BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035930
(857 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 151/356 (42%), Gaps = 83/356 (23%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 152
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNPMXXXXXXXXXXXXXXXXXXXXXXXX 651
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFG---------------------------------- 178
Query: 652 XIEPFCLHPSWQVSCFTPRLLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTH 711
T ++LS +K + S + P+L+ E + +S+
Sbjct: 179 ----------------TAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS------ 216
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFPG--Y 769
D W G +++L+ G PF+ ++ FP +
Sbjct: 217 -----------------DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 259
Query: 770 PVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWALIRCAVPPEL 823
P ARDL+ LLV + RLG ++G +K HPFFE + W + PP+L
Sbjct: 260 P----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 311
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 143 bits (360), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 151/356 (42%), Gaps = 83/356 (23%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 148
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNPMXXXXXXXXXXXXXXXXXXXXXXXX 651
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFG---------------------------------- 174
Query: 652 XIEPFCLHPSWQVSCFTPRLLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTH 711
T ++LS +K + S + P+L+ E + +S+
Sbjct: 175 ----------------TAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSS------ 212
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP--GY 769
D W G +++L+ G PF+ ++ FP +
Sbjct: 213 -----------------DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 255
Query: 770 PVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWALIRCAVPPEL 823
P ARDL+ LLV + RLG ++G +K HPFFE + W + PP+L
Sbjct: 256 P----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 307
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 151/356 (42%), Gaps = 83/356 (23%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G L +K S F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 151
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNPMXXXXXXXXXXXXXXXXXXXXXXXX 651
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFG---------------------------------- 177
Query: 652 XIEPFCLHPSWQVSCFTPRLLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTH 711
T ++LS +K + S + P+L+ E + ++S+
Sbjct: 178 ----------------TAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSS------ 215
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFPG--Y 769
D W G +++L+ G PF+ ++ FP +
Sbjct: 216 -----------------DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 258
Query: 770 PVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWALIRCAVPPEL 823
P ARDL+ LLV + RLG ++G +K HPFFE + W + PP+L
Sbjct: 259 P----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 150/356 (42%), Gaps = 83/356 (23%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 149
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNPMXXXXXXXXXXXXXXXXXXXXXXXX 651
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFG---------------------------------- 175
Query: 652 XIEPFCLHPSWQVSCFTPRLLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTH 711
T ++LS +K + + + P+L+ E + +S+
Sbjct: 176 ----------------TAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDL---- 215
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFPG--Y 769
W G +++L+ G PF+ ++ FP +
Sbjct: 216 ------------------W-ALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFF 256
Query: 770 PVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWALIRCAVPPEL 823
P ARDL+ LLV + RLG ++G +K HPFFE + W + PP+L
Sbjct: 257 P----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 308
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 97/152 (63%), Gaps = 6/152 (3%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTS---CLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
F+L K LG G G V+L + I S L+A+KV+ L R ++ R + ER+I+ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEV 83
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HPF+ L F TE L++++ GGDL K+ F+E+ +FY+AE+ LAL++
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDH 141
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
LH LG++YRDLKPENIL+ E+GHI L+DF LS
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
++ SF GT EY+APE++ GH S DWW+FG+ +FE+L G PF+G ET++ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNW-ALIRCAVP 820
L P + +S A+ L+R L + P NRLGA G EIK+H FF ++W L R +
Sbjct: 242 KLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 821 P 821
P
Sbjct: 300 P 300
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 97/151 (64%), Gaps = 6/151 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTS---CLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
F+L K LG G G V+L + I S L+A+KV+ L R ++ R + ER+I+ ++
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVN 85
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
HPF+ L F TE L++++ GGDL K+ F+E+ +FY+AE+ LAL++L
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHL 143
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H LG++YRDLKPENIL+ E+GHI L+DF LS
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS 174
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
++ SF GT EY+APE++ GH S DWW+FG+ +FE+L G PF+G ET++ ++
Sbjct: 183 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 242
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNW-ALIRCAVP 820
L P + +S A+ L+R L + P NRLGA G EIK+H FF ++W L R +
Sbjct: 243 KLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 300
Query: 821 P 821
P
Sbjct: 301 P 301
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 97/151 (64%), Gaps = 6/151 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTS---CLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
F+L K LG G G V+L + I S L+A+KV+ L R ++ R + ER+I+ ++
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVN 84
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
HPF+ L F TE L++++ GGDL K+ F+E+ +FY+AE+ LAL++L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHL 142
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H LG++YRDLKPENIL+ E+GHI L+DF LS
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLS 173
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
++ SF GT EY+APE++ GH S DWW+FG+ +FE+L G PF+G ET++ ++
Sbjct: 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA 241
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNW-ALIRCAVP 820
L P + +S A+ L+R L + P NRLGA G EIK+H FF ++W L R +
Sbjct: 242 KLGMPQF--LSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIH 299
Query: 821 P 821
P
Sbjct: 300 P 300
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 96/152 (63%), Gaps = 6/152 (3%)
Query: 471 HFKLHKKLGCGDIGTVYLAELI---GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
HF+L K LG G G V+L + + L+A+KV+ L R ++ R + ER+I+ +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV-RTKMERDILADV 87
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HPF+ L F TE L++++ GGDL K+ F+E+ +FY+AE+ L L++
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALGLDH 145
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
LH LG++YRDLKPENIL+ E+GHI L+DF LS
Sbjct: 146 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLS 177
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
++ SF GT EY+APE++ +GH S DWW++G+ +FE+L G PF+G ET++ ++
Sbjct: 186 KAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKA 245
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNW-ALIRCAVP 820
L P + +S A+ L+R L + P NRLG+ GA EIK+H F+ ++W L R +
Sbjct: 246 KLGMPQF--LSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIK 303
Query: 821 P 821
P
Sbjct: 304 P 304
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 151
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+ +
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 245 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 300
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 301 NLHQQTPPKL 310
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 151
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+ +
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 245 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 300
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 301 NLHQQTPPKL 310
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 70
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 71 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 128
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 129 GIIHRDLKPENILLNEDMHIQITDF 153
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 162 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 221
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 222 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 277
Query: 814 LIRCAVPPE 822
+ PP+
Sbjct: 278 NLHQQTPPK 286
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 149
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 243 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 298
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 299 NLHQQTPPKL 308
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 151
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 245 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 300
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 301 NLHQQTPPKL 310
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 149
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 243 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 298
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 299 NLHQQTPPKL 308
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 152
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDF 177
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 186 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 246 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 301
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 302 NLHQQTPPKL 311
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 151
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 245 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 300
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 301 NLHQQTPPKL 310
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 69
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 70 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 127
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 128 GIIHRDLKPENILLNEDMHIQITDF 152
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 220
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 221 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 276
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 277 NLHQQTPPKL 286
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 71
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 72 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 129
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 130 GIIHRDLKPENILLNEDMHIQITDF 154
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 163 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 222
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 223 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 278
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 279 NLHQQTPPKL 288
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 154
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDF 179
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 188 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 247
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 248 KIIKLEYDFPAAFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 303
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 304 NLHQQTPPKL 313
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 68
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 69 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 126
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 127 GIIHRDLKPENILLNEDMHIQITDF 151
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 219
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 220 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 275
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 276 NLHQQTPPKL 285
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 151
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDF 176
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 245 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 300
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 301 NLHQQTPPKL 310
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDF 158
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 167 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 226
Query: 758 NVVSQSLRFP--GYPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 227 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 282
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 283 NLHQQTPPKL 292
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+ + F+LHK LG G G V+LAE T+ FA+K + D ++ + E+ ++ +
Sbjct: 15 LKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 74
Query: 527 -LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
+HPFL +F F T++ VMEY GGDL + Q F A FY AE++L L
Sbjct: 75 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
++LH G+VYRDLK +NIL+ +DGHI ++DF +
Sbjct: 133 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 165
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 74/112 (66%), Gaps = 7/112 (6%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
A++N F GT +Y+APEI+ G+ + SVDWW+FG+ L+E+L G++PF G +E ++
Sbjct: 174 AKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 233
Query: 762 QSLRFPGYP-VVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNW 812
+ P YP + A+DL+ L V+EP+ RLG V+G +I+QHP F +NW
Sbjct: 234 DN---PFYPRWLEKEAKDLLVKLFVREPEKRLG-VRG--DIRQHPLFREINW 279
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F K LG G G V L T +A+K++ + ++ + ++ TE ++Q
Sbjct: 7 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 66
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R F+E+ ARFY AE++ ALE
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 122
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 154
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA +F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF ++ ++
Sbjct: 162 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 221
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNWALI--RC 817
+ +RFP +S A+ L+ GLL K+P RLG A E+ +H FF +NW + +
Sbjct: 222 MEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 279
Query: 818 AVPPELPRSCDAV 830
+PP P+ V
Sbjct: 280 LLPPFKPQVTSEV 292
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 148
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDF 173
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 182 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 758 NVVSQSLRFP--GYPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 242 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 297
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 298 NLHQQTPPKL 307
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 85/145 (58%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G TV LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 99 FVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 156
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDF 181
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 249
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 250 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 305
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 306 NLHQQTPPKL 315
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F K LG G G V L T +A+K++ + ++ + ++ TE ++Q
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R F+E+ ARFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA +F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF ++ ++
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNWALI--RC 817
+ +RFP +S A+ L+ GLL K+P RLG A E+ +H FF +NW + +
Sbjct: 219 MEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 818 AVPPELPRSCDAV 830
+PP P+ V
Sbjct: 277 LLPPFKPQVTSEV 289
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F K LG G G V L T +A+K++ + ++ + ++ TE ++Q
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R F+E+ ARFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA +F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF ++ ++
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNWALI--RC 817
+ +RFP +S A+ L+ GLL K+P RLG A E+ +H FF +NW + +
Sbjct: 219 MEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 818 AVPPELPRSCDAV 830
+PP P+ V
Sbjct: 277 LLPPFKPQVTSEV 289
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+++ + G+I ++DF L+ R
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F K LG G G V L T +A+K++ + ++ + ++ TE ++Q
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R F+E+ ARFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF ++ ++
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNWALI--RC 817
+ +RFP +S A+ L+ GLL K+P RLG A E+ +H FF +NW + +
Sbjct: 219 MEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 818 AVPPELPRSCDAV 830
+PP P+ V
Sbjct: 277 LLPPFKPQVTSEV 289
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F+ K LG G G V L + T +A+K++ + +V + ++ TE ++Q
Sbjct: 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 206
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R FSE ARFY AE++ AL+
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 262
Query: 587 YLHM-LGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRDLK EN+++ +DGHI ++DF L
Sbjct: 263 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 295
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA +F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF +++ ++
Sbjct: 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 362
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRL-GAVKGAAEIKQHPFFEGLNW 812
+ +RFP + A+ L+ GLL K+P RL G + A EI QH FF G+ W
Sbjct: 363 MEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 413
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F K LG G G V L T +A+K++ + ++ + ++ TE ++Q
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R F+E+ ARFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF ++ ++
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNWALI--RC 817
+ +RFP +S A+ L+ GLL K+P RLG A E+ +H FF +NW + +
Sbjct: 219 MEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 818 AVPPELPRSCDAV 830
+PP P+ V
Sbjct: 277 LLPPFKPQVTSEV 289
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F+ K LG G G V L + T +A+K++ + +V + ++ TE ++Q
Sbjct: 150 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 209
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R FSE ARFY AE++ AL+
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 265
Query: 587 YLHM-LGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRDLK EN+++ +DGHI ++DF L
Sbjct: 266 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 298
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 3/113 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA +F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF +++ ++
Sbjct: 306 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 365
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRL-GAVKGAAEIKQHPFFEGLNW 812
+ +RFP + A+ L+ GLL K+P RL G + A EI QH FF G+ W
Sbjct: 366 MEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 416
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F K LG G G V L T +A+K++ + ++ + ++ TE ++Q
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R F+E+ ARFY AE++ ALE
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 119
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 151
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF ++ ++
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNWALI--RC 817
+ +RFP +S A+ L+ GLL K+P RLG A E+ +H FF +NW + +
Sbjct: 219 MEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 276
Query: 818 AVPPELPRSCDAV 830
+PP P+ V
Sbjct: 277 LLPPFKPQVTSEV 289
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F K LG G G V L T +A+K++ + ++ + ++ TE ++Q
Sbjct: 9 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 68
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R F+E+ ARFY AE++ ALE
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE----RVFTEERARFYGAEIVSALE 124
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRD+K EN+++ +DGHI ++DF L
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGL 156
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 74/133 (55%), Gaps = 5/133 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF ++ ++
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 223
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNWALI--RC 817
+ +RFP +S A+ L+ GLL K+P RLG A E+ +H FF +NW + +
Sbjct: 224 MEEIRFP--RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKK 281
Query: 818 AVPPELPRSCDAV 830
+PP P+ V
Sbjct: 282 LLPPFKPQVTSEV 294
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K +G G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGGD+ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 84/145 (57%), Gaps = 2/145 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
FK K LG G T LA + TS +A+K+++ ++ K+P ER++M LDHPF
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+ F ++ + Y G+L +K S F E RFY AE++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVSALEYLHGK 149
Query: 592 GVVYRDLKPENILVREDGHIMLSDF 616
G+++RDLKPENIL+ ED HI ++DF
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDF 174
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
E AR+N FVGT +Y++PE++ + S D W G +++L+ G PF+
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 758 NVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEGLNWA 813
++ FP +P ARDL+ LLV + RLG ++G +K HPFFE + W
Sbjct: 243 KIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWE 298
Query: 814 LIRCAVPPEL 823
+ PP+L
Sbjct: 299 NLHQQTPPKL 308
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ + GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + T FA+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K +G G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGGD+ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 92/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+++ + G+I ++DF L+ R
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 89/153 (58%), Gaps = 3/153 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+ + F LHK LG G G V+LAE T+ FA+K + D ++ + E+ ++ +
Sbjct: 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSL 73
Query: 527 -LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
+HPFL +F F T++ VMEY GGDL + Q F A FY AE++L L
Sbjct: 74 AWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGL 131
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
++LH G+VYRDLK +NIL+ +DGHI ++DF +
Sbjct: 132 QFLHSKGIVYRDLKLDNILLDKDGHIKIADFGM 164
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 74/112 (66%), Gaps = 7/112 (6%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
A++N F GT +Y+APEI+ G+ + SVDWW+FG+ L+E+L G++PF G +E ++
Sbjct: 173 AKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM 232
Query: 762 QSLRFPGYP-VVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNW 812
+ P YP + A+DL+ L V+EP+ RLG V+G +I+QHP F +NW
Sbjct: 233 DN---PFYPRWLEKEAKDLLVKLFVREPEKRLG-VRG--DIRQHPLFREINW 278
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + T FA+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + T FA+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 141
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 142 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 177
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ + GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 179 GRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 238
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 239 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKV 296
Query: 819 VPPELPR 825
P +P+
Sbjct: 297 EAPFIPK 303
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/159 (40%), Positives = 99/159 (62%), Gaps = 9/159 (5%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIG---TSCLFALKVMDNDFLVGRKKMP-RAQTERE 522
+G+ +F+L K LG G G V+L I T L+A+KV+ +V + K +TER+
Sbjct: 51 VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 110
Query: 523 IMQMLDH-PFLPTLFAHFTTEKFSCLVMEYCPGGDLHV-LRQKQPSRFFSEQAARFYVAE 580
+++ + PFL TL F TE L+++Y GG+L L Q++ F+E + YV E
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER---FTEHEVQIYVGE 167
Query: 581 VLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++LALE+LH LG++YRD+K ENIL+ +GH++L+DF LS
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/115 (42%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 703 RSNSFVGTHEYLAPEIIKG--EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
R+ F GT EY+AP+I++G GH +VDWW+ G+ ++ELL G +PF G + + +
Sbjct: 216 RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS 275
Query: 761 SQSLRF-PGYPV-VSFHARDLIRGLLVKEPDNRLG-AVKGAAEIKQHPFFEGLNW 812
+ L+ P YP +S A+DLI+ LL+K+P RLG + A EIK+H FF+ +NW
Sbjct: 276 RRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINW 330
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 91/156 (58%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K +G G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F+ K LG G G V L + T +A+K++ + +V + ++ TE ++Q
Sbjct: 8 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 67
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R FSE ARFY AE++ AL+
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 123
Query: 587 YLHM-LGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRDLK EN+++ +DGHI ++DF L
Sbjct: 124 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 156
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF +++ ++
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 223
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRL-GAVKGAAEIKQHPFFEGLNW 812
+ +RFP + A+ L+ GLL K+P RL G + A EI QH FF G+ W
Sbjct: 224 MEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 274
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F+ K LG G G V L + T +A+K++ + +V + ++ TE ++Q
Sbjct: 7 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 66
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R FSE ARFY AE++ AL+
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 122
Query: 587 YLHM-LGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRDLK EN+++ +DGHI ++DF L
Sbjct: 123 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 155
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF +++ ++
Sbjct: 163 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 222
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRL-GAVKGAAEIKQHPFFEGLNW 812
+ +RFP + A+ L+ GLL K+P RL G + A EI QH FF G+ W
Sbjct: 223 MEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 273
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 176
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 214 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 273
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 274 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 331
Query: 819 VPPELPR 825
P +P+
Sbjct: 332 EAPFIPK 338
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/153 (41%), Positives = 89/153 (58%), Gaps = 7/153 (4%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M F+ K LG G G V L + T +A+K++ + +V + ++ TE ++Q
Sbjct: 9 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSR 68
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HPFL L F T C VMEY GG+L H+ R+ R FSE ARFY AE++ AL+
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE----RVFSEDRARFYGAEIVSALD 124
Query: 587 YLHM-LGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH VVYRDLK EN+++ +DGHI ++DF L
Sbjct: 125 YLHSEKNVVYRDLKLENLMLDKDGHIKITDFGL 157
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
GA F GT EYLAPE+++ +G +VDWW G+ ++E++ GR PF +++ ++
Sbjct: 165 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 224
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRL-GAVKGAAEIKQHPFFEGLNW 812
+ +RFP + A+ L+ GLL K+P RL G + A EI QH FF G+ W
Sbjct: 225 MEEIRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 275
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + F E ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +I H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + F E ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + F E ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 148
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 186 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 245
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 246 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 303
Query: 819 VPPELPR 825
P +P+
Sbjct: 304 EAPFIPK 310
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + F E ARFY A+++L E
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+G+ +F+ + LG G G V LA + T L+A+KV+ D ++ + TE+ I+ +
Sbjct: 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSL 79
Query: 527 L-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
+HPFL LF F T VME+ GGDL QK SR F E ARFY AE++ AL
Sbjct: 80 ARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISAL 137
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+LH G++YRDLK +N+L+ +GH L+DF +
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGM 170
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 6/130 (4%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + +F GT +Y+APEI++ +G +VDWW G+ L+E+L G PF+ D+ +
Sbjct: 177 NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 236
Query: 760 VSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAE--IKQHPFFEGLNWALI-- 815
++ + +P + + A +++ + K P RLG++ E I +HPFF+ ++WA +
Sbjct: 237 LNDEVVYPTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNH 294
Query: 816 RCAVPPELPR 825
R PP PR
Sbjct: 295 RQIEPPFRPR 304
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + F E ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Query: 462 KQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTER 521
K +G++ F L + +G G V L L T ++A+KV+ + + + + QTE+
Sbjct: 12 KASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEK 71
Query: 522 EIM-QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAE 580
+ Q +HPFL L + F TE V+EY GGDL Q+Q R E+ ARFY AE
Sbjct: 72 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAE 129
Query: 581 VLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ LAL YLH G++YRDLK +N+L+ +GHI L+D+ +
Sbjct: 130 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 15/137 (10%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGN-------- 752
G ++ F GT Y+APEI++GE +G SVDWW G+ +FE++ GR+PF G+
Sbjct: 175 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 234
Query: 753 -DETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV--KGAAEIKQHPFFEG 809
D ++ + +R P +S A +++ L K+P RLG + G A+I+ HPFF
Sbjct: 235 EDYLFQVILEKQIRIP--RSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRN 292
Query: 810 LNWALI--RCAVPPELP 824
++W ++ + VPP P
Sbjct: 293 VDWDMMEQKQVVPPFKP 309
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 91/151 (60%), Gaps = 2/151 (1%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
++ F++ + LG G G V+L +A+KV+ + +V K++ ER ++ ++
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 64
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
HPF+ ++ F + ++M+Y GG+L L +K S+ F A+FY AEV LALEYL
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYL 122
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H ++YRDLKPENIL+ ++GHI ++DF +
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFA 153
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 709 GTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFPG 768
GT +Y+APE++ + + S+DWW+FGI ++E+L G TPF S +T +++ LRFP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP- 223
Query: 769 YPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNW 812
P + +DL+ L+ ++ RLG ++ G ++K HP+F+ + W
Sbjct: 224 -PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW 267
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 91/158 (57%), Gaps = 3/158 (1%)
Query: 462 KQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTER 521
K +G++ F L + +G G V L L T ++A++V+ + + + + QTE+
Sbjct: 44 KASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEK 103
Query: 522 EIM-QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAE 580
+ Q +HPFL L + F TE V+EY GGDL Q+Q R E+ ARFY AE
Sbjct: 104 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAE 161
Query: 581 VLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ LAL YLH G++YRDLK +N+L+ +GHI L+D+ +
Sbjct: 162 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 199
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 15/137 (10%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGN-------- 752
G +++F GT Y+APEI++GE +G SVDWW G+ +FE++ GR+PF G+
Sbjct: 207 GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 266
Query: 753 -DETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEG 809
D ++ + +R P +S A +++ L K+P RLG G A+I+ HPFF
Sbjct: 267 EDYLFQVILEKQIRIP--RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 324
Query: 810 LNWALI--RCAVPPELP 824
++W ++ + VPP P
Sbjct: 325 VDWDMMEQKQVVPPFKP 341
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ K LG G G V L + T +A+K++D +V K++ E+ I+Q ++
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY PGG++ H+ R + F E ARFY A+++L E
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 148
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 149 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 186 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 245
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 246 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 303
Query: 819 VPPELPR 825
P +P+
Sbjct: 304 EAPFIPK 310
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIM-Q 525
+G++ F L + +G G V L L T ++A+KV+ + + + + QTE+ + Q
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 526 MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
+HPFL L + F TE V+EY GGDL Q+Q R E+ ARFY AE+ LAL
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 119
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH G++YRDLK +N+L+ +GHI L+D+ +
Sbjct: 120 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 152
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGN-------- 752
G ++ F GT Y+APEI++GE +G SVDWW G+ +FE++ GR+PF G+
Sbjct: 160 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 219
Query: 753 -DETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEG 809
D ++ + +R P +S A +++ L K+P RLG G A+I+ HPFF
Sbjct: 220 EDYLFQVILEKQIRIP--RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 277
Query: 810 LNWALI--RCAVPPELP 824
++W ++ + VPP P
Sbjct: 278 VDWDMMEQKQVVPPFKP 294
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 90/153 (58%), Gaps = 3/153 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIM-Q 525
+G++ F L + +G G V L L T ++A+KV+ + + + + QTE+ + Q
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 526 MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
+HPFL L + F TE V+EY GGDL Q+Q R E+ ARFY AE+ LAL
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLAL 123
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
YLH G++YRDLK +N+L+ +GHI L+D+ +
Sbjct: 124 NYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 76/137 (55%), Gaps = 15/137 (10%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGN-------- 752
G ++ F GT Y+APEI++GE +G SVDWW G+ +FE++ GR+PF G+
Sbjct: 164 GDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT 223
Query: 753 -DETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGA--VKGAAEIKQHPFFEG 809
D ++ + +R P +S A +++ L K+P RLG G A+I+ HPFF
Sbjct: 224 EDYLFQVILEKQIRIP--RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281
Query: 810 LNWALI--RCAVPPELP 824
++W ++ + VPP P
Sbjct: 282 VDWDMMEQKQVVPPFKP 298
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 89/156 (57%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F+ + LG G G V L + T +A+K++D +V K++ E+ I Q ++
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +V+EY PGG++ H+ R + FSE ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 192
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 142
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ E G+I ++DF + R
Sbjct: 143 YLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV 178
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 180 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 239
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 240 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 297
Query: 819 VPPELPR 825
P +P+
Sbjct: 298 EAPFIPK 304
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G + G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT E LAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++++ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAP II +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 176
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Query: 709 GTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFPG 768
GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS +RFP
Sbjct: 221 GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS 280
Query: 769 YPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCAVPPELPR 825
+ S +DL+R LL + R G +K G +IK H +F +W I R P +P+
Sbjct: 281 H--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPK 338
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 156
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 157 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 194 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 254 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 311
Query: 819 VPPELPR 825
P +P+
Sbjct: 312 EAPFIPK 318
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + FSE ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FSEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+++ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIM-QMLDHP 530
F K +G G G V LA +A+KV+ ++ +K+ +ER ++ + + HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FL L F T V++Y GG+L Q++ R F E ARFY AE+ AL YLH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHS 157
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDL 618
L +VYRDLKPENIL+ GHI+L+DF L
Sbjct: 158 LNIVYRDLKPENILLDSQGHIVLTDFGL 185
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 3/121 (2%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
+ +++F GT EYLAPE++ + + +VDWW G L+E+LYG PF E N+++
Sbjct: 194 STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNW-ALIRCAVP 820
+ L+ P ++ AR L+ GLL K+ RLGA EIK H FF +NW LI +
Sbjct: 254 KPLQLK--PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKIT 311
Query: 821 P 821
P
Sbjct: 312 P 312
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 88/156 (56%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + F+E ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FAEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + F E ARFY A+++L E
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 176
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 177 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 214 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 273
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 274 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 331
Query: 819 VPPELPR 825
P +P+
Sbjct: 332 EAPFIPK 338
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + F E ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + F E ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + F E ARFY A+++L E
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 155
