L 250 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHH----H
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHH----H
Confidence 9999999999986643322222233457889999999988889999999999999999998 6777632110000 0
Q ss_pred hhhhchh--hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 539 KEAIDKA--LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 539 ~~~~~~~--l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
....... ......++++.+++. +||+.||++|||+.|++++|+++...
T Consensus 251 ~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 251 RFVMEGGLLDKPDNCPDMLFELMR---MCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHH---HHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 0000000 011223445555554 99999999999999999999987553
No 104
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=357.23 Aligned_cols=242 Identities=20% Similarity=0.309 Sum_probs=192.6
Q ss_pred CCCeeeecCCceEEEEEe-CCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccCCCC
Q 035917 328 SENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405 (611)
Q Consensus 328 ~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~~gs 405 (611)
..+.||+|+||.||+|+. .+|+.||+|+++... ...+++.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 356899999999999996 569999999997644 345679999999999999999999999999999999999999999
Q ss_pred hHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe--CCCCCeEEeecccccccCCCCCCcccc
Q 035917 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV--DEDFDARIMDFGLAKLMTSSDESSFVN 483 (611)
Q Consensus 406 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl--d~~~~~kl~DFGla~~~~~~~~~~~~~ 483 (611)
|.+++......+++..+..++.|+++||+||| +.+|+||||||+|||+ +.++.+||+|||+++....... ..
T Consensus 173 L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~---~~ 246 (373)
T 2x4f_A 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK---LK 246 (373)
T ss_dssp EHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB---CC
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc---cc
Confidence 99998765556999999999999999999999 7899999999999999 6778999999999987654322 22
Q ss_pred CCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhhcCChhhhhchhhcCCCCHHHHHHH
Q 035917 484 GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSSSGRSKEAIDKALCGKGYDEEILQF 558 (611)
Q Consensus 484 ~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 558 (611)
...||+.|+|||++.+..++.++|||||||++|||++|..||.. ........... .... .....++++.++
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~---~~~~-~~~~~~~~~~~l 322 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWD---LEDE-EFQDISEEAKEF 322 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC---SCSG-GGTTSCHHHHHH
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCC---CChh-hhccCCHHHHHH
Confidence 34699999999999988999999999999999999999988732 11111111000 0000 012234555665
Q ss_pred HHHHhhcccCCCCCCCCHHHHHHH
Q 035917 559 LKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 559 ~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+. +||+.||++|||+.|+++|
T Consensus 323 i~---~~L~~dp~~Rps~~e~l~h 343 (373)
T 2x4f_A 323 IS---KLLIKEKSWRISASEALKH 343 (373)
T ss_dssp HH---TTSCSSGGGSCCHHHHHHS
T ss_pred HH---HHcCCChhhCCCHHHHhcC
Confidence 55 9999999999999999986
No 105
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.6e-41 Score=376.62 Aligned_cols=258 Identities=22% Similarity=0.352 Sum_probs=206.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccC
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMS 402 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~ 402 (611)
.++|...+.||+|+||.||+|.+.++..||||+++......++|.+|+++|++++||||+++++++.+ +..++|||||+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~ 344 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 344 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSSCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCT
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCCCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhc
Confidence 45677788999999999999999888899999998766667889999999999999999999999865 67899999999
Q ss_pred CCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCcc
Q 035917 403 SGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481 (611)
Q Consensus 403 ~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~ 481 (611)
+|+|.+++.... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...... ...
T Consensus 345 ~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~ 420 (535)
T 2h8h_A 345 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTA 420 (535)
T ss_dssp TEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HHT
T ss_pred CCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-eec
Confidence 999999997532 35899999999999999999999 7899999999999999999999999999998764221 111
Q ss_pred ccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHHH
Q 035917 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLK 560 (611)
Q Consensus 482 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 560 (611)
.....++..|+|||.+.+..++.++|||||||++|||++ |+.||.......... .+...... ......++++.+
T Consensus 421 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~-~i~~~~~~-~~~~~~~~~l~~--- 495 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD-QVERGYRM-PCPPECPESLHD--- 495 (535)
T ss_dssp TCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHH-HHHTTCCC-CCCTTCCHHHHH---
T ss_pred ccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHHcCCCC-CCCCCCCHHHHH---
Confidence 223357889999999988899999999999999999999 777764311100000 00000000 011223444444
Q ss_pred HHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 561 VACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 561 l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
++.+||+.||++|||+.+|++.|+++....
T Consensus 496 li~~cl~~dP~~RPt~~~l~~~L~~~~~~~ 525 (535)
T 2h8h_A 496 LMCQCWRKEPEERPTFEYLQAFLEDYFTST 525 (535)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred HHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence 555999999999999999999999887654
No 106
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.6e-41 Score=346.04 Aligned_cols=255 Identities=17% Similarity=0.277 Sum_probs=197.6
Q ss_pred hcCCCCCeeeecCCceEEEEEeCC-C-------CEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCee
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPD-G-------SVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~-g-------~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~ 394 (611)
++|...+.||+|+||.||+|+... + ..||+|+++... ...+.+.+|+.++++++||||+++++++..++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 467778999999999999998543 3 579999996543 4457899999999999999999999999999999
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC--------eEEee
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD--------ARIMD 466 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~--------~kl~D 466 (611)
++||||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+|||++.++. +||+|
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 9999999999999999876556999999999999999999999 789999999999999998877 99999
Q ss_pred cccccccCCCCCCccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh
Q 035917 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA 545 (611)
Q Consensus 467 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (611)
||+++..... ....||+.|+|||.+.+ ..++.++|||||||++|||++|..++......... ........
T Consensus 165 fg~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~---~~~~~~~~ 235 (289)
T 4fvq_A 165 PGISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRK---LQFYEDRH 235 (289)
T ss_dssp CCSCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHH---HHHHHTTC
T ss_pred CcccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHH---HHHhhccC
Confidence 9999755321 11237889999999877 67899999999999999999965443211000000 00000011
Q ss_pred hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 546 LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 546 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
......++++.+++ .+||+.||++|||+.|++++|+++....+..
T Consensus 236 ~~~~~~~~~l~~li---~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~~ 280 (289)
T 4fvq_A 236 QLPAPKAAELANLI---NNCMDYEPDHRPSFRAIIRDLNSLFTPDLVP 280 (289)
T ss_dssp CCCCCSSCTTHHHH---HHHSCSSGGGSCCHHHHHHHHHTCC------
T ss_pred CCCCCCCHHHHHHH---HHHcCCChhHCcCHHHHHHHHHHhcCCCCCC
Confidence 11122233444544 4999999999999999999999988765433
No 107
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=5e-41 Score=358.27 Aligned_cols=248 Identities=20% Similarity=0.285 Sum_probs=193.5
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc---hhHHHHHHHHHHHhccC--CCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLR--HPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~--H~nIv~l~g~~~~~~~~~lv~ 398 (611)
..|...+.||+|+||.||+|...+++.||||++.... ...+.+.+|+.+|.+++ ||||+++++++..++..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 3588889999999999999998889999999996533 23467999999999996 599999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
| +.+|+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++ ++.+||+|||+++.+.....
T Consensus 136 E-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~ 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 209 (390)
T ss_dssp E-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-----
T ss_pred e-cCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc
Confidence 9 5678999999865 36899999999999999999999 88999999999999996 57999999999987654332
Q ss_pred CccccCCCcccccccccccCC-----------CCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhc
Q 035917 479 SSFVNGDLGEFGYIAPEYSST-----------MVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALC 547 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~-----------~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 547 (611)
.......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ......+++...
T Consensus 210 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~~~~~~~~~~~ 286 (390)
T 2zmd_A 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI---SKLHAIIDPNHE 286 (390)
T ss_dssp ----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH---HHHHHHHCTTSC
T ss_pred cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHH---HHHHHHhCcccc
Confidence 222344579999999998754 468999999999999999999999884321110 011122222211
Q ss_pred ---CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 035917 548 ---GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSL 583 (611)
Q Consensus 548 ---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 583 (611)
....++++.+++. +||+.||++|||+.|+++|-
T Consensus 287 ~~~~~~~~~~~~~li~---~~L~~dP~~Rps~~ell~hp 322 (390)
T 2zmd_A 287 IEFPDIPEKDLQDVLK---CCLKRDPKQRISIPELLAHP 322 (390)
T ss_dssp CCCCCCSCHHHHHHHH---HHTCSSTTTSCCHHHHHTSH
T ss_pred CCCCccchHHHHHHHH---HHcccChhhCCCHHHHhhCc
Confidence 1223445555544 99999999999999999873
No 108
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8.9e-41 Score=339.49 Aligned_cols=254 Identities=19% Similarity=0.223 Sum_probs=199.7
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCC----CCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPD----GSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~----g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
.++|...+.||+|+||.||+|+..+ +..||||.++... ...+++.+|+.++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4578888999999999999998543 3469999997542 345679999999999999999999999764 45789
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 99999999999999765556999999999999999999999 789999999999999999999999999999876433
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhch---hhcCCCCH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDK---ALCGKGYD 552 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~ 552 (611)
.. .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... ...+.+.. .......+
T Consensus 167 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 240 (281)
T 3cc6_A 167 DY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK-----DVIGVLEKGDRLPKPDLCP 240 (281)
T ss_dssp -------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG-----GHHHHHHHTCCCCCCTTCC
T ss_pred cc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH-----HHHHHHhcCCCCCCCCCCC
Confidence 21 11223357889999999988889999999999999999998 88887321000 00111110 01112234
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 553 EEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 553 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
+.+.+++. +||+.||++||++.|++++|+++.+.
T Consensus 241 ~~l~~li~---~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 241 PVLYTLMT---RCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp HHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHH---HHccCCchhCcCHHHHHHHHHHHHHh
Confidence 45555554 99999999999999999999998765
No 109
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=5.3e-41 Score=352.75 Aligned_cols=247 Identities=20% Similarity=0.246 Sum_probs=184.2
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
..+.|...+.||+|+||.||+|+.. +++.||||+++... ..+.+.+|++++++++||||+++++++..++..++||||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 3467888899999999999999975 58899999996542 346788999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC---CCCeEEeecccccccCCCC
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE---DFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~---~~~~kl~DFGla~~~~~~~ 477 (611)
+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||+++......
T Consensus 130 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 130 VTGGELFDRIVEK-GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp CCSCBHHHHHTTC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 9999999999754 45899999999999999999999 789999999999999975 8899999999998764322
Q ss_pred CCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh--h---cCCCCH
Q 035917 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA--L---CGKGYD 552 (611)
Q Consensus 478 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~--l---~~~~~~ 552 (611)
......||+.|+|||++.+..++.++|||||||++|||++|..||........ ....+.... . .....+
T Consensus 206 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---~~~~i~~~~~~~~~~~~~~~~ 279 (349)
T 2w4o_A 206 ---LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF---MFRRILNCEYYFISPWWDEVS 279 (349)
T ss_dssp ----------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH---HHHHHHTTCCCCCTTTTTTSC
T ss_pred ---ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH---HHHHHHhCCCccCCchhhhCC
Confidence 12234699999999999998999999999999999999999988732100000 000000000 0 012234
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 553 EEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 553 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.++.+++. +||+.||++|||+.|+++|
T Consensus 280 ~~~~~li~---~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 280 LNAKDLVR---KLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp HHHHHHHH---TTSCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 45555555 9999999999999999875
No 110
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.5e-41 Score=350.55 Aligned_cols=243 Identities=17% Similarity=0.287 Sum_probs=197.8
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch----hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL----GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+.+++.++||||+++++++..++..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4677889999999999999996 6789999999865321 2357899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+ +|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||+++++.+||+|||+++......
T Consensus 89 E~~-~g~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~- 162 (336)
T 3h4j_B 89 EYA-GGELFDYIVEK-KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN- 162 (336)
T ss_dssp CCC-CEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-
T ss_pred ECC-CCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-
Confidence 999 67999988654 35999999999999999999999 7899999999999999999999999999998764332
Q ss_pred CccccCCCcccccccccccCCCCC-CcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhch--hhcCCCCHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVA-SLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDK--ALCGKGYDEEI 555 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~ 555 (611)
.....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.+.... .....+.. ...+...+.++
T Consensus 163 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~-----~~~~~i~~~~~~~p~~~s~~~ 235 (336)
T 3h4j_B 163 --FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIP-----NLFKKVNSCVYVMPDFLSPGA 235 (336)
T ss_dssp --TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSST-----TCBCCCCSSCCCCCTTSCHHH
T ss_pred --ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHH-----HHHHHHHcCCCCCcccCCHHH
Confidence 2234569999999999988776 78999999999999999999987431000 00000100 01122344555
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 556 LQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.+++. +||+.||++|||+.|+++|
T Consensus 236 ~~li~---~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 236 QSLIR---RMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp HHHHH---TTSCSSGGGSCCHHHHTTC
T ss_pred HHHHH---HHcCCChhHCcCHHHHHhC
Confidence 55555 9999999999999999987
No 111
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.9e-41 Score=352.35 Aligned_cols=203 Identities=18% Similarity=0.232 Sum_probs=178.6
Q ss_pred ccHHHHHHhhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccC-----CCCccceeeE
Q 035917 314 VKLADLMAASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR-----HPNLAPLLGY 387 (611)
Q Consensus 314 ~~~~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~-----H~nIv~l~g~ 387 (611)
+++.+.....++|...+.||+|+||.||+|+. .+++.||||+++......+.+..|+.++++++ ||||++++++
T Consensus 25 ~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~ 104 (360)
T 3llt_A 25 FSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGK 104 (360)
T ss_dssp CCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred eeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccce
Confidence 44444445567899999999999999999996 57899999999866666677889999999996 9999999999
Q ss_pred EEeCCeeEEEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC--------
Q 035917 388 CVVEEEKLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE-------- 458 (611)
Q Consensus 388 ~~~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~-------- 458 (611)
+...+..++||||+ +++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.
T Consensus 105 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~~ 180 (360)
T 3llt_A 105 FMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSLI 180 (360)
T ss_dssp EEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEEE
T ss_pred eeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEcccccccccc
Confidence 99999999999999 889999997654 36999999999999999999999 789999999999999975
Q ss_pred -----------------CCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCC
Q 035917 459 -----------------DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGF 521 (611)
Q Consensus 459 -----------------~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~ 521 (611)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g 255 (360)
T 3llt_A 181 TVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH-----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255 (360)
T ss_dssp EEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC-----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHS
T ss_pred chhcccccccccccccCCCCEEEEeccCceecCCCC-----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHC
Confidence 7899999999998653321 234689999999999999999999999999999999999
Q ss_pred CCCH
Q 035917 522 KGNL 525 (611)
Q Consensus 522 ~~~~ 525 (611)
+.||
T Consensus 256 ~~pf 259 (360)
T 3llt_A 256 SLLF 259 (360)
T ss_dssp SCSC
T ss_pred CCCC
Confidence 8876
No 112
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=344.91 Aligned_cols=243 Identities=20% Similarity=0.251 Sum_probs=200.3
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+.. +|+.||+|+++... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56788899999999999999964 69999999996532 23467889999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 86 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~-- 159 (318)
T 1fot_A 86 DYIEGGELFSLLRKS-QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-- 159 (318)
T ss_dssp CCCCSCBHHHHHHHT-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC--
T ss_pred eCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCc--
Confidence 999999999999754 35899999999999999999999 889999999999999999999999999999876432
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cCCCCHHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CGKGYDEEILQ 557 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~ 557 (611)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+..... .+...++++.+
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~----~~~~i~~~~~~~p~~~~~~~~~ 232 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK----TYEKILNAELRFPPFFNEDVKD 232 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHHHCCCCCCTTSCHHHHH
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH----HHHHHHhCCCCCCCCCCHHHHH
Confidence 123469999999999999999999999999999999999998873210000 0001111111 12234556666
Q ss_pred HHHHHhhcccCCCCCCC-----CHHHHHHH
Q 035917 558 FLKVACNCVVSRPKDRW-----SMYQVYQS 582 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RP-----s~~evl~~ 582 (611)
+++ +|++.||++|| +++|+++|
T Consensus 233 li~---~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 233 LLS---RLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp HHH---HHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHH---HHhccCHHHcCCCcCCCHHHHhcC
Confidence 666 99999999999 89999876
No 113
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.5e-41 Score=362.16 Aligned_cols=254 Identities=16% Similarity=0.183 Sum_probs=204.7
Q ss_pred HHHHHHhhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch----hHHHHHHHHHHHhccCCCCccceeeEEEe
Q 035917 316 LADLMAASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL----GEKKFRNEMNRLGQLRHPNLAPLLGYCVV 390 (611)
Q Consensus 316 ~~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~ 390 (611)
+.++....++|...++||+|+||.||+|+.. +++.||+|+++.... ..+.+.+|+.++..++|||||++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3455566788999999999999999999965 589999999965321 22458899999999999999999999999
Q ss_pred CCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccc
Q 035917 391 EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470 (611)
Q Consensus 391 ~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla 470 (611)
++..++|||||++|+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~--~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a 215 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 215 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEecccee
Confidence 99999999999999999999754 4899999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCCccccCCCcccccccccccCCCC----CCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhch--
Q 035917 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMV----ASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDK-- 544 (611)
Q Consensus 471 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~-- 544 (611)
+...... .......+||+.|+|||++.+.. ++.++|||||||++|||++|+.||....... ....++..
T Consensus 216 ~~~~~~~-~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~----~~~~i~~~~~ 290 (410)
T 3v8s_A 216 MKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG----TYSKIMNHKN 290 (410)
T ss_dssp EECCTTS-EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH----HHHHHHTHHH
T ss_pred EeeccCC-cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh----HHHHHHhccc
Confidence 8764332 11223457999999999987654 7899999999999999999999874210000 00111111
Q ss_pred --hh-cCCCCHHHHHHHHHHHhhcccCCCCC--CCCHHHHHHH
Q 035917 545 --AL-CGKGYDEEILQFLKVACNCVVSRPKD--RWSMYQVYQS 582 (611)
Q Consensus 545 --~l-~~~~~~~~~~~l~~l~~~Cl~~dP~~--RPs~~evl~~ 582 (611)
.. .....++++.+++. +||+.+|++ ||+++||++|
T Consensus 291 ~~~~p~~~~~s~~~~~li~---~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 291 SLTFPDDNDISKEAKNLIC---AFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp HCCCCTTCCCCHHHHHHHH---HHSSCGGGCTTSSCHHHHHTS
T ss_pred cccCCCcccccHHHHHHHH---HHccChhhhCCCCCHHHHhcC
Confidence 01 11234566666666 999999988 9999999988
No 114
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.6e-41 Score=361.15 Aligned_cols=257 Identities=19% Similarity=0.179 Sum_probs=205.2
Q ss_pred ccHHHHHHhhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch----hHHHHHHHHHHHhccCCCCccceeeEE
Q 035917 314 VKLADLMAASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL----GEKKFRNEMNRLGQLRHPNLAPLLGYC 388 (611)
Q Consensus 314 ~~~~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~Ev~~l~~l~H~nIv~l~g~~ 388 (611)
+.+.+.....++|...++||+|+||.||+|+. .+|+.||||++++... ..+.+.+|+.++.+++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 44556666778999999999999999999997 4799999999965322 123488999999999999999999999
Q ss_pred EeCCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecc
Q 035917 389 VVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468 (611)
Q Consensus 389 ~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFG 468 (611)
.+.+..++||||+++|+|.+++......+++..+..++.+|+.||+||| +.+|+||||||+|||++.++.+||+|||
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFG 207 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFG 207 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeech
Confidence 9999999999999999999999765446999999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCcccccccccccC-------CCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhh
Q 035917 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSS-------TMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEA 541 (611)
Q Consensus 469 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~ 541 (611)
+++....... ......+||+.|+|||++. ...++.++|||||||++|||++|+.||........ ...+
T Consensus 208 la~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~----~~~i 282 (412)
T 2vd5_A 208 SCLKLRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET----YGKI 282 (412)
T ss_dssp TCEECCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHH
T ss_pred hheeccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHH----HHHH
Confidence 9987643322 1223457999999999886 45689999999999999999999998742110000 0011
Q ss_pred hc------hhhcCCCCHHHHHHHHHHHhhcccCCCCCC---CCHHHHHHH
Q 035917 542 ID------KALCGKGYDEEILQFLKVACNCVVSRPKDR---WSMYQVYQS 582 (611)
Q Consensus 542 ~~------~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~R---Ps~~evl~~ 582 (611)
+. ........++++.++++ +||+ +|++| |+++||++|
T Consensus 283 ~~~~~~~~~p~~~~~~s~~~~dli~---~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 283 VHYKEHLSLPLVDEGVPEEARDFIQ---RLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp HTHHHHCCCC----CCCHHHHHHHH---TTSS-CGGGCTTTTTHHHHHTS
T ss_pred HhcccCcCCCccccCCCHHHHHHHH---HHcC-ChhhcCCCCCHHHHhcC
Confidence 11 00011234566666666 9999 99998 599999887
No 115
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=374.07 Aligned_cols=251 Identities=20% Similarity=0.290 Sum_probs=197.6
Q ss_pred eeeecCCceEEEEEeC---CCCEEEEEecccc--chhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccCCCC
Q 035917 331 VIISTRTGTTYKAMLP---DGSVLAVKRLNTC--KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSSGT 405 (611)
Q Consensus 331 ~ig~G~~g~Vy~~~~~---~g~~vAvK~~~~~--~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~~gs 405 (611)
.||+|+||.||+|.+. ++..||||+++.. ....++|.+|+++|++++|||||+++++|.. +..++|||||++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999863 4678999999753 2346789999999999999999999999976 56899999999999
Q ss_pred hHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC-CccccC
Q 035917 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE-SSFVNG 484 (611)
Q Consensus 406 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~-~~~~~~ 484 (611)
|.+++......+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+..... ......
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~ 498 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA 498 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence 99999866667999999999999999999999 78999999999999999999999999999987643321 111122
Q ss_pred CCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhh---cCCCCHHHHHHHHH
Q 035917 485 DLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKAL---CGKGYDEEILQFLK 560 (611)
Q Consensus 485 ~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~l~~ 560 (611)
..+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ...+.+.... .....++++.+
T Consensus 499 ~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~~~~i~~~~~~~~p~~~~~~l~~--- 570 (613)
T 2ozo_A 499 GKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-----EVMAFIEQGKRMECPPECPPELYA--- 570 (613)
T ss_dssp ---CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-----HHHHHHHTTCCCCCCTTCCHHHHH---
T ss_pred CCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-----HHHHHHHcCCCCCCCCcCCHHHHH---
Confidence 346789999999988899999999999999999998 88887431110 0111111111 11223344444
Q ss_pred HHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 561 VACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 561 l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
++.+||+.||++||++.+|++.|+.+.......
T Consensus 571 li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~~ 603 (613)
T 2ozo_A 571 LMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK 603 (613)
T ss_dssp HHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHcCCChhHCcCHHHHHHHHHHHHHHhccc
Confidence 555999999999999999999999988776543
No 116
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-40 Score=354.84 Aligned_cols=247 Identities=21% Similarity=0.295 Sum_probs=201.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
.+.|...+.||+|+||.||+|... +|+.||+|++.... .....+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 457888899999999999999964 68999999996543 3446789999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC--CCCeEEeecccccccCCCCC
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE--DFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~--~~~~kl~DFGla~~~~~~~~ 478 (611)
+++|+|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||++. ++.+||+|||+++.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999999866557999999999999999999999 789999999999999974 57899999999987654322
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCCCCHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGKGYDE 553 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~ 553 (611)
.....||+.|+|||++.+..++.++|||||||++|||++|..||... ......... ..++. .....++
T Consensus 207 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~---~~~~~-~~~~~s~ 279 (387)
T 1kob_A 207 ---VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW---EFDED-AFSSVSP 279 (387)
T ss_dssp ---EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC---CCCSS-TTTTSCH
T ss_pred ---eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---CCCcc-ccccCCH
Confidence 12235999999999999989999999999999999999999887321 111111000 00000 0122345
Q ss_pred HHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 554 EILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 554 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++.+++. +||+.||++|||+.|+++|
T Consensus 280 ~~~~li~---~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 280 EAKDFIK---NLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp HHHHHHH---TTSCSSGGGSCCHHHHHTS
T ss_pred HHHHHHH---HHcCCChhHCcCHHHHhhC
Confidence 5555555 9999999999999999986
No 117
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=354.01 Aligned_cols=244 Identities=23% Similarity=0.262 Sum_probs=197.4
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 46788899999999999999964 58999999986532 23467899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.+....
T Consensus 95 e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 169 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQN-VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET- 169 (384)
T ss_dssp CCCTTEEHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC-
Confidence 999999999999854 46999999999999999999999 7899999999999999999999999999998764332
Q ss_pred CccccCCCcccccccccccCC---CCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhch-----hhcCCC
Q 035917 479 SSFVNGDLGEFGYIAPEYSST---MVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDK-----ALCGKG 550 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~~~ 550 (611)
.....+||+.|+|||++.. ..++.++|||||||++|||++|+.||... ......+.+.. ...+..
T Consensus 170 --~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~-----~~~~~~~~~~~~~~~~~~~p~~ 242 (384)
T 4fr4_A 170 --QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR-----SSTSSKEIVHTFETTVVTYPSA 242 (384)
T ss_dssp --CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC-----TTSCHHHHHHHHHHCCCCCCTT
T ss_pred --ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC-----CCccHHHHHHHHhhcccCCCCc
Confidence 2234579999999999864 45899999999999999999999887310 00001111100 011223
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCC-HHHHHHH
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWS-MYQVYQS 582 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~ 582 (611)
.+.++..++. +||+.||++||+ +++|.+|
T Consensus 243 ~s~~~~~li~---~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 243 WSQEMVSLLK---KLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp SCHHHHHHHH---HHSCSSGGGSCCSHHHHHTS
T ss_pred CCHHHHHHHH---HHhcCCHhHhcccHHHHHcC
Confidence 4455555555 999999999998 7777654
No 118
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=6.7e-41 Score=351.82 Aligned_cols=241 Identities=25% Similarity=0.333 Sum_probs=197.4
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
+.|...+.||+|+||.||+|+. .+|+.||||++.... ...+++.+|++++++++||||+++++++..++..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4577888999999999999995 679999999996432 22357899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+. |+|.+++......+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 134 e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~-- 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 207 (348)
T ss_dssp ECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB--
T ss_pred ecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC--
Confidence 9997 6898888655557999999999999999999999 789999999999999999999999999999865421
Q ss_pred CccccCCCcccccccccccC---CCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCCC
Q 035917 479 SSFVNGDLGEFGYIAPEYSS---TMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGKG 550 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~ 550 (611)
....||+.|+|||++. ...++.++|||||||++|||++|+.||... ....... ..+......
T Consensus 208 ----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~ 277 (348)
T 1u5q_A 208 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN------ESPALQSGH 277 (348)
T ss_dssp ----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS------CCCCCCCTT
T ss_pred ----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc------CCCCCCCCC
Confidence 2346999999999873 567899999999999999999999886421 1111111 111222234
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSMYQVYQSL 583 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 583 (611)
.++++.++++ +||+.||++|||+.+++++.
T Consensus 278 ~~~~l~~li~---~~l~~dP~~Rps~~~ll~h~ 307 (348)
T 1u5q_A 278 WSEYFRNFVD---SCLQKIPQDRPTSEVLLKHR 307 (348)
T ss_dssp SCHHHHHHHH---HHTCSSGGGSCCHHHHTTCH
T ss_pred CCHHHHHHHH---HHcccChhhCcCHHHHhhCh
Confidence 4556666655 99999999999999998764
No 119
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.8e-41 Score=350.11 Aligned_cols=257 Identities=19% Similarity=0.250 Sum_probs=199.4
Q ss_pred hhcCCCCCeeeecCCceEEEEEe------CCCCEEEEEecccc--chhHHHHHHHHHHHhccCCCCccceeeEEEeCCee
Q 035917 323 SNSFCSENVIISTRTGTTYKAML------PDGSVLAVKRLNTC--KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~------~~g~~vAvK~~~~~--~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~ 394 (611)
.++|...+.||+|+||.||+|+. .+++.||||++... .....++.+|+.++++++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35788889999999999999984 35779999999643 23456799999999999999999999999999999
Q ss_pred EEEEeccCCCChHHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC---CCCeEEe
Q 035917 395 LLIYKYMSSGTLYSLLQGNA------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE---DFDARIM 465 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~---~~~~kl~ 465 (611)
++||||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+|||++. +..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 99999999999999997543 34899999999999999999999 789999999999999984 4569999
Q ss_pred ecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHH----HHhhcCChhh
Q 035917 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVN----QLSSSGRSKE 540 (611)
Q Consensus 466 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~----~~~~~~~~~~ 540 (611)
|||+++...............||+.|+|||.+.+..++.++||||||+++|||++ |..||..... .......
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--- 262 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG--- 262 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC---
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCC---
Confidence 9999986543322222223357899999999988889999999999999999998 7777632110 0000000
Q ss_pred hhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 541 AIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 541 ~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
.. ......+.++.+ ++.+||+.||++||++.|++++|+.+.+...
T Consensus 263 --~~-~~~~~~~~~l~~---li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 263 --RM-DPPKNCPGPVYR---IMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp --CC-CCCTTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred --CC-CCCCCCCHHHHH---HHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 00 011223444555 4459999999999999999999999887643
No 120
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2.2e-40 Score=338.42 Aligned_cols=264 Identities=17% Similarity=0.211 Sum_probs=204.1
Q ss_pred hhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEE-EeCCeeEEEEe
Q 035917 322 ASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYC-VVEEEKLLIYK 399 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~-~~~~~~~lv~e 399 (611)
..++|...+.||+|+||.||+|+. .+++.||||++.... ..+++.+|+.++.+++|++++..++++ ...+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEE
Confidence 456889999999999999999995 678999999875432 224588999999999998888777766 55677899999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe---CCCCCeEEeecccccccCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV---DEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---d~~~~~kl~DFGla~~~~~~ 476 (611)
|+ +|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 86 LL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp CC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred cc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 99 89999999865557999999999999999999999 7899999999999999 78899999999999876543
Q ss_pred CCC-----ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-----
Q 035917 477 DES-----SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL----- 546 (611)
Q Consensus 477 ~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l----- 546 (611)
... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ..............
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAA-TKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCS-SSSSHHHHHHHHHHHSCHH
T ss_pred ccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchh-hhhhhhhhhhcccccchhh
Confidence 221 1123456999999999999999999999999999999999999887421000 00000011111111
Q ss_pred -cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCCC
Q 035917 547 -CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFSE 594 (611)
Q Consensus 547 -~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (611)
.....++++.++++ +||+.||++|||+.+|++.|+++.++.+...
T Consensus 241 ~~~~~~~~~l~~li~---~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~ 286 (296)
T 4hgt_A 241 VLCKGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp HHTTTSCHHHHHHHH---HHHTSCTTCCCCHHHHHHHHHHHHHHHTCCT
T ss_pred hhhccCCHHHHHHHH---HHHhcCCCCCCCHHHHHHHHHHHHHHhCCCc
Confidence 11223445555555 9999999999999999999999999987654
No 121
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.7e-40 Score=353.90 Aligned_cols=251 Identities=16% Similarity=0.192 Sum_probs=198.2
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchh----HHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLG----EKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~----~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~l 396 (611)
.++|...++||+|+||.||+|+.. +++.||||+++..... .+.+.+|..++.++ +|||||++++++.+++..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357888899999999999999965 5889999999754322 24578999999887 89999999999999999999
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 131 V~E~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEcCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999998754 35999999999999999999999 789999999999999999999999999999863322
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHh-hcCCh----hhhhchh-hcCCC
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLS-SSGRS----KEAIDKA-LCGKG 550 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~-~~~~~----~~~~~~~-l~~~~ 550 (611)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... ..+.... ..+..
T Consensus 207 ~--~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~ 284 (396)
T 4dc2_A 207 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS 284 (396)
T ss_dssp T--CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCTT
T ss_pred C--CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCCc
Confidence 2 123345799999999999999999999999999999999999999831100000 00000 0011111 11223
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCH------HHHHHH
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSM------YQVYQS 582 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~ 582 (611)
.+.++.++++ +||+.||++||++ .||++|
T Consensus 285 ~s~~~~~li~---~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 285 LSVKAASVLK---SFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp SCHHHHHHHH---HHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred CCHHHHHHHH---HHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 4555666555 9999999999985 677776
No 122
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.7e-40 Score=353.91 Aligned_cols=201 Identities=18% Similarity=0.239 Sum_probs=173.6
Q ss_pred hhcCCCCCeeeec--CCceEEEEEeC-CCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 323 SNSFCSENVIIST--RTGTTYKAMLP-DGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G--~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
.++|...+.||+| +||.||+|+.. +|+.||||+++... ...+.+.+|+.++++++|||||++++++..++..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4567788999999 99999999965 79999999996543 223668899999999999999999999999999999
Q ss_pred EEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 397 IYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
|||||++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999997653 46999999999999999999999 78999999999999999999999999999875432
Q ss_pred CCC-----CccccCCCcccccccccccCC--CCCCcccchHHHHHHHHHHhCCCCCHH
Q 035917 476 SDE-----SSFVNGDLGEFGYIAPEYSST--MVASLKGDVYGIGVVLLELAGFKGNLV 526 (611)
Q Consensus 476 ~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~SfGvvl~ell~~~~~~~ 526 (611)
... ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~ 238 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK 238 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence 211 111122468999999999887 678999999999999999999998874
No 123
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=351.03 Aligned_cols=247 Identities=18% Similarity=0.205 Sum_probs=196.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~l 396 (611)
.++|...++||+|+||.||+|+.. +|+.||||+++... ...+.+.+|..++..+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 357888899999999999999964 68999999996532 2345688999999988 69999999999999999999
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 102 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS-RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 99999999999999754 35899999999999999999999 789999999999999999999999999999864322
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEI 555 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~ 555 (611)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... ..+...++++
T Consensus 178 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~~~~~p~~~~~~~ 251 (353)
T 3txo_A 178 G--VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL----FEAILNDEVVYPTWLHEDA 251 (353)
T ss_dssp ----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCTTSCHHH
T ss_pred C--ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCCCCCCCCHHH
Confidence 2 122345799999999999888899999999999999999999988732110000 00111111 1122345556
Q ss_pred HHHHHHHhhcccCCCCCCCCH------HHHHHH
Q 035917 556 LQFLKVACNCVVSRPKDRWSM------YQVYQS 582 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~------~evl~~ 582 (611)
.++++ +||+.||++||++ .|+++|
T Consensus 252 ~~li~---~lL~~dP~~R~~~~~~~~~~~il~h 281 (353)
T 3txo_A 252 TGILK---SFMTKNPTMRLGSLTQGGEHAILRH 281 (353)
T ss_dssp HHHHH---HHTCSSGGGSTTSGGGTCTHHHHTS
T ss_pred HHHHH---HHhhhCHHHccCCcccCCHHHHhhC
Confidence 66555 9999999999998 888876
No 124
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.1e-39 Score=340.62 Aligned_cols=267 Identities=22% Similarity=0.326 Sum_probs=205.3
Q ss_pred HHhhhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhc--cCCCCccceeeEEEeCC----e
Q 035917 320 MAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQ--LRHPNLAPLLGYCVVEE----E 393 (611)
Q Consensus 320 ~~~t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~--l~H~nIv~l~g~~~~~~----~ 393 (611)
....++|...+.||+|+||.||+|+. +|+.||||+++.. ..+.+.+|++++.. ++||||+++++++...+ .
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~--~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch--hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 34567899999999999999999998 5899999999643 34567888888887 78999999999998876 7
Q ss_pred eEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC-----CCCeeecCCCCCeEEeCCCCCeEEeecc
Q 035917 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGC-----QPPFLHQNICSNVILVDEDFDARIMDFG 468 (611)
Q Consensus 394 ~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlkp~NILld~~~~~kl~DFG 468 (611)
.++||||+++|+|.+++... .+++..++.++.|++.||+|||... +.+|+||||||+|||++.++.+||+|||
T Consensus 115 ~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNRY--TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp EEEEECCCTTCBHHHHHHHC--CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCT
T ss_pred eEEEEeecCCCcHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECC
Confidence 89999999999999999754 5899999999999999999999321 4689999999999999999999999999
Q ss_pred cccccCCCCCCc--cccCCCcccccccccccCCC------CCCcccchHHHHHHHHHHhCC----------CCCHHHHHH
Q 035917 469 LAKLMTSSDESS--FVNGDLGEFGYIAPEYSSTM------VASLKGDVYGIGVVLLELAGF----------KGNLVDWVN 530 (611)
Q Consensus 469 la~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~t~ksDV~SfGvvl~ell~~----------~~~~~~~~~ 530 (611)
+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| ..||.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~ 272 (342)
T 1b6c_B 193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 272 (342)
T ss_dssp TCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc
Confidence 998765433211 12344699999999998765 234789999999999999998 555532100
Q ss_pred HHhhcCChhh-hhchhhcCCC-----CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 531 QLSSSGRSKE-AIDKALCGKG-----YDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 531 ~~~~~~~~~~-~~~~~l~~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
.........+ .......... ..+....+.+++.+||+.||++|||+.||+++|+++.++.+
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 273 SDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC
T ss_pred CcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhc
Confidence 0000000000 0011111111 12344566677779999999999999999999999988764
No 125
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.5e-40 Score=341.45 Aligned_cols=261 Identities=17% Similarity=0.224 Sum_probs=195.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch----hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL----GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
.++|...+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|+.++++++||||+++++++..++..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 357888899999999999999964 689999999965432 236789999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
|||+++++|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 113 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ-GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EECCCCEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEecCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 9999999999999754 35899999999999999999999 7899999999999999999999999999998764322
Q ss_pred CCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHH
Q 035917 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQ 557 (611)
Q Consensus 478 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 557 (611)
. .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..................+.......+.++.+
T Consensus 189 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (309)
T 2h34_A 189 L-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAFDA 267 (309)
T ss_dssp ---------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHSCCCCGGGTSTTCCTHHHH
T ss_pred c-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhccCCCCccccCCCCCHHHHH
Confidence 1 122334689999999999998999999999999999999999988742111100000000000111112233445555
Q ss_pred HHHHHhhcccCCCCCCC-CHHHHHHHHHHchhhhC
Q 035917 558 FLKVACNCVVSRPKDRW-SMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RP-s~~evl~~L~~i~~~~~ 591 (611)
++. +||+.||++|| +++++++.|+.+.....
T Consensus 268 li~---~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 268 VIA---RGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp HHH---HHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred HHH---HhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 555 99999999999 99999999998776643
No 126
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=336.06 Aligned_cols=247 Identities=19% Similarity=0.266 Sum_probs=180.1
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch----hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL----GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~----~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688889999999999999996 5799999999965322 2367899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++++|.+++......+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 167 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE 167 (278)
T ss_dssp ECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC----
T ss_pred ecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC
Confidence 999999999999876567999999999999999999999 78999999999999999999999999999987643221
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEILQ 557 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~ 557 (611)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ........... ......+.++.+
T Consensus 168 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 241 (278)
T 3cok_A 168 --KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTV----KNTLNKVVLADYEMPSFLSIEAKD 241 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSC----C-----CCSSCCCCCTTSCHHHHH
T ss_pred --cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhH----HHHHHHHhhcccCCccccCHHHHH
Confidence 11234589999999999988899999999999999999999888632100 00000010000 011223455555
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 558 FLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++. +||+.||++|||+.++++|
T Consensus 242 li~---~~l~~dp~~Rps~~~~l~h 263 (278)
T 3cok_A 242 LIH---QLLRRNPADRLSLSSVLDH 263 (278)
T ss_dssp HHH---HHSCSSGGGSCCHHHHTTS
T ss_pred HHH---HHcccCHhhCCCHHHHhcC
Confidence 555 9999999999999999875
No 127
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.3e-40 Score=339.28 Aligned_cols=263 Identities=20% Similarity=0.296 Sum_probs=197.2
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEecccc----chhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTC----KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
.++|...+.||+|+||.||+|.. .+|+.||||+++.. ....+++.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35788889999999999999995 57999999998642 22346789999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 398 YKYMSSGTLYSLLQG---NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
|||+++|+|.+++.. ....+++..++.++.+++.||.||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999998863 2346899999999999999999999 7899999999999999999999999999998664
Q ss_pred CCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhh-cCChhhhhchhhcCCCCHH
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSS-SGRSKEAIDKALCGKGYDE 553 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~ 553 (611)
.... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||......... .........+.......++
T Consensus 188 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (310)
T 2wqm_A 188 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSE 265 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCH
T ss_pred CCCc--cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCH
Confidence 3221 122346899999999999889999999999999999999999887431100000 0000000001111223445
Q ss_pred HHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 554 EILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 554 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
++.+++. +||+.||++|||+.+|+++|+++......+
T Consensus 266 ~l~~li~---~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 266 ELRQLVN---MCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp HHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHH---HHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 5555555 999999999999999999999998886533
No 128
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=345.89 Aligned_cols=261 Identities=22% Similarity=0.315 Sum_probs=204.8
Q ss_pred hcCCCCCeeeecCCceEEEEEe-----CCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCC--eeE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-----PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE--EKL 395 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-----~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~--~~~ 395 (611)
++|...+.||+|+||.||+|++ .+++.||||++.... ...+.+.+|++++++++||||+++++++...+ ..+
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4577788999999999999984 468999999997643 34467999999999999999999999987654 679
Q ss_pred EEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
+||||+++|+|.+++......+++..++.++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 999999999999999876567999999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCCc-cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHH---HhhcCC--------hhhhhc
Q 035917 476 SDESS-FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQ---LSSSGR--------SKEAID 543 (611)
Q Consensus 476 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~---~~~~~~--------~~~~~~ 543 (611)
..... ......++..|+|||.+.+..++.++||||||+++|||++|..|+...... ...... ..+.+.
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK 277 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH
T ss_pred cccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh
Confidence 33211 122335788899999998888999999999999999999998765322111 111100 011111
Q ss_pred hhh---cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 544 KAL---CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 544 ~~l---~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
... .....++++.+ ++.+||+.||++|||+.|+++.|+++.++.
T Consensus 278 ~~~~~~~~~~~~~~l~~---li~~cl~~dP~~Rps~~el~~~L~~l~~~l 324 (326)
T 2w1i_A 278 NNGRLPRPDGCPDEIYM---IMTECWNNNVNQRPSFRDLALRVDQIRDQM 324 (326)
T ss_dssp TTCCCCCCTTCCHHHHH---HHHHHSCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCcccHHHHH---HHHHHcCCChhhCcCHHHHHHHHHHHHHHh
Confidence 111 11223344555 555999999999999999999999998763
No 129
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.6e-40 Score=336.16 Aligned_cols=250 Identities=20% Similarity=0.243 Sum_probs=198.7
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
.++|...+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 457888899999999999999965 78999999986433 335779999999999999999999999999999999999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~ 479 (611)
|+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 161 (276)
T 2yex_A 86 YCSGGELFDRIEPD-IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (276)
T ss_dssp CCTTEEGGGGSBTT-TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred ecCCCcHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch
Confidence 99999999998754 45899999999999999999999 789999999999999999999999999999876433222
Q ss_pred ccccCCCcccccccccccCCCCC-CcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh---cCCCCHHHH
Q 035917 480 SFVNGDLGEFGYIAPEYSSTMVA-SLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL---CGKGYDEEI 555 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~ 555 (611)
.......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||....... ........... .....++++
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 238 (276)
T 2yex_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC---QEYSDWKEKKTYLNPWKKIDSAP 238 (276)
T ss_dssp CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS---HHHHHHHTTCTTSTTGGGSCHHH
T ss_pred hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH---HHHHHhhhcccccCchhhcCHHH
Confidence 22334569999999999987665 788999999999999999988863210000 00000000000 001233445
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 556 LQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.++++ +||+.||++|||+.|++++
T Consensus 239 ~~li~---~~l~~~p~~Rps~~~il~~ 262 (276)
T 2yex_A 239 LALLH---KILVENPSARITIPDIKKD 262 (276)
T ss_dssp HHHHH---HHSCSSTTTSCCHHHHTTC
T ss_pred HHHHH---HHCCCCchhCCCHHHHhcC
Confidence 55554 9999999999999999875
No 130
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-40 Score=338.68 Aligned_cols=249 Identities=19% Similarity=0.228 Sum_probs=191.5
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
+.|...+.||+|+||.||+|+. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 4677889999999999999996 468999999986543 3457899999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe---CCCCCeEEeecccccccC
Q 035917 401 MSSGTLYSLLQGN---ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV---DEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 401 ~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---d~~~~~kl~DFGla~~~~ 474 (611)
+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 9999999988532 246999999999999999999999 7899999999999999 456789999999998764
Q ss_pred CCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHH
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEE 554 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 554 (611)
.... .....||+.|+|||.+. ..++.++|||||||++|||++|+.||..........................+++
T Consensus 179 ~~~~---~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (285)
T 3is5_A 179 SDEH---STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQ 254 (285)
T ss_dssp -----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHH
T ss_pred Cccc---CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHH
Confidence 3321 22346899999999886 4689999999999999999999988732110000000000000000111123445
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 555 ILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+.+++. +||+.||++|||+.|++++
T Consensus 255 ~~~li~---~~L~~dP~~Rps~~e~l~h 279 (285)
T 3is5_A 255 AVDLLK---QMLTKDPERRPSAAQVLHH 279 (285)
T ss_dssp HHHHHH---HHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHH---HHccCChhhCcCHHHHhcC
Confidence 555554 9999999999999999875
No 131
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-40 Score=346.52 Aligned_cols=241 Identities=19% Similarity=0.260 Sum_probs=200.0
Q ss_pred hhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch---------hHHHHHHHHHHHhccCCCCccceeeEEEeC
Q 035917 322 ASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL---------GEKKFRNEMNRLGQLRHPNLAPLLGYCVVE 391 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~---------~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~ 391 (611)
..++|...+.||+|+||.||+|+. .+++.||||+++.... ..+.+.+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456788899999999999999995 5789999999965431 223578899999999999999999999999
Q ss_pred CeeEEEEeccCCC-ChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccc
Q 035917 392 EEKLLIYKYMSSG-TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470 (611)
Q Consensus 392 ~~~~lv~ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla 470 (611)
+..++||||+.+| +|.+++... ..+++..+..++.|++.||.||| ..+|+||||||+|||++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a 177 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRH-PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSA 177 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred CEEEEEEEeCCCCccHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccc
Confidence 9999999999877 999999755 35999999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCCccccCCCcccccccccccCCCCC-CcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cC
Q 035917 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVA-SLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CG 548 (611)
Q Consensus 471 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~ 548 (611)
+........ ....||+.|+|||++.+..+ +.++|||||||++|||++|+.||... .+...... ..
T Consensus 178 ~~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~----------~~~~~~~~~~~ 244 (335)
T 3dls_A 178 AYLERGKLF---YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL----------EETVEAAIHPP 244 (335)
T ss_dssp EECCTTCCB---CEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSG----------GGGTTTCCCCS
T ss_pred eECCCCCce---eccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhH----------HHHHhhccCCC
Confidence 876543321 22359999999999988776 78999999999999999999987431 11111111 12
Q ss_pred CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 549 KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 549 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
...++++.+++. +||+.||++|||+.|++++
T Consensus 245 ~~~~~~l~~li~---~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 245 YLVSKELMSLVS---GLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp SCCCHHHHHHHH---HHTCSSGGGSCCHHHHHHC
T ss_pred cccCHHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 234555666555 9999999999999999987
No 132
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.7e-40 Score=343.95 Aligned_cols=250 Identities=19% Similarity=0.267 Sum_probs=182.7
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
.++|...+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|++++++++||||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 46788889999999999999995 468999999986432 234678899999999999999999999999999999999
Q ss_pred ccCCCChHHhhhcCC-----CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 400 YMSSGTLYSLLQGNA-----TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 400 y~~~gsL~~~l~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
|++ |+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 59999885321 35899999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCCccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhh-cCC----------
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSS-SGR---------- 537 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~-~~~---------- 537 (611)
.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.. ....... .+.
T Consensus 160 ~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IPVN--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SCCC--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred CCcc--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 3221 1233468999999999876 4689999999999999999999987631 1111100 000
Q ss_pred ----------------hhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 538 ----------------SKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 538 ----------------~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..+.+.+. .....+.++.+++ .+||+.||++|||+.|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li---~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPH-TKEPLDGNLMDFL---HGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGG-CSSCCCHHHHHHH---HHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhccc-ccccCCHHHHHHH---HHHCCCCcccCCCHHHHhCC
Confidence 00000000 0112334444544 49999999999999999876
No 133
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.6e-40 Score=341.93 Aligned_cols=259 Identities=19% Similarity=0.264 Sum_probs=200.5
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEe----CCeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVV----EEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~----~~~~~l 396 (611)
.++|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++||||+++++++.. ....++
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 35788889999999999999996 679999999986433 345679999999999999999999999973 346789
Q ss_pred EEeccCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeeccccccc
Q 035917 397 IYKYMSSGTLYSLLQG---NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~ 473 (611)
||||+++|+|.+++.. ....+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999998865 2356999999999999999999999 789999999999999999999999999998765
Q ss_pred CCCCCCc-------cccCCCcccccccccccCCCC---CCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhc
Q 035917 474 TSSDESS-------FVNGDLGEFGYIAPEYSSTMV---ASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID 543 (611)
Q Consensus 474 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~ 543 (611)
....... ......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||...... .......+.
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~ 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK---GDSVALAVQ 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT---TSCHHHHHH
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc---cchhhHHhh
Confidence 3211000 011224799999999987544 689999999999999999999998543211 111111111
Q ss_pred hhhc---CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 544 KALC---GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 544 ~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
.... ....+.++.+++. +||+.||++|||+.|++++|+.+....
T Consensus 262 ~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 262 NQLSIPQSPRHSSALWQLLN---SMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp CC--CCCCTTSCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred ccCCCCccccCCHHHHHHHH---HHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 1111 1223445555554 999999999999999999999886543
No 134
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.8e-40 Score=343.26 Aligned_cols=250 Identities=17% Similarity=0.196 Sum_probs=197.7
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~lv 397 (611)
++|...+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+.++.++ +||||+++++++.+.+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46778899999999999999964 68999999996532 2235688999999988 899999999999999999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 89 ~e~~~gg~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 9999999999998754 35899999999999999999999 7899999999999999999999999999998643222
Q ss_pred CCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHh-hcCCh----hhhhchhh-cCCCC
Q 035917 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLS-SSGRS----KEAIDKAL-CGKGY 551 (611)
Q Consensus 478 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~-~~~~~----~~~~~~~l-~~~~~ 551 (611)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... ..+..... .+...
T Consensus 165 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~ 242 (345)
T 3a8x_A 165 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL 242 (345)
T ss_dssp --CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCTTS
T ss_pred --CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCCCC
Confidence 122345799999999999998999999999999999999999998732000000 00000 00111111 12234
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCH------HHHHHH
Q 035917 552 DEEILQFLKVACNCVVSRPKDRWSM------YQVYQS 582 (611)
Q Consensus 552 ~~~~~~l~~l~~~Cl~~dP~~RPs~------~evl~~ 582 (611)
+.++.++++ +||+.||++||++ .|+++|
T Consensus 243 s~~~~~li~---~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 243 SVKAASVLK---SFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp CHHHHHHHH---HHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred CHHHHHHHH---HHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 455566555 9999999999995 778776
No 135
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=351.59 Aligned_cols=259 Identities=15% Similarity=0.130 Sum_probs=196.1
Q ss_pred hcCCCCCeeeecCCceEEEEEeC----CCCEEEEEeccccch------------hHHHHHHHHHHHhccCCCCccceeeE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP----DGSVLAVKRLNTCKL------------GEKKFRNEMNRLGQLRHPNLAPLLGY 387 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~----~g~~vAvK~~~~~~~------------~~~~~~~Ev~~l~~l~H~nIv~l~g~ 387 (611)
++|...+.||+|+||.||+|+.. ++..||||++..... ..+.+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888899999999999999975 578999999865321 11347789999999999999999999
Q ss_pred EEe----CCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC--C
Q 035917 388 CVV----EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF--D 461 (611)
Q Consensus 388 ~~~----~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~--~ 461 (611)
+.. ....++||||+ +++|.+++.... .+++..++.++.|++.||+||| +.+|+||||||+|||++.++ .
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG-TFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG-BCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCc
Confidence 988 67889999999 999999997553 6999999999999999999999 78999999999999998877 9
Q ss_pred eEEeecccccccCCCCC-----CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHH----HH
Q 035917 462 ARIMDFGLAKLMTSSDE-----SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVN----QL 532 (611)
Q Consensus 462 ~kl~DFGla~~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~----~~ 532 (611)
+||+|||+++.+..... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~ 271 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQ 271 (345)
T ss_dssp EEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHH
T ss_pred EEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHH
Confidence 99999999987643221 1112344699999999999988899999999999999999999999842100 00
Q ss_pred hhcCC----hhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 533 SSSGR----SKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 533 ~~~~~----~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
..... ....+.........++++.+++. +||+.||++||++.+|++.|+++....
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~~~~~ 330 (345)
T 2v62_A 272 TAKTNLLDELPQSVLKWAPSGSSCCEIAQFLV---CAHSLAYDEKPNYQALKKILNPHGIPL 330 (345)
T ss_dssp HHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHCTTCCCC
T ss_pred HHHHhhcccccHHHHhhccccccHHHHHHHHH---HHhhcCcccCCCHHHHHHHHhccCCcc
Confidence 00000 00111111111134445555555 999999999999999999999866543
No 136
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.2e-40 Score=335.87 Aligned_cols=263 Identities=17% Similarity=0.211 Sum_probs=206.4
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEE-EeCCeeEEEEec
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYC-VVEEEKLLIYKY 400 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~-~~~~~~~lv~ey 400 (611)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ..+++.+|+.++.+++|++++..++++ ...+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEe
Confidence 46788889999999999999995 679999999986533 234689999999999998877777666 456778999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe---CCCCCeEEeecccccccCCCC
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV---DEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---d~~~~~kl~DFGla~~~~~~~ 477 (611)
+ +++|.+++......+++..+..++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+++......
T Consensus 87 ~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 87 L-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred c-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 9 89999999755567999999999999999999999 7899999999999999 488899999999998765433
Q ss_pred CC-----ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh------
Q 035917 478 ES-----SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL------ 546 (611)
Q Consensus 478 ~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l------ 546 (611)
.. .......||+.|+|||.+.+..++.++|||||||++|||++|+.||..... ...............
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA-ATKRQKYERISEKKMSTPIEV 241 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC-SSSSSHHHHHHHHHHHSCHHH
T ss_pred cccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc-hhhhhhhhhhcccccCCchHH
Confidence 21 112345699999999999998999999999999999999999988742100 000000011111111
Q ss_pred cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCCC
Q 035917 547 CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFSE 594 (611)
Q Consensus 547 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (611)
.....++++.++++ +||+.||++|||+.+|++.|+++.++.+...
T Consensus 242 ~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~l~~~~~~~~~~~ 286 (296)
T 3uzp_A 242 LCKGYPSEFATYLN---FCRSLRFDDKPDYSYLRQLFRNLFHRQGFSY 286 (296)
T ss_dssp HTTTSCHHHHHHHH---HHHTSCTTCCCCHHHHHHHHHHHHHHTTCCS
T ss_pred HHhhCCHHHHHHHH---HHHhcCcCcCCCHHHHHHHHHHHHHhcCCcc
Confidence 11233445555554 9999999999999999999999999887653
No 137
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.7e-40 Score=347.42 Aligned_cols=243 Identities=16% Similarity=0.181 Sum_probs=199.7
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888899999999999999964 69999999996532 23467899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 121 e~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRI-GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp ECCTTCBHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred cCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 999999999999754 35899999999999999999999 789999999999999999999999999999876432
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cCCCCHHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CGKGYDEEILQ 557 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~ 557 (611)
....+||+.|+|||++.+..++.++|||||||++|||++|..||........ ...+..... .+...+.++.+
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~p~~~~~~~~~ 267 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI----YEKIVSGKVRFPSHFSSDLKD 267 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCTTCCHHHHH
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHH----HHHHHcCCCCCCCCCCHHHHH
Confidence 1234699999999999998999999999999999999999988732100000 000111000 12234556666
Q ss_pred HHHHHhhcccCCCCCCCC-----HHHHHHH
Q 035917 558 FLKVACNCVVSRPKDRWS-----MYQVYQS 582 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RPs-----~~evl~~ 582 (611)
++. +||+.||++||+ ++||++|
T Consensus 268 li~---~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 268 LLR---NLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp HHH---HHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred HHH---HHhhcCHHhccCCccCCHHHHHhC
Confidence 655 999999999998 8999876
No 138
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.7e-41 Score=350.93 Aligned_cols=260 Identities=14% Similarity=0.183 Sum_probs=203.5
Q ss_pred hcCCCCCeeeecCCceEEEEEeC---------CCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccc-----------
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP---------DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAP----------- 383 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~---------~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~----------- 383 (611)
++|...+.||+|+||.||+|+.. +++.||||++... +.+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 57888899999999999999965 3889999998653 46889999999999999988
Q ss_pred ----eeeEEEe-CCeeEEEEeccCCCChHHhhhcC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC
Q 035917 384 ----LLGYCVV-EEEKLLIYKYMSSGTLYSLLQGN-ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD 457 (611)
Q Consensus 384 ----l~g~~~~-~~~~~lv~ey~~~gsL~~~l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld 457 (611)
+++++.. ++..++||||+ +|+|.+++... ...+++..++.++.|++.||.||| +.+|+||||||+|||++
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVD 193 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEc
Confidence 6777776 67889999999 99999999865 246999999999999999999999 78999999999999999
Q ss_pred CCC--CeEEeecccccccCCCCCC-----ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHH-
Q 035917 458 EDF--DARIMDFGLAKLMTSSDES-----SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWV- 529 (611)
Q Consensus 458 ~~~--~~kl~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~- 529 (611)
.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 273 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLP 273 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTT
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCc
Confidence 988 9999999999876432211 11133469999999999999899999999999999999999998875321
Q ss_pred --HHHhhc-----CChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCCC
Q 035917 530 --NQLSSS-----GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFSE 594 (611)
Q Consensus 530 --~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~~ 594 (611)
...... .......+........++++.+++. +||+.||++||++.+|++.|+++.+..+...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~ 342 (352)
T 2jii_A 274 NTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLK---VVMALTYEEKPPYAMLRNNLEALLQDLRVSP 342 (352)
T ss_dssp CHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHH---HHHTCCTTCCCCHHHHHHHHHHHHHHTTCCT
T ss_pred CHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHH---HHHhCChhhCCCHHHHHHHHHHHHHhcCCCc
Confidence 000000 0000000000000123455556555 9999999999999999999999999987553
No 139
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.3e-40 Score=348.90 Aligned_cols=248 Identities=20% Similarity=0.221 Sum_probs=199.4
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeE
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKL 395 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~ 395 (611)
..++|...+.||+|+||.||+|+.. +|+.||||+++... ...+.+..|..++..+ +||||+++++++.+.+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4567888899999999999999964 68999999996532 2345688899999887 8999999999999999999
Q ss_pred EEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
+||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 95 lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 999999999999999754 35899999999999999999999 78999999999999999999999999999986432
Q ss_pred CCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhc-hhhcCCCCHHH
Q 035917 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID-KALCGKGYDEE 554 (611)
Q Consensus 476 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~ 554 (611)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|..||........ ...+.. ....+...+++
T Consensus 171 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~p~~~s~~ 244 (345)
T 1xjd_A 171 GD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL----FHSIRMDNPFYPRWLEKE 244 (345)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCTTSCHH
T ss_pred CC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHH----HHHHHhCCCCCCcccCHH
Confidence 22 122345799999999999998999999999999999999999988742100000 000000 00112234556
Q ss_pred HHHHHHHHhhcccCCCCCCCCHH-HHHHH
Q 035917 555 ILQFLKVACNCVVSRPKDRWSMY-QVYQS 582 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RPs~~-evl~~ 582 (611)
+.+++. +||+.||++||++. ||++|
T Consensus 245 ~~~li~---~lL~~dp~~R~~~~~~i~~h 270 (345)
T 1xjd_A 245 AKDLLV---KLFVREPEKRLGVRGDIRQH 270 (345)
T ss_dssp HHHHHH---HHSCSSGGGSBTTBSCGGGS
T ss_pred HHHHHH---HHhcCCHhHcCCChHHHHcC
Confidence 666665 99999999999997 77654
No 140
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.1e-40 Score=341.78 Aligned_cols=242 Identities=17% Similarity=0.241 Sum_probs=176.1
Q ss_pred CCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccC-CCCccceeeEEEeCCeeEEEEeccCCCCh
Q 035917 329 ENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR-HPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406 (611)
Q Consensus 329 ~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~-H~nIv~l~g~~~~~~~~~lv~ey~~~gsL 406 (611)
++.||+|+||.||+|+.. +++.||||++... ....+.+|+.++.+++ ||||+++++++.+++..++||||+++|+|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 478999999999999964 6899999999643 3467889999999997 99999999999999999999999999999
Q ss_pred HHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC---CeEEeecccccccCCCCCCcccc
Q 035917 407 YSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF---DARIMDFGLAKLMTSSDESSFVN 483 (611)
Q Consensus 407 ~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~---~~kl~DFGla~~~~~~~~~~~~~ 483 (611)
.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+|||+++...... ....
T Consensus 94 ~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~ 167 (325)
T 3kn6_A 94 FERIKKK-KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPLK 167 (325)
T ss_dssp HHHHHHC-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--Cccc
Confidence 9999765 46999999999999999999999 78999999999999997655 89999999998654322 1223
Q ss_pred CCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcC---------CCCHHH
Q 035917 484 GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCG---------KGYDEE 554 (611)
Q Consensus 484 ~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---------~~~~~~ 554 (611)
...||+.|+|||++.+..++.++|||||||++|||++|..||........ .....+.+...... ...+++
T Consensus 168 ~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~s~~ 246 (325)
T 3kn6_A 168 TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLT-CTSAVEIMKKIKKGDFSFEGEAWKNVSQE 246 (325)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC--------CCCHHHHHHHHTTTCCCCCSHHHHTSCHH
T ss_pred ccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccc-cccHHHHHHHHHcCCCCCCcccccCCCHH
Confidence 44689999999999999999999999999999999999998854221110 01111111111111 012344
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 555 ILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+.+ ++.+||+.||++|||+.|+++|
T Consensus 247 ~~~---li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 247 AKD---LIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp HHH---HHHHHHCCCTTTCCCTTTSTTC
T ss_pred HHH---HHHHHCCCChhHCCCHHHHhcC
Confidence 444 5559999999999999999865
No 141
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.6e-40 Score=337.08 Aligned_cols=249 Identities=24% Similarity=0.323 Sum_probs=194.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeC-CeeEEEEecc
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE-EEKLLIYKYM 401 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~-~~~~lv~ey~ 401 (611)
.++|...+.||+|+||.||+|.. +|+.||||+++... ..+.+.+|++++++++||||+++++++... +..++||||+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA-TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCCCC---HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecchh-HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 35677889999999999999987 48899999997543 456799999999999999999999997654 4689999999
Q ss_pred CCCChHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 402 SSGTLYSLLQGNAT-ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 402 ~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
++|+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~--- 171 (278)
T 1byg_A 98 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 171 (278)
T ss_dssp TTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC-----------
T ss_pred CCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc---
Confidence 99999999975432 4889999999999999999999 7899999999999999999999999999998653321
Q ss_pred cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchh---hcCCCCHHHHH
Q 035917 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKA---LCGKGYDEEIL 556 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~ 556 (611)
....+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .....+... ......++++.
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~ 244 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-----DVVPRVEKGYKMDAPDGCPPAVY 244 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-----GHHHHHTTTCCCCCCTTCCHHHH
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHhcCCCCCCcccCCHHHH
Confidence 12247889999999988889999999999999999998 88776321000 000111110 01122344555
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
++++ +||+.||++||++.|+++.|+++...
T Consensus 245 ~li~---~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 245 EVMK---NCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp HHHH---HHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHH---HHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 5555 99999999999999999999998765
No 142
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3e-40 Score=335.24 Aligned_cols=247 Identities=23% Similarity=0.268 Sum_probs=196.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
.++|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 457888899999999999999864 57899999986432 2246789999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
|||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 88 ~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL-SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp ECCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999998754 35899999999999999999999 8899999999999999999999999999986543322
Q ss_pred CCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHH
Q 035917 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQ 557 (611)
Q Consensus 478 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 557 (611)
.....||+.|+|||.+.+..++.++||||||+++|||++|..||.......... .. ...... .....++++.+
T Consensus 164 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~~~ 236 (279)
T 3fdn_A 164 ----RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK-RI-SRVEFT-FPDFVTEGARD 236 (279)
T ss_dssp --------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH-HH-HHTCCC-CCTTSCHHHHH
T ss_pred ----ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHH-HH-HhCCCC-CCCcCCHHHHH
Confidence 123468999999999999899999999999999999999998863211000000 00 000001 12234455555
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHHHH
Q 035917 558 FLKVACNCVVSRPKDRWSMYQVYQSL 583 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RPs~~evl~~L 583 (611)
++. +||+.||++|||+.|+++|-
T Consensus 237 li~---~~l~~~p~~Rps~~e~l~h~ 259 (279)
T 3fdn_A 237 LIS---RLLKHNPSQRPMLREVLEHP 259 (279)
T ss_dssp HHH---HHCCSSGGGSCCHHHHHHCH
T ss_pred HHH---HHhccChhhCCCHHHHhhCc
Confidence 555 99999999999999999883
No 143
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.1e-40 Score=334.77 Aligned_cols=247 Identities=20% Similarity=0.221 Sum_probs=198.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch---hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL---GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
.++|...+.||+|+||.||+|... +|+.||+|++..... ..+.+.+|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467888899999999999999964 689999999965432 3367889999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC---eEEeecccccccCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD---ARIMDFGLAKLMTS 475 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~---~kl~DFGla~~~~~ 475 (611)
||+++|+|.+.+... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++. +||+|||++.....
