BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035924
SKISSVTVRADQSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDGAAAAG
NNHFAMEMASLKPWLARKLNHLWLSPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDG
NTALHMRISRVHWKYHIN

High Scoring Gene Products

Symbol, full name Information P value
AT4G11000 protein from Arabidopsis thaliana 1.4e-14
AT1G14480 protein from Arabidopsis thaliana 1.6e-07
AT4G10720 protein from Arabidopsis thaliana 0.00011
AT5G54620 protein from Arabidopsis thaliana 0.00085

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035924
        (138 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2123406 - symbol:AT4G11000 "AT4G11000" species...   192  1.4e-14   1
TAIR|locus:2012532 - symbol:AT1G14480 "AT1G14480" species...    99  1.6e-07   2
TAIR|locus:2132711 - symbol:AT4G10720 "AT4G10720" species...   102  0.00011   1
TAIR|locus:2172099 - symbol:AT5G54620 species:3702 "Arabi...    84  0.00085   2


>TAIR|locus:2123406 [details] [associations]
            symbol:AT4G11000 "AT4G11000" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110 Pfam:PF00023
            SMART:SM00248 EMBL:CP002687 Gene3D:1.25.40.20 InterPro:IPR020683
            Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:AL161518
            EMBL:AL049525 InterPro:IPR026961 Pfam:PF13962 IPI:IPI00525166
            PIR:T04295 RefSeq:NP_192838.1 UniGene:At.54268
            ProteinModelPortal:Q9SN54 SMR:Q9SN54 STRING:Q9SN54 PRIDE:Q9SN54
            EnsemblPlants:AT4G11000.1 GeneID:826701 KEGG:ath:AT4G11000
            TAIR:At4g11000 InParanoid:Q9SN54 OMA:ISIICIM PhylomeDB:Q9SN54
            ArrayExpress:Q9SN54 Genevestigator:Q9SN54 Uniprot:Q9SN54
        Length = 406

 Score = 192 (72.6 bits), Expect = 1.4e-14, P = 1.4e-14
 Identities = 46/128 (35%), Positives = 67/128 (52%)

Query:     9 RADQSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG----------AAA 58
             R+   S +  +IY  + T + +  +   E LY +  EDP++L+  D           AA 
Sbjct:    27 RSSGMSTQDENIYARLKTVAQVGDI---ERLYELIAEDPNILDHFDKVSFCETPLHIAAE 83

Query:    59 AGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDD 118
              G  HFAME+ +LKP LA KLN    SP            VL GW++ +N+++IL WKD+
Sbjct:    84 KGQTHFAMELMTLKPSLALKLNVSGFSPLHLALQNNHIQTVLLGWIKRANRKEILDWKDE 143

Query:   119 DGNTALHM 126
             DGNT  H+
Sbjct:   144 DGNTVFHI 151


>TAIR|locus:2012532 [details] [associations]
            symbol:AT1G14480 "AT1G14480" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110 SMART:SM00248
            EMBL:CP002684 GenomeReviews:CT485782_GR Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            EMBL:AC012188 InterPro:IPR026961 Pfam:PF13962 eggNOG:KOG0504
            HOGENOM:HOG000131606 ProtClustDB:CLSN2682954 IPI:IPI00523168
            PIR:F86279 RefSeq:NP_172900.2 UniGene:At.41970
            ProteinModelPortal:Q9M9R5 SMR:Q9M9R5 STRING:Q9M9R5
            EnsemblPlants:AT1G14480.1 GeneID:838010 KEGG:ath:AT1G14480
            TAIR:At1g14480 InParanoid:Q9M9R5 PhylomeDB:Q9M9R5
            Genevestigator:Q9M9R5 Uniprot:Q9M9R5
        Length = 441

 Score = 99 (39.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
 Identities = 26/58 (44%), Positives = 33/58 (56%)

