Query 035924
Match_columns 138
No_of_seqs 205 out of 1297
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 12:51:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035924.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035924hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.2E-22 4.2E-27 146.8 10.9 113 13-135 30-151 (169)
2 1d9s_A Cyclin-dependent kinase 99.9 2.1E-21 7E-26 133.9 9.4 111 13-135 5-126 (136)
3 2jab_A H10-2-G3; HER2, darpin, 99.8 4.7E-21 1.6E-25 132.1 9.8 111 14-135 8-128 (136)
4 4gpm_A Engineered protein OR26 99.8 6.5E-21 2.2E-25 137.7 10.7 103 22-135 6-118 (169)
5 3v30_A DNA-binding protein rfx 99.8 8.5E-21 2.9E-25 134.7 10.3 113 13-135 29-150 (172)
6 1awc_B Protein (GA binding pro 99.8 1.4E-20 4.7E-25 131.7 10.8 110 16-135 30-148 (153)
7 4b93_B Ankyrin repeat domain-c 99.8 3.5E-21 1.2E-25 147.8 8.5 111 14-134 80-199 (269)
8 3twr_A Tankyrase-2; ankyrin re 99.8 5.9E-21 2E-25 134.7 8.9 103 17-129 39-150 (165)
9 2rfm_A Putative ankyrin repeat 99.8 9.8E-21 3.4E-25 136.7 8.4 107 17-134 65-181 (192)
10 3aaa_C Myotrophin, protein V-1 99.8 9.1E-21 3.1E-25 128.3 7.6 104 18-132 5-118 (123)
11 3v31_A Ankyrin repeat family A 99.8 2.7E-20 9.3E-25 131.5 10.2 113 13-135 29-150 (167)
12 1bi7_B P16INK4A, MTS1, multipl 99.8 2.8E-20 9.6E-25 130.8 9.7 110 15-135 7-126 (156)
13 1n0r_A 4ANK, 4 ankyrin repeats 99.8 5.4E-20 1.8E-24 123.2 10.5 107 19-135 1-116 (126)
14 2rfm_A Putative ankyrin repeat 99.8 4.9E-20 1.7E-24 133.0 11.0 113 13-135 28-149 (192)
15 2rfa_A Transient receptor pote 99.8 4.1E-20 1.4E-24 136.4 10.8 114 12-134 29-168 (232)
16 3c5r_A BARD-1, BRCA1-associate 99.8 6.6E-21 2.3E-25 131.1 5.6 109 15-134 5-123 (137)
17 1bd8_A P19INK4D CDK4/6 inhibit 99.8 6.1E-20 2.1E-24 128.1 10.6 111 12-135 28-148 (156)
18 2y1l_E Darpin-8.4; hydrolase-i 99.8 6.5E-20 2.2E-24 130.3 10.9 112 14-135 41-161 (169)
19 2etb_A Transient receptor pote 99.8 4.6E-20 1.6E-24 138.4 10.4 116 16-135 86-236 (256)
20 3v30_A DNA-binding protein rfx 99.8 3.8E-20 1.3E-24 131.3 9.4 106 20-135 2-117 (172)
21 4hbd_A KN motif and ankyrin re 99.8 4.9E-20 1.7E-24 141.3 10.7 114 13-135 104-265 (276)
22 3hra_A Ankyrin repeat family p 99.8 5.7E-20 1.9E-24 132.7 10.0 73 56-134 113-192 (201)
23 3v31_A Ankyrin repeat family A 99.8 9E-20 3.1E-24 128.8 10.8 106 19-135 2-117 (167)
24 2f8y_A Notch homolog 1, transl 99.8 1.4E-19 4.6E-24 132.7 12.0 114 11-133 16-138 (223)
25 3f6q_A Integrin-linked protein 99.8 7.2E-20 2.5E-24 131.0 10.0 111 13-133 32-151 (179)
26 2rfa_A Transient receptor pote 99.8 1.1E-19 3.7E-24 134.1 11.0 118 14-135 69-212 (232)
27 3jxi_A Vanilloid receptor-rela 99.8 7E-20 2.4E-24 137.5 9.9 116 16-135 89-240 (260)
28 1awc_B Protein (GA binding pro 99.8 1.3E-19 4.4E-24 126.7 10.0 106 20-135 2-115 (153)
29 3twr_A Tankyrase-2; ankyrin re 99.8 8.9E-20 3E-24 128.6 9.2 111 15-135 3-123 (165)
30 2f8y_A Notch homolog 1, transl 99.8 1.6E-19 5.6E-24 132.2 10.6 108 16-133 54-171 (223)
31 3ehr_A Osteoclast-stimulating 99.8 5.7E-20 1.9E-24 135.7 7.7 109 15-134 68-187 (222)
32 3deo_A Signal recognition part 99.8 8.5E-20 2.9E-24 131.6 8.4 108 16-134 40-157 (183)
33 1yyh_A HN1;, notch 1, ankyrin 99.8 1.2E-19 4.1E-24 136.5 9.5 76 14-92 51-133 (253)
34 2pnn_A Transient receptor pote 99.8 1.7E-19 5.8E-24 136.7 10.4 116 16-135 97-248 (273)
35 1yyh_A HN1;, notch 1, ankyrin 99.8 1.2E-19 4E-24 136.5 9.4 73 56-135 164-238 (253)
36 2y1l_E Darpin-8.4; hydrolase-i 99.8 1.7E-19 5.9E-24 128.1 9.7 112 13-135 7-128 (169)
37 1oy3_D Transcription factor in 99.8 1.4E-19 4.9E-24 136.1 9.8 73 56-134 165-239 (282)
38 3f6q_A Integrin-linked protein 99.8 6.7E-20 2.3E-24 131.2 7.6 108 18-135 3-120 (179)
39 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.2E-19 4E-24 127.2 8.3 110 14-134 32-151 (162)
40 2dzn_A Probable 26S proteasome 99.8 3.1E-19 1.1E-23 130.9 11.0 72 16-91 32-115 (228)
41 1ycs_B 53BP2, P53BP2; ankyrin 99.8 9E-20 3.1E-24 136.7 7.5 105 19-134 36-153 (239)
42 1bd8_A P19INK4D CDK4/6 inhibit 99.8 1.9E-19 6.6E-24 125.6 8.3 106 20-135 2-116 (156)
43 3hra_A Ankyrin repeat family p 99.8 5.7E-19 1.9E-23 127.5 10.6 113 12-132 31-152 (201)
44 1ihb_A P18-INK4C(INK6), cyclin 99.8 4.4E-19 1.5E-23 124.3 9.7 105 19-135 4-118 (162)
45 2dzn_A Probable 26S proteasome 99.8 6.2E-19 2.1E-23 129.3 10.8 108 20-134 2-121 (228)
46 1ikn_D Protein (I-kappa-B-alph 99.8 3.9E-19 1.3E-23 131.9 9.7 113 13-134 38-165 (236)
47 3aji_A 26S proteasome non-ATPa 99.8 6.8E-19 2.3E-23 129.5 10.8 112 13-134 33-153 (231)
48 3aji_A 26S proteasome non-ATPa 99.8 9.2E-19 3.1E-23 128.8 11.3 111 14-134 67-186 (231)
49 3kea_A K1L; tropism, ANK repea 99.8 2.5E-19 8.7E-24 137.7 8.6 113 12-135 23-144 (285)
50 1oy3_D Transcription factor in 99.8 5.9E-19 2E-23 132.8 9.8 49 80-134 155-206 (282)
51 3b7b_A Euchromatic histone-lys 99.8 1.1E-18 3.7E-23 128.9 10.9 24 110-133 167-190 (237)
52 1ikn_D Protein (I-kappa-B-alph 99.8 3.4E-19 1.2E-23 132.2 8.0 112 14-135 72-199 (236)
53 4b93_B Ankyrin repeat domain-c 99.8 1.9E-19 6.4E-24 138.2 6.8 108 14-132 113-230 (269)
54 3t8k_A Uncharacterized protein 99.8 3.4E-19 1.2E-23 130.3 7.9 112 14-134 32-168 (186)
55 1s70_B 130 kDa myosin-binding 99.8 1.1E-18 3.8E-23 132.9 10.9 112 14-135 67-247 (299)
56 3ljn_A Hypothetical protein; a 99.8 2.7E-19 9.3E-24 140.6 7.8 111 15-135 133-259 (364)
57 2xai_A ASB-9, ankyrin repeat a 99.8 1E-18 3.4E-23 132.2 10.2 107 15-132 31-146 (261)
58 3ui2_A Signal recognition part 99.8 5.5E-19 1.9E-23 133.3 8.7 107 15-132 40-156 (244)
59 3d9h_A CDNA FLJ77766, highly s 99.8 1.9E-18 6.5E-23 132.7 11.7 119 11-134 50-204 (285)
60 1k1a_A B-cell lymphoma 3-encod 99.8 1.4E-18 4.7E-23 128.2 10.3 112 14-132 3-128 (241)
61 2vge_A RELA-associated inhibit 99.8 2.5E-19 8.4E-24 134.5 6.4 115 9-134 10-137 (229)
62 3b7b_A Euchromatic histone-lys 99.8 2E-18 6.9E-23 127.5 10.8 108 18-134 42-158 (237)
63 1n11_A Ankyrin; clathrin, BAND 99.8 1.1E-18 3.8E-23 139.9 10.1 111 14-134 8-127 (437)
64 1k1a_A B-cell lymphoma 3-encod 99.8 1.7E-18 5.8E-23 127.7 10.3 72 56-134 123-197 (241)
65 2xai_A ASB-9, ankyrin repeat a 99.8 1.6E-18 5.4E-23 131.1 10.3 112 13-135 62-181 (261)
66 1sw6_A Regulatory protein SWI6 99.8 2.7E-19 9.1E-24 140.2 6.1 116 16-135 127-298 (327)
67 3jxi_A Vanilloid receptor-rela 99.8 5.4E-19 1.8E-23 132.6 7.4 112 17-132 43-188 (260)
68 2vge_A RELA-associated inhibit 99.8 1.1E-19 3.7E-24 136.4 3.5 118 14-135 48-203 (229)
69 1wdy_A 2-5A-dependent ribonucl 99.8 2.9E-18 9.9E-23 128.4 10.5 108 18-135 3-120 (285)
70 3utm_A Tankyrase-1; tankyrase, 99.8 1.5E-18 5.2E-23 133.7 9.1 111 15-135 19-139 (351)
71 4g8k_A 2-5A-dependent ribonucl 99.8 2.7E-18 9.3E-23 133.6 10.0 112 14-135 162-288 (337)
72 2etb_A Transient receptor pote 99.8 9.1E-19 3.1E-23 131.3 6.9 114 16-133 39-187 (256)
73 2pnn_A Transient receptor pote 99.8 1.7E-18 5.8E-23 131.1 8.1 113 16-132 50-196 (273)
74 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.8E-18 6E-23 129.6 8.0 108 18-135 3-118 (239)
75 3d9h_A CDNA FLJ77766, highly s 99.8 4.6E-18 1.6E-22 130.5 10.2 71 56-134 164-236 (285)
76 3utm_A Tankyrase-1; tankyrase, 99.8 9.2E-18 3.2E-22 129.3 11.9 85 13-102 51-145 (351)
77 1n11_A Ankyrin; clathrin, BAND 99.7 3.3E-18 1.1E-22 137.1 9.5 71 56-133 285-357 (437)
78 2fo1_E LIN-12 protein; beta-ba 99.7 5.6E-18 1.9E-22 134.7 9.6 112 15-135 230-361 (373)
79 1dcq_A PYK2-associated protein 99.7 9.2E-18 3.1E-22 129.5 10.2 106 20-135 130-253 (278)
80 3eu9_A Huntingtin-interacting 99.7 1.3E-17 4.5E-22 122.2 10.5 108 15-132 37-154 (240)
81 1n0q_A 3ANK, 3 ankyrin repeats 99.7 1.1E-17 3.8E-22 108.2 8.5 80 20-135 2-83 (93)
82 1wdy_A 2-5A-dependent ribonucl 99.7 2E-17 7E-22 123.8 11.1 112 14-135 33-163 (285)
83 1s70_B 130 kDa myosin-binding 99.7 3.8E-18 1.3E-22 129.9 6.7 107 17-134 37-153 (299)
84 3ljn_A Hypothetical protein; a 99.7 8.1E-18 2.8E-22 132.1 8.7 29 16-47 49-77 (364)
85 3eu9_A Huntingtin-interacting 99.7 2.7E-17 9.3E-22 120.5 11.0 109 17-134 6-123 (240)
86 3kea_A K1L; tropism, ANK repea 99.7 6.8E-18 2.3E-22 129.7 7.8 109 16-135 91-210 (285)
87 4g8k_A 2-5A-dependent ribonucl 99.7 1E-17 3.5E-22 130.3 8.7 114 18-134 23-182 (337)
88 2b0o_E UPLC1; arfgap, structur 99.7 2.8E-17 9.6E-22 128.2 10.1 104 22-135 153-274 (301)
89 3t8k_A Uncharacterized protein 99.7 5.5E-18 1.9E-22 123.9 5.4 104 20-133 6-128 (186)
90 1sw6_A Regulatory protein SWI6 99.7 2.5E-18 8.4E-23 134.7 3.3 109 14-131 158-327 (327)
91 3lvq_E ARF-GAP with SH3 domain 99.7 3.3E-17 1.1E-21 135.2 9.3 104 22-135 134-255 (497)
92 2fo1_E LIN-12 protein; beta-ba 99.7 4E-17 1.4E-21 129.7 9.4 119 13-135 159-294 (373)
93 3jue_A Arfgap with coiled-coil 99.7 1E-16 3.5E-21 128.9 10.3 108 19-135 198-316 (368)
94 2l6b_A NR1C; ankyrin, consensu 99.7 1.3E-16 4.4E-21 106.4 5.9 99 14-123 3-111 (115)
95 2aja_A Ankyrin repeat family p 99.6 3.8E-17 1.3E-21 131.7 3.1 107 19-135 91-214 (376)
96 2zgd_A 3 repeat synthetic anky 99.6 3.2E-16 1.1E-20 104.5 7.2 92 8-135 12-105 (110)
97 2b0o_E UPLC1; arfgap, structur 99.6 2.6E-16 8.8E-21 122.7 7.6 105 16-134 186-300 (301)
98 3aaa_C Myotrophin, protein V-1 99.6 2.3E-15 7.8E-20 101.5 6.9 73 56-135 14-88 (123)
99 3ui2_A Signal recognition part 99.6 2.4E-15 8.1E-20 113.2 7.4 97 13-134 70-174 (244)
100 4hbd_A KN motif and ankyrin re 99.6 6.7E-16 2.3E-20 118.2 3.4 108 19-135 75-231 (276)
101 2jab_A H10-2-G3; HER2, darpin, 99.6 8.1E-15 2.8E-19 100.5 7.8 73 56-135 21-95 (136)
102 1bi7_B P16INK4A, MTS1, multipl 99.6 2E-15 6.8E-20 105.8 4.5 104 13-127 38-151 (156)
103 2aja_A Ankyrin repeat family p 99.5 4.6E-16 1.6E-20 125.4 -0.2 103 17-135 125-240 (376)
104 3c5r_A BARD-1, BRCA1-associate 99.5 1.4E-14 4.8E-19 99.1 6.8 73 56-135 17-91 (137)
105 3deo_A Signal recognition part 99.5 1.8E-14 6E-19 103.5 6.6 98 13-135 69-174 (183)
106 2l6b_A NR1C; ankyrin, consensu 99.5 1.7E-14 6E-19 95.9 4.4 73 56-135 16-90 (115)
107 3ehr_A Osteoclast-stimulating 99.5 5.1E-14 1.7E-18 103.5 6.3 74 56-135 80-155 (222)
108 1n0r_A 4ANK, 4 ankyrin repeats 99.5 2E-13 6.7E-18 90.8 7.7 73 56-135 9-83 (126)
109 1d9s_A Cyclin-dependent kinase 99.5 3.7E-14 1.3E-18 97.2 3.8 73 56-135 19-93 (136)
110 1dcq_A PYK2-associated protein 99.4 1.4E-13 4.9E-18 105.9 6.3 101 14-130 163-273 (278)
111 3lvq_E ARF-GAP with SH3 domain 99.4 3E-13 1E-17 111.5 7.1 99 17-129 168-276 (497)
112 3jue_A Arfgap with coiled-coil 99.4 1.5E-12 5E-17 104.6 8.6 107 18-132 233-349 (368)
113 1n0q_A 3ANK, 3 ankyrin repeats 99.2 3E-11 1E-15 77.5 5.2 48 82-135 1-50 (93)
114 2zgd_A 3 repeat synthetic anky 99.0 3.4E-10 1.2E-14 74.9 4.8 56 74-135 15-72 (110)
115 3fh1_A Uncharacterized NTF2-li 47.8 3.5 0.00012 26.7 -0.2 41 4-47 6-46 (129)
116 1gp8_A Protein (scaffolding pr 40.3 23 0.00078 19.0 2.3 18 22-42 15-32 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.88 E-value=1.2e-22 Score=146.84 Aligned_cols=113 Identities=12% Similarity=0.029 Sum_probs=94.7
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccccc----H---HHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMD----G---AAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d----~---Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
.+..+..|.||||.|+.. |+.++++.|++.+.++..... . ||..|+.++|++|++.++++ +.+|.+|+|
T Consensus 30 vn~~d~~g~t~l~~a~~~---~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadv-n~~d~~G~T 105 (169)
T 4gpm_A 30 VNASDSDGRTPLHHAAEN---GHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRT 105 (169)
T ss_dssp TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred CCCcCCCCCCHHHHHHHc---CCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCC-CCCCCCCCC
Confidence 345678899999999999 999999999998765422211 1 99999999999999998886 467999999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|||+|+.. .++++.|++ .++++|.+|.+|+||||+|+.+|+.++
T Consensus 106 pLh~A~~~g~~~~v~~Ll~------~gad~~~~d~~G~TpL~~A~~~g~~~i 151 (169)
T 4gpm_A 106 PLHHAAENGHKEVVKLLIS------KGADVNTSDSDGRTPLDLAREHGNEEV 151 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 99999754 688899886 367899999999999999999998753
No 2
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.85 E-value=2.1e-21 Score=133.86 Aligned_cols=111 Identities=10% Similarity=-0.058 Sum_probs=92.9
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCC-C
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHL-W 83 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~-G 83 (138)
.+..+..+.||||.|+.. |+.++++.|++.+.++. ..+. |+. |+.++|++|++.++++ +..|.. |
T Consensus 5 ~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g 78 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAAR---GQVETVRQLLEAGADPN-ALNRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATL 78 (136)
T ss_dssp CSCCCCCCSCHHHHHHHT---TCHHHHHHHHHTTCCTT-CCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTT
T ss_pred ccCCCCCCccHHHHHHHc---CCHHHHHHHHHcCCCcC-CcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCC
Confidence 345667889999999999 99999999999865542 2222 888 9999999999988876 456888 9
Q ss_pred chHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 84 LSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 84 ~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+||||+|+.. .++++.|++ .++.++.+|..|+||||+|+..|+.++
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~ 126 (136)
T 1d9s_A 79 TRPVHDAAREGFLDTLVVLHR------AGARLDVCDAWGRLPVDLAEEQGHRDI 126 (136)
T ss_dssp BCHHHHHHHHTCHHHHHHHHH------TCCCCCCCSSSSSCHHHHHHHHTCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHH------cCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 9999999765 788898886 367899999999999999999998753
No 3
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.85 E-value=4.7e-21 Score=132.06 Aligned_cols=111 Identities=12% Similarity=0.054 Sum_probs=91.2
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
......+.||||.|+.. |+.++|+.|++.++++. ..|. |+..|+.++|++|++.++++ +..|..|+|
T Consensus 8 ~~~~~~~~t~l~~A~~~---g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t 82 (136)
T 2jab_A 8 HHHGSDLGKKLLEAARA---GQDDEVRILMANGADVN-AKDEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFT 82 (136)
T ss_dssp ----CHHHHHHHHHHHH---TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCC
T ss_pred CcccccccHHHHHHHHh---CCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCC
Confidence 34455678999999999 99999999999876542 2222 99999999999999988776 457899999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|||+|+.. .++++.|++ .++.++.+|.+|+||||+|+..|+.++
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~tpl~~A~~~~~~~~ 128 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLK------HGADVNAQDKFGKTAFDISIGNGNEDL 128 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCcCcCCCCCCHHHHHHHCCCHHH
Confidence 99999765 688898886 367799999999999999999998754
No 4
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.85 E-value=6.5e-21 Score=137.74 Aligned_cols=103 Identities=17% Similarity=0.119 Sum_probs=88.8
Q ss_pred cHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH
Q 035924 22 NYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG 93 (138)
Q Consensus 22 t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~ 93 (138)
++|+.||+. |++++|+.||+.+.++ +..|. |+..|+.++++.|++.++++ +.+|.+|+||||+|+..