T Consensus 85 e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 85 DLVTGGELFEDIVAR-EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999888654 35899999999999999999999 789999999999999976655 99999999987643
Q ss_pred CCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHH----HHHhhcCChhhhhchhhcCCCC
Q 035917 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWV----NQLSSSGRSKEAIDKALCGKGY 551 (611)
Q Consensus 476 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~ 551 (611)
... .....||+.|+|||.+.+..++.++||||||+++|||++|..||.... .......... .+.......
T Consensus 161 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 234 (284)
T 3kk8_A 161 SEA---WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD---YPSPEWDTV 234 (284)
T ss_dssp SCB---CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC---CCTTTTTTS
T ss_pred Ccc---ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcccc---CCchhhccc
Confidence 322 233469999999999999999999999999999999999998863210 0000000000 000011223
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 552 DEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 552 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++++.+++. +||+.||++|||+.|+++|
T Consensus 235 ~~~~~~li~---~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 235 TPEAKSLID---SMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CHHHHHHHH---HHSCSSTTTSCCHHHHTTS
T ss_pred CHHHHHHHH---HHcccChhhCCCHHHHhcC
Confidence 455555555 9999999999999999986
No 144
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=5.8e-40 Score=333.37 Aligned_cols=243 Identities=19% Similarity=0.260 Sum_probs=194.9
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEecccc---chhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEE
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTC---KLGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~l 396 (611)
..++|...+.||+|+||.||+|+.. +++.||||+++.. .....++.+|+..+.++ +||||+++++++.+++..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3467888899999999999999975 7999999998653 23456789999999999 89999999999999999999
Q ss_pred EEeccCCCChHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC---------------
Q 035917 397 IYKYMSSGTLYSLLQGNA---TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE--------------- 458 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~--------------- 458 (611)
||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 999999999999997532 45899999999999999999999 789999999999999984
Q ss_pred ----CCCeEEeecccccccCCCCCCccccCCCcccccccccccCCC-CCCcccchHHHHHHHHHHhCCCCCHHHH-HHHH
Q 035917 459 ----DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVLLELAGFKGNLVDW-VNQL 532 (611)
Q Consensus 459 ----~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl~ell~~~~~~~~~-~~~~ 532 (611)
...+||+|||+++...... ...||+.|+|||.+.+. .++.++|||||||++|||+++..++... ....
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~ 239 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSPQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHE 239 (289)
T ss_dssp ----CCCEEECCCTTCEETTCSC------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHHH
T ss_pred ccCCceEEEEcccccccccCCcc------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHHH
Confidence 4479999999998764322 22489999999998765 5678999999999999999887653211 0011
Q ss_pred hhcCChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 533 SSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 533 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..... .+.+ ....++++.+++. +||+.||++|||+.|+++|
T Consensus 240 ~~~~~-----~~~~-~~~~~~~~~~li~---~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 240 IRQGR-----LPRI-PQVLSQEFTELLK---VMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HHTTC-----CCCC-SSCCCHHHHHHHH---HHTCSSGGGSCCHHHHHTC
T ss_pred HHcCC-----CCCC-CcccCHHHHHHHH---HHhCCCcccCCCHHHHhhC
Confidence 11111 0111 1234455555555 9999999999999999876
No 145
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.4e-40 Score=342.58 Aligned_cols=254 Identities=19% Similarity=0.183 Sum_probs=195.3
Q ss_pred HHHhhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc------hhHHHHHHHHHHHhccCCCCccceeeEEEeC
Q 035917 319 LMAASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK------LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE 391 (611)
Q Consensus 319 l~~~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~------~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~ 391 (611)
+....++|...+.||+|+||.||+|+. .+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.
T Consensus 21 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 100 (345)
T 3hko_A 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDE 100 (345)
T ss_dssp HHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccC
Confidence 445677899999999999999999996 568899999986432 2346799999999999999999999999999
Q ss_pred CeeEEEEeccCCCChHHhhhcC---------------------------------------CCCCCHHHHHHHHHHHHHH
Q 035917 392 EEKLLIYKYMSSGTLYSLLQGN---------------------------------------ATELDWPTRFRIGLGAARG 432 (611)
Q Consensus 392 ~~~~lv~ey~~~gsL~~~l~~~---------------------------------------~~~l~~~~~~~i~~~ia~g 432 (611)
+..++||||+++|+|.+++... ...+++..+..++.|++.|
T Consensus 101 ~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~ 180 (345)
T 3hko_A 101 QYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSA 180 (345)
T ss_dssp SEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999988520 0123567788899999999
Q ss_pred HHHHhhcCCCCeeecCCCCCeEEeCCCC--CeEEeecccccccCCCC--CCccccCCCcccccccccccCC--CCCCccc
Q 035917 433 LAWLHHGCQPPFLHQNICSNVILVDEDF--DARIMDFGLAKLMTSSD--ESSFVNGDLGEFGYIAPEYSST--MVASLKG 506 (611)
Q Consensus 433 L~yLH~~~~~~ivHrDlkp~NILld~~~--~~kl~DFGla~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~--~~~t~ks 506 (611)
|+||| +.+|+||||||+||+++.++ .+||+|||+++.+.... .........||+.|+|||.+.+ ..++.++
T Consensus 181 l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 257 (345)
T 3hko_A 181 LHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKC 257 (345)
T ss_dssp HHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHH
T ss_pred HHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHH
Confidence 99999 78999999999999998766 89999999998654322 1112234569999999998865 6789999
Q ss_pred chHHHHHHHHHHhCCCCCHHH-----HHHHHhhcCChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHH
Q 035917 507 DVYGIGVVLLELAGFKGNLVD-----WVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQ 581 (611)
Q Consensus 507 DV~SfGvvl~ell~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~ 581 (611)
|||||||++|||++|+.||.. ............ ..+ .....++++.++++ +||+.||++||++.|+++
T Consensus 258 DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~li~---~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 258 DAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF--ENP--NYNVLSPLARDLLS---NLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCT--TSG--GGGGSCHHHHHHHH---HHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhccccc--CCc--ccccCCHHHHHHHH---HHcCCChhHCCCHHHHhc
Confidence 999999999999999988732 111111111000 000 00113445555555 999999999999999998
Q ss_pred H
Q 035917 582 S 582 (611)
Q Consensus 582 ~ 582 (611)
|
T Consensus 331 h 331 (345)
T 3hko_A 331 H 331 (345)
T ss_dssp S
T ss_pred C
Confidence 6
No 146
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.9e-40 Score=343.53 Aligned_cols=257 Identities=25% Similarity=0.356 Sum_probs=200.2
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCE--EEEEecccc--chhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSV--LAVKRLNTC--KLGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~--vAvK~~~~~--~~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~lv 397 (611)
++|...+.||+|+||.||+|+.. ++.. ||||.++.. ....+.+.+|++++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 47888899999999999999954 5654 499998643 22345789999999999 899999999999999999999
Q ss_pred EeccCCCChHHhhhcCC---------------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCe
Q 035917 398 YKYMSSGTLYSLLQGNA---------------TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDA 462 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~---------------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~ 462 (611)
|||+++|+|.+++.... ..+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 99999999999997543 36899999999999999999999 7899999999999999999999
Q ss_pred EEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhh
Q 035917 463 RIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEA 541 (611)
Q Consensus 463 kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~ 541 (611)
||+|||+++...... ......+++.|+|||.+.+..++.++|||||||++|||++ |+.||.......... .....
T Consensus 182 kL~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~-~~~~~ 257 (327)
T 1fvr_A 182 KIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYE-KLPQG 257 (327)
T ss_dssp EECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-HGGGT
T ss_pred EEcccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHH-HhhcC
Confidence 999999997532211 1122347889999999988889999999999999999998 888873211100000 00000
Q ss_pred hchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 542 IDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 542 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
... ......++++.+++. +||+.||++|||+.|++++|+++.++..
T Consensus 258 ~~~-~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 258 YRL-EKPLNCDDEVYDLMR---QCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp CCC-CCCTTBCHHHHHHHH---HHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred CCC-CCCCCCCHHHHHHHH---HHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 000 011223445555554 9999999999999999999999988754
No 147
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.5e-40 Score=338.97 Aligned_cols=251 Identities=21% Similarity=0.259 Sum_probs=191.9
Q ss_pred hhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc------hhHHHHHHHHHHHhccC---CCCccceeeEEEeC
Q 035917 322 ASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK------LGEKKFRNEMNRLGQLR---HPNLAPLLGYCVVE 391 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~------~~~~~~~~Ev~~l~~l~---H~nIv~l~g~~~~~ 391 (611)
.+++|...+.||+|+||.||+|+. .+++.||||+++... .....+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356889999999999999999995 579999999986322 11346778888777764 99999999999876
Q ss_pred C-----eeEEEEeccCCCChHHhhhcCCC-CCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEe
Q 035917 392 E-----EKLLIYKYMSSGTLYSLLQGNAT-ELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIM 465 (611)
Q Consensus 392 ~-----~~~lv~ey~~~gsL~~~l~~~~~-~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~ 465 (611)
. ..++||||+. |+|.+++..... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEe
Confidence 5 4789999997 599999986543 5999999999999999999999 7889999999999999999999999
Q ss_pred ecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhhc-CC-h
Q 035917 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSSS-GR-S 538 (611)
Q Consensus 466 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~~-~~-~ 538 (611)
|||+++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.. ........ +. .
T Consensus 163 Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 163 DFGLARIYSYQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp SCSCTTTSTTCCC---SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eCccccccCCCcc---cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9999987643322 2234689999999999888999999999999999999999988631 11111100 00 0
Q ss_pred hh-----------hhchh------hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 539 KE-----------AIDKA------LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 539 ~~-----------~~~~~------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.. .+.+. ......++++.+ ++.+||+.||++|||+.|+++|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQ---LLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHH---HHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHH---HHHHHhcCCCccCCCHHHHhcC
Confidence 00 00000 000123344444 4459999999999999999875
No 148
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=2.8e-40 Score=343.99 Aligned_cols=246 Identities=18% Similarity=0.212 Sum_probs=190.2
Q ss_pred hcCCCCCeeeecCCceEEEEEe----CCCCEEEEEeccccc-----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCee
Q 035917 324 NSFCSENVIISTRTGTTYKAML----PDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~ 394 (611)
++|...+.||+|+||.||+|+. .+|+.||+|+++... .....+.+|+.++++++||||+++++++..++..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 5688889999999999999996 479999999997542 2235688999999999999999999999999999
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
++||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 97 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 97 YLILEYLSGGELFMQLERE-GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEECCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEeCCCCCcHHHHHHhC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 9999999999999999754 35889999999999999999999 7899999999999999999999999999998643
Q ss_pred CCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cCCCCHH
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CGKGYDE 553 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~ 553 (611)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..... .....+.
T Consensus 173 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~----~~~i~~~~~~~p~~~~~ 246 (327)
T 3a62_A 173 HDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT----IDKILKCKLNLPPYLTQ 246 (327)
T ss_dssp --------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHTCCCCCTTSCH
T ss_pred cCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH----HHHHHhCCCCCCCCCCH
Confidence 222 122334699999999999988999999999999999999999988732100000 000111000 1123445
Q ss_pred HHHHHHHHHhhcccCCCCCCC-----CHHHHHHH
Q 035917 554 EILQFLKVACNCVVSRPKDRW-----SMYQVYQS 582 (611)
Q Consensus 554 ~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 582 (611)
++.+++. +||+.||++|| ++.|+++|
T Consensus 247 ~~~~li~---~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 247 EARDLLK---KLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp HHHHHHH---HHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred HHHHHHH---HHHhcCHhhccCCCCCCHHHHHcC
Confidence 5666555 99999999999 78899886
No 149
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3e-40 Score=337.51 Aligned_cols=254 Identities=21% Similarity=0.271 Sum_probs=198.9
Q ss_pred hcCCCCC-eeeecCCceEEEEEe---CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 324 NSFCSEN-VIISTRTGTTYKAML---PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 324 ~~f~~~~-~ig~G~~g~Vy~~~~---~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
+.|...+ .||+|+||.||+|.. .+++.||||+++... ...+++.+|++++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4556666 899999999999964 347899999997542 2246799999999999999999999999 5677899
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170 (291)
T ss_dssp EEECCTTEEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTT
T ss_pred EEEeCCCCCHHHHHHhC-cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccC
Confidence 99999999999999764 45899999999999999999999 789999999999999999999999999999876543
Q ss_pred CCC-ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhch---hhcCCCC
Q 035917 477 DES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDK---ALCGKGY 551 (611)
Q Consensus 477 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~ 551 (611)
... .......+++.|+|||.+.+..++.++||||||+++|||++ |+.||....... ..+.+.. .......
T Consensus 171 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~ 245 (291)
T 1xbb_A 171 ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----VTAMLEKGERMGCPAGC 245 (291)
T ss_dssp CSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCCTTC
T ss_pred CCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCC
Confidence 321 11122346789999999988889999999999999999998 888874311100 0001100 0111233
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 552 DEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 552 ~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
++++.+++. +||+.||++||++.++++.|+++....
T Consensus 246 ~~~l~~li~---~~l~~dp~~Rps~~~l~~~L~~~~~~~ 281 (291)
T 1xbb_A 246 PREMYDLMN---LCWTYDVENRPGFAAVELRLRNYYYDV 281 (291)
T ss_dssp CHHHHHHHH---HHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHH---HHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 445555555 999999999999999999999987653
No 150
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=6.1e-41 Score=346.20 Aligned_cols=255 Identities=18% Similarity=0.263 Sum_probs=191.8
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCe----e
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE----K 394 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~----~ 394 (611)
+.|...+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+.++.+++||||+++++++..... .
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5677889999999999999995 678999999996542 223578999999999999999999999876543 4
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 92 ~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTE-GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEECCCEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred EEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 9999999999999999754 35899999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCC-ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcC
Q 035917 475 SSDES-SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCG 548 (611)
Q Consensus 475 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~ 548 (611)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||... ........ ...+....
T Consensus 168 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~ 243 (311)
T 3ork_A 168 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRED----PIPPSARH 243 (311)
T ss_dssp --------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCC----CCCHHHHS
T ss_pred ccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCC----CCCccccc
Confidence 43211 1223346899999999999889999999999999999999999886321 11111111 01111112
Q ss_pred CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHH-HHHHchhh
Q 035917 549 KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQ-SLNSIAAQ 589 (611)
Q Consensus 549 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~-~L~~i~~~ 589 (611)
...++++.+++. +||+.||++||++.++++ .+..+...
T Consensus 244 ~~~~~~l~~li~---~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 244 EGLSADLDAVVL---KALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp TTCCHHHHHHHH---HHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHH---HHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 233445555555 999999999997666554 46555443
No 151
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=5.7e-40 Score=340.48 Aligned_cols=246 Identities=18% Similarity=0.262 Sum_probs=199.4
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch-------hHHHHHHHHHHHhccCCCCccceeeEEEeCCee
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL-------GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK 394 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~-------~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~ 394 (611)
.+.|...+.||+|+||.||+|+.. +|+.||||+++.... ..+++.+|+.++++++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456888899999999999999964 689999999864321 357799999999999999999999999999999
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC----CeEEeecccc
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF----DARIMDFGLA 470 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~----~~kl~DFGla 470 (611)
++||||+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK-ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC-SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 9999999999999999754 46899999999999999999999 78999999999999999887 7999999999
Q ss_pred cccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhhcCChhhhhchh
Q 035917 471 KLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSSSGRSKEAIDKA 545 (611)
Q Consensus 471 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 545 (611)
+....... .....||+.|+|||.+.+..++.++|||||||++|||++|..||.. ........ .. ..++.
T Consensus 167 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~-~~--~~~~~ 240 (321)
T 2a2a_A 167 HEIEDGVE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSV-SY--DFDEE 240 (321)
T ss_dssp EECCTTCC---CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT-CC--CCCHH
T ss_pred eecCcccc---ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhc-cc--ccChh
Confidence 87654321 2334699999999999988999999999999999999999988732 11111100 00 00111
Q ss_pred hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 546 LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 546 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.. ...++++.+++. +||+.||++|||+.|+++|
T Consensus 241 ~~-~~~~~~~~~li~---~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 241 FF-SHTSELAKDFIR---KLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp HH-TTCCHHHHHHHH---TTSCSSTTTSCCHHHHHHS
T ss_pred hh-cccCHHHHHHHH---HHcCCChhhCcCHHHHhcC
Confidence 11 123344455554 9999999999999999986
No 152
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.6e-40 Score=360.72 Aligned_cols=247 Identities=19% Similarity=0.187 Sum_probs=191.4
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
.++|...+.||+|+||.||+|+. .+|+.||||+++... .....+.+|+.++++++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 45788889999999999999995 569999999996532 2235678999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCC-CCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQ-PPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
|||+++|+|.+++... ..+++..+..++.|++.||+||| + .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 227 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp ECCCSSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EeeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 9999999999998754 36899999999999999999999 5 88999999999999999999999999999864322
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEI 555 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~ 555 (611)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.... ..+...++++
T Consensus 303 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~----~~~i~~~~~~~p~~~~~~~ 376 (446)
T 4ejn_A 303 G--ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL----FELILMEEIRFPRTLGPEA 376 (446)
T ss_dssp ------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCTTSCHHH
T ss_pred C--cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH----HHHHHhCCCCCCccCCHHH
Confidence 2 222345799999999999999999999999999999999999988732100000 00000000 0122344555
Q ss_pred HHHHHHHhhcccCCCCCCC-----CHHHHHHH
Q 035917 556 LQFLKVACNCVVSRPKDRW-----SMYQVYQS 582 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 582 (611)
.+++. +||+.||++|| ++.|+++|
T Consensus 377 ~~li~---~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 377 KSLLS---GLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp HHHHH---HHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred HHHHH---HHcccCHHHhCCCCCCCHHHHHhC
Confidence 56555 99999999999 99999986
No 153
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-39 Score=354.89 Aligned_cols=245 Identities=22% Similarity=0.331 Sum_probs=199.4
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch----hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL----GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+.. +|+.||||+++.... ..+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 46777899999999999999965 799999999965322 2367899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 96 E~~~gg~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~- 170 (476)
T 2y94_A 96 EYVSGGELFDYICKN-GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 170 (476)
T ss_dssp ECCSSEEHHHHTTSS-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-
T ss_pred eCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-
Confidence 999999999999754 46999999999999999999999 8899999999999999999999999999998764332
Q ss_pred CccccCCCcccccccccccCCCCC-CcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cCCCCHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVA-SLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CGKGYDEEIL 556 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~ 556 (611)
.....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.+..... ....+.+... .+...+.++.
T Consensus 171 --~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~----~~~~i~~~~~~~p~~~s~~~~ 244 (476)
T 2y94_A 171 --FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPT----LFKKICDGIFYTPQYLNPSVI 244 (476)
T ss_dssp --CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHH----HHHHHHTTCCCCCTTCCHHHH
T ss_pred --cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHH----HHHHHhcCCcCCCccCCHHHH
Confidence 2234579999999999988765 689999999999999999998874210000 0001111100 1122345555
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+++. +||+.||++|||+.|+++|
T Consensus 245 ~Li~---~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 245 SLLK---HMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp HHHH---HHTCSSTTTSCCHHHHHTC
T ss_pred HHHH---HHcCCCchhCcCHHHHHhC
Confidence 5555 9999999999999999986
No 154
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=3e-40 Score=372.94 Aligned_cols=247 Identities=21% Similarity=0.272 Sum_probs=193.7
Q ss_pred CeeeecCCceEEEEEe---CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccCC
Q 035917 330 NVIISTRTGTTYKAML---PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMSS 403 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~---~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~~ 403 (611)
+.||+|+||.||+|.+ ..++.||||+++... ...+++.+|+++|++++|||||+++++|. .+..++|||||++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCCEEEEEEccCC
Confidence 4799999999999975 346789999997543 23578999999999999999999999996 4568899999999
Q ss_pred CChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC-Cccc
Q 035917 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE-SSFV 482 (611)
Q Consensus 404 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~-~~~~ 482 (611)
|+|.+++... ..+++..+..|+.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+..... ....
T Consensus 454 g~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 529 (635)
T 4fl3_A 454 GPLNKYLQQN-RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQ 529 (635)
T ss_dssp EEHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC--------
T ss_pred CCHHHHHhhC-CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccc
Confidence 9999999754 46899999999999999999999 78999999999999999999999999999987654331 1122
Q ss_pred cCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhh---cCCCCHHHHHHH
Q 035917 483 NGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKAL---CGKGYDEEILQF 558 (611)
Q Consensus 483 ~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~l 558 (611)
....||+.|+|||++.+..++.++|||||||++|||++ |+.||....... ..+.+.... .....++++.+
T Consensus 530 ~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-----~~~~i~~~~~~~~p~~~~~~l~~- 603 (635)
T 4fl3_A 530 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE-----VTAMLEKGERMGCPAGCPREMYD- 603 (635)
T ss_dssp -----CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH-----HHHHHHTTCCCCCCTTCCHHHHH-
T ss_pred cCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH-----HHHHHHcCCCCCCCCCCCHHHHH-
Confidence 23357889999999998899999999999999999998 888874311110 011111111 12233444555
Q ss_pred HHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 559 LKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 559 ~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
++.+||+.||++||++.+|++.|+++...
T Consensus 604 --li~~cl~~dP~~RPs~~~l~~~L~~~~~~ 632 (635)
T 4fl3_A 604 --LMNLCWTYDVENRPGFAAVELRLRNYYYD 632 (635)
T ss_dssp --HHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred --HHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence 55599999999999999999999987654
No 155
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=7.5e-40 Score=334.21 Aligned_cols=245 Identities=22% Similarity=0.274 Sum_probs=189.6
Q ss_pred CCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEe----CCeeEEE
Q 035917 326 FCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVV----EEEKLLI 397 (611)
Q Consensus 326 f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~----~~~~~lv 397 (611)
|...+.||+|+||.||+|.. .++..||+|.+.... ...+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 55567899999999999996 468899999986533 234678999999999999999999999875 3457899
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCeEEeC-CCCCeEEeecccccccC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPP--FLHQNICSNVILVD-EDFDARIMDFGLAKLMT 474 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILld-~~~~~kl~DFGla~~~~ 474 (611)
|||+++|+|.+++... ..+++..+..++.+++.||.||| +.+ |+||||||+||+++ .++.+||+|||+++...
T Consensus 108 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~ 183 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRF-KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR 183 (290)
T ss_dssp EECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCC
T ss_pred EEecCCCCHHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccc
Confidence 9999999999999754 35899999999999999999999 666 99999999999997 78999999999997653
Q ss_pred CCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHH
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEE 554 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 554 (611)
... .....||+.|+|||.+.+ .++.++|||||||++|||++|+.||..................+.......+++
T Consensus 184 ~~~----~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (290)
T 1t4h_A 184 ASF----AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE 258 (290)
T ss_dssp TTS----BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHH
T ss_pred ccc----cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHH
Confidence 322 123358999999998764 589999999999999999999988742100000000000000111111122344
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 555 ILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+.+ ++.+||+.||++|||+.|+++|
T Consensus 259 l~~---li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 259 VKE---IIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp HHH---HHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHH---HHHHHccCChhhCCCHHHHhhC
Confidence 444 5559999999999999999875
No 156
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=5.2e-40 Score=351.53 Aligned_cols=246 Identities=17% Similarity=0.213 Sum_probs=186.2
Q ss_pred hcCCCC-CeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhc-cCCCCccceeeEEEe----CCeeEE
Q 035917 324 NSFCSE-NVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQ-LRHPNLAPLLGYCVV----EEEKLL 396 (611)
Q Consensus 324 ~~f~~~-~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~-l~H~nIv~l~g~~~~----~~~~~l 396 (611)
++|... ++||+|+||.||+|+.. +|+.||||+++.. ..+.+|+.++.+ .+||||+++++++.. .+..++
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~l 136 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 136 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEE
Confidence 345444 68999999999999964 6899999999643 457788888744 489999999999875 556899
Q ss_pred EEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC---CCCeEEeecccccc
Q 035917 397 IYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE---DFDARIMDFGLAKL 472 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~---~~~~kl~DFGla~~ 472 (611)
|||||++|+|.+++.... ..+++..+..++.||+.||.||| +.+|+||||||+|||++. ++.+||+|||+++.
T Consensus 137 v~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~ 213 (400)
T 1nxk_A 137 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 213 (400)
T ss_dssp EEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence 999999999999998654 36999999999999999999999 789999999999999997 78999999999987
Q ss_pred cCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhc------hhh
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID------KAL 546 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~------~~l 546 (611)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||........ .......+. +..
T Consensus 214 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~~~~~~~i~~~~~~~~~~ 289 (400)
T 1nxk_A 214 TTSHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-SPGMKTRIRMGQYEFPNP 289 (400)
T ss_dssp CC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSS-CCSHHHHHHHTCCCCCTT
T ss_pred cCCCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccc-cHHHHHHHHcCcccCCCc
Confidence 54322 22345689999999999999999999999999999999999988732100000 000000000 000
Q ss_pred cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 035917 547 CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSL 583 (611)
Q Consensus 547 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 583 (611)
.....++++.++++ +||+.||++|||+.|+++|-
T Consensus 290 ~~~~~s~~~~~li~---~~L~~dP~~Rpt~~eil~hp 323 (400)
T 1nxk_A 290 EWSEVSEEVKMLIR---NLLKTEPTQRMTITEFMNHP 323 (400)
T ss_dssp TTTTSCHHHHHHHH---TTSCSSGGGSCCHHHHHHSH
T ss_pred ccccCCHHHHHHHH---HHCCCChhHCcCHHHHhcCc
Confidence 11224455555555 99999999999999999873
No 157
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.9e-40 Score=351.33 Aligned_cols=259 Identities=17% Similarity=0.237 Sum_probs=203.6
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCC--eeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE--EKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~--~~~lv~ 398 (611)
+.|...++||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 46777899999999999999965 59999999997533 33567889999999999999999999998765 679999
Q ss_pred eccCCCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe----CCCCCeEEeecccccc
Q 035917 399 KYMSSGTLYSLLQGNA--TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV----DEDFDARIMDFGLAKL 472 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----d~~~~~kl~DFGla~~ 472 (611)
||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997543 24999999999999999999999 7899999999999999 7788899999999987
Q ss_pred cCCCCCCccccCCCcccccccccccCC--------CCCCcccchHHHHHHHHHHhCCCCCHHH---------HHHHHhhc
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSST--------MVASLKGDVYGIGVVLLELAGFKGNLVD---------WVNQLSSS 535 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~t~ksDV~SfGvvl~ell~~~~~~~~---------~~~~~~~~ 535 (611)
..... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.. ........
T Consensus 166 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 166 LEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CCCGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ccCCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 64322 2233469999999998764 5678899999999999999999988742 11111111
Q ss_pred CChhhhh-------------chhh--cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhh
Q 035917 536 GRSKEAI-------------DKAL--CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQ 589 (611)
Q Consensus 536 ~~~~~~~-------------~~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~ 589 (611)
. ....+ ...+ ...........+.+++.+||+.||++||++.|+++.++++...
T Consensus 243 ~-p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 243 K-PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp C-CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred C-CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 0 00000 0000 0011233444556677799999999999999999999988765
No 158
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.4e-40 Score=341.66 Aligned_cols=258 Identities=19% Similarity=0.219 Sum_probs=186.9
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc-hhHHHHHHHHHHHhccC-CCCccceeeEEEe--------CC
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLR-HPNLAPLLGYCVV--------EE 392 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~-H~nIv~l~g~~~~--------~~ 392 (611)
.+|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|+.++.++. ||||+++++++.. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 4677889999999999999995 479999999985443 34567899999999996 9999999999953 33
Q ss_pred eeEEEEeccCCCChHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC--eeecCCCCCeEEeCCCCCeEEeecc
Q 035917 393 EKLLIYKYMSSGTLYSLLQG--NATELDWPTRFRIGLGAARGLAWLHHGCQPP--FLHQNICSNVILVDEDFDARIMDFG 468 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILld~~~~~kl~DFG 468 (611)
..++||||+. |+|.+++.. ....+++..++.++.|++.||.||| +.+ |+||||||+|||++.++.+||+|||
T Consensus 108 ~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg 183 (337)
T 3ll6_A 108 EFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGTIKLCDFG 183 (337)
T ss_dssp EEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSCEEBCCCT
T ss_pred eEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCCEEEecCc
Confidence 4789999996 699998864 2346999999999999999999999 667 9999999999999999999999999
Q ss_pred cccccCCCCCCc----------cccCCCccccccccccc---CCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhc
Q 035917 469 LAKLMTSSDESS----------FVNGDLGEFGYIAPEYS---STMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSS 535 (611)
Q Consensus 469 la~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~ 535 (611)
+++......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||..........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~ 263 (337)
T 3ll6_A 184 SATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVN 263 (337)
T ss_dssp TCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------
T ss_pred cceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhc
Confidence 998765432111 11133589999999988 56678999999999999999999999985422111100
Q ss_pred CChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 536 GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 536 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
..... ......+..+.+ ++.+||+.||++|||+.|++++|+++.+.....
T Consensus 264 ----~~~~~-~~~~~~~~~~~~---li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~~~ 313 (337)
T 3ll6_A 264 ----GKYSI-PPHDTQYTVFHS---LIRAMLQVNPEERLSIAEVVHQLQEIAAARNVN 313 (337)
T ss_dssp ------CCC-CTTCCSSGGGHH---HHHHHSCSSGGGSCCHHHHHHHHHHHHHHTTCC
T ss_pred ----CcccC-CcccccchHHHH---HHHHHccCChhhCcCHHHHHHHHHHHHhccCCC
Confidence 00000 011122333444 455999999999999999999999999876544
No 159
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.7e-40 Score=333.09 Aligned_cols=244 Identities=19% Similarity=0.269 Sum_probs=176.7
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+. .+|+.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 4788899999999999999995 578999999996542 22467899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+ +++|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 93 e~~-~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 93 EYA-GNELFDYIVQR-DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp ECC-CEEHHHHHHTS-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred hhc-CCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 999 66888888754 45999999999999999999999 78999999999999999999999999999986643321
Q ss_pred CccccCCCcccccccccccCCCCC-CcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhch-hhcCCCCHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVA-SLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDK-ALCGKGYDEEIL 556 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~ 556 (611)
.....||+.|+|||.+.+..+ +.++|||||||++|||++|+.||......... ...... .......+.++.
T Consensus 168 ---~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 240 (275)
T 2eue_A 168 ---LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF----KNISNGVYTLPKFLSPGAA 240 (275)
T ss_dssp ----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTCCCCCTTSCHHHH
T ss_pred ---ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhCCCCCCccCCHHHH
Confidence 223468999999999887665 78999999999999999999886321100000 000000 011223445555
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++++ +||+.||++|||+.|+++|
T Consensus 241 ~li~---~~l~~dP~~Rps~~e~l~h 263 (275)
T 2eue_A 241 GLIK---RMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp HHHH---HHSCSSGGGSCCHHHHTTC
T ss_pred HHHH---HHhhcCHhHCCCHHHHhhC
Confidence 5555 9999999999999999876
No 160
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2e-39 Score=331.91 Aligned_cols=253 Identities=19% Similarity=0.238 Sum_probs=190.3
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEe-----------
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVV----------- 390 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~----------- 390 (611)
.++|...+.||+|+||.||+|+. .+++.||||+++......+.+.+|+.++++++||||+++++++.+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 46788889999999999999996 479999999997655556789999999999999999999999865
Q ss_pred --CCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecc
Q 035917 391 --EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFG 468 (611)
Q Consensus 391 --~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFG 468 (611)
.+..++||||+++|+|.+++......+++..++.++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg 161 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFG 161 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred ccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeCc
Confidence 34678999999999999999865556888999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCCC------------CccccCCCcccccccccccCCC-CCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhc
Q 035917 469 LAKLMTSSDE------------SSFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSS 535 (611)
Q Consensus 469 la~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~ 535 (611)
+++....... ........||+.|+|||.+.+. .++.++|||||||++|||++...+..+........
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~p~~~~~~~~~~~~~~ 241 (303)
T 1zy4_A 162 LAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKL 241 (303)
T ss_dssp CCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHH
T ss_pred chhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHhccCCchhHHHHHHhc
Confidence 9986542210 1112334689999999998764 68999999999999999998433221111110000
Q ss_pred CChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 536 GRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 536 ~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
........+. .....++.+.+ ++.+||+.||++|||+.|+++|
T Consensus 242 ~~~~~~~~~~-~~~~~~~~~~~---li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 242 RSVSIEFPPD-FDDNKMKVEKK---IIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HSTTCCCCTT-CCTTTSHHHHH---HHHHHTCSSGGGSCCHHHHHHS
T ss_pred cccccccCcc-ccccchHHHHH---HHHHHHhcCcccCcCHHHHhCC
Confidence 0000000111 11122334444 5559999999999999999975
No 161
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.7e-40 Score=345.83 Aligned_cols=247 Identities=17% Similarity=0.168 Sum_probs=199.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~l 396 (611)
.++|...+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|..++..+ +||||+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 357888899999999999999975 48899999996532 2346688999999988 79999999999999999999
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 99 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 99999999999999754 35899999999999999999999 789999999999999999999999999999864322
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cCCCCHHHH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CGKGYDEEI 555 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~ 555 (611)
. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+..... .+...+.++
T Consensus 175 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~----~~~i~~~~~~~p~~~s~~~ 248 (353)
T 2i0e_A 175 G--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEHNVAYPKSMSKEA 248 (353)
T ss_dssp T--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHHCCCCCCTTSCHHH
T ss_pred C--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHH----HHHHHhCCCCCCCCCCHHH
Confidence 2 122345799999999999999999999999999999999999988742100000 001111110 122345566
Q ss_pred HHHHHHHhhcccCCCCCCCC-----HHHHHHH
Q 035917 556 LQFLKVACNCVVSRPKDRWS-----MYQVYQS 582 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs-----~~evl~~ 582 (611)
.+++. +||+.||++||+ ++||++|
T Consensus 249 ~~li~---~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 249 VAICK---GLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp HHHHH---HHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred HHHHH---HHhhcCHHHcCCCCCCCHHHHhcC
Confidence 66655 999999999995 5888776
No 162
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=2.5e-39 Score=349.82 Aligned_cols=195 Identities=18% Similarity=0.277 Sum_probs=163.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeC-----Ce
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE-----EE 393 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~-----~~ 393 (611)
.++|...+.||+|+||.||+|+. .+++.||||+++... ...+++.+|+++|++++||||+++++++... +.
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 45788889999999999999995 468899999996532 3346799999999999999999999999776 56
Q ss_pred eEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeeccccccc
Q 035917 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 394 ~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~ 473 (611)
.++||||+. |+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTP-IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEecCC-cCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 899999997 5999999754 46999999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCC--------------------ccccCCCccccccccccc-CCCCCCcccchHHHHHHHHHHhCCC
Q 035917 474 TSSDES--------------------SFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLELAGFK 522 (611)
Q Consensus 474 ~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~t~ksDV~SfGvvl~ell~~~ 522 (611)
...... ...+..+||+.|+|||++ ....++.++|||||||++|||++|.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~ 249 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNML 249 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcc
Confidence 433211 123456799999999985 5667999999999999999999753
No 163
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.2e-39 Score=352.86 Aligned_cols=194 Identities=20% Similarity=0.294 Sum_probs=153.6
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeC-----Ce
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE-----EE 393 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~-----~~ 393 (611)
.++|...+.||+|+||.||+|+. .+++.||||++.... ...+++.+|+++|++++|||||++++++... ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36788899999999999999995 478999999986532 3346789999999999999999999998543 46
Q ss_pred eEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeeccccccc
Q 035917 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 394 ~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~ 473 (611)
.|+||||+. |+|.+++... ..+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 132 ~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 132 LYVVLEIAD-SDFKKLFRTP-VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEEEECCCS-EEHHHHHHSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEEEeccc-cchhhhcccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 899999985 6999998754 46999999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCC-------------------------ccccCCCccccccccccc-CCCCCCcccchHHHHHHHHHHhCC
Q 035917 474 TSSDES-------------------------SFVNGDLGEFGYIAPEYS-STMVASLKGDVYGIGVVLLELAGF 521 (611)
Q Consensus 474 ~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~t~ksDV~SfGvvl~ell~~ 521 (611)
...... ...+..+||+.|+|||++ ....++.++|||||||++|||++|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 432110 123445789999999975 566799999999999999999983
No 164
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.7e-40 Score=336.96 Aligned_cols=250 Identities=18% Similarity=0.283 Sum_probs=181.9
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchh--H-HHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLG--E-KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~--~-~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
.++|...+.||+|+||.||+|+. .+|+.||||+++..... . +.+.++...++.++||||+++++++..++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 35788889999999999999996 57999999999754322 2 33455556688899999999999999999999999
Q ss_pred eccCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 399 KYMSSGTLYSLLQG---NATELDWPTRFRIGLGAARGLAWLHHGCQP-PFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 399 ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
||+++ +|.+++.. ....+++..+..++.|++.||+||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99975 88887753 3357999999999999999999999 65 99999999999999999999999999998764
Q ss_pred CCCCCccccCCCccccccccccc----CCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCC
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYS----STMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKG 550 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 550 (611)
.... .....||+.|+|||.+ .+..++.++|||||||++|||++|+.||..+...............+......
T Consensus 162 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (290)
T 3fme_A 162 DDVA---KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADK 238 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTT
T ss_pred cccc---ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCccccc
Confidence 3321 1223589999999985 56678999999999999999999998874211110000000000011111223
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.++++.+++. +||+.||++|||+.|+++|
T Consensus 239 ~~~~~~~li~---~~l~~~p~~Rpt~~e~l~h 267 (290)
T 3fme_A 239 FSAEFVDFTS---QCLKKNSKERPTYPELMQH 267 (290)
T ss_dssp SCHHHHHHHH---HHTCSSGGGSCCHHHHTTS
T ss_pred CCHHHHHHHH---HHhhcChhhCcCHHHHHhC
Confidence 4455555555 9999999999999999986
No 165
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=3.5e-39 Score=326.86 Aligned_cols=245 Identities=16% Similarity=0.196 Sum_probs=196.5
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEecccc-chhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTC-KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~-~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
.+.|...+.||+|+||.||+|+.. ++..||+|++... ....+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 456888899999999999999964 5789999998654 34467899999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe---CCCCCeEEeecccccccCCCC
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV---DEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---d~~~~~kl~DFGla~~~~~~~ 477 (611)
+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||++ +.++.+||+|||++.......
T Consensus 88 ~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 88 CTGGELFERVVHK-RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 9999999988754 35899999999999999999999 7899999999999999 788999999999998764332
Q ss_pred CCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCCCCH
Q 035917 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGKGYD 552 (611)
Q Consensus 478 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~ 552 (611)
......||+.|+|||.+.+. ++.++||||||+++|||++|+.||... ....... ... .+.......+
T Consensus 164 ---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~ 235 (277)
T 3f3z_A 164 ---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREG-TFT---FPEKDWLNVS 235 (277)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC-CCC---CCHHHHTTSC
T ss_pred ---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC-CCC---CCchhhhcCC
Confidence 22334699999999988764 899999999999999999998886321 1111000 000 0000001223
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 553 EEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 553 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+++.+ ++.+||+.||++|||+.|+++|
T Consensus 236 ~~~~~---li~~~l~~dp~~R~s~~~~l~h 262 (277)
T 3f3z_A 236 PQAES---LIRRLLTKSPKQRITSLQALEH 262 (277)
T ss_dssp HHHHH---HHHHHTCSSTTTSCCHHHHTTS
T ss_pred HHHHH---HHHHHccCChhhCcCHHHHhcC
Confidence 44445 4459999999999999999876
No 166
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=331.46 Aligned_cols=249 Identities=17% Similarity=0.228 Sum_probs=193.2
Q ss_pred cCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEeccC
Q 035917 325 SFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYMS 402 (611)
Q Consensus 325 ~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~~ 402 (611)
.|....+||+|+||.||+|+. .+++.||||.++... ...+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 345556999999999999995 568999999996543 335679999999999999999999999999999999999999
Q ss_pred CCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC-CCCeEEeecccccccCCCCCC
Q 035917 403 SGTLYSLLQGNA--TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE-DFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 403 ~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~-~~~~kl~DFGla~~~~~~~~~ 479 (611)
+++|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||+++......
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~-- 177 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN-- 177 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC--
Confidence 999999997653 25678999999999999999999 789999999999999987 8999999999998764322
Q ss_pred ccccCCCcccccccccccCCCC--CCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCCh-hhhhchhhcCCCCHHHHH
Q 035917 480 SFVNGDLGEFGYIAPEYSSTMV--ASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRS-KEAIDKALCGKGYDEEIL 556 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~~~--~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~ 556 (611)
.......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||............. .....+.+ ....++++.
T Consensus 178 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 256 (295)
T 2clq_A 178 PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI-PESMSAEAK 256 (295)
T ss_dssp ---CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCC-CTTSCHHHH
T ss_pred CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccc-cccCCHHHH
Confidence 1122346899999999986643 7899999999999999999998874311000000000 00001111 123345555
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+++. +||+.||++||++.|++++
T Consensus 257 ~li~---~~l~~dp~~Rps~~~ll~~ 279 (295)
T 2clq_A 257 AFIL---KCFEPDPDKRACANDLLVD 279 (295)
T ss_dssp HHHH---HTTCSSTTTSCCHHHHHTS
T ss_pred HHHH---HHccCChhhCCCHHHHhcC
Confidence 5555 9999999999999999875
No 167
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.4e-40 Score=343.51 Aligned_cols=260 Identities=21% Similarity=0.330 Sum_probs=198.7
Q ss_pred ccHHHHHHhhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhcc-CCCCccceeeEEEe-
Q 035917 314 VKLADLMAASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQL-RHPNLAPLLGYCVV- 390 (611)
Q Consensus 314 ~~~~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~- 390 (611)
+++.++....+.|...+.||+|+||.||+|+. .+|+.||||++.......+.+.+|+.++.++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 93 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKK 93 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEEC
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeec
Confidence 33444455677888999999999999999996 5799999999976655667899999999999 79999999999987
Q ss_pred -----CCeeEEEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEE
Q 035917 391 -----EEEKLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARI 464 (611)
Q Consensus 391 -----~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl 464 (611)
.+..++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||
T Consensus 94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~kl 170 (326)
T 2x7f_A 94 NPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKL 170 (326)
T ss_dssp C--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEE
T ss_pred cCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEEE
Confidence 467899999999999999997643 36899999999999999999999 789999999999999999999999
Q ss_pred eecccccccCCCCCCccccCCCcccccccccccC-----CCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChh
Q 035917 465 MDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSS-----TMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSK 539 (611)
Q Consensus 465 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~ 539 (611)
+|||++....... .......||+.|+|||++. +..++.++|||||||++|||++|..||.......... ...
T Consensus 171 ~Dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~ 247 (326)
T 2x7f_A 171 VDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-LIP 247 (326)
T ss_dssp CCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHH
T ss_pred eeCcCceecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHH-Hhh
Confidence 9999998654321 1122346899999999886 5678999999999999999999998874211000000 000
Q ss_pred hhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 540 EAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 540 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
....+.......++++.+++. +||+.||++||++.|+++|
T Consensus 248 ~~~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~h 287 (326)
T 2x7f_A 248 RNPAPRLKSKKWSKKFQSFIE---SCLVKNHSQRPATEQLMKH 287 (326)
T ss_dssp HSCCCCCSCSCSCHHHHHHHH---HHCCSSGGGSCCHHHHHTS
T ss_pred cCccccCCccccCHHHHHHHH---HHhccChhhCCCHHHHhhC
Confidence 001111222334556666655 9999999999999999986
No 168
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=334.68 Aligned_cols=250 Identities=20% Similarity=0.248 Sum_probs=191.0
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch---hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL---GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
++|...+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|++++++++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 46777899999999999999964 599999999865432 24668899999999999999999999999999999999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~ 479 (611)
|+++++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~~~~l~~~~~~~-~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 83 YCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp CCSEEHHHHHHHTS-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred eCCCchHHHHHhhh-cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 99999999988644 45899999999999999999999 78999999999999999999999999999987643221
Q ss_pred ccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHh---hc-----------CChh
Q 035917 480 SFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLS---SS-----------GRSK 539 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~---~~-----------~~~~ 539 (611)
......||+.|+|||.+.+ ..++.++|||||||++|||++|+.||... ..... .. ....
T Consensus 158 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (311)
T 4agu_A 158 -YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGG
T ss_pred -ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccccc
Confidence 1233468999999998865 66899999999999999999998876311 00000 00 0000
Q ss_pred hhh---ch------hhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 540 EAI---DK------ALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 540 ~~~---~~------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
... ++ .......+.+ +.+++.+||+.||++|||++|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 237 SGVKIPDPEDMEPLELKFPNISYP---ALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp TTCCCCCCSSCCCHHHHCTTCCHH---HHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccCcCCCccccchhhhhcccccHH---HHHHHHHHccCChhhcCCHHHHhcC
Confidence 000 00 0000122333 4455559999999999999999987
No 169
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.2e-39 Score=331.05 Aligned_cols=252 Identities=19% Similarity=0.301 Sum_probs=199.3
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc-------hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK-------LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-------~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~ 395 (611)
++|...+.||+|+||.||+|+.. +|+.||+|.++... ...+.+.+|+.++++++||||+++++++..++..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46788899999999999999975 69999999986432 13578999999999999999999999999999999
Q ss_pred EEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC----CeEEeeccccc
Q 035917 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF----DARIMDFGLAK 471 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~----~~kl~DFGla~ 471 (611)
+||||+++++|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++ .+||+|||+++
T Consensus 85 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEK-ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999999999753 35899999999999999999999 78999999999999998877 89999999998
Q ss_pred ccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhh
Q 035917 472 LMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKAL 546 (611)
Q Consensus 472 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l 546 (611)
....... .....||+.|+|||.+.+..++.++||||||+++|||++|..||... ..... .... ......
T Consensus 161 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~--~~~~~~ 234 (283)
T 3bhy_A 161 KIEAGNE---FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS-AVNY--DFDEEY 234 (283)
T ss_dssp ECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH-TTCC--CCCHHH
T ss_pred eccCCCc---ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhH-hccc--CCcchh
Confidence 7643221 22345899999999999889999999999999999999998886321 11100 0000 000111
Q ss_pred cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHchhh
Q 035917 547 CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS--LNSIAAQ 589 (611)
Q Consensus 547 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 589 (611)
. ...++++.+ ++.+||+.||++||++.|+++| ++.+.++
T Consensus 235 ~-~~~~~~~~~---li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 235 F-SNTSELAKD---FIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp H-TTCCHHHHH---HHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred c-ccCCHHHHH---HHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0 122344444 4459999999999999999986 5655544
No 170
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.9e-40 Score=342.85 Aligned_cols=253 Identities=22% Similarity=0.270 Sum_probs=191.2
Q ss_pred HhhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchh------HHHHHHHHHHHhccCCCCccceeeEEEeCCe
Q 035917 321 AASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLG------EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE 393 (611)
Q Consensus 321 ~~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~------~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~ 393 (611)
...+.|...+.||+|+||.||+|+.. +|+.||||+++..... .+.+.+|++++++++||||+++++++...+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 34567889999999999999999964 6899999999653221 2468899999999999999999999999999
Q ss_pred eEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeeccccccc
Q 035917 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 394 ~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~ 473 (611)
.++||||+++ +|.+++......+++..+..++.|+++||+||| +.+|+||||||+|||++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999986 899998876567899999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCCccccCCCcccccccccccCCC-CCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhhc-CCh-hhhh---
Q 035917 474 TSSDESSFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSSS-GRS-KEAI--- 542 (611)
Q Consensus 474 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~~-~~~-~~~~--- 542 (611)
.... .......||+.|+|||++.+. .++.++|||||||++|||++|..+|.. ........ +.. .+..
T Consensus 163 ~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 163 GSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp TSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred cCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhh
Confidence 4322 122334689999999998654 589999999999999999998876531 11111100 000 0000
Q ss_pred ----ch---hh--------cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 543 ----DK---AL--------CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 543 ----~~---~l--------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+. .. .....++++.+ ++.+||+.||++|||+.|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLD---LIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHH---HHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHH---HHHHHhccChhhCCCHHHHhcC
Confidence 00 00 00112344444 4559999999999999999987
No 171
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.6e-40 Score=338.21 Aligned_cols=251 Identities=19% Similarity=0.209 Sum_probs=188.0
Q ss_pred cCCC-CCeeeecCCceEEEEEe-CCCCEEEEEeccccc-hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEEEEec
Q 035917 325 SFCS-ENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 325 ~f~~-~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
.|.. +++||+|+||.||+|+. .+++.||||+++... ...+.+.+|++++.++ +||||+++++++.+++..++||||
T Consensus 13 ~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 92 (316)
T 2ac3_A 13 VYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92 (316)
T ss_dssp SCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred eEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEc
Confidence 4554 47899999999999994 579999999996543 3457799999999985 799999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC---eEEeecccccccCCCC
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD---ARIMDFGLAKLMTSSD 477 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~---~kl~DFGla~~~~~~~ 477 (611)
+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.++. +||+|||+++......
T Consensus 93 ~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 168 (316)
T 2ac3_A 93 MRGGSILSHIHKR-RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168 (316)
T ss_dssp CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred CCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence 9999999999754 35899999999999999999999 789999999999999988765 9999999998654221
Q ss_pred C-----CccccCCCcccccccccccCC-----CCCCcccchHHHHHHHHHHhCCCCCHHHHH-------HHHhh---cCC
Q 035917 478 E-----SSFVNGDLGEFGYIAPEYSST-----MVASLKGDVYGIGVVLLELAGFKGNLVDWV-------NQLSS---SGR 537 (611)
Q Consensus 478 ~-----~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~SfGvvl~ell~~~~~~~~~~-------~~~~~---~~~ 537 (611)
. ........||+.|+|||++.. ..++.++|||||||++|||++|+.||.... ..... ...
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 248 (316)
T 2ac3_A 169 DCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNM 248 (316)
T ss_dssp -------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHH
T ss_pred ccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHH
Confidence 1 111223459999999998864 458899999999999999999988873210 00000 000
Q ss_pred hhhhh-chhhc-----CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 538 SKEAI-DKALC-----GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 538 ~~~~~-~~~l~-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..+.+ ..... ....+.++.+ ++.+||+.||++|||+.|+++|
T Consensus 249 ~~~~i~~~~~~~~~~~~~~~~~~~~~---li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 249 LFESIQEGKYEFPDKDWAHISCAAKD---LISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHCCCCCCHHHHTTSCHHHHH---HHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHhccCcccCchhcccCCHHHHH---HHHHHhhCChhhCCCHHHHhcC
Confidence 00000 00000 0122334444 5559999999999999999986
No 172
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.7e-39 Score=340.83 Aligned_cols=264 Identities=20% Similarity=0.226 Sum_probs=197.5
Q ss_pred cHHHHHHhhhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccch------------hHHHHHHHHHHHhccCCCCcc
Q 035917 315 KLADLMAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKL------------GEKKFRNEMNRLGQLRHPNLA 382 (611)
Q Consensus 315 ~~~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~------------~~~~~~~Ev~~l~~l~H~nIv 382 (611)
.+.++....++|...+.||+|+||.||+|...+|+.||||++..... ..+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 45677888899999999999999999999988899999999854211 126799999999999999999
Q ss_pred ceeeEEEeC-----CeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC
Q 035917 383 PLLGYCVVE-----EEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD 457 (611)
Q Consensus 383 ~l~g~~~~~-----~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld 457 (611)
++++++... ...++||||++ |+|.+++......+++..+..++.|++.||.||| +.+|+||||||+|||++
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~ 168 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLA 168 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEC
T ss_pred ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEc
Confidence 999998653 35799999998 5999988866567999999999999999999999 78999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCCccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHH
Q 035917 458 EDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQ 531 (611)
Q Consensus 458 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~ 531 (611)
.++.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.. ....
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~ 245 (362)
T 3pg1_A 169 DNNDITICDFNLAREDTADAN---KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNK 245 (362)
T ss_dssp TTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHH
T ss_pred CCCCEEEEecCcccccccccc---cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 999999999999985533221 223468999999998876 6789999999999999999999887631 1111
Q ss_pred Hhh---cCChh-----------hhhchhh----------cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHH
Q 035917 532 LSS---SGRSK-----------EAIDKAL----------CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS--LNS 585 (611)
Q Consensus 532 ~~~---~~~~~-----------~~~~~~l----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~ 585 (611)
... ..... +.+.... .....++. +.+++.+||+.||++|||+.|+++| ++.
T Consensus 246 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 322 (362)
T 3pg1_A 246 IVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPV---ALDLIAKMLEFNPQRRISTEQALRHPYFES 322 (362)
T ss_dssp HHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHH---HHHHHHHHTCSSGGGSCCHHHHHTSGGGTT
T ss_pred HHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHH---HHHHHHHHhcCChhhCCCHHHHHcCchhhh
Confidence 100 00000 0000000 00112233 4455559999999999999999987 444
Q ss_pred chh
Q 035917 586 IAA 588 (611)
Q Consensus 586 i~~ 588 (611)
+..
T Consensus 323 ~~~ 325 (362)
T 3pg1_A 323 LFD 325 (362)
T ss_dssp TCC
T ss_pred ccC
Confidence 433
No 173
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=3.8e-40 Score=336.01 Aligned_cols=254 Identities=20% Similarity=0.289 Sum_probs=191.3
Q ss_pred hcCCCCCeeeecCCceEEEEEeC--CCC--EEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP--DGS--VLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKL 395 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~--~g~--~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~ 395 (611)
++|...+.||+|+||.||+|++. +++ .||||+++... ...+++.+|++++++++||||+++++++..++ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 46778899999999999999853 333 69999996532 23467999999999999999999999997654 88
Q ss_pred EEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
+||||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 173 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEccccccccccc
Confidence 999999999999999765456899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCCc-cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHH-----HHHHhhcCChhhhhchhhcC
Q 035917 476 SDESS-FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDW-----VNQLSSSGRSKEAIDKALCG 548 (611)
Q Consensus 476 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~ 548 (611)
..... ......+|..|+|||.+.+..++.++||||||+++|||++ |..||... ........ ......
T Consensus 174 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~------~~~~~~ 247 (291)
T 1u46_A 174 NDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG------ERLPRP 247 (291)
T ss_dssp -CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSC------CCCCCC
T ss_pred cccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccC------CCCCCC
Confidence 33211 1223457889999999988889999999999999999998 88887421 11111100 000111
Q ss_pred CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 549 KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 549 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
...++++.+ ++.+||+.||++|||+.+++++|+++....
T Consensus 248 ~~~~~~l~~---li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 248 EDCPQDIYN---VMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp TTCCHHHHH---HHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cCcCHHHHH---HHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 223444555 445999999999999999999999887654
No 174
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.4e-40 Score=342.81 Aligned_cols=257 Identities=16% Similarity=0.228 Sum_probs=192.5
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhH--HHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGE--KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~--~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
++|...+.||+|+||.||+|+.. +++.||||+++...... ..+.+|++++++++||||+++++++..++..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 45777889999999999999965 78999999996543222 2466899999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
++ |+|.+++......+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++...... .
T Consensus 82 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~ 155 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--K 155 (324)
T ss_dssp CS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--c
Confidence 97 5999998876667999999999999999999999 7899999999999999999999999999998654322 1
Q ss_pred cccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhh---c---CChhhhhch----
Q 035917 481 FVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSS---S---GRSKEAIDK---- 544 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~---~---~~~~~~~~~---- 544 (611)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||... ...... . .........
T Consensus 156 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T 3mtl_A 156 TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFK 235 (324)
T ss_dssp -------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHH
T ss_pred ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhc
Confidence 2233468999999998876 56899999999999999999998876321 111100 0 000000000
Q ss_pred -----h-------hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHchhh
Q 035917 545 -----A-------LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS--LNSIAAQ 589 (611)
Q Consensus 545 -----~-------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~~ 589 (611)
. ......++++.+ ++.+||+.||++|||+.|+++| +.++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~---li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~ 291 (324)
T 3mtl_A 236 TYNYPKYRAEALLSHAPRLDSDGAD---LLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291 (324)
T ss_dssp HTCCCCCCCCCHHHHCTTSCHHHHH---HHHHHSCSSGGGSCCHHHHTTSGGGGGGCST
T ss_pred ccccccccchhhhhhcCCCCHHHHH---HHHHHcCcCcccCCCHHHHhcChhhhhcccc
Confidence 0 000122344444 4559999999999999999986 5555444
No 175
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.3e-39 Score=336.13 Aligned_cols=250 Identities=20% Similarity=0.294 Sum_probs=195.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEecc
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKYM 401 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey~ 401 (611)
.+.|...+.||+|+||.||+|+.. +|+.||||.+.... ..+++.+|+.++.+++||||+++++++...+..++||||+
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 106 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC 106 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecC
Confidence 456888899999999999999965 59999999996533 3467899999999999999999999999999999999999
Q ss_pred CCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCcc
Q 035917 402 SSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSF 481 (611)
Q Consensus 402 ~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~ 481 (611)
++|+|.+++......+++..+..++.+++.||.||| +.+|+|+||||+||+++.++.+||+|||+++...... ..
T Consensus 107 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~ 181 (314)
T 3com_A 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM--AK 181 (314)
T ss_dssp TTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--SC
T ss_pred CCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--cc
Confidence 999999998744457999999999999999999999 7899999999999999999999999999998764322 11
Q ss_pred ccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cCCCCHHHHHHHHH
Q 035917 482 VNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CGKGYDEEILQFLK 560 (611)
Q Consensus 482 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~l~~ 560 (611)
.....||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... .......+.. .....++++.+++.
T Consensus 182 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~ 260 (314)
T 3com_A 182 RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIF-MIPTNPPPTFRKPELWSDNFTDFVK 260 (314)
T ss_dssp BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCCCSSGGGSCHHHHHHHH
T ss_pred cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHH-HHhcCCCcccCCcccCCHHHHHHHH
Confidence 233468999999999998899999999999999999999998874211000000 0000000000 01112344555544
Q ss_pred HHhhcccCCCCCCCCHHHHHHH
Q 035917 561 VACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 561 l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+||+.||++|||+.++++|
T Consensus 261 ---~~l~~dp~~Rpt~~~ll~~ 279 (314)
T 3com_A 261 ---QCLVKSPEQRATATQLLQH 279 (314)
T ss_dssp ---HHTCSCTTTSCCHHHHTTS
T ss_pred ---HHccCChhhCcCHHHHHhC
Confidence 9999999999999999875
No 176
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.9e-40 Score=345.82 Aligned_cols=195 Identities=19% Similarity=0.311 Sum_probs=170.8
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
++|...+.||+|+||.||+|+.. +++.||+|+++... ...+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46788899999999999999965 68999999996542 3346799999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
+++|+|.+++... ..+++..+..++.+++.||.|||+ ..+|+||||||+|||++.++.+||+|||+++......
T Consensus 113 ~~~~~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 186 (360)
T 3eqc_A 113 MDGGSLDQVLKKA-GRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 186 (360)
T ss_dssp CTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHHH--HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---
T ss_pred CCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH--hCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc---
Confidence 9999999999754 358999999999999999999993 2389999999999999999999999999997653221
Q ss_pred cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCH
Q 035917 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNL 525 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~ 525 (611)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 187 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 230 (360)
T 3eqc_A 187 -ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230 (360)
T ss_dssp -----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCS
T ss_pred -ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 12346899999999999999999999999999999999998876
No 177
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=6.6e-40 Score=362.95 Aligned_cols=250 Identities=18% Similarity=0.258 Sum_probs=202.2
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
.++|...++||+|+||.||+|+.. +|+.||||++.... .....+.+|+++|++++|||||++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888899999999999999964 79999999996532 2345688999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 398 YKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
|||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999997654 35999999999999999999999 789999999999999999999999999999876433
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhc--hhhcCCCCHHH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID--KALCGKGYDEE 554 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~ 554 (611)
.. ....+||+.|+|||++.+..++.++|||||||++|||++|..||....... ........+. +.......+.+
T Consensus 340 ~~---~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~i~~~~~~~p~~~s~~ 415 (576)
T 2acx_A 340 QT---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVKEVPEEYSERFSPQ 415 (576)
T ss_dssp CC---EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHHHHHCCCCCCTTSCHH
T ss_pred cc---ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHHhhcccccCCccCCHH
Confidence 21 233479999999999999899999999999999999999998874310000 0000000110 00112334556
Q ss_pred HHHHHHHHhhcccCCCCCCC-----CHHHHHHH
Q 035917 555 ILQFLKVACNCVVSRPKDRW-----SMYQVYQS 582 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~ 582 (611)
+.+++. +||+.||++|| ++.||++|
T Consensus 416 ~~dLI~---~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 416 ARSLCS---QLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp HHHHHH---HHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred HHHHHH---HhccCCHHHcCCCCCCCHHHHHhC
Confidence 666666 99999999999 78999877
No 178
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.8e-39 Score=330.44 Aligned_cols=244 Identities=19% Similarity=0.248 Sum_probs=198.7
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999965 57899999986432 22467899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 94 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~- 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKH-GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR- 168 (284)
T ss_dssp CCCTTEEHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC-
T ss_pred EeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc-
Confidence 999999999998754 35899999999999999999999 8899999999999999999999999999997654322
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cCCCCHHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CGKGYDEEILQ 557 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~ 557 (611)
.....|++.|+|||.+.+..++.++||||||+++|||++|..||........ ...+..... .....++++.+
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET----HRRIVNVDLKFPPFLSDGSKD 241 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTTCCCCCTTSCHHHHH
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH----HHHHhccccCCCCcCCHHHHH
Confidence 1234689999999999998999999999999999999999988732100000 000111000 11234455555
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 558 FLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++. +||+.||++||++.|+++|
T Consensus 242 li~---~~l~~~p~~Rps~~~ll~h 263 (284)
T 2vgo_A 242 LIS---KLLRYHPPQRLPLKGVMEH 263 (284)
T ss_dssp HHH---HHSCSSGGGSCCHHHHHTC
T ss_pred HHH---HHhhcCHhhCCCHHHHhhC
Confidence 555 9999999999999999986
No 179
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.5e-40 Score=349.35 Aligned_cols=198 Identities=20% Similarity=0.300 Sum_probs=160.3
Q ss_pred hhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEecccc---chhHHHHHHHHHHHhccC-CCCccceeeEEEeCC--ee
Q 035917 322 ASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTC---KLGEKKFRNEMNRLGQLR-HPNLAPLLGYCVVEE--EK 394 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~Ev~~l~~l~-H~nIv~l~g~~~~~~--~~ 394 (611)
..++|...+.||+|+||.||+|.. .+|+.||||++... ....+++.+|+.++.++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 456788889999999999999995 57999999998643 233467889999999997 999999999998654 68
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
++|||||+ |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 87 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 160 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN--ILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFV 160 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESS
T ss_pred EEEecccC-cCHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCccccccc
Confidence 99999998 5999998753 5899999999999999999999 7899999999999999999999999999998753
Q ss_pred CCC-------------------CCccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCH
Q 035917 475 SSD-------------------ESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNL 525 (611)
Q Consensus 475 ~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~ 525 (611)
... .....+..+||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 231 (388)
T 3oz6_A 161 NIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231 (388)
T ss_dssp SCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence 211 1112234579999999998876 67899999999999999999998876
No 180
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.8e-39 Score=341.74 Aligned_cols=251 Identities=18% Similarity=0.258 Sum_probs=198.3
Q ss_pred HHHhhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch---------hHHHHHHHHHHHhcc-CCCCccceeeE
Q 035917 319 LMAASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL---------GEKKFRNEMNRLGQL-RHPNLAPLLGY 387 (611)
Q Consensus 319 l~~~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---------~~~~~~~Ev~~l~~l-~H~nIv~l~g~ 387 (611)
.....++|...+.||+|+||.||+|+.. +|+.||||+++.... ..+.+.+|+.++.++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 3455678999999999999999999975 799999999854321 135688999999999 79999999999
Q ss_pred EEeCCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeec
Q 035917 388 CVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDF 467 (611)
Q Consensus 388 ~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DF 467 (611)
+...+..++||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~Df 244 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEK-VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDF 244 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCC
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEec
Confidence 99999999999999999999999754 35899999999999999999999 789999999999999999999999999
Q ss_pred ccccccCCCCCCccccCCCcccccccccccCC------CCCCcccchHHHHHHHHHHhCCCCCHHHHH----HHHhhcCC
Q 035917 468 GLAKLMTSSDESSFVNGDLGEFGYIAPEYSST------MVASLKGDVYGIGVVLLELAGFKGNLVDWV----NQLSSSGR 537 (611)
Q Consensus 468 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~ksDV~SfGvvl~ell~~~~~~~~~~----~~~~~~~~ 537 (611)
|++..+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|..||.... ........
T Consensus 245 G~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~ 321 (365)
T 2y7j_A 245 GFSCHLEPGEK---LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQ 321 (365)
T ss_dssp TTCEECCTTCC---BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred CcccccCCCcc---cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC
Confidence 99987654322 233569999999998753 358899999999999999999998873210 00000000
Q ss_pred hhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 538 SKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 538 ~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.. ...+ .....+.++.+ ++.+||+.||++|||+.|+++|
T Consensus 322 ~~-~~~~--~~~~~~~~~~~---li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 322 YQ-FSSP--EWDDRSSTVKD---LISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp CC-CCHH--HHSSSCHHHHH---HHHHHSCSSTTTSCCHHHHHHS
T ss_pred CC-CCCc--ccccCCHHHHH---HHHHHcCCChhHCcCHHHHhcC
Confidence 00 0000 00122334444 5559999999999999999875
No 181
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.7e-40 Score=343.91 Aligned_cols=244 Identities=16% Similarity=0.210 Sum_probs=195.2
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEEEEe
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
..++|...+.||+|+||.||+|+.. +|+.||||+++.... .+.+|++++.++ +||||+++++++.+++..++|||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~---~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR---DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC---CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC---ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 3467888899999999999999964 689999999965432 345788888888 79999999999999999999999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCC----CCeEEeecccccccCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED----FDARIMDFGLAKLMTS 475 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~----~~~kl~DFGla~~~~~ 475 (611)
|+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+|||+.++ +.+||+|||+++....
T Consensus 97 ~~~gg~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 97 LMKGGELLDKILRQ-KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCSCBHHHHHHTC-TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred CCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 99999999998755 46899999999999999999999 7899999999999998433 3599999999987643
Q ss_pred CCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhch------hhc--
Q 035917 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDK------ALC-- 547 (611)
Q Consensus 476 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~------~l~-- 547 (611)
... .....+||+.|+|||++.+..++.++|||||||++|||++|..||.... .....+.+.. ...