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 156 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 193 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 252
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 253 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 310
Query: 819 VPPELPR 825
P +P+
Sbjct: 311 EAPFIPK 317
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 6/156 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F K LG G G V L + + +A+K++D +V K++ E+ I+Q ++
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
PFL L F +VMEY GG++ H+ R + F E ARFY A+++L E
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR----FXEPHARFYAAQIVLTFE 150
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
YLH L ++YRDLKPEN+L+ + G+I ++DF + R
Sbjct: 151 YLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 186
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
R+ GT EYLAPEII +G+ +VDWW G+ ++E+ G PF + +VS
Sbjct: 188 GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS 247
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK-GAAEIKQHPFFEGLNWALI--RCA 818
+RFP + S +DL+R LL + R G +K G +IK H +F +W I R
Sbjct: 248 GKVRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKV 305
Query: 819 VPPELPR 825
P +P+
Sbjct: 306 EAPFIPK 312
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELI---GTSCLFALKVMDNDFLV-GRKKMPRAQTEREIMQML 527
F+L + LG G G V+ + T +FA+KV+ +V K + ER I++ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HPF+ L F T L++EY GG+L + Q + F E A FY+AE+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFM--QLEREGIFMEDTACFYLAEISMALGH 136
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
LH G++YRDLKPENI++ GH+ L+DF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 73/127 (57%), Gaps = 5/127 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G ++ F GT EY+APEI+ GH +VDWW+ G ++++L G PF G +T+ ++
Sbjct: 175 GTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKG-AAEIKQHPFFEGLNWA--LIRC 817
L P P ++ ARDL++ LL + +RLGA G A E++ HPFF +NW L R
Sbjct: 235 KCKLNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARK 292
Query: 818 AVPPELP 824
PP P
Sbjct: 293 VEPPFKP 299
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 6/151 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELI---GTSCLFALKVMDNDFLV-GRKKMPRAQTEREIMQML 527
F+L + LG G G V+ + T +FA+KV+ +V K + ER I++ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HPF+ L F T L++EY GG+L + Q + F E A FY+AE+ +AL +
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFM--QLEREGIFMEDTACFYLAEISMALGH 136
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
LH G++YRDLKPENI++ GH+ L+DF L
Sbjct: 137 LHQKGIIYRDLKPENIMLNHQGHVKLTDFGL 167
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 5/127 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G +++F GT EY+APEI+ GH +VDWW+ G ++++L G PF G +T+ ++
Sbjct: 175 GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKIL 234
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKG-AAEIKQHPFFEGLNWA--LIRC 817
L P P ++ ARDL++ LL + +RLGA G A E++ HPFF +NW L R
Sbjct: 235 KCKLNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARK 292
Query: 818 AVPPELP 824
PP P
Sbjct: 293 VEPPFKP 299
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + F GT +Y+APEII + +G SVDWW FG+ L+E+L G+ PF+G DE +++
Sbjct: 175 GVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 234
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLG-AVKGAAEIKQHPFFEGLNW-ALIRCA 818
++ +P +S A + +GL+ K P RLG +G +IK+H FF ++W L R
Sbjct: 235 EHNVAYP--KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKE 292
Query: 819 V-PPELPRSC 827
+ PP P++C
Sbjct: 293 IQPPYKPKAC 302
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
M + F LG G G V L+E GT L+A+K++ D ++ + E+ ++ +
Sbjct: 17 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 76
Query: 527 LDHP-FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
P FL L + F T VMEY GGDL + +Q RF E A FY AE+ + L
Sbjct: 77 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGRF-KEPHAVFYAAEIAIGL 134
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+L G++YRDLK +N+++ +GHI ++DF +
Sbjct: 135 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 167
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
M +++ K +G G G V L T ++A+K++ ++ R ER+IM
Sbjct: 66 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 125
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
+ P++ LF F +++ +VMEY PGGDL L E+ ARFY AEV+LAL+
Sbjct: 126 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLALD 182
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDF 616
+H +G ++RD+KP+N+L+ + GH+ L+DF
Sbjct: 183 AIHSMGFIHRDVKPDNMLLDKSGHLKLADF 212
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEG----HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
R ++ VGT +Y++PE++K +G +G DWW+ G+FL+E+L G TPF T S
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 283
Query: 758 NVVSQ--SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWAL- 814
+++ SL FP +S A++LI L + + RLG G EIK+H FF+ WA
Sbjct: 284 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGR-NGVEEIKRHLFFKNDQWAWE 341
Query: 815 -IRCAVPPELPRSCDAVIGSQKKESTKCEESKG 846
+R V P +P + S + EE KG
Sbjct: 342 TLRDTVAPVVPDLSSDIDTSNFDD---LEEDKG 371
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
M +++ K +G G G V L T ++A+K++ ++ R ER+IM
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
+ P++ LF F +++ +VMEY PGGDL L E+ ARFY AEV+LAL+
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLALD 187
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDF 616
+H +G ++RD+KP+N+L+ + GH+ L+DF
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEG----HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
R ++ VGT +Y++PE++K +G +G DWW+ G+FL+E+L G TPF T S
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 758 NVVSQ--SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWAL- 814
+++ SL FP +S A++LI L + + RLG G EIK+H FF+ WA
Sbjct: 289 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGR-NGVEEIKRHLFFKNDQWAWE 346
Query: 815 -IRCAVPPELPRSCDAVIGSQKKESTKCEESKG 846
+R V P +P + S + EE KG
Sbjct: 347 TLRDTVAPVVPDLSSDIDTSNFDD---LEEDKG 376
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 4/160 (2%)
Query: 458 RCVQKQHGC-MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPR 516
+ V+K G M + + K +G G G V L + ++A+K++ ++ R
Sbjct: 62 KIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAF 121
Query: 517 AQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
ER+IM + P++ LF F +K+ +VMEY PGGDL L E+ A+F
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKF 178
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDF 616
Y AEV+LAL+ +H +G+++RD+KP+N+L+ + GH+ L+DF
Sbjct: 179 YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADF 218
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 705 NSFVGTHEYLAPEIIKGEG----HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
++ VGT +Y++PE++K +G +G DWW+ G+FLFE+L G TPF T S ++
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIM 292
Query: 761 SQ--SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEG--LNWALIR 816
SL FP +S HA++LI L + + RLG G EIKQHPFF+ NW IR
Sbjct: 293 DHKNSLCFPEDAEISKHAKNLICAFLT-DREVRLGR-NGVEEIKQHPFFKNDQWNWDNIR 350
Query: 817 CAVPPELP 824
P +P
Sbjct: 351 ETAAPVVP 358
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
HF++ + +G G G V + + T ++A+K M+ V R ++ E +IMQ L+HP
Sbjct: 16 HFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHP 75
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FL L+ F E+ +V++ GGDL Q + F E+ + ++ E+++AL+YL
Sbjct: 76 FLVNLWYSFQDEEDMFMVVDLLLGGDLRY--HLQQNVHFKEETVKLFICELVMALDYLQN 133
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RD+KP+NIL+ E GH+ ++DF+++
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIA 162
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 699 PTGARSNSFVGTHEYLAPEII---KGEGHGSSVDWWTFGIFLFELLYGRTPF---KGSGN 752
P + + GT Y+APE+ KG G+ +VDWW+ G+ +ELL GR P+ + +
Sbjct: 166 PRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 753 DETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNW 812
E + + + +P S L++ LL PD R + ++++ P+ +NW
Sbjct: 226 KEIVHTFETTVVTYPS--AWSQEMVSLLKKLLEPNPDQRFSQL---SDVQNFPYMNDINW 280
Query: 813 A------LIRCAVPPELPRSCD 828
LI +P + +CD
Sbjct: 281 DAVFQKRLIPGFIPNKGRLNCD 302
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 86/150 (57%), Gaps = 3/150 (2%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
M +++ K +G G G V L T ++A+K++ ++ R ER+IM
Sbjct: 71 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF 130
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
+ P++ LF F +++ +VMEY PGGDL L E+ ARFY AEV+LAL+
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV---PEKWARFYTAEVVLALD 187
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDF 616
+H +G ++RD+KP+N+L+ + GH+ L+DF
Sbjct: 188 AIHSMGFIHRDVKPDNMLLDKSGHLKLADF 217
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 13/153 (8%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEG----HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
R ++ VGT +Y++PE++K +G +G DWW+ G+FL+E+L G TPF T S
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 758 NVVSQ--SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWAL- 814
+++ SL FP +S A++LI L + + RLG G EIK+H FF+ WA
Sbjct: 289 KIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRLGR-NGVEEIKRHLFFKNDQWAWE 346
Query: 815 -IRCAVPPELPRSCDAVIGSQKKESTKCEESKG 846
+R V P +P + S + EE KG
Sbjct: 347 TLRDTVAPVVPDLSSDIDTSNFDD---LEEDKG 376
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + F GT +Y+APEII + +G SVDWW FG+ L+E+L G+ PF+G DE +++
Sbjct: 496 GVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM 555
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLG-AVKGAAEIKQHPFFEGLNW-ALIRCA 818
++ +P +S A + +GL+ K P RLG +G +IK+H FF ++W L R
Sbjct: 556 EHNVAYP--KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKE 613
Query: 819 V-PPELPRS 826
+ PP P++
Sbjct: 614 IQPPYKPKA 622
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 82/153 (53%), Gaps = 3/153 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
M + F LG G G V L+E GT L+A+K++ D ++ + E+ ++ +
Sbjct: 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLAL 397
Query: 527 LDHP-FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
P FL L + F T VMEY GGDL + +Q RF E A FY AE+ + L
Sbjct: 398 PGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDL-MYHIQQVGRF-KEPHAVFYAAEIAIGL 455
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+L G++YRDLK +N+++ +GHI ++DF +
Sbjct: 456 FFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGM 488
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 75/130 (57%), Gaps = 5/130 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + F GT +Y+APEII + +G SVDWW +G+ L+E+L G+ PF G DE +++
Sbjct: 174 GVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM 233
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLG-AVKGAAEIKQHPFFEGLNWALI--RC 817
++ +P +S A + +GL+ K P RLG +G ++++H FF ++W + R
Sbjct: 234 EHNVSYP--KSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENRE 291
Query: 818 AVPPELPRSC 827
PP P+ C
Sbjct: 292 IQPPFKPKVC 301
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 82/151 (54%), Gaps = 3/151 (1%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ F LG G G V LA+ GT L+A+K++ D ++ + E+ ++ +LD
Sbjct: 18 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLD 77
Query: 529 HP-FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
P FL L + F T VMEY GGDL + Q F E A FY AE+ + L +
Sbjct: 78 KPPFLTQLHSCFQTVDRLYFVMEYVNGGDL--MYHIQQVGKFKEPQAVFYAAEISIGLFF 135
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
LH G++YRDLK +N+++ +GHI ++DF +
Sbjct: 136 LHKRGIIYRDLKLDNVMLDSEGHIKIADFGM 166
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 101/175 (57%), Gaps = 1/175 (0%)
Query: 447 HMSNDLRWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDND 506
++++ L+W V+ + + F++ K +G G V + ++ T ++A+K+M+
Sbjct: 38 YVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKW 97
Query: 507 FLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPS 566
++ R ++ + ER+++ D ++ L F E + LVMEY GGDL L K
Sbjct: 98 DMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE 157
Query: 567 RFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLR 621
R +E A RFY+AE+++A++ +H LG V+RD+KP+NIL+ GHI L+DF L+
Sbjct: 158 RIPAEMA-RFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 71/136 (52%), Gaps = 18/136 (13%)
Query: 702 ARSNSFVGTHEYLAPEIIKG-------EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDE 754
RS VGT +YL+PEI++ +G DWW G+F +E+ YG+TPF E
Sbjct: 218 VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277
Query: 755 TLSNVV--SQSLRFP----GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
T +V + L P G P ARD I+ LL P+ RLG GA + + HPFF
Sbjct: 278 TYGKIVHYKEHLSLPLVDEGVPE---EARDFIQRLLCP-PETRLGR-GGAGDFRTHPFFF 332
Query: 809 GLNWALIRCAVPPELP 824
GL+W +R +VPP P
Sbjct: 333 GLDWDGLRDSVPPFTP 348
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 89/150 (59%), Gaps = 1/150 (0%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F++ K +G G G V + +L +FA+K+++ ++ R + + ER+++ D +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ TL F + LVM+Y GGDL L K R E+ ARFY+AE+++A++ +H L
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRL-PEEMARFYLAEMVIAIDSVHQL 194
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSLR 621
V+RD+KP+NIL+ +GHI L+DF L+
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLK 224
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 81/138 (58%), Gaps = 12/138 (8%)
Query: 696 VVEPTGARSNSFVGTHEYLAPEIIK----GEG-HGSSVDWWTFGIFLFELLYGRTPFKGS 750
++E +S+ VGT +Y++PEI++ G+G +G DWW+ G+ ++E+LYG TPF
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 751 GNDETLSNVVSQSLRFPGYPV----VSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
ET +++ RF +P VS +A+DLIR L+ ++RLG G + K+HPF
Sbjct: 285 SLVETYGKIMNHKERFQ-FPTQVTDVSENAKDLIRRLICSR-EHRLGQ-NGIEDFKKHPF 341
Query: 807 FEGLNWALIRCAVPPELP 824
F G++W IR P +P
Sbjct: 342 FSGIDWDNIRNCEAPYIP 359
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+ M F +H+ +G G G VY T ++A+K +D + ++ A ER ++ +
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 244
Query: 527 L---DHPFLPTL-FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVL 582
+ D PF+ + +A T +K S +++ GGDLH + FSE RFY AE++
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEII 301
Query: 583 LALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L LE++H VVYRDLKP NIL+ E GH+ +SD L+
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 338
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 708 VGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFELLYGRTPF---KGSGNDETLSNVVSQS 763
VGTH Y+APE++ KG + SS DW++ G LF+LL G +PF K E ++ +
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 409
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNWALIRCA-VPP 821
+ P S R L+ GLL ++ + RLG + +GA E+K+ PFF L+W ++ PP
Sbjct: 410 VELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 467
Query: 822 EL--PR----SCDAV-IGSQKKESTK 840
L PR + DA IGS +E TK
Sbjct: 468 PLIPPRGEVNAADAFDIGSFDEEDTK 493
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+ M F +H+ +G G G VY T ++A+K +D + ++ A ER ++ +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 527 L---DHPFLPTL-FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVL 582
+ D PF+ + +A T +K S +++ GGDLH + FSE RFY AE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEII 302
Query: 583 LALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L LE++H VVYRDLKP NIL+ E GH+ +SD L+
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 81/146 (55%), Gaps = 15/146 (10%)
Query: 708 VGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFELLYGRTPF---KGSGNDETLSNVVSQS 763
VGTH Y+APE++ KG + SS DW++ G LF+LL G +PF K E ++ +
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEGLNWALIRCA-VPP 821
+ P S R L+ GLL ++ + RLG + +GA E+K+ PFF L+W ++ PP
Sbjct: 411 VELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPP 468
Query: 822 EL--PR----SCDAV-IGSQKKESTK 840
L PR + DA IGS +E TK
Sbjct: 469 PLIPPRGEVNAADAFDIGSFDEEDTK 494
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+ M F +H+ +G G G VY T ++A+K +D + ++ A ER ++ +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 527 L---DHPFLPTL-FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVL 582
+ D PF+ + +A T +K S +++ GGDLH + FSE RFY AE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEII 302
Query: 583 LALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L LE++H VVYRDLKP NIL+ E GH+ +SD L+
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 15/159 (9%)
Query: 695 LVVEPTGARSNSFVGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFELLYGRTPF---KGS 750
L + + + ++ VGTH Y+APE++ KG + SS DW++ G LF+LL G +PF K
Sbjct: 338 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 751 GNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEG 809
E ++ ++ P S R L+ GLL ++ + RLG + +GA E+K+ PFF
Sbjct: 398 DKHEIDRMTLTMAVELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
Query: 810 LNWALIRCA-VPPEL--PR----SCDAV-IGSQKKESTK 840
L+W ++ PP L PR + DA IGS +E TK
Sbjct: 456 LDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTK 494
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 87/157 (55%), Gaps = 7/157 (4%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+ M F +H+ +G G G VY T ++A+K +D + ++ A ER ++ +
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL 245
Query: 527 L---DHPFLPTL-FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVL 582
+ D PF+ + +A T +K S +++ GGDLH + FSE RFY AE++
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLS-FILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEII 302
Query: 583 LALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L LE++H VVYRDLKP NIL+ E GH+ +SD L+
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA 339
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 87/159 (54%), Gaps = 15/159 (9%)
Query: 695 LVVEPTGARSNSFVGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFELLYGRTPF---KGS 750
L + + + ++ VGTH Y+APE++ KG + SS DW++ G LF+LL G +PF K
Sbjct: 338 LACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK 397
Query: 751 GNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAV-KGAAEIKQHPFFEG 809
E ++ ++ P S R L+ GLL ++ + RLG + +GA E+K+ PFF
Sbjct: 398 DKHEIDRMTLTMAVELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
Query: 810 LNWALIRCA-VPPEL--PR----SCDAV-IGSQKKESTK 840
L+W ++ PP L PR + DA IGS +E TK
Sbjct: 456 LDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTK 494
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F++ K +G G G V + ++ T ++A+K+++ ++ R + + ER+++ D +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 151
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L F E LVM+Y GGDL L K + E ARFY+ E++LA++ +H L
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEMVLAIDSIHQL 210
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSLR 621
V+RD+KP+N+L+ +GHI L+DF L+
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLK 240
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 10/131 (7%)
Query: 702 ARSNSFVGTHEYLAPEIIK----GEG-HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+S+ VGT +Y++PEI++ G G +G DWW+ G+ ++E+LYG TPF ET
Sbjct: 247 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 306
Query: 757 SNVVS--QSLRFPGYPV-VSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWA 813
+++ + +FP + VS A+DLI+ L+ + RLG G + K+H FFEGLNW
Sbjct: 307 GKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSR-ERRLGQ-NGIEDFKKHAFFEGLNWE 364
Query: 814 LIRCAVPPELP 824
IR P +P
Sbjct: 365 NIRNLEAPYIP 375
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 87/150 (58%), Gaps = 1/150 (0%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F++ K +G G G V + ++ T ++A+K+++ ++ R + + ER+++ D +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQW 135
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L F E LVM+Y GGDL L K + E ARFY+ E++LA++ +H L
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKL-PEDMARFYIGEMVLAIDSIHQL 194
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSLR 621
V+RD+KP+N+L+ +GHI L+DF L+
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLK 224
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 76/131 (58%), Gaps = 10/131 (7%)
Query: 702 ARSNSFVGTHEYLAPEIIK----GEG-HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+S+ VGT +Y++PEI++ G G +G DWW+ G+ ++E+LYG TPF ET
Sbjct: 231 VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY 290
Query: 757 SNVVS--QSLRFPGYPV-VSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWA 813
+++ + +FP + VS A+DLI+ L+ + RLG G + K+H FFEGLNW
Sbjct: 291 GKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSR-ERRLGQ-NGIEDFKKHAFFEGLNWE 348
Query: 814 LIRCAVPPELP 824
IR P +P
Sbjct: 349 NIRNLEAPYIP 359
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 85/152 (55%), Gaps = 8/152 (5%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+++++LH+ +G G V LA I T + A+K+MD + L +PR +TE E ++ L
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLR 66
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
H + L+ T +V+EYCPGG+L +++ Q + SE+ R +++ A+
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR----LSEEETRVVFRQIVSAVA 122
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
Y+H G +RDLKPEN+L E + L DF L
Sbjct: 123 YVHSQGYAHRDLKPENLLFDEYHKLKLIDFGL 154
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 695 LVVEPTGARS---NSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPF 747
L +P G + + G+ Y APE+I+G+ + GS D W+ GI L+ L+ G PF
Sbjct: 154 LCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
MG F + LG G G V+ ++ T L+A K ++ L RK A E++I+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ F+ +L F T+ CLVM GGD+ H+ + + F E A FY A+++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
LE+LH ++YRDLKPEN+L+ +DG++ +SD L++
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSG----NDETLSN 758
++ + GT ++APE++ GE + SVD++ G+ L+E++ R PF+ G N E
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 759 VVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAE-IKQHPFFEGLNWALIRC 817
V+ Q++ +P S ++D LL K+P+ RLG G+ + ++ HP F ++W +
Sbjct: 405 VLEQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 818 AV--PPELPRSCDAVIGSQKKESTKCEESKGAADEHVEFEMF 857
+ PP +P S V ++ KG A E + E F
Sbjct: 463 GMLTPPFVPDS-RTVYAKNIQDVGAFSTVKGVAFEKADTEFF 503
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
MG F + LG G G V+ ++ T L+A K ++ L RK A E++I+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ F+ +L F T+ CLVM GGD+ H+ + + F E A FY A+++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
LE+LH ++YRDLKPEN+L+ +DG++ +SD L++
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSG----NDETLSN 758
++ + GT ++APE++ GE + SVD++ G+ L+E++ R PF+ G N E
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 759 VVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAE-IKQHPFFEGLNWALIRC 817
V+ Q++ +P S ++D LL K+P+ RLG G+ + ++ HP F ++W +
Sbjct: 405 VLEQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 818 AV--PPELPRSCDAVIGSQKKESTKCEESKGAADEHVEFEMF 857
+ PP +P S V ++ KG A E + E F
Sbjct: 463 GMLTPPFVPDS-RTVYAKNIQDVGAFSTVKGVAFEKADTEFF 503
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
MG F + LG G G V+ ++ T L+A K ++ L RK A E++I+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ F+ +L F T+ CLVM GGD+ H+ + + F E A FY A+++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
LE+LH ++YRDLKPEN+L+ +DG++ +SD L++
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSG----NDETLSN 758
++ + GT ++APE++ GE + SVD++ G+ L+E++ R PF+ G N E
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 759 VVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAE-IKQHPFFEGLNWALIRC 817
V+ Q++ +P S ++D LL K+P+ RLG G+ + ++ HP F ++W +
Sbjct: 405 VLEQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 818 AV--PPELPRSCDAVIGSQKKESTKCEESKGAADEHVEFEMF 857
+ PP +P S V ++ KG A E + E F
Sbjct: 463 GMLTPPFVPDS-RTVYAKNIQDVGAFSTVKGVAFEKADTEFF 503
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
MG F + LG G G V+ ++ T L+A K ++ L RK A E++I+
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAK 241
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ F+ +L F T+ CLVM GGD+ H+ + + F E A FY A+++
Sbjct: 242 VHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSG 301
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
LE+LH ++YRDLKPEN+L+ +DG++ +SD L++
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAV 337
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 10/162 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSG----NDETLSN 758
++ + GT ++APE++ GE + SVD++ G+ L+E++ R PF+ G N E
Sbjct: 345 KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQR 404
Query: 759 VVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAE-IKQHPFFEGLNWALIRC 817
V+ Q++ +P S ++D LL K+P+ RLG G+ + ++ HP F ++W +
Sbjct: 405 VLEQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 818 AV--PPELPRSCDAVIGSQKKESTKCEESKGAADEHVEFEMF 857
+ PP +P S V ++ KG A E + E F
Sbjct: 463 GMLTPPFVPDS-RTVYAKCIQDVGAFSTVKGVAFEKADTEFF 503
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 465 GCMGMRH-----FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT 519
G MG R F++ + LG G G VYLA + + ALKV+ L + +
Sbjct: 1 GAMGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E EI L HP + L+ +F L++EY P G V R+ Q F EQ Y+
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYIT 118
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
E+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 159 VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 219 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 262
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 149
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 150 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 182
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 182 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 241
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 242 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 285
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F+ ++ LG G G V ++ T ++A K ++ + RK A E++I++ ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+ +L + T+ CLV+ GGDL H+ Q F E A FY AE+ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
+VYRDLKPENIL+ + GHI +SD L++
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 15/134 (11%)
Query: 688 QVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
++S + V P G VGT Y+APE++K E + S DWW G L+E++ G++PF
Sbjct: 326 RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
Query: 748 ---KGSGNDETLSNVVSQ-----SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
K E + +V + S RF S AR L LL K+P RLG G+A
Sbjct: 386 QQRKKKIKREEVERLVKEVPEEYSERF------SPQARSLCSQLLCKDPAERLGCRGGSA 439
Query: 800 -EIKQHPFFEGLNW 812
E+K+HP F+ LN+
Sbjct: 440 REVKEHPLFKKLNF 453
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+ F++ + LG G G VYLA + + ALKV+ L + + E EI
Sbjct: 31 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 90
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL
Sbjct: 91 LRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALS 148
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 149 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 182
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 182 VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 241
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 242 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 285
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 140
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 141 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 173
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 173 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 232
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 233 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 276
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F+ ++ LG G G V ++ T ++A K ++ + RK A E++I++ ++ F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+ +L + T+ CLV+ GGDL H+ Q F E A FY AE+ LE LH
Sbjct: 246 VVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAG--FPEARAVFYAAEICCGLEDLH 303
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
+VYRDLKPENIL+ + GHI +SD L++
Sbjct: 304 RERIVYRDLKPENILLDDHGHIRISDLGLAV 334
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 15/134 (11%)
Query: 688 QVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
++S + V P G VGT Y+APE++K E + S DWW G L+E++ G++PF
Sbjct: 326 RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
Query: 748 ---KGSGNDETLSNVVSQ-----SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
K E + +V + S RF S AR L LL K+P RLG G+A
Sbjct: 386 QQRKKKIKREEVERLVKEVPEEYSERF------SPQARSLCSQLLCKDPAERLGCRGGSA 439
Query: 800 -EIKQHPFFEGLNW 812
E+K+HP F+ LN+
Sbjct: 440 REVKEHPLFKKLNF 453
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+ F++ + LG G G VYLA + + ALKV+ L + + E EI
Sbjct: 10 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSH 69
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL
Sbjct: 70 LRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALS 127
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 161 VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 221 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PXLREVLEHPW 264
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 82/174 (47%), Gaps = 15/174 (8%)
Query: 447 HMSNDLRWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDND 506
HMS +W + F++ + LG G G VYLA + + ALKV+
Sbjct: 3 HMSKKRQW-------------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA 49
Query: 507 FLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPS 566
L + + E EI L HP + L+ +F L++EY P G V R+ Q
Sbjct: 50 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKL 107
Query: 567 RFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
F EQ Y+ E+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 108 SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 161 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 221 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 264
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 3/156 (1%)
Query: 466 CMG--MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI 523
C+G + FK+ LG G VY AE I T A+K++D + + R Q E +I
Sbjct: 5 CIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L HP + L+ +F + LV+E C G+++ K + FSE AR ++ +++
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRY-LKNRVKPFSENEARHFMHQIIT 123
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH G+++RDL N+L+ + +I ++DF L+
Sbjct: 124 GMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLA 159
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 706 SFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLR 765
+ GT Y++PEI HG D W+ G + LL GR PF TL+ VV
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE 230
Query: 766 FPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
P + +S A+DLI LL + P +RL + + HPF
Sbjct: 231 MPSF--LSIEAKDLIHQLLRRNPADRL----SLSSVLDHPFM 266
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G+ V ++ Q F EQ Y+ E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGE--VYKELQKLSKFDEQRTATYITELANALSY 128
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 161 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 221 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 264
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G+ V ++ Q F EQ Y+ E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGE--VYKELQKLSKFDEQRTATYITELANALSY 128
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 161 VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 221 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 264
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 128
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 129 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 161
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 161 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 221 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 264
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 125
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 158
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 158 VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 217
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 218 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 261
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 124
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RD+KPEN+L+ G + ++DF S
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWS 156
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
+R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET +
Sbjct: 162 SRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR 221
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 222 VEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 260
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 156 VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 216 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 259
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 159 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 219 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 262
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKKVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + +T
Sbjct: 156 VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTY 215
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 216 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 259
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 156 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 216 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 259
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 124
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R ++ GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 157 VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 217 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 260
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 124
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 125 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 157
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 217 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 260
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 80/162 (49%), Gaps = 8/162 (4%)
Query: 465 GCMG------MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQ 518
G MG + F++ + LG G G VYLA + + ALKV+ L + +
Sbjct: 1 GAMGSKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 60
Query: 519 TEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYV 578
E EI L HP + L+ +F L++EY P G V R+ Q F EQ Y+
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYI 118
Query: 579 AEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
E+ AL Y H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 160
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 160 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 219
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 220 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F + + LG G G VYLA + + ALKV+ L + + E EI L HP
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSL 620
V++RD+KPEN+L+ +G + ++DF S+
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSV 160
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R ++ GT +YL PE+I+G H VD W+ G+ +E L G PF+ ET
Sbjct: 160 VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETY 219
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEG 809
+ FP + V+ ARDLI LL RL AE+ +HP+ +
Sbjct: 220 RRISRVEFTFPDF--VTEGARDLISRLLKHNASQRL----TLAEVLEHPWIKA 266
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 156 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 216 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 259
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F + + LG G G VYLA + + ALKV+ L + + E EI L HP
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSL 620
V++RD+KPEN+L+ +G + ++DF S+
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSV 160
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G PF+ ET
Sbjct: 160 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETY 219
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEG 809
+ FP + V+ ARDLI LL RL AE+ +HP+ +
Sbjct: 220 RRISRVEFTFPDF--VTEGARDLISRLLKHNASQRL----TLAEVLEHPWIKA 266
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 156 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 216 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 259
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 159 VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 219 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 262
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 156 VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 216 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 156 VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 216 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 122
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 123 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 155
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 155 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 214
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 215 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 258
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 159 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 219 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 262
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 123
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 124 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 156
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 156 VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 216 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 159
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 159 VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 219 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 125
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + +++F S+
Sbjct: 126 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSV 158
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 158 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 217
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 218 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 261
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + + ALKV+ L + + E EI L
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 126
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + +++F S+
Sbjct: 127 CHSKRVIHRDIKPENLLLGSAGELKIANFGWSV 159
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 159 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 219 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML 527
+ F++ + LG G G VYLA + ALKV+ L + + E EI L
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + L+ +F L++EY P G V R+ Q F EQ Y+ E+ AL Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGT--VYRELQKLSKFDEQRTATYITELANALSY 120
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLSL 620
H V++RD+KPEN+L+ G + ++DF S+
Sbjct: 121 CHSKRVIHRDIKPENLLLGSAGELKIADFGWSV 153
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V +R + GT +YL PE+I+G H VD W+ G+ +E L G+ PF+ + ET
Sbjct: 153 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 212
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ FP + V+ ARDLI LL P R E+ +HP+
Sbjct: 213 KRISRVEFTFPDF--VTEGARDLISRLLKHNPSQR----PMLREVLEHPW 256
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F+ + LG G V LAE T LFA+K + L G++ + E +++ + H
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKE--SSIENEIAVLRKIKHEN 81
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + + LVM+ GG+L + F++E+ A + +VL A+ YLH +
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGEL--FDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 592 GVVYRDLKPENILVR---EDGHIMLSDFDLS 619