T Consensus 6 ~~L~~Aa~~---G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~ 80 (169)
T 4gpm_A 6 KRLIEAAEN---GNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAEN 80 (169)
T ss_dssp HHHHHHHHT---TCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHT
T ss_pred HHHHHHHHc---CCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHc
Confidence 679999999 9999999999987665 22222 99999999999999998876 46799999999999764
Q ss_pred --HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 94 --GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 94 --~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
.++++.|++ .++++|.+|.+|+||||+|+..|+.++
T Consensus 81 g~~~~v~~Ll~------~gadvn~~d~~G~TpLh~A~~~g~~~~ 118 (169)
T 4gpm_A 81 GHKEVVKLLIS------KGADVNAKDSDGRTPLHHAAENGHKEV 118 (169)
T ss_dssp TCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHHH------CcCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 688899986 367899999999999999999998753
No 5
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.84 E-value=8.5e-21 Score=134.68 Aligned_cols=113 Identities=11% Similarity=-0.012 Sum_probs=93.6
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
.+..+..+.||||.|+.. |+.++|+.|++.+.++.... ..|+..|+.++|++|++.++++ +..|..|+|
T Consensus 29 ~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 104 (172)
T 3v30_A 29 VNKPDERGFTPLIWASAF---GEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGT 104 (172)
T ss_dssp GGCCCTTSCCHHHHHHHT---TCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCC
T ss_pred ccCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCC
Confidence 455677899999999999 99999999999765542211 1199999999999999988776 467899999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|||+|... .++++.|++ .++.++.+|..|+||||+|+..|+.++
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~~ 150 (172)
T 3v30_A 105 PLLYAVRGNHVKCVEALLA------RGADLTTEADSGYTPMDLAVALGYRKV 150 (172)
T ss_dssp HHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHHhCcHHH
Confidence 99999654 688888886 367899999999999999999998753
No 6
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.84 E-value=1.4e-20 Score=131.69 Aligned_cols=110 Identities=8% Similarity=-0.067 Sum_probs=91.8
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccccc-------HHHHccCHHHHHHHhccCCccccccCCCCchHHH
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMD-------GAAAAGNNHFAMEMASLKPWLARKLNHLWLSPHA 88 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d-------~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH 88 (138)
.+..+.||||.|+.. |+.++++.|++.++++..... .|+..|+.++|++|++.++++ +..|..|+||||
T Consensus 30 ~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~ 105 (153)
T 1awc_B 30 TDWLGTSPLHLAAQY---GHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADV-NAKDMLKMTALH 105 (153)
T ss_dssp CCTTCCCHHHHHHHH---TCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTSCCHHH
T ss_pred cCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCC-CCCCCCCCCHHH
Confidence 366789999999999 999999999987665422111 199999999999999988876 457999999999
Q ss_pred HHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 89 RGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 89 ~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+|... .++++.|++ .++.++.+|..|+||||+|+.+|+.++
T Consensus 106 ~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~i 148 (153)
T 1awc_B 106 WATEHNHQEVVELLIK------YGADVHTQSKFCKTAFDISIDNGNEDL 148 (153)
T ss_dssp HHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHcCCHHHHHHHHH------cCCCccccCCCCCCHHHHHHHcCCHHH
Confidence 99654 688888886 367899999999999999999998764
No 7
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.84 E-value=3.5e-21 Score=147.83 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=77.0
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccccc-------HHHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMD-------GAAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d-------~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
+..+..|.||||.||.. |+.++|+.||+.++++..... .|+..|+.++++.|++.++++ +.+|..|+||
T Consensus 80 n~~d~~G~TpLh~A~~~---g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~Tp 155 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALH---GRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTP 155 (269)
T ss_dssp TCCCTTSCCHHHHHHHT---TCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCH
T ss_pred CCcCCCCCCHHHHHHHc---CcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCH
Confidence 45677899999999999 999999999987665422211 177777777777777776665 3457777777
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
||+|+.. .++++.|++ .++++|.+|..|+||||+|+.+|+.+
T Consensus 156 L~~A~~~g~~~~v~~Ll~------~gadvn~~~~~g~t~Lh~A~~~g~~~ 199 (269)
T 4b93_B 156 LIYACSGGHHELVALLLQ------HGASINASNNKGNTALHEAVIEKHVF 199 (269)
T ss_dssp HHHHHHTTCGGGHHHHHH------TTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHHHCCCHHHHHHHHH------CCCCCCccccCCCcHHHHHHHcCCHH
Confidence 7777543 455666664 24556666666777777776666654
No 8
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.84 E-value=5.9e-21 Score=134.68 Aligned_cols=103 Identities=13% Similarity=0.044 Sum_probs=47.1
Q ss_pred hhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccccc-------HHHHccCHHHHHHHhccCCccccccCCCCchHHHH
Q 035924 17 QRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMD-------GAAAAGNNHFAMEMASLKPWLARKLNHLWLSPHAR 89 (138)
Q Consensus 17 ~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d-------~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~ 89 (138)
+..+.||||.|+.. |+.++++.|++.+.++..... .|+..|+.++|++|++.++++ +..|..|+||||+
T Consensus 39 ~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 114 (165)
T 3twr_A 39 EGRQSTPLHFAAGY---NRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPLHE 114 (165)
T ss_dssp TTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred ccCCCCHHHHHHHc---ChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHHHH
Confidence 33444555555555 555555555554332211100 055555555555555544443 2334555555555
Q ss_pred HHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHh
Q 035924 90 GFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRIS 129 (138)
Q Consensus 90 A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~ 129 (138)
|... .++++.|++ .++.++.+|..|+||||+|+.
T Consensus 115 A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 115 AAAKGKYEICKLLLQ------HGADPTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp HHHTTCHHHHHHHHH------TTCCTTCCCTTSCCTGGGSCT
T ss_pred HHHcCCHHHHHHHHH------cCCCCcccCCCCCChhHhHhc
Confidence 5332 344444443 134455555555555555443
No 9
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.83 E-value=9.8e-21 Score=136.75 Aligned_cols=107 Identities=10% Similarity=-0.133 Sum_probs=54.4
Q ss_pred hhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHH
Q 035924 17 QRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHA 88 (138)
Q Consensus 17 ~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH 88 (138)
+..+.||||.|+.. |+.++++.|++.++++. ..|. |+..|+.+++++|++.++++ +..|..|+||||
T Consensus 65 ~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~ 139 (192)
T 2rfm_A 65 DIEGSTALIWAVKN---NRLGIAEKLLSKGSNVN-TKDFSGKTPLMWSIIFGYSEMSYFLLEHGANV-NDRNLEGETPLI 139 (192)
T ss_dssp CTTSCCHHHHHHHT---TCHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTCCCHHH
T ss_pred cccCccHHHHHHHc---CCHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHH
Confidence 33445555555555 55555555554433321 1110 55555555555555554443 234555555555
Q ss_pred HHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 89 RGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 89 ~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
+|+.. .++++.|++ .++.++.+|..|+||||+|+..|+.+
T Consensus 140 ~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~~~ 181 (192)
T 2rfm_A 140 VASKYGRSEIVKKLLE------LGADISARDLTGLTAEASARIFGRQE 181 (192)
T ss_dssp HHHHHTCHHHHHHHHH------TTCCTTCBCTTSCBHHHHHHHTTCHH
T ss_pred HHHHcCCHHHHHHHHH------CCCCCCCcCCCCCCHHHHHHHhCcHH
Confidence 55433 455555554 24556666666666666666666554
No 10
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=9.1e-21 Score=128.35 Aligned_cols=104 Identities=13% Similarity=-0.008 Sum_probs=86.2
Q ss_pred hccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHHH
Q 035924 18 RHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHAR 89 (138)
Q Consensus 18 ~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~ 89 (138)
+.+.||||.|+.. |+.++++.|++.++++ +..|. ||..|+.++|++|++.++++ +.+|..|+||||+
T Consensus 5 ~~~~~~l~~A~~~---~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 5 SMCDKEFMWALKN---GDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLS 79 (123)
T ss_dssp --CHHHHHHHHHT---TCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHH
T ss_pred cccchHHHHHHHc---CCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHH
Confidence 4567999999999 9999999999987654 22221 99999999999999988876 4679999999999
Q ss_pred HHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 90 GFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 90 A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
|+.. .++++.|++ .++.++.+|.+|+||||+|+..+.
T Consensus 80 A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~~~~~ 118 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLS------KGADKTVKGPDGLTAFEATDNQAI 118 (123)
T ss_dssp HHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHCCCHHH
T ss_pred HHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHhCCHHH
Confidence 9765 788898886 367799999999999999965544
No 11
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.83 E-value=2.7e-20 Score=131.49 Aligned_cols=113 Identities=6% Similarity=-0.048 Sum_probs=90.2
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccc--c-----cHHHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLER--M-----DGAAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~--~-----d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
.+..+..+.||||.|+.. |+.++++.|++.+.++... . ..|+..|+.+++++|++.++++ +..|..|+|
T Consensus 29 ~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 104 (167)
T 3v31_A 29 INHTDEEGFTPLMWAAAH---GQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGT 104 (167)
T ss_dssp TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCC
T ss_pred cCCCCCCCCCHHHHHHHC---CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCC
Confidence 455677888999999999 9999999999876544211 1 1189999999999999888776 456889999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|||+|+.. .++++.|++ .++.++.+|..|+||||+|+..|+.++
T Consensus 105 ~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~ 150 (167)
T 3v31_A 105 PLLYAVHGNHVKCVKMLLE------SGADPTIETDSGYNSMDLAVALGYRSV 150 (167)
T ss_dssp HHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 99999654 678888886 367789999999999999999998754
No 12
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.83 E-value=2.8e-20 Score=130.85 Aligned_cols=110 Identities=12% Similarity=-0.014 Sum_probs=89.4
Q ss_pred hhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH-------HHHccCHHHHHHHhccCCccccccCCCCch-H
Q 035924 15 FEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG-------AAAAGNNHFAMEMASLKPWLARKLNHLWLS-P 86 (138)
Q Consensus 15 ~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~-------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T-p 86 (138)
..++.+.||||.|+.. |+.++|+.|++.+.++. ..+. .|..|+.++|++|++.++++ +..|..|+| |
T Consensus 7 ~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~v~~Ll~~g~~~-~~~d~~g~ttp 81 (156)
T 1bi7_B 7 SSMEPSADWLATAAAR---GRVEEVRALLEAGANPN-APNSYGRRPIQVMMMGSARVAELLLLHGAEP-NCADPATLTRP 81 (156)
T ss_dssp ---CCSTTHHHHHHHH---TCHHHHHHHHTTTCCTT-CCCSSSCCTTTSSCTTCHHHHHHHHTTTCCC-CCCCTTTCCCH
T ss_pred CCCccchHHHHHHHHc---CCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcHH
Confidence 3466788999999999 99999999999765542 2221 23599999999999988776 467999999 9
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
||+|+.. .++++.|++. ++.+|.+|..|+||||+|+..|+.++
T Consensus 82 L~~A~~~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~~ 126 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHRA------GARLDVRDAWGRLPVDLAEELGHRDV 126 (156)
T ss_dssp HHHHHHHTCHHHHHHHHHH------TCCSSCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHCCCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHhCHHHH
Confidence 9999765 7888999874 67899999999999999999998753
No 13
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.83 E-value=5.4e-20 Score=123.18 Aligned_cols=107 Identities=13% Similarity=0.023 Sum_probs=89.2
Q ss_pred ccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCchHHHHHH
Q 035924 19 HIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGF 91 (138)
Q Consensus 19 ~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~ 91 (138)
.|.||||.|++. |+.++++.|++.++++-... ..|+..|+.+++++|++.++++ +..|..|+||||+|.
T Consensus 1 ~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 1 NGRTPLHLAARN---GHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAA 76 (126)
T ss_dssp CCCCHHHHHHHH---TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHc---CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHH
Confidence 378999999999 99999999999766542211 1199999999999999988776 457899999999996
Q ss_pred HH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 92 VG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 92 ~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
.. .++++.|++ .+..++.+|..|+||||+|+..|+.++
T Consensus 77 ~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~ 116 (126)
T 1n0r_A 77 RNGHLEVVKLLLE------AGADVNAKDKNGRTPLHLAARNGHLEV 116 (126)
T ss_dssp HTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HcChHHHHHHHHH------cCCCCcccCCCCCCHHHHHHHcCcHHH
Confidence 54 678888886 367789999999999999999998653
No 14
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.83 E-value=4.9e-20 Score=133.03 Aligned_cols=113 Identities=8% Similarity=-0.042 Sum_probs=94.2
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
.+.++..+.||||.|+.. |+.++++.|++.++++.... ..|+..|+.++|++|++.++++ +..|..|+|
T Consensus 28 ~n~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 103 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACML---GMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKT 103 (192)
T ss_dssp HTCCCTTCCCHHHHHHHH---TCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCC
T ss_pred HhCcCCCCCCHHHHHHHc---CCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCc
Confidence 345688899999999999 99999999998765432111 1199999999999999988876 457999999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|||+|+.. .++++.|++ .++.+|.+|..|+||||+|+..|+.++
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~ 149 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLE------HGANVNDRNLEGETPLIVASKYGRSEI 149 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHH------TTCCSSCCCTTCCCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 99999765 678888886 367899999999999999999998753
No 15
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.83 E-value=4.1e-20 Score=136.43 Aligned_cols=114 Identities=14% Similarity=0.032 Sum_probs=93.0
Q ss_pred CCchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccc----cccH--------HHHccCHHHHHHHhccCCccccc-
Q 035924 12 QSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLE----RMDG--------AAAAGNNHFAMEMASLKPWLARK- 78 (138)
Q Consensus 12 ~~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~----~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~- 78 (138)
..+..+..+.||||.|+.. |+.++++.|++.++.+.. ..|. |+..|+.++|++|++.++++...
T Consensus 29 ~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 105 (232)
T 2rfa_A 29 EVHQRGAMGETALHIAALY---DNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARA 105 (232)
T ss_dssp CTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CcccCCCCCCCHHHHHHHc---CCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCccc
Confidence 3455678899999999999 999999999998776522 1111 99999999999999988776422
Q ss_pred -----------cCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 79 -----------LNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 79 -----------~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
.|..|+||||+|+.. .++++.|++ .++.+|.+|..|+||||+|+..|+.+
T Consensus 106 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~t~L~~A~~~~~~~ 168 (232)
T 2rfa_A 106 TGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE------HGADIRAQDSLGNTVLHILILQPNKT 168 (232)
T ss_dssp CSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHTCSCHH
T ss_pred CCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCCHHHHHHHcCChH
Confidence 123799999999765 688899886 36789999999999999999999875
No 16
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.82 E-value=6.6e-21 Score=131.06 Aligned_cols=109 Identities=9% Similarity=-0.069 Sum_probs=91.4
Q ss_pred hhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 15 FEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 15 ~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
.++..+.||||.|+.. |+.++++.|++.+.++. ..|. |+..|+.+++++|++.++++ +..|..|+||
T Consensus 5 ~~~~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~ 79 (137)
T 3c5r_A 5 FTNHRGETLLHIASIK---GDIPSVEYLLQNGSDPN-VKDHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSP 79 (137)
T ss_dssp CCCTTCCCHHHHHHHH---TCHHHHHHHHHTTCCSC-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCH
T ss_pred CcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCC-cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCH
Confidence 5677899999999999 99999999999766542 2221 99999999999999988776 4579999999
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
||+|+.. .++++.|++ .++.++.+|..|+||||+|+..++.+
T Consensus 80 L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~~ 123 (137)
T 3c5r_A 80 LHDAAKNGHVDIVKLLLS------YGASRNAVNIFGLRPVDYTDDESMKS 123 (137)
T ss_dssp HHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCGGGGCCCHHHHH
T ss_pred HHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCHHHHHhhccHHH
Confidence 9999654 688898886 36789999999999999999877654
No 17
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.82 E-value=6.1e-20 Score=128.13 Aligned_cols=111 Identities=12% Similarity=0.016 Sum_probs=91.9
Q ss_pred CCchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCC
Q 035924 12 QSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLW 83 (138)
Q Consensus 12 ~~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G 83 (138)
..+..+..+.||||. +.. |+.++++.|++.+.++. ..|. |+..|+.+++++|++.++++ +..|..|
T Consensus 28 ~~~~~~~~g~t~L~~-~~~---~~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g 101 (156)
T 1bd8_A 28 HPDALNRFGKTALQV-MMF---GSTAIALELLKQGASPN-VQDTSGTSPVHDAARTGFLDTLKVLVEHGADV-NVPDGTG 101 (156)
T ss_dssp CTTCCCTTSCCHHHH-SCT---TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS-CCCCTTS
T ss_pred CccccCCCCCcHHHH-HHc---CCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCC
Confidence 345567789999999 999 99999999999866542 2221 99999999999999988776 4578999
Q ss_pred chHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 84 LSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 84 ~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+||||+|+.. .++++.|++ . +.++.+|.+|+||||+|+..|+.++
T Consensus 102 ~t~L~~A~~~~~~~~v~~Ll~------~-~~~~~~~~~g~t~l~~A~~~~~~~~ 148 (156)
T 1bd8_A 102 ALPIHLAVQEGHTAVVSFLAA------E-SDLHRRDARGLTPLELALQRGAQDL 148 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHT------T-SCTTCCCTTSCCHHHHHHHSCCHHH
T ss_pred CcHHHHHHHhChHHHHHHHHh------c-cCCCCcCCCCCCHHHHHHHcCcHHH
Confidence 9999999765 678888875 2 6789999999999999999998764
No 18
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.82 E-value=6.5e-20 Score=130.33 Aligned_cols=112 Identities=13% Similarity=-0.017 Sum_probs=86.5
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
+..+..+.||||.|+.. |+.++++.|++.+.++.... ..|+..|+.+++++|++.++++ +..|..|+||
T Consensus 41 ~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~ 116 (169)
T 2y1l_E 41 NAEDASGWTPLHLAAFN---GHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADV-NANDMEGHTP 116 (169)
T ss_dssp TCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence 34566788999999999 99999999988765442111 1188899999999999887775 3568889999
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
||+|... .++++.|++ .++.++.+|..|+||||+|+..|+.++
T Consensus 117 L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~~ 161 (169)
T 2y1l_E 117 LHLAAMFGHLEIVEVLLK------NGADVNAQDKFGKTAFDISIDNGNEDL 161 (169)
T ss_dssp HHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHhCCHHH
Confidence 9998654 677888876 356788899999999999999988653
No 19
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.82 E-value=4.6e-20 Score=138.42 Aligned_cols=116 Identities=11% Similarity=-0.093 Sum_probs=89.8
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-----------------cH---HHHccCHHHHHHHhc---cC
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-----------------DG---AAAAGNNHFAMEMAS---LK 72 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-----------------d~---Aa~~G~~~~v~~Ll~---~~ 72 (138)
.+..+.||||.|+.. |+.++++.|++.++++.... .. |+..|+.++|++|++ .+
T Consensus 86 ~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~g 162 (256)
T 2etb_A 86 EFYQGHSALHIAIEK---RSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQP 162 (256)
T ss_dssp TTTTTCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred ccccCCCHHHHHHHc---CCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 346789999999999 99999999999876542211 11 999999999999999 67
Q ss_pred CccccccCCCCchHHHHHHHH----HH-------HHHHHHHHhhhcCc-ccccccccCCCCcHHHHHHhcCCccc
Q 035924 73 PWLARKLNHLWLSPHARGFVG----GI-------AIDVLFGWLRLSNK-EQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 73 ~~~~~~~d~~G~TpLH~A~~~----~~-------~v~~Ll~~~~~~~~-~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
.++ +.+|..|+||||+|+.. .+ +++.|++....... ...+|.+|..|+||||+|+..|+.++
T Consensus 163 a~~-n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 236 (256)
T 2etb_A 163 ASL-EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEI 236 (256)
T ss_dssp CCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCc-CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHH
Confidence 765 46799999999999753 34 78888875332100 01118999999999999999998754
No 20
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.82 E-value=3.8e-20 Score=131.29 Aligned_cols=106 Identities=15% Similarity=0.052 Sum_probs=90.0
Q ss_pred cCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHHHHH
Q 035924 20 IYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGF 91 (138)
Q Consensus 20 ~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~ 91 (138)
..||||.||.. |+++.++.|++.++...+..+. |+..|+.++|++|++.++++ +..|..|+||||+|+
T Consensus 2 ~~~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 77 (172)
T 3v30_A 2 DSLSIHQLAAQ---GELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLAS 77 (172)
T ss_dssp --CCHHHHHHT---TCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHH
T ss_pred chhhHHHHHHc---CCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHH
Confidence 35899999999 9999999999988775555443 99999999999999988776 457899999999996
Q ss_pred HH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 92 VG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 92 ~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
.. .++++.|++ .+..+|.+|..|+||||+|+..|+.++
T Consensus 78 ~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~ 117 (172)
T 3v30_A 78 TGGYTDIVGLLLE------RDVDINIYDWNGGTPLLYAVRGNHVKC 117 (172)
T ss_dssp HTTCHHHHHHHHT------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HCCCHHHHHHHHH------cCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 54 678888885 467899999999999999999998753
No 21
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.82 E-value=4.9e-20 Score=141.29 Aligned_cols=114 Identities=8% Similarity=-0.015 Sum_probs=90.8
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccc--------------------------------------cc
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLER--------------------------------------MD 54 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~--------------------------------------~d 54 (138)
.+..|..|.||||.|+.. |+.++|+.||+.++...+. .+
T Consensus 104 ~n~~d~~g~T~Lh~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~ 180 (276)
T 4hbd_A 104 VNIADSNGNTALHYSVSH---ANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKAS 180 (276)
T ss_dssp HTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCT
T ss_pred CcCCCCCCCCHHHHHHHC---CCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccC
Confidence 345678899999999999 9999999999876511110 00
Q ss_pred H--------HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHH
Q 035924 55 G--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTAL 124 (138)
Q Consensus 55 ~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpL 124 (138)
. ||..|+.++|++|++.++++ +..|..|+||||+|+.. .++++.|++ ..++++|.+|.+|+|||
T Consensus 181 ~~g~tpLh~A~~~g~~~~v~~Ll~~gad~-n~~d~~G~TpLh~A~~~g~~~iv~~Ll~-----~~gad~~~~d~~g~TpL 254 (276)
T 4hbd_A 181 QAGQTALMLAVSHGRVDVVKALLACEADV-NVQDDDGSTALMCACEHGHKEIAGLLLA-----VPSCDISLTDRDGSTAL 254 (276)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHT-----STTCCTTCCCTTSCCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHHHHHHHCCCHHHHHHHHh-----cCCCCCcCcCCCCCCHH
Confidence 0 88999999999999988876 45789999999999665 678888874 14678999999999999
Q ss_pred HHHHhcCCccc
Q 035924 125 HMRISRVHWKY 135 (138)
Q Consensus 125 HlAa~~g~~~~ 135 (138)
|+|+.+|+.++
T Consensus 255 ~~A~~~g~~~i 265 (276)
T 4hbd_A 255 MVALDAGQSEI 265 (276)
T ss_dssp HHHHHHTCHHH
T ss_pred HHHHHcCCHHH
Confidence 99999998754
No 22
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.82 E-value=5.7e-20 Score=132.74 Aligned_cols=73 Identities=14% Similarity=-0.029 Sum_probs=46.5
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH-------HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHH
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG-------GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRI 128 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~-------~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa 128 (138)
|+..|+.+++++|++.++...+..|..|+||||+|... .++++.|++ .++.++.+|..|+||||+|+
T Consensus 113 A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~l~~A~ 186 (201)
T 3hra_A 113 AAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLME------NGADQSIKDNSGRTAMDYAN 186 (201)
T ss_dssp HHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHH------TTCCTTCCCTTSCCHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHH------CCCCCCccCCCCCCHHHHHH
Confidence 66666666666666665332344566666666666421 455666664 35667777777888888888
Q ss_pred hcCCcc
Q 035924 129 SRVHWK 134 (138)
Q Consensus 129 ~~g~~~ 134 (138)
.+|+.+
T Consensus 187 ~~~~~~ 192 (201)
T 3hra_A 187 QKGYTE 192 (201)
T ss_dssp HHTCHH
T ss_pred HcCCHh
Confidence 777764
No 23
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.82 E-value=9e-20 Score=128.80 Aligned_cols=106 Identities=14% Similarity=-0.025 Sum_probs=89.7
Q ss_pred ccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHHHH
Q 035924 19 HIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARG 90 (138)
Q Consensus 19 ~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A 90 (138)
.+.||||.|+.. |+.+.|+.|++.++.+ +..|. |+..|+.++|++|++.++++ +..|..|+||||+|
T Consensus 2 ~~~t~L~~A~~~---g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 76 (167)
T 3v31_A 2 ANSLSVHQLAAQ---GEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLA 76 (167)
T ss_dssp TTCCCHHHHHHT---TCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred CCcchHHHHHHC---CCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHH
Confidence 367999999999 9999999999976543 22222 99999999999999987776 45789999999999
Q ss_pred HHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 91 FVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 91 ~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+.. .++++.|++. +..+|.+|..|+||||+|+..|+.++
T Consensus 77 ~~~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~~~ 117 (167)
T 3v31_A 77 CSKGYTDIVKMLLDC------GVDVNEYDWNGGTPLLYAVHGNHVKC 117 (167)
T ss_dssp HHHTCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHHC------CCCCCcCCCCCCCHHHHHHHcCCHHH
Confidence 765 7888988874 57799999999999999999998753
No 24
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.82 E-value=1.4e-19 Score=132.67 Aligned_cols=114 Identities=12% Similarity=-0.045 Sum_probs=70.5
Q ss_pred CCCchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc----c---HHHHccCHHHHHHHhccCCccccccCCCC
Q 035924 11 DQSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM----D---GAAAAGNNHFAMEMASLKPWLARKLNHLW 83 (138)
Q Consensus 11 ~~~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~----d---~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G 83 (138)
+-....+..+.||||.|+.. |+.++++.|++.+.++.... . .|+..|+.+++++|++.++...+..|..|
T Consensus 16 ~~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g 92 (223)
T 2f8y_A 16 SLHNQTDRTGETALHLAARY---SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDG 92 (223)
T ss_dssp CTTCCCTTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTC
T ss_pred CcccccCCCCCchHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC
Confidence 33344467788888888888 88888888887655432111 1 17777888888888777664445567777
Q ss_pred chHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 84 LSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 84 ~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
+||||+|+.. .++++.|++. +..+|.+|..|+||||+|+..|+.