T Consensus 173 ~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~~~~i~~~~~~~~~~ 245 (342)
T 2qr7_A 173 ENG--LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP-----DDTPEEILARIGSGKFSLSGG 245 (342)
T ss_dssp TTC--CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST-----TSCHHHHHHHHHHCCCCCCST
T ss_pred CCC--ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC-----cCCHHHHHHHHccCCcccCcc
Confidence 321 2234568999999999988788999999999999999999998874200 0011111110 001
Q ss_pred -CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 548 -GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 548 -~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
....++++.++++ +||+.||++||++.|+++|
T Consensus 246 ~~~~~s~~~~~li~---~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 246 YWNSVSDTAKDLVS---KMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp TTTTSCHHHHHHHH---HHTCSSTTTSCCHHHHTTS
T ss_pred ccccCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 1234556666655 9999999999999999987
No 182
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.4e-40 Score=351.35 Aligned_cols=245 Identities=15% Similarity=0.156 Sum_probs=189.2
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEecccc----chhHHHHHHHH---HHHhccCCCCcccee-------eE
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTC----KLGEKKFRNEM---NRLGQLRHPNLAPLL-------GY 387 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~----~~~~~~~~~Ev---~~l~~l~H~nIv~l~-------g~ 387 (611)
.++|...+.||+|+||.||+|+. .+|+.||||+++.. ....+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46778889999999999999995 57999999999632 23457799999 556666899999998 66
Q ss_pred EEeCC-----------------eeEEEEeccCCCChHHhhhcCC------CCCCHHHHHHHHHHHHHHHHHHhhcCCCCe
Q 035917 388 CVVEE-----------------EKLLIYKYMSSGTLYSLLQGNA------TELDWPTRFRIGLGAARGLAWLHHGCQPPF 444 (611)
Q Consensus 388 ~~~~~-----------------~~~lv~ey~~~gsL~~~l~~~~------~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 444 (611)
+..++ ..++||||+ +|+|.+++.... ..+++..++.|+.||+.||+||| +.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 55543 278999999 679999997432 12446888999999999999999 7899
Q ss_pred eecCCCCCeEEeCCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCC-----------CCCcccchHHHHH
Q 035917 445 LHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTM-----------VASLKGDVYGIGV 513 (611)
Q Consensus 445 vHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~t~ksDV~SfGv 513 (611)
+||||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 9999999999999999999999999986422 2234467 999999999877 8999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHch
Q 035917 514 VLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS--LNSIA 587 (611)
Q Consensus 514 vl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~ 587 (611)
++|||++|+.||...... ........ .....++++.+++. +||+.||++|||+.|+++| ++++.
T Consensus 302 il~elltg~~Pf~~~~~~----~~~~~~~~---~~~~~~~~~~~li~---~~L~~dp~~Rpt~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 302 VIYWIWCADLPITKDAAL----GGSEWIFR---SCKNIPQPVRALLE---GFLRYPKEDRLLPLQAMETPEYEQLR 367 (377)
T ss_dssp HHHHHHHSSCCC----------CCSGGGGS---SCCCCCHHHHHHHH---HHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred HHHHHHHCCCCCcccccc----cchhhhhh---hccCCCHHHHHHHH---HHcCCCchhCCCHHHHhhChHHHHHH
Confidence 999999999998542211 11111111 11234455555555 9999999999999999975 44443
No 183
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.5e-39 Score=351.55 Aligned_cols=194 Identities=22% Similarity=0.260 Sum_probs=162.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEecccc---chhHHHHHHHHHHHhccCCCCccceeeEEEeC------C
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTC---KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE------E 392 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~---~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~------~ 392 (611)
.++|...+.||+|+||.||+|+. .+|+.||||++... ....+++.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 45788889999999999999985 46899999999653 23346789999999999999999999999654 3
Q ss_pred eeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
..++||||+++ +|.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~---~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred eEEEEEeCCCC-CHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 56999999986 57777753 3899999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHH
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLV 526 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~ 526 (611)
..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 214 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~ 264 (464)
T 3ttj_A 214 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFP 264 (464)
T ss_dssp ---CC---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCCc---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCC
Confidence 64322 2234579999999999999999999999999999999999988763
No 184
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=9.8e-40 Score=340.09 Aligned_cols=252 Identities=18% Similarity=0.179 Sum_probs=187.1
Q ss_pred HhhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchh---HHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 321 AASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLG---EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 321 ~~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~---~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
...++|...+.||+|+||.||+|+. .+++.||||+++..... .+.+.+|++++++++||||+++++++..++..++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 4456888999999999999999995 57899999999654322 3567899999999999999999999999999999
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe-----CCCCCeEEeeccccc
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV-----DEDFDARIMDFGLAK 471 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl-----d~~~~~kl~DFGla~ 471 (611)
||||+++ +|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||+ +.++.+||+|||+++
T Consensus 111 v~e~~~~-~L~~~~~~~-~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 111 IFEYAEN-DLKKYMDKN-PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEECCSE-EHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEecCCC-CHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 9999985 999999765 35899999999999999999999 7899999999999999 455569999999998
Q ss_pred ccCCCCCCccccCCCcccccccccccCCC-CCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhc-CC-----hh
Q 035917 472 LMTSSDESSFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSS-GR-----SK 539 (611)
Q Consensus 472 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~-~~-----~~ 539 (611)
...... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||... ....... +. ..
T Consensus 186 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 186 AFGIPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred ccCCcc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence 764322 122334689999999998764 4899999999999999999998876321 1111000 00 00
Q ss_pred hhh--------chhhcC--------CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 540 EAI--------DKALCG--------KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 540 ~~~--------~~~l~~--------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
... .+.... ...++++ .+++.+||+.||++|||+.|+++|
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~L~~dP~~R~t~~e~l~h 319 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEG---LDLLTAMLEMDPVKRISAKNALEH 319 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHH---HHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHH---HHHHHHHccCChhhCCCHHHHhCC
Confidence 000 000000 0123344 445559999999999999999875
No 185
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.2e-39 Score=333.13 Aligned_cols=246 Identities=18% Similarity=0.253 Sum_probs=195.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
.+.|...+.||+|+||.||+|+.. +|+.||+|+++... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 356888899999999999999964 79999999997543 2346789999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe---CCCCCeEEeecccccccCCCC
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV---DEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---d~~~~~kl~DFGla~~~~~~~ 477 (611)
+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||+++......
T Consensus 88 ~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 163 (304)
T 2jam_A 88 VSGGELFDRILER-GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163 (304)
T ss_dssp CCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT
T ss_pred CCCccHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc
Confidence 9999999988654 35899999999999999999999 7899999999999999 788999999999997643221
Q ss_pred CCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHH----HhhcCChhhhhchhhcCCCCHH
Q 035917 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQ----LSSSGRSKEAIDKALCGKGYDE 553 (611)
Q Consensus 478 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~ 553 (611)
. ....||+.|+|||.+.+..++.++|||||||++|||++|..||...... ....+... .. .......++
T Consensus 164 ~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--~~-~~~~~~~~~ 236 (304)
T 2jam_A 164 M----STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYE--FE-SPFWDDISE 236 (304)
T ss_dssp T----HHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCC--CC-TTTTTTSCH
T ss_pred c----ccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC--CC-ccccccCCH
Confidence 1 1224899999999999999999999999999999999999887421110 00000000 00 001122344
Q ss_pred HHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 554 EILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 554 ~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++.+++. +||+.||++|||+.|+++|
T Consensus 237 ~~~~li~---~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 237 SAKDFIC---HLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp HHHHHHH---HHHCSSTTTSCCHHHHHTS
T ss_pred HHHHHHH---HHcCCChhHCcCHHHHhcC
Confidence 5555555 9999999999999999986
No 186
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.9e-39 Score=339.30 Aligned_cols=255 Identities=18% Similarity=0.236 Sum_probs=194.5
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEe--------C
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVV--------E 391 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~--------~ 391 (611)
++|...+.||+|+||.||+|+. .+|+.||||++.... .....+.+|++++++++||||+++++++.. .
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 5788889999999999999996 579999999985432 223578899999999999999999999987 3
Q ss_pred CeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeeccccc
Q 035917 392 EEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAK 471 (611)
Q Consensus 392 ~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~ 471 (611)
+..++||||+++ +|.+.+......+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred ceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 468999999985 888888766567999999999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCC--CCccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhh-cCCh-hhh
Q 035917 472 LMTSSD--ESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSS-SGRS-KEA 541 (611)
Q Consensus 472 ~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~-~~~~-~~~ 541 (611)
.+.... .........||+.|+|||++.+ ..++.++|||||||++|||++|+.||... ...... .+.. .+.
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEV 252 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTT
T ss_pred cccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhh
Confidence 764322 1122234568999999998876 45799999999999999999998876321 000000 0000 000
Q ss_pred ---hc-hhh--------c-CCCCHHHH------HHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 542 ---ID-KAL--------C-GKGYDEEI------LQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 542 ---~~-~~l--------~-~~~~~~~~------~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.+ ... . .....+.+ ..+.+++.+||+.||++|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 00 000 0 00011111 235556669999999999999999987
No 187
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1e-39 Score=351.40 Aligned_cols=246 Identities=18% Similarity=0.267 Sum_probs=186.6
Q ss_pred hhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch---------hHHHHHHHHHHHhccCCCCccceeeEEEeC
Q 035917 322 ASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL---------GEKKFRNEMNRLGQLRHPNLAPLLGYCVVE 391 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~---------~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~ 391 (611)
..++|...+.||+|+||.||+|.. .+++.||||++..... ....+.+|+.+|++++||||+++++++. .
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~ 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-A 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-S
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-c
Confidence 456888899999999999999995 4689999999865321 1124889999999999999999999975 5
Q ss_pred CeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCC---CCeEEeecc
Q 035917 392 EEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED---FDARIMDFG 468 (611)
Q Consensus 392 ~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~---~~~kl~DFG 468 (611)
+..++||||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.+ +.+||+|||
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSS-CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred CceEEEEEcCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecc
Confidence 5689999999999999998754 46999999999999999999999 7899999999999999654 459999999
Q ss_pred cccccCCCCCCccccCCCcccccccccccCC---CCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh
Q 035917 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSST---MVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA 545 (611)
Q Consensus 469 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (611)
+++...... ......||+.|+|||++.+ ..++.++|||||||++|||++|..||.... ......+.+...
T Consensus 288 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~----~~~~~~~~i~~~ 360 (419)
T 3i6u_A 288 HSKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR----TQVSLKDQITSG 360 (419)
T ss_dssp TTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCS----SSCCHHHHHHTT
T ss_pred cceecCCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCc----chHHHHHHHhcC
Confidence 998764322 2233469999999999853 568899999999999999999998874210 000111111110
Q ss_pred hcC------CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 546 LCG------KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 546 l~~------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
... ...++++. +++.+||+.||++|||+.|+++|
T Consensus 361 ~~~~~~~~~~~~~~~~~---~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 361 KYNFIPEVWAEVSEKAL---DLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCCCCHHHHTTSCHHHH---HHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCCchhhcccCHHHH---HHHHHHccCChhHCcCHHHHhCC
Confidence 000 11233444 45559999999999999999986
No 188
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.6e-39 Score=330.47 Aligned_cols=249 Identities=20% Similarity=0.263 Sum_probs=200.7
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
+.|...+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 4577788999999999999985 468999999996532 3457899999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
+++++|.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 102 ~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 174 (303)
T 3a7i_A 102 LGGGSALDLLEP--GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-- 174 (303)
T ss_dssp CTTEEHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--
T ss_pred CCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCcccc--
Confidence 999999999874 35899999999999999999999 78999999999999999999999999999987643221
Q ss_pred cccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHHHHHHH
Q 035917 481 FVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEILQFLK 560 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~ 560 (611)
......||+.|+|||.+.+..++.++||||||+++|||++|+.|+.......... .......+. .....+.++.+++.
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~l~~li~ 252 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLF-LIPKNNPPT-LEGNYSKPLKEFVE 252 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH-HHHHSCCCC-CCSSCCHHHHHHHH
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHH-HhhcCCCCC-CccccCHHHHHHHH
Confidence 1233468999999999999899999999999999999999998864211000000 000000111 11233455555555
Q ss_pred HHhhcccCCCCCCCCHHHHHHHHH
Q 035917 561 VACNCVVSRPKDRWSMYQVYQSLN 584 (611)
Q Consensus 561 l~~~Cl~~dP~~RPs~~evl~~L~ 584 (611)
+||+.||++|||+.|++++.-
T Consensus 253 ---~~l~~dp~~Rps~~~ll~~~~ 273 (303)
T 3a7i_A 253 ---ACLNKEPSFRPTAKELLKHKF 273 (303)
T ss_dssp ---HHCCSSGGGSCCHHHHTTCHH
T ss_pred ---HHcCCChhhCcCHHHHhhChh
Confidence 999999999999999998743
No 189
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1e-39 Score=334.55 Aligned_cols=254 Identities=22% Similarity=0.338 Sum_probs=180.2
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+++.+|+.++++++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 45788889999999999999995 478999999986532 334678999999999999999999999999999999999
Q ss_pred ccCCCChHHhhhc-------CCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 400 YMSSGTLYSLLQG-------NATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 400 y~~~gsL~~~l~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
|+++|+|.+++.. ....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999863 2246899999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCC---CccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHHHHH-----HHhhcC--Chhhh
Q 035917 473 MTSSDE---SSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVDWVN-----QLSSSG--RSKEA 541 (611)
Q Consensus 473 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~-----~~~~~~--~~~~~ 541 (611)
...... ........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||..... ...... .....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 250 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccc
Confidence 643221 111223468999999998865 5689999999999999999999988743110 000000 00000
Q ss_pred hchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 542 IDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 542 ~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..........++++.+++. +||+.||++||++.|+++|
T Consensus 251 ~~~~~~~~~~~~~~~~li~---~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 251 VQDKEMLKKYGKSFRKMIS---LCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp ----CCCCCCCHHHHHHHH---HHCCSSGGGSCCHHHHHTS
T ss_pred cccchhhhhhhHHHHHHHH---HHccCChhhCcCHHHHhhC
Confidence 0000011223444555554 9999999999999999875
No 190
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6e-40 Score=336.59 Aligned_cols=247 Identities=19% Similarity=0.271 Sum_probs=192.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEec
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
.+.|...+.||+|+||.||+|+.. +++.||+|++.... ...+++.+|+.++++++||||+++++++..++..++||||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 356778899999999999999975 58999999986543 3457899999999999999999999999999999999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCc
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESS 480 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~ 480 (611)
+++++|.+++......+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++....... .
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 172 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--Q 172 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--H
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc--c
Confidence 9999999998765456999999999999999999999 7899999999999999999999999999976432110 1
Q ss_pred cccCCCccccccccccc-----CCCCCCcccchHHHHHHHHHHhCCCCCHHHHH-----HHHhhcCChhhhhchhhcCCC
Q 035917 481 FVNGDLGEFGYIAPEYS-----STMVASLKGDVYGIGVVLLELAGFKGNLVDWV-----NQLSSSGRSKEAIDKALCGKG 550 (611)
Q Consensus 481 ~~~~~~gt~~y~aPE~~-----~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~ 550 (611)
......||+.|+|||++ ....++.++||||||+++|||++|+.|+.... ........ ........
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 247 (302)
T 2j7t_A 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDP-----PTLLTPSK 247 (302)
T ss_dssp C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC-----CCCSSGGG
T ss_pred ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCC-----cccCCccc
Confidence 11223589999999987 46678999999999999999999998864211 11111100 00001112
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.+.++.+++. +||+.||++|||+.|+++|
T Consensus 248 ~~~~l~~li~---~~l~~dp~~Rps~~~ll~h 276 (302)
T 2j7t_A 248 WSVEFRDFLK---IALDKNPETRPSAAQLLEH 276 (302)
T ss_dssp SCHHHHHHHH---HHSCSCTTTSCCHHHHTTS
T ss_pred cCHHHHHHHH---HHcccChhhCCCHHHHhcC
Confidence 3344555554 9999999999999999875
No 191
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=4.5e-40 Score=343.81 Aligned_cols=248 Identities=18% Similarity=0.309 Sum_probs=192.3
Q ss_pred hhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc--hhHHHHHHHHHH-HhccCCCCccceeeEEEeCCeeEEE
Q 035917 322 ASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK--LGEKKFRNEMNR-LGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~Ev~~-l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
..++|...+.||+|+||.||+|+. .+|+.||||+++... ....++..|+.+ ++.++||||+++++++..++..++|
T Consensus 49 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 49 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp CSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred ehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 345677788999999999999995 579999999997543 234456666665 7888999999999999999999999
Q ss_pred EeccCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeecCCCCCeEEeCCCCCeEEeeccccccc
Q 035917 398 YKYMSSGTLYSLLQG---NATELDWPTRFRIGLGAARGLAWLHHGCQP-PFLHQNICSNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NILld~~~~~kl~DFGla~~~ 473 (611)
|||+++ +|.+++.. ....+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||+|||+++..
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999985 99888763 3357999999999999999999999 54 9999999999999999999999999999876
Q ss_pred CCCCCCccccCCCcccccccccccC----CCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhh---chhh
Q 035917 474 TSSDESSFVNGDLGEFGYIAPEYSS----TMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAI---DKAL 546 (611)
Q Consensus 474 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~---~~~l 546 (611)
.... ......||+.|+|||++. ...++.++|||||||++|||++|+.||..+..... .....+ .+..
T Consensus 205 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~---~~~~~~~~~~~~~ 278 (340)
T 3an0_A 205 VDSV---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ---QLKQVVEEPSPQL 278 (340)
T ss_dssp SCHH---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH---HHHHHHHSCCCCC
T ss_pred cccc---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH---HHHHHhcCCCCCC
Confidence 4321 112236999999999864 34789999999999999999999988742110000 000111 1111
Q ss_pred cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 547 CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 547 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.....+.++.+ ++.+||+.||++||++.|++++
T Consensus 279 ~~~~~~~~~~~---li~~~l~~dp~~Rps~~ell~h 311 (340)
T 3an0_A 279 PADKFSAEFVD---FTSQCLKKNSKERPTYPELMQH 311 (340)
T ss_dssp CGGGSCHHHHH---HHHHHTCSSGGGSCCHHHHTTS
T ss_pred CcccCCHHHHH---HHHHHccCCcccCcCHHHHhcC
Confidence 11123344445 4559999999999999999986
No 192
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=1.2e-39 Score=345.30 Aligned_cols=242 Identities=21% Similarity=0.207 Sum_probs=187.2
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch----hHHHHHHHHHH-HhccCCCCccceeeEEEeCCeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL----GEKKFRNEMNR-LGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~Ev~~-l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
.++|...+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 357888899999999999999964 588999999965432 23456777776 577899999999999999999999
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++... ..+++..+..++.+|+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 117 v~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE-RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 99999999999999754 35889999999999999999999 789999999999999999999999999999864322
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-cCCCCHHHH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-CGKGYDEEI 555 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~ 555 (611)
. ......+||+.|+|||++.+..++.++|||||||++|||++|..||....... ....++.... .....+.++
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~ 266 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE----MYDNILNKPLQLKPNITNSA 266 (373)
T ss_dssp C--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHH----HHHHHHHSCCCCCSSSCHHH
T ss_pred C--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH----HHHHHHhcccCCCCCCCHHH
Confidence 2 12234479999999999999999999999999999999999998873210000 0001111111 122345566
Q ss_pred HHHHHHHhhcccCCCCCCCCHH
Q 035917 556 LQFLKVACNCVVSRPKDRWSMY 577 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~ 577 (611)
.++++ +||+.||++||++.
T Consensus 267 ~~li~---~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 267 RHLLE---GLLQKDRTKRLGAK 285 (373)
T ss_dssp HHHHH---HHTCSSGGGSTTTT
T ss_pred HHHHH---HHcccCHHhCCCCC
Confidence 66666 99999999999974
No 193
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=327.35 Aligned_cols=249 Identities=17% Similarity=0.211 Sum_probs=193.5
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc-----hhHHHHHHHHHHHhccCCCCccceeeEEE--eCCee
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQLRHPNLAPLLGYCV--VEEEK 394 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~-----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~--~~~~~ 394 (611)
.++|...+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|++++++++||||+++++++. +.+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 36799999999999999999996 468999999996542 23467999999999999999999999985 34578
Q ss_pred EEEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeeccccccc
Q 035917 395 LLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~ 473 (611)
++||||+++| |.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999886 777775432 46999999999999999999999 789999999999999999999999999999876
Q ss_pred CCCCCCccccCCCcccccccccccCCCC--CCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCC
Q 035917 474 TSSDESSFVNGDLGEFGYIAPEYSSTMV--ASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKG 550 (611)
Q Consensus 474 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~ 550 (611)
.............||+.|+|||++.+.. ++.++||||||+++|||++|+.||........ ...+.... .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~i~~~~~~~~~~ 235 (305)
T 2wtk_C 160 HPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKL----FENIGKGSYAIPGD 235 (305)
T ss_dssp CTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH----HHHHHHCCCCCCSS
T ss_pred CccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHH----HHHHhcCCCCCCCc
Confidence 5433333334456999999999987643 47899999999999999999888632100000 00000000 01122
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.++++.++++ +||+.||++|||+.|+++|
T Consensus 236 ~~~~l~~li~---~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 236 CGPPLSDLLK---GMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp SCHHHHHHHH---HHTCSSTTTSCCHHHHHHS
T ss_pred cCHHHHHHHH---HHccCChhhCCCHHHHhcC
Confidence 3445555555 9999999999999999987
No 194
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.5e-39 Score=323.65 Aligned_cols=244 Identities=19% Similarity=0.268 Sum_probs=189.7
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|+.++++++||||+++++++..++..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 46777899999999999999975 79999999996532 22467899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++++|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 91 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 166 (276)
T 2h6d_A 91 EYVSGGELFDYICKH-GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF 166 (276)
T ss_dssp ECCCSCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred eccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc
Confidence 999999999999754 35899999999999999999999 78999999999999999999999999999987643221
Q ss_pred CccccCCCcccccccccccCCCCC-CcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh--hcCCCCHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVA-SLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA--LCGKGYDEEI 555 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~ 555 (611)
.....||+.|+|||.+.+..+ +.++||||||+++|||++|+.||....... ..+.+... ......+.++
T Consensus 167 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l 238 (276)
T 2h6d_A 167 ---LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPT-----LFKKIRGGVFYIPEYLNRSV 238 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-----HHHHHHHCCCCCCTTSCHHH
T ss_pred ---eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-----HHHHhhcCcccCchhcCHHH
Confidence 223458999999999987765 689999999999999999988763210000 00000000 0122234455
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 556 LQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.+++. +||+.||++|||+.|+++|
T Consensus 239 ~~li~---~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 239 ATLLM---HMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp HHHHH---HHTCSSGGGSCCHHHHHHS
T ss_pred HHHHH---HHccCChhhCCCHHHHHhC
Confidence 55555 9999999999999999986
No 195
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.1e-38 Score=348.34 Aligned_cols=262 Identities=18% Similarity=0.192 Sum_probs=203.8
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccCC-CCccceeeEEEeCCeeEEEEec
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH-PNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H-~nIv~l~g~~~~~~~~~lv~ey 400 (611)
.++|...+.||+|+||.||+|+. .+++.||||+++... ..+++.+|++++..++| ++|..+..++...+..++||||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~ 84 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDL 84 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEEC
Confidence 35788899999999999999995 679999999875432 22458899999999987 5566666666778888999999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe---CCCCCeEEeecccccccCCCC
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV---DEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---d~~~~~kl~DFGla~~~~~~~ 477 (611)
+ +++|.+++......+++..++.|+.||+.||+||| +.+|+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 85 ~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 85 L-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp C-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred C-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 9 89999999865567999999999999999999999 7899999999999999 588999999999998765433
Q ss_pred CC-----ccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh------
Q 035917 478 ES-----SFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL------ 546 (611)
Q Consensus 478 ~~-----~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l------ 546 (611)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ......+....+
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-HHHHHHHHHHHHHSCHHH
T ss_pred cccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-HHHHHHHhhccccccHHH
Confidence 21 112245799999999999999999999999999999999999988743100000 000000000000
Q ss_pred cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCCC
Q 035917 547 CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGFS 593 (611)
Q Consensus 547 ~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~~ 593 (611)
.....++++.+ ++.+||+.||++||++.+|++.|+++....+..
T Consensus 240 l~~~~p~~l~~---li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~ 283 (483)
T 3sv0_A 240 LCRGYPTEFAS---YFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQ 283 (483)
T ss_dssp HHTTSCHHHHH---HHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCC
T ss_pred HhcCCcHHHHH---HHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCC
Confidence 00223344444 555999999999999999999999998876544
No 196
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.5e-40 Score=339.53 Aligned_cols=260 Identities=20% Similarity=0.271 Sum_probs=195.3
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
.++|...+.||+|+||.||+|+..+ .||+|+++... ...+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 4578888999999999999999754 49999986532 223568899999999999999999999999999999999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC--
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD-- 477 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~-- 477 (611)
|+++++|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++ ++.+||+|||+++......
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp CCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCSCCC--------
T ss_pred cccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecCCcccccccccc
Confidence 99999999999876557999999999999999999999 78999999999999998 6799999999987653211
Q ss_pred -CCccccCCCcccccccccccCC---------CCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhc
Q 035917 478 -ESSFVNGDLGEFGYIAPEYSST---------MVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALC 547 (611)
Q Consensus 478 -~~~~~~~~~gt~~y~aPE~~~~---------~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 547 (611)
.........||+.|+|||.+.. ..++.++|||||||++|||++|+.||.......... .......+...
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~-~~~~~~~~~~~ 264 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIW-QMGTGMKPNLS 264 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHH-HHHTTCCCCCC
T ss_pred ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HhccCCCCCCC
Confidence 1112233458999999998764 457899999999999999999988863211000000 00001111121
Q ss_pred CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhCC
Q 035917 548 GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHGF 592 (611)
Q Consensus 548 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~~ 592 (611)
....+.++.+++. +||+.||++|||+.++++.|+++.++...
T Consensus 265 ~~~~~~~l~~li~---~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 265 QIGMGKEISDILL---FCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp CSSCCTTHHHHHH---HHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred cCCCCHHHHHHHH---HHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 2223444555554 99999999999999999999999887543
No 197
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.6e-39 Score=356.55 Aligned_cols=245 Identities=21% Similarity=0.289 Sum_probs=198.3
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEecccc----chhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTC----KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~----~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
.+.|...+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356888899999999999999965 7999999998543 23457899999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe---CCCCCeEEeecccccccC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV---DEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---d~~~~~kl~DFGla~~~~ 474 (611)
|||+.+|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||+ +.++.+||+|||+++...
T Consensus 105 ~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 105 GEVYTGGELFDEIISR-KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp ECCCCSCBHHHHHHTC-SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 9999999999998754 46899999999999999999999 7899999999999999 567899999999998765
Q ss_pred CCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCC
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGK 549 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~ 549 (611)
.... .....||+.|+|||++.+ .++.++|||||||++|||++|..||... ..... .+...- . .....
T Consensus 181 ~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~-~~~~~~--~-~~~~~ 252 (484)
T 3nyv_A 181 ASKK---MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE-KGKYTF--E-LPQWK 252 (484)
T ss_dssp CCCS---HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCCCC--C-SGGGG
T ss_pred cccc---cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-cCCCCC--C-Ccccc
Confidence 4332 222369999999999876 6899999999999999999999887321 11111 110000 0 00001
Q ss_pred CCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 550 GYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 550 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..++++.+++. +||+.||++|||+.|+++|
T Consensus 253 ~~s~~~~~li~---~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 253 KVSESAKDLIR---KMLTYVPSMRISARDALDH 282 (484)
T ss_dssp GSCHHHHHHHH---HHTCSSGGGSCCHHHHHTS
T ss_pred cCCHHHHHHHH---HHCCCChhHCcCHHHHhhC
Confidence 23455555555 9999999999999999987
No 198
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.5e-39 Score=357.25 Aligned_cols=247 Identities=19% Similarity=0.260 Sum_probs=200.3
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
++|...++||+|+||.||+|+.. +|+.||||+++... ...+.+.+|+.++++++||||+++++++...+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56788889999999999999974 69999999996532 23467899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCC---CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 399 KYMSSGTLYSLLQGNA---TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~---~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999987542 36999999999999999999999 78999999999999999999999999999987643
Q ss_pred CCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhh----chh-hcCCC
Q 035917 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAI----DKA-LCGKG 550 (611)
Q Consensus 476 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~----~~~-l~~~~ 550 (611)
... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.... ......+.. ... ..+..
T Consensus 342 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~----~~~~~~~~~~~i~~~~~~~p~~ 415 (543)
T 3c4z_A 342 GQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG----EKVENKELKQRVLEQAVTYPDK 415 (543)
T ss_dssp TCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT----CCCCHHHHHHHHHHCCCCCCTT
T ss_pred CCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc----cchhHHHHHHHHhhcccCCCcc
Confidence 321 1233479999999999999999999999999999999999998874210 000001111 111 11233
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCH-----HHHHHH
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSM-----YQVYQS 582 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~-----~evl~~ 582 (611)
.+.++.+++. +||+.||++||++ .+|++|
T Consensus 416 ~s~~~~~li~---~lL~~dP~~R~~~~~~~a~ei~~H 449 (543)
T 3c4z_A 416 FSPASKDFCE---ALLQKDPEKRLGFRDGSCDGLRTH 449 (543)
T ss_dssp SCHHHHHHHH---HHSCSSGGGSCCCBTTBSHHHHTS
T ss_pred cCHHHHHHHH---HhccCCHhHCCCCcccCHHHHHcC
Confidence 4556666665 9999999999964 777765
No 199
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.6e-39 Score=329.01 Aligned_cols=247 Identities=17% Similarity=0.194 Sum_probs=199.2
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
+.|...+.||+|+||.||+|... +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 56778899999999999999965 58899999986532 23467899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++++|.+++... ..+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 95 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 95 ELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp ECCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred ecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 999999999988654 35899999999999999999999 78999999999999999999999999999987643221
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEILQ 557 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~ 557 (611)
......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ........ ......+.++.+
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 244 (294)
T 2rku_A 171 --RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKNEYSIPKHINPVAAS 244 (294)
T ss_dssp --CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHTTCCCCCTTSCHHHHH
T ss_pred --ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH----HHHHhhccCCCccccCHHHHH
Confidence 12234689999999999988899999999999999999999888632100000 00000000 011233445555
Q ss_pred HHHHHhhcccCCCCCCCCHHHHHHHH
Q 035917 558 FLKVACNCVVSRPKDRWSMYQVYQSL 583 (611)
Q Consensus 558 l~~l~~~Cl~~dP~~RPs~~evl~~L 583 (611)
++. +||+.||++|||+.|++++-
T Consensus 245 li~---~~l~~~p~~Rps~~~ll~~~ 267 (294)
T 2rku_A 245 LIQ---KMLQTDPTARPTINELLNDE 267 (294)
T ss_dssp HHH---HHTCSSGGGSCCGGGGGGSH
T ss_pred HHH---HHcccChhhCcCHHHHhhCh
Confidence 555 99999999999999999873
No 200
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=6.7e-39 Score=333.91 Aligned_cols=250 Identities=20% Similarity=0.246 Sum_probs=191.0
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch---hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL---GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~---~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
++|...+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 46778899999999999999965 589999999854332 24568899999999999999999999999999999999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES 479 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~ 479 (611)
|+++++|.+++... ..+++..+..++.+++.||.||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 105 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 179 (331)
T 4aaa_A 105 FVDHTILDDLELFP-NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 179 (331)
T ss_dssp CCSEEHHHHHHHST-TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred cCCcchHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-
Confidence 99999998887644 35999999999999999999999 78999999999999999999999999999986643221
Q ss_pred ccccCCCcccccccccccCCC-CCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHh-hcCC--------------h
Q 035917 480 SFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLS-SSGR--------------S 538 (611)
Q Consensus 480 ~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~-~~~~--------------~ 538 (611)
......||+.|+|||++.+. .++.++|||||||++|||++|+.||... ..... ..+. .
T Consensus 180 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (331)
T 4aaa_A 180 -VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGG
T ss_pred -ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcccc
Confidence 12334689999999998765 7899999999999999999998876311 00000 0000 0
Q ss_pred hhhhchhhc--------CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 539 KEAIDKALC--------GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 539 ~~~~~~~l~--------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.....+.+. ....+++ +.+++.+||+.||++|||+.|+++|
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~---l~~li~~~L~~dP~~Rpt~~ell~h 307 (331)
T 4aaa_A 259 AGVRLPEIKEREPLERRYPKLSEV---VIDLAKKCLHIDPDKRPFCAELLHH 307 (331)
T ss_dssp TTCCCCCCSSCCCHHHHSTTSCHH---HHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred ccccCccccccchhhhcccchhHH---HHHHHHHHhccCcccCCCHHHHhcC
Confidence 000000000 0122344 4445559999999999999999986
No 201
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.8e-39 Score=336.41 Aligned_cols=254 Identities=19% Similarity=0.226 Sum_probs=196.3
Q ss_pred HHhhhcCCCC-CeeeecCCceEEEEEeC-CCCEEEEEeccccc---hhHHHHHHHHHHHhccC-CCCccceeeEEEeCCe
Q 035917 320 MAASNSFCSE-NVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLR-HPNLAPLLGYCVVEEE 393 (611)
Q Consensus 320 ~~~t~~f~~~-~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~-H~nIv~l~g~~~~~~~ 393 (611)
....+.|... +.||+|+||.||+|+.. +++.||||+++... ....++.+|+.++.+++ ||||+++++++...+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3444556655 78999999999999964 69999999996532 33578999999999995 6999999999999999
Q ss_pred eEEEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC---CCCeEEeeccc
Q 035917 394 KLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE---DFDARIMDFGL 469 (611)
Q Consensus 394 ~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~---~~~~kl~DFGl 469 (611)
.++||||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++. ++.+||+|||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 999999999999999986543 47999999999999999999999 789999999999999997 78999999999
Q ss_pred ccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhc-hhhcC
Q 035917 470 AKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID-KALCG 548 (611)
Q Consensus 470 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ 548 (611)
++....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.................+ +....
T Consensus 181 a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 257 (327)
T 3lm5_A 181 SRKIGHACE---LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETF 257 (327)
T ss_dssp CEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTT
T ss_pred ccccCCccc---cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhh
Confidence 987643321 22346999999999999999999999999999999999999887321100000000000000 00011
Q ss_pred CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 549 KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 549 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
...++++.+++. +||+.||++|||+.|+++|
T Consensus 258 ~~~~~~~~~li~---~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 258 SSVSQLATDFIQ---SLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp TTSCHHHHHHHH---HHSCSSGGGSCCHHHHTTC
T ss_pred cccCHHHHHHHH---HHcCCChhhCcCHHHHhCC
Confidence 123445555555 9999999999999999886
No 202
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4.2e-39 Score=347.70 Aligned_cols=194 Identities=20% Similarity=0.210 Sum_probs=170.3
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhcc------CCCCccceeeEEEeCCeeE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQL------RHPNLAPLLGYCVVEEEKL 395 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l------~H~nIv~l~g~~~~~~~~~ 395 (611)
...|...+.||+|+||.||+|+.. +++.||||+++......+++.+|+++++.+ +|+||+++++++...+..+
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 346788899999999999999854 589999999987665567788899988887 5779999999999999999
Q ss_pred EEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC--eEEeecccccc
Q 035917 396 LIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD--ARIMDFGLAKL 472 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~--~kl~DFGla~~ 472 (611)
+||||+. ++|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++. +||+|||+++.
T Consensus 176 lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~ 251 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCY 251 (429)
T ss_dssp EEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeeccccee
Confidence 9999996 59999987654 36999999999999999999999 789999999999999999887 99999999976
Q ss_pred cCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCH
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNL 525 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~ 525 (611)
.... .....||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 252 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf 299 (429)
T 3kvw_A 252 EHQR-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299 (429)
T ss_dssp TTCC-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cCCc-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence 5322 22346899999999999989999999999999999999998776
No 203
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.9e-39 Score=337.42 Aligned_cols=247 Identities=17% Similarity=0.197 Sum_probs=199.5
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
.+.|...+.||+|+||.||+++.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888899999999999999965 58899999986532 2346789999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
|||+++++|.+++... ..+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 120 ~e~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 120 LELCRRRSLLELHKRR-KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp ECCCTTCBHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EecCCCCCHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999999988654 35899999999999999999999 7899999999999999999999999999998764322
Q ss_pred CCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHHH
Q 035917 478 ESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEIL 556 (611)
Q Consensus 478 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~~ 556 (611)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ........ ......+.++.
T Consensus 196 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 269 (335)
T 2owb_A 196 E--RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET----YLRIKKNEYSIPKHINPVAA 269 (335)
T ss_dssp C--CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH----HHHHHHTCCCCCTTSCHHHH
T ss_pred c--cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH----HHHHhcCCCCCCccCCHHHH
Confidence 1 12334699999999999888899999999999999999999888632100000 00000000 01123344555
Q ss_pred HHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 557 QFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 557 ~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++++ +||+.||++||++.|++++
T Consensus 270 ~li~---~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 270 SLIQ---KMLQTDPTARPTINELLND 292 (335)
T ss_dssp HHHH---HHTCSSGGGSCCGGGGGGS
T ss_pred HHHH---HHccCChhHCcCHHHHhcC
Confidence 5555 9999999999999999986
No 204
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=4.2e-39 Score=353.36 Aligned_cols=245 Identities=19% Similarity=0.284 Sum_probs=196.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEecccc---chhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTC---KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~---~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
.+.|...+.||+|+||.||+|+.. +++.||||++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 356888899999999999999964 7999999998542 234577999999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC---CCCCeEEeecccccccCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD---EDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld---~~~~~kl~DFGla~~~~~ 475 (611)
|||++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++ .++.+||+|||+++....
T Consensus 101 e~~~~~~L~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp CCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EcCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 999999999988654 35899999999999999999999 78999999999999995 456799999999987643
Q ss_pred CCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCCC
Q 035917 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGKG 550 (611)
Q Consensus 476 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~ 550 (611)
.. ......||+.|+|||++.+ .++.++|||||||++|||++|..||... ...... +... .+ ......
T Consensus 177 ~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~-~~~~--~~-~~~~~~ 248 (486)
T 3mwu_A 177 NT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET-GKYA--FD-LPQWRT 248 (486)
T ss_dssp C-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-TCCC--SC-SGGGGG
T ss_pred CC---ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-CCCC--CC-CcccCC
Confidence 32 2234469999999999876 5999999999999999999999887321 111110 0000 00 000012
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.++++.+++. +||+.||++|||+.|+++|
T Consensus 249 ~s~~~~~li~---~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 249 ISDDAKDLIR---KMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp SCHHHHHHHH---HHTCSSTTTSCCHHHHHHC
T ss_pred CCHHHHHHHH---HHcCCChhhCcCHHHHhcC
Confidence 3445555555 9999999999999999987
No 205
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.3e-38 Score=351.09 Aligned_cols=246 Identities=21% Similarity=0.262 Sum_probs=195.0
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc--------------hhHHHHHHHHHHHhccCCCCccceee
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK--------------LGEKKFRNEMNRLGQLRHPNLAPLLG 386 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--------------~~~~~~~~Ev~~l~~l~H~nIv~l~g 386 (611)
..+.|...+.||+|+||.||+|+.. +++.||||+++... ...+.+.+|+.++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 3567888899999999999999964 58899999986532 22467899999999999999999999
Q ss_pred EEEeCCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC---CeE
Q 035917 387 YCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF---DAR 463 (611)
Q Consensus 387 ~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~---~~k 463 (611)
++.+++..++|||||++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++ .+|
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINR-HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999988654 35999999999999999999999 78999999999999998765 699
Q ss_pred EeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCCh
Q 035917 464 IMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRS 538 (611)
Q Consensus 464 l~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~ 538 (611)
|+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|||++|..||... ..... .+..
T Consensus 190 l~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~-~~~~ 264 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY---KLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVE-KGKY 264 (504)
T ss_dssp ECCCTTCEECCTTS---CBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HCCC
T ss_pred EEECCCCEEcCCCC---ccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCC
Confidence 99999998765332 2234469999999999874 6899999999999999999999887321 11111 1000
Q ss_pred hhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 539 KEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 539 ~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
. .+. ......++++.+++. +||+.||++|||+.|+++|
T Consensus 265 ~--~~~-~~~~~~s~~~~~li~---~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 265 Y--FDF-NDWKNISDEAKELIK---LMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp C--CCH-HHHTTSCHHHHHHHH---HHTCSSTTTSCCHHHHHTS
T ss_pred C--CCc-cccCCCCHHHHHHHH---HHcCCChhHCCCHHHHhcC
Confidence 0 000 000123445555555 9999999999999999976
No 206
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=6.2e-39 Score=335.98 Aligned_cols=248 Identities=17% Similarity=0.270 Sum_probs=197.6
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchh------------------HHHHHHHHHHHhccCCCCccce
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLG------------------EKKFRNEMNRLGQLRHPNLAPL 384 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~------------------~~~~~~Ev~~l~~l~H~nIv~l 384 (611)
.++|...+.||+|+||.||+|+. +|+.||||++...... .+.+.+|+.++.+++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788889999999999999999 9999999998643211 1789999999999999999999
Q ss_pred eeEEEeCCeeEEEEeccCCCChHHh------hhcC-CCCCCHHHHHHHHHHHHHHHHHHhhcCC-CCeeecCCCCCeEEe
Q 035917 385 LGYCVVEEEKLLIYKYMSSGTLYSL------LQGN-ATELDWPTRFRIGLGAARGLAWLHHGCQ-PPFLHQNICSNVILV 456 (611)
Q Consensus 385 ~g~~~~~~~~~lv~ey~~~gsL~~~------l~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~-~~ivHrDlkp~NILl 456 (611)
++++.+.+..++||||+++|+|.++ +... ...+++..+..++.|++.||.||| + .+|+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhEEE
Confidence 9999999999999999999999998 6543 347999999999999999999999 6 899999999999999
Q ss_pred CCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCC-CCCc-ccchHHHHHHHHHHhCCCCCHH------HH
Q 035917 457 DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTM-VASL-KGDVYGIGVVLLELAGFKGNLV------DW 528 (611)
Q Consensus 457 d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~-ksDV~SfGvvl~ell~~~~~~~------~~ 528 (611)
+.++.+||+|||+++..... ......||+.|+|||.+.+. .++. ++|||||||++|||++|..||. +.
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999876432 22344699999999999876 5666 9999999999999999988873 21
Q ss_pred HHHHhhcCChhhhh------chh------hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 529 VNQLSSSGRSKEAI------DKA------LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 529 ~~~~~~~~~~~~~~------~~~------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..... ........ .+. ......+.++.+++. +||+.||++|||+.|+++|
T Consensus 262 ~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~---~~L~~dP~~Rps~~e~l~h 323 (348)
T 2pml_X 262 FNNIR-TKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLK---LFLRKNPAERITSEDALKH 323 (348)
T ss_dssp HHHHT-SCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHH---HHCCSSGGGSCCHHHHHTS
T ss_pred HHHHh-ccCcCCccchhhhhccccccccccchhhcCHHHHHHHH---HHccCChhhCCCHHHHhcC
Confidence 11111 11100000 000 000223444555554 9999999999999999985
No 207
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.4e-39 Score=341.01 Aligned_cols=251 Identities=15% Similarity=0.145 Sum_probs=196.3
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccC--------CCCccceeeEEE----
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR--------HPNLAPLLGYCV---- 389 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~--------H~nIv~l~g~~~---- 389 (611)
.++|...+.||+|+||.||+|+. .+++.||||+++......+.+.+|+.++++++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 35788889999999999999985 56899999999876666678999999999996 788999999987
Q ss_pred eCCeeEEEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeecCCCCCeEEeCCCC-------
Q 035917 390 VEEEKLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQP-PFLHQNICSNVILVDEDF------- 460 (611)
Q Consensus 390 ~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NILld~~~------- 460 (611)
.....++||||+ +|+|.+.+.... ..+++..++.++.||+.||+||| +. +|+||||||+|||++.++
T Consensus 116 ~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~~~~~ 191 (397)
T 1wak_A 116 NGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYIRRLA 191 (397)
T ss_dssp TEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred CCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhhhhhh
Confidence 455789999999 557766665443 56999999999999999999999 66 999999999999999775
Q ss_pred ------------------------------------------CeEEeecccccccCCCCCCccccCCCcccccccccccC
Q 035917 461 ------------------------------------------DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSS 498 (611)
Q Consensus 461 ------------------------------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 498 (611)
.+||+|||+++..... .....||+.|+|||++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~ 266 (397)
T 1wak_A 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLI 266 (397)
T ss_dssp HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHH
T ss_pred hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhc
Confidence 8999999999876432 22346999999999999
Q ss_pred CCCCCcccchHHHHHHHHHHhCCCCCHHH-----------HHHHHhh-cCCh-hh----------hhchh----------
Q 035917 499 TMVASLKGDVYGIGVVLLELAGFKGNLVD-----------WVNQLSS-SGRS-KE----------AIDKA---------- 545 (611)
Q Consensus 499 ~~~~t~ksDV~SfGvvl~ell~~~~~~~~-----------~~~~~~~-~~~~-~~----------~~~~~---------- 545 (611)
+..++.++|||||||++|||++|+.||.. ....... .+.. .. .+...
T Consensus 267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (397)
T 1wak_A 267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK 346 (397)
T ss_dssp TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence 88899999999999999999999887631 0000000 0000 00 00000
Q ss_pred ---------hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 546 ---------LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 546 ---------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
-......+....+.+++.+||+.||++|||+.|+++|
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 347 PWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred CcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0001234455667788889999999999999999975
No 208
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=8.4e-40 Score=337.75 Aligned_cols=251 Identities=20% Similarity=0.281 Sum_probs=192.9
Q ss_pred HhhhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc---hhHHHHHHHHHHHhccC--CCCccceeeEEEeCCeeE
Q 035917 321 AASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLR--HPNLAPLLGYCVVEEEKL 395 (611)
Q Consensus 321 ~~t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~--H~nIv~l~g~~~~~~~~~ 395 (611)
...+.|...+.||+|+||.||+|+..+++.||||++.... ...+.+.+|++++.+++ ||||+++++++..++..+
T Consensus 25 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~ 104 (313)
T 3cek_A 25 VKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104 (313)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEE
T ss_pred eccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEE
Confidence 3456788889999999999999998889999999996432 23467899999999997 599999999999999999
Q ss_pred EEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCC
Q 035917 396 LIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTS 475 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~ 475 (611)
+||| +.+++|.+++... ..+++..+..++.|+++||.||| +.+|+||||||+|||+++ +.+||+|||+++....
T Consensus 105 lv~e-~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 105 MVME-CGNIDLNSWLKKK-KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEC-CCSEEHHHHHHHC-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEEe-cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 9999 5678999999765 36899999999999999999999 789999999999999975 8999999999987644
Q ss_pred CCCCccccCCCcccccccccccCC-----------CCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhch
Q 035917 476 SDESSFVNGDLGEFGYIAPEYSST-----------MVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDK 544 (611)
Q Consensus 476 ~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (611)
...........||+.|+|||.+.+ ..++.++|||||||++|||++|+.||........ .....+++
T Consensus 179 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~---~~~~~~~~ 255 (313)
T 3cek_A 179 DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLHAIIDP 255 (313)
T ss_dssp -----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHH---HHHHHHCT
T ss_pred ccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHH---HHHHHHhc
Confidence 332222234469999999998765 4688999999999999999999988743111100 01112222
Q ss_pred hhc---CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 035917 545 ALC---GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSL 583 (611)
Q Consensus 545 ~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 583 (611)
... ....++++.+++. +||+.||++||++.|++++-
T Consensus 256 ~~~~~~~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~h~ 294 (313)
T 3cek_A 256 NHEIEFPDIPEKDLQDVLK---CCLKRDPKQRISIPELLAHP 294 (313)
T ss_dssp TSCCCCCCCSCHHHHHHHH---HHTCSSTTTSCCHHHHHTSH
T ss_pred ccccCCcccchHHHHHHHH---HHccCCcccCcCHHHHhcCc
Confidence 111 1223445555555 99999999999999999874
No 209
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=8e-39 Score=327.71 Aligned_cols=250 Identities=21% Similarity=0.292 Sum_probs=193.3
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchh---HHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLG---EKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~---~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
++|...+.||+|+||.||+|+.. +|+.||||+++..... .+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 46778899999999999999965 7999999999654322 3678899999999999999999999999999999999
Q ss_pred ccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 400 YMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 400 y~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
|+. |+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 998 59999987654 46899999999999999999999 7899999999999999999999999999998764322
Q ss_pred CccccCCCcccccccccccCCCC-CCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhh-cCChhhhh---------
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMV-ASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSS-SGRSKEAI--------- 542 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~-~~~~~~~~--------- 542 (611)
.......||+.|+|||.+.+.. ++.++|||||||++|||++|+.||.. ....... .+...+..
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 158 -RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp -BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred -cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 1122346899999999987755 79999999999999999999887632 1111110 00000000
Q ss_pred -chhhc----------CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 543 -DKALC----------GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 543 -~~~l~----------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.+... ....++++.+++. +||+.||++|||+.|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~~~l~h 284 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLS---QMLHYDPNKRISAKAALAH 284 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHH---HHTCSSTTTSCCHHHHHTS
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHH---HhcCcCcccCCCHHHHhcC
Confidence 00000 0112344455554 9999999999999999885
No 210
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=2.1e-38 Score=329.47 Aligned_cols=190 Identities=18% Similarity=0.278 Sum_probs=167.3
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccC-CCCccceeeEEEe--CCeeEEEEe
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR-HPNLAPLLGYCVV--EEEKLLIYK 399 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~-H~nIv~l~g~~~~--~~~~~lv~e 399 (611)
++|...+.||+|+||.||+|+. .+++.||||+++.. ..+.+.+|+.++++++ ||||+++++++.+ ....++|||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e 113 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFE 113 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEe
Confidence 5788889999999999999985 67999999999743 3567899999999997 9999999999987 567899999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC-CeEEeecccccccCCCCC
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF-DARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~-~~kl~DFGla~~~~~~~~ 478 (611)
|+++++|.+++. .+++..+..++.|++.||+||| +.+|+||||||+|||++.++ .+||+|||+++.......
T Consensus 114 ~~~~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~ 186 (330)
T 3nsz_A 114 HVNNTDFKQLYQ----TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE 186 (330)
T ss_dssp CCCCCCHHHHGG----GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC
T ss_pred ccCchhHHHHHH----hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc
Confidence 999999999885 3889999999999999999999 78999999999999999766 899999999987643322
Q ss_pred CccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCH
Q 035917 479 SSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNL 525 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~ 525 (611)
.....||..|+|||.+.+ ..++.++|||||||++|||++|+.||
T Consensus 187 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~ 231 (330)
T 3nsz_A 187 ---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 231 (330)
T ss_dssp ---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSS
T ss_pred ---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCc
Confidence 223468999999999876 67899999999999999999998876
No 211
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6e-40 Score=332.66 Aligned_cols=255 Identities=20% Similarity=0.301 Sum_probs=196.6
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEe--CCeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVV--EEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~--~~~~~l 396 (611)
.++|...+.||+|+||.||+|+.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.. .+..++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 457888899999999999999964 78999999996533 234678999999999999999999998865 567899
Q ss_pred EEeccCCCChHHhhhcC---CCCCCHHHHHHHHHHHHHHHHHHhhcCCCC-----eeecCCCCCeEEeCCCCCeEEeecc
Q 035917 397 IYKYMSSGTLYSLLQGN---ATELDWPTRFRIGLGAARGLAWLHHGCQPP-----FLHQNICSNVILVDEDFDARIMDFG 468 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivHrDlkp~NILld~~~~~kl~DFG 468 (611)
||||+++|+|.+++... ...+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999999998643 235999999999999999999999 555 9999999999999999999999999
Q ss_pred cccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcC
Q 035917 469 LAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCG 548 (611)
Q Consensus 469 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 548 (611)
+++...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.......... .......+. ..
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~-~i~~~~~~~-~~ 237 (279)
T 2w5a_A 162 LARILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAG-KIREGKFRR-IP 237 (279)
T ss_dssp HHHHC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH-HHHHTCCCC-CC
T ss_pred hheeecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHH-HHhhccccc-CC
Confidence 998764322 11122358999999999988889999999999999999999988763211000000 000000001 11
Q ss_pred CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHHHHch
Q 035917 549 KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIA 587 (611)
Q Consensus 549 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~ 587 (611)
...++++.+++. +||+.||++||++.||++++....
T Consensus 238 ~~~~~~l~~li~---~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 238 YRYSDELNEIIT---RMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp TTSCHHHHHHHH---HHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred cccCHHHHHHHH---HHcCCCcccCCCHHHHHhChhhhh
Confidence 234455555555 999999999999999998775443
No 212
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-40 Score=344.26 Aligned_cols=249 Identities=18% Similarity=0.207 Sum_probs=196.1
Q ss_pred hhcCCCCCeeeecCCceEEEEEe----CCCCEEEEEeccccc-----hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCC
Q 035917 323 SNSFCSENVIISTRTGTTYKAML----PDGSVLAVKRLNTCK-----LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEE 392 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~----~~g~~vAvK~~~~~~-----~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~ 392 (611)
.++|...+.||+|+||.||+|+. .+++.||||+++... ...+.+.+|++++.++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35788899999999999999996 478999999996532 2345678899999999 6999999999999999
Q ss_pred eeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
..++||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~ 208 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR-ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 208 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEE
T ss_pred eEEEEeecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCee
Confidence 999999999999999999754 35899999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCCccccCCCcccccccccccCC--CCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-----
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSST--MVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA----- 545 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~----- 545 (611)
...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... ......+.....
T Consensus 209 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~----~~~~~~~~~~~~~~~~~ 283 (355)
T 1vzo_A 209 FVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG----EKNSQAEISRRILKSEP 283 (355)
T ss_dssp CCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTT----SCCCHHHHHHHHHHCCC
T ss_pred cccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCC----ccchHHHHHHHHhccCC
Confidence 543221 12223469999999999875 347899999999999999999998873100 000111111100
Q ss_pred hcCCCCHHHHHHHHHHHhhcccCCCCCCC-----CHHHHHHHH
Q 035917 546 LCGKGYDEEILQFLKVACNCVVSRPKDRW-----SMYQVYQSL 583 (611)
Q Consensus 546 l~~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----s~~evl~~L 583 (611)
......+..+.+++. +||+.||++|| +++|+++|.
T Consensus 284 ~~~~~~~~~~~~li~---~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 284 PYPQEMSALAKDLIQ---RLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp CCCTTSCHHHHHHHH---HHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred CCCcccCHHHHHHHH---HHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 011223344555554 99999999999 999999885
No 213
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=4.4e-40 Score=348.54 Aligned_cols=248 Identities=9% Similarity=0.011 Sum_probs=176.5
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc----hhHHHHHHHHHHHhcc--CCCCcccee-------eEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK----LGEKKFRNEMNRLGQL--RHPNLAPLL-------GYC 388 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l--~H~nIv~l~-------g~~ 388 (611)
..+|...+.||+|+||.||+|+. .+|+.||||+++... ...+.+.+|+.++..+ +||||++++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 34577889999999999999996 478999999997643 2345677885444444 699988754 444
Q ss_pred EeC-----------------CeeEEEEeccCCCChHHhhhcCCCCCCHHHH------HHHHHHHHHHHHHHhhcCCCCee
Q 035917 389 VVE-----------------EEKLLIYKYMSSGTLYSLLQGNATELDWPTR------FRIGLGAARGLAWLHHGCQPPFL 445 (611)
Q Consensus 389 ~~~-----------------~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~iv 445 (611)
..+ ...++|||||+ |+|.+++......+++..+ ..++.|++.||+||| +.+|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCc
Confidence 433 23799999999 8999999754334566666 788899999999999 78999
Q ss_pred ecCCCCCeEEeCCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCC--CCCCcccchHHHHHHHHHHhCCCC
Q 035917 446 HQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSST--MVASLKGDVYGIGVVLLELAGFKG 523 (611)
Q Consensus 446 HrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~SfGvvl~ell~~~~ 523 (611)
||||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGTRG-----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTCEE-----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCCCc-----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999998763211 12247799999999987 679999999999999999999998
Q ss_pred CHHHHHHHHhhcCC---hhhhhchhhc---CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 524 NLVDWVNQLSSSGR---SKEAIDKALC---GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 524 ~~~~~~~~~~~~~~---~~~~~~~~l~---~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
||............ .......... ....++++.+++. +||+.||++|||+.|+++|
T Consensus 292 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~h 353 (371)
T 3q60_A 292 PFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIG---RFLNFDRRRRLLPLEAMET 353 (371)
T ss_dssp STTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHH---HHTCSSTTTCCCHHHHTTS
T ss_pred CCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHH---HHcCCChhhCCCHHHHhcC
Confidence 87432111000000 0000000110 0133455555555 9999999999999999875
No 214
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=4.9e-39 Score=364.39 Aligned_cols=258 Identities=20% Similarity=0.251 Sum_probs=200.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC----CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP----DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~----~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~l 396 (611)
.+.|...+.||+|+||.||+|+.. .+..||||+++... ...+.+.+|+.++++++||||+++++++. ++..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 456778899999999999999963 25679999986533 23467999999999999999999999984 566899
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~ 544 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS 544 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC-
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCC
Confidence 99999999999999866557999999999999999999999 789999999999999999999999999999876433
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCHHHH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYDEEI 555 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 555 (611)
... ......+|+.|+|||.+.+..++.++|||||||++|||++ |..||.......... ......... .....+.++
T Consensus 545 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~-~i~~~~~~~-~~~~~~~~l 621 (656)
T 2j0j_A 545 TYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-RIENGERLP-MPPNCPPTL 621 (656)
T ss_dssp ----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHH-HHHHTCCCC-CCTTCCHHH
T ss_pred cce-eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHH-HHHcCCCCC-CCccccHHH
Confidence 221 1223357889999999988899999999999999999996 777764211100000 000000001 112233444
Q ss_pred HHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhh
Q 035917 556 LQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQH 590 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~ 590 (611)
.+ ++.+||+.||++|||+.|+++.|+++.++.
T Consensus 622 ~~---li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 622 YS---LMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp HH---HHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HH---HHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 44 555999999999999999999999987653
No 215
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=5.6e-39 Score=353.08 Aligned_cols=251 Identities=20% Similarity=0.265 Sum_probs=196.1
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
.+.|...+.||+|+||.||+|+.. ++..||||+++... ...+.+.+|+.++++++|||||++++++.+.+..++||
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 456888899999999999999964 68999999996542 23467899999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC---CCCeEEeecccccccCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE---DFDARIMDFGLAKLMTS 475 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~---~~~~kl~DFGla~~~~~ 475 (611)
|||++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||+++....
T Consensus 116 e~~~~g~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 116 ECYKGGELFDEIIHR-MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp ECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred ecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 999999999988654 35899999999999999999999 789999999999999976 45599999999987653
Q ss_pred CCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCCC
Q 035917 476 SDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGKG 550 (611)
Q Consensus 476 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~ 550 (611)
.. ......||+.|+|||++. ..++.++|||||||++|||++|..||... ...... +... .+. .....
T Consensus 192 ~~---~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~-~~~~--~~~-~~~~~ 263 (494)
T 3lij_A 192 QK---KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEK-GKYT--FDS-PEWKN 263 (494)
T ss_dssp TB---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-TCCC--CCS-GGGTT
T ss_pred Cc---cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-CCCC--CCc-hhccc
Confidence 22 223456999999999886 46999999999999999999999887321 111110 0000 000 00122
Q ss_pred CHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHchh
Q 035917 551 YDEEILQFLKVACNCVVSRPKDRWSMYQVYQS--LNSIAA 588 (611)
Q Consensus 551 ~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~ 588 (611)
.++++.+++. +||+.||++|||+.|+++| +.+...
T Consensus 264 ~s~~~~~li~---~~L~~dp~~R~s~~e~l~hp~~~~~~~ 300 (494)
T 3lij_A 264 VSEGAKDLIK---QMLQFDSQRRISAQQALEHPWIKEMCS 300 (494)
T ss_dssp SCHHHHHHHH---HHTCSSTTTSCCHHHHHTCHHHHHHHH
T ss_pred CCHHHHHHHH---HHCCCChhhCccHHHHhcCcccccCcc
Confidence 3455555555 9999999999999999977 555443
No 216
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.2e-39 Score=341.78 Aligned_cols=256 Identities=18% Similarity=0.215 Sum_probs=191.4
Q ss_pred HHhhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeC-------
Q 035917 320 MAASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE------- 391 (611)
Q Consensus 320 ~~~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~------- 391 (611)
....++|...+.||+|+||.||+|+. .+|+.||||++.... +...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 34567888899999999999999995 679999999986432 2234799999999999999999998543
Q ss_pred -------------------------------CeeEEEEeccCCCChHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHh
Q 035917 392 -------------------------------EEKLLIYKYMSSGTLYSLLQG---NATELDWPTRFRIGLGAARGLAWLH 437 (611)
Q Consensus 392 -------------------------------~~~~lv~ey~~~gsL~~~l~~---~~~~l~~~~~~~i~~~ia~gL~yLH 437 (611)
...++||||+++ +|.+.+.. ....+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 337899999984 88777653 2346999999999999999999999
Q ss_pred hcCCCCeeecCCCCCeEEeC-CCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCC-CCCcccchHHHHHHH
Q 035917 438 HGCQPPFLHQNICSNVILVD-EDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVL 515 (611)
Q Consensus 438 ~~~~~~ivHrDlkp~NILld-~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl 515 (611)
+.+|+||||||+|||++ .++.+||+|||+++....... .....||+.|+|||.+.+. .++.++|||||||++
T Consensus 159 ---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 159 ---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP---SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp ---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC---CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred ---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC---CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 88999999999999997 688999999999987643322 2234689999999988764 489999999999999
Q ss_pred HHHhCCCCCHHH-----HHHHHhh---cCChhhhh--c--------hh--------hcCCCCHHHHHHHHHHHhhcccCC
Q 035917 516 LELAGFKGNLVD-----WVNQLSS---SGRSKEAI--D--------KA--------LCGKGYDEEILQFLKVACNCVVSR 569 (611)
Q Consensus 516 ~ell~~~~~~~~-----~~~~~~~---~~~~~~~~--~--------~~--------l~~~~~~~~~~~l~~l~~~Cl~~d 569 (611)
|||++|+.||.. ....... ........ + +. ......+.++.+ ++.+||+.|
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---li~~~L~~d 309 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAID---LLEQILRYE 309 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHH---HHHHHCCSS
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHH---HHHHHccCC
Confidence 999999887632 1111100 00000000 0 00 011123344444 555999999
Q ss_pred CCCCCCHHHHHHH--HHHchh
Q 035917 570 PKDRWSMYQVYQS--LNSIAA 588 (611)
Q Consensus 570 P~~RPs~~evl~~--L~~i~~ 588 (611)
|++|||+.|+++| ++++..
T Consensus 310 P~~R~t~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 310 PDLRINPYEAMAHPFFDHLRN 330 (383)
T ss_dssp GGGSCCHHHHHTSGGGHHHHH
T ss_pred hhhCCCHHHHhcCHHHHHHHh
Confidence 9999999999976 555544
No 217
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=335.58 Aligned_cols=246 Identities=21% Similarity=0.286 Sum_probs=187.3
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCC------
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE------ 392 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~------ 392 (611)
.+.|...+.||+|+||.||+|+. .+|+.||||++.... ...+++.+|++++++++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35678889999999999999996 579999999995432 23467899999999999999999999997653
Q ss_pred eeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
..++||||+ +++|.+++... .+++..+..++.|+++||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHE--KLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 459999999 78999998753 5899999999999999999999 78999999999999999999999999999987
Q ss_pred cCCCCCCccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhh-cCCh-hhh---
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSS-SGRS-KEA--- 541 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~-~~~~-~~~--- 541 (611)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.. ....... .+.. .+.
T Consensus 178 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~ 252 (367)
T 1cm8_A 178 ADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQR 252 (367)
T ss_dssp CCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred cccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 5422 233468999999998876 6799999999999999999999887631 1111110 0000 000
Q ss_pred ---------hc--hhh-------cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 542 ---------ID--KAL-------CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 542 ---------~~--~~l-------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
+. +.. .....+.++.++++ +||+.||++|||+.|+++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~---~mL~~dP~~R~t~~e~l~h 308 (367)
T 1cm8_A 253 LQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE---KMLVLDAEQRVTAGEALAH 308 (367)
T ss_dssp CSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHH---HHSCSSTTTSCCHHHHHHS
T ss_pred hhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH---HHccCChhHCCCHHHHhcC
Confidence 00 000 00122344555555 9999999999999999987
No 218
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=2.6e-38 Score=335.04 Aligned_cols=250 Identities=20% Similarity=0.194 Sum_probs=185.9
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCC------
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE------ 392 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~------ 392 (611)
.++|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 35788889999999999999995 468999999996532 23467889999999999999999999997654
Q ss_pred eeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
..++||||+++ +|.+++.. .+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred ceEEEEEcCCC-CHHHHHhh---ccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 67999999975 78888863 4899999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhhc-CC---------
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSSS-GR--------- 537 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~~-~~--------- 537 (611)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.. ........ +.