Query:    39 LYSMFVEDPHVLERMDG----------AAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86
             LY++  E+P++LE +D           AA  GN  FAMEM +LKP  ARKLN    SP
Sbjct:    17 LYALIDENPYILENIDAVPFVSTPLHVAAVFGNIEFAMEMLNLKPSFARKLNTSGYSP 74

 Score = 59 (25.8 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
 Identities = 15/37 (40%), Positives = 23/37 (62%)

Query:    97 IDVLFGWL-RLSNKE------QILKWKDDDGNTALHM 126
             + VL GW+ R+S K+      ++L  +D D NTALH+
Sbjct:   155 LQVLTGWIQRMSQKDAYYIENRVLNKRDFDFNTALHL 191


>TAIR|locus:2132711 [details] [associations]
            symbol:AT4G10720 "AT4G10720" species:3702 "Arabidopsis
            thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002687 Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            InterPro:IPR026961 Pfam:PF13962 UniGene:At.43811 UniGene:At.63690
            EMBL:BT023459 IPI:IPI00543649 RefSeq:NP_192810.2
            ProteinModelPortal:Q4V397 SMR:Q4V397 EnsemblPlants:AT4G10720.1
            GeneID:826666 KEGG:ath:AT4G10720 TAIR:At4g10720
            HOGENOM:HOG000131606 InParanoid:Q4V397 OMA:HHANSNI PhylomeDB:Q4V397
            ProtClustDB:CLSN2680954 Genevestigator:Q4V397 Uniprot:Q4V397
        Length = 445

 Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
 Identities = 34/104 (32%), Positives = 53/104 (50%)

Query:    37 EALYSMFVEDPHVLERMDG----------AAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86
             + LY+   E+P++LE +D           A+A+GN  FAME+ +LKP  ARKLN   LSP
Sbjct:    15 DELYAHIHENPYILEIIDAIPFINTPLHIASASGNLSFAMELMNLKPSFARKLNTYGLSP 74

Query:    87 HARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISR 130
                    G    VL   L++ +   +++ +  +G T  H  + R
Sbjct:    75 LHLAIEEGQTRLVL-SLLKVDS--DLVRLRGREGMTPFHQVVRR 115


>TAIR|locus:2172099 [details] [associations]
            symbol:AT5G54620 species:3702 "Arabidopsis thaliana"
            [GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR002110
            PROSITE:PS50088 SMART:SM00248 EMBL:CP002688 Gene3D:1.25.40.20
            InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
            IPI:IPI00523875 RefSeq:NP_200273.1 UniGene:At.55551
            ProteinModelPortal:F4K1T0 SMR:F4K1T0 EnsemblPlants:AT5G54620.1
            GeneID:835551 KEGG:ath:AT5G54620 Uniprot:F4K1T0
        Length = 431

 Score = 84 (34.6 bits), Expect = 0.00085, Sum P(2) = 0.00085
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query:    37 EALYSMFVEDPHVLERMD----------GAAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86
             +ALY++  +DP++L+ +D           A++ G    AME+  LKP  A+KLN   +SP
Sbjct:    15 DALYALIHKDPYILQNIDVLPFVHTPLHEASSTGKTDLAMELMVLKPTFAKKLNSDGVSP 74

 Score = 55 (24.4 bits), Expect = 0.00085, Sum P(2) = 0.00085
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query:    97 IDVLFGWL-RL------SNKEQILKWKDDDGNTALHM 126
             + VL GW+ RL      S +  +L  +D DGNT LH+
Sbjct:   155 LKVLTGWIHRLHKSDAASTEIHVLNKRDRDGNTILHL 191


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.324   0.135   0.430    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      138       138   0.00091  102 3  11 22  0.38    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  574 (61 KB)
  Total size of DFA:  151 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  12.69u 0.17s 12.86t   Elapsed:  00:00:01
  Total cpu time:  12.69u 0.17s 12.86t   Elapsed:  00:00:01
  Start:  Mon May 20 21:23:58 2013   End:  Mon May 20 21:23:59 2013

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