T Consensus 93 ~t~L~~A~~~~~~~~~~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~ 138 (223)
T 2f8y_A 93 TTPLILAARLAVEGMLEDLINS------HADVNAVDDLGKSALHWAAAVNNV 138 (223)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHT------TCCTTCBCTTSCBHHHHHHHTTCH
T ss_pred CcHHHHHHHhCcHHHHHHHHHc------CCCCcCcCCCCCcHHHHHHHcCCH
Confidence 7777777443 4455555542 334455555555555555555543
No 25
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.82 E-value=7.2e-20 Score=131.01 Aligned_cols=111 Identities=9% Similarity=0.018 Sum_probs=68.5
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
.+..+..+.||||.|+.. |+.++++.|++.+.++.... ..|+..|+.++|++|++.++++ +..|..|+|
T Consensus 32 ~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t 107 (179)
T 3f6q_A 32 LNQGDDHGFSPLHWACRE---GRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNV 107 (179)
T ss_dssp TTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred ccccCCCCCCHHHHHHHc---CcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCC
Confidence 445566666777777777 77777777776554331110 0167777777777777666554 345667777
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
|||+|... .++++.|++ .++.++.+|..|+||||+|+..++.
T Consensus 108 ~L~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~ 151 (179)
T 3f6q_A 108 PLHYACFWGQDQVAEDLVA------NGALVSICNKYGEMPVDKAKAPLRE 151 (179)
T ss_dssp HHHHHHHTTCHHHHHHHHH------TTCCSSBCCTTSCCGGGGSCHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHH------CCCCcchhccCCCCcHHHHHHHHHH
Confidence 77777543 456666664 2456677777777777777665543
No 26
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.81 E-value=1.1e-19 Score=134.14 Aligned_cols=118 Identities=9% Similarity=0.002 Sum_probs=90.0
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-----------------cH---HHHccCHHHHHHHhccCC
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-----------------DG---AAAAGNNHFAMEMASLKP 73 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-----------------d~---Aa~~G~~~~v~~Ll~~~~ 73 (138)
+..+..+.||||.|+.. |+.++++.|++.++++.... .. |+..|+.++|++|++.++
T Consensus 69 ~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 145 (232)
T 2rfa_A 69 TSELYEGQTALHIAVIN---QNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGA 145 (232)
T ss_dssp CSTTTTTCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTC
T ss_pred cccCCCCcCHHHHHHHc---CCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 45667899999999999 99999999999876543211 11 999999999999999988
Q ss_pred ccccccCCCCchHHHHHHHH--HHH----HHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 74 WLARKLNHLWLSPHARGFVG--GIA----IDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 74 ~~~~~~d~~G~TpLH~A~~~--~~~----v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
++ +.+|..|+||||+|+.. .++ ++.|++.........+.+.+|..|+||||+|+..|+.++
T Consensus 146 ~~-~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~ 212 (232)
T 2rfa_A 146 DI-RAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVM 212 (232)
T ss_dssp CT-TCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHH
T ss_pred CC-CCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHHHcCCHHH
Confidence 76 46799999999999543 333 466665322111122337999999999999999998764
No 27
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.81 E-value=7e-20 Score=137.50 Aligned_cols=116 Identities=11% Similarity=-0.059 Sum_probs=90.4
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc---------------cH------HHHccCHHHHHHHhc---c
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM---------------DG------AAAAGNNHFAMEMAS---L 71 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~---------------d~------Aa~~G~~~~v~~Ll~---~ 71 (138)
.+..+.||||.|+.. |+.++|+.||+.+.++.... +. ||..|+.++|++|++ .
T Consensus 89 ~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 165 (260)
T 3jxi_A 89 VYYRGQTALHIAIER---RCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK 165 (260)
T ss_dssp SSEESBCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred cccCCCCHHHHHHHc---CCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence 345789999999999 99999999999876553221 11 999999999999999 6
Q ss_pred CCccccccCCCCchHHHHHHHH-----------HHHHHHHHHHhhhc-CcccccccccCCCCcHHHHHHhcCCccc
Q 035924 72 KPWLARKLNHLWLSPHARGFVG-----------GIAIDVLFGWLRLS-NKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 72 ~~~~~~~~d~~G~TpLH~A~~~-----------~~~v~~Ll~~~~~~-~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+.++ +.+|..|+||||+|+.. .++++.|++..... .....++.+|..|+||||+|+..|+.++
T Consensus 166 ga~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~ 240 (260)
T 3jxi_A 166 QADL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240 (260)
T ss_dssp CCCT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCCC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHH
Confidence 6665 46799999999999742 46778888754321 1112237899999999999999998764
No 28
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.81 E-value=1.3e-19 Score=126.71 Aligned_cols=106 Identities=12% Similarity=-0.030 Sum_probs=88.7
Q ss_pred cCcHHHHHHhcCCCCCHHHHHHHHhcCCccccccc------HHHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH
Q 035924 20 IYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMD------GAAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG 93 (138)
Q Consensus 20 ~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d------~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~ 93 (138)
+.||||.|++. |+.++|+.|++.++.+..... .|+..|+.+++++|++.++++ +..|..|+||||+|+..
T Consensus 2 ~~~~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~ 77 (153)
T 1awc_B 2 LGKKLLEAARA---GQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAASE 77 (153)
T ss_dssp HHHHHHHHHHH---TCHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHHH
T ss_pred ccHHHHHHHHc---CCHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHHc
Confidence 35899999999 999999999998765432111 199999999999999988776 45789999999999765
Q ss_pred --HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 94 --GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 94 --~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
.++++.|++ .+..+|.+|..|+||||+|+..|+.++
T Consensus 78 ~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~ 115 (153)
T 1awc_B 78 GHANIVEVLLK------HGADVNAKDMLKMTALHWATEHNHQEV 115 (153)
T ss_dssp TCHHHHHHHHT------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred ChHHHHHHHHH------cCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 678888885 467899999999999999999998753
No 29
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.81 E-value=8.9e-20 Score=128.60 Aligned_cols=111 Identities=10% Similarity=-0.013 Sum_probs=91.5
Q ss_pred hhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 15 FEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 15 ~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
..++.+.||||.|++. |+++.++.|++..+......+. |+..|+.++|++|++.++++ +..|..|+||
T Consensus 3 ~~~~~~~~~l~~A~~~---g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 78 (165)
T 3twr_A 3 MGNSEADRQLLEAAKA---GDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVP 78 (165)
T ss_dssp ---CHHHHHHHHHHHH---TCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CCcchhhHHHHHHHHh---CCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCH
Confidence 4567788999999999 9999999999865533333222 99999999999999988876 4679999999
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
||+|+.. .++++.|++ .++.+|.+|..|+||||+|+..|+.++
T Consensus 79 L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~ 123 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVK------HGAVVNVADLWKFTPLHEAAAKGKYEI 123 (165)
T ss_dssp HHHHHHTTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHcCcHHHHHHHHh------CCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 9999754 688898886 367899999999999999999998764
No 30
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.81 E-value=1.6e-19 Score=132.23 Aligned_cols=108 Identities=9% Similarity=-0.055 Sum_probs=59.4
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHH
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPH 87 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpL 87 (138)
.+..+.||||.|+.. |+.++++.|++.++...+..+. |+..|+.+++++|++.++++ +..|..|+|||
T Consensus 54 ~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L 129 (223)
T 2f8y_A 54 QDNMGRTPLHAAVSA---DAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSAL 129 (223)
T ss_dssp CCTTSCCHHHHHHHT---TCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHH
T ss_pred cCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHH
Confidence 445566777777777 7777777777655422222211 66666666666666655544 23456666666
Q ss_pred HHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 88 ARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 88 H~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
|+|+.. .++++.|++. ++.+|.+|..|+||||+|+..|+.
T Consensus 130 ~~A~~~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~~ 171 (223)
T 2f8y_A 130 HWAAAVNNVDAAVVLLKN------GANKDMQNNREETPLFLAAREGSY 171 (223)
T ss_dssp HHHHHTTCHHHHHHHHHT------TCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred HHHHHcCCHHHHHHHHHc------CCCCCCcCCCCcCHHHHHHHcCCH
Confidence 666432 3445555431 344455555555555555555543
No 31
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.80 E-value=5.7e-20 Score=135.67 Aligned_cols=109 Identities=12% Similarity=-0.011 Sum_probs=91.3
Q ss_pred hhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhcc-CCccccccCCCCch
Q 035924 15 FEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASL-KPWLARKLNHLWLS 85 (138)
Q Consensus 15 ~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~-~~~~~~~~d~~G~T 85 (138)
..+..+.||||.||.. |+.++|+.||+.+.++. ..|. ||..|+.++|++|++. +.++ +..|..|+|
T Consensus 68 ~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~t 142 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKR---GNLSWLRECLDNRVGVN-GLDKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDT 142 (222)
T ss_dssp HHEEEESCHHHHHHHH---TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCC
T ss_pred cccccccccccccccc---CcHHHHHHHHhCCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCC
Confidence 3466789999999999 99999999999776542 2222 9999999999999998 5554 567999999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
|||+|+.. .++++.|++. ++.++.+|.+|+||||+|+..|+.+
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~------ga~~~~~~~~g~t~l~~A~~~~~~~ 187 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAK------GARTDLRNIEKKLAFDMATNAACAS 187 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHH------TCCSCCCCTTSCCHHHHCCSHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHc------CCCCccccCCCCCHHHHhcchhHHH
Confidence 99999765 7888999874 6789999999999999999887654
No 32
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.80 E-value=8.5e-20 Score=131.62 Aligned_cols=108 Identities=16% Similarity=0.041 Sum_probs=88.9
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHH
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPH 87 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpL 87 (138)
.+..+.||||.|++. |+.+.++.||+ +.++ +..|. |+..|+.++|++|++.++++....+..|+|||
T Consensus 40 ~~~~g~t~L~~A~~~---g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL 114 (183)
T 3deo_A 40 VVSEYETPWWTAARK---ADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTAL 114 (183)
T ss_dssp HHHHHHHHHHHHHHT---TCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHH
T ss_pred CCCCCCCHHHHHHHc---CCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHH
Confidence 466788999999999 99999999998 4433 22222 99999999999999998887543338999999
Q ss_pred HHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 88 ARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 88 H~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
|+|+.. .++++.|++. ++.+|.+|..|+||||+|+..++.+
T Consensus 115 ~~A~~~~~~~~v~~Ll~~------ga~~~~~d~~g~tpl~~A~~~~~~~ 157 (183)
T 3deo_A 115 HMAAGYVRPEVVEALVEL------GADIEVEDERGLTALELAREILKTT 157 (183)
T ss_dssp HHHHHTTCHHHHHHHHHH------TCCTTCCCTTSCCHHHHHHHHHHTC
T ss_pred HHHHhcCcHHHHHHHHHc------CCCCcCCCCCCCCHHHHHHHhccCc
Confidence 999654 6888998874 6789999999999999999876553
No 33
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.80 E-value=1.2e-19 Score=136.51 Aligned_cols=76 Identities=9% Similarity=-0.095 Sum_probs=51.5
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
...+..+.||||.|+.. |+.++|+.|++.+.++.... ..|+..|+.+++++|++.++...+..|..|+||
T Consensus 51 ~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~ 127 (253)
T 1yyh_A 51 NQTDRTGETALHLAARY---SRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTP 127 (253)
T ss_dssp -CCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCH
T ss_pred cccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcH
Confidence 34467788888888888 88888888888755432111 117777888888887776653334567777777
Q ss_pred HHHHHH
Q 035924 87 HARGFV 92 (138)
Q Consensus 87 LH~A~~ 92 (138)
||+|+.
T Consensus 128 L~~A~~ 133 (253)
T 1yyh_A 128 LILAAR 133 (253)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 777743
No 34
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.80 E-value=1.7e-19 Score=136.67 Aligned_cols=116 Identities=7% Similarity=-0.119 Sum_probs=89.9
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccccc---------------H------HHHccCHHHHHHHhc---c
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMD---------------G------AAAAGNNHFAMEMAS---L 71 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d---------------~------Aa~~G~~~~v~~Ll~---~ 71 (138)
.+..+.||||.|+.. |+.++|+.||+.++++..... . |+..|+.++|++|++ .
T Consensus 97 ~d~~g~tpL~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ 173 (273)
T 2pnn_A 97 SYYKGQTALHIAIER---RNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQ 173 (273)
T ss_dssp TTTTTCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred ccCCCCCHHHHHHHc---CCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccC
Confidence 456799999999999 999999999998765532221 1 999999999999999 6
Q ss_pred CCccccccCCCCchHHHHHHHH-----------HHHHHHHHHHhhhcC-cccccccccCCCCcHHHHHHhcCCccc
Q 035924 72 KPWLARKLNHLWLSPHARGFVG-----------GIAIDVLFGWLRLSN-KEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 72 ~~~~~~~~d~~G~TpLH~A~~~-----------~~~v~~Ll~~~~~~~-~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+.++ +.+|..|+||||+|+.. .++++.|++...... ....++.+|..|+||||+|+..|+.++
T Consensus 174 gad~-~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~i 248 (273)
T 2pnn_A 174 PADI-SARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGV 248 (273)
T ss_dssp CCCT-TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCCc-eeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHH
Confidence 6665 46799999999999652 467788887543211 111235699999999999999998764
No 35
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.80 E-value=1.2e-19 Score=136.55 Aligned_cols=73 Identities=16% Similarity=-0.012 Sum_probs=41.2
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
|+..|+.++|++|++.++++ +..|..|+||||+|... .++++.|++ .++.++.+|..|+||||+|+.+|+.
T Consensus 164 A~~~~~~~~v~~Ll~~ga~~-~~~~~~g~tpL~~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~g~~ 236 (253)
T 1yyh_A 164 AAAVNNVDAAVVLLKNGANK-DMQNNREETPLFLAAREGSYETAKVLLD------HFANRDITDHMDRLPRDIAQERMHH 236 (253)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHH------cCCCccccccCCCCHHHHHHHcCCH
Confidence 55555555555555554443 23455555555555432 455555554 2455666677777777777777665
Q ss_pred cc
Q 035924 134 KY 135 (138)
Q Consensus 134 ~~ 135 (138)
++
T Consensus 237 ~i 238 (253)
T 1yyh_A 237 DI 238 (253)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 36
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.80 E-value=1.7e-19 Score=128.13 Aligned_cols=112 Identities=14% Similarity=0.105 Sum_probs=89.9
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCc
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWL 84 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~ 84 (138)
.......+.++|+.||+. |+.++|+.|++.+.++. ..|. |+..|+.++|++|++.++++ +..|..|+
T Consensus 7 ~~~~~~~~~~~l~~A~~~---g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 81 (169)
T 2y1l_E 7 HHHHGSDLGKKLLEAARA---GRDDEVRILMANGADVN-AEDASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGM 81 (169)
T ss_dssp ------CHHHHHHHHHHH---TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred cccCCCcccchHHHHHHc---CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCC
Confidence 344455667999999999 99999999999876542 2221 99999999999999988776 45789999
Q ss_pred hHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 85 SPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 85 TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
||||+|+.. .++++.|++ .++.+|.+|..|+||||+|+..|+.++
T Consensus 82 t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~ 128 (169)
T 2y1l_E 82 TPLRLAALFGHLEIVEVLLK------NGADVNANDMEGHTPLHLAAMFGHLEI 128 (169)
T ss_dssp CHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 999999754 678888886 367899999999999999999998653
No 37
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.80 E-value=1.4e-19 Score=136.11 Aligned_cols=73 Identities=11% Similarity=-0.010 Sum_probs=46.3
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
|+..|+.++|++|++.++++....+..|+||||+|+.. .++++.|++ .++.+|.+|..|+||||+|+.+|+.
T Consensus 165 A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~------~gad~~~~d~~g~tpL~~A~~~~~~ 238 (282)
T 1oy3_D 165 AVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLK------AGADPTARMYGGRTPLGSALLRPNP 238 (282)
T ss_dssp HHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHTSSCH
T ss_pred HHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHH------cCCCCcccccCCCCHHHHHHHcCCc
Confidence 66666666666666665554322223466666666433 566666665 3566777888888888888877775
Q ss_pred c
Q 035924 134 K 134 (138)
Q Consensus 134 ~ 134 (138)
+
T Consensus 239 ~ 239 (282)
T 1oy3_D 239 I 239 (282)
T ss_dssp H
T ss_pred H
Confidence 4
No 38
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.80 E-value=6.7e-20 Score=131.19 Aligned_cols=108 Identities=13% Similarity=-0.002 Sum_probs=89.4
Q ss_pred hccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHHH
Q 035924 18 RHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHAR 89 (138)
Q Consensus 18 ~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~ 89 (138)
..+.++||.|+.. |+.+.|+.|++..+..++..+. ||..|+.++|++|++.++++ +..|..|+||||+
T Consensus 3 ~~~~~~l~~A~~~---g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 78 (179)
T 3f6q_A 3 PEFMDDIFTQCRE---GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHL 78 (179)
T ss_dssp ----CCHHHHHHH---TCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred HHHHHHHHHHHHc---CCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHH
Confidence 3467999999999 9999999999986654444333 99999999999999988776 4579999999999
Q ss_pred HHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 90 GFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 90 A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|+.. .++++.|++ .++.+|.+|..|+||||+|+..|+.++
T Consensus 79 A~~~~~~~~v~~Ll~------~g~~~~~~d~~g~t~L~~A~~~~~~~~ 120 (179)
T 3f6q_A 79 AASHGHRDIVQKLLQ------YKADINAVNEHGNVPLHYACFWGQDQV 120 (179)
T ss_dssp HHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHH------cCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 9764 688899886 367899999999999999999998753
No 39
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.80 E-value=1.2e-19 Score=127.24 Aligned_cols=110 Identities=11% Similarity=0.007 Sum_probs=74.7
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
+..+..+.||||.|+. |+.++++.|++.+.++.... ..|+..|+.+++++|++.++++ +..|..|+||
T Consensus 32 ~~~~~~g~t~L~~A~~----~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 106 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL----GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADV-NIEDNEGNLP 106 (162)
T ss_dssp TCCCTTSCCHHHHCCS----SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred cccCccCccHHHHHHc----CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCH
Confidence 3445667777777654 67777777777654432111 1177888888888888777665 3467788888
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCccc-ccccccCCCCcHHHHHHhcCCcc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQ-ILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~-~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
||+|+.. .++++.|++. ++ .++.+|..|+||||+|+.+|+.+
T Consensus 107 L~~A~~~~~~~~v~~Ll~~------g~~~~~~~~~~g~t~l~~A~~~~~~~ 151 (162)
T 1ihb_A 107 LHLAAKEGHLRVVEFLVKH------TASNVGHRNHKGDTACDLARLYGRNE 151 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHH------SCCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHHc------cCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 8888543 5677777764 23 36788888888888888888765
No 40
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.80 E-value=3.1e-19 Score=130.92 Aligned_cols=72 Identities=11% Similarity=-0.021 Sum_probs=39.9
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcC--CcccccccH--------HHHccCHHHHHHHhccC--CccccccCCCC
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVED--PHVLERMDG--------AAAAGNNHFAMEMASLK--PWLARKLNHLW 83 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~--~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~--~~~~~~~d~~G 83 (138)
.+..+.||||.|+.. |+.++++.|++.+ +++....+. |+..|+.+++++|++.+ +++ +..|..|
T Consensus 32 ~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g 107 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSF---QAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQG 107 (228)
T ss_dssp CCTTSCCHHHHHHHT---TCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTC
T ss_pred CCCCCCCHHHHHHHc---CCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCC
Confidence 455566666666666 6666666666655 332221111 66666666666666554 332 3345566
Q ss_pred chHHHHHH
Q 035924 84 LSPHARGF 91 (138)
Q Consensus 84 ~TpLH~A~ 91 (138)
+||||+|.