T Consensus 177 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 253 (371)
T 2xrw_A 177 AGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL 253 (371)
T ss_dssp ----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTS
T ss_pred ccccc---ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHh
Confidence 54321 12334699999999999998999999999999999999999887631 11111100 00
Q ss_pred ------------------hhhhhchhhcCCCC---HHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 538 ------------------SKEAIDKALCGKGY---DEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 538 ------------------~~~~~~~~l~~~~~---~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..........+... ......+.+++.+||+.||++|||++|+++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 254 QPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp CHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 00000000000000 1112345566669999999999999999987
No 219
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.2e-38 Score=331.59 Aligned_cols=193 Identities=17% Similarity=0.233 Sum_probs=169.9
Q ss_pred hcCCCCCeeeecCCceEEEEEe--CCCCEEEEEeccccchhHHHHHHHHHHHhccCCCC------ccceeeEEEeCCeeE
Q 035917 324 NSFCSENVIISTRTGTTYKAML--PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPN------LAPLLGYCVVEEEKL 395 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~--~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~n------Iv~l~g~~~~~~~~~ 395 (611)
++|...+.||+|+||.||+|.. .+++.||||+++......+.+.+|+++++.++|++ ++++++++...+..+
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 93 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC 93 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEE
Confidence 4677889999999999999986 36889999999776555678899999999987654 999999999999999
Q ss_pred EEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC----------------
Q 035917 396 LIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE---------------- 458 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~---------------- 458 (611)
+||||+ +++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||++.
T Consensus 94 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 94 IVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred EEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 999999 889999997654 36899999999999999999999 789999999999999987
Q ss_pred ---CCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCH
Q 035917 459 ---DFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNL 525 (611)
Q Consensus 459 ---~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~ 525 (611)
++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 234 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDEHH-----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234 (339)
T ss_dssp EESCCCEEECCCSSCEETTSCC-----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccCCCceEeeCcccccCcccc-----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCC
Confidence 6789999999998653321 2346899999999999989999999999999999999998876
No 220
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=7.8e-39 Score=327.63 Aligned_cols=246 Identities=16% Similarity=0.267 Sum_probs=195.3
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc----------hhHHHHHHHHHHHhccC-CCCccceeeEEEe
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK----------LGEKKFRNEMNRLGQLR-HPNLAPLLGYCVV 390 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~----------~~~~~~~~Ev~~l~~l~-H~nIv~l~g~~~~ 390 (611)
.++|...+.||+|+||.||+|+.. +|+.||||+++... ...+.+.+|++++++++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 457888899999999999999964 68999999986432 12356889999999996 9999999999999
Q ss_pred CCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccc
Q 035917 391 EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLA 470 (611)
Q Consensus 391 ~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla 470 (611)
++..++||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK-VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCeEEEEEeccCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccch
Confidence 99999999999999999999754 46899999999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCCccccCCCcccccccccccC------CCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChh
Q 035917 471 KLMTSSDESSFVNGDLGEFGYIAPEYSS------TMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSK 539 (611)
Q Consensus 471 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~ 539 (611)
+....... .....||+.|+|||++. ...++.++||||||+++|||++|..||... ....... ...
T Consensus 172 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~ 247 (298)
T 1phk_A 172 CQLDPGEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG-NYQ 247 (298)
T ss_dssp EECCTTCC---BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT-CCC
T ss_pred hhcCCCcc---cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcC-Ccc
Confidence 87643321 23346899999999874 456889999999999999999998876321 1111100 000
Q ss_pred hhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 540 EAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 540 ~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.. .......++++.+ ++.+||+.||++|||+.|+++|
T Consensus 248 --~~-~~~~~~~~~~l~~---li~~~l~~dp~~Rps~~~ll~h 284 (298)
T 1phk_A 248 --FG-SPEWDDYSDTVKD---LVSRFLVVQPQKRYTAEEALAH 284 (298)
T ss_dssp --CC-TTTGGGSCHHHHH---HHHHHCCSSGGGSCCHHHHTTS
T ss_pred --cC-cccccccCHHHHH---HHHHHccCCcccCCCHHHHHhC
Confidence 00 0000122344445 4459999999999999999874
No 221
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.8e-39 Score=333.03 Aligned_cols=249 Identities=19% Similarity=0.295 Sum_probs=174.2
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc--hhHHHHHHHHH-HHhccCCCCccceeeEEEeCCeeEEEEe
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK--LGEKKFRNEMN-RLGQLRHPNLAPLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~Ev~-~l~~l~H~nIv~l~g~~~~~~~~~lv~e 399 (611)
++|...+.||+|+||.||+|.. .+|+.||||+++... ....++..|+. +++.++||||+++++++..++..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 5677889999999999999997 478999999996542 23345666666 7788899999999999999999999999
Q ss_pred ccCCCChHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 400 YMSSGTLYSLLQG----NATELDWPTRFRIGLGAARGLAWLHHGCQP-PFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 400 y~~~gsL~~~l~~----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
|+++ +|.+++.. ....+++..+..++.+++.||.||| +. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9986 88877752 2346899999999999999999999 56 99999999999999999999999999998764
Q ss_pred CCCCCccccCCCccccccccccc----CCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcC--
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYS----STMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCG-- 548 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 548 (611)
.... .....||+.|+|||++ .+..++.++|||||||++|||++|+.||..+...............+.+..
T Consensus 178 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (327)
T 3aln_A 178 DSIA---KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSE 254 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCS
T ss_pred cccc---cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcc
Confidence 3221 1223589999999998 456789999999999999999999988754321111100111111111111
Q ss_pred -CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 549 -KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 549 -~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
...+.++.+++. +||+.||++||++.|++++
T Consensus 255 ~~~~~~~l~~li~---~~l~~dp~~Rps~~ell~h 286 (327)
T 3aln_A 255 EREFSPSFINFVN---LCLTKDESKRPKYKELLKH 286 (327)
T ss_dssp SCCCCHHHHHHHH---HHTCSSGGGSCCHHHHTTS
T ss_pred cccCCHHHHHHHH---HHhhCChhhCcCHHHHHhC
Confidence 123445555554 9999999999999999876
No 222
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=337.21 Aligned_cols=195 Identities=23% Similarity=0.292 Sum_probs=151.7
Q ss_pred CCC-CCeeeecCCceEEEEEeC---CCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEe--CCeeEEEEe
Q 035917 326 FCS-ENVIISTRTGTTYKAMLP---DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVV--EEEKLLIYK 399 (611)
Q Consensus 326 f~~-~~~ig~G~~g~Vy~~~~~---~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~--~~~~~lv~e 399 (611)
|.. +++||+|+||.||+|+.. +++.||||+++.... .+.+.+|+.+|++++||||+++++++.. ....++|||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e 100 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 100 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEe
Confidence 443 568999999999999965 578999999975432 3468899999999999999999999965 668899999
Q ss_pred ccCCCChHHhhhcC--------CCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe----CCCCCeEEeec
Q 035917 400 YMSSGTLYSLLQGN--------ATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV----DEDFDARIMDF 467 (611)
Q Consensus 400 y~~~gsL~~~l~~~--------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----d~~~~~kl~DF 467 (611)
|+.+ +|.+++... ...+++..++.++.||+.||+||| +.+|+||||||+|||+ +.++.+||+||
T Consensus 101 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Df 176 (405)
T 3rgf_A 101 YAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 176 (405)
T ss_dssp CCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECCT
T ss_pred CCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEEC
Confidence 9975 888877521 124899999999999999999999 7899999999999999 77889999999
Q ss_pred ccccccCCCCC-CccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCH
Q 035917 468 GLAKLMTSSDE-SSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNL 525 (611)
Q Consensus 468 Gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~ 525 (611)
|+++....... .......+||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 177 g~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 236 (405)
T 3rgf_A 177 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236 (405)
T ss_dssp TCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred CCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCC
Confidence 99987643221 122234579999999999877 45899999999999999999998887
No 223
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.3e-38 Score=333.21 Aligned_cols=251 Identities=18% Similarity=0.252 Sum_probs=193.1
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeC-----Cee
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE-----EEK 394 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~-----~~~ 394 (611)
.+.|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++.+++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 45788889999999999999995 468899999997533 2346789999999999999999999999765 367
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
++||||+.+ +|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 106 ~iv~e~~~~-~L~~~l~~~--~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 106 YIVQDLMET-DLYKLLKTQ--HLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEEEECCSE-EHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEcccCc-CHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 999999974 999998754 4899999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCC-CccccCCCcccccccccccC-CCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHh---hcCChhh----
Q 035917 475 SSDE-SSFVNGDLGEFGYIAPEYSS-TMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLS---SSGRSKE---- 540 (611)
Q Consensus 475 ~~~~-~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~---~~~~~~~---- 540 (611)
.... ........||+.|+|||++. ...++.++|||||||++|||++|+.||... ..... .......
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 259 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 259 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTC
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence 3321 11223457999999999864 455899999999999999999998876321 11100 0000000
Q ss_pred -------hhch---------hhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 541 -------AIDK---------ALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 541 -------~~~~---------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.... .......+.++ .+++.+||+.||++|||+.|+++|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 260 INLKARNYLLSLPHKNKVPWNRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCHHHHHHHHTSCCCCCCCHHHHCTTSCHHH---HHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhHHHHHHhcCCccCCCHHHhCCCCCHHH---HHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000 00001123344 445559999999999999999987
No 224
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=3.2e-38 Score=339.93 Aligned_cols=246 Identities=21% Similarity=0.236 Sum_probs=185.5
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeC----C--eeEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE----E--EKLL 396 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~----~--~~~l 396 (611)
..|...+.||+|+||.||+|+.. +|+.||||++.... +.+.+|+++|++++|||||++++++... + ..++
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 35777899999999999999974 69999999986432 2245799999999999999999998642 2 3569
Q ss_pred EEeccCCCChHHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCC-CCeEEeecccccc
Q 035917 397 IYKYMSSGTLYSLLQ---GNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED-FDARIMDFGLAKL 472 (611)
Q Consensus 397 v~ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~-~~~kl~DFGla~~ 472 (611)
||||+++ +|.+.+. .....+++..+..++.||++||+||| +.+|+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999986 6766554 23356999999999999999999999 8899999999999999955 5689999999987
Q ss_pred cCCCCCCccccCCCcccccccccccCCC-CCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhhc-C-Chhhh---
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSSS-G-RSKEA--- 541 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~~-~-~~~~~--- 541 (611)
+..... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.. ........ + ...+.
T Consensus 207 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~ 283 (420)
T 1j1b_A 207 LVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIRE 283 (420)
T ss_dssp CCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHH
T ss_pred cccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 643322 2234689999999998664 789999999999999999999988632 11111100 0 00000
Q ss_pred hch--------hh--------cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 542 IDK--------AL--------CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 542 ~~~--------~l--------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..+ .+ .....+.++.+ ++.+||+.||++|||+.|+++|
T Consensus 284 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 284 MNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIA---LCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHH---HHHHHSCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccCccCCCCHHHhcCCCCCHHHHH---HHHHhccCChhHCCCHHHHhCC
Confidence 000 00 01112344444 5559999999999999999987
No 225
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.4e-38 Score=335.39 Aligned_cols=198 Identities=18% Similarity=0.209 Sum_probs=171.0
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccC-CC-----CccceeeEEEeCCee
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR-HP-----NLAPLLGYCVVEEEK 394 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~-H~-----nIv~l~g~~~~~~~~ 394 (611)
..++|...+.||+|+||.||+|+.. +++.||||+++......+++.+|+.++..++ |+ +|+++++++...+..
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 4568888999999999999999964 6889999999866555677888999998885 55 499999999999999
Q ss_pred EEEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC--CCCCeEEeeccccc
Q 035917 395 LLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD--EDFDARIMDFGLAK 471 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld--~~~~~kl~DFGla~ 471 (611)
++||||++ |+|.+++.... ..+++..+..++.|++.||.|||.. ..+|+||||||+|||++ .++.+||+|||+++
T Consensus 132 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 132 CLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 99999996 59999997654 4699999999999999999999942 46899999999999994 57889999999998
Q ss_pred ccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHH
Q 035917 472 LMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLV 526 (611)
Q Consensus 472 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~ 526 (611)
..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 210 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~ 259 (382)
T 2vx3_A 210 QLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS 259 (382)
T ss_dssp ETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 76432 123468999999999999899999999999999999999998863
No 226
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=2.3e-38 Score=328.38 Aligned_cols=245 Identities=19% Similarity=0.272 Sum_probs=189.2
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch---------hHHHHHHHHHHHhccCCCCccceeeEEEeCC
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL---------GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE 392 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~---------~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~ 392 (611)
.++|...+.||+|+||.||+|+. .+++.||||++..... ....+.+|++++++++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 45788899999999999999996 4689999999865321 1235889999999999999999999987654
Q ss_pred eeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC---eEEeeccc
Q 035917 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD---ARIMDFGL 469 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~---~kl~DFGl 469 (611)
.++||||+++|+|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+|||++.++. +||+|||+
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGN-KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTT-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred -eEEEEecCCCCcHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 89999999999999998754 46899999999999999999999 789999999999999987654 99999999
Q ss_pred ccccCCCCCCccccCCCccccccccccc---CCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh
Q 035917 470 AKLMTSSDESSFVNGDLGEFGYIAPEYS---STMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL 546 (611)
Q Consensus 470 a~~~~~~~~~~~~~~~~gt~~y~aPE~~---~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l 546 (611)
++...... ......||+.|+|||++ ....++.++|||||||++|||++|..||.... ......+.+....
T Consensus 164 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~~~~~~~ 236 (322)
T 2ycf_A 164 SKILGETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHR----TQVSLKDQITSGK 236 (322)
T ss_dssp CEECCCCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTT----CSSCHHHHHHHTC
T ss_pred ceeccccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc----hHHHHHHHHHhCc
Confidence 98764321 11223589999999986 35678999999999999999999988873210 0001111111000
Q ss_pred c------CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 547 C------GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 547 ~------~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
. ....++++. +++.+||+.||++||++.|+++|
T Consensus 237 ~~~~~~~~~~~~~~~~---~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 237 YNFIPEVWAEVSEKAL---DLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp CCCCHHHHTTSCHHHH---HHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCchhhhhcCHHHH---HHHHHHcccCHhhCCCHHHHhhC
Confidence 0 012233444 45559999999999999999864
No 227
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.4e-38 Score=330.98 Aligned_cols=251 Identities=18% Similarity=0.220 Sum_probs=191.5
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeC-----Cee
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE-----EEK 394 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~-----~~~ 394 (611)
.++|...+.||+|+||.||+|+.. +|+.||||+++... ....++.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 457888899999999999999964 68999999996433 2346788999999999999999999988754 568
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
++||||+. |+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 90 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ--MLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEeccC-ccHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 99999997 5999998753 5899999999999999999999 7899999999999999999999999999998764
Q ss_pred CCCCC--------ccccCCCcccccccccccC-CCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHh---hcCC
Q 035917 475 SSDES--------SFVNGDLGEFGYIAPEYSS-TMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLS---SSGR 537 (611)
Q Consensus 475 ~~~~~--------~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~---~~~~ 537 (611)
..... .......||+.|+|||++. +..++.++|||||||++|||++|+.||... ..... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 243 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence 32211 1122346899999999865 467899999999999999999998876321 10000 0000
Q ss_pred ------------hhhhhchh---------hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 538 ------------SKEAIDKA---------LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 538 ------------~~~~~~~~---------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..+.+... ......+.++. +++.+||+.||++|||+.|+++|
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~li~~~L~~dP~~Rpt~~ell~h 306 (353)
T 2b9h_A 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGI---DLLQRMLVFDPAKRITAKEALEH 306 (353)
T ss_dssp STTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHH---HHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHH---HHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 00012233444 45559999999999999999986
No 228
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2e-38 Score=335.23 Aligned_cols=248 Identities=13% Similarity=0.138 Sum_probs=196.3
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccC-----------CCCccceeeEEEeC
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR-----------HPNLAPLLGYCVVE 391 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~-----------H~nIv~l~g~~~~~ 391 (611)
++|...+.||+|+||.||+|+. .+++.||||++.......+.+.+|+.++++++ ||||+++++++...
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~ 98 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK 98 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc
Confidence 4677889999999999999995 57899999999876666678899999999886 89999999999865
Q ss_pred C----eeEEEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeecCCCCCeEEeC------CC
Q 035917 392 E----EKLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQP-PFLHQNICSNVILVD------ED 459 (611)
Q Consensus 392 ~----~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NILld------~~ 459 (611)
+ ..++||||+ +++|.+++.... ..+++..+..++.||+.||+||| +. +|+||||||+|||++ ..
T Consensus 99 ~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 99 GPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp ETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEETTTTE
T ss_pred CCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccCCCcCc
Confidence 4 688999999 889999997643 36999999999999999999999 66 999999999999994 44
Q ss_pred CCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHH--------
Q 035917 460 FDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQ-------- 531 (611)
Q Consensus 460 ~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~-------- 531 (611)
+.+||+|||+++..... .....||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 175 ~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 249 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249 (373)
T ss_dssp EEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHH
T ss_pred ceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHH
Confidence 58999999999876432 12336899999999999889999999999999999999999887532100
Q ss_pred ---Hhh-cCCh--------------------------------hhhhchhhcCCCCHHHHHHHHHHHhhcccCCCCCCCC
Q 035917 532 ---LSS-SGRS--------------------------------KEAIDKALCGKGYDEEILQFLKVACNCVVSRPKDRWS 575 (611)
Q Consensus 532 ---~~~-~~~~--------------------------------~~~~~~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs 575 (611)
... .+.. .+.... ...........+.+++.+||+.||++|||
T Consensus 250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTE--KYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHH--TTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhh--cccCCcchHHHHHHHHHHHhccCccccCC
Confidence 000 0000 000000 01122344556777778999999999999
Q ss_pred HHHHHHH
Q 035917 576 MYQVYQS 582 (611)
Q Consensus 576 ~~evl~~ 582 (611)
+.|+++|
T Consensus 328 ~~ell~h 334 (373)
T 1q8y_A 328 AGGLVNH 334 (373)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999986
No 229
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=8.7e-38 Score=328.80 Aligned_cols=266 Identities=18% Similarity=0.186 Sum_probs=188.8
Q ss_pred HHHHHhhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCe--
Q 035917 317 ADLMAASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE-- 393 (611)
Q Consensus 317 ~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~-- 393 (611)
.+.....++|...+.||+|+||.||+|+. .+|+.||||++.........+.+|++.+..++||||+++++++...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 34556778999999999999999999996 468999999986654444567888999999999999999999976443
Q ss_pred -----eEEEEeccCCCChHHhhh---cCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC-CCCeEE
Q 035917 394 -----KLLIYKYMSSGTLYSLLQ---GNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE-DFDARI 464 (611)
Q Consensus 394 -----~~lv~ey~~~gsL~~~l~---~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~-~~~~kl 464 (611)
.++||||+++ +|.+.+. .....+++..+..++.|++.||.|||.. +.+|+||||||+|||++. ++.+||
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEE
Confidence 7899999986 5554443 2334689999999999999999999932 578999999999999996 899999
Q ss_pred eecccccccCCCCCCccccCCCcccccccccccCCC-CCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhh-cC-
Q 035917 465 MDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSS-SG- 536 (611)
Q Consensus 465 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~-~~- 536 (611)
+|||+++....... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.. ....... .+
T Consensus 174 ~Dfg~a~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 250 (360)
T 3e3p_A 174 CDFGSAKKLSPSEP---NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250 (360)
T ss_dssp CCCTTCBCCCTTSC---CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCC
T ss_pred eeCCCceecCCCCC---cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCC
Confidence 99999987653322 2234689999999988654 489999999999999999999887631 1111100 00
Q ss_pred Chhhh---hchh----------------hcC---CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHchhhh
Q 035917 537 RSKEA---IDKA----------------LCG---KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS--LNSIAAQH 590 (611)
Q Consensus 537 ~~~~~---~~~~----------------l~~---~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~~~ 590 (611)
...+. +++. ... ...+++ +.+++.+||+.||++|||+.|+++| ++++....
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~ 325 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKE---AYDLLSALLQYLPEERMKPYEALCHPYFDELHDPA 325 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHH---HHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGGCTT
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHH---HHHHHHHHhccCccccCCHHHHhcCccccccCCcc
Confidence 00000 0000 000 012334 4455559999999999999999987 55554443
No 230
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=3e-38 Score=329.94 Aligned_cols=247 Identities=17% Similarity=0.196 Sum_probs=169.8
Q ss_pred hhcCCC-CCeeeecCCceEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEe----CCeeEE
Q 035917 323 SNSFCS-ENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVV----EEEKLL 396 (611)
Q Consensus 323 t~~f~~-~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~----~~~~~l 396 (611)
.++|.. .++||+|+||.||+|+.. +|+.||||++.......+ +....+..++||||+++++++.. +...++
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 103 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ---EVDHHWQASGGPHIVCILDVYENMHHGKRCLLI 103 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHHHHH---HHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHHHHH---HHHHHHHhcCCCChHHHHHHHhhccCCCceEEE
Confidence 456766 457999999999999965 699999999965432222 22234566789999999999976 445789
Q ss_pred EEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC---CCCeEEeecccccc
Q 035917 397 IYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE---DFDARIMDFGLAKL 472 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~---~~~~kl~DFGla~~ 472 (611)
||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+|||++. ++.+||+|||+++.
T Consensus 104 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 104 IMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 999999999999998654 36999999999999999999999 789999999999999976 45699999999986
Q ss_pred cCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhc-----hhhc
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAID-----KALC 547 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~-----~~l~ 547 (611)
..... .....||+.|+|||++.+..++.++|||||||++|||++|..||.................. +...
T Consensus 181 ~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (336)
T 3fhr_A 181 TTQNA----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPE 256 (336)
T ss_dssp C--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTT
T ss_pred ccccc----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchh
Confidence 54322 22345899999999998888999999999999999999999988543222111100000000 0001
Q ss_pred CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 548 GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 548 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
....++++.+++. +||+.||++|||+.|+++|
T Consensus 257 ~~~~~~~~~~li~---~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 257 WSEVSEDAKQLIR---LLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp STTCCHHHHHHHH---HHSCSSGGGSCCHHHHHHS
T ss_pred hccCCHHHHHHHH---HHCCCChhHCcCHHHHhcC
Confidence 1223455555555 9999999999999999986
No 231
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2.8e-38 Score=359.22 Aligned_cols=247 Identities=17% Similarity=0.163 Sum_probs=200.2
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc----hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK----LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLL 396 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~l 396 (611)
.++|...++||+|+||.||+|+. .+++.||||+++... ...+.+..|..++..+ +||||+++++++.+.+..++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 45788889999999999999996 468899999996532 2335688999999988 79999999999999999999
Q ss_pred EEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCC
Q 035917 397 IYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSS 476 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~ 476 (611)
||||+++|+|.+++... ..+++..++.++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 420 V~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQV-GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEECCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEeCcCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 99999999999999754 35999999999999999999999 789999999999999999999999999999864322
Q ss_pred CCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchh-hcCCCCHHHH
Q 035917 477 DESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKA-LCGKGYDEEI 555 (611)
Q Consensus 477 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~~ 555 (611)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|..||........ ...++... ..+...+.++
T Consensus 496 ~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~----~~~i~~~~~~~p~~~s~~~ 569 (674)
T 3pfq_A 496 GV--TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL----FQSIMEHNVAYPKSMSKEA 569 (674)
T ss_dssp TC--CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH----HHHHHSSCCCCCTTSCHHH
T ss_pred Cc--ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHH----HHHHHhCCCCCCccCCHHH
Confidence 21 23345799999999999999999999999999999999999998742100000 01111111 1123345666
Q ss_pred HHHHHHHhhcccCCCCCCCCH-----HHHHHH
Q 035917 556 LQFLKVACNCVVSRPKDRWSM-----YQVYQS 582 (611)
Q Consensus 556 ~~l~~l~~~Cl~~dP~~RPs~-----~evl~~ 582 (611)
.++++ +||+.||++||++ +||++|
T Consensus 570 ~~li~---~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 570 VAICK---GLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHH---HHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred HHHHH---HHccCCHHHCCCCCCCcHHHHhcC
Confidence 66666 9999999999997 788765
No 232
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.2e-38 Score=337.08 Aligned_cols=253 Identities=15% Similarity=0.209 Sum_probs=188.4
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEEEeCCe------eEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE------KLLI 397 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~------~~lv 397 (611)
..|...++||+|+||.||+|+..++..||+|++.... +...+|+++++.++||||+++++++...+. .++|
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~---~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK---RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT---TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc---chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 4677889999999999999998777779999885432 123479999999999999999999976443 7899
Q ss_pred EeccCCCChHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC-CCCCeEEeecccccccC
Q 035917 398 YKYMSSGTLYSLLQ--GNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD-EDFDARIMDFGLAKLMT 474 (611)
Q Consensus 398 ~ey~~~gsL~~~l~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld-~~~~~kl~DFGla~~~~ 474 (611)
|||++++.+..... .....+++..+..++.|+++||+||| +.+|+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 99998754333221 12346999999999999999999999 78999999999999999 79999999999998764
Q ss_pred CCCCCccccCCCcccccccccccCCC-CCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhh---cCChh--hhhc
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTM-VASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSS---SGRSK--EAID 543 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~---~~~~~--~~~~ 543 (611)
.... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||.. ....... ..... ....
T Consensus 194 ~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 194 AGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp TTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHC
T ss_pred CCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhC
Confidence 3322 2234689999999988664 589999999999999999999988732 1111110 00000 0000
Q ss_pred hh----------------hcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH--HHHchh
Q 035917 544 KA----------------LCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS--LNSIAA 588 (611)
Q Consensus 544 ~~----------------l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~--L~~i~~ 588 (611)
+. ......+.++.+ ++.+||+.||++|||+.|+++| ++++..
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAID---LISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHH---HHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHH---HHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 00 001112344444 5559999999999999999987 555443
No 233
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=6.8e-38 Score=331.79 Aligned_cols=245 Identities=20% Similarity=0.251 Sum_probs=188.5
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCee----
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEK---- 394 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~---- 394 (611)
.+.|...+.||+|+||.||+|+. .+|+.||||++.... ...+++.+|+.++++++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 35677889999999999999995 468999999997532 2346789999999999999999999999876654
Q ss_pred --EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 395 --LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 395 --~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
++||||+. |+|.+++.. .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM---EFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred eEEEEEcccc-ccHHHHhhc---CCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999997 589888853 4899999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCCccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhh-cCCh-hhh---
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSS-SGRS-KEA--- 541 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~-~~~~-~~~--- 541 (611)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.. ....... .+.. .+.
T Consensus 194 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 268 (371)
T 4exu_A 194 ADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 268 (371)
T ss_dssp -----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTT
T ss_pred cccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHH
Confidence 5322 223468999999998876 6789999999999999999999887631 1111100 0000 000
Q ss_pred --------hchhh----------cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 542 --------IDKAL----------CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 542 --------~~~~l----------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
....+ .....++++.+ ++.+||+.||++|||+.|+++|
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 269 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAAD---LLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp CSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHH---HHHHHSCSCTTTSCCHHHHHTS
T ss_pred hhhhhhhhhhhccCCCcchhHHHhccccChHHHH---HHHHHCCCChhhcCCHHHHhcC
Confidence 00000 00112344444 5559999999999999999987
No 234
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.8e-38 Score=327.74 Aligned_cols=252 Identities=21% Similarity=0.266 Sum_probs=193.9
Q ss_pred HhhhcCCCCCeeeecCCceEEEEEe--CCCCEEEEEeccccch---hHHHHHHHHHHHhcc---CCCCccceeeEEE---
Q 035917 321 AASNSFCSENVIISTRTGTTYKAML--PDGSVLAVKRLNTCKL---GEKKFRNEMNRLGQL---RHPNLAPLLGYCV--- 389 (611)
Q Consensus 321 ~~t~~f~~~~~ig~G~~g~Vy~~~~--~~g~~vAvK~~~~~~~---~~~~~~~Ev~~l~~l---~H~nIv~l~g~~~--- 389 (611)
.+.++|...+.||+|+||.||+|+. .+|+.||||+++.... ....+.+|+.+++.+ +||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3456788899999999999999997 4688999999864322 123567788777766 8999999999987
Q ss_pred --eCCeeEEEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEee
Q 035917 390 --VEEEKLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMD 466 (611)
Q Consensus 390 --~~~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~D 466 (611)
.....++||||++ |+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~D 163 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLAD 163 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEec
Confidence 4567889999998 69999987654 35899999999999999999999 78999999999999999999999999
Q ss_pred cccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhh---cCCh
Q 035917 467 FGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSS---SGRS 538 (611)
Q Consensus 467 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~---~~~~ 538 (611)
||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.. ....... ....
T Consensus 164 fg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 240 (326)
T 1blx_A 164 FGLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGE 240 (326)
T ss_dssp CCSCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG
T ss_pred CcccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc
Confidence 9999865422 122345689999999999988999999999999999999999887631 1111110 0000
Q ss_pred h----------hhhch------hhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 539 K----------EAIDK------ALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 539 ~----------~~~~~------~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
. ..... .......++++.+++. +||+.||++|||+.|+++|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dP~~Rpt~~e~l~h 297 (326)
T 1blx_A 241 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL---KCLTFNPAKRISAYSALSH 297 (326)
T ss_dssp GGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHH---HHSCSSTTTSCCHHHHHTS
T ss_pred ccCccccccchhhhcccCcchhhhccccCCHHHHHHHH---HHcCCCcccCCCHHHHhcC
Confidence 0 00000 0001223445555555 9999999999999999975
No 235
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.4e-38 Score=321.59 Aligned_cols=246 Identities=19% Similarity=0.274 Sum_probs=195.6
Q ss_pred hhhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 322 ASNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
..++|...+.||+|+||.||+|+.. +++.||||++.... ...+.+.+|++++++++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467888999999999999999965 78999999986432 3457899999999999999999999999999999999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCC---CCeEEeecccccccC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDED---FDARIMDFGLAKLMT 474 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~---~~~kl~DFGla~~~~ 474 (611)
|||+++++|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.+ +.+||+|||+++...
T Consensus 100 ~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 100 GELYTGGELFDEIIKR-KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEccCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 9999999999988644 35899999999999999999999 7899999999999999754 479999999998764
Q ss_pred CCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHH-----HHHHhhcCChhhhhchhhcCC
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDW-----VNQLSSSGRSKEAIDKALCGK 549 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~ 549 (611)
..... ....||+.|+|||.+.+ .++.++||||||+++|||++|..||... ...... +... .+ .....
T Consensus 176 ~~~~~---~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~--~~-~~~~~ 247 (287)
T 2wei_A 176 QNTKM---KDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET-GKYA--FD-LPQWR 247 (287)
T ss_dssp CCSSC---SCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH-CCCC--CC-SGGGT
T ss_pred CCCcc---ccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc-CCCC--CC-chhhh
Confidence 33211 22248999999998876 4899999999999999999998886321 111111 0000 00 00012
Q ss_pred CCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 550 GYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 550 ~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..++++.+++. +||+.||++|||+.|++++
T Consensus 248 ~~~~~~~~li~---~~l~~dp~~Rps~~ell~h 277 (287)
T 2wei_A 248 TISDDAKDLIR---KMLTFHPSLRITATQCLEH 277 (287)
T ss_dssp TSCHHHHHHHH---HHTCSSGGGSCCHHHHHHS
T ss_pred hcCHHHHHHHH---HHcccChhhCcCHHHHhcC
Confidence 23445555555 9999999999999999986
No 236
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=342.87 Aligned_cols=250 Identities=20% Similarity=0.195 Sum_probs=181.5
Q ss_pred hcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEEEEeccC
Q 035917 324 NSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLLIYKYMS 402 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ey~~ 402 (611)
.+|...++||+|+||+||.....+|+.||||++..... ..+.+|+++|+++ +|||||++++++.+.+..++|||||.
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~--~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~ 101 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF--SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA 101 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE--EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH--HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC
Confidence 45777899999999997655566899999999965322 2356899999999 79999999999999999999999996
Q ss_pred CCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC-----CCCCeEEeecccccccCCCC
Q 035917 403 SGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD-----EDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 403 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld-----~~~~~kl~DFGla~~~~~~~ 477 (611)
|+|.+++........+..+..++.||+.||.||| +.+|+||||||+|||++ ....+||+|||+++......
T Consensus 102 -g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 102 -ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp -EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred -CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 5999999866545555667789999999999999 78999999999999994 33468899999998765332
Q ss_pred C-CccccCCCcccccccccccC---CCCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhcCChhhhhchhhcCCCCH
Q 035917 478 E-SSFVNGDLGEFGYIAPEYSS---TMVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSSGRSKEAIDKALCGKGYD 552 (611)
Q Consensus 478 ~-~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 552 (611)
. ........||+.|+|||++. ...++.++|||||||++|||++ |..||.......... ........... ...
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~--~~~~~~~~~~~-~~~ 254 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI--LLGACSLDCLH-PEK 254 (432)
T ss_dssp --------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHH--HTTCCCCTTSC-TTC
T ss_pred cceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHH--HhccCCccccC-ccc
Confidence 1 12233456999999999987 4567889999999999999999 777763211000000 00000000000 011
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 553 EEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 553 ~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..-..+.+++.+||+.||++|||+.||++|
T Consensus 255 ~~~~~~~~li~~~L~~dP~~Rps~~evl~h 284 (432)
T 3p23_A 255 HEDVIARELIEKMIAMDPQKRPSAKHVLKH 284 (432)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred cccHHHHHHHHHHHhCCHhhCCCHHHHHhC
Confidence 112234455559999999999999999965
No 237
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.2e-38 Score=333.81 Aligned_cols=246 Identities=20% Similarity=0.287 Sum_probs=175.7
Q ss_pred hhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeC------C
Q 035917 323 SNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVE------E 392 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~------~ 392 (611)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ...+++.+|+++++.++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 35788889999999999999995 568999999996532 2346788999999999999999999998754 5
Q ss_pred eeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 393 EKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 393 ~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
..++|+||+ +++|.+++.. ..+++..+..++.||++||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC--QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp CCEEEEECC-CEECC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred eEEEEeccc-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 579999999 6799998875 35999999999999999999999 78999999999999999999999999999986
Q ss_pred cCCCCCCccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhh-cCC-hhhhhc-
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSS-SGR-SKEAID- 543 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~-~~~-~~~~~~- 543 (611)
.... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||.. ....... .+. ..+.+.
T Consensus 182 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 256 (367)
T 2fst_X 182 TADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKK 256 (367)
T ss_dssp --------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred cccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 5322 223468999999999876 6789999999999999999999887632 1111110 000 000000
Q ss_pred ----------hhhc---C-------CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 544 ----------KALC---G-------KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 544 ----------~~l~---~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..+. . ...+.++ .+++.+||+.||++|||+.|+++|
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 257 ISSESARNYIQSLTQMPKMNFANVFIGANPLA---VDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHH---HHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhhHHHHHHHhccCCCCCCCHHHHCCCCCHHH---HHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 0 1122334 445559999999999999999987
No 238
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.3e-38 Score=324.18 Aligned_cols=250 Identities=18% Similarity=0.232 Sum_probs=183.8
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccc-hhHHHHHHHHHHHhccCCCCccceeeEEE------------
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHPNLAPLLGYCV------------ 389 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~------------ 389 (611)
+.|...+.||+|+||.||+|+.. +++.||||++.... ...+++.+|++++++++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 46777899999999999999975 48999999986543 34467899999999999999999999874
Q ss_pred --eCCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC-CCCCeEEee
Q 035917 390 --VEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD-EDFDARIMD 466 (611)
Q Consensus 390 --~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld-~~~~~kl~D 466 (611)
..+..++||||++ |+|.+++.. ..+++..+..++.|++.||+||| +.+|+||||||+||+++ +++.+||+|
T Consensus 91 ~~~~~~~~lv~e~~~-~~L~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~D 164 (320)
T 2i6l_A 91 LTELNSVYIVQEYME-TDLANVLEQ--GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGD 164 (320)
T ss_dssp CCSCSEEEEEEECCS-EEHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECC
T ss_pred ccccCceeEEeeccC-CCHHHHhhc--CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEcc
Confidence 3467899999998 599999864 35899999999999999999999 78999999999999997 567999999
Q ss_pred cccccccCCCCC-CccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhhcCC-h
Q 035917 467 FGLAKLMTSSDE-SSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSSSGR-S 538 (611)
Q Consensus 467 FGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~~~~-~ 538 (611)
||+++....... ........+|..|+|||.+.+ ..++.++|||||||++|||++|+.||.. .......... .
T Consensus 165 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 244 (320)
T 2i6l_A 165 FGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVV 244 (320)
T ss_dssp CTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCC
T ss_pred CccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 999987643211 111222357899999998754 6789999999999999999999887631 1111110000 0
Q ss_pred -----hh-------hhchhh---------cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 539 -----KE-------AIDKAL---------CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 539 -----~~-------~~~~~l---------~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
.+ .+.... .....+.++.+++ .+||+.||++|||+.|+++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li---~~~L~~dP~~Rpt~~ell~h 306 (320)
T 2i6l_A 245 HEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFL---EQILTFSPMDRLTAEEALSH 306 (320)
T ss_dssp CHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHH---HTTSCSSGGGSCCHHHHHTS
T ss_pred chhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHH---HHHcCCCccccCCHHHHhCC
Confidence 00 000000 0112334445544 49999999999999999986
No 239
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.2e-37 Score=326.25 Aligned_cols=193 Identities=17% Similarity=0.223 Sum_probs=168.1
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CC-CEEEEEeccccchhHHHHHHHHHHHhccCCCC------ccceeeEEEeCCeeE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DG-SVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPN------LAPLLGYCVVEEEKL 395 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g-~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~n------Iv~l~g~~~~~~~~~ 395 (611)
++|...+.||+|+||.||+|+.. ++ +.||||+++......+.+.+|+.++++++|++ ++.+.+++...+..+
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMC 98 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEE
Confidence 56788899999999999999964 34 68999999876556678899999999997766 899999999999999
Q ss_pred EEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEe------------------
Q 035917 396 LIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILV------------------ 456 (611)
Q Consensus 396 lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl------------------ 456 (611)
+||||+ +++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+|||+
T Consensus 99 lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 99 IAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccccc
Confidence 999999 567777776543 46999999999999999999999 8899999999999999
Q ss_pred -CCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCH
Q 035917 457 -DEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNL 525 (611)
Q Consensus 457 -d~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~ 525 (611)
+.++.+||+|||+++...... ....||+.|+|||++.+..++.++|||||||++|||++|..||
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 239 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEHH-----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 239 (355)
T ss_dssp EESCCCEEECCCTTCEETTSCC-----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ccCCCcEEEeecCccccccccc-----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCC
Confidence 567899999999998653321 2346999999999999989999999999999999999998886
No 240
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.6e-38 Score=329.67 Aligned_cols=241 Identities=16% Similarity=0.236 Sum_probs=195.7
Q ss_pred hhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch-------hHHHHHHHHHHHhccC--CCCccceeeEEEeC
Q 035917 322 ASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL-------GEKKFRNEMNRLGQLR--HPNLAPLLGYCVVE 391 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~Ev~~l~~l~--H~nIv~l~g~~~~~ 391 (611)
..++|...+.||+|+||.||+|+. .+++.||||+++.... ..+.+.+|+.++++++ ||||+++++++..+
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 345688889999999999999985 5789999999965432 2245778999999996 59999999999999
Q ss_pred CeeEEEEeccCC-CChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC-CCCCeEEeeccc
Q 035917 392 EEKLLIYKYMSS-GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD-EDFDARIMDFGL 469 (611)
Q Consensus 392 ~~~~lv~ey~~~-gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld-~~~~~kl~DFGl 469 (611)
+..++||||+.+ ++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+|||++ +++.+||+|||+
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER-GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred CcEEEEEEcCCCCccHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 999999999976 8999998754 45899999999999999999999 78999999999999999 788999999999
Q ss_pred ccccCCCCCCccccCCCcccccccccccCCCCC-CcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcC
Q 035917 470 AKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVA-SLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCG 548 (611)
Q Consensus 470 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 548 (611)
++...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||......... .....
T Consensus 197 ~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~---------~~~~~ 263 (320)
T 3a99_A 197 GALLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG---------QVFFR 263 (320)
T ss_dssp CEECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHC---------CCCCS
T ss_pred cccccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcc---------ccccc
Confidence 98764322 223469999999999877665 68899999999999999999887432111110 01112
Q ss_pred CCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 549 KGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 549 ~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
...++++.+++. +||+.||++|||+.|++++
T Consensus 264 ~~~~~~~~~li~---~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 264 QRVSSECQHLIR---WCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp SCCCHHHHHHHH---HHTCSSGGGSCCHHHHHTS
T ss_pred ccCCHHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 234455555555 9999999999999999875
No 241
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=324.62 Aligned_cols=244 Identities=20% Similarity=0.261 Sum_probs=188.1
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccc---hhHHHHHHHHHHHhccCCCCccceeeEEEeCCe------
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCK---LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE------ 393 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~---~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~------ 393 (611)
++|...+.||+|+||.||+|+. .+|+.||||++.... ...+++.+|+.++++++||||+++++++...+.
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 4677789999999999999996 468999999996532 224678999999999999999999999987654
Q ss_pred eEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeeccccccc
Q 035917 394 KLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 394 ~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~ 473 (611)
.++||||+. |+|.+++.. .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 104 ~~lv~e~~~-~~l~~~~~~---~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL---KFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS---CCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred EEEEecccc-CCHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 499999997 599888753 4899999999999999999999 789999999999999999999999999999865
Q ss_pred CCCCCCccccCCCcccccccccccCC-CCCCcccchHHHHHHHHHHhCCCCCHHH-----HHHHHhhc-CCh-h------
Q 035917 474 TSSDESSFVNGDLGEFGYIAPEYSST-MVASLKGDVYGIGVVLLELAGFKGNLVD-----WVNQLSSS-GRS-K------ 539 (611)
Q Consensus 474 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~SfGvvl~ell~~~~~~~~-----~~~~~~~~-~~~-~------ 539 (611)
... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||.. ........ +.. .
T Consensus 177 ~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~ 251 (353)
T 3coi_A 177 DAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKL 251 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTC
T ss_pred CCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHH
Confidence 322 223468999999998876 6789999999999999999999887631 11111000 000 0
Q ss_pred ------hhhc-------hhh--cCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 540 ------EAID-------KAL--CGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 540 ------~~~~-------~~l--~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
..+. +.. .....+.++.+++. +||+.||++|||+.|+++|
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~---~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 252 NDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLE---KMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp SCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHH---HHSCSCTTTSCCHHHHHTS
T ss_pred hhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHH---HHcCCCcccCCCHHHHhcC
Confidence 0000 000 00123445555555 9999999999999999987
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=324.37 Aligned_cols=243 Identities=17% Similarity=0.224 Sum_probs=188.4
Q ss_pred HHhhhcCCCCCeeeecCCceEEEEEe-CCCCEEEEEeccccch-------hHHHHHHHHHHHhcc----CCCCccceeeE
Q 035917 320 MAASNSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTCKL-------GEKKFRNEMNRLGQL----RHPNLAPLLGY 387 (611)
Q Consensus 320 ~~~t~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~-------~~~~~~~Ev~~l~~l----~H~nIv~l~g~ 387 (611)
....++|...+.||+|+||.||+|+. .+++.||||+++.... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34456799999999999999999985 5789999999965432 123467899999998 89999999999
Q ss_pred EEeCCeeEEEEec-cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC-CCCCeEEe
Q 035917 388 CVVEEEKLLIYKY-MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD-EDFDARIM 465 (611)
Q Consensus 388 ~~~~~~~~lv~ey-~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld-~~~~~kl~ 465 (611)
+...+..++|||| +.+++|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++ .++.+||+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEK-GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHH-CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEEC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEE
Confidence 9999999999999 7899999999754 35899999999999999999999 78999999999999999 88999999
Q ss_pred ecccccccCCCCCCccccCCCcccccccccccCCCCCC-cccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhch
Q 035917 466 DFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVAS-LKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDK 544 (611)
Q Consensus 466 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t-~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (611)
|||+++...... .....||..|+|||++.+..+. .++|||||||++|||++|+.||.......... .
T Consensus 183 dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--------~ 250 (312)
T 2iwi_A 183 DFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAE--------L 250 (312)
T ss_dssp CCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTC--------C
T ss_pred EcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhc--------c
Confidence 999998765432 2234589999999988766664 58999999999999999998874321111100 0
Q ss_pred hhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 545 ALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 545 ~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
......+.++.+++. +||+.||++|||+.|++++
T Consensus 251 -~~~~~~~~~~~~li~---~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 251 -HFPAHVSPDCCALIR---RCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp -CCCTTSCHHHHHHHH---HHTCSSTTTSCCHHHHHHS
T ss_pred -CCcccCCHHHHHHHH---HHccCChhhCcCHHHHhcC
Confidence 011233445555555 9999999999999999986
No 243
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=7.2e-38 Score=323.32 Aligned_cols=244 Identities=17% Similarity=0.273 Sum_probs=175.0
Q ss_pred hhcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccchh--H-HHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKLG--E-KKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~~--~-~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
.++|...+.||+|+||.||+|+.. +|+.||||++...... . +.+.++..+++.++||||+++++++..++..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356777889999999999999974 7999999999654322 2 33445556788889999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCC-CeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQP-PFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~-~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
||+ ++.+..+.......+++..+..++.+++.||.||| +. +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp CCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 999 44566555443456899999999999999999999 54 89999999999999999999999999997664322
Q ss_pred CCccccCCCcccccccccccC-----CCCCCcccchHHHHHHHHHHhCCCCCHHHH------HHHHhhcCChhhhhchhh
Q 035917 478 ESSFVNGDLGEFGYIAPEYSS-----TMVASLKGDVYGIGVVLLELAGFKGNLVDW------VNQLSSSGRSKEAIDKAL 546 (611)
Q Consensus 478 ~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~SfGvvl~ell~~~~~~~~~------~~~~~~~~~~~~~~~~~l 546 (611)
. .....||+.|+|||.+. ...++.++|||||||++|||++|+.||... ........ .+..
T Consensus 180 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~------~~~~ 250 (318)
T 2dyl_A 180 A---KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE------PPLL 250 (318)
T ss_dssp ----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSC------CCCC
T ss_pred c---ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccC------CCCC
Confidence 1 12335899999999984 456889999999999999999998887421 11111000 0011
Q ss_pred c-CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 547 C-GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 547 ~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
. ....+.++.+++. +||+.||.+||++.|+++|
T Consensus 251 ~~~~~~~~~l~~li~---~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 251 PGHMGFSGDFQSFVK---DCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp CSSSCCCHHHHHHHH---HHTCSCTTTSCCHHHHTTS
T ss_pred CccCCCCHHHHHHHH---HHccCChhHCcCHHHHhhC
Confidence 0 1123455555555 9999999999999999986
No 244
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.1e-37 Score=337.16 Aligned_cols=249 Identities=20% Similarity=0.184 Sum_probs=180.3
Q ss_pred CCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEEEEeccCCC
Q 035917 326 FCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLLIYKYMSSG 404 (611)
Q Consensus 326 f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ey~~~g 404 (611)
|...++||+|+||+||.+...+|+.||||++... ..+.+.+|++++.++ +|||||++++++.+++..++|||||. |
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-g 93 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID--FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-L 93 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-E
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH--HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-C
Confidence 3345789999999998777778999999998653 235678999999986 89999999999999999999999996 6
Q ss_pred ChHHhhhcCCC---C---CCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC-------------CCCeEEe
Q 035917 405 TLYSLLQGNAT---E---LDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE-------------DFDARIM 465 (611)
Q Consensus 405 sL~~~l~~~~~---~---l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~-------------~~~~kl~ 465 (611)
+|.+++..... . .++..++.++.||+.||+||| +.+|+||||||+|||++. ++.+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 99999976532 1 133346789999999999999 789999999999999965 3589999
Q ss_pred ecccccccCCCCCC--ccccCCCcccccccccccCC-------CCCCcccchHHHHHHHHHHhC-CCCCHHHHHHHHhhc
Q 035917 466 DFGLAKLMTSSDES--SFVNGDLGEFGYIAPEYSST-------MVASLKGDVYGIGVVLLELAG-FKGNLVDWVNQLSSS 535 (611)
Q Consensus 466 DFGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~t~ksDV~SfGvvl~ell~-~~~~~~~~~~~~~~~ 535 (611)
|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||++ |+.||.+.......
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~- 249 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESN- 249 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHHH-
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHHH-
Confidence 99999977543211 11234469999999998865 568999999999999999998 78776321100000
Q ss_pred CChhhhhc-hhhcCCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 536 GRSKEAID-KALCGKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 536 ~~~~~~~~-~~l~~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
....... +.............+.+++.+||+.||++|||+.||++|
T Consensus 250 -i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h 296 (434)
T 2rio_A 250 -IIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296 (434)
T ss_dssp -HHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred -HhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhC
Confidence 0000000 000111122233455566669999999999999999874
No 245
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-36 Score=346.05 Aligned_cols=237 Identities=16% Similarity=0.228 Sum_probs=187.1
Q ss_pred hcCCCCCeeeecCCceEEEEEeC--CCCEEEEEeccccc--hhHHHHHHHHHHHhccCCCCccceeeEEEeCCe-----e
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP--DGSVLAVKRLNTCK--LGEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEE-----K 394 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~--~g~~vAvK~~~~~~--~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~-----~ 394 (611)
++|...+.||+|+||.||+|+.. +|+.||||++.... ...+.+.+|++++.+++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57888899999999999999975 68999999986432 334678999999999999999999999987665 6
Q ss_pred EEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccC
Q 035917 395 LLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMT 474 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~ 474 (611)
++||||+++++|.+++.. .++|..++.++.||+.||.||| +.+|+||||||+|||++.+ .+||+|||+++...
T Consensus 160 ~lv~E~~~g~~L~~~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~ 232 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRIN 232 (681)
T ss_dssp EEEEECCCCEECC----C---CCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTTCEETT
T ss_pred EEEEEeCCCCcHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEecccchhcc
Confidence 999999999999988764 5999999999999999999999 7899999999999999986 89999999998764
Q ss_pred CCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhcCCCC-HH
Q 035917 475 SSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALCGKGY-DE 553 (611)
Q Consensus 475 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~ 553 (611)
.. ....||+.|+|||++.+. ++.++|||||||++|||++|..++... .... +..... ..
T Consensus 233 ~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~---------~~~~----~~~~~~~~~ 292 (681)
T 2pzi_A 233 SF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGR---------YVDG----LPEDDPVLK 292 (681)
T ss_dssp CC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTE---------ECSS----CCTTCHHHH
T ss_pred cC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccc---------cccc----ccccccccc
Confidence 32 234699999999998765 489999999999999999987765320 0000 000000 11
Q ss_pred HHHHHHHHHhhcccCCCCCCCC-HHHHHHHHHHch
Q 035917 554 EILQFLKVACNCVVSRPKDRWS-MYQVYQSLNSIA 587 (611)
Q Consensus 554 ~~~~l~~l~~~Cl~~dP~~RPs-~~evl~~L~~i~ 587 (611)
....+.+++.+||+.||++||+ ++++...|..+.
T Consensus 293 ~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 293 TYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp HCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred cCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 1234555666999999999995 566666666654
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=4.3e-36 Score=306.53 Aligned_cols=229 Identities=14% Similarity=0.056 Sum_probs=178.0
Q ss_pred hcCCCCCeeeecCCceEEEEEeC-CCCEEEEEeccccch----hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEEE
Q 035917 324 NSFCSENVIISTRTGTTYKAMLP-DGSVLAVKRLNTCKL----GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~~----~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
+.|...+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|+.++.+++||||+++++++..++..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 46778899999999999999975 489999999975432 2367999999999999999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||+++++|.+++... .....+.+++.|++.||+||| +.+|+||||||+|||++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~---~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~---------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS---PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA---------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC----------
T ss_pred EecCCCCHHHHHhcC---CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc----------
Confidence 999999999999643 355578899999999999999 7899999999999999999999997443
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHH-h-h--cCChhhhhchhhcCCCCHHH
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQL-S-S--SGRSKEAIDKALCGKGYDEE 554 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~-~-~--~~~~~~~~~~~l~~~~~~~~ 554 (611)
|++| ++.++|||||||++|||++|+.||....... . . .........+.......+++
T Consensus 175 ------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (286)
T 3uqc_A 175 ------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQ 235 (286)
T ss_dssp ------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHH
T ss_pred ------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHH
Confidence 3333 6889999999999999999998874310000 0 0 00000000011111233455
Q ss_pred HHHHHHHHhhcccCCCCCCCCHHHHHHHHHHchhhhC
Q 035917 555 ILQFLKVACNCVVSRPKDRWSMYQVYQSLNSIAAQHG 591 (611)
Q Consensus 555 ~~~l~~l~~~Cl~~dP~~RPs~~evl~~L~~i~~~~~ 591 (611)
+.+++. +||+.||++| |+.|+++.|+++.....
T Consensus 236 l~~li~---~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 236 ISAVAA---RSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp HHHHHH---HHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred HHHHHH---HHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 555555 9999999999 99999999999876643
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.4e-36 Score=337.93 Aligned_cols=260 Identities=16% Similarity=0.200 Sum_probs=193.1
Q ss_pred hcCCCCCeeeecCCceEEEEEe-CCCCEEEEEecccc--chhHHHHHHHHHHHhccCCCCccceeeEEEe------CCee
Q 035917 324 NSFCSENVIISTRTGTTYKAML-PDGSVLAVKRLNTC--KLGEKKFRNEMNRLGQLRHPNLAPLLGYCVV------EEEK 394 (611)
Q Consensus 324 ~~f~~~~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~--~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~------~~~~ 394 (611)
++|...+.||+|+||.||+|.. .+|+.||||+++.. ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 6799999999999999999996 56899999998653 2334679999999999999999999998765 5677
Q ss_pred EEEEeccCCCChHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCC---eEEeeccc
Q 035917 395 LLIYKYMSSGTLYSLLQGNA--TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFD---ARIMDFGL 469 (611)
Q Consensus 395 ~lv~ey~~~gsL~~~l~~~~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~---~kl~DFGl 469 (611)
++||||+++|+|.+++.... ..+++..+..++.+++.||+||| +.+|+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 99999999999999997643 26889999999999999999999 789999999999999987664 99999999
Q ss_pred ccccCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHH------HHHHHhhcCChhhhhc
Q 035917 470 AKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD------WVNQLSSSGRSKEAID 543 (611)
Q Consensus 470 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~------~~~~~~~~~~~~~~~~ 543 (611)
++....... .....||+.|+|||.+.+..++.++|||||||++|||++|..||.. |...............
T Consensus 171 a~~~~~~~~---~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~ 247 (676)
T 3qa8_A 171 AKELDQGEL---CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVY 247 (676)
T ss_dssp CCBTTSCCC---CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSC
T ss_pred ccccccccc---cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhh
Confidence 987654322 2334699999999999999999999999999999999999988732 1100000000000000
Q ss_pred ----------hhhc--CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHH-----HHHHHHchhh
Q 035917 544 ----------KALC--GKGYDEEILQFLKVACNCVVSRPKDRWSMYQV-----YQSLNSIAAQ 589 (611)
Q Consensus 544 ----------~~l~--~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~ev-----l~~L~~i~~~ 589 (611)
..+. ..........+.+++.+||+.||++|||+.|+ .+.++.+...
T Consensus 248 ~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~ 310 (676)
T 3qa8_A 248 DDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSL 310 (676)
T ss_dssp CCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCC
T ss_pred hhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhc
Confidence 0000 00111122344455559999999999999884 4455555443
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.6e-36 Score=324.21 Aligned_cols=240 Identities=16% Similarity=0.149 Sum_probs=178.2
Q ss_pred hhhcCCCCCeeeecCCceEEEEE-eCCCCEEEEEeccccc----hhHHHHHHHHHHHhccCC-CCccceeeE--------
Q 035917 322 ASNSFCSENVIISTRTGTTYKAM-LPDGSVLAVKRLNTCK----LGEKKFRNEMNRLGQLRH-PNLAPLLGY-------- 387 (611)
Q Consensus 322 ~t~~f~~~~~ig~G~~g~Vy~~~-~~~g~~vAvK~~~~~~----~~~~~~~~Ev~~l~~l~H-~nIv~l~g~-------- 387 (611)
.+.+|...++||+|+||.||+|+ ..+|+.||||+++... ...+.+.+|+.+++.++| +|...+..+
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 34557777899999999999999 4579999999987332 123679999999999987 322211111
Q ss_pred -------------EEe-----CCeeEEEEeccCCCChHHhhh------cCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCC
Q 035917 388 -------------CVV-----EEEKLLIYKYMSSGTLYSLLQ------GNATELDWPTRFRIGLGAARGLAWLHHGCQPP 443 (611)
Q Consensus 388 -------------~~~-----~~~~~lv~ey~~~gsL~~~l~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 443 (611)
+.. ....+++|+++ +++|.+++. .....+++..++.++.|+++||+||| +.+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYG 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTT
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCC
Confidence 111 12346777766 579999884 22235888999999999999999999 789
Q ss_pred eeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCccccCCCccccccccccc----------CCCCCCcccchHHHHH
Q 035917 444 FLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYS----------STMVASLKGDVYGIGV 513 (611)
Q Consensus 444 ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~t~ksDV~SfGv 513 (611)
|+||||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ ....++.++|||||||
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGv 305 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGL 305 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHH
Confidence 999999999999999999999999999865322 334468 999999998 6667899999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHhhcCChhhhhchhhc-CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHH
Q 035917 514 VLLELAGFKGNLVDWVNQLSSSGRSKEAIDKALC-GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQS 582 (611)
Q Consensus 514 vl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~ 582 (611)
++|||++|+.||.... ..+..+..+. ....++++.+++. +||+.||++||++.|++++
T Consensus 306 il~elltg~~Pf~~~~--------~~~~~~~~~~~~~~~~~~~~~li~---~~l~~dP~~Rpt~~~~l~~ 364 (413)
T 3dzo_A 306 AIYWIWCADLPNTDDA--------ALGGSEWIFRSCKNIPQPVRALLE---GFLRYPKEDRLLPLQAMET 364 (413)
T ss_dssp HHHHHHHSSCCCCTTG--------GGSCSGGGGSSCCCCCHHHHHHHH---HHTCSSGGGSCCHHHHTTS
T ss_pred HHHHHHHCCCCCCCcc--------hhhhHHHHHhhcccCCHHHHHHHH---HHccCChhhCcCHHHHHhC
Confidence 9999999999874311 1111111111 1234455555555 9999999999998887654
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.6e-35 Score=302.23 Aligned_cols=226 Identities=16% Similarity=0.215 Sum_probs=174.3
Q ss_pred hcCCCC-CeeeecCCceEEEEEe-CCCCEEEEEeccccchhHHHHHHHHHHH-hccCCCCccceeeEEEe----CCeeEE
Q 035917 324 NSFCSE-NVIISTRTGTTYKAML-PDGSVLAVKRLNTCKLGEKKFRNEMNRL-GQLRHPNLAPLLGYCVV----EEEKLL 396 (611)
Q Consensus 324 ~~f~~~-~~ig~G~~g~Vy~~~~-~~g~~vAvK~~~~~~~~~~~~~~Ev~~l-~~l~H~nIv~l~g~~~~----~~~~~l 396 (611)
++|... ++||+|+||.||+|.. .+++.||||+++.. ..+.+|+.++ +..+||||+++++++.. ....++
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 92 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLI 92 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEE
Confidence 345554 7899999999999996 57899999999643 4577889888 55689999999999987 667899
Q ss_pred EEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCC---CCCeEEeecccccc
Q 035917 397 IYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDE---DFDARIMDFGLAKL 472 (611)
Q Consensus 397 v~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~---~~~~kl~DFGla~~ 472 (611)
||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++. ++.+||+|||+++.
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 169 (299)
T 3m2w_A 93 VMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE 169 (299)
T ss_dssp EECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence 999999999999997654 36999999999999999999999 789999999999999998 78999999999875
Q ss_pred cCCCCCCccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCCCCHHHHHHHHhhcCChhhhhchhh-----c
Q 035917 473 MTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVDWVNQLSSSGRSKEAIDKAL-----C 547 (611)
Q Consensus 473 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~ 547 (611)
.. +..++.++|||||||++|||++|+.||..................... .
T Consensus 170 ~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (299)
T 3m2w_A 170 TT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPE 225 (299)
T ss_dssp CT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHH
T ss_pred cc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchh
Confidence 42 134678999999999999999999887432211111100000000000 0
Q ss_pred CCCCHHHHHHHHHHHhhcccCCCCCCCCHHHHHHHH
Q 035917 548 GKGYDEEILQFLKVACNCVVSRPKDRWSMYQVYQSL 583 (611)
Q Consensus 548 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPs~~evl~~L 583 (611)
....++++.+++. +||+.||++|||+.|+++|-
T Consensus 226 ~~~~~~~~~~li~---~~l~~dP~~Rps~~e~l~hp 258 (299)
T 3m2w_A 226 WSEVSEEVKMLIR---NLLKTEPTQRMTITEFMNHP 258 (299)
T ss_dssp HTTSCHHHHHHHH---HHTCSSTTTSCCHHHHHTSH
T ss_pred cccCCHHHHHHHH---HHcccChhhCCCHHHHhcCh
Confidence 0123444555554 99999999999999999873
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.7e-36 Score=314.83 Aligned_cols=240 Identities=11% Similarity=0.030 Sum_probs=178.4
Q ss_pred hhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc---------hhHHHHHHHHHHHhccC---------CCCccce
Q 035917 323 SNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK---------LGEKKFRNEMNRLGQLR---------HPNLAPL 384 (611)
Q Consensus 323 t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~---------~~~~~~~~Ev~~l~~l~---------H~nIv~l 384 (611)
.++|...+.||+|+||.||+|+. +|+.||||+++... ...+.+.+|+.++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35677889999999999999998 78999999996532 12367899999998886 6666666
Q ss_pred eeEEE-----------------e-------------CCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 035917 385 LGYCV-----------------V-------------EEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLA 434 (611)
Q Consensus 385 ~g~~~-----------------~-------------~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~ 434 (611)
.+.+. . .+..++|||||++|++.+.+.+ ..+++..++.++.||+.||+
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~--~~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT--KLSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT--TCCCHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh--cCCCHHHHHHHHHHHHHHHH
Confidence 66543 2 6789999999999987776653 35899999999999999999
Q ss_pred HHhhcCCCCeeecCCCCCeEEeCCCC--------------------CeEEeecccccccCCCCCCccccCCCcccccccc
Q 035917 435 WLHHGCQPPFLHQNICSNVILVDEDF--------------------DARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAP 494 (611)
Q Consensus 435 yLH~~~~~~ivHrDlkp~NILld~~~--------------------~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aP 494 (611)
|||+ +.+|+||||||+|||++.++ .+||+|||+|+..... ..+||+.|+||
T Consensus 176 ~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------~~~gt~~y~aP 246 (336)
T 2vuw_A 176 VAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------IVVFCDVSMDE 246 (336)
T ss_dssp HHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT-------EEECCCCTTCS
T ss_pred HHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC-------cEEEeecccCh
Confidence 9993 36899999999999999887 8999999999876432 12599999999
Q ss_pred cccCCCCCCcccchHHHHHH-HHHHhCCCCCHHHHHH--HHhhcCChhhh--hchhhcCCCCHHHHHHHHHHHhhcccCC
Q 035917 495 EYSSTMVASLKGDVYGIGVV-LLELAGFKGNLVDWVN--QLSSSGRSKEA--IDKALCGKGYDEEILQFLKVACNCVVSR 569 (611)
Q Consensus 495 E~~~~~~~t~ksDV~SfGvv-l~ell~~~~~~~~~~~--~~~~~~~~~~~--~~~~l~~~~~~~~~~~l~~l~~~Cl~~d 569 (611)
|++.+.. +.++||||++++ .+++..|..||..... ..... .... ................+.+++.+||+.|
T Consensus 247 E~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d 323 (336)
T 2vuw_A 247 DLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDK--MLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS 323 (336)
T ss_dssp GGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHH--HHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS
T ss_pred hhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHh--hhhhhccCcccchhhhhhcCHHHHHHHHHHhccC
Confidence 9998766 899999998777 6778889889865321 11100 0000 0000000001122334555555999976
Q ss_pred CCCCCCHHHHH-HH
Q 035917 570 PKDRWSMYQVY-QS 582 (611)
Q Consensus 570 P~~RPs~~evl-~~ 582 (611)
|+.|++ +|
T Consensus 324 -----sa~e~l~~H 332 (336)
T 2vuw_A 324 -----SATDLLCQH 332 (336)
T ss_dssp -----SHHHHHHHC
T ss_pred -----CHHHHHhcC
Confidence 999998 64
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=4.5e-30 Score=285.87 Aligned_cols=181 Identities=18% Similarity=0.118 Sum_probs=128.2
Q ss_pred eeecCCceEEEEE-eCCCCEEEEEeccccc-----------hhHHHHHHHHHHHhcc-CCCCccceeeEEEeCCeeEEEE
Q 035917 332 IISTRTGTTYKAM-LPDGSVLAVKRLNTCK-----------LGEKKFRNEMNRLGQL-RHPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 332 ig~G~~g~Vy~~~-~~~g~~vAvK~~~~~~-----------~~~~~~~~Ev~~l~~l-~H~nIv~l~g~~~~~~~~~lv~ 398 (611)
.+.|+.|.++.++ .-.|+.||||.+.... ...++|.+|+++|+++ .|+||+++++++.+++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666666554 3458899999995431 2235799999999999 6999999999999999999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCC
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDE 478 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~ 478 (611)
||++||+|.+++... ++++.. +|+.||+.||+|+| +.+||||||||+|||+++++.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~-~~l~~~---~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~- 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG-EEIDRE---KILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC- 393 (569)
T ss_dssp ECCCSEEHHHHHHTT-CCCCHH---HHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred ecCCCCcHHHHHHhC-CCCCHH---HHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC-
Confidence 999999999999865 356654 58899999999999 8999999999999999999999999999998764332
Q ss_pred CccccCCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCC
Q 035917 479 SSFVNGDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522 (611)
Q Consensus 479 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~ 522 (611)
....+.+||++|||||++.+ .+..++|+||+|++++++.++.