G+V+RDLKPEN+L E+ IM+SDF LS
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLS 170
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+E G ++ GT Y+APE++ + + +VD W+ G+ + LL G PF + +
Sbjct: 172 MEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLF 231
Query: 757 SNVVSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEG 809
++ F P + +S A+D IR L+ K+P+ R + A +HP+ G
Sbjct: 232 EQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAA----RHPWIAG 282
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F + + LG G G VYLA + ALKV+ L + + E EI L HP
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ ++ +F K L++E+ P G+L+ QK F EQ + ++ E+ AL Y H
Sbjct: 77 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHER 134
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSL 620
V++RD+KPEN+L+ G + ++DF S+
Sbjct: 135 KVIHRDIKPENLLMGYKGELKIADFGWSV 163
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V R GT +YL PE+I+G+ H VD W G+ +E L G PF + ET
Sbjct: 163 VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH 222
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIR 816
+V+ L+FP P +S ++DLI LL P RL +KG E HP+ + A R
Sbjct: 223 RRIVNVDLKFP--PFLSDGSKDLISKLLRYHPPQRL-PLKGVME---HPWVK----ANSR 272
Query: 817 CAVPP 821
+PP
Sbjct: 273 RVLPP 277
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F + + LG G G VYLA + ALKV+ L + + E EI L HP
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ ++ +F K L++E+ P G+L+ QK F EQ + ++ E+ AL Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHER 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSL 620
V++RD+KPEN+L+ G + ++DF S+
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V R GT +YL PE+I+G+ H VD W G+ +E L G PF + ET
Sbjct: 162 VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH 221
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIR 816
+V+ L+FP P +S ++DLI LL P RL +KG E HP+ + A R
Sbjct: 222 RRIVNVDLKFP--PFLSDGSKDLISKLLRYHPPQRL-PLKGVME---HPWVK----ANSR 271
Query: 817 CAVPP 821
+PP
Sbjct: 272 RVLPP 276
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F + + LG G G VYLA + ALKV+ L + + E EI L HP
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ ++ +F K L++E+ P G+L+ QK F EQ + ++ E+ AL Y H
Sbjct: 76 ILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHER 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSL 620
V++RD+KPEN+L+ G + ++DF S+
Sbjct: 134 KVIHRDIKPENLLMGYKGELKIADFGWSV 162
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V R GT +YL PE+I+G+ H VD W G+ +E L G PF + ET
Sbjct: 162 VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETH 221
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIR 816
+V+ L+FP P +S ++DLI LL P RL +KG E HP+ + A R
Sbjct: 222 RRIVNVDLKFP--PFLSDGSKDLISKLLRYHPPQRL-PLKGVME---HPWVK----ANSR 271
Query: 817 CAVPP 821
+PP
Sbjct: 272 RVLPP 276
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 80/149 (53%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
+++L K +G G+ V LA I T A+K++D L + + E IM++L+HP
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHP 66
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ LF TEK LVMEY GG+ V + E+ AR +++ A++Y H
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLK EN+L+ D +I ++DF S
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFS 153
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + ++F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G E V
Sbjct: 159 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 218
Query: 760 VSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ R P Y +S +L++ L+ P R
Sbjct: 219 LRGKYRIPFY--MSTDCENLLKKFLILNPSKR 248
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL--VGRKKMPRAQTEREIMQMLD 528
+++L K +G G+ V LA + T A+K++D L +K+ R E IM++L+
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR---EVRIMKILN 72
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
HP + LF TEK LVMEY GG+ V E+ AR +++ A++Y
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSAVQYC 130
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 131 HQKYIVHRDLKAENLLLDGDMNIKIADFGFS 161
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSN 758
G + ++F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G E
Sbjct: 166 VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 225
Query: 759 VVSQSLRFPGY 769
V+ R P Y
Sbjct: 226 VLRGKYRIPFY 236
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 13/163 (7%)
Query: 465 GCMG------MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL--VGRKKMPR 516
G MG + +++L K +G G+ V LA I T A+K++D L +K+ R
Sbjct: 1 GAMGSDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR 60
Query: 517 AQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
E IM++L+HP + LF TEK L+MEY GG+ V E+ AR
Sbjct: 61 ---EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGE--VFDYLVAHGRMKEKEARS 115
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++ A++Y H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 116 KFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSN 758
G + ++F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G E
Sbjct: 163 VGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 222
Query: 759 VVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
V+ R P Y +S +L++ LV P R
Sbjct: 223 VLRGKYRIPFY--MSTDCENLLKRFLVLNPIKR 253
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
+++L K +G G+ V LA I T A+K++D L + + E IM++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHP 73
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ LF TEK LVMEY GG+ V E+ AR +++ A++Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLK EN+L+ D +I ++DF S
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + ++F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G E V
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 760 VSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ R P Y +S +L++ L+ P R
Sbjct: 226 LRGKYRIPFY--MSTDCENLLKKFLILNPSKR 255
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
+++L K +G G+ V LA I T A+K++D L + + E IM++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHP 73
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ LF TEK LVMEY GG+ V E+ AR +++ A++Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLK EN+L+ D +I ++DF S
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + ++F G Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G E V
Sbjct: 166 GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 760 VSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ R P Y +S +L++ L+ P R
Sbjct: 226 LRGKYRIPFY--MSTDCENLLKKFLILNPSKR 255
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
+++L K +G G+ V LA I T A+K++D L + + E IM++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIMKVLNHP 73
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ LF TEK LVMEY GG+ V E+ AR +++ A++Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLK EN+L+ D +I ++DF S
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + ++F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G E V
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 760 VSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ R P Y +S +L++ L+ P R
Sbjct: 226 LRGKYRIPFY--MSTDCENLLKKFLILNPSKR 255
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 81/151 (53%), Gaps = 7/151 (4%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL--VGRKKMPRAQTEREIMQMLD 528
+++L K +G G+ V LA I T A+K++D L +K+ R E IM++L+
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR---EVRIMKILN 72
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
HP + LF TEK L+MEY GG+ V E+ AR +++ A++Y
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGE--VFDYLVAHGRMKEKEARSKFRQIVSAVQYC 130
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H +V+RDLK EN+L+ D +I ++DF S
Sbjct: 131 HQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSN 758
G + ++F G Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G E
Sbjct: 166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 225
Query: 759 VVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
V+ R P Y +S +L++ LV P R
Sbjct: 226 VLRGKYRIPFY--MSTDCENLLKRFLVLNPIKR 256
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+ LG G V LAE T L A+K + + L G++ + E ++ + HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVLHKIKHPN 77
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + + L+M+ GG+L + F++E+ A + +VL A++YLH L
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 592 GVVYRDLKPENIL---VREDGHIMLSDFDLS 619
G+V+RDLKPEN+L + ED IM+SDF LS
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+E G+ ++ GT Y+APE++ + + +VD W+ G+ + LL G PF + +
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
Query: 757 SNVVSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEG 809
++ F P + +S A+D IR L+ K+P+ R + QHP+ G
Sbjct: 228 EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+ LG G V LAE T L A+K + + L G++ + E ++ + HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKE--GSMENEIAVLHKIKHPN 77
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + + L+M+ GG+L + F++E+ A + +VL A++YLH L
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 592 GVVYRDLKPENIL---VREDGHIMLSDFDLS 619
G+V+RDLKPEN+L + ED IM+SDF LS
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+E G+ ++ GT Y+APE++ + + +VD W+ G+ + LL G PF + +
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
Query: 757 SNVVSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEG 809
++ F P + +S A+D IR L+ K+P+ R + QHP+ G
Sbjct: 228 EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+++ L +G G G V +A GT A K + F+ + + R + E EIM+ LDH
Sbjct: 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDH 65
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L+ F LVME C GG+L + R F E A + +VL A+ Y H
Sbjct: 66 PNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCH 123
Query: 590 MLGVVYRDLKPENILVRE---DGHIMLSDFDLSLR 621
L V +RDLKPEN L D + L DF L+ R
Sbjct: 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
I LAA+ P G + VGT Y++P++++G +G D W+ G+ ++ L
Sbjct: 151 IDFGLAARFKP---------GKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVL 200
Query: 741 LYGRTPFKGSGNDETLSNVVSQSLRFP--GYPVVSFHARDLIRGLLVKEPDNRLGAVKGA 798
L G PF + E + + + FP + VS A LIR LL K P R+ +++
Sbjct: 201 LCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL 260
Query: 799 AEIKQHPFFE 808
+H +FE
Sbjct: 261 ----EHEWFE 266
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 76/155 (49%), Gaps = 8/155 (5%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+++ L +G G G V +A GT A K + F+ + + R + E EIM+ LDH
Sbjct: 26 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDH 82
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L+ F LVME C GG+L + R F E A + +VL A+ Y H
Sbjct: 83 PNIIRLYETFEDNTDIYLVMELCTGGEL--FERVVHKRVFRESDAARIMKDVLSAVAYCH 140
Query: 590 MLGVVYRDLKPENILVRE---DGHIMLSDFDLSLR 621
L V +RDLKPEN L D + L DF L+ R
Sbjct: 141 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
I LAA+ P G + VGT Y++P++++G +G D W+ G+ ++ L
Sbjct: 168 IDFGLAARFKP---------GKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVL 217
Query: 741 LYGRTPFKGSGNDETLSNVVSQSLRFP--GYPVVSFHARDLIRGLLVKEPDNRLGAVKGA 798
L G PF + E + + + FP + VS A LIR LL K P R+ +++
Sbjct: 218 LCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL 277
Query: 799 AEIKQHPFFE 808
+H +FE
Sbjct: 278 ----EHEWFE 283
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
+++L K +G G+ V LA I T A++++D L + + E IM++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLNHP 73
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ LF TEK LVMEY GG+ V E+ AR +++ A++Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLK EN+L+ D +I ++DF S
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + + F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G E V
Sbjct: 166 GNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 760 VSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ R P Y +S +L++ L+ P R
Sbjct: 226 LRGKYRIPFY--MSTDCENLLKKFLILNPSKR 255
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+ LG G V LAE T L A+K + L G++ + E ++ + HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEG--SMENEIAVLHKIKHPN 77
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + + L+M+ GG+L + F++E+ A + +VL A++YLH L
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 592 GVVYRDLKPENIL---VREDGHIMLSDFDLS 619
G+V+RDLKPEN+L + ED IM+SDF LS
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+E G+ ++ GT Y+APE++ + + +VD W+ G+ + LL G PF + +
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
Query: 757 SNVVSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEG 809
++ F P + +S A+D IR L+ K+P+ R + QHP+ G
Sbjct: 228 EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 7/151 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+ LG G V LAE T L A+K + + L G++ + E ++ + HP
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEG--SMENEIAVLHKIKHPN 77
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + + L+M+ GG+L + F++E+ A + +VL A++YLH L
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 135
Query: 592 GVVYRDLKPENIL---VREDGHIMLSDFDLS 619
G+V+RDLKPEN+L + ED IM+SDF LS
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLS 166
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 6/115 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+E G+ ++ GT Y+APE++ + + +VD W+ G+ + LL G PF + +
Sbjct: 168 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLF 227
Query: 757 SNVVSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEG 809
++ F P + +S A+D IR L+ K+P+ R + QHP+ G
Sbjct: 228 EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL----QHPWIAG 278
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
++++ K LG G G V LA T ALK+++ L R + E +++L HP
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ L+ ++ +V+EY + Q+ SEQ AR + +++ A+EY H
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHR 130
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLS 159
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 709 GTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
G+ Y APE+I G+ + G VD W+ G+ L+ +L R PF N+ + P
Sbjct: 173 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 232
Query: 768 GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+ +S A LI+ +L+ P NR+ EI Q +F+
Sbjct: 233 KF--LSPGAAGLIKRMLIVNPLNRI----SIHEIMQDDWFK 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 79/149 (53%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
+++L K +G G+ V LA I T A++++D L + + E IM++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQL-NSSSLQKLFREVRIMKVLNHP 73
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ LF TEK LVMEY GG+ V E+ AR +++ A++Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGE--VFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLK EN+L+ D +I ++DF S
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS 160
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + ++F G+ Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G E V
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 760 VSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ R P Y +S +L++ L+ P R
Sbjct: 226 LRGKYRIPFY--MSTDCENLLKKFLILNPSKR 255
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
++++ K LG G G V LA T ALK+++ L R + E +++L HP
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ L+ ++ +V+EY + Q+ SEQ AR + +++ A+EY H
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHR 131
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLS 160
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 709 GTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
G+ Y APE+I G+ + G VD W+ G+ L+ +L R PF N+ + P
Sbjct: 174 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 233
Query: 768 GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+ +S A LI+ +L+ P NR+ EI Q +F+
Sbjct: 234 KF--LSPGAAGLIKRMLIVNPLNRI----SIHEIMQDDWFK 268
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+++ +LG G G VY A+ TS L A KV+D +++ E +I+ DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPN 95
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGG--DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+ L F E +++E+C GG D +L ++P +E + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLSLR 621
+++RDLK NIL DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 703 RSNSFVGTHEYLAPEII-----KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
R +SF+GT ++APE++ K + D W+ GI L E+ P L
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 758 NVVSQ---SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ +L P +F +D ++ L K D R +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNF--KDFLKKCLEKNVDARW----TTSQLLQHPF 296
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+++ +LG G G VY A+ TS L A KV+D +++ E +I+ DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPN 95
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGG--DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+ L F E +++E+C GG D +L ++P +E + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLSLR 621
+++RDLK NIL DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 14/115 (12%)
Query: 700 TGARSNSFVGTHEYLAPEII-----KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDE 754
T R +SF+GT ++APE++ K + D W+ GI L E+ P
Sbjct: 188 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR 247
Query: 755 TLSNVVSQ---SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
L + +L P +F +D ++ L K D R +++ QHPF
Sbjct: 248 VLLKIAKSEPPTLAQPSRWSSNF--KDFLKKCLEKNVDARW----TTSQLLQHPF 296
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
++++ K LG G G V LA T ALK+++ L R + E +++L HP
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ L+ ++ +V+EY + Q+ SEQ AR + +++ A+EY H
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHR 121
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLS 150
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 709 GTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
G+ Y APE+I G+ + G VD W+ G+ L+ +L R PF N+ + P
Sbjct: 164 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 223
Query: 768 GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPEL 823
+ +S A LI+ +L+ P NR+ EI Q +F+ L +PP+L
Sbjct: 224 KF--LSPGAAGLIKRMLIVNPLNRI----SIHEIMQDDWFK---VDLPEYLLPPDL 270
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+++ +LG G G VY A+ TS L A KV+D +++ E +I+ DHP
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPN 95
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGG--DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+ L F E +++E+C GG D +L ++P +E + + L AL YLH
Sbjct: 96 IVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLH 152
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLSLR 621
+++RDLK NIL DG I L+DF +S +
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 14/112 (12%)
Query: 703 RSNSFVGTHEYLAPEII-----KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
R + F+GT ++APE++ K + D W+ GI L E+ P L
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 758 NVVSQ---SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ +L P +F +D ++ L K D R +++ QHPF
Sbjct: 251 KIAKSEPPTLAQPSRWSSNF--KDFLKKCLEKNVDARW----TTSQLLQHPF 296
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
++++ K LG G G V LA T ALK+++ L R + E +++L HP
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ L+ ++ +V+EY + Q+ SEQ AR + +++ A+EY H
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDK---MSEQEARRFFQQIISAVEYCHR 125
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLKPEN+L+ E ++ ++DF LS
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLS 154
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 709 GTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
G+ Y APE+I G+ + G VD W+ G+ L+ +L R PF N+ + P
Sbjct: 168 GSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP 227
Query: 768 GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPEL 823
+ +S A LI+ +L+ P NR+ EI Q +F+ L +PP+L
Sbjct: 228 KF--LSPGAAGLIKRMLIVNPLNRI----SIHEIMQDDWFK---VDLPEYLLPPDL 274
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
V R + GT +YL PE+I+G H VD W G+ +ELL G PF+ + ++ET
Sbjct: 171 VHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETY 230
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+V L+FP V A+DLI LL P RL A++ HP+
Sbjct: 231 RRIVKVDLKFPA--SVPTGAQDLISKLLRHNPSERL----PLAQVSAHPW 274
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 79/149 (53%), Gaps = 2/149 (1%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F++ + LG G G VYLA + + ALKV+ + + + E EI L HP
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPN 84
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L+ +F + L++EY P G+L+ ++ Q S F EQ + E+ AL Y H
Sbjct: 85 ILRLYNYFYDRRRIYLILEYAPRGELY--KELQKSCTFDEQRTATIMEELADALMYCHGK 142
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSL 620
V++RD+KPEN+L+ G + ++DF S+
Sbjct: 143 KVIHRDIKPENLLLGLKGELKIADFGWSV 171
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 481 GDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFT 540
GD G VY A+ TS L A KV+D +++ E +I+ DHP + L F
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTK---SEEELEDYMVEIDILASCDHPNIVKLLDAFY 77
Query: 541 TEKFSCLVMEYCPGG--DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
E +++E+C GG D +L ++P +E + + L AL YLH +++RDL
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERP---LTESQIQVVCKQTLDALNYLHDNKIIHRDL 134
Query: 599 KPENILVREDGHIMLSDFDLSLR 621
K NIL DG I L+DF +S +
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAK 157
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Query: 703 RSNSFVGTHEYLAPEII-----KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
R +SF+GT ++APE++ K + D W+ GI L E+ P L
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 224
Query: 758 NVVSQ---SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ +L P +F +D ++ L K D R +++ QHPF
Sbjct: 225 KIAKSEPPTLAQPSRWSSNF--KDFLKKCLEKNVDARW----TTSQLLQHPF 270
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 28/179 (15%)
Query: 466 CMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLV---------------- 509
C+ + + L ++G G G V LA + +A+KV+ L+
Sbjct: 9 CVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRP 68
Query: 510 --GRKKMPRAQTER-----EIMQMLDHPFLPTLFAHFT--TEKFSCLVMEYCPGGDLHVL 560
G PR E+ I++ LDHP + L E +V E G + +
Sbjct: 69 APGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV 128
Query: 561 RQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+P SE ARFY +++ +EYLH +++RD+KP N+LV EDGHI ++DF +S
Sbjct: 129 PTLKP---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 15/106 (14%)
Query: 708 VGTHEYLAPEII---KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL----SNVV 760
VGT ++APE + + G ++D W G+ L+ ++G+ PF DE + S +
Sbjct: 198 VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFM----DERIMCLHSKIK 253
Query: 761 SQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
SQ+L FP P ++ +DLI +L K P++R+ EIK HP+
Sbjct: 254 SQALEFPDQPDIAEDLKDLITRMLDKNPESRI----VVPEIKLHPW 295
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+ + + LG G G V LA T ALK + L R + E +++L HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+ L+ TT +V+EY GG+L +++ +K+ +E R + +++ A+EY H
Sbjct: 71 IIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKR----MTEDEGRRFFQQIICAIEYCH 125
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLKPEN+L+ ++ ++ ++DF LS
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLS 155
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 22/149 (14%)
Query: 709 GTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ--SLR 765
G+ Y APE+I G+ + G VD W+ GI L+ +L GR PF +DE + N+ + S
Sbjct: 169 GSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF----DDEFIPNLFKKVNSCV 224
Query: 766 FPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPR 825
+ +S A+ LIR ++V +P R+ EI++ P+F N L P+ R
Sbjct: 225 YVMPDFLSPGAQSLIRRMIVADPMQRI----TIQEIRRDPWF---NVNL------PDYLR 271
Query: 826 SCDAVIGS--QKKESTKCEESKGAADEHV 852
+ V GS + +K E+ G +++++
Sbjct: 272 PMEEVQGSYADSRIVSKLGEAMGFSEDYI 300
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVG--RKKMP--RAQTEREIMQM 526
+ + K LG G G V LA T A+K++ F +G R+ P +TE EI++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L+HP + + F E + +V+E GG+L + ++ E + Y ++LLA++
Sbjct: 72 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 587 YLHMLGVVYRDLKPENILV---REDGHIMLSDF 616
YLH G+++RDLKPEN+L+ ED I ++DF
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 706 SFVGTHEYLAPEI---IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSN-VVS 761
+ GT YLAPE+ + G+ +VD W+ G+ LF L G PF +L + + S
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 762 QSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
F + VS A DL++ LLV +P R E +HP+ +
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 279
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
KKLG G G V L + T A+K++ + E +++ LDHP + L
Sbjct: 27 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 86
Query: 536 FAHFTTEKFSCLVMEYCPGGDLH---VLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLG 592
+ F ++ LVME GG+L +LRQK FSE A + +VL YLH
Sbjct: 87 YEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYLHKHN 141
Query: 593 VVYRDLKPENILVR---EDGHIMLSDFDLS 619
+V+RDLKPEN+L+ D I + DF LS
Sbjct: 142 IVHRDLKPENLLLESKSRDALIKIVDFGLS 171
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + +GT Y+APE+++ + + D W+ G+ L+ LL G PF G + E L V
Sbjct: 176 VGGKMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
Query: 760 VSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
F P + VS A+ L++ +L EP R+ A E HP+
Sbjct: 235 EKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRI----SAEEALNHPW 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVG--RKKMP--RAQTEREIMQM 526
+ + K LG G G V LA T A+K++ F +G R+ P +TE EI++
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L+HP + + F E + +V+E GG+L + ++ E + Y ++LLA++
Sbjct: 71 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 587 YLHMLGVVYRDLKPENILV---REDGHIMLSDF 616
YLH G+++RDLKPEN+L+ ED I ++DF
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 160
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 706 SFVGTHEYLAPEI---IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSN-VVS 761
+ GT YLAPE+ + G+ +VD W+ G+ LF L G PF +L + + S
Sbjct: 174 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 233
Query: 762 QSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
F + VS A DL++ LLV +P R E +HP+ +
Sbjct: 234 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVG--RKKMP--RAQTEREIMQM 526
+ + K LG G G V LA T A+K++ F +G R+ P +TE EI++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L+HP + + F E + +V+E GG+L + ++ E + Y ++LLA++
Sbjct: 72 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 587 YLHMLGVVYRDLKPENILV---REDGHIMLSDF 616
YLH G+++RDLKPEN+L+ ED I ++DF
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 706 SFVGTHEYLAPEI---IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSN-VVS 761
+ GT YLAPE+ + G+ +VD W+ G+ LF L G PF +L + + S
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 762 QSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
F + VS A DL++ LLV +P R E +HP+ +
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 279
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
KKLG G G V L + T A+K++ + E +++ LDHP + L
Sbjct: 10 KKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKL 69
Query: 536 FAHFTTEKFSCLVMEYCPGGDLH---VLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLG 592
+ F ++ LVME GG+L +LRQK FSE A + +VL YLH
Sbjct: 70 YEFFEDKRNYYLVMEVYRGGELFDEIILRQK-----FSEVDAAVIMKQVLSGTTYLHKHN 124
Query: 593 VVYRDLKPENILVR---EDGHIMLSDFDLS 619
+V+RDLKPEN+L+ D I + DF LS
Sbjct: 125 IVHRDLKPENLLLESKSRDALIKIVDFGLS 154
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + +GT Y+APE+++ + + D W+ G+ L+ LL G PF G + E L V
Sbjct: 159 VGGKMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
Query: 760 VSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
F P + VS A+ L++ +L EP R+ A E HP+
Sbjct: 218 EKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRI----SAEEALNHPW 262
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVG--RKKMP--RAQTEREIMQM 526
+ + K LG G G V LA T A+K++ F +G R+ P +TE EI++
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L+HP + + F E + +V+E GG+L + ++ E + Y ++LLA++
Sbjct: 72 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 587 YLHMLGVVYRDLKPENILV---REDGHIMLSDF 616
YLH G+++RDLKPEN+L+ ED I ++DF
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 161
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 706 SFVGTHEYLAPEI---IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSN-VVS 761
+ GT YLAPE+ + G+ +VD W+ G+ LF L G PF +L + + S
Sbjct: 175 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 234
Query: 762 QSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
F + VS A DL++ LLV +P R E +HP+ +
Sbjct: 235 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVG--RKKMP--RAQTEREIMQM 526
+ + K LG G G V LA T A+K++ F +G R+ P +TE EI++
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L+HP + + F E + +V+E GG+L + ++ E + Y ++LLA++
Sbjct: 78 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 587 YLHMLGVVYRDLKPENILV---REDGHIMLSDF 616
YLH G+++RDLKPEN+L+ ED I ++DF
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 167
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 706 SFVGTHEYLAPEI---IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSN-VVS 761
+ GT YLAPE+ + G+ +VD W+ G+ LF L G PF +L + + S
Sbjct: 181 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 240
Query: 762 QSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
F + VS A DL++ LLV +P R E +HP+ +
Sbjct: 241 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 285
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 3/149 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
+++L K +G G+ V LA I T A+K++D L + + E I ++L+HP
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQL-NSSSLQKLFREVRIXKVLNHP 73
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ LF TEK LV EY GG+ V E+ AR +++ A++Y H
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGE--VFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLK EN+L+ D +I ++DF S
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFS 160
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + ++F G Y APE+ +G+ + G VD W+ G+ L+ L+ G PF G E V
Sbjct: 166 GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV 225
Query: 760 VSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ R P Y S +L++ L+ P R
Sbjct: 226 LRGKYRIPFY--XSTDCENLLKKFLILNPSKR 255
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVG--RKKMP--RAQTEREIMQM 526
+ + K LG G G V LA T A++++ F +G R+ P +TE EI++
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L+HP + + F E + +V+E GG+L + ++ E + Y ++LLA++
Sbjct: 211 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 587 YLHMLGVVYRDLKPENILV---REDGHIMLSDF 616
YLH G+++RDLKPEN+L+ ED I ++DF
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 300
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 706 SFVGTHEYLAPEI---IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSN-VVS 761
+ GT YLAPE+ + G+ +VD W+ G+ LF L G PF +L + + S
Sbjct: 314 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 373
Query: 762 QSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
F + VS A DL++ LLV +P R E +HP+ +
Sbjct: 374 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 418
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVG--RKKMP--RAQTEREIMQM 526
+ + K LG G G V LA T A++++ F +G R+ P +TE EI++
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L+HP + + F E + +V+E GG+L + ++ E + Y ++LLA++
Sbjct: 197 LNHPCIIKIKNFFDAEDYY-IVLELMEGGEL--FDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 587 YLHMLGVVYRDLKPENILV---REDGHIMLSDF 616
YLH G+++RDLKPEN+L+ ED I ++DF
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDF 286
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 10/109 (9%)
Query: 706 SFVGTHEYLAPEI---IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSN-VVS 761
+ GT YLAPE+ + G+ +VD W+ G+ LF L G PF +L + + S
Sbjct: 300 TLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITS 359
Query: 762 QSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
F + VS A DL++ LLV +P R E +HP+ +
Sbjct: 360 GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARF----TTEEALRHPWLQ 404
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 79/155 (50%), Gaps = 11/155 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI--MQMLDH 529
F +KLG G G V+L E + +K ++ D R ++P Q E EI ++ LDH
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKD----RSQVPMEQIEAEIEVLKSLDH 79
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
P + +F F +VME C GG+L ++ + + SE + +++ AL Y
Sbjct: 80 PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 588 LHMLGVVYRDLKPENILVREDG-H--IMLSDFDLS 619
H VV++DLKPENIL ++ H I + DF L+
Sbjct: 140 FHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA 174
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
S + GT Y+APE+ K + D W+ G+ ++ LL G PF G+ +E +
Sbjct: 183 STNAAGTALYMAPEVFKRDV-TFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE 241
Query: 764 LRFPGYPV----VSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
P Y V ++ A DL++ +L K+P+ R AA++ H +F+
Sbjct: 242 ---PNYAVECRPLTPQAVDLLKQMLTKDPERR----PSAAQVLHHEWFK 283
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+++ +LG G G VY A+ T L A KV++ +++ E EI+ DHP+
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPY 77
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + + +++E+CPGG + + + R +E + ++L AL +LH
Sbjct: 78 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSLR 621
+++RDLK N+L+ +G I L+DF +S +
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 166
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 14/120 (11%)
Query: 700 TGARSNSFVGTHEYLAPEII-----KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDE 754
T + +SF+GT ++APE++ K + D W+ GI L E+ P
Sbjct: 170 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 229
Query: 755 TLSNVVSQ---SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLN 811
L + +L P V F RD ++ L K P+ R AA++ +HPF +
Sbjct: 230 VLLKIAKSDPPTLLTPSKWSVEF--RDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 283
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+++ +LG G G VY A+ T L A KV++ +++ E EI+ DHP+
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPY 69
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + + +++E+CPGG + + + R +E + ++L AL +LH
Sbjct: 70 IVKLLGAYYHDGKLWIMIEFCPGGAVDAI-MLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSLR 621
+++RDLK N+L+ +G I L+DF +S +
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAK 158
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 14/120 (11%)
Query: 700 TGARSNSFVGTHEYLAPEII-----KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDE 754
T + +SF+GT ++APE++ K + D W+ GI L E+ P
Sbjct: 162 TLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR 221
Query: 755 TLSNVVSQ---SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLN 811
L + +L P V F RD ++ L K P+ R AA++ +HPF +
Sbjct: 222 VLLKIAKSDPPTLLTPSKWSVEF--RDFLKIALDKNPETR----PSAAQLLEHPFVSSIT 275
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEIXIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEIXIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 59
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEIXIN 59
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 16/173 (9%)
Query: 460 VQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMD-NDFLVGRKKMPRAQ 518
V+K+ G +G +FK+ +KLG G G V L + A+KV+ + F GR
Sbjct: 27 VRKKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKN 85
Query: 519 TER---------EIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFF 569
E+ +++ LDHP + LF F +K+ LV E+ GG+L Q F
Sbjct: 86 IEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL--FEQIINRHKF 143
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDG---HIMLSDFDLS 619
E A + ++L + YLH +V+RD+KPENIL+ +I + DF LS
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLS 196
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS---L 764
+GT Y+APE++K + + D W+ G+ ++ LL G PF G ND+ + V +
Sbjct: 209 LGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPF-GGQNDQDIIKKVEKGKYYF 266
Query: 765 RFPGYPVVSFHARDLIRGLLVKEPDNRLGA 794
F + +S A++LI+ +L + + R A
Sbjct: 267 DFNDWKNISDEAKELIKLMLTYDYNKRCTA 296
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+N+
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ S F + S A+D IR LLVKE RL E +HP+
Sbjct: 232 AVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL----TIQEALRHPW 275
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 468 GMRHFKLHK---------KLGCGDIGTVYLAELIGTSCLFALK-VMDNDFLVGRKKMPRA 517
GM FK K +LG G V T +A K + R+ + R
Sbjct: 1 GMETFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCRE 60
Query: 518 QTERE--IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAA 574
+ ERE I++ + HP + TL + L++E GG+L L QK+ SE+ A
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEA 117
Query: 575 RFYVAEVLLALEYLHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
++ ++L + YLH + + DLKPENI++ + HI L DF L+
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 59
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 59
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 59
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L++E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 129
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+N+
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRL 792
S S F + S A+D IR LLVKE RL
Sbjct: 232 SVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVGRKKMPRAQTERE--IMQMLD 528
+ + ++LG G V T +A K + R+ + R + ERE I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALEY 587
H + TL + L++E GG+L L QK+ SE+ A ++ ++L + Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF-KGSGNDETLSNVVSQ 762
N GT Y+APE++K E H VD W+ GI L +L G P+ + S + + S+ +
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEK 223
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRL 792
+ + L+ +LV+ P R+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 78/151 (51%), Gaps = 10/151 (6%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F++ +LG G VY + GT +ALKV+ KK+ R TE ++ L HP
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVR--TEIGVLLRLSHPN 109
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L F T LV+E GG+L + ++SE+ A V ++L A+ YLH
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGEL--FDRIVEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 592 GVVYRDLKPENILVRE---DGHIMLSDFDLS 619
G+V+RDLKPEN+L D + ++DF LS
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 709 GTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL-SNVVSQSLRF- 766
GT Y APEI++G +G VD W+ GI + LL G PF D+ + +++ F
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFI 271
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEG 809
P + VS +A+DL+R L+V +P RL + QHP+ G
Sbjct: 272 SPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL----QHPWVTG 311
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 57
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 115
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 116 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 150
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF-KGSGNDETLSNVVSQ 762
N GT Y+APE++K E H VD W+ GI L +L G P+ + S + + S+ +
Sbjct: 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 222
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRL 792
+ + L+ +LV+ P R+
Sbjct: 223 KTYLNPWKKIDSAPLALLHKILVENPSARI 252
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF-KGSGNDETLSNVVSQ 762
N GT Y+APE++K E H VD W+ GI L +L G P+ + S + + S+ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 223
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRL 792
+ + L+ +LV+ P R+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+N+
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRL 792
S S F + S A+D IR LLVKE RL
Sbjct: 232 SVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVGRKKMPRAQTERE--IMQMLD 528
+ + ++LG G V T +A K + R+ + R + ERE I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALEY 587