T Consensus 108 ~t~L~~A~ 115 (228)
T 2dzn_A 108 VTCLHLAV 115 (228)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 66666663
No 41
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.80 E-value=9e-20 Score=136.68 Aligned_cols=105 Identities=10% Similarity=-0.087 Sum_probs=59.4
Q ss_pred ccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHHHH
Q 035924 19 HIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARG 90 (138)
Q Consensus 19 ~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A 90 (138)
.+.||||.|+.. |+.++|+.||+.++++ +..|. ||..|+.++|++|++.++++ +..|..|+||||+|
T Consensus 36 ~~~t~L~~A~~~---g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~A 110 (239)
T 1ycs_B 36 LPLALLLDSSLE---GEFDLVQRIIYEVDDP-SLPNDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHCA 110 (239)
T ss_dssp -CHHHHHHHHHH---TCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHH
T ss_pred hhhHHHHHHHHc---CCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHH
Confidence 345666666666 6666666666654432 11111 66666666666666665554 34566666666666
Q ss_pred HHH--HHHHHHHHHHhhhcCcccccccccCCCC-cHHHHH--HhcCCcc
Q 035924 91 FVG--GIAIDVLFGWLRLSNKEQILKWKDDDGN-TALHMR--ISRVHWK 134 (138)
Q Consensus 91 ~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~-TpLHlA--a~~g~~~ 134 (138)
+.. .++++.|++ .++.+|.+|..|. ||||+| +..|+.+
T Consensus 111 ~~~~~~~~v~~Ll~------~ga~~~~~~~~~~~t~l~~a~~~~~g~~~ 153 (239)
T 1ycs_B 111 ASCNNVQVCKFLVE------SGAAVFAMTYSDMQTAADKCEEMEEGYTQ 153 (239)
T ss_dssp HHTTCHHHHHHHHH------TTCCTTCCCSSSCCCHHHHCCSSSTTCCC
T ss_pred HHcCCHHHHHHHHH------cCCCcceecCCCCcchHHHHHHhhhccHH
Confidence 433 455666654 2455666665555 666666 4555544
No 42
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.79 E-value=1.9e-19 Score=125.57 Aligned_cols=106 Identities=10% Similarity=0.040 Sum_probs=86.8
Q ss_pred cCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH-------HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHH
Q 035924 20 IYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG-------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFV 92 (138)
Q Consensus 20 ~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~-------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~ 92 (138)
+.||||.|+.. |+.+.++.|++..+...+..+. .|..|+.++|++|++.++++ +..|..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 2 AGDRLSGAAAR---GDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHHH---TCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cchHHHHHHHh---CCHHHHHHHHHhhCcCccccCCCCCcHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHH
Confidence 35899999999 9999999999873222222222 57789999999999988776 4679999999999975
Q ss_pred H--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 93 G--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 93 ~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
. .++++.|++ .+..+|.+|..|+||||+|+..|+.++
T Consensus 78 ~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~ 116 (156)
T 1bd8_A 78 TGFLDTLKVLVE------HGADVNVPDGTGALPIHLAVQEGHTAV 116 (156)
T ss_dssp TTCHHHHHHHHH------TTCCSCCCCTTSCCHHHHHHHHTCHHH
T ss_pred cCcHHHHHHHHH------cCCCCCCcCCCCCcHHHHHHHhChHHH
Confidence 4 678888886 367899999999999999999998753
No 43
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.79 E-value=5.7e-19 Score=127.46 Aligned_cols=113 Identities=12% Similarity=-0.076 Sum_probs=89.6
Q ss_pred CCchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc----c---HHHHccCHHHHHHHhccCCccccccCCCCc
Q 035924 12 QSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM----D---GAAAAGNNHFAMEMASLKPWLARKLNHLWL 84 (138)
Q Consensus 12 ~~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~----d---~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~ 84 (138)
..+..+..+.||||.|+.. |+.++++.|++.+.++.... . .|+..|+.+++++|++..+...+..|..|+
T Consensus 31 ~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~ 107 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHN---NDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGG 107 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSC
T ss_pred CCCCCCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCC
Confidence 3455677889999999999 99999999999766542211 1 199999999999999655544456789999
Q ss_pred hHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 85 SPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 85 TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
||||+|+.. .++++.|++.. ...+|.+|..|+||||+|+..|+
T Consensus 108 t~L~~A~~~~~~~~v~~Ll~~g-----~~~~~~~~~~g~t~L~~A~~~~~ 152 (201)
T 3hra_A 108 NALIPAAEKGHIDNVKLLLEDG-----REDIDFQNDFGYTALIEAVGLRE 152 (201)
T ss_dssp CSHHHHHHTTCHHHHHHHHHHC-----CCCTTCCCTTSCCHHHHHHHSSC
T ss_pred cHHHHHHHcCCHHHHHHHHHcC-----CCCcCCCCCCCCCHHHHHHHhcc
Confidence 999999654 67888888742 26789999999999999999887
No 44
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.79 E-value=4.4e-19 Score=124.26 Aligned_cols=105 Identities=15% Similarity=0.104 Sum_probs=87.3
Q ss_pred ccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHHHH
Q 035924 19 HIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARG 90 (138)
Q Consensus 19 ~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A 90 (138)
...||||.|+.. |+.++++.|++.++++ +..+. |+. |+.+++++|++.++++ +..|..|+||||+|
T Consensus 4 ~~~~~L~~A~~~---g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 4 PWGNELASAAAR---GDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDA 77 (162)
T ss_dssp -CHHHHHHHHHH---TCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred hHhhHHHHHHHc---CCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 356999999999 9999999999877654 22222 666 9999999999988776 45799999999999
Q ss_pred HHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 91 FVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 91 ~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+.. .++++.|++ .+..+|.+|..|+||||+|+..|+.++
T Consensus 78 ~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~ 118 (162)
T 1ihb_A 78 ARAGFLDTLQTLLE------FQADVNIEDNEGNLPLHLAAKEGHLRV 118 (162)
T ss_dssp HHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 765 688898886 367899999999999999999998753
No 45
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.79 E-value=6.2e-19 Score=129.32 Aligned_cols=108 Identities=11% Similarity=0.043 Sum_probs=80.8
Q ss_pred cCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccC--CccccccCCCCchHHHH
Q 035924 20 IYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLK--PWLARKLNHLWLSPHAR 89 (138)
Q Consensus 20 ~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~--~~~~~~~d~~G~TpLH~ 89 (138)
|.||||.|++. |+.++|+.|++.++......|. |+..|+.+++++|++.+ +++....|..|+||||+
T Consensus 2 g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 2 SNYPLHQACME---NEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHI 78 (228)
T ss_dssp -CCHHHHHHHT---TCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHH
T ss_pred CccHHHHHHHh---CCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHH
Confidence 67999999999 9999999999988776553333 99999999999999988 55544378999999999
Q ss_pred HHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 90 GFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 90 A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
|... .++++.|++.. .+..++.+|..|+||||+|+..|+.+
T Consensus 79 A~~~~~~~~~~~Ll~~g----~~~~~~~~~~~g~t~L~~A~~~~~~~ 121 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRP----LKPDLNKITNQGVTCLHLAVGKKWFE 121 (228)
T ss_dssp HHHHCCHHHHHHHHSSS----SCCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHhCC----CCcccccCCcCCCCHHHHHHHcCCHh
Confidence 9655 56777776421 12455666666666666666665543
No 46
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.79 E-value=3.9e-19 Score=131.88 Aligned_cols=113 Identities=12% Similarity=-0.008 Sum_probs=69.3
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCc-----cccccC
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPW-----LARKLN 80 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~-----~~~~~d 80 (138)
.+..+..+.||||.|+.. |+.++++.|++.+.++.... ..|+..|+.+++++|++.++. .....|
T Consensus 38 ~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~ 114 (236)
T 1ikn_D 38 LNFQNNLQQTPLHLAVIT---NQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATN 114 (236)
T ss_dssp CCCCCTTCCCHHHHHHHT---TCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCC
T ss_pred hhccCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccC
Confidence 344556677777777777 77777777776654331110 017777777777777766532 234456
Q ss_pred CCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccC-CCCcHHHHHHhcCCcc
Q 035924 81 HLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDD-DGNTALHMRISRVHWK 134 (138)
Q Consensus 81 ~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~-~G~TpLHlAa~~g~~~ 134 (138)
..|+||||+|+.. .++++.|++. ++.+|.+|. .|+||||+|+..|+.+
T Consensus 115 ~~g~t~L~~A~~~~~~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~ 165 (236)
T 1ikn_D 115 YNGHTCLHLASIHGYLGIVELLVSL------GADVNAQEPCNGRTALHLAVDLQNPD 165 (236)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHc------CCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence 6677777777543 4566666653 455666665 6777777777666653
No 47
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.79 E-value=6.8e-19 Score=129.55 Aligned_cols=112 Identities=13% Similarity=0.015 Sum_probs=75.4
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
.+..+..+.||||.|+.. |+.++++.|++.+.++.... ..|+..|+.+++++|++.++++ +..|..|+|
T Consensus 33 ~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t 108 (231)
T 3aji_A 33 ATRTDQDSRTALHWACSA---GHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCT 108 (231)
T ss_dssp GGCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred hhcCCCCCCCHHHHHHHc---CcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCC
Confidence 344566677777777777 77777777777654432111 1177777777777777776665 345777777
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
|||+|... .++++.|++ .+..++.+|..|+||||+|+..|+.+
T Consensus 109 ~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~ 153 (231)
T 3aji_A 109 PLHYAASKNRHEIAVMLLE------GGANPDAKDHYDATAMHRAAAKGNLK 153 (231)
T ss_dssp HHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCcHHHHHHHcCCHH
Confidence 77777543 566677665 35567778888888888888887764
No 48
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.79 E-value=9.2e-19 Score=128.85 Aligned_cols=111 Identities=14% Similarity=0.083 Sum_probs=84.2
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
+..+..+.||||.|+.. |+.++++.|++.++++.... ..|+..|+.+++++|++.+.++ +..|..|+||
T Consensus 67 ~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~ 142 (231)
T 3aji_A 67 NDKDDAGWSPLHIAASA---GXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP-DAKDHYDATA 142 (231)
T ss_dssp CCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CCcCCCCCCHHHHHHHc---CHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCcH
Confidence 44566788999999999 99999999998765542111 1188889999999988877665 3568888999
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
||+|+.. .++++.|++ .+..+|.+|..|+||||+|+..|+.+
T Consensus 143 L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~ 186 (231)
T 3aji_A 143 MHRAAAKGNLKMVHILLF------YKASTNIQDTEGNTPLHLACDEERVE 186 (231)
T ss_dssp HHHHHHHTCHHHHHHHHH------TTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHcCCHHHHHHHHh------cCCCccccCCCCCCHHHHHHHCCCHH
Confidence 9998654 677777775 35678888888888888888888764
No 49
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.79 E-value=2.5e-19 Score=137.73 Aligned_cols=113 Identities=5% Similarity=-0.145 Sum_probs=95.1
Q ss_pred CCchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH------HHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 12 QSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG------AAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 12 ~~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
..+..|..|.||||.|+.. |+.++|+.|++.++++... +. ||..|+.++|++|++.++++ +..|..|+|
T Consensus 23 ~~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t 97 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIAD---NNVRLVCTLLNAGALKNLL-ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNT 97 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTGGGSCC-TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred CCCccCCCCCCHHHHHHHc---CCHHHHHHHHhCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCc
Confidence 3566788999999999999 9999999999987655322 32 99999999999999998876 457999999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCC-CcHHHHHHhcCCccc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDG-NTALHMRISRVHWKY 135 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G-~TpLHlAa~~g~~~~ 135 (138)
|||+|+.. .++++.|++. ++.++.+|..| .||||+|+..|+.++
T Consensus 98 ~L~~A~~~g~~~~v~~Ll~~------ga~~~~~~~~g~~t~L~~A~~~~~~~~ 144 (285)
T 3kea_A 98 ALYYAVDSGNMQTVKLFVKK------NWRLMFYGKTGWKTSFYHAVMLNDVSI 144 (285)
T ss_dssp HHHHHHHTTCHHHHHHHHHH------CGGGGGCSSSGGGSHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHhc------CCCCCccCCCCCCCHHHHHHHcCCHHH
Confidence 99999654 6888998874 67789999999 799999999998653
No 50
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.78 E-value=5.9e-19 Score=132.75 Aligned_cols=49 Identities=16% Similarity=0.098 Sum_probs=24.5
Q ss_pred CCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCC-CCcHHHHHHhcCCcc
Q 035924 80 NHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDD-GNTALHMRISRVHWK 134 (138)
Q Consensus 80 d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~-G~TpLHlAa~~g~~~ 134 (138)
|..|+||||+|+.. .++++.|++. ++.+|.+|.. |+||||+|+..|+.+
T Consensus 155 ~~~g~t~L~~A~~~g~~~~v~~Ll~~------g~~~~~~~~~~g~tpL~~A~~~~~~~ 206 (282)
T 1oy3_D 155 NYDGHTPLHVAVIHKDAEMVRLLRDA------GADLNKPEPTCGRTPLHLAVEAQAAS 206 (282)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHH------TCCTTCCCTTTCCCHHHHHHHTTCHH
T ss_pred CCCCcCHHHHHHHcCCHHHHHHHHHc------CCCCCCCCCCCCcCHHHHHHHcCCHH
Confidence 44455555554332 3444555542 3445555533 666666666665543
No 51
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.78 E-value=1.1e-18 Score=128.91 Aligned_cols=24 Identities=17% Similarity=0.245 Sum_probs=12.0
Q ss_pred ccccccccCCCCcHHHHHHhcCCc
Q 035924 110 EQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 110 ~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
+..+|.+|..|+||||+|+..|+.
T Consensus 167 g~~~~~~~~~g~t~L~~A~~~~~~ 190 (237)
T 3b7b_A 167 KCDLHAVNIHGDSPLHIAARENRY 190 (237)
T ss_dssp TCCTTCCCTTCCCHHHHHHHTTCH
T ss_pred CCCCCCcCCCCCCHHHHHHHhCCH
Confidence 344455555555555555555443
No 52
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.78 E-value=3.4e-19 Score=132.18 Aligned_cols=112 Identities=7% Similarity=-0.108 Sum_probs=92.7
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCc-----ccccccH--------HHHccCHHHHHHHhccCCccccccC
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPH-----VLERMDG--------AAAAGNNHFAMEMASLKPWLARKLN 80 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~-----~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d 80 (138)
+..+..+.||||.|+.. |+.++++.|++.++. .++..+. |+..|+.++|++|++.++++. ..|
T Consensus 72 ~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~-~~~ 147 (236)
T 1ikn_D 72 ELRDFRGNTPLHLACEQ---GCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVN-AQE 147 (236)
T ss_dssp CCCCTTCCCHHHHHHHH---TCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTT-CCC
T ss_pred CCcCCCCCCHHHHHHHc---CCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC-CCC
Confidence 44567899999999999 999999999997642 1222222 999999999999999988874 456
Q ss_pred C-CCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 81 H-LWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 81 ~-~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
. .|+||||+|+.. .++++.|++ .++.++.+|..|+||||+|+.+|+.++
T Consensus 148 ~~~g~tpL~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~tpl~~A~~~~~~~~ 199 (236)
T 1ikn_D 148 PCNGRTALHLAVDLQNPDLVSLLLK------CGADVNRVTYQGYSPYQLTWGRPSTRI 199 (236)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHT------TTCCSCCCCTTCCCGGGGCTTSSCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCcccCCCCCHHHHHHccCchHH
Confidence 5 999999999654 688888885 478899999999999999999998754
No 53
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.78 E-value=1.9e-19 Score=138.19 Aligned_cols=108 Identities=6% Similarity=-0.011 Sum_probs=91.7
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
...+..+.||||.|+.. |+.++++.|++.++++- ..|. ||..|+.++|++|++.++++ +..|..|+|
T Consensus 113 ~~~~~~g~t~l~~a~~~---~~~~~~~~Ll~~g~~~n-~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadv-n~~~~~g~t 187 (269)
T 4b93_B 113 GARNADQAVPLHLACQQ---GHFQVVKCLLDSNAKPN-KKDLSGNTPLIYACSGGHHELVALLLQHGASI-NASNNKGNT 187 (269)
T ss_dssp TCCCTTCCCHHHHHHHH---TCHHHHHHHHHTTCCSC-CCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCT-TCBCTTSCB
T ss_pred CccCCCCCCcccccccc---ChHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCC-CccccCCCc
Confidence 34566789999999999 99999999999876542 2222 99999999999999998876 467999999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
|||+|+.. .++++.|++ .++++|.+|.+|+||||+|+.+|+
T Consensus 188 ~Lh~A~~~g~~~~v~~Ll~------~Gad~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 188 ALHEAVIEKHVFVVELLLL------HGASVQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHHHHHTTCHHHHHHHHH------TTCCSCCCCTTSCCSGGGSCTTCH
T ss_pred HHHHHHHcCCHHHHHHHHH------CCCCCCCcCCCCCCHHHHHHhCCc
Confidence 99999764 788899986 378899999999999999998876
No 54
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.78 E-value=3.4e-19 Score=130.35 Aligned_cols=112 Identities=13% Similarity=-0.035 Sum_probs=88.0
Q ss_pred chhhhccCcHHHHHHhcCCCCCH----HHHHHHHhcCCcccccccH-------HHHccC------HHHHHHHhccCCccc
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRP----EALYSMFVEDPHVLERMDG-------AAAAGN------NHFAMEMASLKPWLA 76 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~----~~v~~Ll~~~~~~l~~~d~-------Aa~~G~------~~~v~~Ll~~~~~~~ 76 (138)
...+..|+||||.|+.. |+. ++++.||+.+.++-..... |+..|+ .++|++|++.++++
T Consensus 32 ~~~~~~g~T~Lh~A~~~---~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadi- 107 (186)
T 3t8k_A 32 DKESVLKSNILYDVLRN---NNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADI- 107 (186)
T ss_dssp CHHHHHTTTHHHHHTTC---SCHHHHHHHHHHHHHTTCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCS-
T ss_pred cccccCCCCHHHHHHHc---CCcchHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCC-
Confidence 34447799999999999 986 4899999987665322111 888887 68899999998887
Q ss_pred cccCCCCc-hHHHHHHH-------HHHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 77 RKLNHLWL-SPHARGFV-------GGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 77 ~~~d~~G~-TpLH~A~~-------~~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
+.+|..|+ ||||+|.. ..+++++|+. ..++++|.+|..|+||||+|+..|+.+
T Consensus 108 n~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~-----~~gad~~~~d~~G~TpL~~A~~~~~~~ 168 (186)
T 3t8k_A 108 TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS-----QSGLQLLIKDKWGLTALEFVKRCQKPI 168 (186)
T ss_dssp SSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT-----STTCCTTCCCTTSCCHHHHHHTTTCHH
T ss_pred CccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH-----hcCCCCcccCCCCCCHHHHHHHcCCHH
Confidence 46799999 99999954 1456677764 147889999999999999999999865
No 55
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.78 E-value=1.1e-18 Score=132.92 Aligned_cols=112 Identities=13% Similarity=0.050 Sum_probs=77.7
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
+..+..+.||||.|+.. |+.++|+.|++.+.++.... ..|+..|+.++|++|++.++++. ..|..|+||
T Consensus 67 ~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~-~~~~~g~t~ 142 (299)
T 1s70_B 67 NYANVDGLTALHQACID---DNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG-AVNSEGDTP 142 (299)
T ss_dssp TCBCTTCCBHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT-CCCTTSCCH
T ss_pred cccCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC-CcCCCCCCH
Confidence 34566778888888888 88888888888765542111 11888888888888888776653 346666666
Q ss_pred HHHH------------------------------------------------------------HHH--HHHHHHHHHHh
Q 035924 87 HARG------------------------------------------------------------FVG--GIAIDVLFGWL 104 (138)
Q Consensus 87 LH~A------------------------------------------------------------~~~--~~~v~~Ll~~~ 104 (138)
||+| +.. .++++.|+
T Consensus 143 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll--- 219 (299)
T 1s70_B 143 LDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI--- 219 (299)
T ss_dssp HHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHH---
T ss_pred HHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHH---
Confidence 6655 211 23344444
Q ss_pred hhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 105 RLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 105 ~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
..++.+|.+|..|+||||+|+..|+.++
T Consensus 220 ---~~g~d~~~~d~~g~tpL~~A~~~~~~~~ 247 (299)
T 1s70_B 220 ---QARYDVNIKDYDGWTPLHAAAHWGKEEA 247 (299)
T ss_dssp ---TTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred ---HcCCCCCCcCCCCCcHHHHHHhcCCHHH
Confidence 2467889999999999999999998653
No 56
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.78 E-value=2.7e-19 Score=140.55 Aligned_cols=111 Identities=9% Similarity=-0.124 Sum_probs=93.2
Q ss_pred hhhhccCcHHHHHHhcCCCC--CHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCcc----ccccC
Q 035924 15 FEQRHIYNYIPTFSLIITML--RPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWL----ARKLN 80 (138)
Q Consensus 15 ~~~~~~~t~Lh~Aa~~~~~G--~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~----~~~~d 80 (138)
..+..+.||||.|+.. | +.++|+.|++.+.++. ..|. |+..|+.++|++|++.+++. .+..|
T Consensus 133 ~~~~~g~t~L~~A~~~---g~~~~~~v~~Ll~~ga~~~-~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~ 208 (364)
T 3ljn_A 133 VKHCKGQTALHWCVGL---GPEYLEMIKILVQLGASPT-AKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYAN 208 (364)
T ss_dssp EEEESCCCHHHHHHHS---CGGGHHHHHHHHHHTCCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCC
T ss_pred cCCCCCCCHHHHHHHc---CCchHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccC
Confidence 3677899999999999 9 9999999999765542 2221 99999999999999988772 35679
Q ss_pred CCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 81 HLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 81 ~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
..|+||||+|+.. .++++.|++ .++++|.+|..|+||||+|+..|+.++
T Consensus 209 ~~g~t~L~~A~~~g~~~~v~~Ll~------~gad~~~~d~~g~tpL~~A~~~g~~~~ 259 (364)
T 3ljn_A 209 KQGNSHLHWAILINWEDVAMRFVE------MGIDVNMEDNEHTVPLYLSVRAAMVLL 259 (364)
T ss_dssp TTCCCTTHHHHTTTCHHHHHHHHT------TTCCTTCCCTTSCCHHHHHHHTCCHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCCCCCCCCHHHHHHHhChHHH
Confidence 9999999999654 688899885 478899999999999999999998754
No 57
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.78 E-value=1e-18 Score=132.17 Aligned_cols=107 Identities=9% Similarity=-0.029 Sum_probs=48.6
Q ss_pred hhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccccc-------HHHHccCHHHHHHHhccCCccccccCCCCchHH
Q 035924 15 FEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMD-------GAAAAGNNHFAMEMASLKPWLARKLNHLWLSPH 87 (138)
Q Consensus 15 ~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d-------~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpL 87 (138)
..+..+.||||.|+.. |+.++++.|++.+.++..... .|+..|+.++|++|++.++++. .+.+|+|||
T Consensus 31 ~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~--~~~~g~t~L 105 (261)
T 2xai_A 31 IITADHVSPLHEACLG---GHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ--PESDLASPI 105 (261)
T ss_dssp CCCTTCCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSS--CSCTTCCHH
T ss_pred CcCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC--CCCCCCCHH
Confidence 3444556666666666 666666666655433211100 0555555555555555444432 133355555
Q ss_pred HHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 88 ARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 88 H~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
|+|+.. .++++.|++. +..+|.+|..|+||||+|+..|+
T Consensus 106 ~~A~~~~~~~~v~~Ll~~------g~~~~~~~~~g~t~L~~A~~~~~ 146 (261)
T 2xai_A 106 HEAARRGHVECVNSLIAY------GGNIDHKISHLGTPLYLACENQQ 146 (261)
T ss_dssp HHHHHTTCHHHHHHHHHT------TCCTTCCBTTTBCHHHHHHHTTC
T ss_pred HHHHHcCcHHHHHHHHHc------CCCCCcCCCCCCCHHHHHHHhCC
Confidence 555322 3334444431 23344444444444444444443
No 58
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.78 E-value=5.5e-19 Score=133.26 Aligned_cols=107 Identities=16% Similarity=0.034 Sum_probs=87.5
Q ss_pred hhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 15 FEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 15 ~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
..++.+.||||.|++. |+.++|+.||+ +.++ +..|. ||..|+.++|++|++.++++....+..|+||
T Consensus 40 ~~~~~g~t~L~~A~~~---g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~ 114 (244)
T 3ui2_A 40 DVVSEYETPWWTAARK---ADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTA 114 (244)
T ss_dssp HHHHHHHHHHHHHHTT---TCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCH
T ss_pred ccccCCCCHHHHHHHc---CCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCH
Confidence 3456788999999999 99999999998 4433 22222 9999999999999999888754333889999
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
||+|+.. .++++.|++ .++.+|.+|..|+||||+|+..++
T Consensus 115 L~~A~~~g~~~~v~~Ll~------~ga~~~~~d~~g~t~l~~A~~~~~ 156 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEALVE------LGADIEVEDERGLTALELAREILK 156 (244)
T ss_dssp HHHHHHTTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHHHT
T ss_pred HHHHHHcCCHHHHHHHHH------CCCCCCCCCCCCCcHHHHHHHHHh
Confidence 9999754 688899886 367899999999999999996544
No 59
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.78 E-value=1.9e-18 Score=132.65 Aligned_cols=119 Identities=9% Similarity=-0.000 Sum_probs=81.4
Q ss_pred CCCchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCC
Q 035924 11 DQSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHL 82 (138)
Q Consensus 11 ~~~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~ 82 (138)
.....++..++||||.||.. |+.++|+.|++.+.++. ..|. ||..|+.++|++|++.++++ +..|..