T Consensus 394 -~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 394 -SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp -CCSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred -ccccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 12233469999999999876 4677899999999998886554
No 252
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=2.2e-26 Score=237.70 Aligned_cols=166 Identities=33% Similarity=0.520 Sum_probs=152.1
Q ss_pred CCChhHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCc--ccceecCCCC-CCcEEEEEecCCcccc--cCCccCcCCC
Q 035917 46 TVAEDDVKCLEGVKSSLNDPQRKLSSWSFGNSTIGFICQ--FVGVSCWNDK-ENRILNLELREMKLSG--KIPEPLKFCK 120 (611)
Q Consensus 46 ~~~~~d~~aL~~~k~~l~~~~~~l~~W~~~~~~~~~~c~--w~Gv~C~~~~-~~~v~~l~l~~~~l~g--~~p~~l~~l~ 120 (611)
.|.++|.+||++||+++.||. .+++|+.+ .+||. |.||+|+... .++|+.|+|++++++| .+|+.++.++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~----~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~ 76 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPT----TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLP 76 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTT----SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCT
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCC----CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCC
Confidence 367889999999999998886 78999642 35788 9999996421 2689999999999999 9999999999
Q ss_pred CCCEEEccC-CCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCccccc
Q 035917 121 SMQRLDLSA-NDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFS 199 (611)
Q Consensus 121 ~L~~L~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 199 (611)
+|++|+|++ |++.|.+|..+.. +++|++|+|++|+++|.+|..++++++|++|+|++|.++|.+|..+..+++|++|+
T Consensus 77 ~L~~L~L~~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 77 YLNFLYIGGINNLVGPIPPAIAK-LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGG-CTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCeeeCCCCCcccccCChhHhc-CCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 999999995 9999999999998 99999999999999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCccCCCCC
Q 035917 200 VANNDLTGTIPSSFKGFD 217 (611)
Q Consensus 200 l~~N~l~g~ip~~~~~~~ 217 (611)
+++|+++|.+|..+..+.
T Consensus 156 L~~N~l~~~~p~~l~~l~ 173 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFS 173 (313)
T ss_dssp CCSSCCEEECCGGGGCCC
T ss_pred CcCCcccCcCCHHHhhhh
Confidence 999999999999887654
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.93 E-value=2.5e-27 Score=262.34 Aligned_cols=182 Identities=14% Similarity=0.156 Sum_probs=141.4
Q ss_pred CCCCeeeecCCceEEEEEeCCCCEEEEEeccccch---------hHHHHHHHHHHHhccCCCCccceeeEEEeCCeeEEE
Q 035917 327 CSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKL---------GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEEEKLLI 397 (611)
Q Consensus 327 ~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~---------~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~~~~lv 397 (611)
...++||+|+||.||+|.. .++.+|+|+...... ..+++.+|++++++++||||+++..++...+..++|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467999999999999954 578889998643211 124589999999999999999877777788889999
Q ss_pred EeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCC
Q 035917 398 YKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSD 477 (611)
Q Consensus 398 ~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~ 477 (611)
|||+++|+|.+++.. +..++.|+++||+||| +.+|+||||||+|||++. .+||+|||+++......
T Consensus 418 mE~~~ggsL~~~l~~---------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 418 MSYINGKLAKDVIED---------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp EECCCSEEHHHHSTT---------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred EECCCCCCHHHHHHH---------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 999999999999974 5689999999999999 789999999999999998 99999999999874322
Q ss_pred CCc-----cccCCCcccccccccccCC--CCCCcccchHHHHHHHHHHhCCCC
Q 035917 478 ESS-----FVNGDLGEFGYIAPEYSST--MVASLKGDVYGIGVVLLELAGFKG 523 (611)
Q Consensus 478 ~~~-----~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~SfGvvl~ell~~~~ 523 (611)
... ......||+.|||||++.. ..|+..+|+||..+-.++-+..++
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~ 536 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRA 536 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCS
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcc
Confidence 111 1123469999999999876 567888999998887777664443
No 254
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.90 E-value=6.3e-25 Score=254.35 Aligned_cols=161 Identities=19% Similarity=0.302 Sum_probs=142.7
Q ss_pred CChhHHHHHHHHHHhCCCCCCCCCCCCCCCC-CCCCC--Ccc------------cceecCCCCCCcEEEEEecCCccccc
Q 035917 47 VAEDDVKCLEGVKSSLNDPQRKLSSWSFGNS-TIGFI--CQF------------VGVSCWNDKENRILNLELREMKLSGK 111 (611)
Q Consensus 47 ~~~~d~~aL~~~k~~l~~~~~~l~~W~~~~~-~~~~~--c~w------------~Gv~C~~~~~~~v~~l~l~~~~l~g~ 111 (611)
...+|+.||++||+++.+| +|+.++. ...+| |.| .||+|+. .+||+.|+|++++|+|.
T Consensus 266 ~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~--~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 266 EYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN--NGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp HHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT--TSCEEEEECTTTCCEEE
T ss_pred cchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC--CCCEEEEECccCCCCCc
Confidence 3458999999999999877 7975430 01234 999 9999964 57999999999999999
Q ss_pred CCccCcCCCCCCEEEc-cCCCCCcc-------------------------------------------------------
Q 035917 112 IPEPLKFCKSMQRLDL-SANDLSGN------------------------------------------------------- 135 (611)
Q Consensus 112 ~p~~l~~l~~L~~L~L-s~N~l~g~------------------------------------------------------- 135 (611)
+|+++++|++|+.|+| ++|.|+|.
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 88866665
Q ss_pred ---------------------CchhHHhcCCCCCEEECcCCcCcc-----------------cCccCcc--CCcCccccc
Q 035917 136 ---------------------IPAQICNWLPYLVLLDLSNNDLSG-----------------PIPADLG--NCTYLNTLI 175 (611)
Q Consensus 136 ---------------------ip~~~~~~l~~L~~L~Ls~N~l~G-----------------~iP~~~~--~l~~L~~L~ 175 (611)
||..+++ +++|+.|+|++|+|+| .||..++ ++++|++|+
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~IP~~l~~-L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~ 497 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITFISKAIQR-LTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVE 497 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEEECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEE
T ss_pred cccccchhhceeccccCcccchhHHHhc-CCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEE
Confidence 8889988 9999999999999999 4999988 999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccc-cCC-CCCccCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANND-LTG-TIPSSFKG 215 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~-l~g-~ip~~~~~ 215 (611)
|++|++.|.+|..|+++++|+.|+|++|+ |+| .+|..+++
T Consensus 498 Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~ 539 (876)
T 4ecn_A 498 LYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTR 539 (876)
T ss_dssp EESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHH
T ss_pred CcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHh
Confidence 99999999999999999999999999998 999 89986653
No 255
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.89 E-value=2.7e-24 Score=243.27 Aligned_cols=169 Identities=20% Similarity=0.290 Sum_probs=146.9
Q ss_pred hhHHHHHHHHHHhCCCCCC--------CCCCCCCCCCCCCCCCcc---cceecCCCCCCcEEEEEecCCcccccCCccCc
Q 035917 49 EDDVKCLEGVKSSLNDPQR--------KLSSWSFGNSTIGFICQF---VGVSCWNDKENRILNLELREMKLSGKIPEPLK 117 (611)
Q Consensus 49 ~~d~~aL~~~k~~l~~~~~--------~l~~W~~~~~~~~~~c~w---~Gv~C~~~~~~~v~~l~l~~~~l~g~~p~~l~ 117 (611)
..|+.||.+|+.++.++.- ...+|+.+ .++|.| .||+|+. .++|+.|+|++++++|.+|++++
T Consensus 29 ~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~----~~~c~w~~~~GV~C~~--~~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 29 IKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN----KELDMWGAQPGVSLNS--NGRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp HHHHHHHHHHHHHTTGGGCCCCC------CCCCCS----SCGGGTTCCTTEEECT--TCCEEEEECTTSCCEEEECGGGG
T ss_pred HHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC----CCcccccCCCCeEEcC--CCCEEEEEecCcccCCcCChHHh
Confidence 4799999999999975531 23479743 358999 9999965 37999999999999999999999
Q ss_pred CCCCCCEEEccCC-------------------------------------------------------------------
Q 035917 118 FCKSMQRLDLSAN------------------------------------------------------------------- 130 (611)
Q Consensus 118 ~l~~L~~L~Ls~N------------------------------------------------------------------- 130 (611)
+|++|+.|+|++|
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~ 182 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRIT 182 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCC
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccc
Confidence 9999999999988
Q ss_pred -----------CCCccCchhHHhcCCCCCEEECcCCcCccc-----------------CccCcc--CCcCcccccccccc
Q 035917 131 -----------DLSGNIPAQICNWLPYLVLLDLSNNDLSGP-----------------IPADLG--NCTYLNTLILSNNK 180 (611)
Q Consensus 131 -----------~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~-----------------iP~~~~--~l~~L~~L~L~~N~ 180 (611)
+|+| ||..+++ +++|++|+|++|.|+|. +|..++ ++++|++|+|++|.
T Consensus 183 l~~l~l~~~~n~l~~-ip~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~ 260 (636)
T 4eco_A 183 LKDTQIGQLSNNITF-VSKAVMR-LTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCP 260 (636)
T ss_dssp CCTTTTTCCSCEEEE-ECGGGGG-CTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCT
T ss_pred hhhhhhccccCCCcc-CCHHHhc-ccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCc
Confidence 4456 8999998 99999999999999997 999999 99999999999999
Q ss_pred cCCCCChhhhcCCCcccccccccc-cCC-CCCccCC---------CCCcccCCCCC
Q 035917 181 LSGPIPYQLSNLGRLKKFSVANND-LTG-TIPSSFK---------GFDKADFDGNS 225 (611)
Q Consensus 181 l~g~iP~~l~~l~~L~~L~l~~N~-l~g-~ip~~~~---------~~~~~~~~~n~ 225 (611)
++|.+|..|+++++|++|++++|+ ++| .+|..++ ++..+.+.+|.
T Consensus 261 l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~ 316 (636)
T 4eco_A 261 NLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316 (636)
T ss_dssp TCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred CCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc
Confidence 999999999999999999999998 999 9998764 44455566654
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=8.3e-24 Score=244.52 Aligned_cols=171 Identities=26% Similarity=0.378 Sum_probs=138.5
Q ss_pred cCCChhHHHHHHHHHHhCCCCCCCCCCCCCCCCCCCCCCcccceecCCCCCCcEEEEEecCCccccc---CC--------
Q 035917 45 ETVAEDDVKCLEGVKSSLNDPQRKLSSWSFGNSTIGFICQFVGVSCWNDKENRILNLELREMKLSGK---IP-------- 113 (611)
Q Consensus 45 ~~~~~~d~~aL~~~k~~l~~~~~~l~~W~~~~~~~~~~c~w~Gv~C~~~~~~~v~~l~l~~~~l~g~---~p-------- 113 (611)
+++.++|++||++||+++.||. .+++|+.+ .+||+|.||+|+ .++|+.|+|+++++.|. +|
T Consensus 7 ~~~~~~~~~all~~k~~~~~~~-~l~~W~~~----~~~C~w~gv~C~---~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~ 78 (768)
T 3rgz_A 7 SQSLYREIHQLISFKDVLPDKN-LLPDWSSN----KNPCTFDGVTCR---DDKVTSIDLSSKPLNVGFSAVSSSLLSLTG 78 (768)
T ss_dssp -CCHHHHHHHHHHHHTTCSCTT-SSTTCCTT----SCGGGSTTEEEE---TTEEEEEECTTSCCCEEHHHHHHHTTTCTT
T ss_pred ccCCHHHHHHHHHHHhhCCCcc-cccCCCCC----CCCcCCcceEEC---CCcEEEEECCCCCcCCccCccChhHhccCc
Confidence 3345689999999999999998 89999732 358999999996 47999999999999987 44
Q ss_pred ---------------ccCcCCCCCCEEEccCCCCCccCch--hHHhcCCCCCEEECcCCcCcccCccCc-cCCcCccccc
Q 035917 114 ---------------EPLKFCKSMQRLDLSANDLSGNIPA--QICNWLPYLVLLDLSNNDLSGPIPADL-GNCTYLNTLI 175 (611)
Q Consensus 114 ---------------~~l~~l~~L~~L~Ls~N~l~g~ip~--~~~~~l~~L~~L~Ls~N~l~G~iP~~~-~~l~~L~~L~ 175 (611)
+.++.+++|++|||++|.++|.+|. .++. +++|++|||++|.++|.+|..+ +++++|++||
T Consensus 79 L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 157 (768)
T 3rgz_A 79 LESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGS-CSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLD 157 (768)
T ss_dssp CCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGG-CTTCCEEECCSSEEECCSSCCSCCCCTTCSEEE
T ss_pred ccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhC-CCCCCEEECcCCccCCcCCHHHhccCCCCCEEE
Confidence 5678889999999999999999998 8888 9999999999999999999876 7888999999
Q ss_pred ccccccCCCCChh---hhcCCCcccccccccccCCCCCc-cCCCCCcccCCCC
Q 035917 176 LSNNKLSGPIPYQ---LSNLGRLKKFSVANNDLTGTIPS-SFKGFDKADFDGN 224 (611)
Q Consensus 176 L~~N~l~g~iP~~---l~~l~~L~~L~l~~N~l~g~ip~-~~~~~~~~~~~~n 224 (611)
|++|.++|.+|.. +.++++|++|++++|.++|.+|. .+.++..+.+.+|
T Consensus 158 Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n 210 (768)
T 3rgz_A 158 LSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSN 210 (768)
T ss_dssp CCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSS
T ss_pred CCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCC
Confidence 9999988888876 66777777777777777766653 2334444444444
No 257
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.6e-23 Score=212.79 Aligned_cols=151 Identities=13% Similarity=0.065 Sum_probs=121.5
Q ss_pred HHHHHhhhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccch-------------------hHHHHHHHHHHHhccC
Q 035917 317 ADLMAASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKL-------------------GEKKFRNEMNRLGQLR 377 (611)
Q Consensus 317 ~~l~~~t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~-------------------~~~~~~~Ev~~l~~l~ 377 (611)
..+.....-|...+.||+|+||.||+|...+|+.||||.++.... ....+.+|++++++++
T Consensus 83 ~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 83 HRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 334444455666799999999999999997899999999964221 2456899999999999
Q ss_pred CCCccceeeEEEeCCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeC
Q 035917 378 HPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVD 457 (611)
Q Consensus 378 H~nIv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld 457 (611)
| +++.+++.. +..++||||+++|+|.+ +.. .....++.|++.||.||| +.+|+||||||+|||++
T Consensus 163 --~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~ 227 (282)
T 1zar_A 163 --G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVS 227 (282)
T ss_dssp --T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEE
T ss_pred --C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEE
Confidence 5 777776543 56799999999999998 432 124479999999999999 78999999999999999
Q ss_pred CCCCeEEeecccccccCCCCCCccccCCCcccccccccccC
Q 035917 458 EDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSS 498 (611)
Q Consensus 458 ~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 498 (611)
++.+||+|||+++. +..|+|||++.
T Consensus 228 -~~~vkl~DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 228 -EEGIWIIDFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp -TTEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred -CCcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence 99999999999873 33468898764
No 258
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.84 E-value=3.6e-22 Score=207.38 Aligned_cols=167 Identities=20% Similarity=0.278 Sum_probs=139.9
Q ss_pred CChhHHHHHHHHHHhC-CCCCCCCCCCCCCCCCCCCCCcccceecCC-------CCCCcEEEEEecCCcccccCCccCcC
Q 035917 47 VAEDDVKCLEGVKSSL-NDPQRKLSSWSFGNSTIGFICQFVGVSCWN-------DKENRILNLELREMKLSGKIPEPLKF 118 (611)
Q Consensus 47 ~~~~d~~aL~~~k~~l-~~~~~~l~~W~~~~~~~~~~c~w~Gv~C~~-------~~~~~v~~l~l~~~~l~g~~p~~l~~ 118 (611)
+..+|..||++||+++ .||.+.+++|.........+|.|.|++|+. ....+|+.|+|++|++. .+|+.++.
T Consensus 24 ~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~ 102 (328)
T 4fcg_A 24 ALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFR 102 (328)
T ss_dssp CCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGG
T ss_pred cCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhh
Confidence 4458999999999998 477666788942222335689999999941 12358999999999998 88888999
Q ss_pred CCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccccccCCCCChhhhc-------
Q 035917 119 CKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSN------- 191 (611)
Q Consensus 119 l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~------- 191 (611)
+++|++|+|++|.++ .+|..++. +++|++|+|++|.++ .+|..++++++|++|+|++|++.|.+|..++.
T Consensus 103 l~~L~~L~L~~n~l~-~lp~~~~~-l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 103 LSHLQHMTIDAAGLM-ELPDTMQQ-FAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GTTCSEEEEESSCCC-CCCSCGGG-GTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred CCCCCEEECCCCCcc-chhHHHhc-cCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 999999999999999 89998888 899999999999998 88999999999999999999999999987765
Q ss_pred --CCCcccccccccccCCCCCccCCCCCc
Q 035917 192 --LGRLKKFSVANNDLTGTIPSSFKGFDK 218 (611)
Q Consensus 192 --l~~L~~L~l~~N~l~g~ip~~~~~~~~ 218 (611)
+++|++|++++|.++ .+|..+++++.
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~ 207 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQN 207 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTT
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCC
Confidence 889999999999998 88877765544
No 259
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.82 E-value=8e-21 Score=219.55 Aligned_cols=137 Identities=41% Similarity=0.662 Sum_probs=128.8
Q ss_pred EEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccccc
Q 035917 101 LELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNNK 180 (611)
Q Consensus 101 l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~ 180 (611)
++++.+.++|.+|+.++.++.|+.||||+|+|+|.||.+++. +++|+.|||++|+|+|.||..++++++|++|||++|+
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~-l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~ 691 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS-MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNK 691 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGG-CTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhc-cccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCc
Confidence 355668899999999999999999999999999999999998 9999999999999999999999999999999999999
Q ss_pred cCCCCChhhhcCCCcccccccccccCCCCCcc--CCCCCcccCCCCCCCCCCCCCCCcCCC
Q 035917 181 LSGPIPYQLSNLGRLKKFSVANNDLTGTIPSS--FKGFDKADFDGNSDLCGGPLGSKCGGL 239 (611)
Q Consensus 181 l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~--~~~~~~~~~~~n~~lc~~~~~~~c~~~ 239 (611)
|+|.+|..++++++|++|++++|+|+|.||.. +..++...|.||+++||.|+. .|...
T Consensus 692 l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 692 LDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp CEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred ccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 99999999999999999999999999999974 677888899999999999986 89754
No 260
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.77 E-value=2.3e-19 Score=179.72 Aligned_cols=136 Identities=17% Similarity=0.171 Sum_probs=105.9
Q ss_pred CCCCCeeeecCCceEEEEEe-CCCCE--EEEEeccccchh-------------------------HHHHHHHHHHHhccC
Q 035917 326 FCSENVIISTRTGTTYKAML-PDGSV--LAVKRLNTCKLG-------------------------EKKFRNEMNRLGQLR 377 (611)
Q Consensus 326 f~~~~~ig~G~~g~Vy~~~~-~~g~~--vAvK~~~~~~~~-------------------------~~~~~~Ev~~l~~l~ 377 (611)
|...+.||+|+||.||+|.. .+|+. ||||+++..... ...+.+|+.+|.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 45668999999999999997 78999 999987542111 136889999999999
Q ss_pred CCCc--cceeeEEEeCCeeEEEEeccCC-C----ChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 035917 378 HPNL--APLLGYCVVEEEKLLIYKYMSS-G----TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNIC 450 (611)
Q Consensus 378 H~nI--v~l~g~~~~~~~~~lv~ey~~~-g----sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk 450 (611)
|+++ ..++++ +..+|||||+.+ | +|.++... .++..+..++.|++.||.|||. ..+|+|||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~----~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlk 198 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE----LKELDVEGIFNDVVENVKRLYQ--EAELVHADLS 198 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG----GGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc----cChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCC
Confidence 8865 333332 356899999942 4 67666432 2244567899999999999994 4689999999
Q ss_pred CCeEEeCCCCCeEEeeccccccc
Q 035917 451 SNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 451 p~NILld~~~~~kl~DFGla~~~ 473 (611)
|+|||++. .++|+|||+|...
T Consensus 199 p~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 199 EYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp TTSEEESS--SEEECCCTTCEET
T ss_pred HHHEEEcC--cEEEEECcccccC
Confidence 99999998 9999999999754
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=5.1e-18 Score=166.76 Aligned_cols=146 Identities=23% Similarity=0.337 Sum_probs=124.5
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchh-HHhcCCCCCEEE
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQ-ICNWLPYLVLLD 151 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~-~~~~l~~L~~L~ 151 (611)
..|+|.+|.|.+.. ...++.|+|++|++++..|..+..+++|+.|+|++|.|+ .+|.. +.. +++|+.|+
T Consensus 17 ~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~-l~~L~~L~ 94 (229)
T 3e6j_A 17 CSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLG-ALPVGVFDS-LTQLTVLD 94 (229)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTT-CTTCCEEE
T ss_pred CEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCC-CcChhhccc-CCCcCEEE
Confidence 47999999997532 235789999999999999999999999999999999997 56654 455 99999999
Q ss_pred CcCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC---CcccCCCCCCCC
Q 035917 152 LSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF---DKADFDGNSDLC 228 (611)
Q Consensus 152 Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~---~~~~~~~n~~lc 228 (611)
|++|+|++..|..+..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+ ..+.+.+|+..|
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 9999999777777899999999999999999 899999999999999999999997766666554 445677777555
Q ss_pred C
Q 035917 229 G 229 (611)
Q Consensus 229 ~ 229 (611)
.
T Consensus 174 ~ 174 (229)
T 3e6j_A 174 E 174 (229)
T ss_dssp T
T ss_pred C
Confidence 3
No 262
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.72 E-value=1.4e-17 Score=162.65 Aligned_cols=148 Identities=22% Similarity=0.276 Sum_probs=128.1
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEEC
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDL 152 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L 152 (611)
+.|.|..|.|.+.. ...++.|+|++|++++..+..+..+++|+.|+|++|.+++..|..+.. +++|++|+|
T Consensus 9 C~C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L~L 87 (220)
T 2v9t_B 9 CTCSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQG-LRSLNSLVL 87 (220)
T ss_dssp SEEETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTT-CSSCCEEEC
T ss_pred CEECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhC-CcCCCEEEC
Confidence 35789999996432 136889999999999988889999999999999999999888888888 999999999
Q ss_pred cCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC---CcccCCCCCCCCC
Q 035917 153 SNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF---DKADFDGNSDLCG 229 (611)
Q Consensus 153 s~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~---~~~~~~~n~~lc~ 229 (611)
++|+|++..+..+..+++|++|+|++|++++..|..|..+++|+.|+|++|++++..|..+..+ ..+.+.+|+..|.
T Consensus 88 s~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 88 YGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 9999995544557899999999999999999999999999999999999999999888766654 4556778876663
No 263
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.72 E-value=2.8e-17 Score=158.70 Aligned_cols=148 Identities=22% Similarity=0.234 Sum_probs=122.8
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEEC
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDL 152 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L 152 (611)
..|.|.+|.|.+.. ...++.|+|++|++++..+..+..+++|+.|+|++|++++..+..+.. +++|++|+|
T Consensus 5 C~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L 83 (208)
T 2o6s_A 5 CSCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNK-LTSLTYLNL 83 (208)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT-CTTCCEEEC
T ss_pred CEECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCC-CCCcCEEEC
Confidence 35899999996432 225889999999999877777899999999999999999544444556 999999999
Q ss_pred cCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCC---CCcccCCCCCCCCC
Q 035917 153 SNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG---FDKADFDGNSDLCG 229 (611)
Q Consensus 153 s~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~n~~lc~ 229 (611)
++|++++..|..++++++|++|+|++|++++..|..+..+++|+.|++++|++++..+..+.. +..+.+.+|+..|.
T Consensus 84 s~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC
Confidence 999999776667899999999999999999888878999999999999999999877665554 45556778865543
No 264
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1.8e-17 Score=158.28 Aligned_cols=150 Identities=21% Similarity=0.296 Sum_probs=124.3
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCc-cCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEE
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPE-PLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLD 151 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 151 (611)
..|.|..+.|.+.. ...++.|+|++|++++..+. .++.+++|+.|+|++|.|++.+|..+.. +++|+.|+
T Consensus 6 C~C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~ 84 (192)
T 1w8a_A 6 CHCEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEG-ASHIQELQ 84 (192)
T ss_dssp SEEETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTT-CTTCCEEE
T ss_pred CEECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCC-cccCCEEE
Confidence 35889999997532 12688999999999987775 4899999999999999999988988888 99999999
Q ss_pred CcCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCcc-CC-CCCcccCCCCCCCCC
Q 035917 152 LSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSS-FK-GFDKADFDGNSDLCG 229 (611)
Q Consensus 152 Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~-~~-~~~~~~~~~n~~lc~ 229 (611)
|++|++++..|..++++++|++|+|++|+|++.+|..+..+++|++|+|++|.|++..+-. +. .+....+.++...|+
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCG 164 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBC
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCC
Confidence 9999999999988999999999999999999999999999999999999999999987732 11 122223344444565
Q ss_pred CC
Q 035917 230 GP 231 (611)
Q Consensus 230 ~~ 231 (611)
.|
T Consensus 165 ~P 166 (192)
T 1w8a_A 165 AP 166 (192)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 265
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.72 E-value=1.3e-17 Score=162.75 Aligned_cols=148 Identities=18% Similarity=0.227 Sum_probs=127.9
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCc-cCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEE
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPE-PLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLD 151 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 151 (611)
+.|.|..+.|.+.. ...++.|+|++|++++..|. .+..+++|+.|+|++|.+++..|..+.. +++|+.|+
T Consensus 9 C~C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~-l~~L~~L~ 87 (220)
T 2v70_A 9 CRCEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEG-ASGVNEIL 87 (220)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEE
T ss_pred CEECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCC-CCCCCEEE
Confidence 34789999996532 12467899999999998765 4899999999999999999766667877 99999999
Q ss_pred CcCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCC---cccCCCCCCCC
Q 035917 152 LSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFD---KADFDGNSDLC 228 (611)
Q Consensus 152 Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~---~~~~~~n~~lc 228 (611)
|++|.+++..|..+.++++|++|+|++|+|++..|..|.++++|+.|+|++|++++..|..|..+. .+.+.+|+..|
T Consensus 88 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 88 LTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp CCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 999999988888899999999999999999999999999999999999999999999998877654 45577777665
Q ss_pred C
Q 035917 229 G 229 (611)
Q Consensus 229 ~ 229 (611)
.
T Consensus 168 ~ 168 (220)
T 2v70_A 168 N 168 (220)
T ss_dssp S
T ss_pred C
Confidence 4
No 266
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.69 E-value=6.6e-18 Score=173.97 Aligned_cols=136 Identities=30% Similarity=0.494 Sum_probs=106.5
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|.++|.+|..++.++ |+.|+|++|.+++.+|..+.. +++|+.|+|++|.++|.+|. +..+++|++|+|
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~L 251 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGS-DKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDL 251 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCT-TSCCSEEECCSSEECCBGGG-CCCCTTCCEEEC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhc-CCCCCEEECCCCceeeecCc-ccccCCCCEEEC
Confidence 455666666666666666666665 666666666666666666666 77788888888888777665 677888999999
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCcc--CCCCCcccCCCCCCCCCCCCCCCc
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSS--FKGFDKADFDGNSDLCGGPLGSKC 236 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~--~~~~~~~~~~~n~~lc~~~~~~~c 236 (611)
++|+++|.+|..+..+++|+.|+|++|+++|.+|.. +.++..+.+.+|+.+||.|.+ .|
T Consensus 252 s~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 252 RNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp CSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred cCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 999999999999999999999999999999999975 445667788999999998875 46
No 267
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=1.2e-16 Score=150.10 Aligned_cols=129 Identities=22% Similarity=0.225 Sum_probs=93.2
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEEC
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDL 152 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L 152 (611)
..|+|.+|.|.+.. ...++.|+|++|++.+..+..++.+++|++|+|++|.+++..|..+.. +++|+.|+|
T Consensus 5 C~C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l 83 (177)
T 2o6r_A 5 CSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDK-LTKLTILYL 83 (177)
T ss_dssp CEEETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT-CTTCCEEEC
T ss_pred CEeCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccC-CCccCEEEC
Confidence 35889999996432 125677788888877666566777788888888888887433344455 778888888
Q ss_pred cCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 153 SNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 153 s~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
++|.+++..|..++++++|++|+|++|.|++..+..+..+++|+.|++++|.+++..|
T Consensus 84 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 84 HENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8888876666667777888888888888876555556777788888888888777665
No 268
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.66 E-value=1.2e-16 Score=159.13 Aligned_cols=128 Identities=21% Similarity=0.239 Sum_probs=104.3
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|++++..+..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|++++..|..+.++++|++|+|
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 114 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDD-LTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhcc-CCcCCEEECCCCcccccChhHhcccCCCCEEEc
Confidence 5778999999999888888999999999999999999766666776 889999999999998777777888899999999
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC---CcccCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF---DKADFDGNS 225 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~---~~~~~~~n~ 225 (611)
++|+|++..|..|..+++|+.|+|++|++++..|..++.+ ..+.+.+|.
T Consensus 115 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 115 GGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 9999987777777888889999999998887766566544 344455553
No 269
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.62 E-value=4.8e-16 Score=161.16 Aligned_cols=120 Identities=21% Similarity=0.293 Sum_probs=82.7
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+|++|+++ .+|..++.+++|+.|+|++|.+++ +|+.+.. +++|+.|+|++|++.|.+|..++++++|+.|+|
T Consensus 184 ~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~-l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L 260 (328)
T 4fcg_A 184 NLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHH-LPKLEELDLRGCTALRNYPPIFGGRAPLKRLIL 260 (328)
T ss_dssp TCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGG-CTTCCEEECTTCTTCCBCCCCTTCCCCCCEEEC
T ss_pred CCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhcc-CCCCCEEECcCCcchhhhHHHhcCCCCCCEEEC
Confidence 4566666666666 666666777777777777777763 5556665 677777777777777777777777777777777
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCCcc
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDKA 219 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~ 219 (611)
++|++.+.+|..+.++++|+.|+|++|++.|.+|.++++++.+
T Consensus 261 ~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L 303 (328)
T 4fcg_A 261 KDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN 303 (328)
T ss_dssp TTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTT
T ss_pred CCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCc
Confidence 7777777777767777777777777777777777766665544
No 270
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=1.4e-16 Score=166.64 Aligned_cols=135 Identities=10% Similarity=0.046 Sum_probs=99.0
Q ss_pred CCCCCeeeecCCceEEEEEeCCCCEEEEEeccccch---------------hHH--------HHHHHHHHHhccCCCCcc
Q 035917 326 FCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKL---------------GEK--------KFRNEMNRLGQLRHPNLA 382 (611)
Q Consensus 326 f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~---------------~~~--------~~~~Ev~~l~~l~H~nIv 382 (611)
|.....||+|++|.||+|..++|+.||||+++.... ... ...+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 778899999999999999999999999998753210 011 124566677777554432
Q ss_pred ceeeEEEeCCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCC--
Q 035917 383 PLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDF-- 460 (611)
Q Consensus 383 ~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~-- 460 (611)
-..-+.. ...+|||||+++++|.++... .....++.|++.+|.||| ..+||||||||.|||+++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~-------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl~~dgd~ 244 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV-------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILIREEKDA 244 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC-------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEEEEECS
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc-------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeCCCCc
Confidence 2221222 224799999999888765431 123567899999999999 78999999999999998776
Q ss_pred --------CeEEeecccccc
Q 035917 461 --------DARIMDFGLAKL 472 (611)
Q Consensus 461 --------~~kl~DFGla~~ 472 (611)
.+.|+||+-+..
T Consensus 245 ~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 245 EDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp SCTTSEEEEEEECCCTTCEE
T ss_pred ccccccccceEEEEeCCccc
Confidence 389999986653
No 271
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.61 E-value=9.5e-16 Score=172.17 Aligned_cols=161 Identities=20% Similarity=0.205 Sum_probs=118.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCccc----ceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCC
Q 035917 64 DPQRKLSSWSFGNSTIGFICQFV----GVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSAND 131 (611)
Q Consensus 64 ~~~~~l~~W~~~~~~~~~~c~w~----Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~ 131 (611)
|+...+++|+..-+....+|.+. .|.|.+.+ +..++.|+|++|+|++..|.+|.+|++|++|||++|+
T Consensus 8 ~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 8 DDDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp -----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CCcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCc
Confidence 34445667764433333456543 46786421 2368899999999999888899999999999999999
Q ss_pred CCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCC-CCC
Q 035917 132 LSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTG-TIP 210 (611)
Q Consensus 132 l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g-~ip 210 (611)
+++-.|..|.. +++|++|+|++|+|++..|..+.+|++|++|+|++|+|++..|..|+++++|++|+|++|.+++ .+|
T Consensus 88 i~~i~~~~f~~-L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 166 (635)
T 4g8a_A 88 IQTIEDGAYQS-LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLP 166 (635)
T ss_dssp CCEECTTTTTT-CTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred CCCcChhHhcC-CCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCc
Confidence 99655556776 9999999999999997777789999999999999999998777789999999999999999976 567
Q ss_pred ccCCCCC---cccCCCCC
Q 035917 211 SSFKGFD---KADFDGNS 225 (611)
Q Consensus 211 ~~~~~~~---~~~~~~n~ 225 (611)
..++.++ .+.+.+|.
T Consensus 167 ~~~~~l~~L~~L~L~~N~ 184 (635)
T 4g8a_A 167 EYFSNLTNLEHLDLSSNK 184 (635)
T ss_dssp GGGGGCTTCCEEECCSSC
T ss_pred hhhccchhhhhhcccCcc
Confidence 7665543 44455553
No 272
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.60 E-value=1.7e-15 Score=144.36 Aligned_cols=127 Identities=24% Similarity=0.374 Sum_probs=110.4
Q ss_pred EEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchh-HHhcCCCCCEEECcCCcCcccCccCccCCcCccccccc
Q 035917 99 LNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQ-ICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILS 177 (611)
Q Consensus 99 ~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~-~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~ 177 (611)
+.|++++++| +.+|..+.. +|+.|+|++|++++..|.. +.. +++|+.|+|++|++++.+|..++++++|++|+|+
T Consensus 11 ~~l~~s~~~l-~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGL-KEIPRDIPL--HTTELLLNDNELGRISSDGLFGR-LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCC-SSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGG-CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCc-CcCccCCCC--CCCEEECCCCcCCccCCcccccc-CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 4789999999 578876654 9999999999999765543 666 9999999999999999999999999999999999
Q ss_pred ccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCC---cccCCCCCCCCC
Q 035917 178 NNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFD---KADFDGNSDLCG 229 (611)
Q Consensus 178 ~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~---~~~~~~n~~lc~ 229 (611)
+|+|++..|..|.++++|++|+|++|++++.+|..+..++ .+.+.+|+..|.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 9999999999899999999999999999999998877654 455677775553
No 273
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.60 E-value=2.7e-15 Score=149.19 Aligned_cols=133 Identities=21% Similarity=0.205 Sum_probs=115.5
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
..++.|+|++|.+++..|..+..+++|+.|+|++|.+++..|..+.. +++|+.|+|++|++++..|..+.++++|++|+
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 137 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDH-LTQLDKLYLGGNQLKSLPSGVFDRLTKLKELR 137 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcc-cCCCCEEEcCCCcCCCcChhHhccCCcccEEE
Confidence 36889999999999988888999999999999999999655556666 99999999999999977766789999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC---CcccCCCCCCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF---DKADFDGNSDLCG 229 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~---~~~~~~~n~~lc~ 229 (611)
|++|+|++..|..|..+++|++|+|++|++++..|..+..+ ..+.+.+|+..|.
T Consensus 138 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 138 LNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999998888789999999999999999998877666554 4556778876554
No 274
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=2.2e-15 Score=143.82 Aligned_cols=124 Identities=27% Similarity=0.410 Sum_probs=101.0
Q ss_pred EEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccccc
Q 035917 101 LELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNNK 180 (611)
Q Consensus 101 l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~ 180 (611)
+++++++|. .+|..+. ++|+.|+|++|+|+ .+|..+.. +++|+.|+|++|.+++..|..+.++++|++|+|++|+
T Consensus 15 l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~-l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 15 VRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSN-YKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGG-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhc-ccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 344455555 4565543 68999999999998 78988887 9999999999999998888889999999999999999
Q ss_pred cCCCCChhhhcCCCcccccccccccCCCCCccCCC---CCcccCCCCCCCCC
Q 035917 181 LSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG---FDKADFDGNSDLCG 229 (611)
Q Consensus 181 l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~n~~lc~ 229 (611)
|++..|..|.++++|+.|+|++|++++..+..|.. +..+.+.+|+..|.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~ 141 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCD 141 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecC
Confidence 99888888999999999999999999765555554 45566778876664
No 275
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.58 E-value=5.3e-15 Score=148.94 Aligned_cols=132 Identities=21% Similarity=0.184 Sum_probs=103.8
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|.+++..+..++.+++|+.|+|++|.+++..|..+.. +++|++|+|++|++++..|..++++++|+.|+|
T Consensus 86 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 86 NLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDK-LTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhcc-CCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 5778888888888777777888888888888888888655555666 888888888888888776667788888888888
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC---CcccCCCCCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF---DKADFDGNSDLCG 229 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~---~~~~~~~n~~lc~ 229 (611)
++|++++..|..++.+++|+.|++++|++++..|..+..+ ..+.+.+|+..|.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc
Confidence 8888887777778888888888888888888777655544 4455667765543
No 276
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.58 E-value=4e-15 Score=149.61 Aligned_cols=119 Identities=24% Similarity=0.274 Sum_probs=83.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|++++..+..+..+++|++|+|++|.++ .+|..+...+++|++|+|++|.+++..|..+.++++|++|+|
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 116 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRL 116 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEEC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-eeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEEC
Confidence 3566777777777666667777778888888888777 455444323777777777777777655556677777777777
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF 216 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~ 216 (611)
++|.+++..|..|..+++|++|+|++|.+++..+..+..+
T Consensus 117 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 156 (270)
T 2o6q_A 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC
Confidence 7777777766667777777777777777776555444433
No 277
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.57 E-value=3.3e-15 Score=145.67 Aligned_cols=113 Identities=14% Similarity=0.145 Sum_probs=107.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|.+++..+..+..+++|+.|+|++|.+++..|..+.. +++|+.|+|++|++++..|..+.++++|++|+|
T Consensus 58 ~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 136 (220)
T 2v70_A 58 QLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKG-LESLKTLMLRSNRITCVGNDSFIGLSSVRLLSL 136 (220)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTT-CSSCCEEECTTSCCCCBCTTSSTTCTTCSEEEC
T ss_pred CCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcC-CcCCCEEECCCCcCCeECHhHcCCCccCCEEEC
Confidence 6889999999999998889999999999999999999777767777 999999999999999999999999999999999
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
++|+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 137 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 137 YDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999999999999999999999999999998876
No 278
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.56 E-value=9e-16 Score=139.77 Aligned_cols=121 Identities=25% Similarity=0.279 Sum_probs=103.8
Q ss_pred CcEEEEEecCCccc-ccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccc
Q 035917 96 NRILNLELREMKLS-GKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTL 174 (611)
Q Consensus 96 ~~v~~l~l~~~~l~-g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L 174 (611)
.+++.|+|++|+++ |.+|..+..+++|+.|+|++|.+++. ..+.. +++|++|+|++|.+++.+|..++++++|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~-l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPK-LNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCC-CTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhc-CCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 36889999999998 89999899999999999999999965 56666 8999999999999998899888889999999
Q ss_pred cccccccCCC-CChhhhcCCCcccccccccccCCCCC---ccCCCCCcc
Q 035917 175 ILSNNKLSGP-IPYQLSNLGRLKKFSVANNDLTGTIP---SSFKGFDKA 219 (611)
Q Consensus 175 ~L~~N~l~g~-iP~~l~~l~~L~~L~l~~N~l~g~ip---~~~~~~~~~ 219 (611)
+|++|.+++. .|..+..+++|+.|++++|.+++..+ ..+..++.+
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L 142 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQL 142 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCc
Confidence 9999999973 55789999999999999999997765 345444433
No 279
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.56 E-value=2.4e-15 Score=166.51 Aligned_cols=135 Identities=24% Similarity=0.296 Sum_probs=117.4
Q ss_pred CCcccceecCCCC----------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEE
Q 035917 82 ICQFVGVSCWNDK----------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLD 151 (611)
Q Consensus 82 ~c~w~Gv~C~~~~----------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 151 (611)
.|.|.|+ |+... ...++.|+|++|++++..|..++.+++|++|+|++|.+++..|..+.. +++|++||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~ 80 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYS-LGSLEHLD 80 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEE
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccc-cccCCEEE
Confidence 5999998 86321 136899999999999999999999999999999999999877788887 99999999
Q ss_pred CcCCcCcccCccCccCCcCcccccccccccCC-CCChhhhcCCCcccccccccccCCCCCc-cCCCCCc
Q 035917 152 LSNNDLSGPIPADLGNCTYLNTLILSNNKLSG-PIPYQLSNLGRLKKFSVANNDLTGTIPS-SFKGFDK 218 (611)
Q Consensus 152 Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g-~iP~~l~~l~~L~~L~l~~N~l~g~ip~-~~~~~~~ 218 (611)
|++|.+++..|..++++++|++|+|++|.+++ .+|..++++++|++|++++|.+.+.+|. .+.+++.
T Consensus 81 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~ 149 (549)
T 2z81_A 81 LSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTS 149 (549)
T ss_dssp CTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCE
T ss_pred CCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccc
Confidence 99999998888889999999999999999997 5778899999999999999997777774 5655543
No 280
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.55 E-value=8e-15 Score=139.92 Aligned_cols=128 Identities=24% Similarity=0.268 Sum_probs=112.6
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEEC
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDL 152 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L 152 (611)
..|.|..|.|.+.. ...++.|+|++|+++ .+|..+..+++|+.|+|++|.+++..|..+.. +++|+.|+|
T Consensus 8 C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~-l~~L~~L~L 85 (193)
T 2wfh_A 8 CTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSN-MTQLLTLIL 85 (193)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEEC
T ss_pred CEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccC-CCCCCEEEC
Confidence 35789999996431 236889999999998 78889999999999999999999766677777 999999999
Q ss_pred cCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 153 SNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 153 s~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
++|++++..|..+.++++|++|+|++|.|++..+..|..+++|+.|+|++|.+.....
T Consensus 86 s~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 86 SYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 9999998888889999999999999999997666679999999999999999987544
No 281
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.55 E-value=4.6e-15 Score=160.30 Aligned_cols=143 Identities=18% Similarity=0.262 Sum_probs=121.6
Q ss_pred CCcccc--eecCCCC-------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCch-hHHhcCCCCCEEE
Q 035917 82 ICQFVG--VSCWNDK-------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPA-QICNWLPYLVLLD 151 (611)
Q Consensus 82 ~c~w~G--v~C~~~~-------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~-~~~~~l~~L~~L~ 151 (611)
.|.|.+ |.|.+.. ..+++.|+|++|.+.+..|..++.+++|++|+|++|.+.+.+|+ .+.. +++|++|+
T Consensus 7 ~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~-l~~L~~L~ 85 (455)
T 3v47_A 7 ECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRG-LSSLIILK 85 (455)
T ss_dssp CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTT-CTTCCEEE
T ss_pred eeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccc-cccCCEEe
Confidence 577666 8886432 13689999999999999999999999999999999999988865 4665 99999999
Q ss_pred CcCCcCcccCccCccCCcCcccccccccccCCCCChh--hhcCCCcccccccccccCCCCCcc-CCCC---CcccCCCCC
Q 035917 152 LSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQ--LSNLGRLKKFSVANNDLTGTIPSS-FKGF---DKADFDGNS 225 (611)
Q Consensus 152 Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~--l~~l~~L~~L~l~~N~l~g~ip~~-~~~~---~~~~~~~n~ 225 (611)
|++|.+++.+|..++++++|++|+|++|.+++.+|.. +.++++|++|+|++|++++..|.. +.++ ..+.+.+|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999999999999999999999999999977766 899999999999999999988875 4444 445555554
No 282
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.54 E-value=1.4e-14 Score=152.18 Aligned_cols=143 Identities=22% Similarity=0.202 Sum_probs=118.3
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCccCc-CCCCCCEEEccCCCCCccCchhHHhcCCCCCEEE
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLK-FCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLD 151 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~-~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~ 151 (611)
+.|.|.-|.|.+.. ...++.|+|++|+|++..+..+. .+++|+.|+|++|+|++..|..+.. +++|+.|+
T Consensus 16 C~C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~-l~~L~~L~ 94 (361)
T 2xot_A 16 CLCASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVP-VPNLRYLD 94 (361)
T ss_dssp CEEETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEE
T ss_pred CEECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccC-CCCCCEEE
Confidence 34788899996432 12467899999999998888887 9999999999999999766667777 99999999
Q ss_pred CcCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCccC------CCCCcccCCCC
Q 035917 152 LSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSF------KGFDKADFDGN 224 (611)
Q Consensus 152 Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~------~~~~~~~~~~n 224 (611)
|++|+|++..|..+.++++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..+ .++..+.+.+|
T Consensus 95 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 95 LSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred CCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 99999998777789999999999999999998889999999999999999999997443333 33444455555
No 283
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.53 E-value=1.3e-14 Score=162.67 Aligned_cols=128 Identities=23% Similarity=0.258 Sum_probs=112.2
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++++++|++|+
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~-l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 110 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHG-LHHLSNLILTGNPIQSFSPGSFSGLTSLENLV 110 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCCCCCTTSSTTCTTCCEEE
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhc-hhhcCEeECCCCcccccChhhcCCcccCCEEE
Confidence 46889999999999998889999999999999999999877878877 99999999999999988899999999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCC-CCCccCCCCCcc---cCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTG-TIPSSFKGFDKA---DFDGN 224 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g-~ip~~~~~~~~~---~~~~n 224 (611)
|++|.+++..|..++++++|++|++++|.+++ .+|..+++++.+ .+.+|
T Consensus 111 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 111 AVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp CTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred ccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 99999998887889999999999999999986 778877665543 34444
No 284
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.51 E-value=1.8e-14 Score=155.65 Aligned_cols=133 Identities=20% Similarity=0.209 Sum_probs=119.4
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|.+.+.+|..++.+++|+.|+|++|.+++..|..+.. +++|+.|+|++|.+++..|..++++++|++|+|
T Consensus 276 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 276 GVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWG-LTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp CCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred CceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcC-cccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 5889999999999999999999999999999999999888888887 999999999999999888999999999999999
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCC---CCcccCCCCCCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG---FDKADFDGNSDLCGG 230 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~n~~lc~~ 230 (611)
++|++++..|..+.++++|++|++++|++++..+..+.. +..+.+.+|+..|..
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 999999999999999999999999999999866655554 455667788766654
No 285
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.51 E-value=1.1e-14 Score=159.06 Aligned_cols=142 Identities=25% Similarity=0.182 Sum_probs=119.9
Q ss_pred CCcccceecCCCCCCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccC
Q 035917 82 ICQFVGVSCWNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPI 161 (611)
Q Consensus 82 ~c~w~Gv~C~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~i 161 (611)
.|.+.++.|.. ...+..|+|++|.+++..|..++.+++|+.|+|++|.|+|.+|..+...+++|+.|+|++|.|++.
T Consensus 108 ~N~l~~~~~~~--l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~- 184 (487)
T 3oja_A 108 NNNISRVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV- 184 (487)
T ss_dssp SSCCCCEEECC--CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-
T ss_pred CCcCCCCCccc--cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-
Confidence 36778888853 357999999999999999999999999999999999999999988874499999999999999977
Q ss_pred ccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC---CcccCCCCCCCCC
Q 035917 162 PADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF---DKADFDGNSDLCG 229 (611)
Q Consensus 162 P~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~---~~~~~~~n~~lc~ 229 (611)
|. +..+++|+.|+|++|.|+|..| .+..+++|+.|+|++|.|++ +|..+..+ ..+.+.+|+..|+
T Consensus 185 ~~-~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 185 KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHH
T ss_pred cc-cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCc
Confidence 33 4469999999999999997555 59999999999999999996 78776554 4556777776654
No 286
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=4.4e-14 Score=131.88 Aligned_cols=107 Identities=24% Similarity=0.250 Sum_probs=92.0
Q ss_pred EEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccccccc
Q 035917 100 NLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNN 179 (611)
Q Consensus 100 ~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N 179 (611)
.|++++++|.. +|..+ .+.|+.|+|++|+|++..|..+.. +++|+.|+|++|+|++..|..+.++++|++|+|++|
T Consensus 13 ~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~-l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDR-LTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTT-CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcC-cccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 34555666664 66655 389999999999999877888887 999999999999999776667899999999999999
Q ss_pred ccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 180 KLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 180 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
+|++..|..|..+++|+.|+|++|.+++..+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9998777789999999999999999997755
No 287
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.50 E-value=7.8e-15 Score=136.37 Aligned_cols=111 Identities=27% Similarity=0.243 Sum_probs=77.2
Q ss_pred cEEEEEecCCccc-ccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 97 RILNLELREMKLS-GKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~-g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.++.|+|++|++. |.+|..+..+++|+.|+|++|.+++. ..+.. +++|+.|+|++|.+++.+|..+.++++|++|+
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPK-LPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCC-CSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhcc-CCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 4667777777776 67777677777777777777777753 45555 67777777777777766666666677777777
Q ss_pred ccccccCCC-CChhhhcCCCcccccccccccCCCCC
Q 035917 176 LSNNKLSGP-IPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 176 L~~N~l~g~-iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
|++|.+++. .+..+..+++|+.|++++|.+++..+
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~ 137 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLND 137 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTT
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHH
Confidence 777777753 22567777777777777777775544
No 288
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.50 E-value=9.8e-15 Score=167.09 Aligned_cols=159 Identities=24% Similarity=0.252 Sum_probs=76.4
Q ss_pred ChhHHHHHHHHHHhCCCC-CCCCCCCCCCCCCCCCCCcccceecCCCCCCcEEEEEec------------------CCcc
Q 035917 48 AEDDVKCLEGVKSSLNDP-QRKLSSWSFGNSTIGFICQFVGVSCWNDKENRILNLELR------------------EMKL 108 (611)
Q Consensus 48 ~~~d~~aL~~~k~~l~~~-~~~l~~W~~~~~~~~~~c~w~Gv~C~~~~~~~v~~l~l~------------------~~~l 108 (611)
...+.++|+++..++..+ ...-.+|...+ ...+.|.++++.. .+++.|+|. .+.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~s~---~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i 203 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDS---TPSGTATNSAVST---PLTPKIELFANGKDEANQALLQHKKLSQYSI 203 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCC---CccccCCCceecC---CccceEEeeCCCCCcchhhHhhcCccCcccc
Confidence 346778999998776322 12233564221 2346788877643 233333332 2222
Q ss_pred cc---------cCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccccccc
Q 035917 109 SG---------KIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNN 179 (611)
Q Consensus 109 ~g---------~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N 179 (611)
.+ .+|..+..++.|+.|+|++|.+. .||..++. +++|+.|+|++|.|+ .||..+++|++|++|+|++|
T Consensus 204 ~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N 280 (727)
T 4b8c_D 204 DEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFK-YDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHN 280 (727)
T ss_dssp ------------------CCCCCCEEECTTSCCS-CCCGGGGG-CCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTS
T ss_pred cCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcC-CCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCC
Confidence 22 12344566666777777777766 56666665 667777777777776 66666666777777777777
Q ss_pred ccCCCCChhhhcCCCcccccccccccCCCCCccCCCCC
Q 035917 180 KLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFD 217 (611)
Q Consensus 180 ~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~ 217 (611)
.|+ .+|..|++|++|++|+|++|.|+ .||.+|+++.
T Consensus 281 ~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~ 316 (727)
T 4b8c_D 281 RLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLC 316 (727)
T ss_dssp CCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCT
T ss_pred cCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCC
Confidence 766 66666666777777777777665 5666555443
No 289
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.50 E-value=4.4e-14 Score=142.31 Aligned_cols=122 Identities=20% Similarity=0.222 Sum_probs=108.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|++.+..+..+..+++|+.|+|++|.+++..|..+.. +++|++|+|++|.+++..|..+.++++|++|+|
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS-LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccC-CcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 5889999999999888888999999999999999999666667777 999999999999999888888999999999999
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCC-CCCccCCCCCcc
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTG-TIPSSFKGFDKA 219 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g-~ip~~~~~~~~~ 219 (611)
++|.+++..+..++.+++|++|++++|.+++ .+|..+++++.+
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L 151 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNL 151 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTC
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCC
Confidence 9999998877789999999999999999987 478877665443
No 290
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.50 E-value=6e-14 Score=142.72 Aligned_cols=131 Identities=29% Similarity=0.305 Sum_probs=108.1
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
..+..|+|++|.+. .+|..+..+++|+.|+|++|+|++..|..+.. +++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 77 ~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRG-LGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp TTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTT-CTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcC-CCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 36889999999988 67888899999999999999999655566776 89999999999999977666778899999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccCCC---CCcccCCCCCCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG---FDKADFDGNSDLCG 229 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~n~~lc~ 229 (611)
|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+.. +..+.+.+|+..|.
T Consensus 155 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 155 LANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 9999999666666788999999999999998 67776654 34455677876664
No 291
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.50 E-value=7.2e-14 Score=140.42 Aligned_cols=132 Identities=23% Similarity=0.230 Sum_probs=102.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+|++|.+.+..+..+..+++|+.|+|++|.+++..|..+.. +++|+.|+|++|.+++..+..++.+++|+.|+|
T Consensus 86 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 164 (270)
T 2o6q_A 86 NLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDS-LTKLTYLSLGYNELQSLPKGVFDKLTSLKELRL 164 (270)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCc-CcCCCEEECCCCcCCccCHhHccCCcccceeEe
Confidence 5778888888888766667788888888888888888655555666 888888888888888655556788888888888
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCC---CCcccCCCCCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG---FDKADFDGNSDLCG 229 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~n~~lc~ 229 (611)
++|.+++..|..|..+++|+.|++++|++++..+..+.. +..+.+.+|+..|.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 165 YNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred cCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 888888777777888888888888888888665555544 44456677776554
No 292
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.50 E-value=4.7e-15 Score=167.51 Aligned_cols=126 Identities=18% Similarity=0.317 Sum_probs=111.9
Q ss_pred CcEEEEEecCCccccc-----------------CCccCc--CCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCc
Q 035917 96 NRILNLELREMKLSGK-----------------IPEPLK--FCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNND 156 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~-----------------~p~~l~--~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 156 (611)
..++.|+|++|.++|. +|+.++ ++++|++|+|++|++.|.+|..+++ +++|+.|+|++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKA-LPEMQLINVACNR 284 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTT-CSSCCEEECTTCT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhc-CCCCCEEECcCCC
Confidence 3688999999999996 999999 9999999999999999999999998 9999999999998
Q ss_pred -Ccc-cCccCccCC------cCcccccccccccCCCCCh--hhhcCCCcccccccccccCCCCCccCCCCC---cccCCC
Q 035917 157 -LSG-PIPADLGNC------TYLNTLILSNNKLSGPIPY--QLSNLGRLKKFSVANNDLTGTIPSSFKGFD---KADFDG 223 (611)
Q Consensus 157 -l~G-~iP~~~~~l------~~L~~L~L~~N~l~g~iP~--~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~---~~~~~~ 223 (611)
|+| .+|..++++ ++|++|+|++|+++ .+|. .++++++|+.|++++|+++|.+| .++.++ .+.+.+
T Consensus 285 ~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~ 362 (636)
T 4eco_A 285 GISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAY 362 (636)
T ss_dssp TSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCS
T ss_pred CCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCC
Confidence 999 999998887 99999999999999 8998 89999999999999999999999 665443 344444
Q ss_pred C
Q 035917 224 N 224 (611)
Q Consensus 224 n 224 (611)
|
T Consensus 363 N 363 (636)
T 4eco_A 363 N 363 (636)
T ss_dssp S
T ss_pred C
Confidence 4
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.50 E-value=2.4e-14 Score=146.44 Aligned_cols=142 Identities=20% Similarity=0.244 Sum_probs=117.1
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCC--ccCchhHHhcCCCCCEE
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLS--GNIPAQICNWLPYLVLL 150 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~--g~ip~~~~~~l~~L~~L 150 (611)
+.|.|.+|.|.+.. ...++.|+|++|++....+..+..+++|+.|+|++|.++ |.+|..+.. +++|++|
T Consensus 5 C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~-~~~L~~L 83 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFG-TTSLKYL 83 (306)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHS-CSCCCEE
T ss_pred CeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccccc-ccccCEE
Confidence 35899999997532 236889999999999544445899999999999999998 445778877 8999999
Q ss_pred ECcCCcCcccCccCccCCcCcccccccccccCCCCC-hhhhcCCCcccccccccccCCCCCccCCCCCc---ccCCCC
Q 035917 151 DLSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIP-YQLSNLGRLKKFSVANNDLTGTIPSSFKGFDK---ADFDGN 224 (611)
Q Consensus 151 ~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP-~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~---~~~~~n 224 (611)
+|++|.++ .+|..+.++++|++|+|++|.+++..+ ..+..+++|++|++++|.+++..|..+..++. +.+.+|
T Consensus 84 ~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 84 DLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp ECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTC
T ss_pred ECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCC
Confidence 99999998 578889999999999999999997665 57899999999999999999888877765443 444444
No 294
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.50 E-value=2.3e-14 Score=159.21 Aligned_cols=109 Identities=27% Similarity=0.323 Sum_probs=101.5
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+|++|+|++ +|. ++.|++|+.|+|++|.|+ .||..++. +++|+.|+|++|+|++ || .++++++|++|+|
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~-l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~L 515 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA-LRCLEVLQASDNALEN-VD-GVANLPRLQELLL 515 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG-CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEEC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc-CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEEC
Confidence 46689999999998 665 999999999999999999 89999998 9999999999999997 88 8999999999999
Q ss_pred cccccCCCC-ChhhhcCCCcccccccccccCCCCCc
Q 035917 177 SNNKLSGPI-PYQLSNLGRLKKFSVANNDLTGTIPS 211 (611)
Q Consensus 177 ~~N~l~g~i-P~~l~~l~~L~~L~l~~N~l~g~ip~ 211 (611)
++|+|++.+ |..|+.+++|+.|+|++|+|++.+|.
T Consensus 516 s~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 516 CNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 999999987 99999999999999999999988663
No 295
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.49 E-value=2.2e-14 Score=146.72 Aligned_cols=131 Identities=18% Similarity=0.260 Sum_probs=90.6
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCc-cCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSG-NIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g-~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.+..|+|++|.+.+..|..+..+++|+.|+|++|.+++ .+|..+.. +++|+.|+|++|.+++..|..+.++++|+.|+
T Consensus 127 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 205 (306)
T 2z66_A 127 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE-LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205 (306)
T ss_dssp TCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhh-CcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE
Confidence 56677777777777777677777777777777777766 45666665 77777777777777776677777777777777
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC----CcccCCCCCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF----DKADFDGNSDLC 228 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~----~~~~~~~n~~lc 228 (611)
|++|.+++..+..+..+++|+.|++++|++++.+|..+..+ ..+.+.+|+..|
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 77777776666667777777777777777777777665443 234455555333
No 296
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=6.5e-14 Score=131.27 Aligned_cols=106 Identities=23% Similarity=0.243 Sum_probs=92.8
Q ss_pred EEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccc
Q 035917 99 LNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSN 178 (611)
Q Consensus 99 ~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~ 178 (611)
+.+++++++| +.+|..+. ++|+.|+|++|.|++..|..+.. +++|+.|+|++|+|++..|..+.++++|++|+|++
T Consensus 15 ~~l~~~~n~l-~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 15 TLVNCQNIRL-ASVPAGIP--TDKQRLWLNNNQITKLEPGVFDH-LVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SEEECCSSCC-SSCCSCCC--TTCSEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred cEEEeCCCCC-CccCCCcC--CCCcEEEeCCCCccccCHHHhcC-CcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 4688899988 46787664 89999999999999877888887 99999999999999975555678999999999999
Q ss_pred cccCCCCChhhhcCCCcccccccccccCCC
Q 035917 179 NKLSGPIPYQLSNLGRLKKFSVANNDLTGT 208 (611)
Q Consensus 179 N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ 208 (611)
|+|++..|..|..+++|++|+|++|.++..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 999977666799999999999999998854
No 297
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.49 E-value=2.8e-14 Score=144.39 Aligned_cols=131 Identities=22% Similarity=0.268 Sum_probs=84.7
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
++..|+|++|.+.+..|..+..+++|+.|+|++|.+++..+..+.. +++|+.|+|++|.+++..+..+.++++|+.|+|
T Consensus 106 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 184 (285)
T 1ozn_A 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRD-LGNLTHLFLHGNRISSVPERAFRGLHSLDRLLL 184 (285)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhcc-CCCccEEECCCCcccccCHHHhcCccccCEEEC
Confidence 4666777777777666666677777777777777776444444555 677777777777776555555666777777777
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCC---CCcccCCCCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG---FDKADFDGNSDLC 228 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~n~~lc 228 (611)
++|.+++..|..+..+++|+.|++++|++++..|..+.. +..+.+.+|+..|
T Consensus 185 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 185 HQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVC 239 (285)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEEC
T ss_pred CCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccC
Confidence 777777666777777777777777777777655444433 3334455555444
No 298
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.49 E-value=9.3e-14 Score=140.56 Aligned_cols=128 Identities=24% Similarity=0.266 Sum_probs=108.7
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCc-CcccCccCccCCcCcccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNND-LSGPIPADLGNCTYLNTL 174 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~-l~G~iP~~~~~l~~L~~L 174 (611)
..++.|+|++|++.+..+..+..+++|+.|+|++|.+++..|..+.. +++|++|+|++|. +++..|..+.++++|++|
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTG-LALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCC-ccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 36789999999999888888999999999999999999877888887 8999999999997 766667889999999999
Q ss_pred cccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCC---cccCCCC
Q 035917 175 ILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFD---KADFDGN 224 (611)
Q Consensus 175 ~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~---~~~~~~n 224 (611)
+|++|.+++..|..+.++++|++|++++|++++..+..++.++ .+.+.+|
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 163 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCC
Confidence 9999999988888899999999999999999977766665443 4445555
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.48 E-value=2.4e-14 Score=149.70 Aligned_cols=141 Identities=24% Similarity=0.303 Sum_probs=114.0
Q ss_pred CCCcccceecCCCC----------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEE
Q 035917 81 FICQFVGVSCWNDK----------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLL 150 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~----------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L 150 (611)
.+|.|.|+ |+-+. ...++.|+|++|++.+..+..+..+++|+.|+|++|.+++..|..+.. +++|++|
T Consensus 28 ~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L 105 (353)
T 2z80_A 28 LSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSS-LGSLEHL 105 (353)
T ss_dssp CEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEE
T ss_pred CCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCC-CCCCCEE
Confidence 46999998 75221 136889999999999877778999999999999999999877777887 9999999
Q ss_pred ECcCCcCcccCccCccCCcCcccccccccccCCCCCh--hhhcCCCcccccccccc-cCCCCCccCCCCCc---ccCCCC
Q 035917 151 DLSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPY--QLSNLGRLKKFSVANND-LTGTIPSSFKGFDK---ADFDGN 224 (611)
Q Consensus 151 ~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~--~l~~l~~L~~L~l~~N~-l~g~ip~~~~~~~~---~~~~~n 224 (611)
+|++|.+++..+..++++++|++|+|++|.+++ +|. .+..+++|++|++++|+ +++..|..+.+++. +.+.+|
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n 184 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKT-LGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDAS 184 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSS-SCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEET
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcc-cCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCC
Confidence 999999996555558999999999999999995 554 78999999999999995 55555666665544 344444
No 300
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.48 E-value=9.9e-14 Score=139.58 Aligned_cols=114 Identities=24% Similarity=0.194 Sum_probs=102.9
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
..+..|+|++|++++..+..++.+++|+.|+|++|.+++..|..+.. +++|+.|+|++|++++..|..++++++|+.|+
T Consensus 109 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 187 (272)
T 3rfs_A 109 TNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDK-LTNLTELDLSYNQLQSLPEGVFDKLTQLKDLR 187 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhcc-CccCCEEECCCCCcCccCHHHhcCCccCCEEE
Confidence 36889999999999888888999999999999999999655555666 99999999999999988777789999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
|++|.+++..|..+..+++|+.|++++|.++|..|
T Consensus 188 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 222 (272)
T 3rfs_A 188 LYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222 (272)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCCcCCccCHHHHhCCcCCCEEEccCCCccccCc
Confidence 99999999888889999999999999999888776
No 301
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.48 E-value=3.2e-14 Score=159.51 Aligned_cols=120 Identities=17% Similarity=0.148 Sum_probs=86.5
Q ss_pred EEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccccc
Q 035917 98 ILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILS 177 (611)
Q Consensus 98 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~ 177 (611)
+..++++++.+....+..+..+++|+.|+|++|.+++..|..+.. +++|+.|+|++|.+++..|..++++++|++|+|+
T Consensus 53 l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 53 QKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY-AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred ceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcC-CCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 456777777776655555677777888888888777666666666 7778888888888777766677777788888888
Q ss_pred ccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCCc
Q 035917 178 NNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDK 218 (611)
Q Consensus 178 ~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~ 218 (611)
+|.|++..|..|+++++|++|+|++|.+++..|..+++++.