H + TL + L++E GG+L L QK+ SE+ A ++ ++L + Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+N+
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
S S F + S A+D IR LLVKE RL E +HP+
Sbjct: 232 SVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL----TIQEALRHPW 275
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVGRKKMPRAQTERE--IMQMLD 528
+ + ++LG G V T +A K + R+ + R + ERE I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALEY 587
H + TL + L++E GG+L L QK+ SE+ A ++ ++L + Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF-KGSGNDETLSNVVSQ 762
N GT Y+APE++K E H VD W+ GI L +L G P+ + S + + S+ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 223
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRL 792
+ + L+ +LV+ P R+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 472 FKLHKKLGCGDIGTVYLAE--LIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+K + LG G G V L + + G C A+KV+ + + E ++++ LDH
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
P + L+ F + + LV E GG+L ++ +K+ FSE A + +VL + Y
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITY 164
Query: 588 LHMLGVVYRDLKPENILVR---EDGHIMLSDFDLS 619
+H +V+RDLKPEN+L+ +D +I + DF LS
Sbjct: 165 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 199
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF- 766
+GT Y+APE++ G + D W+ G+ L+ LL G PF G+ + L V F
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGA 794
P + VS A+DLIR +L P R+ A
Sbjct: 271 LPQWKKVSESAKDLIRKMLTYVPSMRISA 299
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 472 FKLHKKLGCGDIGTVYLAE--LIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+K + LG G G V L + + G C A+KV+ + + E ++++ LDH
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
P + L+ F + + LV E GG+L ++ +K+ FSE A + +VL + Y
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITY 165
Query: 588 LHMLGVVYRDLKPENILVR---EDGHIMLSDFDLS 619
+H +V+RDLKPEN+L+ +D +I + DF LS
Sbjct: 166 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 200
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF- 766
+GT Y+APE++ G + D W+ G+ L+ LL G PF G+ + L V F
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGA 794
P + VS A+DLIR +L P R+ A
Sbjct: 272 LPQWKKVSESAKDLIRKMLTYVPSMRISA 300
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L++E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 129
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+N+
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRL 792
+ S F + S A+D IR LLVKE RL
Sbjct: 232 AVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL 265
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVGRKKMPRAQTERE--IMQMLD 528
+ + ++LG G V T +A K + R+ + R + ERE I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALEY 587
H + TL + L++E GG+L L QK+ SE+ A ++ ++L + Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 59
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF-KGSGNDETLSNVVSQ 762
N GT Y+APE++K E H VD W+ GI L +L G P+ + S + + S+ +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 224
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRL 792
+ + L+ +LV+ P R+
Sbjct: 225 KTYLNPWKKIDSAPLALLHKILVENPSARI 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF-KGSGNDETLSNVVSQ 762
N GT Y+APE++K E H VD W+ GI L +L G P+ + S + + S+ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 223
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRL 792
+ + L+ +LV+ P R+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L++E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 129
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L++E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 129
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 2/159 (1%)
Query: 461 QKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTE 520
QK G + + H+ L LG G G V + + T A+K+++ + + + + E
Sbjct: 7 QKHDGRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRRE 66
Query: 521 REIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAE 580
+ +++ HP + L+ +T +VMEY GG+L K E+ +R +
Sbjct: 67 IQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQ 124
Query: 581 VLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+L ++Y H VV+RDLKPEN+L+ + ++DF LS
Sbjct: 125 ILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 163
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 13/104 (12%)
Query: 709 GTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
G+ Y APE+I G + G VD W+ G+ L+ LL G PF + P
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP 236
Query: 768 GY---PVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
Y V+S L++ +L +P R +K +I++H +F+
Sbjct: 237 QYLNPSVIS-----LLKHMLQVDPMKR-ATIK---DIREHEWFK 271
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 472 FKLHKKLGCGDIGTVYLAE--LIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+K + LG G G V L + + G C A+KV+ + + E ++++ LDH
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
P + L+ F + + LV E GG+L ++ +K+ FSE A + +VL + Y
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITY 141
Query: 588 LHMLGVVYRDLKPENILVR---EDGHIMLSDFDLS 619
H +V+RDLKPEN+L+ +D +I + DF LS
Sbjct: 142 XHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF- 766
+GT Y+APE++ G + D W+ G+ L+ LL G PF G+ + L V F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGA 794
P + VS A+DLIR L P R+ A
Sbjct: 248 LPQWKKVSESAKDLIRKXLTYVPSXRISA 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+N+
Sbjct: 172 GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANIT 231
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ S F + S A+D IR LLVKE RL E +HP+
Sbjct: 232 AVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL----TIQEALRHPW 275
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVGRKKMPRAQTERE--IMQMLD 528
+ + ++LG G V T +A K + R+ + R + ERE I++ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALEY 587
H + TL + L++E GG+L L QK+ SE+ A ++ ++L + Y
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQILDGVNY 130
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH + + DLKPENI++ + HI L DF L+
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 12 YYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L++E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 129
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 511 RKKMPRAQTERE--IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF 568
R+ + R ERE I++ + HP + TL + + L++E GG+L ++ S
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
+E+ A ++ ++L + YLH L + + DLKPENI++ + I + DF L+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 511 RKKMPRAQTERE--IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF 568
R+ + R ERE I++ + HP + TL + + L++E GG+L ++ S
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
+E+ A ++ ++L + YLH L + + DLKPENI++ + I + DF L+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 229
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 230 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 273
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L++E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 128
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 170 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 229
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 230 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 273
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 11 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 70
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L++E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 71 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 128
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 164
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 61/115 (53%), Gaps = 8/115 (6%)
Query: 511 RKKMPRAQTERE--IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF 568
R+ + R ERE I++ + HP + TL + + L++E GG+L ++ S
Sbjct: 53 RRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES-- 110
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
+E+ A ++ ++L + YLH L + + DLKPENI++ + I + DF L+
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L++E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 129
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 58
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 116
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 117 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 151
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF-KGSGNDETLSNVVSQ 762
N GT Y+APE++K E H VD W+ GI L +L G P+ + S + + S+ +
Sbjct: 164 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 223
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRL 792
+ + L+ +LV+ P R+
Sbjct: 224 KTYLNPWKKIDSAPLALLHKILVENPSARI 253
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Query: 462 KQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTER 521
K G + + H+ L LG G G V + E T A+K+++ + + + + E
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREI 62
Query: 522 EIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEV 581
+ +++ HP + L+ +T +VMEY GG+L K E AR ++
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQI 120
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L A++Y H VV+RDLKPEN+L+ + ++DF LS
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 709 GTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPF 747
G+ Y APE+I G + G VD W+ G+ L+ LL G PF
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L+ E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 72 QHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 129
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 472 FKLHKKLGCGDIGTVYLAE--LIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+K + LG G G V L + + G C A+KV+ + + E ++++ LDH
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
P + L+ F + + LV E GG+L ++ +K+ FSE A + +VL + Y
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITY 141
Query: 588 LHMLGVVYRDLKPENILVR---EDGHIMLSDFDLS 619
+H +V+RDLKPEN+L+ +D +I + DF LS
Sbjct: 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF- 766
+GT Y+APE++ G + D W+ G+ L+ LL G PF G+ + L V F
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGA 794
P + VS A+DLIR +L P R+ A
Sbjct: 248 LPQWKKVSESAKDLIRKMLTYVPSMRISA 276
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 2/158 (1%)
Query: 462 KQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTER 521
K G + + H+ L LG G G V + E T A+K+++ + + + + E
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREI 62
Query: 522 EIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEV 581
+ +++ HP + L+ +T +VMEY GG+L K E AR ++
Sbjct: 63 QNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR--VEEMEARRLFQQI 120
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L A++Y H VV+RDLKPEN+L+ + ++DF LS
Sbjct: 121 LSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLS 158
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 709 GTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPF 747
G+ Y APE+I G + G VD W+ G+ L+ LL G PF
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 13/155 (8%)
Query: 472 FKLHKKLGCGDIGTVYLAE--LIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+K + LG G G V L + + G C A+KV+ + + E ++++ LDH
Sbjct: 34 YKGQRVLGKGSFGEVILCKDKITGQEC--AVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
P + L+ F + + LV E GG+L ++ +K+ FSE A + +VL + Y
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR----FSEVDAARIIRQVLSGITY 147
Query: 588 LHMLGVVYRDLKPENILVR---EDGHIMLSDFDLS 619
+H +V+RDLKPEN+L+ +D +I + DF LS
Sbjct: 148 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS 182
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF- 766
+GT Y+APE++ G + D W+ G+ L+ LL G PF G+ + L V F
Sbjct: 195 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 253
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGA 794
P + VS A+DLIR +L P R+ A
Sbjct: 254 LPQWKKVSESAKDLIRKMLTYVPSMRISA 282
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 77/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 59
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF-KGSGNDETLSNVVSQ 762
N GT Y+APE++K E H VD W+ GI L +L G P+ + S + + S+ +
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK 224
Query: 763 SLRFPGYPVVSFHARDLIRGLLVKEPDNRL 792
+ + L+ +LV+ P R+
Sbjct: 225 KTYLNPWKKIDSAPLALLHKILVENPSARI 254
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 18/158 (11%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-----RAQTEREIM 524
+ F + LG G V+L + T LFALK + KK P + E ++
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCI--------KKSPAFRDSSLENEIAVL 60
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ + H + TL + + LVM+ GG+L + ++E+ A + +VL A
Sbjct: 61 KKIKHENIVTLEDIYESTTHYYLVMQLVSGGEL--FDRILERGVYTEKDASLVIQQVLSA 118
Query: 585 LEYLHMLGVVYRDLKPENILV---REDGHIMLSDFDLS 619
++YLH G+V+RDLKPEN+L E+ IM++DF LS
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLS 156
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 8/126 (6%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+E G S + GT Y+APE++ + + +VD W+ G+ + LL G PF +
Sbjct: 158 MEQNGIMSTA-CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLF 216
Query: 757 SNVVSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWAL 814
+ F P + +S A+D I LL K+P+ R K + HP+ +G N AL
Sbjct: 217 EKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS----HPWIDG-NTAL 271
Query: 815 IRCAVP 820
R P
Sbjct: 272 HRDIYP 277
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
KKLG G G V L T A+K++ V + E ++++LDHP + L
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKT-SVSTSSNSKLLEEVAVLKLLDHPNIMKL 101
Query: 536 FAHFTTEKFSCLVMEYCPGGDLH---VLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLG 592
+ F ++ LVME GG+L + R K F+E A + +VL + YLH
Sbjct: 102 YDFFEDKRNYYLVMECYKGGELFDEIIHRMK-----FNEVDAAVIIKQVLSGVTYLHKHN 156
Query: 593 VVYRDLKPENILV---REDGHIMLSDFDLS 619
+V+RDLKPEN+L+ +D I + DF LS
Sbjct: 157 IVHRDLKPENLLLESKEKDALIKIVDFGLS 186
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 16/138 (11%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF- 766
+GT Y+APE+++ + + D W+ G+ LF LL G PF G + E L V F
Sbjct: 199 LGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFD 257
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPP---E 822
P + VS A+DLI+ +L + R+ A + +HP W C+ E
Sbjct: 258 SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL----EHP------WIKEMCSKKESGIE 307
Query: 823 LPRSCDAVIGSQKKESTK 840
LP +A+ +K ++++
Sbjct: 308 LPSLANAIENMRKFQNSQ 325
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 6/108 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + F + S A+D IR LLVK+P R+ QHP+
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPW 274
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L++E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 129
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 18/155 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA-------QTEREIM 524
+ L + LG G G V LA T A+K++D M RA + E I
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD---------MKRAVDCPENIKKEICIN 59
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
ML+H + + H L +EYC GG+L + +P E A+ + +++
Sbjct: 60 AMLNHENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAG 117
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YLH +G+ +RD+KPEN+L+ E ++ +SDF L+
Sbjct: 118 VVYLHGIGITHRDIKPENLLLDERDNLKISDFGLA 152
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPF 747
N GT Y+APE++K E H VD W+ GI L +L G P+
Sbjct: 165 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 8/102 (7%)
Query: 709 GTHEYLAPEIIK--GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF 766
GT ++APE++ E +G D W+ G+ L LL G PF G + +T+S V+++ L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 767 --PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
P Y V+S ARDL+ LL + D R A++ QHP+
Sbjct: 296 ENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL----QHPW 333
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 42/192 (21%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL--VGRKKMPRAQTEREIMQML 527
+ + L +G G G V +A T + A+K+M+ + + + K + R +TE +M+ L
Sbjct: 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKL 85
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH------------------VLRQKQPSRFF 569
HP + L+ + E++ CLVME C GG L V Q P
Sbjct: 86 HHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPEC 145
Query: 570 SEQAAR-----------FYVAEVLL---------ALEYLHMLGVVYRDLKPENILVREDG 609
+E+A F E L+ AL YLH G+ +RD+KPEN L +
Sbjct: 146 NEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNK 205
Query: 610 --HIMLSDFDLS 619
I L DF LS
Sbjct: 206 SFEIKLVDFGLS 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 6/146 (4%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G G V+ E T A K++ G K + E +M LDH L L+
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTR---GMKDKEEVKNEISVMNQLDHANLIQLYD 153
Query: 538 HFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRD 597
F ++ LVMEY GG+L R S +E ++ ++ + ++H + +++ D
Sbjct: 154 AFESKNDIVLVMEYVDGGELFD-RIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 598 LKPENILV--REDGHIMLSDFDLSLR 621
LKPENIL R+ I + DF L+ R
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLARR 238
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 709 GTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS--QSLRF 766
GT E+LAPE++ + D W+ G+ + LL G +PF G + ETL+N+++ L
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 767 PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+ +S A++ I LL+KE R+ A+E +HP+
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRI----SASEALKHPWL 346
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT ++APEI+ E G D W+ G+ + LL G +PF G ETL+NV
Sbjct: 171 GNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVS 230
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+ + F + S A+D IR LLVK+P R+ QHP+ +
Sbjct: 231 AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL----QHPWIK 276
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFL-VGRKKMPRAQTERE--IMQML 527
++ ++LG G V T +A K + R+ + R ERE I++ +
Sbjct: 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEI 71
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL + + L++E GG+L ++ S +E+ A ++ ++L + Y
Sbjct: 72 QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEATEFLKQILNGVYY 129
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH L + + DLKPENI++ + I + DF L+
Sbjct: 130 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 2/156 (1%)
Query: 465 GCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
G + +F++ KK+G G VY A + ALK + L+ K E +++
Sbjct: 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQ--KQPSRFFSEQAARFYVAEVL 582
+ L+HP + +A F + +V+E GDL + + K+ R E+ Y ++
Sbjct: 87 KQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLC 146
Query: 583 LALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
ALE++H V++RD+KP N+ + G + L D L
Sbjct: 147 SALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL 182
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSG-NDETLSNVVSQ 762
++S VGT Y++PE I G+ D W+ G L+E+ ++PF G N +L + Q
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ 252
Query: 763 SLRFPGYPVVSFHARDLIRGLL 784
+P P+ S H + +R L+
Sbjct: 253 C-DYP--PLPSDHYSEELRQLV 271
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F+L + +G G G VY + T L A+KVMD + G ++ Q + + H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD---VTGDEEEEIKQEINMLKKYSHHRN 82
Query: 532 LPTLFAHFT------TEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
+ T + F + LVME+C G + L + E+ + E+L L
Sbjct: 83 IATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL 142
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+LH V++RD+K +N+L+ E+ + L DF +S
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSV-----DWWTFGIFLFELLYGRTPF 747
++ T R N+F+GT ++APE+I + + + D W+ GI E+ G P
Sbjct: 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L ++LG G V I T +A K+++ L R + + E I ++L HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 64
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + E F LV + GG+L ++SE A + ++L ++ + H+
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 592 GVVYRDLKPENILV---REDGHIMLSDFDLSL 620
G+V+RDLKPEN+L+ + + L+DF L++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 669 PRLLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSN--SFVGTHEYLAPEIIKGEGHGS 726
P L +A+KS+ LA L +E G + F GT YL+PE+++ + +G
Sbjct: 131 PENLLLASKSKGAAVKLADF-----GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 727 SVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFPG--YPVVSFHARDLIRGLL 784
VD W G+ L+ LL G PF + + + FP + V+ A+DLI +L
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 245
Query: 785 VKEPDNRLGAVKGAAEIKQHPFF 807
P R+ A+E +HP+
Sbjct: 246 TINPAKRI----TASEALKHPWI 264
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 12/151 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F + +KLG G G+VY A T + A+K + + + E IMQ D P
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-----SDLQEIIKEISIMQQCDSPH 85
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGG---DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
+ + + +VMEYC G D+ LR K +E + L LEYL
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT----LTEDEIATILQSTLKGLEYL 141
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H + ++RD+K NIL+ +GH L+DF ++
Sbjct: 142 HFMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 9/108 (8%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
A+ N +GT ++APE+I+ G+ D W+ GI E+ G+ P+ + + +
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239
Query: 762 Q---SLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ R P + S + D ++ LVK P+ R A ++ QHPF
Sbjct: 240 NPPPTFRKP--ELWSDNFTDFVKQCLVKSPEQR----ATATQLLQHPF 281
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+N+
Sbjct: 165 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 224
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRL 792
+ + F + S A+D IR LLVK+P R+
Sbjct: 225 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 258
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVG-RKKMPRAQTERE--IMQML 527
H+++ ++LG G V GT +A K + L R+ + R + ERE I++ +
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL F + L++E GG+L ++ S +E A ++ ++L + Y
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 123
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH + + DLKPENI++ + I L DF ++
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+N+
Sbjct: 172 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 231
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRL 792
+ + F + S A+D IR LLVK+P R+
Sbjct: 232 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 265
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVG-RKKMPRAQTERE--IMQML 527
H+++ ++LG G V GT +A K + L R+ + R + ERE I++ +
Sbjct: 13 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL F + L++E GG+L ++ S +E A ++ ++L + Y
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 130
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH + + DLKPENI++ + I L DF ++
Sbjct: 131 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G + GT E++APEI+ E G D W+ G+ + LL G +PF G ETL+N+
Sbjct: 186 GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS 245
Query: 761 SQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRL 792
+ + F + S A+D IR LLVK+P R+
Sbjct: 246 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 279
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVG-RKKMPRAQTERE--IMQML 527
H+++ ++LG G V GT +A K + L R+ + R + ERE I++ +
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + TL F + L++E GG+L ++ S +E A ++ ++L + Y
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEATQFLKQILDGVHY 144
Query: 588 LHMLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
LH + + DLKPENI++ + I L DF ++
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L ++LG G V I T +A K+++ L R + + E I ++L HP
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 64
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + E F LV + GG+L ++SE A + ++L ++ + H+
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 592 GVVYRDLKPENILV---REDGHIMLSDFDLSL 620
G+V+RDLKPEN+L+ + + L+DF L++
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAI 154
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 669 PRLLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSN--SFVGTHEYLAPEIIKGEGHGS 726
P L +A+KS+ LA L +E G + F GT YL+PE+++ + +G
Sbjct: 131 PENLLLASKSKGAAVKLADF-----GLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGK 185
Query: 727 SVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFPG--YPVVSFHARDLIRGLL 784
VD W G+ L+ LL G PF + + + FP + V+ A+DLI +L
Sbjct: 186 PVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKML 245
Query: 785 VKEPDNRLGAVKGAAEIKQHPFF 807
P R+ A+E +HP+
Sbjct: 246 TINPAKRI----TASEALKHPWI 264
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M+ + + LG G Y + T +FA KV+ L+ + + TE I + LD
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
+P + F + F +V+E C L L +++ + +E AR+++ + + ++YL
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQGVQYL 158
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLSLR 621
H V++RDLK N+ + +D + + DF L+ +
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 17/136 (12%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+E G R + GT Y+APE++ +GH VD W+ G L+ LL G+ PF+ S ET
Sbjct: 192 IEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
Query: 757 SNVVSQSLRFPGY--PVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWAL 814
+ P + PV S LIR +L +P R AE+ FF +A
Sbjct: 252 IRIKKNEYSVPRHINPVAS----ALIRRMLHADPTLR----PSVAELLTDEFFTS-GYA- 301
Query: 815 IRCAVPPELPRSCDAV 830
P LP SC V
Sbjct: 302 -----PMRLPTSCLTV 312
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M+ + + LG G Y + T +FA KV+ L+ + + TE I + LD
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
+P + F + F +V+E C L L +++ + +E AR+++ + + ++YL
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQGVQYL 158
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLSLR 621
H V++RDLK N+ + +D + + DF L+ +
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 60/136 (44%), Gaps = 17/136 (12%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+E G R GT Y+APE++ +GH VD W+ G L+ LL G+ PF+ S ET
Sbjct: 192 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
Query: 757 SNVVSQSLRFPGY--PVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWAL 814
+ P + PV S LIR +L +P R AE+ FF +A
Sbjct: 252 IRIKKNEYSVPRHINPVAS----ALIRRMLHADPTLR----PSVAELLTDEFFTS-GYA- 301
Query: 815 IRCAVPPELPRSCDAV 830
P LP SC V
Sbjct: 302 -----PMRLPTSCLTV 312
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M+ + + LG G Y + T +FA KV+ L+ + + TE I + LD
Sbjct: 41 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 100
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
+P + F + F +V+E C L L +++ + +E AR+++ + + ++YL
Sbjct: 101 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQGVQYL 158
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLSLR 621
H V++RDLK N+ + +D + + DF L+ +
Sbjct: 159 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK 191
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 60/136 (44%), Gaps = 17/136 (12%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+E G R GT Y+APE++ +GH VD W+ G L+ LL G+ PF+ S ET
Sbjct: 192 IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
Query: 757 SNVVSQSLRFPGY--PVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWAL 814
+ P + PV S LIR +L +P R AE+ FF +A
Sbjct: 252 IRIKKNEYSVPRHINPVAS----ALIRRMLHADPTLR----PSVAELLTDEFFTS-GYA- 301
Query: 815 IRCAVPPELPRSCDAV 830
P LP SC V
Sbjct: 302 -----PMRLPTSCLTV 312
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF- 766
T E+ APEI+ E G D W G+ + LL G +PF G + ETL NV F
Sbjct: 211 TATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFD 270
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEG 809
+ VS A+D I+ LL KEP RL V A E HP+ +G
Sbjct: 271 EDAFSSVSPEAKDFIKNLLQKEPRKRL-TVHDALE---HPWLKG 310
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 4/156 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
++ + ++LG G G V+ T +F K ++ + + + + + E IM L HP
Sbjct: 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTV---KNEISIMNQLHHP 108
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
L L F + L++E+ GG+L R SE Y+ + L+++H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGEL-FDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNP 626
+V+ D+KPENI+ + D L +NP
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP 203
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS--QSLR 765
GT E+ APE+ +G+ G D W+ G+ + LL G +PF G +DETL NV S ++
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 766 FPGYPVVSFHARDLIRGLLVKEPDNRL 792
+ +S +D IR LL+ +P+ R+
Sbjct: 377 DSAFSGISEDGKDFIRKLLLADPNTRM 403
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI--MQM 526
+ H+ +H++LG G G V+ T FA K F++ + + +EI M +
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAK-----FVMTPHESDKETVRKEIQTMSV 210
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L HP L L F + ++ E+ GG+L + ++ SE A Y+ +V L
Sbjct: 211 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM-SEDEAVEYMRQVCKGLC 269
Query: 587 YLHMLGVVYRDLKPENIL--VREDGHIMLSDFDLS 619
++H V+ DLKPENI+ + + L DF L+
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 2/87 (2%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS--QSLR 765
GT E+ APE+ +G+ G D W+ G+ + LL G +PF G +DETL NV S ++
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 766 FPGYPVVSFHARDLIRGLLVKEPDNRL 792
+ +S +D IR LL+ +P+ R+
Sbjct: 271 DSAFSGISEDGKDFIRKLLLADPNTRM 297
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI--MQM 526
+ H+ +H++LG G G V+ T FA K F++ + + +EI M +
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAK-----FVMTPHESDKETVRKEIQTMSV 104
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L HP L L F + ++ E+ GG+L + ++ SE A Y+ +V L
Sbjct: 105 LRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKM-SEDEAVEYMRQVCKGLC 163
Query: 587 YLHMLGVVYRDLKPENIL--VREDGHIMLSDFDLS 619
++H V+ DLKPENI+ + + L DF L+
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 2/153 (1%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M+ + + LG G Y + T +FA KV+ L+ + + TE I + LD
Sbjct: 25 MKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD 84
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
+P + F + F +V+E C L L +++ + +E AR+++ + + ++YL
Sbjct: 85 NPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKA--VTEPEARYFMRQTIQGVQYL 142
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLSLR 621
H V++RDLK N+ + +D + + DF L+ +
Sbjct: 143 HNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK 175
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 60/136 (44%), Gaps = 17/136 (12%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+E G R GT Y+APE++ +GH VD W+ G L+ LL G+ PF+ S ET
Sbjct: 176 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 235
Query: 757 SNVVSQSLRFPGY--PVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWAL 814
+ P + PV S LIR +L +P R AE+ FF +A
Sbjct: 236 IRIKKNEYSVPRHINPVAS----ALIRRMLHADPTLR----PSVAELLTDEFFTS-GYA- 285
Query: 815 IRCAVPPELPRSCDAV 830
P LP SC V
Sbjct: 286 -----PMRLPTSCLTV 296
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
M + +K+G G G L + + +K + N + K+ ++ E ++ +
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEI-NISRMSSKEREESRREVAVLANMK 81
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
HP + F +VM+YC GGDL Q F E + ++ LAL+++
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H +++RD+K +NI + +DG + L DF ++
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIA 172
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 696 VVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDET 755
V+ T + + +GT YL+PEI + + + + D W G L+EL + F+
Sbjct: 174 VLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL 233
Query: 756 LSNVVSQSLRFPGYPVVSFHA----RDLIRGLLVKEPDNR 791
+ ++S S +P VS H R L+ L + P +R
Sbjct: 234 VLKIISGS-----FPPVSLHYSYDLRSLVSQLFKRNPRDR 268
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYC 552
T+ FA+K++D K+ P + E +++ HP + TL + K+ +V E
Sbjct: 45 ATNXEFAVKIIDKS-----KRDPTEEIEI-LLRYGQHPNIITLKDVYDDGKYVYVVTELX 98
Query: 553 PGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENIL-VREDG 609
GG+L +LRQK FFSE+ A + + +EYLH GVV+RDLKP NIL V E G
Sbjct: 99 KGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154
Query: 610 H---IMLSDFDLS 619
+ I + DF +
Sbjct: 155 NPESIRICDFGFA 167
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 710 THEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGND---ETLSNVVSQSLRF 766
T ++APE+++ +G+ ++ D W+ G+ L+ L G TPF +D E L+ + S
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 767 PG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNW 812
G + VS A+DL+ L +P RL AA + +HP+ ++W
Sbjct: 243 SGGYWNSVSDTAKDLVSKXLHVDPHQRL----TAALVLRHPWI--VHW 284
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 16/133 (12%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYC 552
T+ FA+K++D K+ P + E +++ HP + TL + K+ +V E
Sbjct: 45 ATNMEFAVKIIDKS-----KRDPTEEIEI-LLRYGQHPNIITLKDVYDDGKYVYVVTELM 98
Query: 553 PGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENIL-VREDG 609
GG+L +LRQK FFSE+ A + + +EYLH GVV+RDLKP NIL V E G
Sbjct: 99 KGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154
Query: 610 H---IMLSDFDLS 619
+ I + DF +
Sbjct: 155 NPESIRICDFGFA 167
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 710 THEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGND---ETLSNVVSQSLRF 766
T ++APE+++ +G+ ++ D W+ G+ L+ +L G TPF +D E L+ + S
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSL 242
Query: 767 PG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNW 812
G + VS A+DL+ +L +P RL AA + +HP+ ++W
Sbjct: 243 SGGYWNSVSDTAKDLVSKMLHVDPHQRL----TAALVLRHPWI--VHW 284
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
++ + ++LG G V T FA K+++ L R + + E I + L HP
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 88
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ L E F LV + GG+L F+SE A + ++L ++ Y H
Sbjct: 89 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 146
Query: 591 LGVVYRDLKPENILV---REDGHIMLSDFDLSL 620
G+V+R+LKPEN+L+ + + L+DF L++
Sbjct: 147 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 705 NSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSL 764
+ F GT YL+PE++K + + VD W G+ L+ LL G PF + + + +
Sbjct: 188 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 247
Query: 765 RFPG--YPVVSFHARDLIRGLLVKEPDNRLGA 794
+P + V+ A+ LI +L P R+ A
Sbjct: 248 DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITA 279
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 16/132 (12%)
Query: 494 TSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCP 553
T+ +A+KV+D K+ P + E +++ HP + TL + K LV E
Sbjct: 51 TNMEYAVKVIDKS-----KRDPSEEIEI-LLRYGQHPNIITLKDVYDDGKHVYLVTELMR 104
Query: 554 GGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENIL-VREDGH 610
GG+L +LRQK FFSE+ A F + + +EYLH GVV+RDLKP NIL V E G+
Sbjct: 105 GGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
Query: 611 ---IMLSDFDLS 619
+ + DF +
Sbjct: 161 PECLRICDFGFA 172
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 710 THEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGND---ETLSNVVSQSLRF 766
T ++APE++K +G+ D W+ GI L+ +L G TPF +D E L+ + S
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 767 PG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
G + VS A+DL+ +L +P RL A ++ QHP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRL----TAKQVLQHPW 285
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALK-VMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLF 536
LG G G VY + A+K + + D R P + E + + L H +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHE-EIALHKHLKHKNIVQYL 85
Query: 537 AHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
F+ F + ME PGG L +LR K +EQ FY ++L L+YLH +V+
Sbjct: 86 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 596 RDLKPENILVRE-DGHIMLSDFDLSLRCA-VNP 626
RD+K +N+L+ G + +SDF S R A +NP
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 704 SNSFVGTHEYLAPEII-KG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
+ +F GT +Y+APEII KG G+G + D W+ G + E+ G+ PF G + V
Sbjct: 180 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG 239
Query: 762 QSLRFPGYP-VVSFHARDLIRGLLVKEPDNR 791
P P +S A+ I +PD R
Sbjct: 240 MFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 16/132 (12%)
Query: 494 TSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCP 553
T+ +A+KV+D K+ P + E +++ HP + TL + K LV E
Sbjct: 51 TNMEYAVKVIDKS-----KRDPSEEIEI-LLRYGQHPNIITLKDVYDDGKHVYLVTELMR 104
Query: 554 GGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENIL-VREDGH 610
GG+L +LRQK FFSE+ A F + + +EYLH GVV+RDLKP NIL V E G+
Sbjct: 105 GGELLDKILRQK----FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGN 160
Query: 611 ---IMLSDFDLS 619
+ + DF +
Sbjct: 161 PECLRICDFGFA 172
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 9/102 (8%)
Query: 710 THEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGND---ETLSNVVSQSLRF 766
T ++APE++K +G+ D W+ GI L+ +L G TPF +D E L+ + S
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 767 PG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
G + VS A+DL+ +L +P RL A ++ QHP+
Sbjct: 248 SGGNWNTVSETAKDLVSKMLHVDPHQRL----TAKQVLQHPW 285
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L++ +G G V + T +A K+++ L R + + E I ++L H
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ-KLEREARICRLLKHSN 64
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + E F LV + GG+L ++SE A + ++L A+ + H +
Sbjct: 65 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 592 GVVYRDLKPENILVR---EDGHIMLSDFDLSL 620
GVV+RDLKPEN+L+ + + L+DF L++
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAI 154
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 695 LVVEPTGARSN--SFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGN 752
L +E G + F GT YL+PE+++ E +G VD W G+ L+ LL G PF
Sbjct: 152 LAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQ 211
Query: 753 DETLSNVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
+ + + + FP + V+ A++LI +L P R+ A E +HP+
Sbjct: 212 HKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRI----TAHEALKHPW 263
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGE------GHGSSVDWWTFGIFLFELLYGRTPFKGS 750
+EP G + GT YLAPEI+K G+G VD W G+ LF LL G PF
Sbjct: 250 LEP-GEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR 308
Query: 751 GNDETLSNVVSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
L ++ +F P + S +DLI LL +P+ RL A + QHPFFE
Sbjct: 309 RQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL----QHPFFE 364
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 70/138 (50%), Gaps = 16/138 (11%)
Query: 498 FALKVMDNDFLVGRKKMP------RAQTERE---IMQMLDHPFLPTLFAHFTTEKFSCLV 548
FA+K+M+ + + P R T RE + Q+ HP + TL + + F LV
Sbjct: 122 FAVKIME---VTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 549 MEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVRED 608
+ G+L ++ + SE+ R + +L A+ +LH +V+RDLKPENIL+ ++
Sbjct: 179 FDLMRKGELFDYLTEKVA--LSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDN 236
Query: 609 GHIMLSDFDLSLRCAVNP 626
I LSDF S C + P
Sbjct: 237 MQIRLSDFGFS--CHLEP 252
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVGRKKMPRAQTEREIMQMLDHPFLPTLF 536
LG G V+ T LFA+KV +N FL + + E E+++ L+H + LF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFL---RPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 537 A--HFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA--EVLLALEYLHMLG 592
A TT + L+ME+CP G L+ + + +PS + + F + +V+ + +L G
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 593 VVYRDLKPENIL--VREDGHIM--LSDF 616
+V+R++KP NI+ + EDG + L+DF
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
Query: 709 GTHEYLAPEIIK--------GEGHGSSVDWWTFGIFLFELLYGRTPFK 748
GT EYL P++ + + +G++VD W+ G+ + G PF+
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 13/148 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDN-DFLVGRKKMPRAQTEREIMQMLDHPFLPTLF 536