T Consensus 50 ~~~~~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~ 124 (285)
T 3d9h_A 50 NPLMGDAVSDWSPMHEAAIH---GHQLSLRNLISQGWAVN-IITADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTAD 124 (285)
T ss_dssp CTTCSSSCCSCCHHHHHHHT---TCHHHHHHHHHTTCCSC-EECTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTT
T ss_pred CcccCCCccCCCHHHHHHHc---CCHHHHHHHHHCCCCCC-CcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCC
Confidence 34556778888999999999 99999999998765442 2221 88888888888888877665 356888
Q ss_pred CchHHHHHHHH--HHHHHHHHHHhhhc--------------------------CcccccccccCCCCcHHHHHHhcCCcc
Q 035924 83 WLSPHARGFVG--GIAIDVLFGWLRLS--------------------------NKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 83 G~TpLH~A~~~--~~~v~~Ll~~~~~~--------------------------~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
|+||||+|+.. .++++.|++..... ..+..+|.+|..|+||||+|+..|+.+
T Consensus 125 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~ 204 (285)
T 3d9h_A 125 WHTPLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRA 204 (285)
T ss_dssp CCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHH
T ss_pred CCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHH
Confidence 88888888443 33334443321000 134567777778888888888777754
No 60
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.77 E-value=1.4e-18 Score=128.24 Aligned_cols=112 Identities=11% Similarity=-0.022 Sum_probs=56.6
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHh----cCCcccccccH--------HHHccCHHHHHHHhccCCccccccCC
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFV----EDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNH 81 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~----~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~ 81 (138)
+..|+.|+||||.|++. |+.++|+.|++ .+.. ++..|. |+..|+.+++++|++.++++ +..|.
T Consensus 3 ~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~~~~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~ 77 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQ---GNLPAVHRLVNLFQQGGRE-LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDR 77 (241)
T ss_dssp ----CTTCCHHHHHHHT---TCHHHHHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCT
T ss_pred cccCCCCCcHHHHHHHc---CCHHHHHHHHHHHHhcCCC-CCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCC
Confidence 44566667777777777 77777766665 2211 121111 66666666666666665554 23466
Q ss_pred CCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 82 LWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 82 ~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
.|+||||+|... .++++.|++.... ....++.+|..|+||||+|+..|+
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~~~--~~~~~~~~~~~g~t~L~~A~~~~~ 128 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSAAP--GTLDLEARNYDGLTALHVAVNTEC 128 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHSCT--TSCCTTCCCTTSCCHHHHHHHHTC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC--ccccccccCcCCCcHHHHHHHcCC
Confidence 666666666432 3445555543210 111344444445555555544444
No 61
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.77 E-value=2.5e-19 Score=134.46 Aligned_cols=115 Identities=10% Similarity=-0.047 Sum_probs=93.7
Q ss_pred ccCCCchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccC
Q 035924 9 RADQSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLN 80 (138)
Q Consensus 9 ~~~~~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d 80 (138)
.+......+..+.||||.|+.. |+.++|+.|++.++++. ..|. ||..|+.++|++|++.++++ +..|
T Consensus 10 ~~~~~~~~~~~~~t~L~~A~~~---g~~~~v~~Ll~~g~~~~-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d 84 (229)
T 2vge_A 10 SPRKARRARLNPLVLLLDAALT---GELEVVQQAVKEMNDPS-QPNEEGITALHNAICGANYSIVDFLITAGANV-NSPD 84 (229)
T ss_dssp CCCCCCCTTSCHHHHHHHHHHH---TCHHHHHHHHHHSSCTT-CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCC
T ss_pred CCccccccccchhHHHHHHHHc---CCHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCC
Confidence 3444555666778999999999 99999999999766542 2222 99999999999999998876 4679
Q ss_pred CCCchHHHHHHHH--HHHHHHHHHHhhhcCccccccccc-CCCCcHHHHH--HhcCCcc
Q 035924 81 HLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKD-DDGNTALHMR--ISRVHWK 134 (138)
Q Consensus 81 ~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D-~~G~TpLHlA--a~~g~~~ 134 (138)
..|+||||+|+.. .++++.|++ .++.++.+| .+|+||||+| +..|+.+
T Consensus 85 ~~g~tpLh~A~~~g~~~~v~~Ll~------~ga~~~~~~~~~g~tpL~~A~a~~~~~~~ 137 (229)
T 2vge_A 85 SHGWTPLHCAASCNDTVICMALVQ------HGAAIFATTLSDGATAFEKCDPYREGYAD 137 (229)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHT------TTCCTTCCCSSTTCCTGGGCCTTSTTHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHH------cCCCcccccCCCCCCHHHHHHHHhcChHH
Confidence 9999999999754 688898885 467889987 6999999999 8888765
No 62
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.77 E-value=2e-18 Score=127.47 Aligned_cols=108 Identities=13% Similarity=-0.033 Sum_probs=57.5
Q ss_pred hccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCchHHHHH
Q 035924 18 RHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARG 90 (138)
Q Consensus 18 ~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A 90 (138)
..+.||||.|+.. |+.++++.|++.+..+.... ..|+..|+.+++++|++.++...+..|..|+||||+|
T Consensus 42 ~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A 118 (237)
T 3b7b_A 42 EDQRTPLMEAAEN---NHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWA 118 (237)
T ss_dssp TTCCCHHHHHHHT---TCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHH
T ss_pred CCCCCHHHHHHHh---CCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHH
Confidence 3445555555555 55555555554433221100 0155555555555555554332334455556666655
Q ss_pred HHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 91 FVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 91 ~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
... .++++.|++ .+..++.+|..|+||||+|+..|+.+
T Consensus 119 ~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~ 158 (237)
T 3b7b_A 119 TEYKHVDLVKLLLS------KGSDINIRDNEENICLHWAAFSGCVD 158 (237)
T ss_dssp HHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHCCHH
T ss_pred HHcCCHHHHHHHHH------CCCCCCccCCCCCCHHHHHHHCCCHH
Confidence 432 455566554 24566777777777777777777654
No 63
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=1.1e-18 Score=139.91 Aligned_cols=111 Identities=13% Similarity=-0.008 Sum_probs=81.4
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccc--c-----cHHHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLER--M-----DGAAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~--~-----d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
...+..|.||||.||.. |++++|+.|++.+.++... . ..||..|+.++|++|++.++++ +..|..|+||
T Consensus 8 ~~~~~~g~t~L~~Aa~~---g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~ 83 (437)
T 1n11_A 8 GGGGESGLTPLHVASFM---GHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTP 83 (437)
T ss_dssp -------CCHHHHHHHH---TCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCH
T ss_pred cccCCCCCCHHHHHHHC---CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCH
Confidence 45677889999999999 9999999999876543211 1 1199999999999999888776 4568899999
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
||+|+.. .++++.|++. ++.+|.+|..|+||||+|+..|+.+
T Consensus 84 L~~A~~~g~~~~v~~Ll~~------ga~~~~~~~~g~t~L~~A~~~g~~~ 127 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLEN------NANPNLATTAGHTPLHIAAREGHVE 127 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHH------TCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred HHHHHHCCCHHHHHHHHhC------CCCCCCCCCCCCcHHHHHHHcCCHH
Confidence 9999665 6778888863 4567777788888888888777754
No 64
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.77 E-value=1.7e-18 Score=127.71 Aligned_cols=72 Identities=13% Similarity=0.031 Sum_probs=36.4
Q ss_pred HHHccCHHHHHHHhccCCccccccC-CCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLN-HLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d-~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
|+..|+.+++++|++.++++.. .+ ..|+||||+|+.. .++++.|++ .++.+|.+|..|+||||+|+..|+
T Consensus 123 A~~~~~~~~~~~Ll~~g~~~~~-~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~ 195 (241)
T 1k1a_A 123 AVNTECQETVQLLLERGADIDA-VDIKSGRSPLIHAVENNSLSMVQLLLQ------HGANVNAQMYSGSSALHSASGRGL 195 (241)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTC-CCTTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCBCTTSCBHHHHHHHHTC
T ss_pred HHHcCCHHHHHHHHHcCCCccc-ccccCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCC
Confidence 4444444444444444433321 22 3444444444322 345555554 245566667777777777776666
Q ss_pred cc
Q 035924 133 WK 134 (138)
Q Consensus 133 ~~ 134 (138)
.+
T Consensus 196 ~~ 197 (241)
T 1k1a_A 196 LP 197 (241)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 65
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.77 E-value=1.6e-18 Score=131.07 Aligned_cols=112 Identities=8% Similarity=-0.058 Sum_probs=86.7
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH------HHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG------AAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
.+..+..+.||||.|+.. |+.++++.|++.++++....+. |+..|+.++|++|++.++++ +..|..|+||
T Consensus 62 ~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 137 (261)
T 2xai_A 62 VNGVTADWHTPLFNACVS---GSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNI-DHKISHLGTP 137 (261)
T ss_dssp TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCBTTTBCH
T ss_pred CCCCCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CcCCCCCCCH
Confidence 344567788999999999 9999999999876654322221 88999999999999888776 4568899999
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
||+|+.. .++++.|++. ++.+|. |..|+||||+|+..|+.++
T Consensus 138 L~~A~~~~~~~~v~~Ll~~------g~~~~~-~~~g~t~Lh~A~~~~~~~~ 181 (261)
T 2xai_A 138 LYLACENQQRACVKKLLES------GADVNQ-GKGQDSPLHAVARTASEEL 181 (261)
T ss_dssp HHHHHHTTCHHHHHHHHHH------TCCTTC-CBTTBCHHHHHHHHTCHHH
T ss_pred HHHHHHhCCHHHHHHHHHc------CCCCCC-CCCCCChHHHHHHcCCHHH
Confidence 9999654 6778888864 556774 8889999999999888653
No 66
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.77 E-value=2.7e-19 Score=140.19 Aligned_cols=116 Identities=12% Similarity=-0.022 Sum_probs=89.2
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccC---HHHHHHHhccCCccccccCCCCc
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGN---NHFAMEMASLKPWLARKLNHLWL 84 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~---~~~v~~Ll~~~~~~~~~~d~~G~ 84 (138)
.+..|.||||.||.. |+.++|+.||+.+.++- ..|. |+..|+ .++++.|++......+..|..|+
T Consensus 127 ~d~~g~TpLh~Aa~~---g~~~~v~~Ll~~Gad~n-~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~ 202 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSI---ANLELVKHLVKHGSNRL-YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNR 202 (327)
T ss_dssp CSTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTT-BCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCC
T ss_pred cCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCC
Confidence 678899999999999 99999999999876652 2222 999998 67777777765333457799999
Q ss_pred hHHHHHHH------HHHHHHHHHHHhhhcC---------------------------------------cccccccccCC
Q 035924 85 SPHARGFV------GGIAIDVLFGWLRLSN---------------------------------------KEQILKWKDDD 119 (138)
Q Consensus 85 TpLH~A~~------~~~~v~~Ll~~~~~~~---------------------------------------~~~~vn~~D~~ 119 (138)
||||+|+. ..++++.|++...... .+..+|.+|..
T Consensus 203 tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~ 282 (327)
T 1sw6_A 203 TILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSN 282 (327)
T ss_dssp CHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTT
T ss_pred CHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCC
Confidence 99999975 2577787776532100 00048999999
Q ss_pred CCcHHHHHHhcCCccc
Q 035924 120 GNTALHMRISRVHWKY 135 (138)
Q Consensus 120 G~TpLHlAa~~g~~~~ 135 (138)
|+||||+|+.+|+.++
T Consensus 283 G~TpLh~A~~~g~~~~ 298 (327)
T 1sw6_A 283 GDTCLNIAARLGNISI 298 (327)
T ss_dssp SCCHHHHHHHHCCHHH
T ss_pred CCCHHHHHHHcCCHHH
Confidence 9999999999998753
No 67
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.77 E-value=5.4e-19 Score=132.62 Aligned_cols=112 Identities=13% Similarity=0.056 Sum_probs=86.6
Q ss_pred hhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcc----------ccccc--------HHHHccCHHHHHHHhccCCccccc
Q 035924 17 QRHIYNYIPTFSLIITMLRPEALYSMFVEDPHV----------LERMD--------GAAAAGNNHFAMEMASLKPWLARK 78 (138)
Q Consensus 17 ~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~----------l~~~d--------~Aa~~G~~~~v~~Ll~~~~~~~~~ 78 (138)
+..+.||||.|+..+..|+.++|+.|++.+... ....| .||..|+.++|++|++.++++. .
T Consensus 43 ~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~-~ 121 (260)
T 3jxi_A 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH-A 121 (260)
T ss_dssp TTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT-C
T ss_pred cCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC-c
Confidence 366999999999322339999999999854221 11111 1999999999999999988764 4
Q ss_pred cC--------------CCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 79 LN--------------HLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 79 ~d--------------~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
.| ..|+||||+|+.. .++++.|++.. ..++.+|.+|..|+||||+|+..|+
T Consensus 122 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~---~~ga~~~~~d~~g~TpLh~A~~~~~ 188 (260)
T 3jxi_A 122 QARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENG---HKQADLRRQDSRGNTVLHALVAIAD 188 (260)
T ss_dssp CCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred cccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcc---ccCCCCcccCCCCCcHHHHHHHhcc
Confidence 45 5899999999764 78889988611 0468899999999999999998776
No 68
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.77 E-value=1.1e-19 Score=136.38 Aligned_cols=118 Identities=8% Similarity=-0.056 Sum_probs=93.4
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
+..+..+.||||.|+.. |+.++++.||+.+.++- ..|. ||..|+.++|++|++.++++....|..|+|
T Consensus 48 ~~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~ga~~n-~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t 123 (229)
T 2vge_A 48 SQPNEEGITALHNAICG---ANYSIVDFLITAGANVN-SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGAT 123 (229)
T ss_dssp TCCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCC
T ss_pred CCCCCCCCCHHHHHHHc---CCHHHHHHHHHCCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCC
Confidence 44677899999999999 99999999999876542 2221 999999999999999988875444579999
Q ss_pred HHHHH--HHH--HHHHHHHHHHhhhc------------------------Ccccc--cccccCCCCcHHHHHHhcCCccc
Q 035924 86 PHARG--FVG--GIAIDVLFGWLRLS------------------------NKEQI--LKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 86 pLH~A--~~~--~~~v~~Ll~~~~~~------------------------~~~~~--vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|||+| ... .++++.|++..... ..++. ++.+|..|+||||+|+.+|+.++
T Consensus 124 pL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~ 203 (229)
T 2vge_A 124 AFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGY 203 (229)
T ss_dssp TGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSSTTBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEE
T ss_pred HHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccccccCccccccccccccCCCcccHHHHHHHcCCcce
Confidence 99998 322 68889998764321 11333 78899999999999999998764
No 69
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=2.9e-18 Score=128.45 Aligned_cols=108 Identities=8% Similarity=-0.109 Sum_probs=91.1
Q ss_pred hccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHHH
Q 035924 18 RHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHAR 89 (138)
Q Consensus 18 ~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~ 89 (138)
..+.||||.|++. |++++|+.|++.++++....+. |+..|+.++|++|++.++++ +..|..|+||||+
T Consensus 3 ~~g~~~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 78 (285)
T 1wdy_A 3 VEDNHLLIKAVQN---EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLL 78 (285)
T ss_dssp HHHHHHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred cccchHHHHHHHc---CCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHH
Confidence 3467999999999 9999999999987765333121 99999999999999988776 4578999999999
Q ss_pred HHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 90 GFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 90 A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|+.. .++++.|++ .+..++.+|..|+||||+|+..|+.++
T Consensus 79 A~~~~~~~~v~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~ 120 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLS------KGADVNECDFYGFTAFMEAAVYGKVKA 120 (285)
T ss_dssp HHHHTCHHHHHHHHH------TTCCTTCBCTTCCBHHHHHHHTTCHHH
T ss_pred HHHcCCHHHHHHHHH------cCCCCCccCcccCCHHHHHHHhCCHHH
Confidence 9765 788898886 367789999999999999999998653
No 70
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.76 E-value=1.5e-18 Score=133.72 Aligned_cols=111 Identities=13% Similarity=-0.036 Sum_probs=90.6
Q ss_pred hhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 15 FEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 15 ~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
..++.+.++||.||+. |+.+.|+.|+...+...+..|. ||..|+.++|++|++.++++ +..|..|+||
T Consensus 19 ~~~~~~~~~L~~A~~~---g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~ 94 (351)
T 3utm_A 19 LTGEYKKDELLEAARS---GNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGLVP 94 (351)
T ss_dssp HHHHHHHHHHHHHHHH---TCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCH
T ss_pred eeccccchhHHHHHHc---CCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCcH
Confidence 3456778999999999 9999999999864433333332 99999999999999988776 4578999999
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
||+|+.. .++++.|++ .++.++.+|..|+||||+|+..|+.++
T Consensus 95 L~~A~~~g~~~iv~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~~~ 139 (351)
T 3utm_A 95 LHNACSYGHYEVTELLLK------HGACVNAMDLWQFTPLHEAASKNRVEV 139 (351)
T ss_dssp HHHHHHTTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHCCCHHHHHHHHH------CCCCCCCCCCCCCCHHHHHHHcCCHHH
Confidence 9999654 788898886 367789999999999999999998753
No 71
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.76 E-value=2.7e-18 Score=133.57 Aligned_cols=112 Identities=13% Similarity=0.001 Sum_probs=84.3
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhc-CCcccccccH--------HHHc---cC-HHHHHHHhccCCccccccC
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVE-DPHVLERMDG--------AAAA---GN-NHFAMEMASLKPWLARKLN 80 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~-~~~~l~~~d~--------Aa~~---G~-~~~v~~Ll~~~~~~~~~~d 80 (138)
...+..|.||||.|++. |+.++|+.||++ +.++ +..|. ++.. ++ ..++++|++.++++ +.+|
T Consensus 162 ~~~~~~g~T~L~~A~~~---g~~~~v~~LL~~~gad~-n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~-n~~d 236 (337)
T 4g8k_A 162 ERLRKGGATALMDAAEK---GHVEVLKILLDEMGADV-NACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADV-NVRG 236 (337)
T ss_dssp --CTTCSCCHHHHHHHH---TCHHHHHHHHHHSCCCT-TCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCT-TCCC
T ss_pred ccccCCCCcHHHHHHHC---CCHHHHHHHHhccCCCc-CccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCC-CCcC
Confidence 34466789999999999 999999999964 3332 22221 3333 33 35788999888876 4679
Q ss_pred CCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 81 HLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 81 ~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
..|+||||+|+.. .++++.|+. ..+..+|.+|.+|+||||+|+.+|+.++
T Consensus 237 ~~g~t~L~~a~~~~~~~~v~~Ll~-----~~~~~vn~~d~~G~TpL~~A~~~g~~~i 288 (337)
T 4g8k_A 237 ERGKTPLILAVEKKHLGLVQRLLE-----QEHIEINDTDSDGKTALLLAVELKLKKI 288 (337)
T ss_dssp GGGCCHHHHHHHTTCHHHHHHHHT-----STTCCTTCBCTTSCBHHHHHHHTTCHHH
T ss_pred CCCCCHHHHHHHhhhhHHHHHHHH-----hcCCcccCcCCCCCCHHHHHHHcCCHHH
Confidence 9999999999654 567777774 2467899999999999999999998754
No 72
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.76 E-value=9.1e-19 Score=131.31 Aligned_cols=114 Identities=11% Similarity=-0.078 Sum_probs=89.7
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccc--c-------------cccH---HHHccCHHHHHHHhccCCcccc
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVL--E-------------RMDG---AAAAGNNHFAMEMASLKPWLAR 77 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l--~-------------~~d~---Aa~~G~~~~v~~Ll~~~~~~~~ 77 (138)
.+..+.||||.|+.....|+.++|+.||+.++... . .... |+..|+.++|++|++.++++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~- 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH- 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC-
Confidence 57889999999998766689999999998654321 1 0111 999999999999999988764
Q ss_pred ccCCC-------------CchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHh--cCCc
Q 035924 78 KLNHL-------------WLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRIS--RVHW 133 (138)
Q Consensus 78 ~~d~~-------------G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~--~g~~ 133 (138)
..|.. |+||||+|+.. .++++.|++.. ..++.+|.+|..|+||||+|+. .++.