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 172 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTS 172 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTT
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCc
Confidence 88777555555677777888888888777777766655443
No 302
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.48 E-value=5.3e-14 Score=137.07 Aligned_cols=113 Identities=22% Similarity=0.280 Sum_probs=103.5
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
..+..|+|++|.+++..|..+..+++|+.|+|++|.|+ .+|+.+...+++|+.|+|++|.+++..|..+.++++|++|+
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 134 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLS 134 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEE
Confidence 36889999999999999999999999999999999999 56665433399999999999999999999999999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTI 209 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~i 209 (611)
|++|+|++..|..|..+++|+.|+|++|.+...-
T Consensus 135 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 135 LYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 9999999988888999999999999999998653
No 303
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.48 E-value=7.8e-14 Score=134.33 Aligned_cols=113 Identities=24% Similarity=0.178 Sum_probs=78.4
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|++.+..+..+..+++|++|+|++|.+++..+..+.. +++|++|+|++|++++..|..+.++++|+.|+|
T Consensus 53 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 131 (208)
T 2o6s_A 53 SLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDK-LTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcC-ccCCCEEEcCCCcCcccCHhHhccCCcCCEEEC
Confidence 4667777777777655555677777777777777777433334455 777777777777777655555677777777777
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
++|.+++..+..+..+++|+.|++++|.+.+..|
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 165 (208)
T 2o6s_A 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165 (208)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT
T ss_pred CCCccceeCHHHhccCCCccEEEecCCCeecCCC
Confidence 7777776666556777777777777766555444
No 304
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.47 E-value=7.1e-14 Score=152.09 Aligned_cols=134 Identities=24% Similarity=0.272 Sum_probs=117.8
Q ss_pred cccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCC
Q 035917 84 QFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNN 155 (611)
Q Consensus 84 ~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N 155 (611)
.|..|.|.+.. ...++.|+|++|++.+..|..+..+++|+.|+|++|.+++..|..+.. +++|++|+|++|
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~n 90 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNN-LFNLRTLGLRSN 90 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEECCSS
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhC-CccCCEEECCCC
Confidence 37889996431 235789999999999999999999999999999999999888888888 999999999999
Q ss_pred cCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCCc
Q 035917 156 DLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDK 218 (611)
Q Consensus 156 ~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~ 218 (611)
++++..+..++++++|++|+|++|.+++..|..|.++++|+.|++++|.+++..|..|.++..
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 153 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNS 153 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTT
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCC
Confidence 999665566899999999999999999999999999999999999999999888877766544
No 305
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.47 E-value=2.9e-14 Score=149.66 Aligned_cols=133 Identities=21% Similarity=0.180 Sum_probs=111.8
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.++..|+|++|+|++..+..+..+++|+.|+|++|+|++..|..+.. +++|+.|+|++|++++..|..+.++++|+.|+
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~ 142 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSD-LQALEVLLLYNNHIVVVDRNAFEDMAQLQKLY 142 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCC-CcCCCEEECCCCcccEECHHHhCCcccCCEEE
Confidence 46889999999999998889999999999999999999655556666 99999999999999998899999999999999
Q ss_pred ccccccCCCCChhh---hcCCCcccccccccccCCCCCccCCCCC-----cccCCCCCCCCC
Q 035917 176 LSNNKLSGPIPYQL---SNLGRLKKFSVANNDLTGTIPSSFKGFD-----KADFDGNSDLCG 229 (611)
Q Consensus 176 L~~N~l~g~iP~~l---~~l~~L~~L~l~~N~l~g~ip~~~~~~~-----~~~~~~n~~lc~ 229 (611)
|++|+|++..+..+ ..+++|+.|+|++|+|++..+..+..++ .+.+.+|+..|.
T Consensus 143 L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 143 LSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 99999996444444 6799999999999999976555555543 356778876664
No 306
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.47 E-value=1.7e-14 Score=165.02 Aligned_cols=115 Identities=30% Similarity=0.487 Sum_probs=107.7
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
..+..|+|++|.+. .+|+.+..|++|+.|+|++|.|+ .||..++. |++|++|||++|.|+ .||..+++|++|++|+
T Consensus 224 ~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 299 (727)
T 4b8c_D 224 QLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKN-LSNLRVLDLSHNRLT-SLPAELGSCFQLKYFY 299 (727)
T ss_dssp CCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGG-GTTCCEEECTTSCCS-SCCSSGGGGTTCSEEE
T ss_pred CCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhC-CCCCCEEeCcCCcCC-ccChhhcCCCCCCEEE
Confidence 46889999999998 88989999999999999999999 89999988 999999999999999 8999999999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG 215 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~ 215 (611)
|++|.|+ .||..|++|++|+.|+|++|.|+|.+|..+..
T Consensus 300 L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 338 (727)
T 4b8c_D 300 FFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTE 338 (727)
T ss_dssp CCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHH
T ss_pred CCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhh
Confidence 9999997 88999999999999999999999999987754
No 307
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.47 E-value=3.1e-14 Score=159.63 Aligned_cols=131 Identities=19% Similarity=0.176 Sum_probs=71.6
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCcc-CchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGN-IPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~-ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.++.|+|++|.+.+.+|..++.+++|+.|+|++|.+++. +|..+.. +++|+.|+|++|++++.+|..++++++|+.|+
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 503 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFAN-TTNLTFLDLSKCQLEQISWGVFDTLHRLQLLN 503 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhcc-CCCCCEEECCCCcCCccChhhhcccccCCEEE
Confidence 344555555555555555555555555555555555553 4444444 55555556655555555555555555666666
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccCCC----CCcccCCCCCCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG----FDKADFDGNSDLCG 229 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~----~~~~~~~~n~~lc~ 229 (611)
|++|++++.+|..+.++++|+.|++++|+++ .+|..+.. +..+.+.+|+..|.
T Consensus 504 Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 504 MSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp CCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred CCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccC
Confidence 6666665555555555566666666666655 45544433 22334555555543
No 308
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.47 E-value=1.1e-13 Score=157.38 Aligned_cols=128 Identities=22% Similarity=0.251 Sum_probs=112.6
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.+++.|+|++|++.+..+..++.+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..+..++++++|++|+
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQK-LPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHH-CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhc-ccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 47899999999999988888999999999999999999888888888 99999999999999965555799999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCCc---ccCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDK---ADFDGN 224 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~---~~~~~n 224 (611)
|++|.+++..|..|+++++|++|++++|.+++..|..+++++. +.+.+|
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 9999999888888999999999999999999998887765543 344554
No 309
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.47 E-value=6.9e-14 Score=163.13 Aligned_cols=131 Identities=22% Similarity=0.242 Sum_probs=107.3
Q ss_pred CcccceecCCCCCCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccC-chhHHhcCCCCCEEECcCCcCcccC
Q 035917 83 CQFVGVSCWNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNI-PAQICNWLPYLVLLDLSNNDLSGPI 161 (611)
Q Consensus 83 c~w~Gv~C~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~i-p~~~~~~l~~L~~L~Ls~N~l~G~i 161 (611)
|.|..|.+ - ..+++.|+|++|.+++..|..+..+++|++|+|++|++.+.| |..+.+ +++|++|+|++|.+++..
T Consensus 14 ~~L~~vP~-l--p~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~-L~~L~~L~Ls~N~l~~~~ 89 (844)
T 3j0a_A 14 CNLTQVPQ-V--LNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRN-LPNLRILDLGSSKIYFLH 89 (844)
T ss_dssp CCSSCCCS-S--CTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSS-CTTCCEEECTTCCCCEEC
T ss_pred CCCCCCCC-C--CCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcC-CCCCCEEECCCCcCcccC
Confidence 56777776 2 357889999999999988888999999999999999888888 556666 888999999999998888
Q ss_pred ccCccCCcCcccccccccccCCCCChh--hhcCCCcccccccccccCCCCC-ccCCCCC
Q 035917 162 PADLGNCTYLNTLILSNNKLSGPIPYQ--LSNLGRLKKFSVANNDLTGTIP-SSFKGFD 217 (611)
Q Consensus 162 P~~~~~l~~L~~L~L~~N~l~g~iP~~--l~~l~~L~~L~l~~N~l~g~ip-~~~~~~~ 217 (611)
|..++++++|++|+|++|.+++.+|.. +.++++|++|+|++|.+++..| ..+++++
T Consensus 90 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~ 148 (844)
T 3j0a_A 90 PDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLN 148 (844)
T ss_dssp TTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCS
T ss_pred HhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCC
Confidence 888888899999999999888877765 8888888888888888887665 3454443
No 310
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.47 E-value=9.2e-14 Score=136.21 Aligned_cols=113 Identities=21% Similarity=0.151 Sum_probs=101.6
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
..++.|+|++|+|++..+..+..+++|+.|+|++|.|++..+..+.. +++|+.|+|++|+|+ .+|..+.++++|++|+
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~-l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~ 141 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDR-LVHLKELFMCCNKLT-ELPRGIERLTHLTHLA 141 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCC-SCCTTGGGCTTCSEEE
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCc-chhhCeEeccCCccc-ccCcccccCCCCCEEE
Confidence 36889999999997666667899999999999999999654555566 999999999999999 8999999999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
|++|+|++..+..|..+++|+.|+|++|.+++..+
T Consensus 142 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 142 LDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred CCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999998777889999999999999999998876
No 311
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.46 E-value=2.8e-13 Score=127.01 Aligned_cols=126 Identities=24% Similarity=0.271 Sum_probs=102.7
Q ss_pred EEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccc
Q 035917 99 LNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSN 178 (611)
Q Consensus 99 ~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~ 178 (611)
+.++++++++.. +|..+ .++|+.|+|++|++++..|..+.. +++|++|+|++|++++..|..++++++|++|+|++
T Consensus 10 ~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDK-LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTT-CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcC-cccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 478899998874 45433 479999999999999655555666 99999999999999977666789999999999999
Q ss_pred cccCCCCChhhhcCCCcccccccccccCCCCCccCCC---CCcccCCCCCCCC
Q 035917 179 NKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG---FDKADFDGNSDLC 228 (611)
Q Consensus 179 N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~n~~lc 228 (611)
|.|++..|..+..+++|+.|++++|++++..+..+.. +..+.+.+|+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 9999888888899999999999999999766655554 4455677776444
No 312
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.45 E-value=6.6e-14 Score=157.12 Aligned_cols=132 Identities=18% Similarity=0.273 Sum_probs=118.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCcc-CchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGN-IPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~-ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.+..++++.|.+.+..|..+..++.|+.|+|++|++.+. +|..+.. +++|++|||++|++++.+|..++++++|++|+
T Consensus 446 ~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~-l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 446 NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTE-LRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred ccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhh-ccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 567889999999999999999999999999999986544 5666766 99999999999999999999999999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC----CcccCCCCCCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF----DKADFDGNSDLCG 229 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~----~~~~~~~n~~lc~ 229 (611)
|++|+|++..|..|.++++|++|+|++|+|++.+|..+..+ ..+.+.+|+..|.
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999999999999999999999999999999999887654 4566788887775
No 313
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.45 E-value=1.2e-13 Score=143.94 Aligned_cols=112 Identities=19% Similarity=0.166 Sum_probs=95.7
Q ss_pred CcccceecCCCCCCcEEEEEecCCcccccCCccCcCCCCCCEEEccC-CCCCccCchhHHhcCCCCCEEECcCCcCcccC
Q 035917 83 CQFVGVSCWNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSA-NDLSGNIPAQICNWLPYLVLLDLSNNDLSGPI 161 (611)
Q Consensus 83 c~w~Gv~C~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~-N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~i 161 (611)
|.|..|.|.+ .|+|.+ +|. |..+++|+.|+|++ |.|++..|..|.. |++|+.|+|++|+|+|..
T Consensus 8 C~~~~v~~~~------------~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~-l~~L~~L~l~~N~l~~~~ 72 (347)
T 2ifg_A 8 HGSSGLRCTR------------DGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRG-LGELRNLTIVKSGLRFVA 72 (347)
T ss_dssp SSSSCEECCS------------SCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCS-CCCCSEEECCSSCCCEEC
T ss_pred ccCCEEEcCC------------CCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhcc-ccCCCEEECCCCccceeC
Confidence 8888888842 125664 777 99999999999996 9999776677877 999999999999999999
Q ss_pred ccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 162 PADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 162 P~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
|..|++|++|+.|+|++|+|++..|..+..++ |+.|+|++|.|.....
T Consensus 73 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 73 PDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCSCA 120 (347)
T ss_dssp TTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCCGG
T ss_pred HHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCCCc
Confidence 99999999999999999999976666666665 9999999999986543
No 314
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=3.2e-14 Score=164.83 Aligned_cols=126 Identities=18% Similarity=0.257 Sum_probs=111.9
Q ss_pred CcEEEEEecCCcccc-----------------cCCccCc--CCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCc
Q 035917 96 NRILNLELREMKLSG-----------------KIPEPLK--FCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNND 156 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g-----------------~~p~~l~--~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 156 (611)
..++.|+|++|.|+| .+|+.++ +|++|+.|+|++|++.|.+|..+.. +++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~-L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYD-LPELQSLNIACNR 526 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGG-CSSCCEEECTTCT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhC-CCCCCEEECcCCC
Confidence 368899999999999 4999988 9999999999999999999999998 9999999999998
Q ss_pred -Ccc-cCccCccCCc-------CcccccccccccCCCCCh--hhhcCCCcccccccccccCCCCCccCCCCCc---ccCC
Q 035917 157 -LSG-PIPADLGNCT-------YLNTLILSNNKLSGPIPY--QLSNLGRLKKFSVANNDLTGTIPSSFKGFDK---ADFD 222 (611)
Q Consensus 157 -l~G-~iP~~~~~l~-------~L~~L~L~~N~l~g~iP~--~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~---~~~~ 222 (611)
|+| .+|..+++++ +|+.|+|++|+|+ .+|. .++++++|+.|+|++|+++ .|| .+++++. +.+.
T Consensus 527 ~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 527 GISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp TSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECC
T ss_pred CcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECc
Confidence 999 9998887776 9999999999999 9998 8999999999999999999 888 6665543 4455
Q ss_pred CCC
Q 035917 223 GNS 225 (611)
Q Consensus 223 ~n~ 225 (611)
+|.
T Consensus 604 ~N~ 606 (876)
T 4ecn_A 604 YNQ 606 (876)
T ss_dssp SSC
T ss_pred CCc
Confidence 554
No 315
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.44 E-value=3.3e-13 Score=139.71 Aligned_cols=140 Identities=22% Similarity=0.264 Sum_probs=118.0
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEEC
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDL 152 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L 152 (611)
+.|.|..+.|.+.. ...++.|+|++|++.+..|..+..+++|+.|+|++|.+++..|..+.. +++|++|+|
T Consensus 31 c~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L 109 (332)
T 2ft3_A 31 CHCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSP-LRKLQKLYI 109 (332)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTT-CTTCCEEEC
T ss_pred CcccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhC-cCCCCEEEC
Confidence 34789999996432 136789999999999988889999999999999999999888888888 999999999
Q ss_pred cCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccC--CCCCccCCCC--CcccCCCC
Q 035917 153 SNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLT--GTIPSSFKGF--DKADFDGN 224 (611)
Q Consensus 153 s~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~--g~ip~~~~~~--~~~~~~~n 224 (611)
++|.++ .+|..+. ++|++|+|++|.+++..+..+.++++|+.|++++|.++ |..|..+..+ ..+.+.+|
T Consensus 110 ~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n 182 (332)
T 2ft3_A 110 SKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEA 182 (332)
T ss_dssp CSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSS
T ss_pred CCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCC
Confidence 999998 7888776 89999999999999777778999999999999999996 4667666643 33444444
No 316
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.43 E-value=4e-14 Score=156.84 Aligned_cols=122 Identities=27% Similarity=0.388 Sum_probs=99.8
Q ss_pred cccce-ecCCCCCCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCc
Q 035917 84 QFVGV-SCWNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIP 162 (611)
Q Consensus 84 ~w~Gv-~C~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP 162 (611)
.|.|+ .|.. ++++.|+|++|+|++ +|+.+. ++|+.|+|++|+|+ .|| .. +++|+.|+|++|+|++ ||
T Consensus 49 ~~~~l~~C~~---~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~-l~~L~~L~Ls~N~l~~-ip 116 (571)
T 3cvr_A 49 AVSLLKECLI---NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---EL-PASLEYLDACDNRLST-LP 116 (571)
T ss_dssp HHHHHHHHHH---TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CC-CTTCCEEECCSSCCSC-CC
T ss_pred hhhhcccccc---CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cc-cCCCCEEEccCCCCCC-cc
Confidence 79999 7853 478999999999998 887663 78999999999999 788 23 7899999999999997 88
Q ss_pred cCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCCcccCCCCC
Q 035917 163 ADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDKADFDGNS 225 (611)
Q Consensus 163 ~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~n~ 225 (611)
. +.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|..+.++..+.+.+|.
T Consensus 117 ~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 117 E-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSVRNNQ 171 (571)
T ss_dssp C-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSC
T ss_pred h-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEECCCCC
Confidence 7 665 89999999999987 776 67888888888888887 77766666666666664
No 317
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.43 E-value=1.1e-13 Score=139.26 Aligned_cols=118 Identities=16% Similarity=0.212 Sum_probs=93.6
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|.+.+..+..+..+++|+.|+|++|.+++..|..+.. +++|+.|+|++|++++..+..++++++|++|+|
T Consensus 53 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSG-LSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT-CTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcC-CccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 5778888888888777777888888888888888888766666766 888888888888888766667888888888888
Q ss_pred cccccCC-CCChhhhcCCCcccccccccccCCCCCccCCC
Q 035917 177 SNNKLSG-PIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG 215 (611)
Q Consensus 177 ~~N~l~g-~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~ 215 (611)
++|.+++ .+|..++++++|+.|++++|++++..+..+..
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 171 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV 171 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhh
Confidence 8888876 46888888888888888888888766655543
No 318
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.42 E-value=4.3e-14 Score=145.24 Aligned_cols=127 Identities=21% Similarity=0.258 Sum_probs=108.0
Q ss_pred cEEEEEecCCcccccCCccC--cCCCCCCEEEccCCCCCccCchhHHhcC-----CCCCEEECcCCcCcccCccCccCCc
Q 035917 97 RILNLELREMKLSGKIPEPL--KFCKSMQRLDLSANDLSGNIPAQICNWL-----PYLVLLDLSNNDLSGPIPADLGNCT 169 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l--~~l~~L~~L~Ls~N~l~g~ip~~~~~~l-----~~L~~L~Ls~N~l~G~iP~~~~~l~ 169 (611)
+++.|+|++|+++|.+|..+ +.+++|+.|+|++|.+++. |..+.. + ++|++|+|++|++++..|..+++++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~-l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAE-LQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHH-HHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHH-HHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 68899999999999999987 8999999999999999987 888877 5 8999999999999988889999999
Q ss_pred CcccccccccccCCC--CChhh--hcCCCcccccccccccCC--CCCcc----CCCCCcccCCCCC
Q 035917 170 YLNTLILSNNKLSGP--IPYQL--SNLGRLKKFSVANNDLTG--TIPSS----FKGFDKADFDGNS 225 (611)
Q Consensus 170 ~L~~L~L~~N~l~g~--iP~~l--~~l~~L~~L~l~~N~l~g--~ip~~----~~~~~~~~~~~n~ 225 (611)
+|++|+|++|+++|. +|..+ ..+++|+.|++++|++++ .+|.. +.++..+.+.+|.
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~ 239 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNS 239 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCc
Confidence 999999999999887 34455 889999999999999984 34432 2566666777764
No 319
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.42 E-value=3.8e-13 Score=137.95 Aligned_cols=112 Identities=19% Similarity=0.230 Sum_probs=58.3
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCcc--CchhH--HhcCCCCCEEECcCCcCcccCcc---C-ccCC
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGN--IPAQI--CNWLPYLVLLDLSNNDLSGPIPA---D-LGNC 168 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~--ip~~~--~~~l~~L~~L~Ls~N~l~G~iP~---~-~~~l 168 (611)
+++.|+|++|.+.+..|..++.+++|++|+|++|++.|. +|... .. +++|++|+|++|+++ .+|. . ++++
T Consensus 146 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~-l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 146 GLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHK-FPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp CCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTS-SCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred CCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhc-CCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 466667777776666666666666777777777666542 22111 22 445555555555554 1121 1 2444
Q ss_pred cCcccccccccccCCCCChhhhcC---CCcccccccccccCCCCCc
Q 035917 169 TYLNTLILSNNKLSGPIPYQLSNL---GRLKKFSVANNDLTGTIPS 211 (611)
Q Consensus 169 ~~L~~L~L~~N~l~g~iP~~l~~l---~~L~~L~l~~N~l~g~ip~ 211 (611)
++|++|||++|+|++.+|..++.+ ++|++|+|++|+++ .+|.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~ 268 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPK 268 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCS
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhh
Confidence 555555555555555544444443 35555555555555 3443
No 320
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.42 E-value=4e-13 Score=124.71 Aligned_cols=111 Identities=23% Similarity=0.226 Sum_probs=99.1
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCccc-CccCccCCcCccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGP-IPADLGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~-iP~~~~~l~~L~~L~ 175 (611)
.++.|+|++|.+++. ..++.+++|+.|+|++|.+++.+|..+.. +++|+.|+|++|.+++. .+..+..+++|++|+
T Consensus 50 ~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 50 NLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEK-LPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHH-CTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhh-CCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 688999999999987 78999999999999999999888988887 99999999999999864 337899999999999
Q ss_pred ccccccCCCCC---hhhhcCCCcccccccccccCCCCCc
Q 035917 176 LSNNKLSGPIP---YQLSNLGRLKKFSVANNDLTGTIPS 211 (611)
Q Consensus 176 L~~N~l~g~iP---~~l~~l~~L~~L~l~~N~l~g~ip~ 211 (611)
|++|.+++..+ ..+..+++|++|++++|.+. .+|.
T Consensus 127 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 127 LFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp CCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred eeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 99999997766 57899999999999999886 4454
No 321
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.42 E-value=1.6e-13 Score=131.13 Aligned_cols=106 Identities=21% Similarity=0.312 Sum_probs=52.6
Q ss_pred EEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccccc
Q 035917 98 ILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILS 177 (611)
Q Consensus 98 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~ 177 (611)
++.|+|++|.+ ..++.+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++++++|++|+|+
T Consensus 68 L~~L~l~~n~~--~~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~-l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~ 144 (197)
T 4ezg_A 68 IKDLTINNIHA--TNYNPISGLSNLERLRIMGKDVTSDKIPNLSG-LTSLTLLDISHSAHDDSILTKINTLPKVNSIDLS 144 (197)
T ss_dssp CSEEEEESCCC--SCCGGGTTCTTCCEEEEECTTCBGGGSCCCTT-CTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECC
T ss_pred CCEEEccCCCC--CcchhhhcCCCCCEEEeECCccCcccChhhcC-CCCCCEEEecCCccCcHhHHHHhhCCCCCEEEcc
Confidence 44555555532 22234455555555555555555444444444 5555555555555555455555555555555555
Q ss_pred ccccCCCCChhhhcCCCcccccccccccCC
Q 035917 178 NNKLSGPIPYQLSNLGRLKKFSVANNDLTG 207 (611)
Q Consensus 178 ~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g 207 (611)
+|.+.+.+| .+..+++|+.|++++|++++
T Consensus 145 ~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~ 173 (197)
T 4ezg_A 145 YNGAITDIM-PLKTLPELKSLNIQFDGVHD 173 (197)
T ss_dssp SCTBCCCCG-GGGGCSSCCEEECTTBCCCC
T ss_pred CCCCccccH-hhcCCCCCCEEECCCCCCcC
Confidence 554333444 34555555555555555544
No 322
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.42 E-value=4.9e-14 Score=164.43 Aligned_cols=130 Identities=23% Similarity=0.234 Sum_probs=102.2
Q ss_pred cEEEEEecCCcccccCCc-cCcCCCCCCEEEccCCCCC-----ccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcC
Q 035917 97 RILNLELREMKLSGKIPE-PLKFCKSMQRLDLSANDLS-----GNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTY 170 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~-~l~~l~~L~~L~Ls~N~l~-----g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~ 170 (611)
+++.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..+.. +++|+.|+|++|+|++.+|..+.++++
T Consensus 427 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 505 (844)
T 3j0a_A 427 HLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEG-LSHLQVLYLNHNYLNSLPPGVFSHLTA 505 (844)
T ss_dssp TCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSC-BCCEECCCCCHHHHTTCCTTSSSSCCS
T ss_pred ccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcC-cccccEEECCCCcccccChhHccchhh
Confidence 456677777777765443 2455777888888888776 333444555 788889999999998888888888999
Q ss_pred cccccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCCcccCCCCCCCCC
Q 035917 171 LNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDKADFDGNSDLCG 229 (611)
Q Consensus 171 L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~n~~lc~ 229 (611)
|+.|+|++|+|++..|..+. ++|+.|+|++|+|+|.+|..+.++..+.+.+|+..|.
T Consensus 506 L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 506 LRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICE 562 (844)
T ss_dssp CSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCS
T ss_pred hheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccc
Confidence 99999999999877666655 7899999999999999999988888888999998884
No 323
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.41 E-value=2.6e-13 Score=152.05 Aligned_cols=127 Identities=24% Similarity=0.254 Sum_probs=112.6
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+|++|.+.+..|..++.+++|+.|+|++|.+++..|..++. +++|++|+|++|.|++..|..++++++|++|+|
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQN-VPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcC-CCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 5778999999999999999999999999999999999877777777 999999999999999555555799999999999
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCCcccCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDKADFDGN 224 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~n 224 (611)
++|.|++..|..|+++++|+.|++++|.+++.-+..+.++..+.+.+|
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n 202 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 202 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSS
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccC
Confidence 999999999999999999999999999999876666666666666555
No 324
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.41 E-value=3e-13 Score=146.27 Aligned_cols=140 Identities=18% Similarity=0.210 Sum_probs=116.6
Q ss_pred ccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCc
Q 035917 85 FVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNND 156 (611)
Q Consensus 85 w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 156 (611)
|..|.|.+.. ...++.|+|++|++.+..|..+..+++|+.|+|++|.+++..|..+.. +++|+.|+|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~L~~n~ 134 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNG-LASLNTLELFDNW 134 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT-CTTCCEEECCSSC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccC-cccCCEEECCCCc
Confidence 5788886431 236889999999999999999999999999999999999877788887 9999999999999
Q ss_pred CcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCc-cCCC---CCcccCCCCC
Q 035917 157 LSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPS-SFKG---FDKADFDGNS 225 (611)
Q Consensus 157 l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~-~~~~---~~~~~~~~n~ 225 (611)
+++..|..+.++++|++|+|++|.+++..+..|.++++|+.|++++|+.-+.+|. .+.+ +..+.+.+|.
T Consensus 135 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~ 207 (452)
T 3zyi_A 135 LTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207 (452)
T ss_dssp CSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSC
T ss_pred CCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCc
Confidence 9977777799999999999999999977777899999999999999766666665 3444 4444555553
No 325
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.41 E-value=3.3e-13 Score=151.28 Aligned_cols=139 Identities=19% Similarity=0.135 Sum_probs=117.5
Q ss_pred ccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCc
Q 035917 85 FVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNND 156 (611)
Q Consensus 85 w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 156 (611)
+.-|.|.+.. ...++.|+|++|.+++..|..++.+++|++|+|++|.+++..|..+.. +++|++|+|++|+
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~Ls~n~ 92 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQS-QHRLDTLVLTANP 92 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTT-CTTCCEEECTTCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccC-ccccCeeeCCCCc
Confidence 3457785421 236889999999999999999999999999999999999888888888 9999999999999
Q ss_pred CcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCC-CCCccC--CCCCcccCCCC
Q 035917 157 LSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTG-TIPSSF--KGFDKADFDGN 224 (611)
Q Consensus 157 l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g-~ip~~~--~~~~~~~~~~n 224 (611)
+++..|..++++++|++|+|++|.+++..|..++++++|++|++++|++++ .+|..+ .++..+.+.+|
T Consensus 93 l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 163 (606)
T 3t6q_A 93 LIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNN 163 (606)
T ss_dssp CSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSS
T ss_pred ccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccC
Confidence 999999999999999999999999998777789999999999999999998 445443 33444455555
No 326
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.41 E-value=3.9e-13 Score=138.93 Aligned_cols=134 Identities=23% Similarity=0.303 Sum_probs=115.4
Q ss_pred CCCcccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEEC
Q 035917 81 FICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDL 152 (611)
Q Consensus 81 ~~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L 152 (611)
+.|.|..+.|.+.. ...++.|+|++|++++..+..++.+++|++|+|++|.+++..|..+.. +++|++|+|
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L 107 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP-LVKLERLYL 107 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTT-CTTCCEEEC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcC-CCCCCEEEC
Confidence 35789999996421 235788999999999988889999999999999999999877888988 999999999
Q ss_pred cCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccC--CCCCccCCCCCc
Q 035917 153 SNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLT--GTIPSSFKGFDK 218 (611)
Q Consensus 153 s~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~--g~ip~~~~~~~~ 218 (611)
++|.++ .+|..+. ++|++|+|++|.+++..|..+.++++|+.|++++|.++ |..|..+.+++.
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~ 172 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKK 172 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTT
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCC
Confidence 999998 7887765 79999999999999888888999999999999999996 366666655443
No 327
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.40 E-value=2.5e-13 Score=123.41 Aligned_cols=104 Identities=21% Similarity=0.222 Sum_probs=94.7
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcc-cCccCccCCcCcccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSG-PIPADLGNCTYLNTL 174 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G-~iP~~~~~l~~L~~L 174 (611)
..++.|+|++|.+.+. +.++.+++|+.|+|++|.+++.+|..+.. +++|++|+|++|.+++ +.|..++++++|++|
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~-l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L 118 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEK-CPNLTHLNLSGNKIKDLSTIEPLKKLENLKSL 118 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHH-CTTCCEEECTTSCCCSHHHHGGGGGCTTCCEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhh-CCCCCEEECCCCcCCChHHHHHHhhCCCCCEE
Confidence 3688999999999987 77999999999999999999889988887 9999999999999997 356889999999999
Q ss_pred cccccccCCCCC---hhhhcCCCcccccccc
Q 035917 175 ILSNNKLSGPIP---YQLSNLGRLKKFSVAN 202 (611)
Q Consensus 175 ~L~~N~l~g~iP---~~l~~l~~L~~L~l~~ 202 (611)
+|++|.+++..+ ..+..+++|+.|++++
T Consensus 119 ~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 119 DLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred eCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 999999998777 5799999999999874
No 328
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.40 E-value=4.2e-13 Score=128.14 Aligned_cols=108 Identities=19% Similarity=0.224 Sum_probs=96.4
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
..+..|+|++|.+++..|..++.+++|+.|+|++|.+++.+|..+.. +++|+.|+|++|.+.+.+| .+.++++|+.|+
T Consensus 88 ~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~-l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~ 165 (197)
T 4ezg_A 88 SNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINT-LPKVNSIDLSYNGAITDIM-PLKTLPELKSLN 165 (197)
T ss_dssp TTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTT-CSSCCEEECCSCTBCCCCG-GGGGCSSCCEEE
T ss_pred CCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhh-CCCCCEEEccCCCCccccH-hhcCCCCCCEEE
Confidence 36889999999999999999999999999999999999989999988 9999999999999666787 689999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTG 207 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g 207 (611)
|++|.+++ +| .+..+++|+.|++++|++.+
T Consensus 166 l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 166 IQFDGVHD-YR-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CTTBCCCC-CT-TGGGCSSCCEEEECBC----
T ss_pred CCCCCCcC-hH-HhccCCCCCEEEeeCcccCC
Confidence 99999996 55 68999999999999999875
No 329
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.40 E-value=2.9e-13 Score=150.30 Aligned_cols=131 Identities=19% Similarity=0.229 Sum_probs=91.7
Q ss_pred EEEEEecCCcccccCC-ccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCc-ccCccCccCCcCccccc
Q 035917 98 ILNLELREMKLSGKIP-EPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLS-GPIPADLGNCTYLNTLI 175 (611)
Q Consensus 98 v~~l~l~~~~l~g~~p-~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~-G~iP~~~~~l~~L~~L~ 175 (611)
++.|+|++|.+.+..| ..+..+++|+.|+|++|.+.+.+|..+.. +++|+.|+|++|.++ |.+|..+..+++|++|+
T Consensus 398 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 398 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG-LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp CCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTT-CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhc-CCcCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 4455666666665555 34667777777777777777777766666 777777777777776 56777777777788888
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCC---cccCCCCCCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFD---KADFDGNSDLCG 229 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~---~~~~~~n~~lc~ 229 (611)
|++|++++..|..+.++++|+.|++++|++++..|..+.+++ .+.+.+|+..|.
T Consensus 477 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 477 LSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 887777777777777777788888888877777666555443 344566655443
No 330
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.39 E-value=5.9e-13 Score=135.32 Aligned_cols=110 Identities=32% Similarity=0.347 Sum_probs=66.2
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
+++.|+|++|.+++..+. +.+++|+.|+|++|.|+ .+|..+.. +++|+.|+|++|++++..|..+.++++|++|+|
T Consensus 56 ~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~-l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 56 RLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQT-LPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTT-CTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCC-cCchhhcc-CCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 355555555555543221 45566666666666665 45655555 666666666666666555555666666666666
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
++|+|++..|..|..+++|+.|+|++|+|++..+
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 165 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPA 165 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCT
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCH
Confidence 6666665555556666666666666666664433
No 331
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.39 E-value=3.4e-13 Score=151.17 Aligned_cols=120 Identities=21% Similarity=0.202 Sum_probs=68.1
Q ss_pred cEEEEEecCCcccccCCcc-CcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCccc---CccCccCCcCcc
Q 035917 97 RILNLELREMKLSGKIPEP-LKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGP---IPADLGNCTYLN 172 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~-l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~---iP~~~~~l~~L~ 172 (611)
.++.|+|++|.+.+..|+. +..+++|+.|+|++|.+++.+|..+.. +++|+.|+|++|.+++. .+..+..+++|+
T Consensus 401 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 401 QLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDG-LPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTT-CTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred cCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhC-CCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 4555666666666555443 556666666666666666555555554 55666666666665542 223455555556
Q ss_pred cccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCC
Q 035917 173 TLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFD 217 (611)
Q Consensus 173 ~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~ 217 (611)
+|+|++|.+++..|..|.++++|+.|++++|++++.+|..+.++.
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~ 524 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLK 524 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCC
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccc
Confidence 666666555555555555555555555555555555555554443
No 332
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.38 E-value=6.9e-13 Score=147.28 Aligned_cols=120 Identities=21% Similarity=0.227 Sum_probs=86.6
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|++++..+..+..+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++..|..++++++|++|+|
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS-LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTT-CTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccC-chhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 5677788888877777777777888888888888777655555665 777777777777777766677777777777777
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCC-CCCccCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTG-TIPSSFKGFD 217 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g-~ip~~~~~~~ 217 (611)
++|++++..+..++++++|++|++++|.+++ .+|..+++++
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~ 149 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLT 149 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCT
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccC
Confidence 7777776555457777777777777777766 4676655443
No 333
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.38 E-value=2e-13 Score=140.18 Aligned_cols=114 Identities=19% Similarity=0.242 Sum_probs=49.9
Q ss_pred EEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCcc--CchhH--HhcCCCCCEEECcCCcCcc--cCccC-ccCCcC
Q 035917 98 ILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGN--IPAQI--CNWLPYLVLLDLSNNDLSG--PIPAD-LGNCTY 170 (611)
Q Consensus 98 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~--ip~~~--~~~l~~L~~L~Ls~N~l~G--~iP~~-~~~l~~ 170 (611)
++.|+|++|.+.+..|..++.+++|+.|+|++|.+.|. +|..+ .. +++|+.|+|++|.+++ .+|.. +.++++
T Consensus 151 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~ 229 (312)
T 1wwl_A 151 LKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLK-FPTLQVLALRNAGMETPSGVCSALAAARVQ 229 (312)
T ss_dssp CCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTS-CTTCCEEECTTSCCCCHHHHHHHHHHTTCC
T ss_pred CcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhcc-CCCCCEEECCCCcCcchHHHHHHHHhcCCC
Confidence 44444444444444444444444555555555544443 12222 22 4444444444444441 22211 233444
Q ss_pred cccccccccccCCCCC-hhhhcCCCcccccccccccCCCCCccC
Q 035917 171 LNTLILSNNKLSGPIP-YQLSNLGRLKKFSVANNDLTGTIPSSF 213 (611)
Q Consensus 171 L~~L~L~~N~l~g~iP-~~l~~l~~L~~L~l~~N~l~g~ip~~~ 213 (611)
|++|+|++|.+++.+| ..+..+++|+.|+|++|+++ .+|..+
T Consensus 230 L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~ 272 (312)
T 1wwl_A 230 LQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGL 272 (312)
T ss_dssp CSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSC
T ss_pred CCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhc
Confidence 4445555554444443 22333444445555555444 444433
No 334
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.38 E-value=3.7e-13 Score=142.53 Aligned_cols=127 Identities=17% Similarity=0.158 Sum_probs=101.1
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+++++.+....+..+..+++|++|+|++|.+++..|..+.. +++|+.|+|++|.+++..|..++++++|++|+|
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY-AHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccC-CCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 4567888888877655555788999999999999998766667777 899999999999999888888899999999999
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCCc---ccCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDK---ADFDGN 224 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~---~~~~~n 224 (611)
++|.++...+..|.++++|++|++++|.+++..|..+..++. +.+.+|
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n 175 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 175 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSS
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCC
Confidence 999998544444688999999999999998877776665544 344444
No 335
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.38 E-value=2.9e-13 Score=149.70 Aligned_cols=122 Identities=22% Similarity=0.231 Sum_probs=110.5
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcc-cCccCccCCcCcccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSG-PIPADLGNCTYLNTL 174 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G-~iP~~~~~l~~L~~L 174 (611)
..++.|+|++|++.+..|..++.+++|++|+|++|.+++..|..+.. +++|++|+|++|.+++ .+|..++++++|++|
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L 128 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGP-LSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTL 128 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTT-CTTCCEEECTTCCCSSSCSSCSCTTCTTCCEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhcc-CCCCcEEECCCCcccccchhhhhhccCCccEE
Confidence 36889999999999999999999999999999999999877777887 9999999999999997 578899999999999
Q ss_pred cccccccCCCCC-hhhhcCCCcccccccccccCCCCCccCCCCCc
Q 035917 175 ILSNNKLSGPIP-YQLSNLGRLKKFSVANNDLTGTIPSSFKGFDK 218 (611)
Q Consensus 175 ~L~~N~l~g~iP-~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~ 218 (611)
+|++|.+.+.+| ..+.++++|++|++++|.+++.+|..++.+..
T Consensus 129 ~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~ 173 (549)
T 2z81_A 129 RIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRD 173 (549)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSE
T ss_pred ECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhcccc
Confidence 999999777776 57999999999999999999999988766543
No 336
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.38 E-value=4.5e-13 Score=131.88 Aligned_cols=125 Identities=19% Similarity=0.240 Sum_probs=106.1
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCC-CCccCch-hHHhcCCCCCEEECcC-CcCcccCccCccCCcCcc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSAND-LSGNIPA-QICNWLPYLVLLDLSN-NDLSGPIPADLGNCTYLN 172 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~-l~g~ip~-~~~~~l~~L~~L~Ls~-N~l~G~iP~~~~~l~~L~ 172 (611)
..++.|+|++|++.+..+..+..+++|+.|+|++|. ++ .||+ .+.. +++|+.|+|++ |++++..|..+.++++|+
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~-~i~~~~f~~-l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~ 108 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ-QLESHSFYN-LSKVTHIEIRNTRNLTYIDPDALKELPLLK 108 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC-EECTTTEES-CTTCCEEEEEEETTCCEECTTSEECCTTCC
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc-eeCHhHcCC-CcCCcEEECCCCCCeeEcCHHHhCCCCCCC
Confidence 368899999999999888899999999999999997 77 4554 5666 99999999999 999977777899999999
Q ss_pred cccccccccCCCCChhhhcCCCcc---ccccccc-ccCCCCCccCCCCC----cccCCCC
Q 035917 173 TLILSNNKLSGPIPYQLSNLGRLK---KFSVANN-DLTGTIPSSFKGFD----KADFDGN 224 (611)
Q Consensus 173 ~L~L~~N~l~g~iP~~l~~l~~L~---~L~l~~N-~l~g~ip~~~~~~~----~~~~~~n 224 (611)
+|+|++|.+++ +|. +..+++|+ .|++++| .+++..+..|.++. .+.+.+|
T Consensus 109 ~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n 166 (239)
T 2xwt_C 109 FLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNN 166 (239)
T ss_dssp EEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSC
T ss_pred EEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCC
Confidence 99999999997 887 88888888 9999999 89876666676655 4445555
No 337
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.37 E-value=1.3e-12 Score=143.74 Aligned_cols=125 Identities=22% Similarity=0.267 Sum_probs=99.7
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCc--cCchhHHhcCCCCCEEECcCCcCcccCccC-ccCCcCcc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSG--NIPAQICNWLPYLVLLDLSNNDLSGPIPAD-LGNCTYLN 172 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~-~~~l~~L~ 172 (611)
..++.|+|++|.+++.+|..++.+++|+.|+|++|++++ .+|..+.. +++|+.|+|++|.+++.+|.. +..+++|+
T Consensus 324 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~-l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 324 SPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQ-MKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTT-CTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhh-CCCCCEEECCCCcCCcccccchhccCccCC
Confidence 468899999999999999999999999999999999997 67778887 899999999999999878875 67778888
Q ss_pred cccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC---CcccCCCC
Q 035917 173 TLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF---DKADFDGN 224 (611)
Q Consensus 173 ~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~---~~~~~~~n 224 (611)
.|+|++|.+++.+|..+. ++|+.|++++|+++ .+|..+..+ ..+.+.+|
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N 454 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASN 454 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSS
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCC
Confidence 888888888877776554 57777777777777 667654433 33444555
No 338
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.37 E-value=1.9e-13 Score=150.39 Aligned_cols=116 Identities=21% Similarity=0.172 Sum_probs=88.2
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
+++.|+|++|.+.+..|..+..+++|++|+|++|++++..|..+.. +++|++|||++|+++ .||.. .+++|++|+|
T Consensus 22 ~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 97 (520)
T 2z7x_B 22 KTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKF-NQELEYLDLSHNKLV-KISCH--PTVNLKHLDL 97 (520)
T ss_dssp TCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTT-CTTCCEEECCSSCCC-EEECC--CCCCCSEEEC
T ss_pred cccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhc-ccCCCEEecCCCcee-ecCcc--ccCCccEEec
Confidence 5778888888888777777888888888888888888766777776 788888888888887 57766 7788888888
Q ss_pred cccccCC-CCChhhhcCCCcccccccccccCCCCCccCCCC
Q 035917 177 SNNKLSG-PIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF 216 (611)
Q Consensus 177 ~~N~l~g-~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~ 216 (611)
++|.+++ .+|..++++++|++|++++|.+++.....+.++
T Consensus 98 ~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L 138 (520)
T 2z7x_B 98 SFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHL 138 (520)
T ss_dssp CSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTS
T ss_pred cCCccccccchhhhccCCcceEEEecCcccchhhccccccc
Confidence 8888876 577788888888888888887776433333333
No 339
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.37 E-value=1.1e-12 Score=141.34 Aligned_cols=139 Identities=19% Similarity=0.238 Sum_probs=115.3
Q ss_pred ccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCc
Q 035917 85 FVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNND 156 (611)
Q Consensus 85 w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~ 156 (611)
|..|.|.+.. ...++.|+|++|++.+..+..+..+++|+.|+|++|.+++..|..+.. +++|+.|+|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~-l~~L~~L~L~~n~ 123 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNG-LANLNTLELFDNR 123 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTT-CSSCCEEECCSSC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccC-CccCCEEECCCCc
Confidence 6789996421 235778999999999999999999999999999999999766677777 9999999999999
Q ss_pred CcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCc-cCCC---CCcccCCCC
Q 035917 157 LSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPS-SFKG---FDKADFDGN 224 (611)
Q Consensus 157 l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~-~~~~---~~~~~~~~n 224 (611)
+++..+..+.++++|++|+|++|.+++..+..|.++++|+.|++++|+..+.+|. .|.+ +..+.+.+|
T Consensus 124 l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n 195 (440)
T 3zyj_A 124 LTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMC 195 (440)
T ss_dssp CSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTS
T ss_pred CCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCC
Confidence 9966666799999999999999999977777899999999999999776666665 3444 444455555
No 340
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.36 E-value=6.5e-13 Score=147.70 Aligned_cols=125 Identities=21% Similarity=0.137 Sum_probs=105.6
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
..++.|+|++|.+.+..|..++.+++|++|+|++|.+++..|..+.. +++|++|||++|+++ .+|.. .+++|++|+
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~ 127 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLF-NQDLEYLDVSHNRLQ-NISCC--PMASLRHLD 127 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTT-CTTCCEEECTTSCCC-EECSC--CCTTCSEEE
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCC-CCCCCEEECCCCcCC-ccCcc--ccccCCEEE
Confidence 46889999999999888889999999999999999999877888887 999999999999998 78877 899999999
Q ss_pred ccccccCC-CCChhhhcCCCcccccccccccCCCCCccCCCC--CcccCCCC
Q 035917 176 LSNNKLSG-PIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF--DKADFDGN 224 (611)
Q Consensus 176 L~~N~l~g-~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~--~~~~~~~n 224 (611)
|++|++++ ++|..|+++++|++|++++|++++.....+.++ ..+.+.+|
T Consensus 128 Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n 179 (562)
T 3a79_B 128 LSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLV 179 (562)
T ss_dssp CCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEES
T ss_pred CCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecc
Confidence 99999987 678899999999999999999987544444444 44444444
No 341
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.35 E-value=1.3e-12 Score=138.22 Aligned_cols=126 Identities=25% Similarity=0.306 Sum_probs=110.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccC-ccCCcCccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPAD-LGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~-~~~l~~L~~L~ 175 (611)
.++.|+|++|.+.+..+..++.+++|+.|+|++|.+++..|..+.. +++|++|+|++|.++ .+|.. ++++++|++|+
T Consensus 70 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 70 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQN-VPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEE
T ss_pred cCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcC-CCCCCEEECCCCccC-cCCHHHhcCCCCCcEEE
Confidence 5778999999999988889999999999999999999877777777 999999999999999 56655 68999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCCcccCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDKADFDGN 224 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~n 224 (611)
|++|.+++..|..+..+++|+.|++++|++++.-...+.++..+.+.+|
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccc
Confidence 9999999888888999999999999999999865566666666666555
No 342
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.35 E-value=1.3e-12 Score=140.87 Aligned_cols=129 Identities=26% Similarity=0.315 Sum_probs=78.9
Q ss_pred EEEEEecCCcccccCCc-cCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 98 ILNLELREMKLSGKIPE-PLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 98 v~~l~l~~~~l~g~~p~-~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
+..|+|++++.-+.+++ .+..+++|+.|+|++|+++ .+|. +.. +++|+.|+|++|.+++..|..+.++++|+.|+|
T Consensus 162 L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~-~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 238 (440)
T 3zyj_A 162 LRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN-LTP-LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWM 238 (440)
T ss_dssp CCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-CTT-CSSCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-cCC-CcccCEEECCCCccCccChhhhccCccCCEEEC
Confidence 34444444332222332 3555666666666666665 4553 444 666777777777777666777777777777777
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCC---CCcccCCCCCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG---FDKADFDGNSDLCG 229 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~---~~~~~~~~n~~lc~ 229 (611)
++|++++..|..|.++++|+.|+|++|+|++..+..+.. +..+.+.+|+..|.
T Consensus 239 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 294 (440)
T 3zyj_A 239 IQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCN 294 (440)
T ss_dssp TTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECS
T ss_pred CCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCC
Confidence 777777766777777777777777777777655554443 34445666666554
No 343
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.35 E-value=6.9e-13 Score=147.49 Aligned_cols=107 Identities=21% Similarity=0.177 Sum_probs=53.8
Q ss_pred cCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcc--cCccCccCCcCcccccccccccCCCCChh-hhcCC
Q 035917 117 KFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSG--PIPADLGNCTYLNTLILSNNKLSGPIPYQ-LSNLG 193 (611)
Q Consensus 117 ~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G--~iP~~~~~l~~L~~L~L~~N~l~g~iP~~-l~~l~ 193 (611)
..+++|+.|+|++|.+++.+|..+.. +++|+.|+|++|++++ .+|..++++++|+.|+|++|.+++.+|.. +..++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~ 428 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCST-LKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAE 428 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCS-CSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCT
T ss_pred cCCCCceEEECCCCccccchhhhhcc-cCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcc
Confidence 34455555555555555555555544 5555555555555554 33344555555555555555555544432 44455
Q ss_pred CcccccccccccCCCCCccC-CCCCcccCCCC
Q 035917 194 RLKKFSVANNDLTGTIPSSF-KGFDKADFDGN 224 (611)
Q Consensus 194 ~L~~L~l~~N~l~g~ip~~~-~~~~~~~~~~n 224 (611)
+|+.|++++|+++|.+|..+ .++..+.+.+|
T Consensus 429 ~L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N 460 (562)
T 3a79_B 429 SILVLNLSSNMLTGSVFRCLPPKVKVLDLHNN 460 (562)
T ss_dssp TCCEEECCSSCCCGGGGSSCCTTCSEEECCSS
T ss_pred cCCEEECCCCCCCcchhhhhcCcCCEEECCCC
Confidence 55555555555555555444 23333333333
No 344
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.33 E-value=1.8e-12 Score=120.83 Aligned_cols=104 Identities=22% Similarity=0.234 Sum_probs=89.5
Q ss_pred CCcccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECc
Q 035917 82 ICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLS 153 (611)
Q Consensus 82 ~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls 153 (611)
.|+|..+.|.+.. ...++.|+|++|++++..|..+..+++|+.|+|++|+|++..|..+.. +++|++|+|+
T Consensus 8 ~C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~-l~~L~~L~L~ 86 (170)
T 3g39_A 8 SCSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDK-LTQLTQLSLN 86 (170)
T ss_dssp EEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTT-CTTCCEEECC
T ss_pred CcCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccC-CCCCCEEECC
Confidence 4789999996432 235778999999999999999999999999999999999544444556 9999999999
Q ss_pred CCcCcccCccCccCCcCcccccccccccCCCCC
Q 035917 154 NNDLSGPIPADLGNCTYLNTLILSNNKLSGPIP 186 (611)
Q Consensus 154 ~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP 186 (611)
+|+|++..|..+.++++|++|+|++|.|++..+
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 87 DNQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CCccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 999998777779999999999999999997755
No 345
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.32 E-value=1e-12 Score=142.97 Aligned_cols=115 Identities=23% Similarity=0.271 Sum_probs=79.2
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCch-hHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPA-QICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~-~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.++.|+|++|.+++..|..+..|++|+.|+|++|.+++ +|. .+.. +++|+.|+|++|.+++.+|..+.++++|+.|+
T Consensus 57 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~-l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 134 (477)
T 2id5_A 57 HLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL-IPLGVFTG-LSNLTKLDISENKIVILLDYMFQDLYNLKSLE 134 (477)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCTTSSTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCc-cCcccccC-CCCCCEEECCCCccccCChhHccccccCCEEE
Confidence 46677777777777777777777777777777777763 443 3444 67777777777777777676777777777777
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSF 213 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~ 213 (611)
|++|.+++..|..|.++++|+.|++++|.+++..+..+
T Consensus 135 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 172 (477)
T 2id5_A 135 VGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL 172 (477)
T ss_dssp ECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHH
T ss_pred CCCCccceeChhhccCCCCCCEEECCCCcCcccChhHh
Confidence 77777776666667777777777777777765544433
No 346
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.32 E-value=5.2e-13 Score=136.93 Aligned_cols=108 Identities=17% Similarity=0.199 Sum_probs=62.4
Q ss_pred EEEEEecCCcccccCCccC--cCCCCCCEEEccCCCCCccCc----hhHHhcCCCCCEEECcCCcCcccCccCccCCcCc
Q 035917 98 ILNLELREMKLSGKIPEPL--KFCKSMQRLDLSANDLSGNIP----AQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYL 171 (611)
Q Consensus 98 v~~l~l~~~~l~g~~p~~l--~~l~~L~~L~Ls~N~l~g~ip----~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L 171 (611)
++.|+|++|.+.|.+|..+ +.+++|+.|+|++|.+++.+| ..+.. +++|+.|+|++|.+++..|..++++++|
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~-~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL-KPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB-CSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh-ccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 5566666666666666665 666666666666666665544 22232 5666666666666665555566666666
Q ss_pred ccccccccccCCC--CC--hhhhcCCCcccccccccccC
Q 035917 172 NTLILSNNKLSGP--IP--YQLSNLGRLKKFSVANNDLT 206 (611)
Q Consensus 172 ~~L~L~~N~l~g~--iP--~~l~~l~~L~~L~l~~N~l~ 206 (611)
++|+|++|++.|. +| ..++.+++|++|+|++|+++
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 210 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME 210 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC
Confidence 6666666665542 11 12245555555555555554
No 347
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.32 E-value=2.1e-12 Score=139.56 Aligned_cols=111 Identities=19% Similarity=0.253 Sum_probs=63.2
Q ss_pred CcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCc
Q 035917 116 LKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRL 195 (611)
Q Consensus 116 l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L 195 (611)
+..+++|+.|+|++|++++ +| .+.. +++|+.|+|++|.+++..|..+.++++|+.|+|++|++++..|..|.++++|
T Consensus 192 ~~~l~~L~~L~L~~n~l~~-~~-~~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 268 (452)
T 3zyi_A 192 FEGLFNLKYLNLGMCNIKD-MP-NLTP-LVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASL 268 (452)
T ss_dssp TTTCTTCCEEECTTSCCSS-CC-CCTT-CTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred ccCCCCCCEEECCCCcccc-cc-cccc-cccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCC
Confidence 4445555555555555552 33 2333 5566666666666666666666666666666666666666666666666666
Q ss_pred ccccccccccCCCCCccCCC---CCcccCCCCCCCCC
Q 035917 196 KKFSVANNDLTGTIPSSFKG---FDKADFDGNSDLCG 229 (611)
Q Consensus 196 ~~L~l~~N~l~g~ip~~~~~---~~~~~~~~n~~lc~ 229 (611)
+.|+|++|+|++..+..+.. +..+.+.+|+..|.
T Consensus 269 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~Cd 305 (452)
T 3zyi_A 269 VELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCD 305 (452)
T ss_dssp CEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECS
T ss_pred CEEECCCCcCCccChHHhccccCCCEEEccCCCcCCC
Confidence 66666666666554444333 33344555655443
No 348
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.32 E-value=2e-12 Score=133.03 Aligned_cols=140 Identities=24% Similarity=0.176 Sum_probs=110.9
Q ss_pred CcccceecCCCCCCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCc
Q 035917 83 CQFVGVSCWNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIP 162 (611)
Q Consensus 83 c~w~Gv~C~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP 162 (611)
|...++.+.. ...+..|+|++|.+++..+..++.+++|+.|+|++|.+++..|..+...+++|++|+|++|.+++. |
T Consensus 109 n~l~~~~~~~--~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~ 185 (317)
T 3o53_A 109 NNISRVSCSR--GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-K 185 (317)
T ss_dssp SCCSEEEECC--CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-E
T ss_pred CccCCcCccc--cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-c
Confidence 4444555532 235889999999999988888999999999999999999877777754489999999999999865 4
Q ss_pred cCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC---CcccCCCCCCCC
Q 035917 163 ADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF---DKADFDGNSDLC 228 (611)
Q Consensus 163 ~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~---~~~~~~~n~~lc 228 (611)
. ...+++|++|+|++|++++ +|..+..+++|+.|++++|+++ .+|..+..+ ..+.+.+|+..|
T Consensus 186 ~-~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 186 G-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp C-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBH
T ss_pred c-ccccccCCEEECCCCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccC
Confidence 3 3458999999999999996 4555999999999999999999 578766544 445566666443
No 349
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.32 E-value=1.3e-12 Score=136.33 Aligned_cols=121 Identities=21% Similarity=0.255 Sum_probs=107.0
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchh-HHhcCCCCCEEECcCCcCcccCcc--CccCCcCcc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQ-ICNWLPYLVLLDLSNNDLSGPIPA--DLGNCTYLN 172 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~-~~~~l~~L~~L~Ls~N~l~G~iP~--~~~~l~~L~ 172 (611)
..++.|+|++|++++..|..++.+++|++|+|++|.+++ +|.. +.. +++|++|+|++|.++ .+|. .+.++++|+
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~-l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~ 152 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSN-LSSSWFKP-LSSLTFLNLLGNPYK-TLGETSLFSHLTKLQ 152 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSS-CCHHHHTT-CTTCSEEECTTCCCS-SSCSSCSCTTCTTCC
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCc-CCHhHhCC-CccCCEEECCCCCCc-ccCchhhhccCCCCc
Confidence 368899999999999989999999999999999999995 6655 666 999999999999999 5665 789999999
Q ss_pred cccccccc-cCCCCChhhhcCCCcccccccccccCCCCCccCCCCCcc
Q 035917 173 TLILSNNK-LSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDKA 219 (611)
Q Consensus 173 ~L~L~~N~-l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~ 219 (611)
+|+|++|+ +++..|..+.++++|+.|++++|.+++..|..+.+++.+
T Consensus 153 ~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 200 (353)
T 2z80_A 153 ILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNV 200 (353)
T ss_dssp EEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEE
T ss_pred EEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccC
Confidence 99999995 676667889999999999999999999989888776544
No 350
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.31 E-value=3.4e-12 Score=131.90 Aligned_cols=114 Identities=24% Similarity=0.329 Sum_probs=69.5
Q ss_pred cEEEEEecCCccc--ccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccc
Q 035917 97 RILNLELREMKLS--GKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTL 174 (611)
Q Consensus 97 ~v~~l~l~~~~l~--g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L 174 (611)
.+..|+|++|.+. |..+..+..+++|+.|+|++|.++ .+|..+ .++|+.|+|++|.+++..|..+.++++|+.|
T Consensus 146 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~---~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 221 (330)
T 1xku_A 146 QMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGL---PPSLTELHLDGNKITKVDAASLKGLNNLAKL 221 (330)
T ss_dssp TCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSC---CTTCSEEECTTSCCCEECTGGGTTCTTCCEE
T ss_pred cccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCccc---cccCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 4667777777764 355666666666666666666666 355433 2556666666666665555566666666666
Q ss_pred cccccccCCCCChhhhcCCCcccccccccccCCCCCccCCC
Q 035917 175 ILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG 215 (611)
Q Consensus 175 ~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~ 215 (611)
+|++|.+++..|..+..+++|+.|++++|+++ .+|..+..
T Consensus 222 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 261 (330)
T 1xku_A 222 GLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLAD 261 (330)
T ss_dssp ECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTT
T ss_pred ECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhcc
Confidence 66666666555555666666666666666665 55554443
No 351
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.31 E-value=5.3e-13 Score=145.78 Aligned_cols=31 Identities=23% Similarity=0.156 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHhccCCCCccceeeEEEeCC
Q 035917 362 GEKKFRNEMNRLGQLRHPNLAPLLGYCVVEE 392 (611)
Q Consensus 362 ~~~~~~~Ev~~l~~l~H~nIv~l~g~~~~~~ 392 (611)
+.++|..|++.+++++|+|+|+++|||....
T Consensus 322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 322 GSETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred cHHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 3568999999999999999999999997643
No 352
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.31 E-value=2.4e-12 Score=146.31 Aligned_cols=133 Identities=22% Similarity=0.243 Sum_probs=98.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCcc----Cc----hhHHhcCCCCCEEECcCCcCcccCcc-CccC
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGN----IP----AQICNWLPYLVLLDLSNNDLSGPIPA-DLGN 167 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~----ip----~~~~~~l~~L~~L~Ls~N~l~G~iP~-~~~~ 167 (611)
.++.|+|++|++++..+..+..+++|+.|+|++|.+++. +| ..+.. +++|+.|+|++|+++ .||. .+.+
T Consensus 481 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~-l~~L~~L~L~~N~l~-~i~~~~~~~ 558 (680)
T 1ziw_A 481 NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKG-LSHLHILNLESNGFD-EIPVEVFKD 558 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTT-CTTCCEEECCSSCCC-CCCTTTTTT
T ss_pred CCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcC-CCCCCEEECCCCCCC-CCCHHHccc
Confidence 466777777777766666677777778888887777743 11 12444 778888888888887 5554 4788
Q ss_pred CcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCcc----CCCCCcccCCCCCCCCCCC
Q 035917 168 CTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSS----FKGFDKADFDGNSDLCGGP 231 (611)
Q Consensus 168 l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~----~~~~~~~~~~~n~~lc~~~ 231 (611)
+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|.. +.++..+.+.+|+..|..+
T Consensus 559 l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 559 LFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred ccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 888888888888888666666788888888888888888877763 4566677788888888643
No 353
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.31 E-value=1.1e-12 Score=122.78 Aligned_cols=108 Identities=25% Similarity=0.222 Sum_probs=78.8
Q ss_pred cEEEEEecCCcccccCCccCcCCC-CCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCK-SMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~-~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.++.|+|++|++.. +|. +..+. +|+.|+|++|.+++. ..+.. +++|++|+|++|.+++..|..++.+++|++|+
T Consensus 20 ~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 20 RDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPL-LRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp SCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCC-CSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--ccccc-CCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 57788888888874 443 44444 888888888888853 45555 78888888888888854333347888888888
Q ss_pred ccccccCCCCCh--hhhcCCCcccccccccccCCCCCc
Q 035917 176 LSNNKLSGPIPY--QLSNLGRLKKFSVANNDLTGTIPS 211 (611)
Q Consensus 176 L~~N~l~g~iP~--~l~~l~~L~~L~l~~N~l~g~ip~ 211 (611)
|++|.++ .+|. .+..+++|+.|++++|.++ .+|.
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~ 130 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKH 130 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTT
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHh
Confidence 8888884 5665 6778888888888888887 4454
No 354
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.30 E-value=4.7e-12 Score=118.51 Aligned_cols=104 Identities=20% Similarity=0.243 Sum_probs=88.5
Q ss_pred CCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCccccccc
Q 035917 122 MQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVA 201 (611)
Q Consensus 122 L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~ 201 (611)
-+.+++++|.|+ .||..+ .++|+.|+|++|+|++.+|..++++++|++|+|++|+|++..|..|.++++|+.|+|+
T Consensus 14 ~~~l~~~~n~l~-~iP~~~---~~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~ 89 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGI---PTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLN 89 (174)
T ss_dssp SSEEECCSSCCS-SCCSCC---CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CcEEEeCCCCCC-ccCCCc---CCCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECC
Confidence 378999999996 799866 4789999999999999999999999999999999999998766678999999999999
Q ss_pred ccccCCCCCccCCCC---CcccCCCCCCCCC
Q 035917 202 NNDLTGTIPSSFKGF---DKADFDGNSDLCG 229 (611)
Q Consensus 202 ~N~l~g~ip~~~~~~---~~~~~~~n~~lc~ 229 (611)
+|+|++..|..+..+ ..+.+.+|+..|.
T Consensus 90 ~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 90 DNHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SSCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CCccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 999997666556554 4456777765553
No 355
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.27 E-value=4.7e-12 Score=118.52 Aligned_cols=104 Identities=15% Similarity=0.231 Sum_probs=92.4
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhH-HhcCCCCCEEECcCCcCcccCcc--CccCCcCccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQI-CNWLPYLVLLDLSNNDLSGPIPA--DLGNCTYLNT 173 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~-~~~l~~L~~L~Ls~N~l~G~iP~--~~~~l~~L~~ 173 (611)
.+..|+|++|.+++. +.++.+++|+.|+|++|.+++ +|+.+ .. +++|++|+|++|.++ .+|. .+..+++|+.
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~-l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~ 117 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGEGLDQA-LPDLTELILTNNSLV-ELGDLDPLASLKSLTY 117 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECSCHHHH-CTTCCEEECCSCCCC-CGGGGGGGGGCTTCCE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCcchhhc-CCCCCEEECCCCcCC-cchhhHhhhcCCCCCE
Confidence 688999999999986 679999999999999999995 56554 66 999999999999995 6787 7899999999
Q ss_pred ccccccccCCCCChh----hhcCCCcccccccccccC
Q 035917 174 LILSNNKLSGPIPYQ----LSNLGRLKKFSVANNDLT 206 (611)
Q Consensus 174 L~L~~N~l~g~iP~~----l~~l~~L~~L~l~~N~l~ 206 (611)
|+|++|.++ .+|.. +..+++|+.||++.|...
T Consensus 118 L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 118 LCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999998 56764 899999999999999764
No 356
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.26 E-value=3.7e-14 Score=135.66 Aligned_cols=104 Identities=25% Similarity=0.387 Sum_probs=60.6
Q ss_pred EEEEEecCCcccccCCc------cCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCc
Q 035917 98 ILNLELREMKLSGKIPE------PLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYL 171 (611)
Q Consensus 98 v~~l~l~~~~l~g~~p~------~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L 171 (611)
|+.++|+.+.++|.+|+ .++.+++|+.|+|++|.+++ +| .+.. +++|+.|+|++|.++ .+|..+..+++|
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~-l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSG-MENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHH-HTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-cccc-CCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 44445555555555554 55566666666666666654 55 5554 566666666666665 455555555666
Q ss_pred ccccccccccCCCCChhhhcCCCcccccccccccCC
Q 035917 172 NTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTG 207 (611)
Q Consensus 172 ~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g 207 (611)
++|+|++|++++ +| .+..+++|+.|++++|++++
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~ 129 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN 129 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc
Confidence 666666666664 34 45556666666666666654
No 357
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.23 E-value=5.9e-12 Score=123.81 Aligned_cols=125 Identities=20% Similarity=0.219 Sum_probs=88.4
Q ss_pred cEEEEEecC-CcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCC---EEECcCC-cCcccCccCccCCcCc
Q 035917 97 RILNLELRE-MKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLV---LLDLSNN-DLSGPIPADLGNCTYL 171 (611)
Q Consensus 97 ~v~~l~l~~-~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~---~L~Ls~N-~l~G~iP~~~~~l~~L 171 (611)
.+..|+|++ |.+++..+..+..+++|+.|+|++|.+++ +|. +.. +++|+ .|+|++| .+++..|..+.++++|
T Consensus 81 ~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~-l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L 157 (239)
T 2xwt_C 81 KVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTK-VYSTDIFFILEITDNPYMTSIPVNAFQGLCNE 157 (239)
T ss_dssp TCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTT-CCBCCSEEEEEEESCTTCCEECTTTTTTTBSS
T ss_pred CCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccc-ccccccccEEECCCCcchhhcCcccccchhcc
Confidence 577788887 88887666777888888888888888875 776 555 77777 8888888 7776555667778888
Q ss_pred c-cccccccccCCCCChhhhcCCCcccccccccc-cCCCCCccCCCC----CcccCCCCC
Q 035917 172 N-TLILSNNKLSGPIPYQLSNLGRLKKFSVANND-LTGTIPSSFKGF----DKADFDGNS 225 (611)
Q Consensus 172 ~-~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~-l~g~ip~~~~~~----~~~~~~~n~ 225 (611)
+ .|+|++|+++ .+|......++|+.|++++|+ +++..|..+.++ ..+.+.+|.