LG G V+ T LFA+KV +N FL + + E E+++ L+H + LF
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFL---RPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 537 A--HFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA--EVLLALEYLHMLG 592
A TT + L+ME+CP G L+ + + +PS + + F + +V+ + +L G
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLRDVVGGMNHLRENG 132
Query: 593 VVYRDLKPENIL--VREDGHIM--LSDF 616
+V+R++KP NI+ + EDG + L+DF
Sbjct: 133 IVHRNIKPGNIMRVIGEDGQSVYKLTDF 160
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 8/51 (15%)
Query: 706 SFVGTHEYLAPEIIK--------GEGHGSSVDWWTFGIFLFELLYGRTPFK 748
S GT EYL P++ + + +G++VD W+ G+ + G PF+
Sbjct: 174 SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFR 224
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD--HPFLPT 534
K+G G G V +A + + L A+K MD RK+ R E++ M D H +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
++ + +VME+ GG L + +R EQ A +A VL AL LH GV+
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLA-VLQALSVLHAQGVI 269
Query: 595 YRDLKPENILVREDGHIMLSDF 616
+RD+K ++IL+ DG + LSDF
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDF 291
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
R VGT ++APE+I +G VD W+ GI + E++ G P+ + + ++
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 361
Query: 763 SL--RFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+L R VS + + LLV++P R AAE+ +HPF
Sbjct: 362 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 404
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALK-VMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLF 536
LG G G VY + A+K + + D R P + E + + L H +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERD---SRYSQPLHE-EIALHKHLKHKNIVQYL 71
Query: 537 AHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
F+ F + ME PGG L +LR K +EQ FY ++L L+YLH +V+
Sbjct: 72 GSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 596 RDLKPENILVRE-DGHIMLSDFDLSLRCA-VNP 626
RD+K +N+L+ G + +SDF S R A +NP
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 164
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 704 SNSFVGTHEYLAPEII-KG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS 761
+ +F GT +Y+APEII KG G+G + D W+ G + E+ G+ PF G + V
Sbjct: 166 TETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG 225
Query: 762 QSLRFPGYP-VVSFHARDLIRGLLVKEPDNR 791
P P +S A+ I +PD R
Sbjct: 226 MFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 7/131 (5%)
Query: 498 FALKVMDNDFLVGRKKMPRAQTERE--IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGG 555
FA+K++D + +RE I ML HP + L ++++ +V E+ G
Sbjct: 52 FAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGA 111
Query: 556 DL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV---REDGH 610
DL ++++ +SE A Y+ ++L AL Y H +++RD+KPEN+L+
Sbjct: 112 DLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAP 171
Query: 611 IMLSDFDLSLR 621
+ L DF ++++
Sbjct: 172 VKLGDFGVAIQ 182
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
+G + VGT ++APE++K E +G VD W G+ LF LL G PF G+ + +
Sbjct: 186 SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGI 244
Query: 760 VSQSLRFP--GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+ + + +S A+DL+R +L+ +P R+ E HP+ +
Sbjct: 245 IKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVY----EALNHPWLK 291
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 707 FVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF 766
+GT EYLAPEI+ + ++ D W GI + LL +PF G N ET N+ ++ +
Sbjct: 193 IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDY 252
Query: 767 P--GYPVVSFHARDLIRGLLVKEPDNR 791
+ VS A D I+ LLVK P+ R
Sbjct: 253 SEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVR 606
L++EY GG++ L + + SE + ++L + YLH +V+ DLKP+NIL+
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
Query: 607 ED---GHIMLSDFDLS 619
G I + DF +S
Sbjct: 166 SIYPLGDIKIVDFGMS 181
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
++ + ++LG G V T FA K+++ L R + + E I + L HP
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 64
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ L E F LV + GG+L F+SE A + ++L ++ Y H
Sbjct: 65 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 591 LGVVYRDLKPENILV---REDGHIMLSDFDLSL 620
G+V+R+LKPEN+L+ + + L+DF L++
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 155
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 705 NSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSL 764
+ F GT YL+PE++K + + VD W G+ L+ LL G PF + + + +
Sbjct: 164 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 223
Query: 765 RFPG--YPVVSFHARDLIRGLLVKEPDNRLGA 794
+P + V+ A+ LI +L P R+ A
Sbjct: 224 DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITA 255
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
++ + ++LG G V T FA K+++ L R + + E I + L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ L E F LV + GG+L F+SE A + ++L ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 591 LGVVYRDLKPENILV---REDGHIMLSDFDLSL 620
G+V+R+LKPEN+L+ + + L+DF L++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 705 NSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSL 764
+ F GT YL+PE++K + + VD W G+ L+ LL G PF + + + +
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 224
Query: 765 RFPG--YPVVSFHARDLIRGLLVKEPDNRLGA 794
+P + V+ A+ LI +L P R+ A
Sbjct: 225 DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITA 256
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 75/165 (45%), Gaps = 13/165 (7%)
Query: 463 QHGCMGMRHFKLH--------KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKM 514
Q G GM++ K +K+G G G V+ T + A+K++D ++
Sbjct: 7 QSGLPGMQNLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEI 64
Query: 515 PRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAA 574
Q E ++ D P++ + + + ++MEY GG L + P E
Sbjct: 65 EDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQI 121
Query: 575 RFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ E+L L+YLH ++RD+K N+L+ E G + L+DF ++
Sbjct: 122 ATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTP 746
T + N FVGT ++APE+IK + S D W+ GI EL G P
Sbjct: 172 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
++ + ++LG G V T FA K+++ L R + + E I + L HP
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD-FQKLEREARICRKLQHP 65
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ L E F LV + GG+L F+SE A + ++L ++ Y H
Sbjct: 66 NIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 591 LGVVYRDLKPENILV---REDGHIMLSDFDLSL 620
G+V+R+LKPEN+L+ + + L+DF L++
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 156
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Query: 705 NSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSL 764
+ F GT YL+PE++K + + VD W G+ L+ LL G PF + + + +
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAY 224
Query: 765 RFPG--YPVVSFHARDLIRGLLVKEPDNRLGA 794
+P + V+ A+ LI +L P R+ A
Sbjct: 225 DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITA 256
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD--HPFLPT 534
K+G G G V +A + + L A+K MD RK+ R E++ M D H +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
++ + +VME+ GG L + +R EQ A +A VL AL LH GV+
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLA-VLQALSVLHAQGVI 149
Query: 595 YRDLKPENILVREDGHIMLSDF 616
+RD+K ++IL+ DG + LSDF
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDF 171
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
R VGT ++APE+I +G VD W+ GI + E++ G P+ + + ++
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 241
Query: 763 SL--RFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+L R VS + + LLV++P R AAE+ +HPF
Sbjct: 242 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 284
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 695 LVVEPTGARSN--SFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGN 752
L +E G + F GT YL+PE+++ + +G VD W G+ L+ LL G PF
Sbjct: 170 LAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 229
Query: 753 DETLSNVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+ + + FP + V+ A+DLI +L P R+ AAE +HP+
Sbjct: 230 HRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI----TAAEALKHPWI 282
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L ++LG G V + +A K+++ L R + + E I ++L HP
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 82
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + E L+ + GG+L ++SE A + ++L A+ + H +
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 592 GVVYRDLKPENILVR---EDGHIMLSDFDLSL 620
GVV+RDLKPEN+L+ + + L+DF L++
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAI 172
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD--HPFLPT 534
K+G G G V +A + + L A+K MD RK+ R E++ M D H +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
++ + +VME+ GG L + +R EQ A +A VL AL LH GV+
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLA-VLQALSVLHAQGVI 192
Query: 595 YRDLKPENILVREDGHIMLSDF 616
+RD+K ++IL+ DG + LSDF
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDF 214
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
R VGT ++APE+I +G VD W+ GI + E++ G P+ + + ++
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 284
Query: 763 SL--RFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+L R VS + + LLV++P R AAE+ +HPF
Sbjct: 285 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 327
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD--HPFLPT 534
K+G G G V +A + + L A+K MD RK+ R E++ M D H +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
++ + +VME+ GG L + +R EQ A +A VL AL LH GV+
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLA-VLQALSVLHAQGVI 147
Query: 595 YRDLKPENILVREDGHIMLSDF 616
+RD+K ++IL+ DG + LSDF
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDF 169
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
R VGT ++APE+I +G VD W+ GI + E++ G P+ + + ++
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 239
Query: 763 SL--RFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+L R VS + + LLV++P R AAE+ +HPF
Sbjct: 240 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 282
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 8/117 (6%)
Query: 695 LVVEPTGARSN--SFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGN 752
L +E G + F GT YL+PE+++ + +G VD W G+ L+ LL G PF
Sbjct: 159 LAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ 218
Query: 753 DETLSNVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+ + + FP + V+ A+DLI +L P R+ AAE +HP+
Sbjct: 219 HRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI----TAAEALKHPWI 271
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 6/152 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L ++LG G V + +A +++ L R + + E I ++L HP
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ-KLEREARICRLLKHPN 71
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + E L+ + GG+L ++SE A + ++L A+ + H +
Sbjct: 72 IVRLHDSISEEGHHYLIFDLVTGGEL--FEDIVAREYYSEADASHCIQQILEAVLHCHQM 129
Query: 592 GVVYRDLKPENILVR---EDGHIMLSDFDLSL 620
GVV+R+LKPEN+L+ + + L+DF L++
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAI 161
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 701 GARSNSFVGTHEYLAPEIIKGE------GHGSSVDWWTFGIFLFELLYGRTPFKGSGNDE 754
G + S GT YLAPEII+ G+G VD W+ G+ ++ LL G PF
Sbjct: 177 GEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 755 TLSNVVSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
L ++S + +F P + S +DL+ LV +P R A + A HPFF+
Sbjct: 237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 288
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
HP + L + T F LV + G+L ++ + SE+ R + +L + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICAL 140
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNP 626
H L +V+RDLKPENIL+ +D +I L+DF S C ++P
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDP 176
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD--HPFLPT 534
K+G G G V +A + + L A+K MD RK+ R E++ M D H +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
++ + +VME+ GG L + +R EQ A +A VL AL LH GV+
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLA-VLQALSVLHAQGVI 142
Query: 595 YRDLKPENILVREDGHIMLSDF 616
+RD+K ++IL+ DG + LSDF
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDF 164
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
R VGT ++APE+I +G VD W+ GI + E++ G P+ + + ++
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 234
Query: 763 SL--RFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+L R VS + + LLV++P R AAE+ +HPF
Sbjct: 235 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 277
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD--HPFLPT 534
K+G G G V +A + + L A+K MD RK+ R E++ M D H +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDL-----RKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
++ + +VME+ GG L + +R EQ A +A VL AL LH GV+
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIAAVCLA-VLQALSVLHAQGVI 138
Query: 595 YRDLKPENILVREDGHIMLSDF 616
+RD+K ++IL+ DG + LSDF
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDF 160
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 52/107 (48%), Gaps = 7/107 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
R VGT ++APE+I +G VD W+ GI + E++ G P+ + + ++
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 230
Query: 763 SL--RFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+L R VS + + LLV++P R AAE+ +HPF
Sbjct: 231 NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 273
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G + T +FA K++ L+ + + E I + L H +
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 538 HFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRD 597
F F +V+E C L L +++ + +E AR+Y+ +++L +YLH V++RD
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 598 LKPENILVREDGHIMLSDFDLSLR 621
LK N+ + ED + + DF L+ +
Sbjct: 147 LKLGNLFLNEDLEVKIGDFGLATK 170
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
VE G R + GT Y+APE++ +GH VD W+ G ++ LL G+ PF+ S ET
Sbjct: 171 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 230
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ P + ++ A LI+ +L +P R
Sbjct: 231 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 263
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G + T +FA K++ L+ + + E I + L H +
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 538 HFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRD 597
F F +V+E C L L +++ + +E AR+Y+ +++L +YLH V++RD
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 598 LKPENILVREDGHIMLSDFDLSLR 621
LK N+ + ED + + DF L+ +
Sbjct: 167 LKLGNLFLNEDLEVKIGDFGLATK 190
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
VE G R GT Y+APE++ +GH VD W+ G ++ LL G+ PF+ S ET
Sbjct: 191 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 250
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ P + ++ A LI+ +L +P R
Sbjct: 251 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 283
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G + T +FA K++ L+ + + E I + L H +
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 538 HFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRD 597
F F +V+E C L L +++ + +E AR+Y+ +++L +YLH V++RD
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 598 LKPENILVREDGHIMLSDFDLSLR 621
LK N+ + ED + + DF L+ +
Sbjct: 165 LKLGNLFLNEDLEVKIGDFGLATK 188
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
VE G R GT Y+APE++ +GH VD W+ G ++ LL G+ PF+ S ET
Sbjct: 189 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 248
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ P + ++ A LI+ +L +P R
Sbjct: 249 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G G V + T +A+KV+ N K E E+++ LDHP + LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 538 HFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+V E GG+L ++++K+ FSE A + +V + Y+H +V+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 596 RDLKPENILV---REDGHIMLSDFDLS 619
RDLKPENIL+ +D I + DF LS
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF- 766
+GT Y+APE+++G + D W+ G+ L+ LL G PF G + L V + F
Sbjct: 184 IGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
P + +S A+DLIR +L P R+ A + +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCL----EHPWIQ 281
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G + T +FA K++ L+ + + E I + L H +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 538 HFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRD 597
F F +V+E C L L +++ + +E AR+Y+ +++L +YLH V++RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 598 LKPENILVREDGHIMLSDFDLSLR 621
LK N+ + ED + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
VE G R + GT Y+APE++ +GH VD W+ G ++ LL G+ PF+ S ET
Sbjct: 167 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 226
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ P + ++ A LI+ +L +P R
Sbjct: 227 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 259
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G G V + T +A+KV+ N K E E+++ LDHP + LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 538 HFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+V E GG+L ++++K+ FSE A + +V + Y+H +V+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 596 RDLKPENILV---REDGHIMLSDFDLS 619
RDLKPENIL+ +D I + DF LS
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF- 766
+GT Y+APE+++G + D W+ G+ L+ LL G PF G + L V + F
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
P + +S A+DLIR +L P R+ A + +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G + T +FA K++ L+ + + E I + L H +
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 538 HFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRD 597
F F +V+E C L L +++ + +E AR+Y+ +++L +YLH V++RD
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 598 LKPENILVREDGHIMLSDFDLSLR 621
LK N+ + ED + + DF L+ +
Sbjct: 143 LKLGNLFLNEDLEVKIGDFGLATK 166
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
VE G R + GT Y+APE++ +GH VD W+ G ++ LL G+ PF+ S ET
Sbjct: 167 VEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 226
Query: 757 SNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ P + ++ A LI+ +L +P R
Sbjct: 227 LRIKKNEYSIPKH--INPVAASLIQKMLQTDPTAR 259
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD--HPFLPT 534
K+G G G V +A T A+K MD RK+ R E++ M D H +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDL-----RKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
+++ + +VME+ GG L + +R EQ A ++ VL AL YLH GV+
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLS-VLRALSYLHNQGVI 163
Query: 595 YRDLKPENILVREDGHIMLSDF 616
+RD+K ++IL+ DG I LSDF
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDF 185
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
+ VGT ++APE+I +G+ VD W+ GI + E++ G P+ + + +
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRR-IRD 255
Query: 763 SL--RFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
SL R VS R + +LV+EP R A E+ HPF +
Sbjct: 256 SLPPRVKDLHKVSSVLRGFLDLMLVREPSQR----ATAQELLGHPFLK 299
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 72/147 (48%), Gaps = 10/147 (6%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G G V + T +A+KV+ N K E E+++ LDHP + LF
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVI-NKASAKNKDTSTILREVELLKKLDHPNIMKLFE 88
Query: 538 HFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+V E GG+L ++++K+ FSE A + +V + Y+H +V+
Sbjct: 89 ILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 596 RDLKPENILV---REDGHIMLSDFDLS 619
RDLKPENIL+ +D I + DF LS
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLS 171
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 7/103 (6%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF- 766
+GT Y+APE+++G + D W+ G+ L+ LL G PF G + L V + F
Sbjct: 184 IGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
P + +S A+DLIR +L P R+ A + +HP+ +
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRI----TATQCLEHPWIQ 281
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G G VY A + S + A+K M +K E +Q L HP
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 119
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ E + LVMEYC G +L + E AA + A L L YLH +++
Sbjct: 120 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGA--LQGLAYLHSHNMIH 177
Query: 596 RDLKPENILVREDGHIMLSDF 616
RD+K NIL+ E G + L DF
Sbjct: 178 RDVKAGNILLSEPGLVKLGDF 198
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHG---SSVDWWTFGIFLFELLYGRTPF 747
A +N FVGT ++APE+I G VD W+ GI EL + P
Sbjct: 205 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F +K+G G G V+ T + A+K++D ++ Q E ++ D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ + + + ++MEY GG L + P E + E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
++RD+K N+L+ E G + L+DF ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTP 746
T + N+FVGT ++APE+IK + S D W+ GI EL G P
Sbjct: 157 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G + T +FA K++ L+ + + E I + L H +
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 538 HFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRD 597
F F +V+E C L L +++ + +E AR+Y+ +++L +YLH V++RD
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKA--LTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 598 LKPENILVREDGHIMLSDFDLSLR 621
LK N+ + ED + + DF L+ +
Sbjct: 141 LKLGNLFLNEDLEVKIGDFGLATK 164
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
VE G R GT Y+APE++ +GH VD W+ G ++ LL G+ PF+ S ET
Sbjct: 165 VEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETY 224
Query: 757 SNVVSQSLRFPGY--PVVSFHARDLIRGLLVKEPDNR 791
+ P + PV A LI+ +L +P R
Sbjct: 225 LRIKKNEYSIPKHINPV----AASLIQKMLQTDPTAR 257
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F +K+G G G V+ T + A+K++D ++ Q E ++ D P+
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ + + + ++MEY GG L + P E + E+L L+YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 123
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
++RD+K N+L+ E G + L+DF ++
Sbjct: 124 KKIHRDIKAANVLLSEHGEVKLADFGVA 151
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTP 746
T + N FVGT ++APE+IK + S D W+ GI EL G P
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 2/141 (1%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G G VY A + S + A+K M +K E +Q L HP
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQY 80
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ E + LVMEYC G +L + E AA + A L L YLH +++
Sbjct: 81 RGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGA--LQGLAYLHSHNMIH 138
Query: 596 RDLKPENILVREDGHIMLSDF 616
RD+K NIL+ E G + L DF
Sbjct: 139 RDVKAGNILLSEPGLVKLGDF 159
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGHG---SSVDWWTFGIFLFELLYGRTPF 747
A +N FVGT ++APE+I G VD W+ GI EL + P
Sbjct: 166 APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 701 GARSNSFVGTHEYLAPEIIKGE------GHGSSVDWWTFGIFLFELLYGRTPFKGSGNDE 754
G + GT YLAPEII+ G+G VD W+ G+ ++ LL G PF
Sbjct: 164 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 223
Query: 755 TLSNVVSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
L ++S + +F P + S +DL+ LV +P R A + A HPFF+
Sbjct: 224 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 275
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
HP + L + T F LV + G+L ++ + SE+ R + +L + L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICAL 127
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNP 626
H L +V+RDLKPENIL+ +D +I L+DF S C ++P
Sbjct: 128 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDP 163
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
Query: 701 GARSNSFVGTHEYLAPEIIKGE------GHGSSVDWWTFGIFLFELLYGRTPFKGSGNDE 754
G + GT YLAPEII+ G+G VD W+ G+ ++ LL G PF
Sbjct: 177 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQML 236
Query: 755 TLSNVVSQSLRF--PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
L ++S + +F P + S +DL+ LV +P R A + A HPFF+
Sbjct: 237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA----HPFFQ 288
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
HP + L + T F LV + G+L ++ + SE+ R + +L + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKETRKIMRALLEVICAL 140
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNP 626
H L +V+RDLKPENIL+ +D +I L+DF S C ++P
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFS--CQLDP 176
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 5/143 (3%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLF 536
++G G G VY T + A+K++D ++ Q E ++ D P++ F
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 537 AHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYR 596
+ ++MEY GG L + P E + E+L L+YLH ++R
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGP---LEETYIATILREILKGLDYLHSERKIHR 140
Query: 597 DLKPENILVREDGHIMLSDFDLS 619
D+K N+L+ E G + L+DF ++
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVA 163
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTP 746
T + N FVGT ++APE+IK + D W+ GI EL G P
Sbjct: 169 TQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 5/148 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F +K+G G G V+ T + A+K++D ++ Q E ++ D P+
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ + + + ++MEY GG L + P E + E+L L+YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGP---LDETQIATILREILKGLDYLHSE 143
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
++RD+K N+L+ E G + L+DF ++
Sbjct: 144 KKIHRDIKAANVLLSEHGEVKLADFGVA 171
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTP 746
T + N+FVGT ++APE+IK + S D W+ GI EL G P
Sbjct: 177 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF--PGY 769
EY APE+ + + ++ D W+ G ++ LL G PF N + + N+++ F +
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAF 227
Query: 770 PVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+S A D + LLVKE +R+ A+E QHP+ +
Sbjct: 228 KEISIEAMDFVDRLLVKERKSRM----TASEALQHPWLK 262
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 472 FKLHKKLGCGDIGTVY-LAELIGTSCLFA--LKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+ + + LG G+ G V+ E A +KV D ++ +K++ I+ +
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEIS-------ILNIAR 59
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEY 587
H + L F + + ++ E+ G D + + S F +E+ YV +V AL++
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLD--IFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 588 LHMLGVVYRDLKPENIL 604
LH + + D++PENI+
Sbjct: 118 LHSHNIGHFDIRPENII 134
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 22/152 (14%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G V+ A+L+ + + KV+ + R E +IM+++ HP + L
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR--------ELQIMRIVKHPNVVDL 97
Query: 536 FAHFTT------EKFSCLVMEYCPG----GDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
A F + E F LV+EY P H + KQ + Y+ ++L +L
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPML---LIKLYMYQLLRSL 154
Query: 586 EYLHMLGVVYRDLKPENILVR-EDGHIMLSDF 616
Y+H +G+ +RD+KP+N+L+ G + L DF
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDF 186
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 61/153 (39%), Gaps = 34/153 (22%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + +++D W+ G + EL+ G+ F G + L +
Sbjct: 195 GEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEI 254
Query: 760 VSQSLRFPG---------------YPVVSFH-------------ARDLIRGLLVKEPDNR 791
+ + L P +P + H A DLI LL P R
Sbjct: 255 I-KVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSAR 313
Query: 792 LGAVKGAAEIKQHPFFEGLNWALIRCAVPPELP 824
L A++ HPFF+ L R ELP
Sbjct: 314 LTAIEALC----HPFFDELRTGEARMPNGRELP 342
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-----HVL-RQKQPSRFFSEQA 573
E + M HP + + + F + LVM+ GG + H++ + + S E
Sbjct: 58 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 117
Query: 574 ARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ EVL LEYLH G ++RD+K NIL+ EDG + ++DF +S
Sbjct: 118 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 705 NSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGS----------GND 753
+FVGT ++APE+++ G+ D W+FGI EL G P+ ND
Sbjct: 179 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND 238
Query: 754 -ETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+L V Y SF R +I L K+P+ R AAE+ +H FF+
Sbjct: 239 PPSLETGVQDKEMLKKYG-KSF--RKMISLCLQKDPEKR----PTAAELLRHKFFQ 287
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D +++ +IM+ LDH + L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL-------QIMRKLDHCNIVRL 112
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 210 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 269
Query: 760 V 760
+
Sbjct: 270 I 270
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-----HVL-RQKQPSRFFSEQA 573
E + M HP + + + F + LVM+ GG + H++ + + S E
Sbjct: 63 EIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDEST 122
Query: 574 ARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ EVL LEYLH G ++RD+K NIL+ EDG + ++DF +S
Sbjct: 123 IATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 19/115 (16%)
Query: 706 SFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGS----------GND- 753
+FVGT ++APE+++ G+ D W+FGI EL G P+ ND
Sbjct: 185 TFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP 244
Query: 754 ETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+L V Y SF R +I L K+P+ R AAE+ +H FF+
Sbjct: 245 PSLETGVQDKEMLKKYG-KSF--RKMISLCLQKDPEKR----PTAAELLRHKFFQ 292
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D +++ +IM+ LDH + L
Sbjct: 62 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL-------QIMRKLDHCNIVRL 114
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 175 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 203
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S++ + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 212 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 271
Query: 760 V 760
+
Sbjct: 272 I 272
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D +++ +IM+ LDH + L
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL-------QIMRKLDHCNIVRL 116
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 177 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 205
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S++ + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 214 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 273
Query: 760 V 760
+
Sbjct: 274 I 274
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D +++ +IM+ LDH + L
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL-------QIMRKLDHCNIVRL 112
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S++ + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 210 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 269
Query: 760 V 760
+
Sbjct: 270 I 270
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D +++ +IM+ LDH + L
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNREL-------QIMRKLDHCNIVRL 106
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S++ + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 204 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 263
Query: 760 V 760
+
Sbjct: 264 I 264
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+ +K+G G GTV+ AE G+ + +M+ DF R + E IM+ L HP
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKI-LMEQDFHAER--VNEFLREVAIMKRLRHPN 95
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHM 590
+ T +V EY G L+ L K +R ++ R +A +V + YLH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 591 LG--VVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDLK N+LV + + + DF LS
Sbjct: 156 RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS 186
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
S GT E++APE+++ E D ++FG+ L+EL + P+
Sbjct: 196 SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 710 THEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGND-------ETLSNVVSQ 762
T Y APE++ G+ S D W+ G+ L+ +L G+ PF+ E + +
Sbjct: 172 TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG 231
Query: 763 SLRFPG--YPVVSFHARDLIRGLLVKEPDNRL 792
F G + VS A+DLI+GLL +P+ RL
Sbjct: 232 DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 16/128 (12%)
Query: 498 FALKVMDNDFLVGRKKMPRAQTEREIMQML---DHPFLPTLFAHFTTEKFSCLVMEYCPG 554
FA+K++ K+M A T++EI + HP + L F + + LVME G
Sbjct: 39 FAVKIIS-------KRM-EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90
Query: 555 GDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDG---HI 611
G+L + + + FSE A + + +++ A+ ++H +GVV+RDLKPEN+L ++ I
Sbjct: 91 GEL--FERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEI 148
Query: 612 MLSDFDLS 619
+ DF +
Sbjct: 149 KIIDFGFA 156
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + L G+ R E +IM+ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNR---ELQIMRKLDHCNIVRL 78
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
Query: 760 V 760
+
Sbjct: 236 I 236
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 105 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 157
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 218 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 246
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S++ + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 255 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 314
Query: 760 V 760
+
Sbjct: 315 I 315
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 90
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 188 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 247
Query: 760 V 760
+
Sbjct: 248 I 248
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 83
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S++ + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 181 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 240
Query: 760 V 760
+
Sbjct: 241 I 241
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 86
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 175
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 184 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 243
Query: 760 V 760
+
Sbjct: 244 I 244
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 97
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 195 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 254
Query: 760 V 760
+
Sbjct: 255 I 255
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 90
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 188 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 247
Query: 760 V 760
+
Sbjct: 248 I 248
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 91
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S++ + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 189 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 248
Query: 760 V 760
+
Sbjct: 249 I 249
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 12/148 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPR------AQTEREIMQMLDHPF 531
LG G TVY A T+ + A+K + +G + + A E +++Q L HP
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIK----LGHRSEAKDGINRTALREIKLLQELSHPN 73
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L F + LV ++ DL V+ K S + + Y+ L LEYLH
Sbjct: 74 IIGLLDAFGHKSNISLVFDFMET-DLEVI-IKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+L+ E+G + L+DF L+
Sbjct: 132 WILHRDLKPNNLLLDENGVLKLADFGLA 159
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 46/118 (38%), Gaps = 29/118 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGND--------ETLSN 758
V T Y APE++ G +G VD W G L ELL R PF +D ETL
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGT 231
Query: 759 VVSQSL-------------RFPGYPVVSFHAR------DLIRGLLVKEPDNRLGAVKG 797
+ FPG P+ + DLI+GL + P R+ A +
Sbjct: 232 PTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+++ ++LG G G V T A+K + + K R E +IM+ L+HP
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPN 74
Query: 532 L------PTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLA 584
+ P L MEYC GGDL L Q + E R ++++ A
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 585 LEYLHMLGVVYRDLKPENILVR 606
L YLH +++RDLKPENI+++
Sbjct: 135 LRYLHENRIIHRDLKPENIVLQ 156
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
G FVGT +YLAPE+++ + + +VD+W+FG FE + G PF
Sbjct: 178 GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAEL--IG--TSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K +LG G+ G+V L +G T L A+K + + G + Q E +I++
Sbjct: 10 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILK 66
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L F+ ++ + LVMEY P G L Q+ +R + + Y +++
Sbjct: 67 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL-LYSSQICK 125
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL V+RDL NILV + H+ ++DF L+
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 161
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 9/142 (6%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+++ ++LG G G V T A+K + + K R E +IM+ L+HP
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPN 73
Query: 532 L------PTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLA 584
+ P L MEYC GGDL L Q + E R ++++ A
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 585 LEYLHMLGVVYRDLKPENILVR 606
L YLH +++RDLKPENI+++
Sbjct: 134 LRYLHENRIIHRDLKPENIVLQ 155
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
G FVGT +YLAPE+++ + + +VD+W+FG FE + G PF
Sbjct: 177 GELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 78
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
Query: 760 V 760
+
Sbjct: 236 I 236
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 27 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 79
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 177 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 236
Query: 760 V 760
+
Sbjct: 237 I 237
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAEL--IG--TSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K +LG G+ G+V L +G T L A+K + + G + Q E +I++
Sbjct: 11 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILK 67
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L F+ ++ + LVMEY P G L Q+ +R + + Y +++
Sbjct: 68 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL-LYSSQICK 126
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL V+RDL NILV + H+ ++DF L+
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 162
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 78
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
Query: 760 V 760
+
Sbjct: 236 I 236
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 475 HKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD--HPFL 532
+ K+G G G V LA + A+K+MD RK+ R E++ M D H +
Sbjct: 50 YVKIGEGSTGIVCLAREKHSGRQVAVKMMDL-----RKQQRRELLFNEVVIMRDYQHFNV 104
Query: 533 PTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLG 592
++ + + ++ME+ GG L + + R EQ A A VL AL YLH G
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQ--VRLNEEQIATVCEA-VLQALAYLHAQG 161
Query: 593 VVYRDLKPENILVREDGHIMLSDF 616
V++RD+K ++IL+ DG + LSDF
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDF 185
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV-S 761
+ VGT ++APE+I + + VD W+ GI + E++ G P+ + + + S
Sbjct: 197 KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDS 256
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPP 821
+ VS RD + +LV++P R A E+ HPF L L C VP
Sbjct: 257 PPPKLKNSHKVSPVLRDFLERMLVRDPQER----ATAQELLDHPFL--LQTGLPECLVP- 309
Query: 822 ELPRSCDAVIGSQKKESTKC 841
+I +K+++ C
Sbjct: 310 --------LIQLYRKQTSTC 321
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 78
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S++ + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
Query: 760 V 760
+
Sbjct: 236 I 236
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 30 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 82
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 180 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 239
Query: 760 V 760
+
Sbjct: 240 I 240
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L ++LG G V + +A K+++ L R + + E I ++L HP
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPN 91
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L + E F LV + GG+L ++SE A + ++L ++ ++H