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~---~~ga~~n~~d~~g~TpLh~A~~~~~~~~ 187 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP---HQPASLEATDSLGNTVLHALVMIADNSP 187 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCCSCH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc---ccCCCcCccCCCCCCHHHHHHHcccCCc
Confidence 44554 99999999764 78889988611 1478899999999999999999 5554
No 73
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.75 E-value=1.7e-18 Score=131.13 Aligned_cols=113 Identities=10% Similarity=-0.022 Sum_probs=88.4
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcc------ccc----cc--------HHHHccCHHHHHHHhccCCcccc
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHV------LER----MD--------GAAAAGNNHFAMEMASLKPWLAR 77 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~------l~~----~d--------~Aa~~G~~~~v~~Ll~~~~~~~~ 77 (138)
.+..+.||||.|+.....|+.++|+.||+.+... ++. .| .||..|+.++|++|++.++++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~- 128 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ- 128 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT-
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC-
Confidence 4678999999999633339999999999864321 111 11 1999999999999999988764
Q ss_pred ccCC--------------CCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 78 KLNH--------------LWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 78 ~~d~--------------~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
..+. .|+||||+|+.. .++++.|++.. ..++.+|.+|..|+||||+|+..|+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~---~~gad~~~~d~~g~tpLh~A~~~~~ 196 (273)
T 2pnn_A 129 AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS---WQPADISARDSVGNTVLHALVEVAD 196 (273)
T ss_dssp CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCS---SCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred ccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc---cCCCCceeeCCCCCcHHHHHHHccC
Confidence 4454 799999999764 68889988610 0367899999999999999999887
No 74
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.75 E-value=1.8e-18 Score=129.62 Aligned_cols=108 Identities=11% Similarity=-0.063 Sum_probs=65.0
Q ss_pred hccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc------cHHHHccCHHHHHHHhccCCccccccCCCCchHHHHHH
Q 035924 18 RHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGF 91 (138)
Q Consensus 18 ~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~ 91 (138)
..|.||||.|++. |+.+.++.||+.+.++-... ..||..|+.++|++|++.++++ +..|..|+||||+|+
T Consensus 3 ~~g~t~L~~a~~~---~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~ 78 (239)
T 1ycs_B 3 ITGQVSLPPGKRT---NLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNAV 78 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHHH
T ss_pred ccccccCchhhhh---hhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHH
Confidence 4588999999999 99999999999876542221 1199999999999999988865 567999999999997
Q ss_pred HH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 92 VG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 92 ~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
.. .++++.|++. ++.+|.+|..|+||||+|+..|+.++
T Consensus 79 ~~g~~~~v~~Ll~~------ga~~~~~d~~g~tpL~~A~~~~~~~~ 118 (239)
T 1ycs_B 79 CAGHTEIVKFLVQF------GVNVNAADSDGWTPLHCAASCNNVQV 118 (239)
T ss_dssp HHTCHHHHHHHHHH------TCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred HcCCHHHHHHHHHc------CCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 65 7888999874 67899999999999999999998754
No 75
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.75 E-value=4.6e-18 Score=130.49 Aligned_cols=71 Identities=10% Similarity=0.020 Sum_probs=45.0
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
|+..|+.+++++|++.++++ +..|..|+||||+|+.. .++++.|++. ++.+|. |..|+||||+|+..|+.
T Consensus 164 A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~------ga~~~~-~~~g~t~L~~A~~~~~~ 235 (285)
T 3d9h_A 164 AARRGHVECVNSLIAYGGNI-DHKISHLGTPLYLACENQQRACVKKLLES------GADVNQ-GKGQDSPLHAVVRTASE 235 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCBTTTBCHHHHHHHTTCHHHHHHHHHT------TCCTTC-CBTTBCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHC------CCCCCC-CCCCCCHHHHHHHcCCH
Confidence 66666666666666655544 23466666666666432 5666666652 455663 77888888888888776
Q ss_pred c
Q 035924 134 K 134 (138)
Q Consensus 134 ~ 134 (138)
+
T Consensus 236 ~ 236 (285)
T 3d9h_A 236 E 236 (285)
T ss_dssp H
T ss_pred H
Confidence 4
No 76
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.75 E-value=9.2e-18 Score=129.33 Aligned_cols=85 Identities=8% Similarity=0.008 Sum_probs=62.5
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCc
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWL 84 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~ 84 (138)
.+..+..+.||||.|+.. |+.++|+.|++.+.++. ..|. |+..|+.++|++|++.++++ +..|..|+
T Consensus 51 ~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~ 125 (351)
T 3utm_A 51 CHASDGRKSTPLHLAAGY---NRVRIVQLLLQHGADVH-AKDKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQF 125 (351)
T ss_dssp CCCSSTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCC
T ss_pred cccCCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCC
Confidence 345577788999999999 99999999998766542 2211 88999999999999887765 35688899
Q ss_pred hHHHHHHHH--HHHHHHHHH
Q 035924 85 SPHARGFVG--GIAIDVLFG 102 (138)
Q Consensus 85 TpLH~A~~~--~~~v~~Ll~ 102 (138)
||||+|... .++++.|++
T Consensus 126 t~L~~A~~~~~~~~v~~Ll~ 145 (351)
T 3utm_A 126 TPLHEAASKNRVEVCSLLLS 145 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHH
Confidence 999998433 344444443
No 77
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.75 E-value=3.3e-18 Score=137.10 Aligned_cols=71 Identities=14% Similarity=0.049 Sum_probs=30.3
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
|+..|+.+++++|++.+.++ +..|..|+||||+|+.. .++++.|++ .++.+|.+|..|+||||+|+.+|+.
T Consensus 285 A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~gad~n~~~~~g~t~L~~A~~~g~~ 357 (437)
T 1n11_A 285 VAQEGHVPVADVLIKHGVMV-DATTRMGYTPLHVASHYGNIKLVKFLLQ------HQADVNAKTKLGYSPLHQAAQQGHT 357 (437)
T ss_dssp HHHHTCHHHHHHHHHHTCCT-TCCCSSCCCHHHHHHHSSCSHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHhCCccC-CCCCCCCCCHHHHHHHcCcHHHHHHHHh------cCCCCCCCCCCCCCHHHHHHHCChH
Confidence 44444444444444433332 12344444444444321 233444443 2344455555555555555554443
No 78
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.74 E-value=5.6e-18 Score=134.66 Aligned_cols=112 Identities=12% Similarity=-0.071 Sum_probs=86.9
Q ss_pred hhhhccCcHHHHHHhcCCCC---CHHHHHHHHhcCCcccc-------cc--------cHHHHccCHHHHHHHhccCCccc
Q 035924 15 FEQRHIYNYIPTFSLIITML---RPEALYSMFVEDPHVLE-------RM--------DGAAAAGNNHFAMEMASLKPWLA 76 (138)
Q Consensus 15 ~~~~~~~t~Lh~Aa~~~~~G---~~~~v~~Ll~~~~~~l~-------~~--------d~Aa~~G~~~~v~~Ll~~~~~~~ 76 (138)
..+..+.||||.|+.. | +.++++.|++.+.++.. .. ..||..|+.++|++|++.++...
T Consensus 230 ~~d~~g~t~L~~A~~~---~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 306 (373)
T 2fo1_E 230 ELDRNGMTALMIVAHN---EGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK 306 (373)
T ss_dssp CCCTTSCCHHHHHHHS---CSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT
T ss_pred hcCCCCCCHHHHHHHh---CCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc
Confidence 3466778888888888 7 78888888887655421 01 11899999999999998764334
Q ss_pred cccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 77 RKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 77 ~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+..|..|+||||+|+.. .++++.|++ .++.+|.+|..|+||||+|+.+|+.++
T Consensus 307 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~------~gad~~~~d~~g~t~l~~A~~~g~~~i 361 (373)
T 2fo1_E 307 DKQDEDGKTPIMLAAQEGRIEVVMYLIQ------QGASVEAVDATDHTARQLAQANNHHNI 361 (373)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHH------TTCCSSCCCSSSCCHHHHHHHTTCHHH
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCccCCCCCCCCHHHHHHHcCCHHH
Confidence 56789999999999655 688888886 367899999999999999999998764
No 79
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.74 E-value=9.2e-18 Score=129.52 Aligned_cols=106 Identities=10% Similarity=0.026 Sum_probs=89.8
Q ss_pred cCcHHHHHHhcCCCCCHHHHHHHHhcCCccccc-----ccH--------HHHc---cCHHHHHHHhccCCccccccCCCC
Q 035924 20 IYNYIPTFSLIITMLRPEALYSMFVEDPHVLER-----MDG--------AAAA---GNNHFAMEMASLKPWLARKLNHLW 83 (138)
Q Consensus 20 ~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~-----~d~--------Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G 83 (138)
..++|+.|+.. |+++.++.++..++++... .+. ||.. |+.++|++|++.++++ +.+|..|
T Consensus 130 ~l~~l~~a~~~---~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g 205 (278)
T 1dcq_A 130 KLHSLCEAVKT---RDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKG 205 (278)
T ss_dssp HHHHHHHHHHT---TCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTC
T ss_pred hhhhhhhHhhh---cccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCC
Confidence 34789999999 9999999999988765322 121 8888 9999999999998886 4679999
Q ss_pred chHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 84 LSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 84 ~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+||||+|+.. .+++++|++ .++++|.+|.+|+||||+|+..|+.++
T Consensus 206 ~TpLh~A~~~g~~~~v~~Ll~------~gad~~~~d~~g~tpL~~A~~~~~~~~ 253 (278)
T 1dcq_A 206 STALHYCCLTDNAECLKLLLR------GKASIEIANESGETPLDIAKRLKHEHC 253 (278)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHH------cCCCCCCccCCCCCHHHHHHHcCCHHH
Confidence 9999999764 788899986 478899999999999999999998753
No 80
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.74 E-value=1.3e-17 Score=122.21 Aligned_cols=108 Identities=13% Similarity=0.004 Sum_probs=74.1
Q ss_pred hhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 15 FEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 15 ~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
..+..+.||||.|+.. |+.++++.|++.++.+....+. |+..|+.+++++|++.+++. +..|..|+||
T Consensus 37 ~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 112 (240)
T 3eu9_A 37 QPDKENVTLLHWAAIN---NRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSC 112 (240)
T ss_dssp CCCTTSCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CCCCCCCCHHHHHHHh---CCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCH
Confidence 3455677777777777 7777777777766554322211 77777788777777766654 3457777788
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
||+|... .++++.|++ .+..++.+|..|+||||+|+.+++
T Consensus 113 l~~A~~~~~~~~~~~Ll~------~~~~~~~~~~~g~t~l~~a~~~~~ 154 (240)
T 3eu9_A 113 IHLAAQFGHTSIVAYLIA------KGQDVDMMDQNGMTPLMWAAYRTH 154 (240)
T ss_dssp HHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHCC
T ss_pred HHHHHHcCHHHHHHHHHh------cCCCccccCCCCCcHHHHHHHhCC
Confidence 8877543 566677765 255677888888888888886665
No 81
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.73 E-value=1.1e-17 Score=108.15 Aligned_cols=80 Identities=13% Similarity=0.042 Sum_probs=61.2
Q ss_pred cCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccHHHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHH
Q 035924 20 IYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDGAAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAI 97 (138)
Q Consensus 20 ~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v 97 (138)
|.||||.|+.. |+.++++.|++.+.+ + +.+|..|+||||+|+.. .+++
T Consensus 2 g~t~L~~A~~~---~~~~~v~~Ll~~g~~--------------------------~-n~~d~~g~t~L~~A~~~~~~~~v 51 (93)
T 1n0q_A 2 GRTPLHLAARN---GHLEVVKLLLEAGAD--------------------------V-NAKDKNGRTPLHLAARNGHLEVV 51 (93)
T ss_dssp -CCHHHHHHHH---TCHHHHHHHHHTTCC--------------------------T-TCCCTTSCCHHHHHHHTTCHHHH
T ss_pred CCcHHHHHHHc---CCHHHHHHHHHcCCC--------------------------C-cccCCCCCCHHHHHHHcCCHHHH
Confidence 67899999998 888888877765432 2 34578899999998654 6777
Q ss_pred HHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 98 DVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 98 ~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+.|++ .++.+|.+|.+|+||||+|+..|+.++
T Consensus 52 ~~Ll~------~ga~~~~~d~~g~t~l~~A~~~~~~~~ 83 (93)
T 1n0q_A 52 KLLLE------AGADVNAKDKNGRTPLHLAARNGHLEV 83 (93)
T ss_dssp HHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHHH------cCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 88876 367788889999999999998888653
No 82
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.73 E-value=2e-17 Score=123.80 Aligned_cols=112 Identities=14% Similarity=0.067 Sum_probs=89.9
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc----c---HHHHccCHHHHHHHhccCCccccccCCCCchH
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM----D---GAAAAGNNHFAMEMASLKPWLARKLNHLWLSP 86 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~----d---~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~Tp 86 (138)
...+..+.||||.|+.. |+.++++.|++.+.++.... . .|+..|+.+++++|++.++++ +..|..|+||
T Consensus 33 ~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 108 (285)
T 1wdy_A 33 FQEEEGGWTPLHNAVQM---SREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTA 108 (285)
T ss_dssp CCCTTTCCCHHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBH
T ss_pred cccCCCCCcHHHHHHHc---CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCH
Confidence 33467789999999999 99999999999866542211 1 199999999999999988876 4579999999
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCcccccccc----------cCCCCcHHHHHHhcCCccc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKWK----------DDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~----------D~~G~TpLHlAa~~g~~~~ 135 (138)
||+|... .++++.|++. +..++.+ |..|.||||+|+..|+.++
T Consensus 109 L~~A~~~~~~~~~~~Ll~~------g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~ 163 (285)
T 1wdy_A 109 FMEAAVYGKVKALKFLYKR------GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEV 163 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHT------TCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHH
T ss_pred HHHHHHhCCHHHHHHHHHh------CCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHH
Confidence 9999654 6788888874 3445555 8899999999999998653
No 83
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.73 E-value=3.8e-18 Score=129.94 Aligned_cols=107 Identities=7% Similarity=-0.048 Sum_probs=89.5
Q ss_pred hhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHH
Q 035924 17 QRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHA 88 (138)
Q Consensus 17 ~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH 88 (138)
+..+.||||.||.. |++++|+.||+.++++- ..|. ||..|+.++|++|++.++++ +..|..|+||||
T Consensus 37 ~~~~~t~l~~A~~~---g~~~~v~~Ll~~g~~~~-~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL~ 111 (299)
T 1s70_B 37 KFDDGAVFLAACSS---GDTEEVLRLLERGADIN-YANVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPLH 111 (299)
T ss_dssp EECHHHHHHHHHHH---TCHHHHHHHHHHCCCTT-CBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred ccCCccHHHHHHHc---CCHHHHHHHHHcCCCCc-ccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHHH
Confidence 44567999999999 99999999999876542 2221 99999999999999988876 457999999999
Q ss_pred HHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 89 RGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 89 ~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
+|+.. .++++.|++ .++.++.+|..|+||||+|+..|+.+
T Consensus 112 ~A~~~g~~~~v~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~~ 153 (299)
T 1s70_B 112 AAASCGYLDIAEYLIS------QGAHVGAVNSEGDTPLDIAEEEAMEE 153 (299)
T ss_dssp HHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHCCSHHHHH
T ss_pred HHHHcCCHHHHHHHHh------CCCCCCCcCCCCCCHHHHHHhcchHH
Confidence 99765 788899886 36779999999999999999877654
No 84
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.73 E-value=8.1e-18 Score=132.14 Aligned_cols=29 Identities=3% Similarity=-0.177 Sum_probs=15.9
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCC
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDP 47 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~ 47 (138)
.+..+.||||.|+.. |+.++|+.|++.+.
T Consensus 49 ~d~~g~t~L~~A~~~---g~~~~v~~Ll~~g~ 77 (364)
T 3ljn_A 49 QNRFGCTALHLACKF---GCVDTAKYLASVGE 77 (364)
T ss_dssp CCTTCCCHHHHHHHH---CCHHHHHHHHHHCC
T ss_pred cCCCCCcHHHHHHHc---CCHHHHHHHHHCCC
Confidence 344455555555555 55555555555443
No 85
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.73 E-value=2.7e-17 Score=120.50 Aligned_cols=109 Identities=12% Similarity=-0.074 Sum_probs=61.5
Q ss_pred hhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccCCccccccCCCCchHHHH
Q 035924 17 QRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLKPWLARKLNHLWLSPHAR 89 (138)
Q Consensus 17 ~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~ 89 (138)
|..+.|||+.|++. |++++++.|++.+.++.... ..|+..|+.++|++|++.++......+..|+||||+
T Consensus 6 d~~~~~~l~~A~~~---g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~ 82 (240)
T 3eu9_A 6 DDYSTWDIVKATQY---GIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHW 82 (240)
T ss_dssp SCGGGCCHHHHHHT---TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHH
T ss_pred ccccchHHHHHHHc---CChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHH
Confidence 34455666666666 66666666666544331110 016666666666666666555544444556666666
Q ss_pred HHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 90 GFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 90 A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
|... .++++.|++. +..++.+|..|.||||+|+..|+.+
T Consensus 83 A~~~~~~~~v~~Ll~~------g~~~~~~~~~g~t~l~~A~~~~~~~ 123 (240)
T 3eu9_A 83 ATRQGHLSMVVQLMKY------GADPSLIDGEGCSCIHLAAQFGHTS 123 (240)
T ss_dssp HHHHTCHHHHHHHHHT------TCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHcCCHHHHHHHHHc------CCCCcccCCCCCCHHHHHHHcCHHH
Confidence 6443 4555655542 4455666666666666666666543
No 86
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.73 E-value=6.8e-18 Score=129.73 Aligned_cols=109 Identities=6% Similarity=-0.111 Sum_probs=70.5
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccc--cccc---H---HHHccCHHHHHHHhccCCccccccCCCCchHH
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVL--ERMD---G---AAAAGNNHFAMEMASLKPWLARKLNHLWLSPH 87 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l--~~~d---~---Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpL 87 (138)
.+..+.||||.|+.. |+.++++.|++.++++. +... . |+..|+.+++++|++.+++... ...|+|||
T Consensus 91 ~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--~~~g~t~L 165 (285)
T 3kea_A 91 FDDKGNTALYYAVDS---GNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--LAILLSCI 165 (285)
T ss_dssp CCTTSCCHHHHHHHT---TCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--CSTHHHHH
T ss_pred cCCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--ccCCccHH
Confidence 445566666666666 66666666666544332 1111 1 6666777777777666654321 12667777
Q ss_pred HHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcH-HHHHHhcCCccc
Q 035924 88 ARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTA-LHMRISRVHWKY 135 (138)
Q Consensus 88 H~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~Tp-LHlAa~~g~~~~ 135 (138)
|+|+.. .++++.|++. ++.+|.+|..|+|| ||+|+..|+.++
T Consensus 166 ~~A~~~g~~~~v~~Ll~~------gad~n~~~~~g~t~~L~~A~~~~~~~~ 210 (285)
T 3kea_A 166 HITIKNGHVDMMILLLDY------MTSTNTNNSLLFIPDIKLAIDNKDIEM 210 (285)
T ss_dssp HHHHHTTCHHHHHHHHHH------HHHTCTTCCCBCCTTHHHHHHHTCHHH
T ss_pred HHHHHcChHHHHHHHHHc------CCCCCcccCCCCChHHHHHHHcCCHHH
Confidence 777543 6777887764 56689999999998 999999988653
No 87
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.72 E-value=1e-17 Score=130.30 Aligned_cols=114 Identities=9% Similarity=-0.048 Sum_probs=80.3
Q ss_pred hccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccccc-----H---HHHccCHHHHHHHhccCCccc-------------
Q 035924 18 RHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMD-----G---AAAAGNNHFAMEMASLKPWLA------------- 76 (138)
Q Consensus 18 ~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d-----~---Aa~~G~~~~v~~Ll~~~~~~~------------- 76 (138)
..+.|+||.|++. |++++|+.||+.++++-...+ . ||..|+.++|++|++.++++.