T Consensus 158 ~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~ 216 (239)
T 2xwt_C 158 TLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTS 216 (239)
T ss_dssp EEEEECCSCCCC-EECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCC
T ss_pred eeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCc
Confidence 8 8888888887 666554444778888888884 775445555443 334455543
No 358
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.22 E-value=2.1e-11 Score=121.58 Aligned_cols=144 Identities=12% Similarity=0.021 Sum_probs=111.5
Q ss_pred HhhhcCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccc-hhHHHHHHHHHHHhccC-CCCccceeeEEEeCCeeEEEE
Q 035917 321 AASNSFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLR-HPNLAPLLGYCVVEEEKLLIY 398 (611)
Q Consensus 321 ~~t~~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~-H~nIv~l~g~~~~~~~~~lv~ 398 (611)
....+|.....++.|+.+.||++... ++.+++|+..... .....+.+|+++++.+. |..+.++++++...+..++||
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34456766677788888999999854 6899999986422 22346889999999985 677889999999888999999
Q ss_pred eccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhc---------------------------------------
Q 035917 399 KYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHG--------------------------------------- 439 (611)
Q Consensus 399 ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~--------------------------------------- 439 (611)
||++|.+|.+.+.. ......++.+++++|..||.-
T Consensus 90 e~i~G~~l~~~~~~------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (263)
T 3tm0_A 90 SEADGVLCSEEYED------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTP 163 (263)
T ss_dssp ECCSSEEHHHHCCT------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCS
T ss_pred EecCCeehhhccCC------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccccc
Confidence 99999999876421 112346788999999999961
Q ss_pred -----------------CCCCeeecCCCCCeEEeCCCCCeEEeeccccc
Q 035917 440 -----------------CQPPFLHQNICSNVILVDEDFDARIMDFGLAK 471 (611)
Q Consensus 440 -----------------~~~~ivHrDlkp~NILld~~~~~kl~DFGla~ 471 (611)
....++|+|++|.||+++++..+.|.||+.+.
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 164 FKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred CCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876566799998764
No 359
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=1e-11 Score=129.22 Aligned_cols=104 Identities=19% Similarity=0.212 Sum_probs=89.8
Q ss_pred CEEEccCC-CCCccCchhHHhcCCCCCEEECcC-CcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccc
Q 035917 123 QRLDLSAN-DLSGNIPAQICNWLPYLVLLDLSN-NDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSV 200 (611)
Q Consensus 123 ~~L~Ls~N-~l~g~ip~~~~~~l~~L~~L~Ls~-N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l 200 (611)
..+++++| +|+ .||. +.. +++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|+|..|..|.+|++|+.|+|
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~-~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 87 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPG-AENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNL 87 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCS-CSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEEC
T ss_pred CEEEcCCCCCCC-ccCC-CCC-CCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeC
Confidence 35799998 898 5998 887 99999999996 9999888889999999999999999999999999999999999999
Q ss_pred cccccCCCCCccCCC--CCcccCCCCCCCCC
Q 035917 201 ANNDLTGTIPSSFKG--FDKADFDGNSDLCG 229 (611)
Q Consensus 201 ~~N~l~g~ip~~~~~--~~~~~~~~n~~lc~ 229 (611)
++|+|++..|..+.. +..+.+.+|...|.
T Consensus 88 ~~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 88 SFNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp CSSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CCCccceeCHHHcccCCceEEEeeCCCccCC
Confidence 999999766665554 45566677766553
No 360
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.21 E-value=1.1e-11 Score=128.30 Aligned_cols=126 Identities=25% Similarity=0.319 Sum_probs=106.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
++..|+|++|.+++ +|..+. ++|+.|+|++|.+++..|..+.. +++|+.|+|++|.+++..|..++.+++|+.|+|
T Consensus 173 ~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 248 (332)
T 2ft3_A 173 KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLR-YSKLYRLGLGHNQIRMIENGSLSFLPTLRELHL 248 (332)
T ss_dssp CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTT-CTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEEC
T ss_pred ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcC-CCCCCEEECCCCcCCcCChhHhhCCCCCCEEEC
Confidence 57788999999887 666554 78999999999999877778887 899999999999999888888999999999999
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCC---------CCcccCCCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKG---------FDKADFDGNSDL 227 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~---------~~~~~~~~n~~l 227 (611)
++|+++ .+|..+..+++|+.|++++|++++..+..+.. +..+.+.+|+..
T Consensus 249 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp CSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred CCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 999999 89988999999999999999999766655543 344567777755
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.21 E-value=2.3e-11 Score=123.64 Aligned_cols=117 Identities=28% Similarity=0.398 Sum_probs=91.5
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|.+++..+ +..+++|+.|+|++|.+++ +|. +.. +++|+.|+|++|++++ + +.+.++++|+.|+|
T Consensus 69 ~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~~-l~~-l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 69 NVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LSS-LKD-LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GGG-GTT-CTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Chh-hcc-CCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 67889999998887544 8889999999999999885 443 666 8899999999999886 3 46788889999999
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCC---cccCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFD---KADFDGN 224 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~---~~~~~~n 224 (611)
++|++++. ..+..+++|+.|++++|++++..| +..++ .+.+.+|
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N 188 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 188 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCC
Confidence 99998865 468888999999999999887655 44433 3444444
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.21 E-value=1.2e-11 Score=137.40 Aligned_cols=100 Identities=27% Similarity=0.319 Sum_probs=91.2
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccC-ccCccCCcCccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPI-PADLGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~i-P~~~~~l~~L~~L~ 175 (611)
.++.|+|++|.|+ .+|..++.|++|+.|+|++|.|++ || .++. +++|+.|+|++|+|++.+ |..++++++|+.|+
T Consensus 464 ~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~-l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 464 LVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVAN-LPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTT-CSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred cCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCC-CCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 6889999999999 899999999999999999999997 88 7887 999999999999999987 99999999999999
Q ss_pred ccccccCCCCChh---hhcCCCcccccc
Q 035917 176 LSNNKLSGPIPYQ---LSNLGRLKKFSV 200 (611)
Q Consensus 176 L~~N~l~g~iP~~---l~~l~~L~~L~l 200 (611)
|++|.|++.+|.. +..+++|+.|++
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 9999999887742 345889998864
No 363
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.20 E-value=1.9e-11 Score=126.88 Aligned_cols=121 Identities=27% Similarity=0.420 Sum_probs=71.8
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+|++|.+++..+ +..+++|+.|+|++|.+++ ++ .+.. +++|+.|+|++|.+++. | .+..+++|+.|+|
T Consensus 222 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~-l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~L 294 (347)
T 4fmz_A 222 RLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-IN-AVKD-LTKLKMLNVGSNQISDI-S-VLNNLSQLNSLFL 294 (347)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTT-CTTCCEEECCSSCCCCC-G-GGGGCTTCSEEEC
T ss_pred cCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-Ch-hHhc-CCCcCEEEccCCccCCC-h-hhcCCCCCCEEEC
Confidence 45566666666654332 5666666666666666664 32 3444 66666666666666643 3 4566666666666
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCC-ccCCCCCcccCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP-SSFKGFDKADFDGN 224 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip-~~~~~~~~~~~~~n 224 (611)
++|.+++..|..+..+++|+.|++++|++++..| ..+.++..+.+.+|
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~N 343 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQ 343 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGGGGGCTTCSEESSSCC
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccccccChhhhhccceeehhhh
Confidence 6666666666666666666666666666666555 22333444444444
No 364
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.20 E-value=2.5e-11 Score=131.43 Aligned_cols=118 Identities=21% Similarity=0.207 Sum_probs=70.3
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+|++|++++ +| ++.+++|+.|+|++|++++. + +.. +++|+.|+|++|+++| +| ++.+++|+.|+|
T Consensus 171 ~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l~~-l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l 240 (457)
T 3bz5_A 171 QLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--LNQ-NIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDC 240 (457)
T ss_dssp TCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--CTT-CTTCSEEECCSSCCSC-CC--CTTCTTCSEEEC
T ss_pred cCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c--ccc-CCCCCEEECcCCcccc-cC--ccccCCCCEEEe
Confidence 46677777777776 33 66666777777777777653 2 444 6667777777777765 55 666666666666
Q ss_pred cccccCCCCChhhhcCC-------CcccccccccccCCCCCcc-CCCCCcccCCCC
Q 035917 177 SNNKLSGPIPYQLSNLG-------RLKKFSVANNDLTGTIPSS-FKGFDKADFDGN 224 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~-------~L~~L~l~~N~l~g~ip~~-~~~~~~~~~~~n 224 (611)
++|+|+|..+..+.+|. +|+.|++++|.+.|.+|.. +.++..+.+.+|
T Consensus 241 ~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n 296 (457)
T 3bz5_A 241 SVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHN 296 (457)
T ss_dssp CSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTC
T ss_pred eCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCC
Confidence 66666665544444443 4455555555555555521 233333444444
No 365
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.19 E-value=1e-13 Score=132.60 Aligned_cols=110 Identities=22% Similarity=0.227 Sum_probs=98.5
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|.+.+ +| .+..+++|+.|+|++|.++ .+|..+.. +++|+.|+|++|.+++ +| .++++++|++|+|
T Consensus 49 ~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~-~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 49 ACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV-ADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH-HHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc-CCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 68899999999998 67 8999999999999999999 79988776 8999999999999997 66 6889999999999
Q ss_pred cccccCCCCC-hhhhcCCCcccccccccccCCCCCcc
Q 035917 177 SNNKLSGPIP-YQLSNLGRLKKFSVANNDLTGTIPSS 212 (611)
Q Consensus 177 ~~N~l~g~iP-~~l~~l~~L~~L~l~~N~l~g~ip~~ 212 (611)
++|.+++.-+ ..+..+++|++|++++|.+++.+|..
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~ 159 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKEN 159 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCccccccccc
Confidence 9999996332 47899999999999999999988763
No 366
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.18 E-value=2.5e-11 Score=134.43 Aligned_cols=96 Identities=31% Similarity=0.470 Sum_probs=45.7
Q ss_pred EEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccccc
Q 035917 98 ILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILS 177 (611)
Q Consensus 98 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~ 177 (611)
+..|+|++|+|++ +|. +.. +|+.|+|++|+|++ ||. . +++|+.|+|++|.|++ ||. .+++|++|+|+
T Consensus 102 L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~-l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 168 (571)
T 3cvr_A 102 LEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---L-PALLEYINADNNQLTM-LPE---LPTSLEVLSVR 168 (571)
T ss_dssp CCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---C-CTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---c-CccccEEeCCCCccCc-CCC---cCCCcCEEECC
Confidence 3444444444444 333 332 44444444444443 443 2 4445555555555543 443 34455555555
Q ss_pred ccccCCCCChhhhcCCCcccccccccccCCCCCc
Q 035917 178 NNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPS 211 (611)
Q Consensus 178 ~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~ 211 (611)
+|+|++ +|. |. ++|+.|+|++|+|+ .+|.
T Consensus 169 ~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~ 197 (571)
T 3cvr_A 169 NNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA 197 (571)
T ss_dssp SSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC
T ss_pred CCCCCC-cch-hh--CCCCEEECcCCCCC-chhh
Confidence 555554 444 33 45555555555555 4444
No 367
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.18 E-value=1.5e-12 Score=141.01 Aligned_cols=94 Identities=31% Similarity=0.368 Sum_probs=58.5
Q ss_pred CEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccC----------------C-cCcccccccccccCCCC
Q 035917 123 QRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGN----------------C-TYLNTLILSNNKLSGPI 185 (611)
Q Consensus 123 ~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~----------------l-~~L~~L~L~~N~l~g~i 185 (611)
+.|++++|.++| +|. ..++|+.|+|++|.++| +|..+.+ + ++|++|+|++|++++ +
T Consensus 74 ~~L~l~~~~l~~-lp~----~~~~L~~L~l~~n~l~~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-l 146 (454)
T 1jl5_A 74 HELELNNLGLSS-LPE----LPPHLESLVASCNSLTE-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-L 146 (454)
T ss_dssp SEEECTTSCCSC-CCS----CCTTCSEEECCSSCCSS-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-C
T ss_pred CEEEecCCcccc-CCC----CcCCCCEEEccCCcCCc-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-C
Confidence 445555555443 222 13467777777777776 5643321 1 466777777777775 6
Q ss_pred ChhhhcCCCcccccccccccCCCCCccCCCCCcccCCCCC
Q 035917 186 PYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDKADFDGNS 225 (611)
Q Consensus 186 P~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~n~ 225 (611)
| .++++++|++|++++|++++ +|..+.++..+.+.+|.
T Consensus 147 p-~~~~l~~L~~L~l~~N~l~~-lp~~~~~L~~L~L~~n~ 184 (454)
T 1jl5_A 147 P-ELQNSSFLKIIDVDNNSLKK-LPDLPPSLEFIAAGNNQ 184 (454)
T ss_dssp C-CCTTCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSC
T ss_pred c-ccCCCCCCCEEECCCCcCcc-cCCCcccccEEECcCCc
Confidence 6 47777788888888887776 66666666666666553
No 368
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.18 E-value=4e-11 Score=122.84 Aligned_cols=102 Identities=26% Similarity=0.480 Sum_probs=59.4
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
+++.|+|++|.+.+..+ +..+++|+.|+|++|.+++ +| .+.. +++|+.|+|++|.+++ +|. +..+++|+.|+|
T Consensus 64 ~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~-l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 64 NLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAG-LQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTT-CTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcC-CCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 45566666666654333 6666666666666666654 33 3444 5666666666666654 332 556666666666
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTG 207 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g 207 (611)
++|.+++..| +..+++|+.|++++|.+++
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCC
Confidence 6666654333 5566666666666666654
No 369
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.17 E-value=4.9e-12 Score=130.10 Aligned_cols=117 Identities=17% Similarity=0.182 Sum_probs=76.1
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|.+++..| +..+++|++|+|++|.+++ +| . +++|+.|+|++|++++..+.. +++|+.|+|
T Consensus 59 ~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~-l~----~-~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l 127 (317)
T 3o53_A 59 KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQE-LL----V-GPSIETLHAANNNISRVSCSR---GQGKKNIYL 127 (317)
T ss_dssp TCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEE-EE----E-CTTCCEEECCSSCCSEEEECC---CSSCEEEEC
T ss_pred cCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccc-cc----C-CCCcCEEECCCCccCCcCccc---cCCCCEEEC
Confidence 56777777777776554 7777777777777777764 33 1 456666666666666544332 456777777
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccC----CCCCcccCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSF----KGFDKADFDGN 224 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~----~~~~~~~~~~n 224 (611)
++|++++..|..++.+++|+.|++++|.+++..|..+ .++..+.+.+|
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 179 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCC
Confidence 7777777666677777777777777777776655543 23444444444
No 370
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.17 E-value=4.3e-11 Score=121.55 Aligned_cols=119 Identities=29% Similarity=0.410 Sum_probs=97.5
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.++..|+|++|.+++. +.+..+++|+.|+|++|.+++ + +.+.. +++|+.|+|++|.+++. ..++++++|+.|+
T Consensus 90 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~-~-~~l~~-l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~ 162 (291)
T 1h6t_A 90 KNLGWLFLDENKVKDL--SSLKDLKKLKSLSLEHNGISD-I-NGLVH-LPQLESLYLGNNKITDI--TVLSRLTKLDTLS 162 (291)
T ss_dssp TTCCEEECCSSCCCCG--GGGTTCTTCCEEECTTSCCCC-C-GGGGG-CTTCCEEECCSSCCCCC--GGGGGCTTCSEEE
T ss_pred CCCCEEECCCCcCCCC--hhhccCCCCCEEECCCCcCCC-C-hhhcC-CCCCCEEEccCCcCCcc--hhhccCCCCCEEE
Confidence 4688999999999872 459999999999999999996 4 45676 99999999999999875 5789999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCC---CcccCCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGF---DKADFDGNS 225 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~---~~~~~~~n~ 225 (611)
|++|.+++..| +..+++|+.|++++|.+++ +|. +..+ ..+.+.+|.
T Consensus 163 L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~~-l~~l~~L~~L~l~~n~ 211 (291)
T 1h6t_A 163 LEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LRA-LAGLKNLDVLELFSQE 211 (291)
T ss_dssp CCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEEEEEEE
T ss_pred ccCCccccchh--hcCCCccCEEECCCCcCCC-Chh-hccCCCCCEEECcCCc
Confidence 99999997665 8999999999999999986 443 4443 334445543
No 371
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.17 E-value=3.2e-11 Score=134.83 Aligned_cols=105 Identities=30% Similarity=0.406 Sum_probs=61.1
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+|++|.|++..| +..|++|+.|+|++|.|++ +| .+.. +++|+.|+|++|.+++ + +.+..|++|+.|+|
T Consensus 66 ~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~-l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~L 138 (605)
T 1m9s_A 66 NVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKD-LKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 138 (605)
T ss_dssp TCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTT-CTTCCEEECTTSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhcc-CCCCCEEEecCCCCCC-C-ccccCCCccCEEEC
Confidence 45666666666665433 5666666666666666653 33 4444 5666666666666654 2 23555666666666
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
++|.|++. ..+..|++|+.|+|++|.+++..|
T Consensus 139 s~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 139 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp CSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 66666643 345566666666666666665544
No 372
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.16 E-value=5.7e-11 Score=128.44 Aligned_cols=100 Identities=26% Similarity=0.422 Sum_probs=69.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|.+.+ +| +++.+++|++|++++|.+++ +|.. .++|++|+|++|++++ +| .++++++|+.|+|
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 56777777777776 66 57888888888888888875 6643 3567777888777776 66 5777777777777
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
++|.+++ +|... ++|+.|++++|.++ .+|
T Consensus 203 ~~N~l~~-l~~~~---~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 203 DNNSLKK-LPDLP---LSLESIVAGNNILE-ELP 231 (454)
T ss_dssp CSSCCSS-CCCCC---TTCCEEECCSSCCS-SCC
T ss_pred CCCcCCc-CCCCc---CcccEEECcCCcCC-ccc
Confidence 7777775 44321 35666666666665 455
No 373
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.16 E-value=3.3e-11 Score=119.45 Aligned_cols=129 Identities=18% Similarity=0.152 Sum_probs=97.1
Q ss_pred eecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCC--ccceeeEEEeCCeeEEEEeccCCCChHHhh
Q 035917 333 ISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPN--LAPLLGYCVVEEEKLLIYKYMSSGTLYSLL 410 (611)
Q Consensus 333 g~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~n--Iv~l~g~~~~~~~~~lv~ey~~~gsL~~~l 410 (611)
+.|..+.||++...+|+.+++|..... ....+.+|+.+++.+++.+ +.+++++...++..++||||++|.+|. .
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~--~ 104 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG--ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL--S 104 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--T
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--c
Confidence 355669999998878888999997653 2245788999999986545 455888887777889999999998884 2
Q ss_pred hcCCCCCCHHHHHHHHHHHHHHHHHHhhcC--------------------------------------------------
Q 035917 411 QGNATELDWPTRFRIGLGAARGLAWLHHGC-------------------------------------------------- 440 (611)
Q Consensus 411 ~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-------------------------------------------------- 440 (611)
.. .+ ...++.++++.|..||...
T Consensus 105 ~~----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 177 (264)
T 1nd4_A 105 SH----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKAR 177 (264)
T ss_dssp SC----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHT
T ss_pred Cc----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHh
Confidence 21 12 2356777888888888421
Q ss_pred -----CCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 441 -----QPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 441 -----~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
...++|+|++|.||+++++..+.|.|||.+..
T Consensus 178 ~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 178 MPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp CCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998776677999998753
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.15 E-value=6.1e-11 Score=118.59 Aligned_cols=102 Identities=27% Similarity=0.330 Sum_probs=55.4
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|.+++..+ +..+++|+.|+|++|++++ +|... .++|+.|+|++|++++ +| .++++++|+.|+|
T Consensus 64 ~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~~---~~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 64 NLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGIP---SACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTCC---CSSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCccc---cCcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 45555666555554333 5555566666666665553 33221 1455666666666554 22 3555666666666
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGT 208 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ 208 (611)
++|++++. | .+..+++|+.|++++|++++.
T Consensus 136 s~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 136 RNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp TTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 66666543 3 355566666666666666554
No 375
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.15 E-value=6e-11 Score=132.62 Aligned_cols=103 Identities=31% Similarity=0.430 Sum_probs=77.6
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+|++|.|++ + +.+..|++|+.|+|++|.|++ +| .+.. |++|+.|+|++|.+++. ..++.|++|+.|+|
T Consensus 88 ~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l~-~l~~-l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 88 NLGWLFLDENKIKD-L-SSLKDLKKLKSLSLEHNGISD-IN-GLVH-LPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp TCCEEECCSSCCCC-C-TTSTTCTTCCEEECTTSCCCC-CG-GGGG-CTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred CCCEEECcCCCCCC-C-hhhccCCCCCEEEecCCCCCC-Cc-cccC-CCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 57778888888776 2 367788888888888888875 43 4665 78888888888888764 46777888888888
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGT 208 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ 208 (611)
++|.|++..| +..+++|+.|+|++|+|++.
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l 190 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL 190 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC
Confidence 8888887666 77788888888888888763
No 376
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.15 E-value=5e-11 Score=119.24 Aligned_cols=117 Identities=24% Similarity=0.380 Sum_probs=95.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.|+|++|+++. +| .+..+++|+.|+|++|.+++ +|+ +.. +++|+.|+|++|++++ +|.... ++|+.|+|
T Consensus 42 ~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~-l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 42 GVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISD-LSP-LKD-LTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp TCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCC-CGG-GTT-CSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred cCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCC-Chh-hcc-CCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 57899999999874 55 68999999999999999996 554 776 9999999999999986 554433 89999999
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccCC---CCCcccCCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFK---GFDKADFDGNS 225 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~---~~~~~~~~~n~ 225 (611)
++|++++ +| .+..+++|+.|++++|++++. | .+. ++..+.+.+|.
T Consensus 114 ~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 114 DNNELRD-TD-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp CSSCCSB-SG-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSC
T ss_pred cCCccCC-Ch-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCc
Confidence 9999997 44 589999999999999999975 4 343 44445566664
No 377
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.15 E-value=5.5e-11 Score=121.79 Aligned_cols=104 Identities=25% Similarity=0.381 Sum_probs=66.3
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+|++|.+.+. +.+..+++|+.|+|++|.+++ +|. +.. +++|+.|+|++|.+++..| ++++++|+.|+|
T Consensus 86 ~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~-l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 158 (308)
T 1h6u_A 86 KITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAG-LSNLQVLYLDLNQITNISP--LAGLTNLQYLSI 158 (308)
T ss_dssp SCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTT-CTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred CCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcC-CCCCCEEECCCCccCcCcc--ccCCCCccEEEc
Confidence 466677777776653 356667777777777777764 443 554 6677777777777664333 666667777777
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTI 209 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~i 209 (611)
++|.+++. |. +..+++|+.|++++|.+++..
T Consensus 159 ~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~~~~ 189 (308)
T 1h6u_A 159 GNAQVSDL-TP-LANLSKLTTLKADDNKISDIS 189 (308)
T ss_dssp CSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCG
T ss_pred cCCcCCCC-hh-hcCCCCCCEEECCCCccCcCh
Confidence 77776653 32 666667777777777666543
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.13 E-value=9.8e-11 Score=126.71 Aligned_cols=99 Identities=19% Similarity=0.206 Sum_probs=58.5
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.+..|+|++|.+++. + ++.+++|+.|++++|.+.|.++ +.. +++|+.|+|++|++++ +| ++.+++|+.|+|
T Consensus 128 ~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~--~~~-l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l 198 (457)
T 3bz5_A 128 LLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLD--VTP-QTQLTTLDCSFNKITE-LD--VSQNKLLNRLNC 198 (457)
T ss_dssp TCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCC--CTT-CTTCCEEECCSSCCCC-CC--CTTCTTCCEEEC
T ss_pred cCCEEECCCCcccee-c--cccCCcCCEEECCCCCcccccc--ccc-CCcCCEEECCCCccce-ec--cccCCCCCEEEC
Confidence 566777777777763 2 5666666666666665555553 334 5666666666666664 44 555555566666
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTG 207 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g 207 (611)
++|.+++. .++.+++|+.|++++|++++
T Consensus 199 ~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 199 DTNNITKL---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp CSSCCSCC---CCTTCTTCSEEECCSSCCSC
T ss_pred cCCcCCee---ccccCCCCCEEECcCCcccc
Confidence 55555543 25555555555555555555
No 379
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.11 E-value=9e-11 Score=127.28 Aligned_cols=103 Identities=28% Similarity=0.406 Sum_probs=65.1
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
++..|+|++|.+.+..| +..+++|+.|+|++|.+++. |+ +.. +++|+.|+|++|++++..| ++++++|+.|+|
T Consensus 244 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~-l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 244 NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAG-LTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTT-CTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccC-CCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 46667777777766543 66666777777777776653 32 444 6666666666666665433 566666666666
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGT 208 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ 208 (611)
++|++++..| +..+++|+.|++++|.+++.
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc
Confidence 6666666554 55666666666666666654
No 380
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.11 E-value=6.3e-11 Score=128.50 Aligned_cols=121 Identities=26% Similarity=0.391 Sum_probs=99.3
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
..+..|+|++|.+++..+ +..+++|+.|+|++|.+++..| +.. +++|+.|+|++|++++..| ++.+++|+.|+
T Consensus 265 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~-l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 337 (466)
T 1o6v_A 265 TKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISN-LKNLTYLTLYFNNISDISP--VSSLTKLQRLF 337 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGG-CTTCSEEECCSSCCSCCGG--GGGCTTCCEEE
T ss_pred CCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcC-CCCCCEEECcCCcCCCchh--hccCccCCEeE
Confidence 368899999999987544 8899999999999999997544 666 9999999999999998776 78999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccCCCCCc-cCCCCCcccCCCCC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPS-SFKGFDKADFDGNS 225 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~-~~~~~~~~~~~~n~ 225 (611)
|++|.+++. ..+..+++|+.|++++|++++.+|- .+..+..+.+.+|.
T Consensus 338 l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~ 386 (466)
T 1o6v_A 338 FYNNKVSDV--SSLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQA 386 (466)
T ss_dssp CCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGGGTTCTTCCEEECCCEE
T ss_pred CCCCccCCc--hhhccCCCCCEEeCCCCccCccchhhcCCCCCEEeccCCc
Confidence 999999976 4689999999999999999998871 22333444455553
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.10 E-value=7.8e-12 Score=129.18 Aligned_cols=106 Identities=21% Similarity=0.329 Sum_probs=51.3
Q ss_pred cEEEEEecCCccccc-CCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCC-cCccc-CccCccCCcCccc
Q 035917 97 RILNLELREMKLSGK-IPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNN-DLSGP-IPADLGNCTYLNT 173 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~-~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N-~l~G~-iP~~~~~l~~L~~ 173 (611)
+++.|+|+++.+++. +|..+..+++|+.|+|++|.+++.+|..+.. +++|+.|+|++| .+++. +|..+.++++|++
T Consensus 94 ~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~-~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 94 RVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK-NSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp CCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT-CTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc-CCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 344555555555443 4444455555555555555555444444444 455555555555 34432 4444444455555
Q ss_pred cccccc-ccCCC-CChhhhcCC-Cccccccccc
Q 035917 174 LILSNN-KLSGP-IPYQLSNLG-RLKKFSVANN 203 (611)
Q Consensus 174 L~L~~N-~l~g~-iP~~l~~l~-~L~~L~l~~N 203 (611)
|+|++| .+++. +|..+..++ +|++|++++|
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~ 205 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGY 205 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSC
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCC
Confidence 555555 44432 344444444 4444444444
No 382
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.09 E-value=7.4e-11 Score=123.03 Aligned_cols=122 Identities=19% Similarity=0.163 Sum_probs=81.5
Q ss_pred CCcccceecCCCC--------CCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCE-EEC
Q 035917 82 ICQFVGVSCWNDK--------ENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVL-LDL 152 (611)
Q Consensus 82 ~c~w~Gv~C~~~~--------~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~-L~L 152 (611)
-|+|..|.|++.. ...++.|+|++|+|+...+..+..|++|++|+|++|.+.+.||...+..+++|.. +++
T Consensus 8 ~C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 8 HCSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EEETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred EeeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 3788999996421 1246677777777775555567777777777777777776676554333666553 556
Q ss_pred cCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCccccccccc
Q 035917 153 SNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANN 203 (611)
Q Consensus 153 s~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N 203 (611)
+.|++++..|..+.++++|++|++++|++++..+..+....++..|++.+|
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~ 138 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN 138 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc
Confidence 667777666667777777777777777777665555555566666766553
No 383
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.09 E-value=5.2e-12 Score=130.54 Aligned_cols=116 Identities=21% Similarity=0.214 Sum_probs=92.0
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCcc-CchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGN-IPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~-ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.+..|++++|.+.+.++. +..+++|+.|+|++|.+++. +|..+.. +++|+.|+|++|.+++.+|..++++++|++|+
T Consensus 71 ~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~-~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQ-CSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTT-BCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred cceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhh-CCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 466777777777776555 56788889999998888876 7777776 88899999999888888888888888899999
Q ss_pred cccc-ccCC-CCChhhhcCCCccccccccc-ccCCC-CCccCC
Q 035917 176 LSNN-KLSG-PIPYQLSNLGRLKKFSVANN-DLTGT-IPSSFK 214 (611)
Q Consensus 176 L~~N-~l~g-~iP~~l~~l~~L~~L~l~~N-~l~g~-ip~~~~ 214 (611)
|++| .+++ .+|..+.++++|+.|++++| .+++. +|..+.
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~ 191 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA 191 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHH
Confidence 9888 6776 37777888888999999888 88764 454443
No 384
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.08 E-value=2.6e-11 Score=135.76 Aligned_cols=124 Identities=27% Similarity=0.357 Sum_probs=88.8
Q ss_pred CCCccccee--------cCCCCCCcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEEC
Q 035917 81 FICQFVGVS--------CWNDKENRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDL 152 (611)
Q Consensus 81 ~~c~w~Gv~--------C~~~~~~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~L 152 (611)
.+|.|.|.. |.. ..++.|++++++|+ .+|..+. ++|+.|+|++|+|+ .||. . +++|++|+|
T Consensus 20 ~~~~~~~r~~~~~~~~~c~~---~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~-l~~L~~L~L 88 (622)
T 3g06_A 20 PAEESRGRAAVVQKMRACLN---NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---L-PPELRTLEV 88 (622)
T ss_dssp CGGGHHHHHHHHHHHHHHHH---HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---C-CTTCCEEEE
T ss_pred CcchhccccccCcccccccC---CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---c-CCCCCEEEc
Confidence 478997643 321 24778899998888 7777665 78888888888888 5776 3 788888888
Q ss_pred cCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCcccccccccccCCCCCccCCCCCcccCCCC
Q 035917 153 SNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSFKGFDKADFDGN 224 (611)
Q Consensus 153 s~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~~~~~~~~~~~n 224 (611)
++|+++ .||. .+++|++|+|++|++++ +|. .+++|+.|++++|++++ +|..+.++..+.+.+|
T Consensus 89 s~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~l~~L~~L~Ls~N 151 (622)
T 3g06_A 89 SGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVLPPGLQELSVSDN 151 (622)
T ss_dssp CSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSS
T ss_pred CCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCCCCCCCEEECcCC
Confidence 888887 5775 56788888888888875 444 45667777777777765 5665556655555555
No 385
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.07 E-value=1.6e-11 Score=129.64 Aligned_cols=129 Identities=16% Similarity=0.245 Sum_probs=107.4
Q ss_pred CcEEEEEecCCccc-ccCC---ccCcCCCCCCEEEccCCCCC--c---cCchhHHhcCCCCCEEECcCCcCc----ccCc
Q 035917 96 NRILNLELREMKLS-GKIP---EPLKFCKSMQRLDLSANDLS--G---NIPAQICNWLPYLVLLDLSNNDLS----GPIP 162 (611)
Q Consensus 96 ~~v~~l~l~~~~l~-g~~p---~~l~~l~~L~~L~Ls~N~l~--g---~ip~~~~~~l~~L~~L~Ls~N~l~----G~iP 162 (611)
..+..|+|++|+++ +.+| ..+..+++|+.|+|++|.++ | .+|..+.. +++|+.|+|++|.++ +.+|
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~-~~~L~~L~Ls~n~l~~~g~~~l~ 237 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAY-CQELKVLDLQDNTFTHLGSSALA 237 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGG-CTTCCEEECCSSCCHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhc-CCCccEEECcCCCCCcHHHHHHH
Confidence 37889999999998 5555 46788999999999999998 4 34446766 899999999999997 7899
Q ss_pred cCccCCcCcccccccccccCCC----CChhhhc--CCCcccccccccccCC----CCCccC----CCCCcccCCCCC
Q 035917 163 ADLGNCTYLNTLILSNNKLSGP----IPYQLSN--LGRLKKFSVANNDLTG----TIPSSF----KGFDKADFDGNS 225 (611)
Q Consensus 163 ~~~~~l~~L~~L~L~~N~l~g~----iP~~l~~--l~~L~~L~l~~N~l~g----~ip~~~----~~~~~~~~~~n~ 225 (611)
..+..+++|+.|+|++|.+++. +|..+.. +++|+.|+|++|.+++ .+|..+ .++..+.+.+|.
T Consensus 238 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~ 314 (386)
T 2ca6_A 238 IALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNR 314 (386)
T ss_dssp HHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSB
T ss_pred HHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCc
Confidence 9999999999999999999876 6777744 9999999999999998 588755 455566666664
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.06 E-value=6.6e-12 Score=132.70 Aligned_cols=129 Identities=18% Similarity=0.276 Sum_probs=106.5
Q ss_pred CcEEEEEecCCcccc----cCCccCcCC---------CCCCEEEccCCCCC-ccCc---hhHHhcCCCCCEEECcCCcCc
Q 035917 96 NRILNLELREMKLSG----KIPEPLKFC---------KSMQRLDLSANDLS-GNIP---AQICNWLPYLVLLDLSNNDLS 158 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g----~~p~~l~~l---------~~L~~L~Ls~N~l~-g~ip---~~~~~~l~~L~~L~Ls~N~l~ 158 (611)
..++.|+|++|.+++ .++..+..+ ++|+.|+|++|.++ +.+| ..+.. +++|+.|+|++|.++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~-~~~L~~L~L~~n~l~ 200 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS-HRLLHTVKMVQNGIR 200 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH-CTTCCEEECCSSCCC
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh-CCCcCEEECcCCCCC
Confidence 368899999999974 356667667 89999999999998 5666 46666 899999999999998
Q ss_pred --c---cCccCccCCcCcccccccccccC----CCCChhhhcCCCcccccccccccCCC----CCcc-----CCCCCccc
Q 035917 159 --G---PIPADLGNCTYLNTLILSNNKLS----GPIPYQLSNLGRLKKFSVANNDLTGT----IPSS-----FKGFDKAD 220 (611)
Q Consensus 159 --G---~iP~~~~~l~~L~~L~L~~N~l~----g~iP~~l~~l~~L~~L~l~~N~l~g~----ip~~-----~~~~~~~~ 220 (611)
| .+|..+.++++|+.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. +|.. +.++..+.
T Consensus 201 ~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~ 280 (386)
T 2ca6_A 201 PEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLR 280 (386)
T ss_dssp HHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEE
T ss_pred HhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEE
Confidence 4 46668899999999999999997 78999999999999999999999876 5554 34455566
Q ss_pred CCCCC
Q 035917 221 FDGNS 225 (611)
Q Consensus 221 ~~~n~ 225 (611)
+.+|.
T Consensus 281 L~~n~ 285 (386)
T 2ca6_A 281 LQYNE 285 (386)
T ss_dssp CCSSC
T ss_pred CcCCc
Confidence 66654
No 387
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.05 E-value=1.4e-10 Score=120.43 Aligned_cols=104 Identities=28% Similarity=0.366 Sum_probs=92.1
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccc
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
..++.|+|++|.+++. +.+..+++|+.|+|++|.+++ +| .+.. +++|+.|+|++|.+++..|..++++++|+.|+
T Consensus 243 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~-~~~~-l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 317 (347)
T 4fmz_A 243 SQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD-IS-VLNN-LSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLF 317 (347)
T ss_dssp TTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC-CG-GGGG-CTTCSEEECCSSCCCGGGHHHHHTCTTCSEEE
T ss_pred CCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC-Ch-hhcC-CCCCCEEECcCCcCCCcChhHhhccccCCEEE
Confidence 4688999999999874 568999999999999999996 44 4666 99999999999999999999999999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccccccccC
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSVANNDLT 206 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~ 206 (611)
|++|.+++..| +..+++|+.|++++|.++
T Consensus 318 L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 318 LSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ccCCccccccC--hhhhhccceeehhhhccc
Confidence 99999998777 889999999999999886
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.04 E-value=3.6e-11 Score=125.94 Aligned_cols=113 Identities=20% Similarity=0.199 Sum_probs=83.4
Q ss_pred cEEEEEecCCcccccCC----ccCcCCC-CCCEEEccCCCCCccCchhHHhcC-----CCCCEEECcCCcCcccCccCcc
Q 035917 97 RILNLELREMKLSGKIP----EPLKFCK-SMQRLDLSANDLSGNIPAQICNWL-----PYLVLLDLSNNDLSGPIPADLG 166 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p----~~l~~l~-~L~~L~Ls~N~l~g~ip~~~~~~l-----~~L~~L~Ls~N~l~G~iP~~~~ 166 (611)
.++.|+|++|.+++..+ ..+..++ +|+.|+|++|.+++..+..+.. + ++|+.|+|++|.+++..+..++
T Consensus 23 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~-~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 23 GVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQ-ILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHH-HHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHH-HHhccCCCccEEECcCCcCChHHHHHHH
Confidence 47788888888877666 5667777 7888888888888776766665 3 7888888888888877776544
Q ss_pred C----C-cCcccccccccccCCCCChhhhc-----CCCcccccccccccCCCCC
Q 035917 167 N----C-TYLNTLILSNNKLSGPIPYQLSN-----LGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 167 ~----l-~~L~~L~L~~N~l~g~iP~~l~~-----l~~L~~L~l~~N~l~g~ip 210 (611)
. + ++|++|+|++|.+++..+..+.. .++|++|+|++|.+++..+
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~ 155 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSS 155 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCH
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHH
Confidence 3 3 78888888888887766655443 2588888888888875443
No 389
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.02 E-value=4.8e-11 Score=125.01 Aligned_cols=117 Identities=21% Similarity=0.231 Sum_probs=87.0
Q ss_pred cEEEEEecCCcccccCCccCcCC-----CCCCEEEccCCCCCccCchhHHhc---C-CCCCEEECcCCcCcccCccCccC
Q 035917 97 RILNLELREMKLSGKIPEPLKFC-----KSMQRLDLSANDLSGNIPAQICNW---L-PYLVLLDLSNNDLSGPIPADLGN 167 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l-----~~L~~L~Ls~N~l~g~ip~~~~~~---l-~~L~~L~Ls~N~l~G~iP~~~~~ 167 (611)
+++.|+|++|.+++..+..++.+ ++|+.|+|++|.+++..+..+... + ++|+.|+|++|.+++..+..+..
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 58888888888888777666654 888888888888887777655541 2 78888888888888766655433
Q ss_pred -----CcCcccccccccccCCCCC----hhhhcCC-CcccccccccccCCCCCccC
Q 035917 168 -----CTYLNTLILSNNKLSGPIP----YQLSNLG-RLKKFSVANNDLTGTIPSSF 213 (611)
Q Consensus 168 -----l~~L~~L~L~~N~l~g~iP----~~l~~l~-~L~~L~l~~N~l~g~ip~~~ 213 (611)
.++|++|+|++|.+++.-+ ..+..++ +|+.|+|++|++++..+..+
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 187 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAEL 187 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHH
Confidence 3688888888888886443 3445555 88888888888887766433
No 390
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.02 E-value=7.7e-10 Score=115.61 Aligned_cols=140 Identities=15% Similarity=0.207 Sum_probs=106.1
Q ss_pred CCeeeecCCceEEEEEeCCCCEEEEEecc--ccc--hhHHHHHHHHHHHhccC--CCCccceeeEEEeC---CeeEEEEe
Q 035917 329 ENVIISTRTGTTYKAMLPDGSVLAVKRLN--TCK--LGEKKFRNEMNRLGQLR--HPNLAPLLGYCVVE---EEKLLIYK 399 (611)
Q Consensus 329 ~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~--~~~--~~~~~~~~Ev~~l~~l~--H~nIv~l~g~~~~~---~~~~lv~e 399 (611)
.+.++.|.++.||+....+ ..+++|+.. ... .....+.+|+.+++.++ +..+.++++++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 3568889999999988754 678889876 332 22456889999999997 45678888888766 44799999
Q ss_pred ccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC---------------------------------------
Q 035917 400 YMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGC--------------------------------------- 440 (611)
Q Consensus 400 y~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------- 440 (611)
|++|..+.+... ..++...+..++.++++.|..||...
T Consensus 122 ~v~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 122 FVSGRVLWDQSL---PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp CCCCBCCCCTTC---TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred ecCCeecCCCcc---ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 999987754221 24778888899999999999999620
Q ss_pred ----------------CCCeeecCCCCCeEEeCCCCC--eEEeecccccc
Q 035917 441 ----------------QPPFLHQNICSNVILVDEDFD--ARIMDFGLAKL 472 (611)
Q Consensus 441 ----------------~~~ivHrDlkp~NILld~~~~--~kl~DFGla~~ 472 (611)
...++|+|+++.||+++.++. +.|.||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 256999999999999997653 68999998874
No 391
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.02 E-value=1e-10 Score=130.99 Aligned_cols=88 Identities=23% Similarity=0.302 Sum_probs=59.5
Q ss_pred CCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccccccCCCCChhhhcCCCccccc
Q 035917 120 KSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFS 199 (611)
Q Consensus 120 ~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~ 199 (611)
++|+.|+|++|+|++ +| .. +++|+.|+|++|+|+ .||. .+++|+.|+|++|+|+ .+|..+.++++|+.|+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~-l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~ 290 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VL-PSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVN 290 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CC-CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEE
T ss_pred CCCCEEEccCCccCc-CC---CC-CCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEE
Confidence 556666666666664 55 22 566777777777776 4565 4567777777777777 6677777777777777
Q ss_pred ccccccCCCCCccCCCCC
Q 035917 200 VANNDLTGTIPSSFKGFD 217 (611)
Q Consensus 200 l~~N~l~g~ip~~~~~~~ 217 (611)
|++|.++|.+|..+..+.
T Consensus 291 L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 291 LEGNPLSERTLQALREIT 308 (622)
T ss_dssp CCSCCCCHHHHHHHHHHH
T ss_pred ecCCCCCCcCHHHHHhcc
Confidence 777777777776655443
No 392
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.98 E-value=3.3e-11 Score=120.05 Aligned_cols=126 Identities=21% Similarity=0.225 Sum_probs=88.4
Q ss_pred CCcccceecCCCCCCcEEEEEecC---CcccccCCcc------------------------CcCCCCCCE--EEccCCCC
Q 035917 82 ICQFVGVSCWNDKENRILNLELRE---MKLSGKIPEP------------------------LKFCKSMQR--LDLSANDL 132 (611)
Q Consensus 82 ~c~w~Gv~C~~~~~~~v~~l~l~~---~~l~g~~p~~------------------------l~~l~~L~~--L~Ls~N~l 132 (611)
.|+|.|+.|+.+ .-+|+.+...+ ..+.|.+++. +...+.|.. ++++.|..
T Consensus 77 l~~~~g~i~~~~-~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~~ 155 (267)
T 3rw6_A 77 LKAVNYKILDRE-NRRISIIINSSAPPHTILNELKPEQVEQLKLIMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNRR 155 (267)
T ss_dssp HHHTTSSCBCTT-SCBCCCEEEECCCCHHHHTSCCHHHHHHHHHHHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTSH
T ss_pred HHhcCcEEECCC-CCEEEEEEecCCCcccccccCCHHHHHHHHHHHHhccchhccccCHHHcCCCcchhhcCccccCCHH
Confidence 689999999743 34676666655 3455555431 122223333 55666643
Q ss_pred CccCchhH---HhcCCCCCEEECcCCcCcc--cCccCccCCcCcccccccccccCCCCChhhhcCC--Cccccccccccc
Q 035917 133 SGNIPAQI---CNWLPYLVLLDLSNNDLSG--PIPADLGNCTYLNTLILSNNKLSGPIPYQLSNLG--RLKKFSVANNDL 205 (611)
Q Consensus 133 ~g~ip~~~---~~~l~~L~~L~Ls~N~l~G--~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~--~L~~L~l~~N~l 205 (611)
. .++..+ ...+++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+
T Consensus 156 ~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 156 S-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp H-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred H-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 2 333322 1238999999999999998 7778888999999999999999976 3455555 899999999999
Q ss_pred CCCCCc
Q 035917 206 TGTIPS 211 (611)
Q Consensus 206 ~g~ip~ 211 (611)
++.+|.
T Consensus 233 ~~~~~~ 238 (267)
T 3rw6_A 233 CDTFRD 238 (267)
T ss_dssp GGGCSS
T ss_pred ccccCc
Confidence 998873
No 393
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.82 E-value=3.7e-09 Score=110.09 Aligned_cols=109 Identities=22% Similarity=0.213 Sum_probs=91.8
Q ss_pred EEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchh-HHhcCCCCCEEECcCCcCcccCcc-CccCCcCccc-ccc
Q 035917 100 NLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQ-ICNWLPYLVLLDLSNNDLSGPIPA-DLGNCTYLNT-LIL 176 (611)
Q Consensus 100 ~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~-~~~~l~~L~~L~Ls~N~l~G~iP~-~~~~l~~L~~-L~L 176 (611)
.++.++++|+ .+|..+ .++|+.|+|++|+|+ .||+. |.. +++|+.|+|++|++.+.||. .+.++++|+. +++
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~-l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSG-FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTT-CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcC-CCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 4678899988 677766 468999999999999 67764 566 99999999999999888886 4688888764 677
Q ss_pred cccccCCCCChhhhcCCCcccccccccccCCCCCccC
Q 035917 177 SNNKLSGPIPYQLSNLGRLKKFSVANNDLTGTIPSSF 213 (611)
Q Consensus 177 ~~N~l~g~iP~~l~~l~~L~~L~l~~N~l~g~ip~~~ 213 (611)
+.|++++..|..|..+++|++|++++|++++..+..+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~ 124 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK 124 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTT
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhh
Confidence 8899998888999999999999999999997665544
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.79 E-value=3.3e-10 Score=122.17 Aligned_cols=130 Identities=20% Similarity=0.286 Sum_probs=98.6
Q ss_pred CcEEEEEecCCccccc----CCccCcCCCCCCEEEccCCCCCccCchhHHhc----CCCCCEEECcCCcCccc----Ccc
Q 035917 96 NRILNLELREMKLSGK----IPEPLKFCKSMQRLDLSANDLSGNIPAQICNW----LPYLVLLDLSNNDLSGP----IPA 163 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~----~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~----l~~L~~L~Ls~N~l~G~----iP~ 163 (611)
..+..|+|++|.+++. ++..+..+++|+.|+|++|.+++..+..+... .++|+.|+|++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 3688999999998875 67777888999999999999876655555442 26899999999998876 566
Q ss_pred CccCCcCcccccccccccCCCCChhhhc-----CCCcccccccccccCC----CCCccC---CCCCcccCCCCC
Q 035917 164 DLGNCTYLNTLILSNNKLSGPIPYQLSN-----LGRLKKFSVANNDLTG----TIPSSF---KGFDKADFDGNS 225 (611)
Q Consensus 164 ~~~~l~~L~~L~L~~N~l~g~iP~~l~~-----l~~L~~L~l~~N~l~g----~ip~~~---~~~~~~~~~~n~ 225 (611)
.+.++++|+.|+|++|.+++..+..+.. .++|+.|++++|.+++ .+|..+ .++..+.+.+|.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 7778889999999999888766655543 6788999999998886 677654 344555566664
No 395
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.78 E-value=4.2e-09 Score=107.37 Aligned_cols=189 Identities=17% Similarity=0.157 Sum_probs=120.2
Q ss_pred CCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccC-CCC--ccceeeEEEeCC---eeEEEEeccC
Q 035917 329 ENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR-HPN--LAPLLGYCVVEE---EKLLIYKYMS 402 (611)
Q Consensus 329 ~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~-H~n--Iv~l~g~~~~~~---~~~lv~ey~~ 402 (611)
.+.++.|....||+.. ..+++|+.... .....+.+|+++|+.+. +.. +.+++.+....+ ..|+||||++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 3568999999999853 56888886532 34567899999998884 333 233443332222 3478999999
Q ss_pred CCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhc-------------------------------------------
Q 035917 403 SGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHG------------------------------------------- 439 (611)
Q Consensus 403 ~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------- 439 (611)
|.+|.+.... .++..++..++.++++.+..||..
T Consensus 100 G~~l~~~~~~---~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 176 (304)
T 3sg8_A 100 GVPLTPLLLN---NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDF 176 (304)
T ss_dssp CEECCHHHHH---TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHH
T ss_pred CeECCccccc---cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHH
Confidence 9888653321 366677778888888888888841
Q ss_pred ------------CCCCeeecCCCCCeEEeCC--CCCeEEeecccccccCCCCCCccccCC---Ccc---------ccccc
Q 035917 440 ------------CQPPFLHQNICSNVILVDE--DFDARIMDFGLAKLMTSSDESSFVNGD---LGE---------FGYIA 493 (611)
Q Consensus 440 ------------~~~~ivHrDlkp~NILld~--~~~~kl~DFGla~~~~~~~~~~~~~~~---~gt---------~~y~a 493 (611)
....++|+|++|.||++++ ...+.|.||+.+..-.....-...... .+. .++..
T Consensus 177 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y~~~~ 256 (304)
T 3sg8_A 177 YRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHYKHKD 256 (304)
T ss_dssp HHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHHTCSC
T ss_pred HHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHcCCCC
Confidence 1135899999999999987 456789999988753221100000000 000 01111
Q ss_pred -ccccCCCCCCcccchHHHHHHHHHHhCCCCCHHH
Q 035917 494 -PEYSSTMVASLKGDVYGIGVVLLELAGFKGNLVD 527 (611)
Q Consensus 494 -PE~~~~~~~t~ksDV~SfGvvl~ell~~~~~~~~ 527 (611)
|+.... .....+.|+++.++|.+.+|..++..
T Consensus 257 ~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~~~ 289 (304)
T 3sg8_A 257 IPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDWYE 289 (304)
T ss_dssp HHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 221111 11236899999999999999876644
No 396
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.77 E-value=2.7e-10 Score=122.80 Aligned_cols=129 Identities=15% Similarity=0.083 Sum_probs=101.8
Q ss_pred CcEEEEEecCCcccccC----Ccc-CcCCCCCCEEEccCCCCCcc----CchhHHhcCCCCCEEECcCCcCcccCccCcc
Q 035917 96 NRILNLELREMKLSGKI----PEP-LKFCKSMQRLDLSANDLSGN----IPAQICNWLPYLVLLDLSNNDLSGPIPADLG 166 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~----p~~-l~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~ 166 (611)
..++.|+|++|.+.+.- .+. ...+++|+.|+|++|.+++. +|..+.. +++|+.|+|++|.+++..+..+.
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~-~~~L~~L~Ls~n~i~~~~~~~l~ 305 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRA-KESLKELSLAGNELGDEGARLLC 305 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHH-CTTCCEEECTTCCCHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhh-CCCcceEECCCCCCchHHHHHHH
Confidence 36889999999987642 222 34689999999999999975 7888877 99999999999999876555444
Q ss_pred C-----CcCcccccccccccCCC----CChhhhcCCCcccccccccccCCCCCccC--------CCCCcccCCCCC
Q 035917 167 N-----CTYLNTLILSNNKLSGP----IPYQLSNLGRLKKFSVANNDLTGTIPSSF--------KGFDKADFDGNS 225 (611)
Q Consensus 167 ~-----l~~L~~L~L~~N~l~g~----iP~~l~~l~~L~~L~l~~N~l~g~ip~~~--------~~~~~~~~~~n~ 225 (611)
. .++|+.|+|++|.+++. +|..+..+++|+.|++++|.+++..+..+ .++..+.+.+|.
T Consensus 306 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 306 ETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 3 36999999999999976 67778889999999999999987655433 255556666653
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.67 E-value=1.8e-08 Score=100.31 Aligned_cols=81 Identities=23% Similarity=0.323 Sum_probs=69.1
Q ss_pred cCCCCCCEEEccCCCCCc--cCchhHHhcCCCCCEEECcCCcCcccCccCccCCc--CcccccccccccCCCCCh-----
Q 035917 117 KFCKSMQRLDLSANDLSG--NIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCT--YLNTLILSNNKLSGPIPY----- 187 (611)
Q Consensus 117 ~~l~~L~~L~Ls~N~l~g--~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~--~L~~L~L~~N~l~g~iP~----- 187 (611)
.++++|+.|+||+|+|++ .+|..+.. +++|+.|+|++|+|++. ..+..+. +|++|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~-l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~ 243 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQK-APNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYI 243 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHH-STTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhh-CCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHH
Confidence 468899999999999998 67777877 99999999999999976 3455555 999999999999998883
Q ss_pred --hhhcCCCcccccc
Q 035917 188 --QLSNLGRLKKFSV 200 (611)
Q Consensus 188 --~l~~l~~L~~L~l 200 (611)
.+..+++|+.||=
T Consensus 244 ~~il~~~P~L~~LDg 258 (267)
T 3rw6_A 244 SAIRERFPKLLRLDG 258 (267)
T ss_dssp HHHHHHCTTCCEESS
T ss_pred HHHHHHCcccCeECC
Confidence 3678899998873
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.60 E-value=6.6e-09 Score=109.14 Aligned_cols=129 Identities=20% Similarity=0.183 Sum_probs=82.9
Q ss_pred cEEEEEecCCcccccCCccC-cCCCCCCEEEccCCCCCccCchhHHh----cCCCCCEEECcCCcCcc----cCccCccC
Q 035917 97 RILNLELREMKLSGKIPEPL-KFCKSMQRLDLSANDLSGNIPAQICN----WLPYLVLLDLSNNDLSG----PIPADLGN 167 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l-~~l~~L~~L~Ls~N~l~g~ip~~~~~----~l~~L~~L~Ls~N~l~G----~iP~~~~~ 167 (611)
.++.|+|++|.++..-...+ ..+++|+.|+|++|.|+..-...+.. ..++|+.|+|++|.++. .++..+..
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 68888888888765333332 23567788888888887543334332 14678888888888764 24445567
Q ss_pred CcCcccccccccccCC----CCChhhhcCCCcccccccccccCCC----CCccC---CCCCcccCCCCC
Q 035917 168 CTYLNTLILSNNKLSG----PIPYQLSNLGRLKKFSVANNDLTGT----IPSSF---KGFDKADFDGNS 225 (611)
Q Consensus 168 l~~L~~L~L~~N~l~g----~iP~~l~~l~~L~~L~l~~N~l~g~----ip~~~---~~~~~~~~~~n~ 225 (611)
+++|++|||++|.|+. .++..+...++|+.|+|++|.++.. ++..+ .++..+.+.+|.
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNE 250 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSS
T ss_pred CCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCC
Confidence 7788888888888764 2345566777888888888887642 22222 344555555553
No 399
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.56 E-value=3.4e-07 Score=93.93 Aligned_cols=137 Identities=15% Similarity=0.137 Sum_probs=99.4
Q ss_pred cCCCCCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCC---C-CccceeeEEEeCCeeEEEEec
Q 035917 325 SFCSENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH---P-NLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 325 ~f~~~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H---~-nIv~l~g~~~~~~~~~lv~ey 400 (611)
.....+.++.|....||+. |+.+++|+.... .....+.+|.+++..+.+ + .+.+++++ +..++||||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~-~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~ 108 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD-SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKY 108 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH-HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEEC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH-HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEee
Confidence 4445578999999999997 667888876432 224568999999988876 1 23344443 567899999
Q ss_pred cCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 035917 401 MSSGTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGC---------------------------------------- 440 (611)
Q Consensus 401 ~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~---------------------------------------- 440 (611)
++|.++.+... ..++..++..++.++++.+..||...
T Consensus 109 i~G~~l~~~~~---~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (320)
T 3r70_A 109 IKGERITYEQY---HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEM 185 (320)
T ss_dssp CCCBCCCHHHH---TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHH
T ss_pred cCCcccccccc---ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccc
Confidence 99988864332 13566667777778888888777421
Q ss_pred --------------------CCCeeecCCCCCeEEeCCCCCeEEeeccccccc
Q 035917 441 --------------------QPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 441 --------------------~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~ 473 (611)
...++|+|++|.||+++.+..+.|.||+.+..-
T Consensus 186 ~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 186 LEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred hHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 123599999999999998666799999988643
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.52 E-value=3.1e-09 Score=111.65 Aligned_cols=113 Identities=19% Similarity=0.164 Sum_probs=83.2
Q ss_pred cEEEEEecCCcccccCCccC-----cCCCCCCEEEccCCCCCcc----CchhHHhcCCCCCEEECcCCcCccc----Ccc
Q 035917 97 RILNLELREMKLSGKIPEPL-----KFCKSMQRLDLSANDLSGN----IPAQICNWLPYLVLLDLSNNDLSGP----IPA 163 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l-----~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~G~----iP~ 163 (611)
+++.|+|++|+|+..-...+ ...+.|+.|+|++|.|+.. ++..+.. +++|++|||++|.++.. ++.
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~-~~~L~~L~Ls~N~l~~~g~~~L~~ 205 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG-NTSVTHLSLLHTGLGDEGLELLAA 205 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT-CSSCCEEECTTSSCHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc-CCCcCEEeCCCCCCCcHHHHHHHH
Confidence 57889999998875433333 2467899999999998742 4445555 78899999999998742 455
Q ss_pred CccCCcCcccccccccccCC----CCChhhhcCCCcccccccccccCCCCC
Q 035917 164 DLGNCTYLNTLILSNNKLSG----PIPYQLSNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 164 ~~~~l~~L~~L~L~~N~l~g----~iP~~l~~l~~L~~L~l~~N~l~g~ip 210 (611)
.+..+++|+.|+|++|.++. .++..+...++|++|+|++|.++..-.
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~ 256 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGR 256 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHH
Confidence 66777889999999998875 344456667889999999998875433
No 401
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.41 E-value=2.3e-08 Score=111.30 Aligned_cols=128 Identities=9% Similarity=0.056 Sum_probs=92.6
Q ss_pred cEEEEEecCCcccccCCccCcC-CCCCCEEEcc----CCCCCcc-----CchhHHhcCCCCCEEECcCC--cCcccCccC
Q 035917 97 RILNLELREMKLSGKIPEPLKF-CKSMQRLDLS----ANDLSGN-----IPAQICNWLPYLVLLDLSNN--DLSGPIPAD 164 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~-l~~L~~L~Ls----~N~l~g~-----ip~~~~~~l~~L~~L~Ls~N--~l~G~iP~~ 164 (611)
++..|+|+.+++++..+..++. +++|+.|+|+ .|.+++. ++..+.. +++|+.|+|+++ .+++..+..
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~-~~~L~~L~L~~~~~~l~~~~~~~ 457 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIG-CKKLRRFAFYLRQGGLTDLGLSY 457 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHH-CTTCCEEEEECCGGGCCHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHh-CCCCCEEEEecCCCCccHHHHHH
Confidence 5778888888888877777765 8889999996 6788863 5555655 888888888743 477666666
Q ss_pred ccC-CcCcccccccccccCC-CCChhhhcCCCcccccccccccCCCC-Ccc---CCCCCcccCCCCC
Q 035917 165 LGN-CTYLNTLILSNNKLSG-PIPYQLSNLGRLKKFSVANNDLTGTI-PSS---FKGFDKADFDGNS 225 (611)
Q Consensus 165 ~~~-l~~L~~L~L~~N~l~g-~iP~~l~~l~~L~~L~l~~N~l~g~i-p~~---~~~~~~~~~~~n~ 225 (611)
++. +++|+.|+|++|++++ .+|..+.++++|+.|++++|.+++.. +.. +.++..+.+.+|.
T Consensus 458 ~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 458 IGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp HHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred HHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 654 7888888888888876 45666678888888888888886553 322 3455555666654
No 402
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.35 E-value=8.1e-08 Score=90.41 Aligned_cols=110 Identities=17% Similarity=0.187 Sum_probs=82.4
Q ss_pred CcEEEEEecCC-cccc----cCCccCcCCCCCCEEEccCCCCCcc----CchhHHhcCCCCCEEECcCCcCccc----Cc
Q 035917 96 NRILNLELREM-KLSG----KIPEPLKFCKSMQRLDLSANDLSGN----IPAQICNWLPYLVLLDLSNNDLSGP----IP 162 (611)
Q Consensus 96 ~~v~~l~l~~~-~l~g----~~p~~l~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~G~----iP 162 (611)
..++.|+|++| .+.. .+...+...+.|++|+|++|.+... +...+.. .+.|+.|+|++|.++.. +.
T Consensus 36 ~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~-n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 36 PDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKV-NNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp TTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHH-CSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHh-CCCcCEEECcCCcCCHHHHHHHH
Confidence 36888999988 7764 2445567788999999999998743 3444444 67899999999998753 55
Q ss_pred cCccCCcCcccccc--cccccCCC----CChhhhcCCCcccccccccccC
Q 035917 163 ADLGNCTYLNTLIL--SNNKLSGP----IPYQLSNLGRLKKFSVANNDLT 206 (611)
Q Consensus 163 ~~~~~l~~L~~L~L--~~N~l~g~----iP~~l~~l~~L~~L~l~~N~l~ 206 (611)
..+...++|++|+| ++|.++.. +...+...++|+.|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 66777888999999 88888754 3344566688999999888764
No 403
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.34 E-value=3.2e-06 Score=85.35 Aligned_cols=74 Identities=20% Similarity=0.211 Sum_probs=59.5
Q ss_pred CCeeeecCCceEEEEEeCCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCC---CccceeeEEEeCCeeEEEEeccCCC
Q 035917 329 ENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHP---NLAPLLGYCVVEEEKLLIYKYMSSG 404 (611)
Q Consensus 329 ~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~---nIv~l~g~~~~~~~~~lv~ey~~~g 404 (611)
.+.|+.|.++.||++...+|+.++||+..... .....|..|++.|+.+++. .+.+++++. ..++||||++++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~ 95 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccC
Confidence 46799999999999999999999999975432 2346789999999999875 466777653 368999999998
Q ss_pred Ch
Q 035917 405 TL 406 (611)
Q Consensus 405 sL 406 (611)
++
T Consensus 96 ~~ 97 (288)
T 3d1u_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 75
No 404
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.34 E-value=3e-06 Score=86.31 Aligned_cols=135 Identities=15% Similarity=0.124 Sum_probs=91.0
Q ss_pred CeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCC---CccceeeEEE-eCCeeEEEEeccCCCC
Q 035917 330 NVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHP---NLAPLLGYCV-VEEEKLLIYKYMSSGT 405 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~---nIv~l~g~~~-~~~~~~lv~ey~~~gs 405 (611)
+.++.|....||+. |..+++|+-.. ......+.+|+++|..+.+. .+.+.+.++. ..+..++||||++|..
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~ 99 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQI 99 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeE
Confidence 46788888899987 56788888532 23346789999999999753 2455666664 3455789999999988
Q ss_pred hHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhc----------------------------------------------
Q 035917 406 LYSLLQGNATELDWPTRFRIGLGAARGLAWLHHG---------------------------------------------- 439 (611)
Q Consensus 406 L~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~---------------------------------------------- 439 (611)
+.+.... .++...+..++.++++.|..||..
T Consensus 100 l~~~~~~---~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~ 176 (306)
T 3tdw_A 100 LGEDGMA---VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRF 176 (306)
T ss_dssp CHHHHHT---TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHH
T ss_pred Cchhhhh---hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHH
Confidence 7653211 133334444444444444444421
Q ss_pred -----------CCCCeeecCCCCCeEEeCC---CCC-eEEeecccccc
Q 035917 440 -----------CQPPFLHQNICSNVILVDE---DFD-ARIMDFGLAKL 472 (611)
Q Consensus 440 -----------~~~~ivHrDlkp~NILld~---~~~-~kl~DFGla~~ 472 (611)
....++|+|+++.||+++. ++. ..|.||+.+..
T Consensus 177 ~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 177 QSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2345799999999999987 455 48999997764
No 405
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.28 E-value=4.1e-06 Score=83.27 Aligned_cols=135 Identities=18% Similarity=0.141 Sum_probs=92.9
Q ss_pred eeeecCCc-eEEEEEeC-CCCEEEEEeccccchhHHHHHHHHHHHhccC-CCCccceeeEEEeCCeeEEEEeccCCCChH
Q 035917 331 VIISTRTG-TTYKAMLP-DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR-HPNLAPLLGYCVVEEEKLLIYKYMSSGTLY 407 (611)
Q Consensus 331 ~ig~G~~g-~Vy~~~~~-~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~-H~nIv~l~g~~~~~~~~~lv~ey~~~gsL~ 407 (611)
.+..|..| .||+.... ++..+++|+-... ...++.+|...|+.+. +--+-++++++.+++..++|||++++.++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 45556655 68998754 4677899986432 3456888999998884 333667888999999999999999998876
Q ss_pred HhhhcCCCCCCHHHHHHHHHHHHHHHHHHhh-------------------------------------------------
Q 035917 408 SLLQGNATELDWPTRFRIGLGAARGLAWLHH------------------------------------------------- 438 (611)
Q Consensus 408 ~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~------------------------------------------------- 438 (611)
+..... ......++.+++..|.-||.
T Consensus 109 ~~~~~~-----~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 183 (272)
T 4gkh_A 109 QVLEEY-----PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEM 183 (272)
T ss_dssp HHHHHC-----GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHH
T ss_pred ccccCC-----HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHH
Confidence 654311 11122344445555555552
Q ss_pred --c----CCCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 439 --G----CQPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 439 --~----~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
. ....++|+|+.+.||++++++.+-|.||+.+..