Sbjct: 92 IVRLHDSISEEGFHYLVFDLVTGGEL--FEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 592 GVVYRDLKPENILVR---EDGHIMLSDFDLSL 620
+V+RDLKPEN+L+ + + L+DF L++
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAI 181
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 695 LVVEPTGARSN--SFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGN 752
L +E G + F GT YL+PE+++ + +G VD W G+ L+ LL G PF
Sbjct: 179 LAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQ 238
Query: 753 DETLSNVVSQSLRFPG--YPVVSFHARDLIRGLLVKEPDNRLGA 794
+ + + + FP + V+ A++LI +L P R+ A
Sbjct: 239 HKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITA 282
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAEL--IG--TSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K +LG G+ G+V L +G T L A+K + + G + Q E +I++
Sbjct: 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILK 79
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L F+ ++ + LVMEY P G L Q+ +R + + Y +++
Sbjct: 80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL-LYSSQICK 138
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL V+RDL NILV + H+ ++DF L+
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 174
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 26/123 (21%)
Query: 709 GTHEYLAPEIIKGEGHGSSV-----DWWTFGIFLFELLYGRTPFKG-SGND--------- 753
G+ EY+APE+++ +S+ D W+ G+ L+ LL G PF G G+D
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 754 ETLSNVVSQSLR-----FP--GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
N++ +S++ FP + +S A+DLI LLV++ RL AA++ QHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 807 FEG 809
+G
Sbjct: 299 VQG 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVR 606
LV E GG +L R F+E A V +V AL++LH G+ +RDLKPENIL
Sbjct: 88 LVFEKMRGGS--ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 607 EDGH---IMLSDFDL 618
+ + DFDL
Sbjct: 146 HPNQVSPVKICDFDL 160
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + L G+ R E +IM+ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNR---ELQIMRKLDHCNIVRL 78
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S++ + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
Query: 760 V 760
+
Sbjct: 236 I 236
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + L G+ R E +IM+ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNR---ELQIMRKLDHCNIVRL 78
Query: 536 FAHFTT------EKFSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + E + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S++ + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 176 GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
Query: 760 V 760
+
Sbjct: 236 I 236
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 26/123 (21%)
Query: 709 GTHEYLAPEIIKGEGHGSSV-----DWWTFGIFLFELLYGRTPFKG-SGND--------- 753
G+ EY+APE+++ +S+ D W+ G+ L+ LL G PF G G+D
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 754 ETLSNVVSQSLR-----FP--GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
N++ +S++ FP + +S A+DLI LLV++ RL AA++ QHP+
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 807 FEG 809
+G
Sbjct: 299 VQG 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVR 606
LV E GG +L R F+E A V +V AL++LH G+ +RDLKPENIL
Sbjct: 88 LVFEKMRGGS--ILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCE 145
Query: 607 EDGH---IMLSDFDLS 619
+ + DF L
Sbjct: 146 HPNQVSPVKICDFGLG 161
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+ +K+G G GTV+ AE G+ + +M+ DF R + E IM+ L HP
Sbjct: 39 LNIKEKIGAGSFGTVHRAEWHGSDVAVKI-LMEQDFHAER--VNEFLREVAIMKRLRHPN 95
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHM 590
+ T +V EY G L+ L K +R ++ R +A +V + YLH
Sbjct: 96 IVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN 155
Query: 591 LG--VVYRDLKPENILVREDGHIMLSDFDLS 619
+V+R+LK N+LV + + + DF LS
Sbjct: 156 RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
S S GT E++APE+++ E D ++FG+ L+EL + P+
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 5/148 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
F +++G G G V+ T + A+K++D ++ Q E ++ D +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIID--LEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ + + ++MEY GG L + P F E + E+L L+YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGP---FDEFQIATMLKEILKGLDYLHSE 139
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
++RD+K N+L+ E G + L+DF ++
Sbjct: 140 KKIHRDIKAANVLLSEQGDVKLADFGVA 167
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTP 746
T + N+FVGT ++APE+I+ + S D W+ GI EL G P
Sbjct: 173 TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 15/149 (10%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K +G G G VY A+L + L A+K + D K+ E +IM+ LDH + L
Sbjct: 26 KVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRF--KNRELQIMRKLDHCNIVRL 78
Query: 536 --FAHFTTEK----FSCLVMEYCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYL 588
F + + EK + LV++Y P V R + + + Y+ ++ +L Y+
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 589 HMLGVVYRDLKPENILVREDGHIM-LSDF 616
H G+ +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 701 GARSNSFVGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + S + + Y APE+I G + SS+D W+ G L ELL G+ F G + L +
Sbjct: 176 GEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235
Query: 760 V 760
+
Sbjct: 236 I 236
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIM--QMLDH 529
++L K +G G+ G L ++ L A+K ++ R + A +REI+ + L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIAANVKREIINHRSLRH 74
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + T +VMEY GG+L R RF SE ARF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGRF-SEDEARFFFQQLISGVSYCH 132
Query: 590 MLGVVYRDLKPENILV 605
+ V +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 690 SPMPQLVVEPTG--------ARSNSFVGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFEL 740
SP P+L + G ++ S VGT Y+APE++ K E G D W+ G+ L+ +
Sbjct: 151 SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 741 LYGRTPFKG----SGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK 796
L G PF+ +T+ +++ P Y +S R LI + V +P R+
Sbjct: 211 LVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRI---- 266
Query: 797 GAAEIKQHPFF 807
EI+ H +F
Sbjct: 267 SIPEIRNHEWF 277
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
+G + VGT ++APE++K E +G VD W G+ LF LL G PF G+ + +
Sbjct: 188 SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGI 246
Query: 760 VSQSLRFP--GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+ + + +S A+DL+R +L+ +P R+ E HP+ +
Sbjct: 247 IKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVY----EALNHPWLK 293
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 498 FALKVMDNDFLVGRKKMPRAQTERE--IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGG 555
FA+K++D + +RE I ML HP + L ++++ +V E+ G
Sbjct: 54 FAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGA 113
Query: 556 DL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
DL ++++ +SE A Y+ ++L AL Y H +++RD+KP +L+
Sbjct: 114 DLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 165
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
+G + VGT ++APE++K E +G VD W G+ LF LL G PF G+ + +
Sbjct: 186 SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGI 244
Query: 760 VSQSLRFP--GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+ + + +S A+DL+R +L+ +P R+ E HP+ +
Sbjct: 245 IKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVY----EALNHPWLK 291
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 498 FALKVMDNDFLVGRKKMPRAQTERE--IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGG 555
FA+K++D + +RE I ML HP + L ++++ +V E+ G
Sbjct: 52 FAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGA 111
Query: 556 DL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
DL ++++ +SE A Y+ ++L AL Y H +++RD+KP +L+
Sbjct: 112 DLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLL 163
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAEL--IG--TSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K +LG G+ G+V L +G T L A+K + + G + Q E +I++
Sbjct: 7 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILK 63
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L F+ ++ LVMEY P G L Q+ +R + + Y +++
Sbjct: 64 ALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLL-LYSSQICK 122
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL V+RDL NILV + H+ ++DF L+
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLA 158
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+ + +K+G G GTVY A + T A++ M+ L + K E +M+ +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 76
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + + +VMEY GG L + + E E L ALE+LH
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLH 133
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
V++RD+K +NIL+ DG + L+DF
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+ P ++ + VGT ++APE++ + +G VD W+ GI E++ G P+
Sbjct: 166 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+ + +K+G G GTVY A + T A++ M+ L + K E +M+ +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 76
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + + +VMEY GG L + + E E L ALE+LH
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLH 133
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
V++RD+K +NIL+ DG + L+DF
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+ P ++ + VGT ++APE++ + +G VD W+ GI E++ G P+
Sbjct: 166 ITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+ + +K+G G GTVY A + T A++ M+ L + K E +M+ +
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 76
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + + +VMEY GG L + + E E L ALE+LH
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLH 133
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
V++RD+K +NIL+ DG + L+DF
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDF 160
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+ P ++ ++ VGT ++APE++ + +G VD W+ GI E++ G P+
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+ + +K+G G GTVY A + T A++ M+ L + K E +M+ +
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 77
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + + +VMEY GG L + + E E L ALE+LH
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLH 134
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
V++RD+K +NIL+ DG + L+DF
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDF 161
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+ P ++ + VGT ++APE++ + +G VD W+ GI E++ G P+
Sbjct: 167 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIM--QMLDH 529
++L K +G G+ G L + L A+K ++ R + +REI+ + L H
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + T +VMEY GG+L R RF SE ARF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGRF-SEDEARFFFQQLISGVSYAH 132
Query: 590 MLGVVYRDLKPENILVREDG----HIMLSDFDLS 619
+ V +RDLK EN L+ DG + ++DF S
Sbjct: 133 AMQVAHRDLKLENTLL--DGSPAPRLKIADFGYS 164
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 672 LSVAAKSRKIKSDLAAQVSPMPQLVVEPTG--------ARSNSFVGTHEYLAPEII-KGE 722
+ VA + K+++ L SP P+L + G ++ S VGT Y+APE++ K E
Sbjct: 134 MQVAHRDLKLENTLLDG-SPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKE 192
Query: 723 GHGSSVDWWTFGIFLFELLYGRTPFKG----SGNDETLSNVVSQSLRFPGYPVVSFHARD 778
G D W+ G+ L+ +L G PF+ +T+ +++ P Y +S R
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 779 LIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
LI + V +P R+ EI+ H +F
Sbjct: 253 LISRIFVADPAKRI----SIPEIRNHEWF 277
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 4/153 (2%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQM 526
GM +F+ +K+G G G VY A T + ALK + D + +P A E +++
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKE 58
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L+HP + L TE LV E+ DL + Y+ ++L L
Sbjct: 59 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 117
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 284 ----HPFFQDVT 291
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 9/146 (6%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVM---DNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
K+G G G V+ T + A+K ++D ++ KK+ A E +++ L HP L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVI--KKI--ALREIRMLKQLKHPNLV 65
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L F ++ LV EYC LH L + Q R E + + L A+ + H
Sbjct: 66 NLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RD+KPENIL+ + I L DF +
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFA 149
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 34/133 (25%)
Query: 708 VGTHEYLAPEIIKGEG-HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL---------- 756
V T Y +PE++ G+ +G VD W G ELL G + G + + L
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDL 222
Query: 757 ----SNVVSQSLRFPG---------------YPVVSFHARDLIRGLLVKEPDNRLGAVKG 797
V S + F G +P +S+ A L++G L +P RL
Sbjct: 223 IPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERL----T 278
Query: 798 AAEIKQHPFFEGL 810
++ HP+FE +
Sbjct: 279 CEQLLHHPYFENI 291
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT---EREI 523
+ M+ KL + +G G+ G V L + G A+K + ND AQ E +
Sbjct: 9 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKND--------ATAQAFLAEASV 58
Query: 524 MQMLDHPFLPTLFAHFTTEKFSC-LVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEV 581
M L H L L EK +V EY G L LR + S + +F + +V
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DV 117
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
A+EYL V+RDL N+LV ED +SDF L+
Sbjct: 118 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPF 747
++ APE ++ + D W+FGI L+E+ +GR P+
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + EL
Sbjct: 157 VKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL 216
Query: 741 LYGRTPFKGSGNDETLSNVVSQ----SLRF---------------PGYPVVSF------- 774
+ G F+G+ + + + V+ Q S F P YP ++F
Sbjct: 217 VKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDW 276
Query: 775 --------------HARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
ARDL+ +LV +PD R+ E +HP+
Sbjct: 277 IFPSESERDKIKTSQARDLLSKMLVIDPDKRI----SVDEALRHPYI 319
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 12/165 (7%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
++ ++ K +G G G V A A+K + F + RA E +++ ++
Sbjct: 21 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVN 79
Query: 529 HPFLPTLFAHFTTEKF------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVL 582
H + +L FT +K LVME V+ + + + + ++L
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQML 134
Query: 583 LALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNPM 627
+++LH G+++RDLKP NI+V+ D + + DF L+ + N M
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFM 179
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 62
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKPEN+L+ +G I L+DF L+
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 113/312 (36%), Gaps = 99/312 (31%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV- 605
++ME GG+L Q++ + F+E+ A + ++ A+++LH + +RD+KPEN+L
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
Query: 606 --REDGHIMLSDFDLSLRCAVNPMXXXXXXXXXXXXXXXXXXXXXXXXXIEPFCLHPSWQ 663
+D + L+DF + N + Q
Sbjct: 144 SKEKDAVLKLTDFGFAKETTQNAL-----------------------------------Q 168
Query: 664 VSCFTPRLLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEG 723
C+TP V+P E L PE
Sbjct: 169 TPCYTPYY-----------------VAP--------------------EVLGPE-----K 186
Query: 724 HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF-------PGYPVVSFHA 776
+ S D W+ G+ ++ LL G PF S + +S + + +R P + VS A
Sbjct: 187 YDKSCDMWSLGVIMYILLCGFPPFY-SNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDA 245
Query: 777 RDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPRSCDAVIGSQKK 836
+ LIR LL +P RL + HP+ + V P+ P V+ K
Sbjct: 246 KQLIRLLLKTDPTERL----TITQFMNHPWIN-------QSMVVPQTPLHTARVLQEDKD 294
Query: 837 ESTKCEESKGAA 848
+ +E +A
Sbjct: 295 HWDEVKEEMTSA 306
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E ++M+ L+HP + +K + EY GG L + + S++ Q F
Sbjct: 57 EVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF-AK 115
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++ + YLH + +++RDL N LVRE+ +++++DF L+
Sbjct: 116 DIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLA 155
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELL 741
+P + + VG ++APE+I G + VD ++FGI L E++
Sbjct: 173 KPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 60
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKPEN+L+ +G I L+DF L+
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 15/163 (9%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
+R ++L KKLG G G V+ + T + A+K + + F + +T REIM + +
Sbjct: 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAF---QNSTDAQRTFREIMILTE 64
Query: 529 ---HPFLPTLFAHF--TTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVL 582
H + L ++ LV +Y DLH V+R + ++ V +++
Sbjct: 65 LSGHENIVNLLNVLRADNDRDVYLVFDYMET-DLHAVIR----ANILEPVHKQYVVYQLI 119
Query: 583 LALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCAVN 625
++YLH G+++RD+KP NIL+ + H+ ++DF LS R VN
Sbjct: 120 KVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLS-RSFVN 161
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 706 SFVGTHEYLAPEIIKGEG-HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSL 764
+V T Y APEI+ G + +D W+ G L E+L G+ F GS L ++ +
Sbjct: 189 DYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIG-VI 247
Query: 765 RFP 767
FP
Sbjct: 248 DFP 250
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT---EREI 523
+ M+ KL + +G G+ G V L + G A+K + ND AQ E +
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKND--------ATAQAFLAEASV 239
Query: 524 MQMLDHPFLPTLFAHFTTEKFSC-LVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEV 581
M L H L L EK +V EY G L LR + S + +F + +V
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DV 298
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
A+EYL V+RDL N+LV ED +SDF L+
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 674 VAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTF 733
+AA++ + D A+VS L E + + + ++ APE ++ + + D W+F
Sbjct: 315 LAARNVLVSEDNVAKVSDF-GLTKEASSTQDTGKLPV-KWTAPEALREKKFSTKSDVWSF 372
Query: 734 GIFLFELL-YGRTPF 747
GI L+E+ +GR P+
Sbjct: 373 GILLWEIYSFGRVPY 387
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMD---NDFLVGRKKMPRAQTEREIMQMLDHP 530
L ++G G GTVY + G + LKV+D F R ++ + R + +L
Sbjct: 40 LSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILL--- 96
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
F + T+ +V ++C G L+ Q ++F Q + ++YLH
Sbjct: 97 -----FMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDI-ARQTAQGMDYLHA 150
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RD+K NI + E + + DF L+
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLA 179
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 694 QLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGS---SVDWWTFGIFLFELLYGRTPFKGS 750
Q V +PTG+ ++APE+I+ + + D +++GI L+EL+ G P+
Sbjct: 189 QQVEQPTGSVL--------WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHI 240
Query: 751 GNDETLSNVVSQSLRFP 767
N + + +V + P
Sbjct: 241 NNRDQIIFMVGRGYASP 257
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT---EREI 523
+ M+ KL + +G G+ G V L + G A+K + ND AQ E +
Sbjct: 18 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKND--------ATAQAFLAEASV 67
Query: 524 MQMLDHPFLPTLFAHFTTEKFSC-LVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEV 581
M L H L L EK +V EY G L LR + S + +F + +V
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DV 126
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
A+EYL V+RDL N+LV ED +SDF L+
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
Score = 33.1 bits (74), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPF 747
++ APE ++ + + D W+FGI L+E+ +GR P+
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFS 570
R E +++ L H + L FT E FS ++ G DL+ + + Q S
Sbjct: 73 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA---LS 129
Query: 571 EQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++ +F V ++L L+Y+H G+++RDLKP N+ V ED + + DF L+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 705 NSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
+V T Y APEI+ H +VD W+ G + ELL G+ F GS + L +
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI---- 241
Query: 764 LRFPGYP-------VVSFHARDLIRGL 783
+ G P + S HAR I+ L
Sbjct: 242 MEVVGTPSPEVLAKISSEHARTYIQSL 268
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 61
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKPEN+L+ +G I L+DF L+
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 465 GCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREI 523
G M +F+ +K+G G G VY A T + ALK + D + +P A E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISL 58
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
++ L+HP + L TE LV E+ DL + Y+ ++L
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L + H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 16/158 (10%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT---EREI 523
+ M+ KL + +G G+ G V L + G A+K + ND AQ E +
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV--AVKCIKND--------ATAQAFLAEASV 52
Query: 524 MQMLDHPFLPTLFAHFTTEKFSC-LVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEV 581
M L H L L EK +V EY G L LR + S + +F + +V
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DV 111
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
A+EYL V+RDL N+LV ED +SDF L+
Sbjct: 112 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPF 747
++ APE ++ + + D W+FGI L+E+ +GR P+
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G G V A S +A+K + + +K+ +E ++ L+H ++ +A
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 538 HF-----------TTEKFSCLV--MEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ +K S L MEYC G L+ L + ++ R + ++L A
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF-RQILEA 128
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L Y+H G+++RDLKP NI + E ++ + DF L+
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 706 SFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFK-GSGNDETLSNVVSQS 763
S +GT Y+A E++ G GH +D ++ GI FE++Y PF G L + S S
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 764 LRFPGYPVVSFHA----RDLIRGLLVKEPDNRLGA 794
+ FP P + + +IR L+ +P+ R GA
Sbjct: 246 IEFP--PDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 60
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKPEN+L+ +G I L+DF L+
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 10/152 (6%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKK---MPRAQTEREIMQMLD 528
+K+ KLG G + TVYLAE + A+K + F+ R+K + R + E L
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI---FIPPREKEETLKRFEREVHNSSQLS 69
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
H + ++ + LVMEY G L + P S A + ++L +++
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP---LSVDTAINFTNQILDGIKH 126
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H + +V+RD+KP+NIL+ + + + DF ++
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA 158
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 698 EPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKG 749
E + ++N +GT +Y +PE KGE D ++ GI L+E+L G PF G
Sbjct: 163 ETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIM--QMLDH 529
++L K +G G+ G L ++ L A+K ++ R + +REI+ + L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + T +VMEY GG+L R RF SE ARF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGRF-SEDEARFFFQQLISGVSYCH 132
Query: 590 MLGVVYRDLKPENILV 605
+ V +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 690 SPMPQLVVEPTG--------ARSNSFVGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFEL 740
SP P+L + G ++ S VGT Y+APE++ K E G D W+ G+ L+ +
Sbjct: 151 SPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 741 LYGRTPFKG----SGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK 796
L G PF+ +T+ +++ P Y +S R LI + V +P R+
Sbjct: 211 LVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRI---- 266
Query: 797 GAAEIKQHPFF 807
EI+ H +F
Sbjct: 267 SIPEIRNHEWF 277
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIM--QMLDH 529
++L K +G G+ G L ++ L A+K ++ R + +REI+ + L H
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 74
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + T +VMEY GG+L R RF SE ARF+ +++ + Y H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGRF-SEDEARFFFQQLISGVSYCH 132
Query: 590 MLGVVYRDLKPENILV 605
+ V +RDLK EN L+
Sbjct: 133 AMQVCHRDLKLENTLL 148
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 17/131 (12%)
Query: 690 SPMPQLVVEPTGARSNSF--------VGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFEL 740
SP P+L + G +S VGT Y+APE++ K E G D W+ G+ L+ +
Sbjct: 151 SPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 210
Query: 741 LYGRTPFKG----SGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK 796
L G PF+ +T+ +++ P Y +S R LI + V +P R+
Sbjct: 211 LVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRI---- 266
Query: 797 GAAEIKQHPFF 807
EI+ H +F
Sbjct: 267 SIPEIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIM--QMLDH 529
++L K +G G+ G L ++ L A+K ++ R + +REI+ + L H
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE------RGEKIDENVKREIINHRSLRH 73
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + T +VMEY GG+L R RF SE ARF+ +++ + Y H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGEL-FERICNAGRF-SEDEARFFFQQLISGVSYCH 131
Query: 590 MLGVVYRDLKPENILV 605
+ V +RDLK EN L+
Sbjct: 132 AMQVCHRDLKLENTLL 147
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 690 SPMPQLVVEPTG--------ARSNSFVGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFEL 740
SP P+L + G ++ S VGT Y+APE++ K E G D W+ G+ L+ +
Sbjct: 150 SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVM 209
Query: 741 LYGRTPFKG----SGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK 796
L G PF+ +T+ +++ P Y +S R LI + V +P R+
Sbjct: 210 LVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRI---- 265
Query: 797 GAAEIKQHPFF 807
EI+ H +F
Sbjct: 266 SIPEIRNHEWF 276
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQMLDHPFLPTL 535
KLG G TVY + T L ALK + L + P A E +++ L H + TL
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIR---LEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQ--KQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
TEK LV EY L+Q + + ++ ++L L Y H V
Sbjct: 66 HDIIHTEKSLTLVFEYLDKD----LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKV 121
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDLKP+N+L+ E G + L+DF L+
Sbjct: 122 LHRDLKPQNLLINERGELKLADFGLA 147
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 54/141 (38%), Gaps = 34/141 (24%)
Query: 699 PTGARSNSFVGTHEYLAPEIIKGE-GHGSSVDWWTFGIFLFELLYGRTPFKGSGNDE--- 754
PT N V T Y P+I+ G + + +D W G +E+ GR F GS +E
Sbjct: 153 PTKTYDNEVV-TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLH 211
Query: 755 ----------------TLSNVVSQSLRFPGY---------PVVSFHARDLIRGLLVKEPD 789
LSN ++ +P Y P + DL+ LL E
Sbjct: 212 FIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGR 271
Query: 790 NRLGAVKGAAEIKQHPFFEGL 810
NR+ A + +HPFF L
Sbjct: 272 NRI----SAEDAMKHPFFLSL 288
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 10/136 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIM--QMLDH 529
+ K +G G+ G L T L A+K ++ R +REI+ + L H
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE------RGAAIDENVQREIINHRSLRH 75
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + T ++MEY GG+L+ R RF SE ARF+ ++L + Y H
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYE-RICNAGRF-SEDEARFFFQQLLSGVSYCH 133
Query: 590 MLGVVYRDLKPENILV 605
+ + +RDLK EN L+
Sbjct: 134 SMQICHRDLKLENTLL 149
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 17/131 (12%)
Query: 690 SPMPQLVVEPTG--------ARSNSFVGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFEL 740
SP P+L + G ++ S VGT Y+APE++ + E G D W+ G+ L+ +
Sbjct: 152 SPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVM 211
Query: 741 LYGRTPFKG----SGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVK 796
L G PF+ +T+ ++S P +S LI + V +P R+
Sbjct: 212 LVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRI---- 267
Query: 797 GAAEIKQHPFF 807
EIK H +F
Sbjct: 268 SIPEIKTHSWF 278
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 59
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKPEN+L+ +G I L+DF L+
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ ++VD W+ G + EL
Sbjct: 159 VKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGEL 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ----SLRF---------------PGYPVVSF------- 774
+ G F+G+ + + + V+ Q S F P YP + F
Sbjct: 219 VKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDW 278
Query: 775 --------------HARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
ARDL+ +LV +PD R+ E +HP+
Sbjct: 279 IFPSESERDKIKTSQARDLLSKMLVIDPDKRI----SVDEALRHPYI 321
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
++ ++ K +G G G V A A+K + F + RA E +++ ++
Sbjct: 23 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ-NQTHAKRAYRELVLLKCVN 81
Query: 529 HPFLPTLFAHFTTEKF------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVL 582
H + +L FT +K LVME V+ + + + + ++L
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-----LDHERMSYLLYQML 136
Query: 583 LALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNPM 627
+++LH G+++RDLKP NI+V+ D + + DF L+ N M
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFM 181
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 15/177 (8%)
Query: 465 GCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI- 523
G M ++ ++G G GTVY A + ALK + G T RE+
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 524 ----MQMLDHPFLPTLFAHFTTEKFS-----CLVMEYCPGGDLHVLRQKQPSRFFSEQAA 574
++ +HP + L T + LV E+ DL K P +
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETI 122
Query: 575 RFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL----SLRCAVNPM 627
+ + + L L++LH +V+RDLKPENILV G + L+DF L S + A+ P+
Sbjct: 123 KDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPV 179
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+H+ +KLG G V L E + +ALK + ++ AQ E ++ ++ +H
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI---LCHEQQDREEAQREADMHRLFNH 85
Query: 530 PFLPTLFAHFTTEKFS----CLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLL 583
P + L A+ E+ + L++ + G L + R K F +E + + +
Sbjct: 86 PNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICR 145
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDF 616
LE +H G +RDLKP NIL+ ++G +L D
Sbjct: 146 GLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL 178
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 710 THEYLAPEIIKGEGH---GSSVDWWTFGIFLFELLYGRTPFKGS-GNDETLSNVVSQSLR 765
T Y APE+ + H D W+ G L+ +++G P+ ++++ V L
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 766 FPGYPVVSFHARDLIRGLLVKEPDNR 791
P P S L+ ++ +P R
Sbjct: 266 IPQSPRHSSALWQLLNSMMTVDPHQR 291
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L + LG G + V+LA + A+KV+ D R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 532 LPTLFAHFTTEK----FSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALE 586
+ ++A E +VMEY G L ++ + P + + A +A+ AL
Sbjct: 74 IVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALN 130
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCA 623
+ H G+++RD+KP NI++ + + DF ++ A
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 20/129 (15%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
++ + +GT +YL+PE +G+ + D ++ G L+E+L G PF G ++ +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----DSPVSVAYQ 230
Query: 763 SLRFPGYPVVSFH---ARDL---IRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIR 816
+R P + H + DL + L K P+NR + AAE++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMRA-------DLVRVH 280
Query: 817 CAVPPELPR 825
PPE P+
Sbjct: 281 NGEPPEAPK 289
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 58
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 283 ----HPFFQDVT 290
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 6/147 (4%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
+ + +K+G G GTVY A + T A++ M+ L + K E +M+ +
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN---LQQQPKKELIINEILVMRENKN 77
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + + +VMEY GG L + + E E L ALE+LH
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLH 134
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
V++R++K +NIL+ DG + L+DF
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDF 161
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 697 VEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+ P ++ ++ VGT ++APE++ + +G VD W+ GI E++ G P+
Sbjct: 167 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 465 GCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREI 523
G M +F+ +K+G G G VY A T + ALK + D + +P A E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISL 58
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
++ L+HP + L TE LV E+ DL + Y+ ++L
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L + H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 4/156 (2%)
Query: 465 GCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREI 523
G M +F+ +K+G G G VY A T + ALK + D + +P A E +
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISL 58
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
++ L+HP + L TE LV E+ DL + Y+ ++L
Sbjct: 59 LKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L + H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 5/157 (3%)
Query: 465 GCMG-MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTERE 522
G +G M +F+ +K+G G G VY A T + ALK + D + +P A E
Sbjct: 1 GPLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREIS 58
Query: 523 IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVL 582
+++ L+HP + L TE LV E+ DL + Y+ ++L
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLL 117
Query: 583 LALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L + H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 QGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 61
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 66
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 32/129 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 171 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 800 EIKQHPFFE 808
HPFF+
Sbjct: 291 ----HPFFQ 295
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFS 570
R E +++ L H + L FT E FS ++ G DL+ + + Q S
Sbjct: 73 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LS 129
Query: 571 EQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++ +F V ++L L+Y+H G+++RDLKP N+ V ED + + DF L+
Sbjct: 130 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLA 178
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 705 NSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
+V T Y APEI+ H +VD W+ G + ELL G+ F GS + L +
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI---- 241
Query: 764 LRFPGYP-------VVSFHARDLIRGL 783
+ G P + S HAR I+ L
Sbjct: 242 MEVVGTPSPEVLAKISSEHARTYIQSL 268
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 62
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 61
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 18/175 (10%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI--- 523
M ++ ++G G GTVY A + ALK + G + +P T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLP-ISTVREVALL 57
Query: 524 --MQMLDHPFLPTLFAHFTTEKFS-----CLVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
++ +HP + L T + LV E+ DL K P + +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL----SLRCAVNPM 627
+ + L L++LH +V+RDLKPENILV G + L+DF L S + A++P+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPV 171
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 460 VQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLF-ALKVMDNDFLVGRKKMPRAQ 518
++K C + ++ ++G G G V+ A + F ALK + G + MP +
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLS- 57
Query: 519 TEREI-----MQMLDHPFLPTLFAHFTTEKFS-----CLVMEYCPGGDLHVLRQKQPSRF 568
T RE+ ++ +HP + LF T + LV E+ DL K P
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG 116
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L L++LH VV+RDLKP+NILV G I L+DF L+
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 31/132 (23%)
Query: 705 NSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSL 764
S V T Y APE++ + + VD W+ G E+ + F+GS + + L ++ +
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD-VI 235
Query: 765 RFPG---------YPVVSFHA-----------------RDLIRGLLVKEPDNRLGAVKGA 798
PG P +FH+ +DL+ L P R+ A
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 799 AEIKQHPFFEGL 810
+ HP+F+ L
Sbjct: 296 S----HPYFQDL 303
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 4/155 (2%)
Query: 466 CMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIM 524
+ M +F+ +K+G G G VY A T + ALK + D + +P A E ++
Sbjct: 3 LVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLL 60
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ L+HP + L TE LV E+ DL + Y+ ++L
Sbjct: 61 KELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L + H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 288 ----HPFFQDVT 295
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 66
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 32/129 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 171 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 230
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 231 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 800 EIKQHPFFE 808
HPFF+
Sbjct: 291 ----HPFFQ 295
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 59
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 62
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 59
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 284 ----HPFFQDVT 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 59
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 60
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 285 ----HPFFQDVT 292
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 61
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 60
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 59
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 60
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 59
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 59
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 164 VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 284 ----HPFFQDVT 291
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 59
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 284 ----HPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 58
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 283 ----HPFFQDVT 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 58
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + ALK + D + +P A E +++ L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKEL 58
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI--- 523
M ++ ++G G GTVY A + ALK + G + +P T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLP-ISTVREVALL 57
Query: 524 --MQMLDHPFLPTLFAHFTTEKFS-----CLVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
++ +HP + L T + LV E+ DL K P + +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + L L++LH +V+RDLKPENILV G + L+DF L+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M ++ +K+G G G VY A+ + ALK + D + +P A E +++ L
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLD--AEDEGIPSTAIREISLLKEL 76
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + +L +E+ LV E+ VL + + + + Y+ ++L + +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAH 134
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H +++RDLKP+N+L+ DG + L+DF L+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 33/133 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y AP+++ G + + +SVD W+ G E++ G+ F G +D+ L + S
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 762 ------QSLRFPGYPVVSFH-----------------ARDLIRGLLVKEPDNRLGAVKGA 798