T Consensus 23 ~~~~t~L~~Av~~---g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 23 VEDNHLLIKAVQN---EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHHT---TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCChHHHHHHHc---CCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence 3467999999999 999999999998766532211 1 999999999999998765431
Q ss_pred -------------------cccCCCCchHHHHHHHH--HHHHHHHHHHhhhc----CcccccccccCCCCcHHHHHHhcC
Q 035924 77 -------------------RKLNHLWLSPHARGFVG--GIAIDVLFGWLRLS----NKEQILKWKDDDGNTALHMRISRV 131 (138)
Q Consensus 77 -------------------~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~----~~~~~vn~~D~~G~TpLHlAa~~g 131 (138)
+..|..|+||||+|+.. .++++.|++..... ......+..+..|.||||+|+.+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence 34567888888888543 56777777643211 112234456778999999999998
Q ss_pred Ccc
Q 035924 132 HWK 134 (138)
Q Consensus 132 ~~~ 134 (138)
+.+
T Consensus 180 ~~~ 182 (337)
T 4g8k_A 180 HVE 182 (337)
T ss_dssp CHH
T ss_pred CHH
Confidence 865
No 88
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.72 E-value=2.8e-17 Score=128.22 Aligned_cols=104 Identities=10% Similarity=-0.026 Sum_probs=87.4
Q ss_pred cHHHHHHhcCCCCCHHHHHHHHhcCCccccc-----ccH--------HHHc---cCHHHHHHHhccCCccccccCCCCch
Q 035924 22 NYIPTFSLIITMLRPEALYSMFVEDPHVLER-----MDG--------AAAA---GNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 22 t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~-----~d~--------Aa~~---G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
++|+.|+.. |+++.|+.|++.++++... .+. |+.. |+.++|++|+..++++ +..|..|+|
T Consensus 153 ~~L~~A~~~---g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~T 228 (301)
T 2b0o_E 153 QRLWTAICN---RDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNT 228 (301)
T ss_dssp HHHHHHHHT---TCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCCC
T ss_pred HHHhhhhhc---cCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCCC
Confidence 679999999 9999999999887765321 121 8876 8999999999998876 467999999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|||+|+.. .+++++|++ .+++++.+|.+|+||||+|+..|+.++
T Consensus 229 pLh~A~~~g~~~~v~~Ll~------~gad~~~~d~~G~TpL~~A~~~~~~~i 274 (301)
T 2b0o_E 229 ALHYAALYNQPDCLKLLLK------GRALVGTVNEAGETALDIARKKHHKEC 274 (301)
T ss_dssp HHHHHHHTTCHHHHHHHHH------TTCCCSCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 99999765 688899986 367899999999999999999998754
No 89
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.71 E-value=5.5e-18 Score=123.89 Aligned_cols=104 Identities=9% Similarity=-0.014 Sum_probs=85.1
Q ss_pred cCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH------HHHccCH----HHHHHHhccCCccccccCCCCchHHHH
Q 035924 20 IYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG------AAAAGNN----HFAMEMASLKPWLARKLNHLWLSPHAR 89 (138)
Q Consensus 20 ~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~------Aa~~G~~----~~v~~Ll~~~~~~~~~~d~~G~TpLH~ 89 (138)
.+++||.||+. |+++.++.++..++...+.... |+..|+. ++|++|++.++++ +.+|..|+||||+
T Consensus 6 ~~~~l~~Aa~~---g~~~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpLh~ 81 (186)
T 3t8k_A 6 EYRTVSAAAML---GTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLFFP 81 (186)
T ss_dssp HCSSHHHHHHH---SCHHHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTHHH
T ss_pred cccHHHHHHHc---CCHHHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHHHH
Confidence 57899999999 9999999999987654331111 8898875 5999999998887 4679999999999
Q ss_pred HHHH--------HHHHHHHHHHhhhcCcccccccccCCCC-cHHHHHHhcCCc
Q 035924 90 GFVG--------GIAIDVLFGWLRLSNKEQILKWKDDDGN-TALHMRISRVHW 133 (138)
Q Consensus 90 A~~~--------~~~v~~Ll~~~~~~~~~~~vn~~D~~G~-TpLHlAa~~g~~ 133 (138)
|... .+++++|++ .++++|.+|..|+ ||||+|+..|..
T Consensus 82 a~~~~~~~~~~~~~iv~~Ll~------~Gadin~~d~~g~ttpLh~A~~~~~~ 128 (186)
T 3t8k_A 82 LFQGGGNDITGTTELCKIFLE------KGADITALYKPYKIVVFKNIFNYFVD 128 (186)
T ss_dssp HHHHCTTCHHHHHHHHHHHHH------TTCCSSSCBGGGTBCTTGGGGGCCSC
T ss_pred HHHcCCcchhhHHHHHHHHHH------CCCCCCccCCCcCchHHHHHHHcCCC
Confidence 9543 467888886 4789999999999 999999996653
No 90
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.71 E-value=2.5e-18 Score=134.67 Aligned_cols=109 Identities=6% Similarity=-0.145 Sum_probs=81.3
Q ss_pred chhhhccCcHHHHHHhcCCCCC---HHHHHHHHhcCCcccccccH--------HHH----ccCHHHHHHHhccCCc----
Q 035924 14 SFEQRHIYNYIPTFSLIITMLR---PEALYSMFVEDPHVLERMDG--------AAA----AGNNHFAMEMASLKPW---- 74 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~---~~~v~~Ll~~~~~~l~~~d~--------Aa~----~G~~~~v~~Ll~~~~~---- 74 (138)
+..+..|.||||.|+.. |+ .+.++.|++.....++..|. |+. .|+.++|++|++....
T Consensus 158 n~~d~~g~TpLh~A~~~---g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~ 234 (327)
T 1sw6_A 158 LYGDNMGESCLVKAVKS---VNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVK 234 (327)
T ss_dssp TBCCTTCCCHHHHHHHS---SHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHH
T ss_pred CCcCCCCCCHHHHHHHh---cccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhc
Confidence 35677899999999999 88 56666666543221222222 777 8999999999865210
Q ss_pred ----------------------------------------cccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccc
Q 035924 75 ----------------------------------------LARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQI 112 (138)
Q Consensus 75 ----------------------------------------~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~ 112 (138)
-.+.+|..|+||||+|+.. .+++++|++ .+++
T Consensus 235 ~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~------~Gad 308 (327)
T 1sw6_A 235 KQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD------YGAD 308 (327)
T ss_dssp GGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHH------TTCC
T ss_pred ccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCC
Confidence 1346789999999999765 788999986 3788
Q ss_pred cccccCCCCcHHHHHHhcC
Q 035924 113 LKWKDDDGNTALHMRISRV 131 (138)
Q Consensus 113 vn~~D~~G~TpLHlAa~~g 131 (138)
+|.+|.+|+||||+|+.+|
T Consensus 309 ~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 309 PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TTCCCTTSCCGGGGTCC--
T ss_pred CcccCCCCCCHHHHHHhcC
Confidence 9999999999999999876
No 91
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.70 E-value=3.3e-17 Score=135.23 Aligned_cols=104 Identities=10% Similarity=-0.027 Sum_probs=87.7
Q ss_pred cHHHHHHhcCCCCCHHHHHHHHhcCCccccc-----ccH--------HHH---ccCHHHHHHHhccCCccccccCCCCch
Q 035924 22 NYIPTFSLIITMLRPEALYSMFVEDPHVLER-----MDG--------AAA---AGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 22 t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~-----~d~--------Aa~---~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
+.||.|+.. |+++.|+.||+.++++... .+. |+. .|+.++|++|++.++++ +..|..|+|
T Consensus 134 ~~L~~A~~~---g~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~T 209 (497)
T 3lvq_E 134 QRLWTAICN---RDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNT 209 (497)
T ss_dssp HHHHHHHHH---TCHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCC
T ss_pred HHHHHHHhc---cCHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCc
Confidence 569999999 9999999999987765322 011 755 89999999999998886 467999999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|||+|+.. .+++++|++ .++++|.+|.+|+||||+|+..|+.++
T Consensus 210 pLh~A~~~g~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~ 255 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLK------GRALVGTVNEAGETALDIARKKHHKEC 255 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHH------TCCCCSCCCTTCCCHHHHHHHTTCHHH
T ss_pred HHHHHHHcCCHHHHHHHHH------cCCCCCCcCCCCCCHHHHHHHcCCHHH
Confidence 99999654 688899986 478899999999999999999998764
No 92
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.70 E-value=4e-17 Score=129.69 Aligned_cols=119 Identities=11% Similarity=-0.076 Sum_probs=89.2
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-------cHHHHccCHHHHHHHhccC---CccccccCCC
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-------DGAAAAGNNHFAMEMASLK---PWLARKLNHL 82 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-------d~Aa~~G~~~~v~~Ll~~~---~~~~~~~d~~ 82 (138)
.+..+..+.||||.|+.. |+.++|+.|++.+.++.... ..|+..|+.++|++|++.+ .++ +..|..
T Consensus 159 vn~~d~~g~TpL~~A~~~---g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~ 234 (373)
T 2fo1_E 159 VNAMDCDENTPLMLAVLA---RRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRN 234 (373)
T ss_dssp TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTT
T ss_pred CcCCCCCCCCHHHHHHHc---ChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCC
Confidence 345577899999999999 99999999999766542211 1199999999999999875 333 467999
Q ss_pred CchHHHHHHH-----HHHHHHHHHHHhhhcC--cccccccccCCCCcHHHHHHhcCCccc
Q 035924 83 WLSPHARGFV-----GGIAIDVLFGWLRLSN--KEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 83 G~TpLH~A~~-----~~~~v~~Ll~~~~~~~--~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|+||||+|+. ..++++.|++...... .....+.+|..|+||||+|+..|+.++
T Consensus 235 g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~ 294 (373)
T 2fo1_E 235 GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPI 294 (373)
T ss_dssp SCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHH
T ss_pred CCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHH
Confidence 9999999964 4678898887532210 011133478899999999999988653
No 93
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.69 E-value=1e-16 Score=128.93 Aligned_cols=108 Identities=10% Similarity=-0.041 Sum_probs=89.4
Q ss_pred ccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc--cH-------HHHccCHHHHHHHhccCCccccccCCCCchHHHH
Q 035924 19 HIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM--DG-------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHAR 89 (138)
Q Consensus 19 ~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~--d~-------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~ 89 (138)
...|+||.|+.. .|++++|+.||+.+.++.... .. ||..|+.++|++|+..++++ +..|..|+||||+
T Consensus 198 ~~~t~L~~Aa~~--~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~TpLh~ 274 (368)
T 3jue_A 198 HPGALLFRASGH--PPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGPLHH 274 (368)
T ss_dssp CHHHHHHHHTSS--SCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHc--cCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCHHHH
Confidence 455899999863 389999999999876653221 11 99999999999999998876 4679999999999
Q ss_pred HHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 90 GFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 90 A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|+.. .+++++|++ .++.+|.+|.+|+||||+|+..|+.++
T Consensus 275 A~~~g~~~~v~~LL~------~Gad~~~~d~~G~TpL~~A~~~g~~~i 316 (368)
T 3jue_A 275 ATILGHTGLACLFLK------RGADLGARDSEGRDPLTIAMETANADI 316 (368)
T ss_dssp HHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred HHHcCcHHHHHHHHH------CcCCCCCcCCCCCCHHHHHHHCCCHHH
Confidence 9765 788899886 368899999999999999999998754
No 94
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.65 E-value=1.3e-16 Score=106.38 Aligned_cols=99 Identities=8% Similarity=-0.039 Sum_probs=80.8
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
..+|+.+.||||.|+.. |+.++++.|++.++++. ..|. |+..|+.+++++|++.++++ +..|..|+|
T Consensus 3 ~~~d~~g~t~L~~A~~~---~~~~~~~~Ll~~g~~~~-~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t 77 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKN---GHAEEVKKLLSKGADVN-ARSKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNT 77 (115)
T ss_dssp -CCSCSSCCHHHHHHHH---TCHHHHHHHTTTTCCSS-CCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCC
T ss_pred cccCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCC-CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCC
Confidence 35678899999999999 99999999999876542 2221 99999999999999988876 467999999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcH
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTA 123 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~Tp 123 (138)
|||+|... .++++.|++ .++.+|.+|..|.||
T Consensus 78 pl~~A~~~~~~~~~~~Ll~------~ga~~n~~~~~~~~~ 111 (115)
T 2l6b_A 78 PEHLAKKNGHHEIVKLLDA------KGADVNARSWGSSHH 111 (115)
T ss_dssp TTHHHHTTTCHHHHHHHHT------TSSSHHHHSCCCC--
T ss_pred HHHHHHHCCCHHHHHHHHH------cCCCCCcCCcccccc
Confidence 99999654 678888885 478899999999998
No 95
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.65 E-value=3.8e-17 Score=131.70 Aligned_cols=107 Identities=12% Similarity=-0.020 Sum_probs=81.6
Q ss_pred ccCcHHHHHHhcCCCCCHHHHHHHHhcCCc-----ccccccH-----HHHccCHHHHHHHhccCCccc--cccCCCCchH
Q 035924 19 HIYNYIPTFSLIITMLRPEALYSMFVEDPH-----VLERMDG-----AAAAGNNHFAMEMASLKPWLA--RKLNHLWLSP 86 (138)
Q Consensus 19 ~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~-----~l~~~d~-----Aa~~G~~~~v~~Ll~~~~~~~--~~~d~~G~Tp 86 (138)
.+.||||.||+. |+.++|+.|++.+.. ..+..+. ||..||.++|++|++.+++.. +..+.+ +||
T Consensus 91 ~~~T~Lh~Aa~~---G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~Tp 166 (376)
T 2aja_A 91 KSEVICFVAAIT---GCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHA 166 (376)
T ss_dssp CHHHHHHHHHHH---CCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHH
T ss_pred CcCCHHHHHHHc---CCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCH
Confidence 345999999999 999999999987641 1111111 999999999999999987421 122223 999
Q ss_pred HHHHHHH--HHHHHHHHHHhhhcCccccccc--ccCCCCcHHHHHH-hcCCccc
Q 035924 87 HARGFVG--GIAIDVLFGWLRLSNKEQILKW--KDDDGNTALHMRI-SRVHWKY 135 (138)
Q Consensus 87 LH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~--~D~~G~TpLHlAa-~~g~~~~ 135 (138)
||+|+.. .++++.|++. ++.++. +|.+|+||||+|| .+||.++
T Consensus 167 Lh~Aa~~G~~eiv~~Ll~~------ga~~~~~~~d~~g~TpL~~Aa~~~G~~ei 214 (376)
T 2aja_A 167 FRLAAENGHLHVLNRLCEL------APTEATAMIQAENYYAFRWAAVGRGHHNV 214 (376)
T ss_dssp HHHHHHTTCHHHHHHHHHS------CGGGHHHHHHHHHHHHHHHHHSTTCCHHH
T ss_pred HHHHHHCCCHHHHHHHHHc------CCccchhccCCCCCCHHHHHHHHCCCHHH
Confidence 9999765 7889999873 566776 8999999999999 9998754
No 96
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.65 E-value=3.2e-16 Score=104.54 Aligned_cols=92 Identities=9% Similarity=0.001 Sum_probs=66.3
Q ss_pred cccCCCchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccHHHHccCHHHHHHHhccCCccccccCCCCchHH
Q 035924 8 VRADQSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDGAAAAGNNHFAMEMASLKPWLARKLNHLWLSPH 87 (138)
Q Consensus 8 ~~~~~~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpL 87 (138)
+.+......+..+.||||.|+.. |+.++++.|++.+.+ + +..|..|+|||
T Consensus 12 ~~~~~~~~~~~~g~t~L~~A~~~---g~~~~v~~Ll~~g~~--------------------------i-~~~d~~g~tpL 61 (110)
T 2zgd_A 12 GLVPRGSHMGSDLGKKLLEAARA---GQDDEVRILMANGAD--------------------------V-AAKDKNGSTPL 61 (110)
T ss_dssp C---------CCHHHHHHHHHHH---TCHHHHHHHHHTTCC--------------------------T-TCCCTTCCCHH
T ss_pred CCCCcccccCCccchHHHHHHHc---CCHHHHHHHHHcCCC--------------------------C-CccCCCCCCHH
Confidence 44555556677788888888888 888888877765432 2 34588999999
Q ss_pred HHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 88 ARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 88 H~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
|+|+.. .++++.|++ .++.+|.+|..|+||||+|+..|+.++
T Consensus 62 h~A~~~~~~~~v~~Ll~------~ga~~~~~d~~g~tpl~~A~~~~~~~~ 105 (110)
T 2zgd_A 62 HLAARNGHLEVVKLLLE------AGADVXAQDKFGKTAFDISIDNGNEDL 105 (110)
T ss_dssp HHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred HHHHHcCCHHHHHHHHH------cCCCccccccCCCcHHHHHHHcCCHHH
Confidence 999654 678888886 367799999999999999999998754
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.64 E-value=2.6e-16 Score=122.73 Aligned_cols=105 Identities=10% Similarity=-0.117 Sum_probs=77.1
Q ss_pred hhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHH
Q 035924 16 EQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPH 87 (138)
Q Consensus 16 ~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpL 87 (138)
.+..+.||||.|+.....|++++++.||+.+.++- ..|. |+..|+.++|++|++.++++ +.+|.+|+|||
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn-~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~G~TpL 263 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-AKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETAL 263 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCC-SCCCTTSCCHH
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCC-CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHH
Confidence 46778999999998533378999999999876542 2222 99999999999999998886 46799999999
Q ss_pred HHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 88 ARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 88 H~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
|+|... .+++++|++... +.|+||||+|+..|+.+
T Consensus 264 ~~A~~~~~~~iv~~Ll~~ga------------~~g~tpLh~A~~~g~~~ 300 (301)
T 2b0o_E 264 DIARKKHHKECEELLEQAQA------------GTFAFPLHVDYSWVIST 300 (301)
T ss_dssp HHHHHHTCHHHHHHHHHHHH------------HTTSSCCC---------
T ss_pred HHHHHcCCHHHHHHHHHhcC------------CCCCChhHHHHhcCCcC
Confidence 999654 678888886431 26999999999999853
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.59 E-value=2.3e-15 Score=101.50 Aligned_cols=73 Identities=12% Similarity=-0.062 Sum_probs=63.7
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
|+..|+.+++++|++.++++ +..|..|+||||+|+.. .++++.|++ .++.+|.+|..|+||||+|+..|+.
T Consensus 14 A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~d~~g~tpL~~A~~~~~~ 86 (123)
T 3aaa_C 14 ALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLL------KGADINAPDKHHITPLLSAVYEGHV 86 (123)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHT------TTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHH------cCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 99999999999999988876 46799999999999754 678888885 4678999999999999999999986
Q ss_pred cc
Q 035924 134 KY 135 (138)
Q Consensus 134 ~~ 135 (138)
++
T Consensus 87 ~~ 88 (123)
T 3aaa_C 87 SC 88 (123)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.59 E-value=2.4e-15 Score=113.23 Aligned_cols=97 Identities=7% Similarity=-0.122 Sum_probs=79.0
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc-----cH---HHHccCHHHHHHHhccCCccccccCCCCc
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM-----DG---AAAAGNNHFAMEMASLKPWLARKLNHLWL 84 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~-----d~---Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~ 84 (138)
.+..+..|.||||.|+.. |+.++|+.||+.++++.... .. ||..|+.++|++|++.++++ +..|..|+
T Consensus 70 ~~~~d~~g~t~L~~A~~~---g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~ 145 (244)
T 3ui2_A 70 VDAVDENGRTALLFVAGL---GSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGL 145 (244)
T ss_dssp TTCBCTTSCBHHHHHHHH---TCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCC
T ss_pred CCCcCCCCCCHHHHHHHC---CCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCC
Confidence 455677899999999999 99999999999877653222 11 99999999999999998876 46799999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCcc
Q 035924 85 SPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWK 134 (138)
Q Consensus 85 TpLH~A~~~~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~ 134 (138)
||||+|... ..+..|.||||+|+..|+.+
T Consensus 146 t~l~~A~~~---------------------~~~~~~~~~l~~a~~~g~~~ 174 (244)
T 3ui2_A 146 TALELAREI---------------------LKTTPKGNPMQFGRRIGLEK 174 (244)
T ss_dssp CHHHHHHHH---------------------HTTCCCSSHHHHHHHHHHHH
T ss_pred cHHHHHHHH---------------------HhccCCCCHHHHHHHcChHH
Confidence 999999642 11367899999999988764
No 100
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.57 E-value=6.7e-16 Score=118.20 Aligned_cols=108 Identities=16% Similarity=0.022 Sum_probs=77.8
Q ss_pred ccCcHHHHHHhcCCCCCHHHHHHHHhcCCcc-cccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHHH
Q 035924 19 HIYNYIPTFSLIITMLRPEALYSMFVEDPHV-LERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHAR 89 (138)
Q Consensus 19 ~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~-l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~ 89 (138)
...+++|.|+.. |+++.++.+++..... ++..|. ||..|+.++|++|++.++...+..|..|+||||+
T Consensus 75 ~~~~~l~~a~~~---~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~ 151 (276)
T 4hbd_A 75 ACRSDAHPELVR---RHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIML 151 (276)
T ss_dssp HHSTTCCHHHHH---HHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH
T ss_pred HhccCCCHHHHH---HHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHH
Confidence 345788999999 9999999998653321 222222 9999999999999998873334556666666666
Q ss_pred HH--------------------------------------HH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHh
Q 035924 90 GF--------------------------------------VG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRIS 129 (138)
Q Consensus 90 A~--------------------------------------~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~ 129 (138)
|+ .. .++++.|++ .++++|.+|.+|+||||+|+.
