BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035928
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P33079|A10A5_SOYBN Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1
Length = 93
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 17 HIHFHHHGKKDEMRNIPKGCLAILVGQEGEEQQKFVIPVIYINHPLFMQLLKEAEEEYGF 76
F+ + ++PKG A+ VG ++ ++F IPV Y+N P F +LL +AEEE+G+
Sbjct: 11 RTSFYTTQAASKRVDVPKGYAAVYVG---DKMRRFTIPVSYLNEPSFQELLSQAEEEFGY 67
Query: 77 D-QKGPITLPCHVEEFRTVQG 96
D G +T+PC EEF V
Sbjct: 68 DHPMGGLTIPCKEEEFLNVTA 88
>sp|P33081|AX15A_SOYBN Auxin-induced protein 15A OS=Glycine max PE=2 SV=1
Length = 82
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 9/88 (10%)
Query: 13 LHLPHIHFHHHGKKDEMRNIPKGCLAILVGQEGEEQQKFVIPVIYINHPLFMQLLKEAEE 72
LP I K + + PKG LA+ VG E+ ++FVIPV Y+N P F LL +AEE
Sbjct: 3 FRLPGIR-----KASKAADAPKGYLAVYVG---EKLKRFVIPVSYLNQPSFQDLLSQAEE 54
Query: 73 EYGFD-QKGPITLPCHVEEFRTVQGMID 99
E+G+D G +T+PC + F+ + ++
Sbjct: 55 EFGYDHPMGGLTIPCSEDVFQCITSCLN 82
>sp|P33080|AX10A_SOYBN Auxin-induced protein X10A OS=Glycine max PE=2 SV=1
Length = 92
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 44/64 (68%), Gaps = 4/64 (6%)
Query: 32 IPKGCLAILVGQEGEEQQKFVIPVIYINHPLFMQLLKEAEEEYGFD-QKGPITLPCHVEE 90
+PKG L + VG ++ ++F+IPV Y+N P F LL +AEEE+G+D G +T+PC +E
Sbjct: 25 VPKGYLVVYVG---DKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDE 81
Query: 91 FRTV 94
F TV
Sbjct: 82 FLTV 85
>sp|P33082|AXX15_SOYBN Auxin-induced protein X15 OS=Glycine max PE=2 SV=1
Length = 82
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 13 LHLPHIHFHHHGKKDEMRNIPKGCLAILVGQEGEEQQKFVIPVIYINHPLFMQLLKEAEE 72
LP I K + PKG LA+ VG E+ ++FVIPV Y+N P F LL +AEE
Sbjct: 3 FRLPGIR-----KASNAVDAPKGYLAVYVG---EKMKRFVIPVSYMNQPSFQDLLTQAEE 54
Query: 73 EYGFD-QKGPITLPCHVEEFRTV 94
E+G+D G +T+PC E F+ +
Sbjct: 55 EFGYDHPMGGLTIPCSEEVFQRI 77
>sp|P32295|ARG7_VIGRR Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var.