Q P + +F DL+ +L +P+ R+ A
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI----SA 295
Query: 799 AEIKQHPFFEGLN 811
+ HP+F+ L+
Sbjct: 296 RDAMNHPYFKDLD 308
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDF-LVGRKKMPRAQTEREIMQMLDHP 530
+++ + +G G G V A T A+K + N F +V K R E +I++ H
Sbjct: 57 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK--RTLRELKILKHFKHD 114
Query: 531 FL--------PTL-FAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAE 580
+ PT+ + F + +ME DLH ++ QP + + R+++ +
Sbjct: 115 NIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQP---LTLEHVRYFLYQ 167
Query: 581 VLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNP 626
+L L+Y+H V++RDLKP N+LV E+ + + DF ++ +P
Sbjct: 168 LLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 213
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L + LG G + V+LA + A+KV+ D R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 532 LPTLF----AHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALE 586
+ ++ A +VMEY G L ++ + P + + A +A+ AL
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALN 130
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCA 623
+ H G+++RD+KP NIL+ + + DF ++ A
Sbjct: 131 FSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIA 167
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 20/129 (15%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
++ + +GT +YL+PE +G+ + D ++ G L+E+L G PF G ++ +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----DSPVSVAYQ 230
Query: 763 SLRFPGYPVVSFH---ARDL---IRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIR 816
+R P + H + DL + L K P+NR + AAE++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMRA-------DLVRVH 280
Query: 817 CAVPPELPR 825
PPE P+
Sbjct: 281 NGEPPEAPK 289
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 14/163 (8%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI--- 523
M ++ ++G G GTVY A + ALK + G + +P T RE+
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVP--NGEEGLP-ISTVREVALL 57
Query: 524 --MQMLDHPFLPTLFAHFTTEKFS-----CLVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
++ +HP + L T + LV E+ DL K P + +
Sbjct: 58 RRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKD 116
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + L L++LH +V+RDLKPENILV G + L+DF L+
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFS 570
R E +++ L H + L FT E FS ++ G DL+ + + Q S
Sbjct: 65 RTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA---LS 121
Query: 571 EQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++ +F V ++L L+Y+H G+++RDLKP N+ V ED + + DF L+
Sbjct: 122 DEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 170
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 705 NSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
+V T Y APEI+ H +VD W+ G + ELL G+ F GS + L +
Sbjct: 178 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI---- 233
Query: 764 LRFPGYP-------VVSFHARDLIRGL 783
+ G P + S HAR I+ L
Sbjct: 234 MEVVGTPSPEVLAKISSEHARTYIQSL 260
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M ++ +K+G G G VY A+ + ALK + D + +P A E +++ L
Sbjct: 20 MEKYQKLEKVGEGTYGVVYKAK-DSQGRIVALKRIRLD--AEDEGIPSTAIREISLLKEL 76
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
HP + +L +E+ LV E+ VL + + + + Y+ ++L + +
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTG--LQDSQIKIYLYQLLRGVAH 134
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H +++RDLKP+N+L+ DG + L+DF L+
Sbjct: 135 CHQHRILHRDLKPQNLLINSDGALKLADFGLA 166
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 33/133 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y AP+++ G + + +SVD W+ G E++ G+ F G +D+ L + S
Sbjct: 180 VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTP 239
Query: 762 ------QSLRFPGYPVVSFH-----------------ARDLIRGLLVKEPDNRLGAVKGA 798
Q P + +F DL+ +L +P+ R+ A
Sbjct: 240 NPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRI----SA 295
Query: 799 AEIKQHPFFEGLN 811
+ HP+F+ L+
Sbjct: 296 RDAMNHPYFKDLD 308
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 460 VQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLF-ALKVMDNDFLVGRKKMPRAQ 518
++K C + ++ ++G G G V+ A + F ALK + G + MP +
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLS- 57
Query: 519 TEREI-----MQMLDHPFLPTLFAHFTTEKFS-----CLVMEYCPGGDLHVLRQKQPSRF 568
T RE+ ++ +HP + LF T + LV E+ DL K P
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG 116
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L L++LH VV+RDLKP+NILV G I L+DF L+
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 52/132 (39%), Gaps = 31/132 (23%)
Query: 705 NSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSL 764
S V T Y APE++ + + VD W+ G E+ + F+GS + + L ++ +
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD-VI 235
Query: 765 RFPG---------YPVVSFHA-----------------RDLIRGLLVKEPDNRLGAVKGA 798
PG P +FH+ +DL+ L P R+ A
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 799 AEIKQHPFFEGL 810
+ HP+F+ L
Sbjct: 296 S----HPYFQDL 303
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKV-MDNDFLVGRKKMPRAQTERE---------I 523
+ K +G GD G V C L+V D V K + TER+ I
Sbjct: 53 IEKIIGSGDSGEV---------CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
M DHP + L T + + +V EY G L + +F Q + V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM-LRGVGA 162
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YL LG V+RDL N+LV + +SDF LS
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE I S+ D W+FG+ ++E+L YG P+ N + +S+ V + R P
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEGYRLP 274
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 49/188 (26%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT-EREIMQMLD 528
+ + L K LG G G V I + FALK + D PR + E +IM++LD
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD--------PRYKNRELDIMKVLD 58
Query: 529 HPFLPTLFAHFTT--------------------------------------EKFSCLVME 550
H + L +F T K+ ++ME
Sbjct: 59 HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118
Query: 551 YCPGGDLHVLRQ-KQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVR-ED 608
Y P VL+ + R Y+ ++ A+ ++H LG+ +RD+KP+N+LV +D
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKD 178
Query: 609 GHIMLSDF 616
+ L DF
Sbjct: 179 NTLKLCDF 186
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 32/126 (25%)
Query: 713 YLAPEIIKGEG-HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS--------QS 763
Y APE++ G + S+D W+ G EL+ G+ F G + + L ++ Q
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQM 266
Query: 764 LRF-PGYPVVSFH------------------ARDLIRGLLVKEPDNRLGAVKGAAEIKQH 804
+R P Y V F A DL+ +L EPD R+ + A H
Sbjct: 267 IRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA----H 322
Query: 805 PFFEGL 810
PFF+ L
Sbjct: 323 PFFDHL 328
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 20/115 (17%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGND-----ETLSN 758
+NSFVGT Y++PE ++G + D W+ G+ L E+ GR P GSG+ E L
Sbjct: 179 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI-GSGSGSMAIFELLDY 237
Query: 759 VVSQSLRFPGYP--VVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQ---HPFFE 808
+V++ P P V S +D + L+K P R A++KQ H F +
Sbjct: 238 IVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAER-------ADLKQLMVHAFIK 283
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 453 RWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRK 512
R +A +++ G + F+ +LG G+ G V+ + + A K++ + K
Sbjct: 8 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----K 63
Query: 513 KMPRAQTERE--IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFF 569
R Q RE ++ + P++ + F ++ + ME+ GG L VL K+ R
Sbjct: 64 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIP 121
Query: 570 SEQAARFYVAEVLLALEYLH-MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + +A V+ L YL +++RD+KP NILV G I L DF +S
Sbjct: 122 EQILGKVSIA-VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY+ S A+K + D + ++ E +M+ + HP L
Sbjct: 36 MKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 91
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E +V EY P G+L ++ + + ++ A+EYL
Sbjct: 92 QLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNF 151
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLS 177
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 84
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-------FSEQAARFYVAEVLLALEYL 588
F ++T+ +V ++C G L+ ++F + Q AR ++YL
Sbjct: 85 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR--------GMDYL 136
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H +++RDLK NI + ED + + DF L+
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 709 GTHEYLAPEIIKGEG---HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ N + + +V +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 80/171 (46%), Gaps = 15/171 (8%)
Query: 460 VQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLF-ALKVMDNDFLVGRKKMPRAQ 518
++K C + ++ ++G G G V+ A + F ALK + G + MP +
Sbjct: 1 MEKDGLCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQ--TGEEGMPLS- 57
Query: 519 TEREI-----MQMLDHPFLPTLFAHFTTEKFS-----CLVMEYCPGGDLHVLRQKQPSRF 568
T RE+ ++ +HP + LF T + LV E+ DL K P
Sbjct: 58 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPG 116
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L L++LH VV+RDLKP+NILV G I L+DF L+
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 31/130 (23%)
Query: 705 NSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSL 764
S V T Y APE++ + + VD W+ G E+ + F+GS + + L ++ +
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILD-VI 235
Query: 765 RFPG---------YPVVSFHA-----------------RDLIRGLLVKEPDNRLGAVKGA 798
PG P +FH+ +DL+ L P R+ A
Sbjct: 236 GLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 799 AEIKQHPFFE 808
+ HP+F+
Sbjct: 296 S----HPYFQ 301
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 26/123 (21%)
Query: 709 GTHEYLAPEII-----KGEGHGSSVDWWTFGIFLFELLYGRTPFKG-SGND--------- 753
G+ EY+APE++ + + D W+ G+ L+ +L G PF G G D
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 754 ETLSNVVSQSLR-----FP--GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPF 806
N + +S++ FP + +S A+DLI LLV++ RL AA++ QHP+
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRL----SAAQVLQHPW 298
Query: 807 FEG 809
+G
Sbjct: 299 VQG 301
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 5/88 (5%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
L F + LV E GG + QKQ + F+E+ A V +V AL++LH G+
Sbjct: 76 LIEFFEDDTRFYLVFEKLQGGSILAHIQKQ--KHFNEREASRVVRDVAAALDFLHTKGIA 133
Query: 595 YRDLKPENILVREDGH---IMLSDFDLS 619
+RDLKPENIL + + DFDL
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLG 161
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 63/156 (40%), Gaps = 20/156 (12%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKV-MDNDFLVGRKKMPRAQTERE---------I 523
+ K +G GD G V C L+V D V K + TER+ I
Sbjct: 53 IEKIIGSGDSGEV---------CYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASI 103
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
M DHP + L T + + +V EY G L + +F Q + V
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGM-LRGVGA 162
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YL LG V+RDL N+LV + +SDF LS
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLS 198
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE I S+ D W+FG+ ++E+L YG P+ N + +S+ V + R P
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISS-VEEGYRLP 274
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF------ 766
Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQYEFP 293
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPR 825
P + VS + LIR LL EP R+ E HP+ +++ P+ P
Sbjct: 294 NPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQTPL 342
Query: 826 SCDAVIGSQKK--ESTKCEESKGAADEHVEFE 855
V+ K+ E K E + A V++E
Sbjct: 343 HTSRVLKEDKERWEDVKEEMTSALATMRVDYE 374
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 134 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 193
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 194 KPENLLYTSKRPNAILKLTDFGFA 217
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF------ 766
Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQYEFP 287
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPR 825
P + VS + LIR LL EP R+ E HP+ +++ P+ P
Sbjct: 288 NPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQTPL 336
Query: 826 SCDAVIGSQKK--ESTKCEESKGAADEHVEFE 855
V+ K+ E K E + A V++E
Sbjct: 337 HTSRVLKEDKERWEDVKEEMTSALATMRVDYE 368
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 128 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 187
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFA 211
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 68/151 (45%), Gaps = 20/151 (13%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 72
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-------FSEQAARFYVAEVLLALEYL 588
F ++T+ +V ++C G L+ ++F + Q AR ++YL
Sbjct: 73 FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR--------GMDYL 124
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H +++RDLK NI + ED + + DF L+
Sbjct: 125 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 709 GTHEYLAPEIIKGEG---HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ N + + +V +
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 228
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L + LG G + V+LA + A+KV+ D R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 532 LPTLFAHFTTEK----FSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALE 586
+ ++ E +VMEY G L ++ + P + + A +A+ AL
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALN 130
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCA 623
+ H G+++RD+KP NI++ + + DF ++ A
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 20/129 (15%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
++ + +GT +YL+PE +G+ + D ++ G L+E+L G PF G D +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPD----SVAYQ 230
Query: 763 SLRFPGYPVVSFH---ARDL---IRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIR 816
+R P + H + DL + L K P+NR + AAE++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMRA-------DLVRVH 280
Query: 817 CAVPPELPR 825
PPE P+
Sbjct: 281 NGEPPEAPK 289
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L + LG G + V+LA + A+KV+ D R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 532 LPTLF----AHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALE 586
+ ++ A +VMEY G L ++ + P + + A +A+ AL
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALN 130
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCA 623
+ H G+++RD+KP NI++ + + DF ++ A
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 20/129 (15%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
++ + +GT +YL+PE +G+ + D ++ G L+E+L G PF G ++ +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----DSPVSVAYQ 230
Query: 763 SLRFPGYPVVSFH---ARDL---IRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIR 816
+R P + H + DL + L K P+NR + AAE++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMRA-------DLVRVH 280
Query: 817 CAVPPELPR 825
PPE P+
Sbjct: 281 NGEPPEAPK 289
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
FK +KLG G TVY T ALK + D G A E +M+ L H
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPST--AIREISLMKELKHE 63
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSE-------QAARFYVAEVLL 583
+ L+ TE LV E+ L++ SR +++ ++L
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDND----LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L + H +++RDLKP+N+L+ + G + L DF L+
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 40/143 (27%)
Query: 701 GARSNSF---VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
G N+F V T Y AP+++ G + +S+D W+ G L E++ G+ F G+ ++E L
Sbjct: 159 GIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL 218
Query: 757 SNVV------SQSL-----RFPGY-------------PVVSFHAR--------DLIRGLL 784
+ ++SL + P Y V+ H + D + GLL
Sbjct: 219 KLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLL 278
Query: 785 VKEPDNRLGAVKGAAEIKQHPFF 807
PD RL A + HP+F
Sbjct: 279 QLNPDMRLSAKQAL----HHPWF 297
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF------ 766
Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQYEFP 243
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPR 825
P + VS + LIR LL EP R+ E HP+ +++ P+ P
Sbjct: 244 NPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQTPL 292
Query: 826 SCDAVIGSQKK--ESTKCEESKGAADEHVEFE 855
V+ K+ E K E + A V++E
Sbjct: 293 HTSRVLKEDKERWEDVKEEMTSALATMRVDYE 324
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFA 167
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 9/93 (9%)
Query: 521 REIMQMLDHPFLPTLFAHFT-----TEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAAR 575
R+ + + HP + +F + +VMEY G L R K +E A
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK--RSKGQKLPVAEAIA- 186
Query: 576 FYVAEVLLALEYLHMLGVVYRDLKPENILVRED 608
Y+ E+L AL YLH +G+VY DLKPENI++ E+
Sbjct: 187 -YLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 12/143 (8%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQML---- 527
++L LG G GTV+ + A+KV+ + ++G + + T + +L
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG 92
Query: 528 ---DHPFLPTLFAHFTTEKFSCLVMEY-CPGGDLH-VLRQKQPSRFFSEQAARFYVAEVL 582
HP + L F T++ LV+E P DL + +K P E +R + +V+
Sbjct: 93 AGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP---LGEGPSRCFFGQVV 149
Query: 583 LALEYLHMLGVVYRDLKPENILV 605
A+++ H GVV+RD+K ENIL+
Sbjct: 150 AAIQHCHSRGVVHRDIKDENILI 172
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 705 NSFVGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I + + H W+ GI L++++ G PF E ++
Sbjct: 196 TDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF------ERDQEILEAE 249
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNR 791
L FP + VS LIR L +P +R
Sbjct: 250 LHFPAH--VSPDCCALIRRCLAPKPSSR 275
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 20/166 (12%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDF-LVGRKKMPRAQTEREIMQMLDHP 530
+++ + +G G G V A T A+K + N F +V K R E +I++ H
Sbjct: 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAK--RTLRELKILKHFKHD 113
Query: 531 FL--------PTL-FAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAE 580
+ PT+ + F + +ME DLH ++ QP + + R+++ +
Sbjct: 114 NIIAIKDILRPTVPYGEFKSVYVVLDLME----SDLHQIIHSSQP---LTLEHVRYFLYQ 166
Query: 581 VLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNP 626
+L L+Y+H V++RDLKP N+LV E+ + + DF ++ +P
Sbjct: 167 LLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 458 RCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-- 515
R V K + L +++G G+ G V+ L + L A+K R+ +P
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-------RETLPPD 154
Query: 516 ---RAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQ 572
+ E I++ HP + L T ++ +VME GGD + + +R +
Sbjct: 155 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKT 214
Query: 573 AARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ V + +EYL ++RDL N LV E + +SDF +S
Sbjct: 215 LLQM-VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
++ APE + + S D W+FGI L+E G +P+ N +T V + R P
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLP 335
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L + LG G + V+LA + A+KV+ D R + E + L+HP
Sbjct: 14 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 73
Query: 532 LPTLF----AHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALE 586
+ ++ A +VMEY G L ++ + P + + A +A+ AL
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALN 130
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCA 623
+ H G+++RD+KP NI++ + + DF ++ A
Sbjct: 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 167
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 20/129 (15%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
++ + +GT +YL+PE +G+ + D ++ G L+E+L G PF G ++ +V Q
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----DSPVSVAYQ 230
Query: 763 SLRFPGYPVVSFH---ARDL---IRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIR 816
+R P + H + DL + L K P+NR + AAE++ + +
Sbjct: 231 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMRA-------DLVRVH 280
Query: 817 CAVPPELPR 825
PPE P+
Sbjct: 281 NGEPPEAPK 289
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
FSE+ ++ V ++L L+Y+H GVV+RDLKP N+ V ED + + DF L+
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 191
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 36/138 (26%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
A +V T Y APE+I H +VD W+ G + E+L G+T FKG + L+ ++
Sbjct: 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255
Query: 761 SQSLRFPG------------------------------YPVVSFHARDLIRGLLVKEPDN 790
+ PG +P S A DL+ +L + D
Sbjct: 256 KVT-GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 314
Query: 791 RLGAVKGAAEIKQHPFFE 808
RL AA+ HPFFE
Sbjct: 315 RL----TAAQALTHPFFE 328
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF------ 766
Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQYEFP 243
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPR 825
P + VS + LIR LL EP R+ E HP+ +++ P+ P
Sbjct: 244 NPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQTPL 292
Query: 826 SCDAVIGSQKK--ESTKCEESKGAADEHVEFE 855
V+ K+ E K E + A V++E
Sbjct: 293 HTSRVLKEDKERWEDVKEEMTSALATMRVDYE 324
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFA 167
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
FSE+ ++ V ++L L+Y+H GVV+RDLKP N+ V ED + + DF L+
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLA 173
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 36/138 (26%)
Query: 702 ARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
A +V T Y APE+I H +VD W+ G + E+L G+T FKG + L+ ++
Sbjct: 178 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 237
Query: 761 SQSLRFPG------------------------------YPVVSFHARDLIRGLLVKEPDN 790
+ PG +P S A DL+ +L + D
Sbjct: 238 KVT-GVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 296
Query: 791 RLGAVKGAAEIKQHPFFE 808
RL AA+ HPFFE
Sbjct: 297 RL----TAAQALTHPFFE 310
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 20/151 (13%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 84
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-------FSEQAARFYVAEVLLALEYL 588
F ++T +V ++C G L+ ++F + Q AR ++YL
Sbjct: 85 FMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR--------GMDYL 136
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H +++RDLK NI + ED + + DF L+
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 709 GTHEYLAPEIIKGEG---HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ N + + +V +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 13/167 (7%)
Query: 458 RCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-- 515
R V K + L +++G G+ G V+ L + L A+K R+ +P
Sbjct: 102 RAVPKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSC-------RETLPPD 154
Query: 516 ---RAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQ 572
+ E I++ HP + L T ++ +VME GGD + + +R +
Sbjct: 155 LKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKT 214
Query: 573 AARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ V + +EYL ++RDL N LV E + +SDF +S
Sbjct: 215 LLQM-VGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
++ APE + + S D W+FGI L+E G +P+ N +T V + R P
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLP 335
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G G V A S +A+K + + +K+ +E ++ L+H ++ +A
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVMLLASLNHQYVVRYYA 69
Query: 538 HF-----------TTEKFSCLV--MEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ +K S L MEYC L+ L + ++ R + ++L A
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF-RQILEA 128
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L Y+H G+++RDLKP NI + E ++ + DF L+
Sbjct: 129 LSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 706 SFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFK-GSGNDETLSNVVSQS 763
S +GT Y+A E++ G GH +D ++ GI FE++Y PF G L + S S
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVS 245
Query: 764 LRFPGYPVVSFHA----RDLIRGLLVKEPDNRLGA 794
+ FP P + + +IR L+ +P+ R GA
Sbjct: 246 IEFP--PDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQMLDH 529
+F+ +K+G G G VY A T + ALK + D + +P A E +++ L+H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLD--TETEGVPSTAIREISLLKELNH 60
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L TE LV E+ DL + Y+ ++L L + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 283 ----HPFFQDVT 290
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%), Gaps = 33/168 (19%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT-EREIMQ-- 525
M F++ + G G GTV L + T A+K + D PR + E +IMQ
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD--------PRFRNRELQIMQDL 73
Query: 526 -MLDHPFLPTLFAHFTT-------EKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAA--- 574
+L HP + L ++F T + + +VMEY P R ++ Q A
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRN-----YYRRQVAPPP 128
Query: 575 ---RFYVAEVLLALEYLHM--LGVVYRDLKPENILVRE-DGHIMLSDF 616
+ ++ +++ ++ LH+ + V +RD+KP N+LV E DG + L DF
Sbjct: 129 ILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF 176
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 10/93 (10%)
Query: 706 SFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSL 764
+++ + Y APE+I G H ++VD W+ G E++ G F+G + L +V
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV---- 245
Query: 765 RFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKG 797
R G P +R+++R L D L KG
Sbjct: 246 RVLGCP-----SREVLRKLNPSHTDVDLYNSKG 273
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 471 HFKLHK-KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM--L 527
H+ H+ +LG G G V+ E T A+K + R ++ RA+ E+M L
Sbjct: 93 HWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAE---ELMACAGL 142
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
P + L+ + + ME GG L L ++Q E A +Y+ + L LEY
Sbjct: 143 TSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEY 200
Query: 588 LHMLGVVYRDLKPENILVREDG-HIMLSDF 616
LH +++ D+K +N+L+ DG H L DF
Sbjct: 201 LHSRRILHGDVKADNVLLSSDGSHAALCDF 230
Score = 29.3 bits (64), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 709 GTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
GT ++APE++ G + VD W+ + +L G P+
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + AL + D + +P A E +++ L
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLD--TETEGVPSTAIREISLLKEL 59
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 284 ----HPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIMQML 527
M +F+ +K+G G G VY A T + AL + D + +P A E +++ L
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLD--TETEGVPSTAIREISLLKEL 58
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
+HP + L TE LV E+ DL + Y+ ++L L +
Sbjct: 59 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 588 LHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
H V++RDLKP+N+L+ +G I L+DF L+
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 51/132 (38%), Gaps = 32/132 (24%)
Query: 708 VGTHEYLAPEIIKG-EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVS----- 761
V T Y APEI+ G + + ++VD W+ G E++ R F G + L +
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 762 QSLRFPG----------------------YPVVSFHARDLIRGLLVKEPDNRLGAVKGAA 799
+ +PG P + R L+ +L +P+ R+ A A
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 800 EIKQHPFFEGLN 811
HPFF+ +
Sbjct: 283 ----HPFFQDVT 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 471 HFKLHK-KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM--L 527
H+ H+ +LG G G V+ E T A+K + R ++ RA+ E+M L
Sbjct: 74 HWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKV-------RLEVFRAE---ELMACAGL 123
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEY 587
P + L+ + + ME GG L L ++Q E A +Y+ + L LEY
Sbjct: 124 TSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEY 181
Query: 588 LHMLGVVYRDLKPENILVREDG-HIMLSDF 616
LH +++ D+K +N+L+ DG H L DF
Sbjct: 182 LHSRRILHGDVKADNVLLSSDGSHAALCDF 211
Score = 29.3 bits (64), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 709 GTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
GT ++APE++ G + VD W+ + +L G P+
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 25/157 (15%)
Query: 465 GCMGMR-----HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT 519
G MGM+ F +K+G G+ G+V+ C++A+K R K P A +
Sbjct: 1 GAMGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---------RSKKPLAGS 51
Query: 520 E------REIMQ---MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH--VLRQKQPSRF 568
RE+ + H + F+ + + + EYC GG L + + +
Sbjct: 52 VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSY 111
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
F E + + +V L Y+H + +V+ D+KP NI +
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 148
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDL 618
+++RDLKP N+ V ED + + DF L
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGL 171
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L + LG G + V+LA + A+KV+ D R + E + L+HP
Sbjct: 31 YELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPA 90
Query: 532 LPTLFAHFTTEK----FSCLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALE 586
+ ++ E +VMEY G L ++ + P + + A +A+ AL
Sbjct: 91 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP---MTPKRAIEVIADACQALN 147
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCA 623
+ H G+++RD+KP NI++ + + DF ++ A
Sbjct: 148 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 184
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 13/106 (12%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
++ + +GT +YL+PE +G+ + D ++ G L+E+L G PF G ++ +V Q
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG----DSPVSVAYQ 247
Query: 763 SLRFPGYPVVSFH---ARDL---IRGLLVKEPDNRLGAVKGAAEIK 802
+R P + H + DL + L K P+NR + AAE++
Sbjct: 248 HVREDPIPPSARHEGLSADLDAVVLKALAKNPENRY---QTAAEMR 290
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 9/170 (5%)
Query: 453 RWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRK 512
R +A +++ G + F+ +LG G+ G V+ + + A K++ + K
Sbjct: 51 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----K 106
Query: 513 KMPRAQTERE--IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFS 570
R Q RE ++ + P++ + F ++ + ME+ GG L + +K R
Sbjct: 107 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPE 165
Query: 571 EQAARFYVAEVLLALEYL-HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + +A V+ L YL +++RD+KP NILV G I L DF +S
Sbjct: 166 QILGKVSIA-VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 222 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDFGLA 172
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D LRQ ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDFKQLRQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 477 KLGCGDIGTVY--LAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE--IMQMLDHPFL 532
+LGCG+ G+V + + A+KV+ G +K + RE IM LD+P++
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ----GTEKADTEEMMREAQIMHQLDNPYI 72
Query: 533 PTLFAHFTTEKFSCLVMEYCPGGDLHVL----RQKQPSRFFSEQAARFYVAEVLLALEYL 588
L E LVME GG LH R++ P +E + +V + ++YL
Sbjct: 73 VRLIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAE-----LLHQVSMGMKYL 126
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL N+L+ + +SDF LS
Sbjct: 127 EEKNFVHRDLAARNVLLVNRHYAKISDFGLS 157
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I S D W++G+ ++E L YG+ P+K E ++ +
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 226
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 38 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKT 97
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 98 LEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQMLXGIKHLHSAGIIHRDL 152
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 153 KPSNIVVKSDXTLKILDFGLA 173
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 63/167 (37%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 219 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 278
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ +V A QHP+
Sbjct: 279 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI-SVDDAL---QHPYI 321
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFA 537
LG G G V A S +A+K + + +K+ +E ++ L+H ++ +A
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRH----TEEKLSTILSEVXLLASLNHQYVVRYYA 69
Query: 538 HF-----------TTEKFSCLVM--EYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
+ +K S L + EYC L+ L + ++ R + ++L A
Sbjct: 70 AWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF-RQILEA 128
Query: 585 LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
L Y+H G+++R+LKP NI + E ++ + DF L+
Sbjct: 129 LSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 706 SFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFK-GSGNDETLSNVVSQS 763
S +GT Y+A E++ G GH +D ++ GI FE +Y PF G L + S S
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVS 245
Query: 764 LRFPGYPVVSFHA----RDLIRGLLVKEPDNRLGA 794
+ FP P + + +IR L+ +P+ R GA
Sbjct: 246 IEFP--PDFDDNKXKVEKKIIRLLIDHDPNKRPGA 278
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 59/117 (50%), Gaps = 4/117 (3%)
Query: 501 KVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVME-YCPGGDLHV 559
KV++ D + K+ + E I+ ++H + + F + F LVME + G DL
Sbjct: 61 KVLE-DCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFA 119
Query: 560 LRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDF 616
+ P E A + +++ A+ YL + +++RD+K ENI++ ED I L DF
Sbjct: 120 FIDRHPR--LDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G +F GT EY APE++ G + G ++ W+ G+ L+ L++ PF +ET+
Sbjct: 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF--CELEETVEAA 240
Query: 760 VSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+ P Y +VS L+ GLL P+ R
Sbjct: 241 IH-----PPY-LVSKELMSLVSGLLQPVPERR 266
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 88
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 145
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLA 174
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 297 KRITAAQALA----HAYF 310
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 269 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 323
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 324 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 382
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 383 NYVHRDLRAANILVGENLVCKVADFGLA 410
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ KE
Sbjct: 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKE 504
Query: 788 PDNR 791
P+ R
Sbjct: 505 PEER 508
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE--IMQMLDH 529
F+ +LG G+ G V + + + A K++ + K R Q RE ++ +
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEI----KPAIRNQIIRELQVLHECNS 73
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
P++ + F ++ + ME+ GG L VL K+ R E + +A VL L YL
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KEAKRIPEEILGKVSIA-VLRGLAYL 130
Query: 589 -HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RD+KP NILV G I L DF +S
Sbjct: 131 REKHQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+NSFVGT Y+APE ++G + D W+ G+ L EL GR P
Sbjct: 170 ANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 23/156 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH-- 529
++L +KLG G V+ A I + +K++ K + + + +REI ++L++
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKIL--------KPVKKNKIKREI-KILENLR 89
Query: 530 --PFLPTLFAHFTTEKFS---CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
P + TL A + S LV E+ D KQ + ++ RFY+ E+L A
Sbjct: 90 GGPNIITL-ADIVKDPVSRTPALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKA 143
Query: 585 LEYLHMLGVVYRDLKPENILV-REDGHIMLSDFDLS 619
L+Y H +G+++RD+KP N+++ E + L D+ L+
Sbjct: 144 LDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 17 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 73
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 74 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 132
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 133 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 168
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 76 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 135
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 136 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 190
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 191 KPSNIVVKSDCTLKILDFGLA 211
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 197 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 257 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 316
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 317 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 359
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 69
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 128
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 474 LHKKLGCGDIGTVYLAELI---GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
L++ LG G G VY G A+K D + K+ + +E IM+ LDHP
Sbjct: 28 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHP 85
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+ L E+ + ++ME P G+L H L + + S Y ++ A+ YL
Sbjct: 86 HIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLE 142
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ V+RD+ NILV + L DF LS
Sbjct: 143 SINCVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 66
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 125
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 15 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 71
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 72 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 130
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 131 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 166
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
++ ++ K +G G G V A A+K + F + RA E +M++++
Sbjct: 23 LKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQ-NQTHAKRAYRELVLMKVVN 81
Query: 529 HPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVL 582
H + L FT +K F +VME V++ + + + + ++L
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----LDHERMSYLLYQML 136
Query: 583 LALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G+ + E+
Sbjct: 159 VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ G F G+ + + + V+ Q
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 84
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 143
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 91
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 148
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 300 KRITAAQALA----HAYF 313
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 16 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 72
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 73 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 131
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 132 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 167
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF------ 766
Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + + +R
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFY-SNTGQAISPGMKRRIRLGQYGFP 253
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPR 825
P + VS A+ LIR LL +P RL + HP+ + V P+ P
Sbjct: 254 NPEWSEVSEDAKQLIRLLLKTDPTERL----TITQFMNHPWIN-------QSMVVPQTPL 302
Query: 826 SCDAVIGSQKKESTKCEESKGAA 848
V+ K + +E +A
Sbjct: 303 HTARVLQEDKDHWDEVKEEMTSA 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV- 605
++ME GG+L Q++ + F+E+ A + ++ A+++LH + +RD+KPEN+L
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
Query: 606 --REDGHIMLSDFDLSLRCAVNPM 627
+D + L+DF + N +
Sbjct: 163 SKEKDAVLKLTDFGFAKETTQNAL 186
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 92
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 149
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 301 KRITAAQALA----HAYF 314