T Consensus 152 a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~------~gad~n~~d~~G~TpLh~A~~ 225 (276)
T 4hbd_A 152 TALATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLA------CEADVNVQDDDGSTALMCACE 225 (276)
T ss_dssp GGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh------CCCCCCCCCCCCCCHHHHHHH
Confidence 63 11 455666664 367788889999999999998
Q ss_pred cCCccc
Q 035924 130 RVHWKY 135 (138)
Q Consensus 130 ~g~~~~ 135 (138)
.|+.++
T Consensus 226 ~g~~~i 231 (276)
T 4hbd_A 226 HGHKEI 231 (276)
T ss_dssp HTCHHH
T ss_pred CCCHHH
Confidence 887653
No 101
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.56 E-value=8.1e-15 Score=100.53 Aligned_cols=73 Identities=19% Similarity=0.092 Sum_probs=64.2
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
||..|+.++|++|++.++++ +..|..|+||||+|+.. .++++.|++ .++.+|.+|..|+||||+|+..|+.
T Consensus 21 A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~~~~d~~g~t~L~~A~~~~~~ 93 (136)
T 2jab_A 21 AARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLK------NGADVNAVDAIGFTPLHLAAFIGHL 93 (136)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred HHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHH------cCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 99999999999999988876 46799999999999765 688888886 3678999999999999999999986
Q ss_pred cc
Q 035924 134 KY 135 (138)
Q Consensus 134 ~~ 135 (138)
++
T Consensus 94 ~~ 95 (136)
T 2jab_A 94 EI 95 (136)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 102
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.56 E-value=2e-15 Score=105.83 Aligned_cols=104 Identities=8% Similarity=-0.151 Sum_probs=68.8
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCccccc----cc-H---HHHccCHHHHHHHhccCCccccccCCCCc
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLER----MD-G---AAAAGNNHFAMEMASLKPWLARKLNHLWL 84 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~----~d-~---Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~ 84 (138)
.+..+..+.||||.|+ . |+.++++.|++.+.++-.. .. . |+..|+.++|++|++.++++ +.+|..|+
T Consensus 38 ~~~~~~~g~t~L~~A~-~---~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~ 112 (156)
T 1bi7_B 38 PNAPNSYGRRPIQVMM-M---GSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL-DVRDAWGR 112 (156)
T ss_dssp TTCCCSSSCCTTTSSC-T---TCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTCC
T ss_pred CCCCCCCCCCHHHHHH-c---CCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC-cccCCCCC
Confidence 3445678999999985 7 9999999999976544211 11 3 99999999999999998876 46799999
Q ss_pred hHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHH
Q 035924 85 SPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMR 127 (138)
Q Consensus 85 TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlA 127 (138)
||||+|... .++++.|++ .++.++.+|..|.||.+-+
T Consensus 113 tpl~~A~~~~~~~~v~~Ll~------~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 113 LPVDLAEELGHRDVARYLRA------AAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHSS------CC-----------------
T ss_pred CHHHHHHHhCHHHHHHHHHH------cCCCCCccCcCcCcccccC
Confidence 999999654 677888774 5788999999999998844
No 103
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.54 E-value=4.6e-16 Score=125.37 Aligned_cols=103 Identities=14% Similarity=-0.043 Sum_probs=81.9
Q ss_pred hhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcc----cccccH-----HHHccCHHHHHHHhccCCcccc-ccCCCCchH
Q 035924 17 QRHIYNYIPTFSLIITMLRPEALYSMFVEDPHV----LERMDG-----AAAAGNNHFAMEMASLKPWLAR-KLNHLWLSP 86 (138)
Q Consensus 17 ~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~----l~~~d~-----Aa~~G~~~~v~~Ll~~~~~~~~-~~d~~G~Tp 86 (138)
+..+.||||.||+. |+.++|+.|++.+++. .+..+. ||..||.++|++|++.++++.. ..|..|+||
T Consensus 125 ~~~~~tpL~~Aa~~---G~~eiv~~Ll~~gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~Tp 201 (376)
T 2aja_A 125 QAENYQAFRLAAEN---GHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYA 201 (376)
T ss_dssp CHHHHHHHHHHHHT---TCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHc---CCHHHHHHHHhCCCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCH
Confidence 34567899999999 9999999999988642 111112 9999999999999999887642 268889999
Q ss_pred HHHHH-HH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 87 HARGF-VG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 87 LH~A~-~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
||+|+ .. .++++.|++. + ..|+||||+|+.+|+.++
T Consensus 202 L~~Aa~~~G~~eiv~~Ll~~------g-------a~~~taL~~Aa~~g~~ev 240 (376)
T 2aja_A 202 FRWAAVGRGHHNVINFLLDC------P-------VMLAYAEIHEFEYGEKYV 240 (376)
T ss_dssp HHHHHSTTCCHHHHHHHTTS------H-------HHHHHHHHCTTTTTTTTH
T ss_pred HHHHHHHCCCHHHHHHHHhC------C-------CccchHHHHHHHCCCHHH
Confidence 99999 65 7889988852 1 138999999999999764
No 104
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.53 E-value=1.4e-14 Score=99.15 Aligned_cols=73 Identities=11% Similarity=0.050 Sum_probs=63.8
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
||..|+.+++++|++.++++ +..|..|+||||+|+.. .++++.|++ .+..++.+|..|+||||+|+..|+.
T Consensus 17 A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~L~~A~~~~~~ 89 (137)
T 3c5r_A 17 ASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQ------HKALVNTTGYQNDSPLHDAAKNGHV 89 (137)
T ss_dssp HHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHH------TTCCTTCCCGGGCCHHHHHHHTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHH------cCCcccCcCCCCCCHHHHHHHcCCH
Confidence 99999999999999988776 46799999999999754 678888886 3678999999999999999999987
Q ss_pred cc
Q 035924 134 KY 135 (138)
Q Consensus 134 ~~ 135 (138)
++
T Consensus 90 ~~ 91 (137)
T 3c5r_A 90 DI 91 (137)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 105
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.52 E-value=1.8e-14 Score=103.55 Aligned_cols=98 Identities=8% Similarity=-0.094 Sum_probs=78.6
Q ss_pred CchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccc--cH------HHHccCHHHHHHHhccCCccccccCCCCc
Q 035924 13 SSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERM--DG------AAAAGNNHFAMEMASLKPWLARKLNHLWL 84 (138)
Q Consensus 13 ~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~--d~------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~ 84 (138)
.+..+..|.||||.|+.. |+.++++.|++.++++.... +. |+..|+.++|++|++.++++ +.+|..|+
T Consensus 69 ~~~~d~~g~t~L~~A~~~---~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~ 144 (183)
T 3deo_A 69 VDAVDENGRTALLFVAGL---GSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADI-EVEDERGL 144 (183)
T ss_dssp TTCCCTTSCCHHHHHHHH---TCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSC
T ss_pred CCCcCCCCCCHHHHHHHc---CCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCC-cCCCCCCC
Confidence 445677899999999999 99999999999876652221 11 99999999999999998876 46799999
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 85 SPHARGFVGGIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 85 TpLH~A~~~~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
||||+|... . ....+.|||++|+..|+.++
T Consensus 145 tpl~~A~~~-------~--------------~~~~~~~~l~~a~~~~~~~i 174 (183)
T 3deo_A 145 TALELAREI-------L--------------KTTPKGNPMQFGRRIGLEKV 174 (183)
T ss_dssp CHHHHHHHH-------H--------------HTCCCCSHHHHHHHHHHHHH
T ss_pred CHHHHHHHh-------c--------------cCcccccHHHHHHHcCHHHH
Confidence 999999642 0 12567899999999887653
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.49 E-value=1.7e-14 Score=95.88 Aligned_cols=73 Identities=18% Similarity=0.134 Sum_probs=63.3
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
|+..|+.+++++|++.++++ +..|..|+||||+|+.. .++++.|++ .++.++.+|..|+||||+|+..|+.
T Consensus 16 A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~d~~g~tpl~~A~~~~~~ 88 (115)
T 2l6b_A 16 AAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLA------KGADVNARSKDGNTPEHLAKKNGHH 88 (115)
T ss_dssp HHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTT------TTCCTTCCCTTCCCTTHHHHTTTCH
T ss_pred HHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHH------cCCCCcccCCCCCCHHHHHHHCCCH
Confidence 99999999999999988876 45799999999999654 677888875 4678999999999999999999987
Q ss_pred cc
Q 035924 134 KY 135 (138)
Q Consensus 134 ~~ 135 (138)
++
T Consensus 89 ~~ 90 (115)
T 2l6b_A 89 EI 90 (115)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 107
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.47 E-value=5.1e-14 Score=103.54 Aligned_cols=74 Identities=20% Similarity=0.124 Sum_probs=64.0
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
||..|+.++|++|++.++++ +..|..|+||||+|+.. .++++.|++. .++.+|.+|..|+||||+|+..|+.
T Consensus 80 A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----~g~~~~~~d~~g~tpL~~A~~~~~~ 153 (222)
T 3ehr_A 80 AAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFTQ-----PNIELNQQNKLGDTALHAAAWKGYA 153 (222)
T ss_dssp HHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTTS-----TTCCCCCCCTTSCCHHHHHHHHTCH
T ss_pred ccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHcC-----CCCCccccCCCCCCHHHHHHHcCCH
Confidence 99999999999999988776 46799999999999765 6788888752 2678999999999999999999987
Q ss_pred cc
Q 035924 134 KY 135 (138)
Q Consensus 134 ~~ 135 (138)
++
T Consensus 154 ~~ 155 (222)
T 3ehr_A 154 DI 155 (222)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 108
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.46 E-value=2e-13 Score=90.84 Aligned_cols=73 Identities=16% Similarity=0.116 Sum_probs=63.1
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~ 133 (138)
|+..|+.+++++|++.++++ +..|..|+||||+|... .++++.|++ .+..++.+|..|+||||+|+..|+.
T Consensus 9 A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~------~g~~~~~~~~~g~t~l~~A~~~~~~ 81 (126)
T 1n0r_A 9 AARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLE------AGADVNAKDKNGRTPLHLAARNGHL 81 (126)
T ss_dssp HHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred HHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHH------cCCCCcccCCCCCcHHHHHHHcChH
Confidence 89999999999999988776 45689999999999665 678888886 3677899999999999999999987
Q ss_pred cc
Q 035924 134 KY 135 (138)
Q Consensus 134 ~~ 135 (138)
++
T Consensus 82 ~~ 83 (126)
T 1n0r_A 82 EV 83 (126)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 109
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.45 E-value=3.7e-14 Score=97.18 Aligned_cols=73 Identities=15% Similarity=0.049 Sum_probs=62.8
Q ss_pred HHHccCHHHHHHHhccCCccccccCCCCchHHHHHHHH-HHHHHHHHHHhhhcCcccccccccCC-CCcHHHHHHhcCCc
Q 035924 56 AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHARGFVG-GIAIDVLFGWLRLSNKEQILKWKDDD-GNTALHMRISRVHW 133 (138)
Q Consensus 56 Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~A~~~-~~~v~~Ll~~~~~~~~~~~vn~~D~~-G~TpLHlAa~~g~~ 133 (138)
|+..|+.++|++|++.++++ +..|..|+||||+|+.. .++++.|++. ++.+|.+|.. |+||||+|+..|+.
T Consensus 19 A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~v~~Ll~~------g~~~~~~~~~~g~t~L~~A~~~~~~ 91 (136)
T 1d9s_A 19 AAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMMGSAQVAELLLLH------GAEPNCADPATLTRPVHDAAREGFL 91 (136)
T ss_dssp HHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTTSCHHHHHHHHHH------TCCSSCCBTTTTBCHHHHHHHHTCH
T ss_pred HHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHcCCHHHHHHHHHC------CCCCCCcCCCCCCCHHHHHHHcCCH
Confidence 99999999999999988776 46799999999999643 5678888863 6779999999 99999999999987
Q ss_pred cc
Q 035924 134 KY 135 (138)
Q Consensus 134 ~~ 135 (138)
++
T Consensus 92 ~~ 93 (136)
T 1d9s_A 92 DT 93 (136)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.43 E-value=1.4e-13 Score=105.94 Aligned_cols=101 Identities=9% Similarity=-0.052 Sum_probs=78.2
Q ss_pred chhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCch
Q 035924 14 SFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLS 85 (138)
Q Consensus 14 s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~T 85 (138)
+..+..|.||||.|+.....|+.++++.||+.+.++- ..|. ||..|+.++|++|++.++++ +.+|.+|+|
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in-~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~-~~~d~~g~t 240 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLD-KQTGKGSTALHYCCLTDNAECLKLLLRGKASI-EIANESGET 240 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTT-CCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCC
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCcc-ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCccCCCCC
Confidence 3346779999999999843468999999999876652 2222 99999999999999988876 467999999
Q ss_pred HHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhc
Q 035924 86 PHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISR 130 (138)
Q Consensus 86 pLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~ 130 (138)
|||+|... .+++++|++.. .+.|++|.++.+
T Consensus 241 pL~~A~~~~~~~~v~~Ll~~g--------------a~~~~~~~~v~~ 273 (278)
T 1dcq_A 241 PLDIAKRLKHEHCEELLTQAL--------------SGRFNSHVHVEY 273 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH--------------TTCCCSSCCCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcC--------------CCCCCcceeeec
Confidence 99999654 68889888753 255677766544
No 111
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.41 E-value=3e-13 Score=111.53 Aligned_cols=99 Identities=9% Similarity=-0.124 Sum_probs=69.5
Q ss_pred hhccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHH
Q 035924 17 QRHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHA 88 (138)
Q Consensus 17 ~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH 88 (138)
+..+.||||.|++....|+.++|+.||+.+.++- ..|. ||..|+.++|++|++.++++ +.+|.+|+||||
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn-~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpl~ 245 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLD-AKAADGNTALHYAALYNQPDCLKLLLKGRALV-GTVNEAGETALD 245 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTT-CCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCC-SCCCTTCCCHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCC-ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHH
Confidence 6788999999965222299999999999876552 2222 99999999999999998886 467999999999
Q ss_pred HHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHh
Q 035924 89 RGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRIS 129 (138)
Q Consensus 89 ~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~ 129 (138)
+|... .+++++|++. ++.++. ||||++..
T Consensus 246 ~A~~~~~~~~~~~Ll~~------ga~~~~------~~~h~~~~ 276 (497)
T 3lvq_E 246 IARKKHHKECEELLEQA------QAGTFA------FPLHVDYS 276 (497)
T ss_dssp HHHHTTCHHHHHHHHHT------CC------------------
T ss_pred HHHHcCCHHHHHHHHHh------CCCCCC------Ccceeecc
Confidence 99654 6888888863 444544 68887654
No 112
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.37 E-value=1.5e-12 Score=104.64 Aligned_cols=107 Identities=11% Similarity=-0.078 Sum_probs=68.7
Q ss_pred hccCcHHHHHHhcCCCCCHHHHHHHHhcCCcccccccH--------HHHccCHHHHHHHhccCCccccccCCCCchHHHH
Q 035924 18 RHIYNYIPTFSLIITMLRPEALYSMFVEDPHVLERMDG--------AAAAGNNHFAMEMASLKPWLARKLNHLWLSPHAR 89 (138)
Q Consensus 18 ~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~~~l~~~d~--------Aa~~G~~~~v~~Ll~~~~~~~~~~d~~G~TpLH~ 89 (138)
..+.||||.|+.. |++++|+.||+.+.++- ..|. |+..|+.++|++|++.++++ +..|.+|+||||+
T Consensus 233 ~~g~TpLh~Aa~~---g~~~iv~~LL~~Gadvn-~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~-~~~d~~G~TpL~~ 307 (368)
T 3jue_A 233 QDNATPLIQATAA---NSLLACEFLLQNGANVN-QADSAGRGPLHHATILGHTGLACLFLKRGADL-GARDSEGRDPLTI 307 (368)
T ss_dssp TTCCCHHHHHHHT---TCHHHHHHHHHTTCCTT-CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHH
T ss_pred cCCCCHHHHHHHC---CCHHHHHHHHHcCCCCC-CCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCC-CCcCCCCCCHHHH
Confidence 6788999999999 99999999999876542 2222 99999999999999998876 4679999999999
Q ss_pred HHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCC
Q 035924 90 GFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVH 132 (138)
Q Consensus 90 A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~ 132 (138)
|... .+++++|+.... ........+..|.|+|+++.....
T Consensus 308 A~~~g~~~iv~lLl~~~~---~~~~~~~~~~~~~t~l~i~~~~~~ 349 (368)
T 3jue_A 308 AMETANADIVTLLRLAKM---REAEAAQGQAGDETYLDIFRDFSL 349 (368)
T ss_dssp HHHTTCHHHHHHHHHHHC---------------------------
T ss_pred HHHCCCHHHHHHHHHcCC---CcccccccCCCCCCHHHHHHHHHh
Confidence 9654 678888876532 233345567889999998876543
No 113
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.17 E-value=3e-11 Score=77.46 Aligned_cols=48 Identities=19% Similarity=0.161 Sum_probs=39.9
Q ss_pred CCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 82 LWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 82 ~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
+|+||||+|+.. .++++.|++ .+..+|.+|..|+||||+|+..|+.++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~------~g~~~n~~d~~g~t~L~~A~~~~~~~~ 50 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLE------AGADVNAKDKNGRTPLHLAARNGHLEV 50 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHH------cCCCCcccCCCCCCHHHHHHHcCCHHH
Confidence 589999999765 678888886 367899999999999999999998753
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.00 E-value=3.4e-10 Score=74.92 Aligned_cols=56 Identities=14% Similarity=0.108 Sum_probs=42.5
Q ss_pred ccccccCCCCchHHHHHHHH--HHHHHHHHHHhhhcCcccccccccCCCCcHHHHHHhcCCccc
Q 035924 74 WLARKLNHLWLSPHARGFVG--GIAIDVLFGWLRLSNKEQILKWKDDDGNTALHMRISRVHWKY 135 (138)
Q Consensus 74 ~~~~~~d~~G~TpLH~A~~~--~~~v~~Ll~~~~~~~~~~~vn~~D~~G~TpLHlAa~~g~~~~ 135 (138)
......|.+|+||||+|+.. .++++.|++ .+..+|.+|..|+||||+|+..|+.++
T Consensus 15 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~------~g~~i~~~d~~g~tpLh~A~~~~~~~~ 72 (110)
T 2zgd_A 15 PRGSHMGSDLGKKLLEAARAGQDDEVRILMA------NGADVAAKDKNGSTPLHLAARNGHLEV 72 (110)
T ss_dssp -------CCHHHHHHHHHHHTCHHHHHHHHH------TTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred CcccccCCccchHHHHHHHcCCHHHHHHHHH------cCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence 33445789999999999765 678888886 367899999999999999999998653
No 115
>3fh1_A Uncharacterized NTF2-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=47.79 E-value=3.5 Score=26.68 Aligned_cols=41 Identities=22% Similarity=0.252 Sum_probs=33.6
Q ss_pred cccccccCCCchhhhccCcHHHHHHhcCCCCCHHHHHHHHhcCC
Q 035924 4 SSVTVRADQSSFEQRHIYNYIPTFSLIITMLRPEALYSMFVEDP 47 (138)
Q Consensus 4 ~~~~~~~~~~s~~~~~~~t~Lh~Aa~~~~~G~~~~v~~Ll~~~~ 47 (138)
|+++.++.|...+.+..-..++.|... ||++.+..|+..+.
T Consensus 6 ~~~~~~~~m~~~~~~~~v~~~~~a~~~---~D~~~l~~l~a~D~ 46 (129)
T 3fh1_A 6 SIITLHPDDRSEQTAEIMRRFNDVFQL---HDPAALPELIAEEC 46 (129)
T ss_dssp --CEEECCTTHHHHHHHHHHHHHHHHT---TCGGGHHHHEEEEE
T ss_pred ceEEecCCCCchhHHHHHHHHHHHHHc---cCHHHHHHhcCCCE
Confidence 678888999988888887888899999 99999999997654
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=40.30 E-value=23 Score=18.96 Aligned_cols=18 Identities=6% Similarity=-0.092 Sum_probs=12.9
Q ss_pred cHHHHHHhcCCCCCHHHHHHH
Q 035924 22 NYIPTFSLIITMLRPEALYSM 42 (138)
Q Consensus 22 t~Lh~Aa~~~~~G~~~~v~~L 42 (138)
--++.||.. ||++.++.|
T Consensus 15 QqiyvA~se---Gd~etv~~L 32 (40)
T 1gp8_A 15 KQMDAAASK---GDVETYRKL 32 (40)
T ss_dssp HHHHHHHTT---SCHHHHHHH
T ss_pred HHHHHHHhc---CCHHHHHHH
Confidence 346778888 888877765
Done!