radiata GN=ARG7 PE=2 SV=1
Length = 92
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 4/68 (5%)
Query: 26 KDEMRNIPKGCLAILVGQEGEEQQKFVIPVIYINHPLFMQLLKEAEEEYGFD-QKGPITL 84
++ + PKG LA+ VG E ++FVIPV ++N PLF LL +AEEE+G+D G +T+
Sbjct: 19 SSKVLDAPKGYLAVYVG---ENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTI 75
Query: 85 PCHVEEFR 92
PC + F+
Sbjct: 76 PCSEDLFQ 83
>sp|P33083|AX6B_SOYBN Auxin-induced protein 6B OS=Glycine max PE=2 SV=1
Length = 90
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 7/91 (7%)
Query: 13 LHLPHIH---FHHHGKKDEMRNIPKGCLAILVGQEGEEQQKFVIPVIYINHPLFMQLLKE 69
LP I F + + ++ KG LA+ VG E+ ++FVIPV Y+N P F LL +
Sbjct: 3 FRLPGIRKASFSANQASSKAVDVEKGYLAVYVG---EKMRRFVIPVSYLNKPSFQDLLSQ 59
Query: 70 AEEEYGF-DQKGPITLPCHVEEFRTVQGMID 99
AEEE+G+ G +T+PC + F+ + ++
Sbjct: 60 AEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90
>sp|Q9QZK9|DNS2B_RAT Deoxyribonuclease-2-beta OS=Rattus norvegicus GN=Dnase2b PE=1 SV=1
Length = 356
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 18 IHFHHHGKKDEMRNIPKGCLAILVGQEGEEQQKFVIPVIY--------INHPLFMQLLKE 69
IH K IP L +L +G F Y I L + LL E
Sbjct: 202 IHMPQMCAKSSASKIPSRRLTVLQSAQGLNFLHFAKSTFYTDDIFAAWIAQKLKVHLLVE 261
Query: 70 AEEEYGFDQKGPITLPCHVEEFRTVQGMIDKDRSLLHHHHHHHVWC 115
+ + + +LP HV + ++G + D HH H WC
Sbjct: 262 SWQRKNHELPSNCSLPYHVYNIKAIRGPLQSD---FPSHHDHSKWC 304
>sp|Q9H7U1|CCSE2_HUMAN Serine-rich coiled-coil domain-containing protein 2 OS=Homo sapiens
GN=CCSER2 PE=2 SV=2
Length = 834
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 12 HLHLPHI-HFHHHGKKDEMRNIP 33
H HL H H+HHHGK D R P
Sbjct: 604 HYHLSHPDHYHHHGKSDLSRGSP 626
>sp|Q9T0P4|GLTB2_ARATH Ferredoxin-dependent glutamate synthase 2, chloroplastic
OS=Arabidopsis thaliana GN=GLU2 PE=1 SV=2
Length = 1629
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 16/95 (16%)
Query: 23 HGKKDEMRNI--PKGC----------LAILVGQEGEEQQKFVIPVIYINHPLFMQLLKEA 70
HG+++++R I PK L I G+ EE ++P Y NHP M EA
Sbjct: 365 HGRENDIRPISNPKASDSANLDSAAELLIRSGRTPEESLMILVPEAYKNHPTLMIKYPEA 424
Query: 71 EEEYGF--DQKGPITLPCHV--EEFRTVQGMIDKD 101
+ Y + Q P P V + +TV +D++
Sbjct: 425 VDFYDYYKGQMEPWDGPALVLFSDGKTVGACLDRN 459
>sp|P50734|MECA2_BACSU Adapter protein MecA 2 OS=Bacillus subtilis (strain 168) GN=mecB
PE=1 SV=1
Length = 194
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 60 HPLFMQLLKEAEEEYGFDQKGPITLPCHVEEFRTVQGMI 98
H LF ++ EA E GF+ GPI + + + QGM+
Sbjct: 38 HQLFKDMMNEANTELGFEANGPIAVEVYSLQ---AQGMV 73
>sp|Q3UHI0|CCSE2_MOUSE Serine-rich coiled-coil domain-containing protein 2 OS=Mus musculus
GN=Ccser2 PE=1 SV=1
Length = 833
Score = 30.0 bits (66), Expect = 4.8, Method: Composition-based stats.
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 12 HLHLPHI-HFHHHGKKDEMRNIP 33
H HL H H+HHHG+ D R P
Sbjct: 603 HYHLSHPGHYHHHGQSDLSRGSP 625
>sp|Q9KCF1|MECA1_BACHD Adapter protein MecA 1 OS=Bacillus halodurans (strain ATCC
BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=mecA1 PE=3 SV=1
Length = 201
Score = 29.3 bits (64), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 5/40 (12%)
Query: 60 HPLFMQLLKEAEEEYGFDQKGPITLPCHVEEFRT-VQGMI 98
H LF ++ EA++E GF GPI VE F QGM+
Sbjct: 38 HDLFRDMMLEADDELGFKADGPIA----VEVFALPAQGMV 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.144 0.487
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,127,134
Number of Sequences: 539616
Number of extensions: 2046328
Number of successful extensions: 14723
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 13043
Number of HSP's gapped (non-prelim): 1521
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)