T Consensus 184 ~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 184 HKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 0 012379999999999999877777999987753
No 406
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.25 E-value=9.2e-08 Score=106.37 Aligned_cols=82 Identities=12% Similarity=0.223 Sum_probs=35.7
Q ss_pred CCCCCCEEEccCCCCCcc----CchhHHhcCCCCCEEECcCCcCc----ccCccCccCCcCcccccccccccCCCCChhh
Q 035917 118 FCKSMQRLDLSANDLSGN----IPAQICNWLPYLVLLDLSNNDLS----GPIPADLGNCTYLNTLILSNNKLSGPIPYQL 189 (611)
Q Consensus 118 ~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~----G~iP~~~~~l~~L~~L~L~~N~l~g~iP~~l 189 (611)
.+++|++|+|++|.+++. ++..+.. +++|+.|+|++|.++ +.++..+.++++|+.|+|++|.+.+ +|..+
T Consensus 162 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~-~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~ 239 (592)
T 3ogk_B 162 HCRKIKTLLMEESSFSEKDGKWLHELAQH-NTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFF 239 (592)
T ss_dssp HCTTCSEEECTTCEEECCCSHHHHHHHHH-CCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHH
T ss_pred hCCCCCEEECccccccCcchhHHHHHHhc-CCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHH
Confidence 344455555555444433 2222233 444555555554444 2233333444445555554444443 33444
Q ss_pred hcCCCccccccc
Q 035917 190 SNLGRLKKFSVA 201 (611)
Q Consensus 190 ~~l~~L~~L~l~ 201 (611)
.++++|+.|+++
T Consensus 240 ~~~~~L~~L~l~ 251 (592)
T 3ogk_B 240 KAAANLEEFCGG 251 (592)
T ss_dssp HHCTTCCEEEEC
T ss_pred hhhhHHHhhccc
Confidence 444444444443
No 407
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.06 E-value=1.3e-05 Score=83.66 Aligned_cols=140 Identities=11% Similarity=0.138 Sum_probs=88.9
Q ss_pred CCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCC--ccceeeEEEeC-CeeEEEEeccCCCC
Q 035917 329 ENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPN--LAPLLGYCVVE-EEKLLIYKYMSSGT 405 (611)
Q Consensus 329 ~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~n--Iv~l~g~~~~~-~~~~lv~ey~~~gs 405 (611)
.+.++.|....+|+... +|+.+++|..... ..+.+|+.++..+.... +.++++++... +..++||||+++.+
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 35688899999999886 5788999987543 25889999999886533 45667766654 56899999999765
Q ss_pred hHHh------------------hhcCCC----------------CCCHHHHH---------------------HHHHHHH
Q 035917 406 LYSL------------------LQGNAT----------------ELDWPTRF---------------------RIGLGAA 430 (611)
Q Consensus 406 L~~~------------------l~~~~~----------------~l~~~~~~---------------------~i~~~ia 430 (611)
+.+. |+.... .-.|...+ .....+.
T Consensus 121 l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 200 (362)
T 3ovc_A 121 LQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQALD 200 (362)
T ss_dssp TTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchHHHH
Confidence 5321 111100 00122111 1111111
Q ss_pred HHHHHHhhc-CCCCeeecCCCCCeEEeCCCCCeEEeeccccccc
Q 035917 431 RGLAWLHHG-CQPPFLHQNICSNVILVDEDFDARIMDFGLAKLM 473 (611)
Q Consensus 431 ~gL~yLH~~-~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~ 473 (611)
.-+.++... ..+.++|+|+.+.||+++++..+.|.||+.+..-
T Consensus 201 ~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~g 244 (362)
T 3ovc_A 201 ELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMFG 244 (362)
T ss_dssp HHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCcccccC
Confidence 112223211 1256899999999999987777889999988653
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.03 E-value=4.2e-06 Score=86.88 Aligned_cols=78 Identities=4% Similarity=-0.017 Sum_probs=55.0
Q ss_pred Cee-eecCCceEEEEEeC-------CCCEEEEEeccccc---h-hHHHHHHHHHHHhccC-C--CCccceeeEEEeC---
Q 035917 330 NVI-ISTRTGTTYKAMLP-------DGSVLAVKRLNTCK---L-GEKKFRNEMNRLGQLR-H--PNLAPLLGYCVVE--- 391 (611)
Q Consensus 330 ~~i-g~G~~g~Vy~~~~~-------~g~~vAvK~~~~~~---~-~~~~~~~Ev~~l~~l~-H--~nIv~l~g~~~~~--- 391 (611)
+.| +.|....+|+.... +++.+++|+..... . ....+.+|+.+++.+. + -.+.++++++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 77888999998764 26788999875432 1 2245788999888884 3 3466777777654
Q ss_pred CeeEEEEeccCCCChH
Q 035917 392 EEKLLIYKYMSSGTLY 407 (611)
Q Consensus 392 ~~~~lv~ey~~~gsL~ 407 (611)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3468999999987654
No 409
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.00 E-value=4.3e-07 Score=100.87 Aligned_cols=114 Identities=19% Similarity=0.203 Sum_probs=72.1
Q ss_pred cEEEEEecCCcccccCCccCc-CCCCCCEEEccCC-CCCcc-CchhHHhcCCCCCEEECcCCcCcccCccCcc----CCc
Q 035917 97 RILNLELREMKLSGKIPEPLK-FCKSMQRLDLSAN-DLSGN-IPAQICNWLPYLVLLDLSNNDLSGPIPADLG----NCT 169 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~-~l~~L~~L~Ls~N-~l~g~-ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~----~l~ 169 (611)
+++.|+|+++.+++..+..+. .+++|+.|+|++| .++.. ++..+.. +++|++|+|++|.+++..+..+. .++
T Consensus 106 ~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~-~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 106 WLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAAT-CRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHH-CTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHh-CCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 577788887777776666554 5778888888777 44433 4443334 77888888888877765544433 556
Q ss_pred CcccccccccccCCCCC-----hhhhcCCCccccccccc-ccCCCCCccCC
Q 035917 170 YLNTLILSNNKLSGPIP-----YQLSNLGRLKKFSVANN-DLTGTIPSSFK 214 (611)
Q Consensus 170 ~L~~L~L~~N~l~g~iP-----~~l~~l~~L~~L~l~~N-~l~g~ip~~~~ 214 (611)
+|+.|+|++|. +.++ ..+..+++|+.|++++| .+++ +|..+.
T Consensus 185 ~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~ 232 (594)
T 2p1m_B 185 SLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQ 232 (594)
T ss_dssp CCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHH
T ss_pred cCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHh
Confidence 78888887776 2332 12344677888888777 3333 554443
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.98 E-value=4.4e-07 Score=100.80 Aligned_cols=126 Identities=13% Similarity=0.065 Sum_probs=95.0
Q ss_pred cEEEEEecCCcccccCCccCc-CCCCCCEEEcc--C----CCCCc-----cCchhHHhcCCCCCEEECcCCcCcccCccC
Q 035917 97 RILNLELREMKLSGKIPEPLK-FCKSMQRLDLS--A----NDLSG-----NIPAQICNWLPYLVLLDLSNNDLSGPIPAD 164 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~-~l~~L~~L~Ls--~----N~l~g-----~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~ 164 (611)
++..|.+..+++++.....+. .+++|+.|+|+ + |++++ .++..+.. +++|+.|+|++ .+++..+..
T Consensus 373 ~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~-~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 373 KLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEH-CKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHH-CTTCCEEECCS-SCCHHHHHH
T ss_pred hHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhh-CCCccEEeecC-cccHHHHHH
Confidence 577788899999887766665 58999999999 4 66662 23333555 89999999977 777776667
Q ss_pred ccC-CcCcccccccccccCCCCChhh-hcCCCcccccccccccCCCCCc----cCCCCCcccCCCC
Q 035917 165 LGN-CTYLNTLILSNNKLSGPIPYQL-SNLGRLKKFSVANNDLTGTIPS----SFKGFDKADFDGN 224 (611)
Q Consensus 165 ~~~-l~~L~~L~L~~N~l~g~iP~~l-~~l~~L~~L~l~~N~l~g~ip~----~~~~~~~~~~~~n 224 (611)
++. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. .+.++..+.+.+|
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~ 516 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSC 516 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESS
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCC
Confidence 766 8999999999999987666555 7799999999999999654433 2344555555554
No 411
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=8e-06 Score=83.83 Aligned_cols=98 Identities=19% Similarity=0.183 Sum_probs=77.6
Q ss_pred CCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcc-cccccccccCCCCChhhhcCCCccc
Q 035917 119 CKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLN-TLILSNNKLSGPIPYQLSNLGRLKK 197 (611)
Q Consensus 119 l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~-~L~L~~N~l~g~iP~~l~~l~~L~~ 197 (611)
+++|+.|+|++|+++ .||...+..|++|+.|+|++| ++-.-+..+.+|++|+ .|+|.+ +++-.-+..|.++++|+.
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 789999999999998 788765555999999999998 6643345688999999 999988 676445578999999999
Q ss_pred ccccccccCCCCCccCCCCCcc
Q 035917 198 FSVANNDLTGTIPSSFKGFDKA 219 (611)
Q Consensus 198 L~l~~N~l~g~ip~~~~~~~~~ 219 (611)
+++++|+++..-+..|.++..+
T Consensus 302 l~l~~n~i~~I~~~aF~~~~~L 323 (329)
T 3sb4_A 302 VLATGDKITTLGDELFGNGVPS 323 (329)
T ss_dssp EEECSSCCCEECTTTTCTTCCC
T ss_pred EEeCCCccCccchhhhcCCcch
Confidence 9999998885555566655444
No 412
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.89 E-value=8.7e-06 Score=83.56 Aligned_cols=101 Identities=14% Similarity=0.128 Sum_probs=85.9
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCC-EEECcCCcCcccCccCccCCcCccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLV-LLDLSNNDLSGPIPADLGNCTYLNTLI 175 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~-~L~Ls~N~l~G~iP~~~~~l~~L~~L~ 175 (611)
.++.|+|++|++...-+..+..|.+|+.|+|++| ++ .|+...+..|++|+ .|+|++ +++-.-+..+.+|++|+.|+
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 6889999999998766677999999999999998 66 68776555599999 999999 77644457799999999999
Q ss_pred ccccccCCCCChhhhcCCCcccccc
Q 035917 176 LSNNKLSGPIPYQLSNLGRLKKFSV 200 (611)
Q Consensus 176 L~~N~l~g~iP~~l~~l~~L~~L~l 200 (611)
|+.|+++..-+..|.++++|+.+..
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred eCCCccCccchhhhcCCcchhhhcc
Confidence 9999999666678999999998753
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.89 E-value=2.7e-06 Score=79.88 Aligned_cols=97 Identities=12% Similarity=0.175 Sum_probs=75.4
Q ss_pred cCCccCcCCCCCCEEEccCC-CCCcc----CchhHHhcCCCCCEEECcCCcCccc----CccCccCCcCccccccccccc
Q 035917 111 KIPEPLKFCKSMQRLDLSAN-DLSGN----IPAQICNWLPYLVLLDLSNNDLSGP----IPADLGNCTYLNTLILSNNKL 181 (611)
Q Consensus 111 ~~p~~l~~l~~L~~L~Ls~N-~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~G~----iP~~~~~l~~L~~L~L~~N~l 181 (611)
.+...+...+.|+.|+|++| .+... +...+.. .+.|++|+|++|.++.. +...+...++|++|+|++|.+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~-~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i 105 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKT-NTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFI 105 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTT-CCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHh-CCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcC
Confidence 34445678899999999999 88743 3344444 68999999999999742 444556678999999999999
Q ss_pred CCC----CChhhhcCCCcccccc--cccccCCC
Q 035917 182 SGP----IPYQLSNLGRLKKFSV--ANNDLTGT 208 (611)
Q Consensus 182 ~g~----iP~~l~~l~~L~~L~l--~~N~l~g~ 208 (611)
+.. +...+...++|++|+| ++|.++..
T Consensus 106 ~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 106 SGSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp CHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred CHHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 853 4556778889999999 88988753
No 414
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89 E-value=5.6e-05 Score=77.43 Aligned_cols=137 Identities=18% Similarity=0.259 Sum_probs=79.8
Q ss_pred eeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccC-----CCCcccee-e--EEEeCCeeEEEEeccC
Q 035917 331 VIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR-----HPNLAPLL-G--YCVVEEEKLLIYKYMS 402 (611)
Q Consensus 331 ~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~-----H~nIv~l~-g--~~~~~~~~~lv~ey~~ 402 (611)
.|+.|..+.||+....+| .+++|+.... ..++..|+.++..+. .|.++... | +....+..+++|||++
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i~ 114 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP---EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWIE 114 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC---HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECCC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC---HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEeec
Confidence 455577889999987665 4899998653 234445555555543 34444311 1 2234667899999999
Q ss_pred CCChH--------------Hhhhc----C--C-------CCCCHHHHH-------------------------------H
Q 035917 403 SGTLY--------------SLLQG----N--A-------TELDWPTRF-------------------------------R 424 (611)
Q Consensus 403 ~gsL~--------------~~l~~----~--~-------~~l~~~~~~-------------------------------~ 424 (611)
|..+. ..+|. . . ..-.|.... .
T Consensus 115 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (346)
T 2q83_A 115 GRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEIDG 194 (346)
T ss_dssp CBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred CccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHHH
Confidence 86542 11111 0 0 012343211 0
Q ss_pred HHHHHHHHHHHHhh----------cCCCCeeecCCCCCeEEeCCCCCeEEeeccccc
Q 035917 425 IGLGAARGLAWLHH----------GCQPPFLHQNICSNVILVDEDFDARIMDFGLAK 471 (611)
Q Consensus 425 i~~~ia~gL~yLH~----------~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~ 471 (611)
+...+..++.+|+. .....++|+|+++.||+++.++.+.|.||+.+.
T Consensus 195 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 195 FIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11123345666652 125789999999999999877889999999765
No 415
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.76 E-value=9e-05 Score=78.01 Aligned_cols=73 Identities=15% Similarity=0.082 Sum_probs=48.9
Q ss_pred CeeeecCCceEEEEEeC-CCCEEEEEeccccc--------hhHHHHHHHHHHHhccCC--CCcc-ceeeEEEeCCeeEEE
Q 035917 330 NVIISTRTGTTYKAMLP-DGSVLAVKRLNTCK--------LGEKKFRNEMNRLGQLRH--PNLA-PLLGYCVVEEEKLLI 397 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~~-~g~~vAvK~~~~~~--------~~~~~~~~Ev~~l~~l~H--~nIv-~l~g~~~~~~~~~lv 397 (611)
+.||.|..+.||++... +++.|+||...... ...+++..|.++++.+.. +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 57899999999999854 46889999864321 122456789998887742 3433 44433 45567899
Q ss_pred EeccCCC
Q 035917 398 YKYMSSG 404 (611)
Q Consensus 398 ~ey~~~g 404 (611)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999763
No 416
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.72 E-value=1.9e-06 Score=89.86 Aligned_cols=110 Identities=16% Similarity=0.149 Sum_probs=77.6
Q ss_pred CcEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHh-cCCCCCEEECcC--CcCccc-----CccCc--
Q 035917 96 NRILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICN-WLPYLVLLDLSN--NDLSGP-----IPADL-- 165 (611)
Q Consensus 96 ~~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~-~l~~L~~L~Ls~--N~l~G~-----iP~~~-- 165 (611)
..+..|+|+++. .-.+++ +. +++|+.|+|+.+.++......+.. .+++|+.|+|+. |...|. +...+
T Consensus 172 P~L~~L~L~g~~-~l~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTN-NLSIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCB-TCBCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCC-Cceecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 368899998872 113444 43 889999999998887654445542 289999999964 332222 11122
Q ss_pred cCCcCcccccccccccCCCCChhhh---cCCCcccccccccccCCC
Q 035917 166 GNCTYLNTLILSNNKLSGPIPYQLS---NLGRLKKFSVANNDLTGT 208 (611)
Q Consensus 166 ~~l~~L~~L~L~~N~l~g~iP~~l~---~l~~L~~L~l~~N~l~g~ 208 (611)
..+++|++|+|++|.+++..+..+. .+++|++|+|+.|.+++.
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 3578999999999998865555554 478999999999999874
No 417
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.52 E-value=0.00062 Score=69.17 Aligned_cols=135 Identities=17% Similarity=0.184 Sum_probs=91.1
Q ss_pred CeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccC---CCCccceeeEEEeCCeeEEEEeccCCCCh
Q 035917 330 NVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR---HPNLAPLLGYCVVEEEKLLIYKYMSSGTL 406 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~---H~nIv~l~g~~~~~~~~~lv~ey~~~gsL 406 (611)
+.|+.|....+|+... ++..+++|+.... ....+..|.+.|+.|. ...+.++++++...+..++||||+++..+
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS--YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSKN 118 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCCC
Confidence 5688899999999886 4678889987543 3567889999998884 35678888888878889999999998764
Q ss_pred H--------H---hhhcCCC---------------------CCCHHHHH---HHHH----------------HHHHHH-H
Q 035917 407 Y--------S---LLQGNAT---------------------ELDWPTRF---RIGL----------------GAARGL-A 434 (611)
Q Consensus 407 ~--------~---~l~~~~~---------------------~l~~~~~~---~i~~----------------~ia~gL-~ 434 (611)
. + .||.... .-+|.... ++.. .+...+ .
T Consensus 119 ~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~~ 198 (312)
T 3jr1_A 119 KQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVAD 198 (312)
T ss_dssp CTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 2 1 1222110 12565432 1111 111112 2
Q ss_pred HHhh-cCCCCeeecCCCCCeEEeCCCCCeEEeecc
Q 035917 435 WLHH-GCQPPFLHQNICSNVILVDEDFDARIMDFG 468 (611)
Q Consensus 435 yLH~-~~~~~ivHrDlkp~NILld~~~~~kl~DFG 468 (611)
.|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 199 ~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 199 TLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 3321 2256799999999999999887 8888873
No 418
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.41 E-value=0.0032 Score=63.93 Aligned_cols=157 Identities=11% Similarity=0.049 Sum_probs=91.1
Q ss_pred cccHHHHHHhhhcCCC-----CCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCC--Ccccee
Q 035917 313 KVKLADLMAASNSFCS-----ENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHP--NLAPLL 385 (611)
Q Consensus 313 ~~~~~~l~~~t~~f~~-----~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~--nIv~l~ 385 (611)
.++.+++..+...|.. ...++ |....||+....+|+.+++|..+........+..|..++..+... .+.+++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g~~vp~~~ 88 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPV 88 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCeeccee
Confidence 4555555555555532 12455 788899998887788899999864433456777888888777422 234444
Q ss_pred eE-----EEeCCeeEEEEeccCCCChH-----H------h---hhc----C----CCCCCHHHH----HHHH--------
Q 035917 386 GY-----CVVEEEKLLIYKYMSSGTLY-----S------L---LQG----N----ATELDWPTR----FRIG-------- 426 (611)
Q Consensus 386 g~-----~~~~~~~~lv~ey~~~gsL~-----~------~---l~~----~----~~~l~~~~~----~~i~-------- 426 (611)
.. ....+..+++|||++|..+. . . +|. . ....++... ..+.
T Consensus 89 ~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 168 (328)
T 1zyl_A 89 AFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPS 168 (328)
T ss_dssp CBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCT
T ss_pred ecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCH
Confidence 32 22345668899999875431 0 1 111 0 011232211 0010
Q ss_pred -------HHHHHHHHHHhh----cCCCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 427 -------LGAARGLAWLHH----GCQPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 427 -------~~ia~gL~yLH~----~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
..+...++.+.. .....++|+|+++.||+++ + .+.|.||+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 169 GLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp TTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 011111222221 1245689999999999999 4 899999987753
No 419
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.33 E-value=0.0011 Score=66.29 Aligned_cols=74 Identities=20% Similarity=0.212 Sum_probs=53.6
Q ss_pred CCeeeecCCceEEEEEeCCCCEEEEEeccccc-hhHHHHHHHHHHHhccCCC---CccceeeEEEeCCeeEEEEeccCCC
Q 035917 329 ENVIISTRTGTTYKAMLPDGSVLAVKRLNTCK-LGEKKFRNEMNRLGQLRHP---NLAPLLGYCVVEEEKLLIYKYMSSG 404 (611)
Q Consensus 329 ~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~-~~~~~~~~Ev~~l~~l~H~---nIv~l~g~~~~~~~~~lv~ey~~~g 404 (611)
.+.+|.|..+.||+..+.||+.|.||+-.... .....|..|+..|+.|.-. -+.+++++ + ..++||||++++
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l~~~ 95 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECCCCC
T ss_pred EEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEeeccc
Confidence 45689999999999999999999999875432 2234688999999888422 23344443 2 347899999876
Q ss_pred Ch
Q 035917 405 TL 406 (611)
Q Consensus 405 sL 406 (611)
..
T Consensus 96 ~~ 97 (288)
T 3f7w_A 96 PP 97 (288)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 420
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.32 E-value=9e-05 Score=77.11 Aligned_cols=109 Identities=14% Similarity=0.175 Sum_probs=74.1
Q ss_pred cEEEEEecCCcc---------cccCCccCcCCCCCCEEEccCCC-CCccCchhHHhcCCCCCEEECcCCcCcccCccCcc
Q 035917 97 RILNLELREMKL---------SGKIPEPLKFCKSMQRLDLSAND-LSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLG 166 (611)
Q Consensus 97 ~v~~l~l~~~~l---------~g~~p~~l~~l~~L~~L~Ls~N~-l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~ 166 (611)
++..|.+.++.. .+.+++.+..+++|+.|+|++|. + .+|+ + . +++|+.|+|..|.++...-..+.
T Consensus 140 ~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l--~l~~-~-~-~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 140 HFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL--SIGK-K-P-RPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp TCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC--BCCS-C-B-CTTCSEEEEECSBCCHHHHHHHH
T ss_pred hhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc--eecc-c-c-CCCCcEEEEecCCCChHHHHHHH
Confidence 577777765532 12355556788999999999883 3 3454 3 3 78999999999887654444444
Q ss_pred --CCcCcccccccc--cccCCCC-----Chhh--hcCCCcccccccccccCCCCC
Q 035917 167 --NCTYLNTLILSN--NKLSGPI-----PYQL--SNLGRLKKFSVANNDLTGTIP 210 (611)
Q Consensus 167 --~l~~L~~L~L~~--N~l~g~i-----P~~l--~~l~~L~~L~l~~N~l~g~ip 210 (611)
.+++|+.|+|+. |...|.. ...+ ..+++|++|+|.+|.++...+
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~ 269 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVV 269 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHH
Confidence 789999999863 3332221 1122 357899999999998875443
No 421
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.26 E-value=0.0012 Score=69.88 Aligned_cols=76 Identities=11% Similarity=0.131 Sum_probs=45.6
Q ss_pred CCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCC-ccccCCCcccccccccccCCC---CCCcccchHHHHHHHH
Q 035917 441 QPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDES-SFVNGDLGEFGYIAPEYSSTM---VASLKGDVYGIGVVLL 516 (611)
Q Consensus 441 ~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~---~~t~ksDV~SfGvvl~ 516 (611)
...++|+|+++.|||++.++ ++|.||+.+..-...... ..... -...|.+|+..... ......++.+....+|
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGN--LILAFFAQDGHATQENDRKEYKQWILRTIEQTW 307 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHH--HHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHH--HHHHHHhcccccccccchHHHHHHHHHHHHHHH
Confidence 67899999999999998776 999999988753211000 00000 01346666654321 1122345557777777
Q ss_pred HHh
Q 035917 517 ELA 519 (611)
Q Consensus 517 ell 519 (611)
+.+
T Consensus 308 ~~y 310 (420)
T 2pyw_A 308 NLF 310 (420)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 422
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.12 E-value=0.0016 Score=66.05 Aligned_cols=156 Identities=8% Similarity=0.071 Sum_probs=87.4
Q ss_pred ccHHHHHHhhhcCCCC-----CeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCC--ccceee
Q 035917 314 VKLADLMAASNSFCSE-----NVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPN--LAPLLG 386 (611)
Q Consensus 314 ~~~~~l~~~t~~f~~~-----~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~n--Iv~l~g 386 (611)
++.+++......|... +.|+.|....+|+....+| .+++|..... ...+++..|+.++..+.... +.+++.
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g~~vP~~~~ 84 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKGLSCPLPLP 84 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC----CCHHHHHHHHHHHHHHTTCCCCCBCC
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCCCCCCcccC
Confidence 5556666666666553 2355677789999987666 5788988652 12234667777777664212 222321
Q ss_pred ------EEEeCCeeEEEEeccCCCChHH--------------hhhcC--C--CC-------CCHHHHHHH----------
Q 035917 387 ------YCVVEEEKLLIYKYMSSGTLYS--------------LLQGN--A--TE-------LDWPTRFRI---------- 425 (611)
Q Consensus 387 ------~~~~~~~~~lv~ey~~~gsL~~--------------~l~~~--~--~~-------l~~~~~~~i---------- 425 (611)
+....+..+++|+|++|..+.. .+|.. . .+ ..|.....-
T Consensus 85 ~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 164 (322)
T 2ppq_A 85 RKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEK 164 (322)
T ss_dssp BTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTST
T ss_pred CCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhh
Confidence 1123456789999998765311 01110 0 01 124321110
Q ss_pred --HHHHHHHHHHHhhc----CCCCeeecCCCCCeEEeCCCCCeEEeeccccc
Q 035917 426 --GLGAARGLAWLHHG----CQPPFLHQNICSNVILVDEDFDARIMDFGLAK 471 (611)
Q Consensus 426 --~~~ia~gL~yLH~~----~~~~ivHrDlkp~NILld~~~~~kl~DFGla~ 471 (611)
...+.+.+++++.. ....++|+|+.+.|||++++....|.||+.+.
T Consensus 165 ~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 165 GLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp THHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 11133445555421 13569999999999999877656899998765
No 423
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.10 E-value=0.0012 Score=66.50 Aligned_cols=136 Identities=13% Similarity=0.087 Sum_probs=74.6
Q ss_pred CCeeeecCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCc-cceeeEEEeCCeeEEEEecc-CCCCh
Q 035917 329 ENVIISTRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNL-APLLGYCVVEEEKLLIYKYM-SSGTL 406 (611)
Q Consensus 329 ~~~ig~G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nI-v~l~g~~~~~~~~~lv~ey~-~~gsL 406 (611)
.+.|+.|....+|+. +.+++|+.........+..+|+.+++.+....+ .+++++ +.+.-++++||+ ++.++
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 567888999999998 558888875421111123568887777743333 344443 344467899999 55444
Q ss_pred HH------------------hhhcCCCC----CCH-HHHHHHHHH--------------HHHHHH----HHh-hcCCCCe
Q 035917 407 YS------------------LLQGNATE----LDW-PTRFRIGLG--------------AARGLA----WLH-HGCQPPF 444 (611)
Q Consensus 407 ~~------------------~l~~~~~~----l~~-~~~~~i~~~--------------ia~gL~----yLH-~~~~~~i 444 (611)
.. -+|..... .+. .....+... +.+.+. .+. ......+
T Consensus 96 ~~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~l 175 (301)
T 3dxq_A 96 SPEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPLPLAA 175 (301)
T ss_dssp CHHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCCCCEE
T ss_pred CHhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCCCcee
Confidence 21 01211111 111 111111110 111111 111 1123458
Q ss_pred eecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 445 LHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 445 vHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
+|+|+.+.||+ ..++.+.+.||..+..
T Consensus 176 ~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 176 CHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp ECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eccCCCcCCEE-ECCCCEEEEecccccC
Confidence 99999999999 5566789999988764
No 424
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.88 E-value=0.0031 Score=64.34 Aligned_cols=138 Identities=13% Similarity=0.094 Sum_probs=71.8
Q ss_pred eeeecCCce-EEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCC--CCccceeeEEEeCCeeEEEEeccCCCChH
Q 035917 331 VIISTRTGT-TYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRH--PNLAPLLGYCVVEEEKLLIYKYMSSGTLY 407 (611)
Q Consensus 331 ~ig~G~~g~-Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H--~nIv~l~g~~~~~~~~~lv~ey~~~gsL~ 407 (611)
.|+.|.... +|+....+|+.+++|....... .++..|+.++..+.. -.+.+++.+.... -+++||++.+..+.
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~--~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l~ 100 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG--GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALFT 100 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT--CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBHH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC--ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcchH
Confidence 354454443 6677655577788887643220 234566777666642 2344566553322 37899999776664
Q ss_pred Hhhhc---------------------CC----CCCCHHHHH-------H-------------HHHHHHHHHHHHh---hc
Q 035917 408 SLLQG---------------------NA----TELDWPTRF-------R-------------IGLGAARGLAWLH---HG 439 (611)
Q Consensus 408 ~~l~~---------------------~~----~~l~~~~~~-------~-------------i~~~ia~gL~yLH---~~ 439 (611)
+++.+ .. ..++..... . ....+...++.+. ..
T Consensus 101 ~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~~ 180 (333)
T 3csv_A 101 EVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQLE 180 (333)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHCC
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhccc
Confidence 43321 10 011111100 0 0001111222221 11
Q ss_pred CCCCeeecCCCCCeEEeCCC----CCeEEeecccccc
Q 035917 440 CQPPFLHQNICSNVILVDED----FDARIMDFGLAKL 472 (611)
Q Consensus 440 ~~~~ivHrDlkp~NILld~~----~~~kl~DFGla~~ 472 (611)
....++|+|+.+.||+++.+ ..+.|.||+.+..
T Consensus 181 ~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 181 GDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp SCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 24579999999999999874 6789999998864
No 425
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.87 E-value=0.001 Score=58.32 Aligned_cols=55 Identities=22% Similarity=0.332 Sum_probs=28.3
Q ss_pred EEEecCCccc-ccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcC
Q 035917 100 NLELREMKLS-GKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDL 157 (611)
Q Consensus 100 ~l~l~~~~l~-g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l 157 (611)
.++.++++|+ ..+|..+ ..+|+.|+|++|+|+ .||...+..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCe
Confidence 3455555554 3444322 234566666666666 35444333355666666666654
No 426
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.85 E-value=0.0017 Score=68.51 Aligned_cols=79 Identities=15% Similarity=0.230 Sum_probs=55.7
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLIL 176 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L 176 (611)
.++.+.|++ ++.-.-+..+..|.+|+.++|++|+++ .||...+. +++|+.+.|..| ++-.-...+.+|++|+.++|
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 366677765 555444566888888999999888888 67777666 678888888744 55333345677788888887
Q ss_pred ccc
Q 035917 177 SNN 179 (611)
Q Consensus 177 ~~N 179 (611)
..|
T Consensus 234 ~~~ 236 (401)
T 4fdw_A 234 PEN 236 (401)
T ss_dssp CTT
T ss_pred CCC
Confidence 764
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.82 E-value=0.0012 Score=57.91 Aligned_cols=55 Identities=24% Similarity=0.239 Sum_probs=30.4
Q ss_pred EEEccCCCCC-ccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCccccccccccc
Q 035917 124 RLDLSANDLS-GNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNNKL 181 (611)
Q Consensus 124 ~L~Ls~N~l~-g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l 181 (611)
.++.++++|+ ..+|..+ .++|+.|+|++|+|+..-+..+..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l---p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF---PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC---CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCC---CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5666666665 3455443 34566666666666633233345555566655555544
No 428
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.82 E-value=0.0015 Score=68.94 Aligned_cols=102 Identities=16% Similarity=0.221 Sum_probs=51.6
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcc----cCc-cCccCCcCc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSG----PIP-ADLGNCTYL 171 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G----~iP-~~~~~l~~L 171 (611)
.+..|+|+++ +.-.-...+.. ..|+.+.| .|+++ .|+...+..|++|+.++|++|.+.. .|+ ..+.+|++|
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~-~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT-NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC-EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc-EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 3455555542 33222223434 56666666 34444 3443333336666666666665541 122 345566666
Q ss_pred ccccccccccCCCCChhhhcCCCccccccccc
Q 035917 172 NTLILSNNKLSGPIPYQLSNLGRLKKFSVANN 203 (611)
Q Consensus 172 ~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~~N 203 (611)
+.++|. |.++-.-...|.++.+|+.+.|..|
T Consensus 303 ~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 303 ARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp CEECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred CeEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 666666 3344222344566666666666443
No 429
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.72 E-value=0.0052 Score=64.07 Aligned_cols=139 Identities=17% Similarity=0.152 Sum_probs=82.4
Q ss_pred CeeeecCCceEEEEEeC--------CCCEEEEEeccccchhHHHHHHHHHHHhccC-CCCccceeeEEEeCCeeEEEEec
Q 035917 330 NVIISTRTGTTYKAMLP--------DGSVLAVKRLNTCKLGEKKFRNEMNRLGQLR-HPNLAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~~--------~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~-H~nIv~l~g~~~~~~~~~lv~ey 400 (611)
+.+..|-...+|+...+ +++.|++|+..........+.+|.++++.+. +.-..++++++. + .+||||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~--g~v~e~ 131 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFP--E--GRLEQY 131 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T--EEEEEC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C--ccEEEE
Confidence 45666888889999875 3578999986443233456678999998884 322345665543 3 299999
Q ss_pred cCCCChHH--------------h---hhcCC----CCCC--HHHHHHHHHHHHH-------------------HHHHHh-
Q 035917 401 MSSGTLYS--------------L---LQGNA----TELD--WPTRFRIGLGAAR-------------------GLAWLH- 437 (611)
Q Consensus 401 ~~~gsL~~--------------~---l~~~~----~~l~--~~~~~~i~~~ia~-------------------gL~yLH- 437 (611)
++|..|.. . ||... .... |.++.++..++.. .+.+|.
T Consensus 132 i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~ 211 (379)
T 3feg_A 132 IPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRK 211 (379)
T ss_dssp CSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHH
T ss_pred ecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHH
Confidence 98765531 0 12211 1122 4455555443321 233332
Q ss_pred ---h-cCCCCeeecCCCCCeEEeCCC----CCeEEeecccccc
Q 035917 438 ---H-GCQPPFLHQNICSNVILVDED----FDARIMDFGLAKL 472 (611)
Q Consensus 438 ---~-~~~~~ivHrDlkp~NILld~~----~~~kl~DFGla~~ 472 (611)
. .....++|+|+.+.||+++.+ +.+.+.||..+..
T Consensus 212 ~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 212 LLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 123468999999999999876 6899999988764
No 430
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.70 E-value=0.0029 Score=67.32 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=49.0
Q ss_pred CeeeecCCceEEEEEeCC--------CCEEEEEeccccchhHHHHHHHHHHHhccCCCCc-cceeeEEEeCCeeEEEEec
Q 035917 330 NVIISTRTGTTYKAMLPD--------GSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNL-APLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nI-v~l~g~~~~~~~~~lv~ey 400 (611)
+.|+.|-...+|+...++ ++.+++|+.... ...+.+.+|..++..+...++ .++++.+. + .+||||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~--g~v~e~ 153 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHLGPKLYGIFS--G--GRLEEY 153 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T--EEEECC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C--CEEEEE
Confidence 457778889999998753 578999988432 122456689999888853334 55666543 2 389999
Q ss_pred cCCCCh
Q 035917 401 MSSGTL 406 (611)
Q Consensus 401 ~~~gsL 406 (611)
+++.+|
T Consensus 154 l~G~~l 159 (429)
T 1nw1_A 154 IPSRPL 159 (429)
T ss_dssp CCEEEC
T ss_pred eCCccc
Confidence 986443
No 431
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.63 E-value=0.00043 Score=63.92 Aligned_cols=83 Identities=8% Similarity=0.104 Sum_probs=48.7
Q ss_pred cEEEEEecCCcccccCCccCcCCCCCCEEEccCCC-CCccCchhHHh---cCCCCCEEECcCCc-CcccCccCccCCcCc
Q 035917 97 RILNLELREMKLSGKIPEPLKFCKSMQRLDLSAND-LSGNIPAQICN---WLPYLVLLDLSNND-LSGPIPADLGNCTYL 171 (611)
Q Consensus 97 ~v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~-l~g~ip~~~~~---~l~~L~~L~Ls~N~-l~G~iP~~~~~l~~L 171 (611)
+++.|||++..++..=-..+..|++|+.|+|+++. ++..-=..+.. .+++|+.|||+++. +|..==..+.++++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 57888888777654322346677788888888764 55432223333 01357777777753 542211235566777
Q ss_pred cccccccc
Q 035917 172 NTLILSNN 179 (611)
Q Consensus 172 ~~L~L~~N 179 (611)
+.|+|++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 77777665
No 432
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.48 E-value=0.0043 Score=64.36 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=43.6
Q ss_pred CeeeecCCceEEEEEeCC---------CCEEEEEeccccchhHHHHHHHHHHHhccCCCCc-cceeeEEEeCCeeEEEEe
Q 035917 330 NVIISTRTGTTYKAMLPD---------GSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNL-APLLGYCVVEEEKLLIYK 399 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~~~---------g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nI-v~l~g~~~~~~~~~lv~e 399 (611)
..++.|....+|+....+ ++.+++|+.........+...|..+++.+...++ .++++.. . -++|||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~e 114 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIEE 114 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEEE
Confidence 356678888999998754 2688888875432111123678888887753333 3565443 2 368999
Q ss_pred ccCCCCh
Q 035917 400 YMSSGTL 406 (611)
Q Consensus 400 y~~~gsL 406 (611)
|++|..+
T Consensus 115 ~i~G~~l 121 (369)
T 3c5i_A 115 WLYGDPL 121 (369)
T ss_dssp CCCSEEC
T ss_pred EecCCcC
Confidence 9987543
No 433
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.44 E-value=0.0013 Score=60.56 Aligned_cols=84 Identities=11% Similarity=0.081 Sum_probs=62.3
Q ss_pred CCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCc-CcccCccCccCC----cCcccccccccc-cCCCCChhhhcCC
Q 035917 120 KSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNND-LSGPIPADLGNC----TYLNTLILSNNK-LSGPIPYQLSNLG 193 (611)
Q Consensus 120 ~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~-l~G~iP~~~~~l----~~L~~L~L~~N~-l~g~iP~~l~~l~ 193 (611)
-.|+.||||++.++..=-..+.. +++|+.|+|+++. ++..-=..++.+ ++|+.|+|+++. +|..==..+..++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~-~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEG-LQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTT-CSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCT
T ss_pred ceEeEEeCcCCCccHHHHHHhcC-CCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCC
Confidence 47999999999987543344555 9999999999985 664322334543 479999999974 7643224578899
Q ss_pred Ccccccccccc
Q 035917 194 RLKKFSVANND 204 (611)
Q Consensus 194 ~L~~L~l~~N~ 204 (611)
+|+.|+|++..
T Consensus 140 ~L~~L~L~~c~ 150 (176)
T 3e4g_A 140 NLKYLFLSDLP 150 (176)
T ss_dssp TCCEEEEESCT
T ss_pred CCCEEECCCCC
Confidence 99999999864
No 434
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.24 E-value=0.0011 Score=62.39 Aligned_cols=42 Identities=21% Similarity=0.301 Sum_probs=18.2
Q ss_pred CcCCCCCCEEEccCCCCCcc----CchhHHhcCCCCCEEECcCCcCc
Q 035917 116 LKFCKSMQRLDLSANDLSGN----IPAQICNWLPYLVLLDLSNNDLS 158 (611)
Q Consensus 116 l~~l~~L~~L~Ls~N~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~ 158 (611)
|..-+.|+.|+|++|.+... |-..+.. -+.|+.|+|++|.++
T Consensus 66 L~~N~~L~~L~L~~n~igd~ga~alA~aL~~-N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 66 ACNSKHIEKFSLANTAISDSEARGLIELIET-SPSLRVLNVESNFLT 111 (197)
T ss_dssp HTTCSCCCEEECTTSCCBHHHHTTHHHHHHH-CSSCCEEECCSSBCC
T ss_pred HhhCCCcCEEEccCCCCChHHHHHHHHHHhc-CCccCeEecCCCcCC
Confidence 33344555555555555421 1222222 344555555555544
No 435
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.17 E-value=0.041 Score=52.14 Aligned_cols=101 Identities=12% Similarity=0.089 Sum_probs=66.0
Q ss_pred CChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEEeCCCCCeEEeecccccccCCCCCCcccc
Q 035917 404 GTLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVILVDEDFDARIMDFGLAKLMTSSDESSFVN 483 (611)
Q Consensus 404 gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~~~~~~~~~~~~ 483 (611)
-+|.++|...+.++++.+++.++.|.+++|.-+-.. ..+ ..+=+-|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~-~~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~------------ 97 (229)
T 2yle_A 33 LSLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARR-RQP-RHRVRSAAQIRVWRDGAVTLAP-AADD------------ 97 (229)
T ss_dssp EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-TCC-CCCCCSGGGEEEETTSCEEECC-C---------------
T ss_pred ccHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhc-ccC-CceecCCcceEEecCCceeccc-cccc------------
Confidence 379999987777999999999999999988766210 011 1222356889999999887663 1110
Q ss_pred CCCcccccccccccCCCCCCcccchHHHHHHHHHHhCCC
Q 035917 484 GDLGEFGYIAPEYSSTMVASLKGDVYGIGVVLLELAGFK 522 (611)
Q Consensus 484 ~~~gt~~y~aPE~~~~~~~t~ksDV~SfGvvl~ell~~~ 522 (611)
.....+.|||... ...+.+.=|||+|+++|.-+...
T Consensus 98 --~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDyg 133 (229)
T 2yle_A 98 --AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYG 133 (229)
T ss_dssp -----------CCSS-SSSCHHHHHHHHHHHHHHHHTTT
T ss_pred --ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcC
Confidence 0123466888764 34578889999999999988443
No 436
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.14 E-value=0.013 Score=62.57 Aligned_cols=73 Identities=12% Similarity=0.002 Sum_probs=46.5
Q ss_pred CeeeecCCceEEEEEeCC-CCEEEEEeccccchhHHHHHHHHHHHhccCCCCc-cceeeEEEeCCeeEEEEeccCCCCh
Q 035917 330 NVIISTRTGTTYKAMLPD-GSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNL-APLLGYCVVEEEKLLIYKYMSSGTL 406 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~~~-g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nI-v~l~g~~~~~~~~~lv~ey~~~gsL 406 (611)
+.|+.|-...+|+....+ +..+++|+........-+-.+|..++..+...++ .++++++ .+ .+||||+++.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~gl~P~ll~~~--~~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKNIAKKIYVFF--TN--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSSSBCCEEEEE--TT--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcCCCCCEEEEe--CC--eEEEEeeCCccC
Confidence 457778889999998865 5788888874321111112578888888865555 4566665 23 259999987544
No 437
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.02 E-value=0.022 Score=58.24 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=28.0
Q ss_pred CCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 441 QPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 441 ~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
...++|+|+.+.||++++++.+.|.||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 35699999999999999878899999987764
No 438
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.18 E-value=0.0062 Score=57.17 Aligned_cols=87 Identities=14% Similarity=0.173 Sum_probs=61.7
Q ss_pred CcCCCCCCEEEccCC-CCCcc----CchhHHhcCCCCCEEECcCCcCccc----CccCccCCcCcccccccccccCCC--
Q 035917 116 LKFCKSMQRLDLSAN-DLSGN----IPAQICNWLPYLVLLDLSNNDLSGP----IPADLGNCTYLNTLILSNNKLSGP-- 184 (611)
Q Consensus 116 l~~l~~L~~L~Ls~N-~l~g~----ip~~~~~~l~~L~~L~Ls~N~l~G~----iP~~~~~l~~L~~L~L~~N~l~g~-- 184 (611)
+.+-+.|+.|+|++| .+... |-..+.. -+.|+.|+|++|.+... |-..+..-+.|+.|+|+.|.++..
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~-N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACN-SKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTT-CSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhh-CCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 455678999999986 77532 3334444 57899999999999732 333344568899999999999743
Q ss_pred --CChhhhcCCCccccccccc
Q 035917 185 --IPYQLSNLGRLKKFSVANN 203 (611)
Q Consensus 185 --iP~~l~~l~~L~~L~l~~N 203 (611)
|-..|..-+.|+.|+|++|
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHhhCCceeEEECCCC
Confidence 2223445567999999865
No 439
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.62 E-value=0.074 Score=55.63 Aligned_cols=139 Identities=17% Similarity=0.162 Sum_probs=80.6
Q ss_pred CeeeecCCceEEEEEeCC--------CCEEEEEeccccc------------hhHH-------HHHHHHHHHhccC-CCCc
Q 035917 330 NVIISTRTGTTYKAMLPD--------GSVLAVKRLNTCK------------LGEK-------KFRNEMNRLGQLR-HPNL 381 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~~~--------g~~vAvK~~~~~~------------~~~~-------~~~~Ev~~l~~l~-H~nI 381 (611)
+.|..|-...+|+...++ ++.|.+++..... .+++ ....|..+++.+. |.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 356667788899988754 3678888863321 1111 2235888888885 3334
Q ss_pred cceeeEEEeCCeeEEEEeccCCCChHH--h---------------hhcCC----CCCC--HHHHHHHHHHHH--------
Q 035917 382 APLLGYCVVEEEKLLIYKYMSSGTLYS--L---------------LQGNA----TELD--WPTRFRIGLGAA-------- 430 (611)
Q Consensus 382 v~l~g~~~~~~~~~lv~ey~~~gsL~~--~---------------l~~~~----~~l~--~~~~~~i~~~ia-------- 430 (611)
.++++++. +. +|+||+++-+|.. + +|... .... |....++..++.
T Consensus 138 Pkl~~~~~--~G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFP--QG--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEET--TE--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeC--CC--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 56666653 22 8999998755421 1 12211 1122 234433433221
Q ss_pred --------------HHHHH----Hhh-cCCCCeeecCCCCCeEEeCCC------CCeEEeecccccc
Q 035917 431 --------------RGLAW----LHH-GCQPPFLHQNICSNVILVDED------FDARIMDFGLAKL 472 (611)
Q Consensus 431 --------------~gL~y----LH~-~~~~~ivHrDlkp~NILld~~------~~~kl~DFGla~~ 472 (611)
.-+.. |.. .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 11222 221 123468999999999999876 7899999987753
No 440
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.48 E-value=0.23 Score=52.33 Aligned_cols=138 Identities=12% Similarity=0.137 Sum_probs=81.8
Q ss_pred CeeeecCCceEEEEEeCC--------CCEEEEEeccccchhHHHHHHHHHHHhccCCCC-ccceeeEEEeCCeeEEEEec
Q 035917 330 NVIISTRTGTTYKAMLPD--------GSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPN-LAPLLGYCVVEEEKLLIYKY 400 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~~~--------g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~n-Iv~l~g~~~~~~~~~lv~ey 400 (611)
+.+..|-...+|+...++ ++.+++|+........-+..+|..+++.+.-.+ ..++++.+ . -++||||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~ef 151 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEEF 151 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEEC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEEE
Confidence 356678888999998763 578999987442211112357888887774223 34555433 2 3789999
Q ss_pred cCCCChHH--------------h---hhc------------CCCCCCHHHHHHHHHHH-------------------HHH
Q 035917 401 MSSGTLYS--------------L---LQG------------NATELDWPTRFRIGLGA-------------------ARG 432 (611)
Q Consensus 401 ~~~gsL~~--------------~---l~~------------~~~~l~~~~~~~i~~~i-------------------a~g 432 (611)
++|..|.. . +|. ...+.-|.++.++..++ ...
T Consensus 152 I~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~e 231 (424)
T 3mes_A 152 IDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILEE 231 (424)
T ss_dssp CCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHHH
T ss_pred eCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHHH
Confidence 99865421 0 010 01112244443333221 222
Q ss_pred HHHHhh---------------------cCCCCeeecCCCCCeEEeCCCCCeEEeecccccc
Q 035917 433 LAWLHH---------------------GCQPPFLHQNICSNVILVDEDFDARIMDFGLAKL 472 (611)
Q Consensus 433 L~yLH~---------------------~~~~~ivHrDlkp~NILld~~~~~kl~DFGla~~ 472 (611)
+.+|.. .....++|+|+.+.||+ +.++.+.+.||..+..
T Consensus 232 ~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 232 IDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 333321 11345899999999999 7788999999988764
No 441
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=93.32 E-value=0.17 Score=52.13 Aligned_cols=81 Identities=22% Similarity=0.425 Sum_probs=37.7
Q ss_pred CcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCccCccCCcCcccccccccccCCCCC-hhhhcCCC
Q 035917 116 LKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIPADLGNCTYLNTLILSNNKLSGPIP-YQLSNLGR 194 (611)
Q Consensus 116 l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP~~~~~l~~L~~L~L~~N~l~g~iP-~~l~~l~~ 194 (611)
+..+..|+.+.+..+ +. .|+...+..|++|+.+++.+|.++-.-+..+.+|++|+.++|..| ++ .|+ ..|.++.+
T Consensus 259 F~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~ 334 (379)
T 4h09_A 259 LQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKA 334 (379)
T ss_dssp TTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTT
T ss_pred cceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCC
Confidence 344455555555332 22 233333333556666666555554222234555566666655433 33 222 34555555
Q ss_pred cccccc
Q 035917 195 LKKFSV 200 (611)
Q Consensus 195 L~~L~l 200 (611)
|+.+.+
T Consensus 335 L~~i~i 340 (379)
T 4h09_A 335 LSTISY 340 (379)
T ss_dssp CCCCCC
T ss_pred CCEEEE
Confidence 555544
No 442
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=92.30 E-value=0.12 Score=53.86 Aligned_cols=101 Identities=14% Similarity=0.329 Sum_probs=71.9
Q ss_pred EEEEEecCCcccccCCccCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCc-cCccCCcCcccccc
Q 035917 98 ILNLELREMKLSGKIPEPLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIP-ADLGNCTYLNTLIL 176 (611)
Q Consensus 98 v~~l~l~~~~l~g~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP-~~~~~l~~L~~L~L 176 (611)
++.+.++++-. -.-...+.++..|+.+.+. +.++ .|+...+..|++|+.++|..| ++ .|. ..+.+|++|+.+.|
T Consensus 267 L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 267 LASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAI 341 (394)
T ss_dssp CCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEE
T ss_pred ccEEecccccc-eecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEE
Confidence 44555554322 1223457789999999996 4555 577665555999999999865 54 343 46889999999999
Q ss_pred cccccCCCCC-hhhhcCCCccccccccccc
Q 035917 177 SNNKLSGPIP-YQLSNLGRLKKFSVANNDL 205 (611)
Q Consensus 177 ~~N~l~g~iP-~~l~~l~~L~~L~l~~N~l 205 (611)
..| ++ .|+ ..|.++.+|+.+++.+|..
T Consensus 342 p~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 342 PSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp CTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred Ccc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 755 55 444 5689999999999988754
No 443
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=92.06 E-value=0.2 Score=52.12 Aligned_cols=84 Identities=11% Similarity=0.305 Sum_probs=62.1
Q ss_pred cCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCc-cCccCCcCcccccccccccCCCCChhhhcCC
Q 035917 115 PLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIP-ADLGNCTYLNTLILSNNKLSGPIPYQLSNLG 193 (611)
Q Consensus 115 ~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP-~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~ 193 (611)
.+..+..|+.+.+..+.. .|....+..+++|+.++++ +.++ .|+ ..+.+|++|+.++|..| ++-.-...|.++.
T Consensus 260 aF~~c~~L~~i~lp~~~~--~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~ 334 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVV--SIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCE 334 (394)
T ss_dssp TTTTCSSCCEEECCTTCC--EECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCT
T ss_pred eeeecccccEEecccccc--eecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCC
Confidence 577889999999976654 3554444448999999997 4455 454 45788999999999865 5422245688999
Q ss_pred Cccccccccc
Q 035917 194 RLKKFSVANN 203 (611)
Q Consensus 194 ~L~~L~l~~N 203 (611)
+|+.+.+..|
T Consensus 335 ~L~~i~ip~s 344 (394)
T 4gt6_A 335 QLERIAIPSS 344 (394)
T ss_dssp TCCEEEECTT
T ss_pred CCCEEEECcc
Confidence 9999998654
No 444
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=91.42 E-value=0.17 Score=52.62 Aligned_cols=55 Identities=15% Similarity=0.127 Sum_probs=21.9
Q ss_pred CCCCCEEECcCCcCcccCc-cCccCCcCcccccccccccCCCCChhhhcCCCccccccc
Q 035917 144 LPYLVLLDLSNNDLSGPIP-ADLGNCTYLNTLILSNNKLSGPIPYQLSNLGRLKKFSVA 201 (611)
Q Consensus 144 l~~L~~L~Ls~N~l~G~iP-~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~~L~~L~l~ 201 (611)
+.+|+.+.+..| +. .|+ ..+.+|++|+.++|..+ ++-.-...|.++.+|+.+++.
T Consensus 296 ~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp 351 (394)
T 4fs7_A 296 CSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFP 351 (394)
T ss_dssp CTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEEC
Confidence 444555544433 22 222 22444445554444322 221112234444444444443
No 445
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=90.59 E-value=0.19 Score=52.17 Aligned_cols=84 Identities=19% Similarity=0.212 Sum_probs=63.6
Q ss_pred cCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCc-cCccCCcCcccccccccccCCCCChhhhcCC
Q 035917 115 PLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIP-ADLGNCTYLNTLILSNNKLSGPIPYQLSNLG 193 (611)
Q Consensus 115 ~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP-~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~ 193 (611)
.+..+.+|+.+.+..+ ++ .|+...+..|++|+.++|.++ ++ .|+ ..+.+|++|+.++|..| ++-.-...|.++.
T Consensus 292 ~F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred cccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 4678899999999765 55 566554444899999999855 55 454 46889999999999877 5523345689999
Q ss_pred Cccccccccc
Q 035917 194 RLKKFSVANN 203 (611)
Q Consensus 194 ~L~~L~l~~N 203 (611)
+|+.+++..|
T Consensus 367 ~L~~i~lp~~ 376 (394)
T 4fs7_A 367 NLKKVELPKR 376 (394)
T ss_dssp TCCEEEEEGG
T ss_pred CCCEEEECCC
Confidence 9999998655
No 446
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.94 E-value=0.43 Score=49.81 Aligned_cols=29 Identities=24% Similarity=0.416 Sum_probs=24.8
Q ss_pred eeecCCCCCeEEe------CCCCCeEEeecccccc
Q 035917 444 FLHQNICSNVILV------DEDFDARIMDFGLAKL 472 (611)
Q Consensus 444 ivHrDlkp~NILl------d~~~~~kl~DFGla~~ 472 (611)
++|+|+.+.|||+ +++..++++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567899999988764
No 447
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=88.69 E-value=0.7 Score=47.40 Aligned_cols=85 Identities=13% Similarity=0.256 Sum_probs=52.7
Q ss_pred cCcCCCCCCEEEccCCCCCccCchhHHhcCCCCCEEECcCCcCcccCc-cCccCCcCcccccccccccCCCCChhhhcCC
Q 035917 115 PLKFCKSMQRLDLSANDLSGNIPAQICNWLPYLVLLDLSNNDLSGPIP-ADLGNCTYLNTLILSNNKLSGPIPYQLSNLG 193 (611)
Q Consensus 115 ~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~l~~L~~L~Ls~N~l~G~iP-~~~~~l~~L~~L~L~~N~l~g~iP~~l~~l~ 193 (611)
.+..+..|+.+.+..+ ++ .|....+..+.+|+.+++..+ +. .|+ ..+.+|++|+.+++.+|.++-.-+..|.++.
T Consensus 235 ~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~ 310 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCV 310 (379)
T ss_dssp TTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCT
T ss_pred cccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ce-eccccccccccccccccccccccceehhhhhcCCC
Confidence 3455666676666554 33 344433333677777777654 33 333 3467788888888877777633345677888
Q ss_pred Cccccccccc
Q 035917 194 RLKKFSVANN 203 (611)
Q Consensus 194 ~L~~L~l~~N 203 (611)
+|+.+.|..|
T Consensus 311 ~L~~i~lp~~ 320 (379)
T 4h09_A 311 KLSSVTLPTA 320 (379)
T ss_dssp TCCEEECCTT
T ss_pred CCCEEEcCcc
Confidence 8888877543
No 448
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=86.08 E-value=0.97 Score=30.89 Aligned_cols=19 Identities=11% Similarity=0.051 Sum_probs=8.3
Q ss_pred hhhhhhhHHHHHHHHHHHH
Q 035917 245 AIIIAAGIFGAAASMLLAF 263 (611)
Q Consensus 245 ~~ii~~~v~~~~~~~l~~~ 263 (611)
..+++.++++++++++++.
T Consensus 11 ~~IA~gVVgGv~~~~ii~~ 29 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVAL 29 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHH
T ss_pred ceEEeehhHHHHHHHHHHH
Confidence 3344444444444444443
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=85.36 E-value=1.4 Score=30.01 Aligned_cols=28 Identities=21% Similarity=0.177 Sum_probs=11.9
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q 035917 245 AIIIAAGIFGAAASMLLAFGLWWWYHLRW 273 (611)
Q Consensus 245 ~~ii~~~v~~~~~~~l~~~~l~~~~~~r~ 273 (611)
..+++.++.+++++++++.. ++++.+|+
T Consensus 10 ~aIA~gVVgGv~~v~ii~~~-~~~~~RRR 37 (44)
T 2l2t_A 10 PLIAAGVIGGLFILVIVGLT-FAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHHHHTT
T ss_pred ceEEEeehHHHHHHHHHHHH-HHHHhhhh
Confidence 44444444444444444433 33344433
No 450
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=83.49 E-value=1.9 Score=29.38 Aligned_cols=9 Identities=22% Similarity=0.468 Sum_probs=3.7
Q ss_pred hhhhHHHHH
Q 035917 248 IAAGIFGAA 256 (611)
Q Consensus 248 i~~~v~~~~ 256 (611)
+++++++++
T Consensus 14 Ia~~vVGvl 22 (44)
T 2jwa_A 14 IISAVVGIL 22 (44)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 333444433
No 451
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.74 E-value=0.38 Score=51.33 Aligned_cols=58 Identities=5% Similarity=-0.082 Sum_probs=17.2
Q ss_pred CeeeecCCceEEEEEeCC-CCEEEE------Eeccccchh---HHHHHHHHHHHhccCCCCccceeeEEEe
Q 035917 330 NVIISTRTGTTYKAMLPD-GSVLAV------KRLNTCKLG---EKKFRNEMNRLGQLRHPNLAPLLGYCVV 390 (611)
Q Consensus 330 ~~ig~G~~g~Vy~~~~~~-g~~vAv------K~~~~~~~~---~~~~~~Ev~~l~~l~H~nIv~l~g~~~~ 390 (611)
+.|| ||.||+|.+.. ..+||| |..+..... ...|.+|..++..++|||+++.+++...
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 4565 99999999754 467888 766543222 2468889999999999999999887653
No 452
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=72.97 E-value=11 Score=35.58 Aligned_cols=118 Identities=13% Similarity=0.188 Sum_probs=78.3
Q ss_pred CCCCccceeeEEEeCCeeEEEEeccCCCChHHhhhcCCCCCCHHHHHHHHHHHHHHHH-HHhhcCCCCeeecCCCCCeEE
Q 035917 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSGTLYSLLQGNATELDWPTRFRIGLGAARGLA-WLHHGCQPPFLHQNICSNVIL 455 (611)
Q Consensus 377 ~H~nIv~l~g~~~~~~~~~lv~ey~~~gsL~~~l~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivHrDlkp~NIL 455 (611)
.||++ -...-.+++...+.|+.-+++.=...++ .++...+++++..++.-.. +++ .-+|--+.|+||+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~----~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~ 116 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR----KTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLM 116 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH----TSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH----hcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEE
Confidence 57777 3344456677777777654433233333 3778899999988876554 444 4577889999999
Q ss_pred eCCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccch-HHHHHHHHHHhCCCCCHHHHHH
Q 035917 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGDV-YGIGVVLLELAGFKGNLVDWVN 530 (611)
Q Consensus 456 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV-~SfGvvl~ell~~~~~~~~~~~ 530 (611)
+|.++.+++.-.|+-..+ +|.-+ ...|. -.+=+++..++.++..|.+.+.
T Consensus 117 f~~~~~p~i~hRGi~~~l-------------------pP~e~------~ee~fl~qyKali~all~~K~~Fe~l~~ 167 (219)
T 4ano_A 117 FNRALEPFFLHVGVKESL-------------------PPDEW------DDERLLREVKATVLALTEGEYRFDEYLK 167 (219)
T ss_dssp ECTTCCEEESCCEETTTB-------------------SSCSC------CHHHHHHHHHHHHHHHTTCSSCHHHHHH
T ss_pred EeCCCcEEEEEcCCcccC-------------------CCCCC------CHHHHHHHHHHHHHHHHcCCCCHHHHHh
Confidence 999999999877764432 33211 11233 3566788888888888877665
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=72.46 E-value=10 Score=35.48 Aligned_cols=118 Identities=9% Similarity=0.052 Sum_probs=78.9
Q ss_pred CCCCccceeeEEEeCCeeEEEEeccCCC-ChHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCeEE
Q 035917 377 RHPNLAPLLGYCVVEEEKLLIYKYMSSG-TLYSLLQGNATELDWPTRFRIGLGAARGLAWLHHGCQPPFLHQNICSNVIL 455 (611)
Q Consensus 377 ~H~nIv~l~g~~~~~~~~~lv~ey~~~g-sL~~~l~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL 455 (611)
.||+.+.. .+-...+...+.|+.-+.+ ++.. ++ .++...+++++..|+.-..+++ .-+|--+.|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik----~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK----SFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG----GSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH----hcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecceEE
Confidence 68888866 4555666666666654322 2222 32 3778899999999988776555 2467789999999
Q ss_pred eCCCCCeEEeecccccccCCCCCCccccCCCcccccccccccCCCCCCcccc-hHHHHHHHHHHhCCCCCHHHHHH
Q 035917 456 VDEDFDARIMDFGLAKLMTSSDESSFVNGDLGEFGYIAPEYSSTMVASLKGD-VYGIGVVLLELAGFKGNLVDWVN 530 (611)
Q Consensus 456 ld~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksD-V~SfGvvl~ell~~~~~~~~~~~ 530 (611)
++.++.+++.-.|+...+ +|.- .+ +.| .-.+=+++..+++++..|.+.+.
T Consensus 112 f~~~~~p~i~~RGik~~l-------------------~P~~-----~~-ee~fL~qyKAliiall~~K~~Fe~l~~ 162 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQNVV-------------------DPLP-----VS-EAEFLTRYKALVICAFNEKQSFDALVE 162 (215)
T ss_dssp ECTTSCEEESCCEETTTB-------------------SCCC-----CC-HHHHHHHHHHHHHHHHCTTCCHHHHHH
T ss_pred EcCCCCEEEEEccCccCC-------------------CCCC-----CC-HHHHHHHHHHHHHHHHcCCCCHHHHHc
Confidence 999999999877765433 2210 11 122 33566788888999888876544
No 454
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=30.09 E-value=3.2e+02 Score=27.24 Aligned_cols=132 Identities=17% Similarity=0.176 Sum_probs=67.4
Q ss_pred cCCceEEEEEeCCCCEEEEEeccccchhHHHHHHHHHHHhccCCCCccceeeEE-----------------------EeC
Q 035917 335 TRTGTTYKAMLPDGSVLAVKRLNTCKLGEKKFRNEMNRLGQLRHPNLAPLLGYC-----------------------VVE 391 (611)
Q Consensus 335 G~~g~Vy~~~~~~g~~vAvK~~~~~~~~~~~~~~Ev~~l~~l~H~nIv~l~g~~-----------------------~~~ 391 (611)
+|.+-||.+.. ++..|+||-.. ....+-+-.++...-.+.-|+.. ++.+. ...
T Consensus 79 ~Gstgvff~~t-d~~~~VVK~s~--~l~~E~l~s~LA~~LGlpiP~~R-iv~~~~~E~~e~~~~L~~~~~~~~~l~~l~~ 154 (342)
T 1cja_A 79 KGTEGLFFVET-ESGVFIVKRST--NIESETFCSLLCMRLGLHAPKVR-VVSSNSEEGTNMLECLAAIDKSFRVITTLAN 154 (342)
T ss_dssp STTSCEEEEEE-SSCEEEEECCT--THHHHHHHHHHHHHHTCCCCCEE-EEESSSHHHHHHHHHHHHHCSSSCHHHHHTT
T ss_pred CCCCCeEEEEe-CCCEEEEeCcH--HHHHHHHHHHHHHHhCCCCCCee-EEeeCcHHHHHHHHHHHHhhhhhHHHHHhhc
Confidence 44455666665 68899999552 23334455555555555555521 11111 011
Q ss_pred CeeEEEEeccCCCChHHhhhcCC-CCCCHHHHHHHHHHHHHHHHHHh-hcCCCCeee-cCCCCCeEEeCCCCC-eEEeec
Q 035917 392 EEKLLIYKYMSSGTLYSLLQGNA-TELDWPTRFRIGLGAARGLAWLH-HGCQPPFLH-QNICSNVILVDEDFD-ARIMDF 467 (611)
Q Consensus 392 ~~~~lv~ey~~~gsL~~~l~~~~-~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH-rDlkp~NILld~~~~-~kl~DF 467 (611)
+..+++|||.+|..|.+.-.... ..+....... .+-+-++.++. .....+.+. ..-.++|||++++.. +.++|-
T Consensus 155 ~~~~l~meyv~G~~L~e~~~~~~~~~f~~~~~k~--LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDh 232 (342)
T 1cja_A 155 QANILLMELVRGITLNKLTTTSAPEVLTKSTMQQ--LGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDS 232 (342)
T ss_dssp CSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHH--HHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSC
T ss_pred ccceehhhhcCCCccccchhhhhhhhcCHHHHHh--hchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcC
Confidence 23569999998765544321100 0122122111 11123455554 333333332 235789999976544 888999
Q ss_pred ccccc
Q 035917 468 GLAKL 472 (611)
Q Consensus 468 Gla~~ 472 (611)
+++..
T Consensus 233 n~af~ 237 (342)
T 1cja_A 233 KIIPL 237 (342)
T ss_dssp CCCCC
T ss_pred Ccccc
Confidence 88854
Done!