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 38 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKT 97
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 98 LEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 153 KPSNIVVKSDXTLKILDFGLA 173
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 219 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 278
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 279 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 93
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 150
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLSLRCA 623
+++RDLKP N+ V ED + + DF L+ A
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 242 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 302 KRITAAQALA----HAYF 315
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 28 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 84
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 85 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 143
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 144 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 179
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 38 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 97
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 98 LEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQMLXGIKHLHSAGIIHRDL 152
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 153 KPSNIVVKSDXTLKILDFGLA 173
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 63/167 (37%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 219 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 278
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ +V A QHP+
Sbjct: 279 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI-SVDDAL---QHPYI 321
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 10/110 (9%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +++ + H + L FT ++ F+ LVM + G DL L + +
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEK---L 125
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
E +F V ++L L Y+H G+++RDLKP N+ V ED + + DF L+
Sbjct: 126 GEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 42/138 (30%)
Query: 708 VGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF 766
V T Y APE+I + +VD W+ G + E++ G+T FKGS + + L + ++
Sbjct: 186 VVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEI----MKV 241
Query: 767 PGYPVVSF-------HARDLIRGL--------------------------LVKEPDNRLG 793
G P F A++ ++GL LV + + R+
Sbjct: 242 TGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT 301
Query: 794 AVKGAAEIKQHPFFEGLN 811
A + A HP+FE L+
Sbjct: 302 AGEALA----HPYFESLH 315
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 9 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 65
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 66 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 124
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 125 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 160
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 97
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 154
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLA 183
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 186 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 246 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 305
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 306 KRITAAQALA----HAYF 319
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 8 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 64
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 65 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 123
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 124 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 159
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 58/120 (48%), Gaps = 19/120 (15%)
Query: 699 PTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGND-ETLS 757
P AR VGT Y++PE I G + VD ++ G+ LFELLY PF TL+
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLT 238
Query: 758 NVVSQSLRFP-----GYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNW 812
+V ++L+FP YP +D++ ++ P+ A I ++ FE L++
Sbjct: 239 DV--RNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPE--------AINIIENAVFEDLDF 288
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 25/159 (15%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM--LDHPFLPTL 535
LG G G V+ A+ C +A+K + + +++ R + RE+ + L+HP +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIR----LPNRELAREKVMREVKALAKLEHPGIVRY 68
Query: 536 FAHF----TTEK--------FSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
F + TTEK + + M+ C +L + R E+ R + L
Sbjct: 69 FNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENL---KDWMNGRCTIEERERSVCLHIFL 125
Query: 584 ----ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
A+E+LH G+++RDLKP NI D + + DF L
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 474 LHKKLGCGDIGTVYLAELI---GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
L++ LG G G VY G A+K D + K+ + +E IM+ LDHP
Sbjct: 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHP 73
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+ L E+ + ++ME P G+L H L + + S Y ++ A+ YL
Sbjct: 74 HIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLE 130
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ V+RD+ NILV + L DF LS
Sbjct: 131 SINCVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K ++F Q +
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LR 142
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 143 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 182
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 258
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 66
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 125
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 97
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 156
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 157 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 192
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 93
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 150
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLSLRCA 623
+++RDLKP N+ V ED + + DF L+ A
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 242 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 302 KRITAAQALA----HAYF 315
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M++++H + L FT +K F +VME V++ +
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----L 123
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L+ +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ G F G+ + + + V+ Q
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 14/110 (12%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
+N FVGT Y++PE ++G + D W+ G+ L E+ GR P E L +V++
Sbjct: 163 ANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFELLDYIVNEP 222
Query: 764 LRFPGYP--VVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQ---HPFFE 808
P P V S +D + L+K P R A++KQ H F +
Sbjct: 223 P--PKLPSAVFSLEFQDFVNKCLIKNPAER-------ADLKQLMVHAFIK 263
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE--IMQMLDH 529
F+ +LG G+ G V+ + + A K++ + K R Q RE ++ +
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNS 66
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEVLLALEYL 588
P++ + F ++ + ME+ GG L VL K+ R + + +A V+ L YL
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIA-VIKGLTYL 123
Query: 589 -HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RD+KP NILV G I L DF +S
Sbjct: 124 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 66
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 125
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 126 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 161
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 68/150 (45%), Gaps = 9/150 (6%)
Query: 474 LHKKLGCGDIGTVYLAELI---GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
L++ LG G G VY G A+K D + K+ + +E IM+ LDHP
Sbjct: 12 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKE--KFMSEAVIMKNLDHP 69
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+ L E+ + ++ME P G+L H L + + S Y ++ A+ YL
Sbjct: 70 HIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNS--LKVLTLVLYSLQICKAMAYLE 126
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ V+RD+ NILV + L DF LS
Sbjct: 127 SINCVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 93
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 150
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLSLRCA 623
+++RDLKP N+ V ED + + DF L+ A
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTA 183
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 182 TADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 242 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 302 KRITAAQALA----HAYF 315
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M++++H + L FT +K F +VME V++ +
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----L 123
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L+ +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G+ + E+
Sbjct: 159 VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ G F G+ + + + V+ Q
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 38 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKT 97
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 98 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 153 KPSNIVVKSDXTLKILDFGLA 173
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 219 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 278
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 279 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 91
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 148
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLA 177
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 300 KRITAAQALA----HAYF 313
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 23/161 (14%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKV--MDNDFLVGRKKMPR-AQTEREIMQ 525
M+ ++ +K+G G GTV+ A+ T + ALK +D+D + +P A E +++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD----DEGVPSSALREICLLK 56
Query: 526 MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSE-------QAARFYV 578
L H + L ++K LV E+C + ++F + + ++
Sbjct: 57 ELKHKNIVRLHDVLHSDKKLTLVFEFC---------DQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 579 AEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++L L + H V++RDLKP+N+L+ +G + L+DF L+
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 14 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 70
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 71 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 129
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 130 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 165
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 26/173 (15%)
Query: 464 HGC-MGMRHFKLHKKLGCGDIGTVYLAELIGTSC--LFALKVMDNDFLVGRKKMPRAQTE 520
HG +G R+ L K LGCG G V+ A + C A+K + L + + A E
Sbjct: 5 HGFDLGSRYMDL-KPLGCGGNGLVFSA--VDNDCDKRVAIKKI---VLTDPQSVKHALRE 58
Query: 521 REIMQMLDHPFLPTLF-------AHFT------TEKFSCLVMEYCPGGDLHVLRQKQPSR 567
+I++ LDH + +F + T TE S +++ DL + ++ P
Sbjct: 59 IKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP-- 116
Query: 568 FFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVR-EDGHIMLSDFDLS 619
E+ AR ++ ++L L+Y+H V++RDLKP N+ + ED + + DF L+
Sbjct: 117 -LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 31 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 90
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 91 LEEFQDVYLVMELMDANLXQVIQME-----LDHERMSYLLYQMLXGIKHLHSAGIIHRDL 145
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 146 KPSNIVVKSDXTLKILDFGLA 166
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 152 VKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 212 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 271
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 272 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 314
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K ++F Q +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LR 125
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 241
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
L + +G G G VY A IG D D + + + + E ++ ML HP
Sbjct: 9 LTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDIS-QTIENVRQEAKLFAMLKHPN 67
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQ-PSRFFSEQAARFYVAEVLLALEYLH 589
+ L E CLVME+ GG L+ VL K+ P A ++ + YLH
Sbjct: 68 IIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWA-----VQIARGMNYLH 122
Query: 590 ---MLGVVYRDLKPENILVR---EDGH-----IMLSDFDLS 619
++ +++RDLK NIL+ E+G + ++DF L+
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%)
Query: 706 SFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLR 765
S G + ++APE+I+ D W++G+ L+ELL G PF+G V L
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA 232
Query: 766 FP 767
P
Sbjct: 233 LP 234
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 76 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 135
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 136 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 190
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 191 KPSNIVVKSDCTLKILDFGLA 211
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 197 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 256
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 257 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 316
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 317 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 359
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 16/152 (10%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM------LDHP 530
++G G G V+ T + A+K M R+ + + +R +M + D P
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQM-------RRSGNKEENKRILMDLDVVLKSHDCP 84
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL-H 589
++ F F T + ME G L+++ + VA ++ AL YL
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVA-IVKALYYLKE 142
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLSLR 621
GV++RD+KP NIL+ E G I L DF +S R
Sbjct: 143 KHGVIHRDVKPSNILLDERGQIKLCDFGISGR 174
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 709 GTHEYLAPEIIK-----GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGND-ETLSNVVSQ 762
G Y+APE I + D W+ GI L EL G+ P+K D E L+ V+ +
Sbjct: 186 GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQE 245
Query: 763 S-LRFPGYPVVSFHARDLIRGLLVKEPDNR 791
PG+ S + ++ L K+ R
Sbjct: 246 EPPLLPGHMGFSGDFQSFVKDCLTKDHRKR 275
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 98
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 155
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 247 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 307 KRITAAQALA----HAYF 320
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 37 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 96
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 97 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 151
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 152 KPSNIVVKSDCTLKILDFGLA 172
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 158 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 217
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 218 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 277
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 278 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 320
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTE-REIMQMLDH 529
+F++ KK+GCG+ G + L + + T+ A+K+ + + P+ E R Q+
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPM-----KSRAPQLHLEYRFYKQLGSG 64
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+P ++ K++ +V+E G L L R FS + +++ +EY+H
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFD-LCDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 590 MLGVVYRDLKPENILVREDGH-----IMLSDFDLS 619
++YRD+KPEN L+ G+ I + DF L+
Sbjct: 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+L+
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 98
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 155
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 247 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 307 KRITAAQALA----HAYF 320
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 38 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 97
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 98 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 153 KPSNIVVKSDCTLKILDFGLA 173
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 219 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 278
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 279 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 98
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 99 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 155
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLA 184
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 187 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 246
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 247 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 306
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 307 KRITAAQALA----HAYF 320
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 88
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 145
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 297 KRITAAQALA----HAYF 310
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF------ 766
Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQYEFP 241
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPR 825
P + VS + LIR LL EP R+ E HP+ +++ P+ P
Sbjct: 242 NPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQTPL 290
Query: 826 SCDAVIGSQKKESTKCEESKGAA 848
V+ K+ +E +A
Sbjct: 291 HTSRVLKEDKERWEDVKEEMTSA 313
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 82 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 141
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFA 165
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF------ 766
Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQYEFP 241
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPR 825
P + VS + LIR LL EP R+ E HP+ +++ P+ P
Sbjct: 242 NPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQTPL 290
Query: 826 SCDAVIGSQKKESTKCEESKGAA 848
V+ K+ +E +A
Sbjct: 291 HTSRVLKEDKERWEDVKEEMTSA 313
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 82 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 141
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGFA 165
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 105
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 162
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 194 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 254 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 313
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 314 KRITAAQALA----HAYF 327
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 39 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 98
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 99 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 153
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 154 KPSNIVVKSDCTLKILDFGLA 174
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 160 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 220 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 279
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 280 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 322
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K ++F Q +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LR 154
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 155 GIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVR 606
+VMEYC G + + P + F A Y +++ LEYLH G+V++D+KP N+L+
Sbjct: 85 MVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT 143
Query: 607 EDGHIMLSDFDLS 619
G + +S ++
Sbjct: 144 TGGTLKISALGVA 156
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 12/103 (11%)
Query: 709 GTHEYLAPEIIKG--EGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF 766
G+ + PEI G G VD W+ G+ L+ + G PF+G + N+ S
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232
Query: 767 PG--YPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
PG P +S DL++G+L EP R +I+QH +F
Sbjct: 233 PGDCGPPLS----DLLKGMLEYEPAKRF----SIRQIRQHSWF 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 72
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E +++E+ G+L ++ + S + ++ A+EYL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 39 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 98
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 99 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 153
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 154 KPSNIVVKSDCTLKILDFGLA 174
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 160 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 220 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 279
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 280 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 322
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K ++F Q +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LR 154
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 109
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 166
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 34/131 (25%)
Query: 707 FVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------------- 752
+V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Query: 753 --DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPDNRLGAVK 796
E L + S+S R P ++F A DL+ +LV + D R+ A +
Sbjct: 265 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 324
Query: 797 GAAEIKQHPFF 807
A H +F
Sbjct: 325 ALA----HAYF 331
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 97
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 98 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 154
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLA 183
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 186 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 245
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 246 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 305
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 306 KRITAAQALA----HAYF 319
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 19/146 (13%)
Query: 710 THEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF--- 766
T Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 186 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQY 244
Query: 767 ----PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPE 822
P + VS + LIR LL EP R+ E HP+ +++ P+
Sbjct: 245 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQ 293
Query: 823 LPRSCDAVIGSQKKESTKCEESKGAA 848
P V+ K+ +E +A
Sbjct: 294 TPLHTSRVLKEDKERWEDVKEEMTSA 319
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 88 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 147
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 148 KPENLLYTSKRPNAILKLTDFGFA 171
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF------ 766
Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQYEFP 242
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPR 825
P + VS + LIR LL EP R+ E HP+ +++ P+ P
Sbjct: 243 NPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQTPL 291
Query: 826 SCDAVIGSQKKESTKCEESKGAA 848
V+ K+ +E +A
Sbjct: 292 HTSRVLKEDKERWEDVKEEMTSA 314
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 83 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 142
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 143 KPENLLYTSKRPNAILKLTDFGFA 166
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 19/146 (13%)
Query: 710 THEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF--- 766
T Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 187 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQY 245
Query: 767 ----PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPE 822
P + VS + LIR LL EP R+ E HP+ +++ P+
Sbjct: 246 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQ 294
Query: 823 LPRSCDAVIGSQKKESTKCEESKGAA 848
P V+ K+ +E +A
Sbjct: 295 TPLHTSRVLKEDKERWEDVKEEMTSA 320
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 89 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 148
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 149 KPENLLYTSKRPNAILKLTDFGFA 172
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 106
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 163
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 195 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 255 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 315 KRITAAQALA----HAYF 328
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 84
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 85 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 141
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLA 170
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 173 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 232
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 233 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 292
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 293 KRITAAQALA----HAYF 306
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 34/130 (26%)
Query: 708 VGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN-------------- 752
V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 753 -DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPDNRLGAVKG 797
E L + S+S R P ++F A DL+ +LV + D R+ A +
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 302
Query: 798 AAEIKQHPFF 807
A H +F
Sbjct: 303 LA----HAYF 308
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K ++F Q +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LR 154
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K ++F Q +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LR 154
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 546 CLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALEYLHML---GVVYRDLKPE 601
CLVMEY GG L+ VL +P +++ A + + + YLH + +++RDLKP
Sbjct: 76 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 135
Query: 602 NILVREDGHIM-LSDF 616
N+L+ G ++ + DF
Sbjct: 136 NLLLVAGGTVLKICDF 151
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 709 GTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGN 752
G+ ++APE+ +G + D +++GI L+E++ R PF G
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG 209
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 91
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 148
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 300 KRITAAQALA----HAYF 313
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 92
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 149
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 301 KRITAAQALA----HAYF 314
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 85
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 86 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 142
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLA 171
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 174 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 233
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 234 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 293
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 294 KRITAAQALA----HAYF 307
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K ++F Q +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LR 154
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 93
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 94 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 150
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLA 179
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 182 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 241
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 242 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 301
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 302 KRITAAQALA----HAYF 315
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 38 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 97
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 98 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 152
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 153 KPSNIVVKSDCTLKILDFGLA 173
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 219 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 278
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 279 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 321
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 88
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 145
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 297 KRITAAQALA----HAYF 310
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K ++F Q +
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LR 152
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 153 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 192
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 268
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 70
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E +++E+ G+L ++ + S + ++ A+EYL
Sbjct: 71 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 88
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 89 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 145
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLA 174
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 177 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 236
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 237 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 296
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 297 KRITAAQALA----HAYF 310
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 83
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 140
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 172 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 232 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 291
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 292 KRITAAQALA----HAYF 305
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 19/146 (13%)
Query: 710 THEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF--- 766
T Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 188 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQY 246
Query: 767 ----PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPE 822
P + VS + LIR LL EP R+ E HP+ +++ P+
Sbjct: 247 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQ 295
Query: 823 LPRSCDAVIGSQKKESTKCEESKGAA 848
P V+ K+ +E +A
Sbjct: 296 TPLHTSRVLKEDKERWEDVKEEMTSA 321
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 90 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 149
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 150 KPENLLYTSKRPNAILKLTDFGFA 173
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 92
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 149
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 301 KRITAAQALA----HAYF 314
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 32 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 91
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 92 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 146
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 147 KPSNIVVKSDCTLKILDFGLA 167
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 153 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 213 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 272
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 273 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 315
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 32 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 91
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 92 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 146
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 147 KPSNIVVKSDCTLKILDFGLA 167
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 153 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 212
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 213 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 272
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 273 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 315
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 82
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 139
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 291 KRITAAQALA----HAYF 304
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 72
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E +++E+ G+L ++ + S + ++ A+EYL
Sbjct: 73 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 109
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 110 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 166
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLA 195
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 198 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 257
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 258 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 317
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 318 KRITAAQALA----HAYF 331
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 15 MKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 70
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + S + ++ A+EYL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 19/141 (13%)
Query: 493 GTSCLFALKVMDNDFLVGRKKMP--------RAQTEREIMQMLDHPFLPTLFAHFTTEKF 544
G C V+D + + + P RA E +M+ ++H + +L FT +K
Sbjct: 31 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT 90
Query: 545 ------SCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
LVME V++ + + + + ++L +++LH G+++RDL
Sbjct: 91 LEEFQDVYLVMELMDANLCQVIQME-----LDHERMSYLLYQMLCGIKHLHSAGIIHRDL 145
Query: 599 KPENILVREDGHIMLSDFDLS 619
KP NI+V+ D + + DF L+
Sbjct: 146 KPSNIVVKSDCTLKILDFGLA 166
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 44/167 (26%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 152 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 211
Query: 741 LYGRTPFKGSGNDETLSNVVSQ---------------------------SLRFPG----- 768
+ + F G + + V+ Q L FP
Sbjct: 212 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDS 271
Query: 769 -YPVVSFH-------ARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFF 807
+P S H ARDL+ +LV +P R+ + QHP+
Sbjct: 272 LFPADSEHNKLKASQARDLLSKMLVIDPAKRI----SVDDALQHPYI 314
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 83
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 84 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 140
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLA 169
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 172 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 231
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 232 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 291
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 292 KRITAAQALA----HAYF 305
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 11/171 (6%)
Query: 453 RWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRK 512
R +A +++ G + F+ +LG G+ G V+ + + A K++ + K
Sbjct: 16 RLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----K 71
Query: 513 KMPRAQTERE--IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFF 569
R Q RE ++ + P++ + F ++ + ME+ GG L VL K+ R
Sbjct: 72 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIP 129
Query: 570 SEQAARFYVAEVLLALEYL-HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + +A V+ L YL +++RD+KP NILV G I L DF +S
Sbjct: 130 EQILGKVSIA-VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 187 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 546 CLVMEYCPGGDLH-VLRQKQPSRFFSEQAARFYVAEVLLALEYLHML---GVVYRDLKPE 601
CLVMEY GG L+ VL +P +++ A + + + YLH + +++RDLKP
Sbjct: 75 CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPP 134
Query: 602 NILVREDGHIM-LSDF 616
N+L+ G ++ + DF
Sbjct: 135 NLLLVAGGTVLKICDF 150
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 26/44 (59%)
Query: 709 GTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGN 752
G+ ++APE+ +G + D +++GI L+E++ R PF G
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGG 208
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 788 PDNR 791
P+ R
Sbjct: 422 PEER 425
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 91
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 92 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 148
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 180 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 239
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 240 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 299
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 300 KRITAAQALA----HAYF 313
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 224 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 279
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + S + ++ A+EYL
Sbjct: 280 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 339
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++R+L N LV E+ + ++DF LS
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLS 365
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 13 RHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 69
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+ME+ P G L QK R + + Y +++
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQ-YTSQICK 128
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 75/149 (50%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V + + + A+K + F ++ K+ R E +++ + H + L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 115
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 116 LDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 172
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLA 201
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 56/142 (39%), Gaps = 42/142 (29%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGS-SVDWWTFGIFLFELLYGRTPFKGSGNDETLSN 758
T +V T Y APEI+ H + +VD W+ G + ELL GRT F G+ + N
Sbjct: 204 TDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDH----IN 259
Query: 759 VVSQSLRFPGYPVVSFHAR---------------------------------DLIRGLLV 785
+ Q +R G P S +R DL+ +LV
Sbjct: 260 QLQQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLV 319
Query: 786 KEPDNRLGAVKGAAEIKQHPFF 807
+ D R+ A + A HP+F
Sbjct: 320 LDTDKRITASEALA----HPYF 337
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 84 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFA 167
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 63/156 (40%), Gaps = 19/156 (12%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
T R N+ + ++ + GE + S D W+ G+ ++ LL G PF S + +S
Sbjct: 151 TSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPG 209
Query: 760 VSQSLRF-------PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNW 812
+ +R P + VS + LIR LL EP R+ E HP+
Sbjct: 210 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW------ 259
Query: 813 ALIRCAVPPELPRSCDAVIGSQKKESTKCEESKGAA 848
+++ P+ P V+ K+ +E +A
Sbjct: 260 -IMQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSA 294
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 19/146 (13%)
Query: 710 THEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF--- 766
T Y+APE++ E + S D W+ G+ ++ LL G PF S + +S + +R
Sbjct: 196 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFY-SNHGLAISPGMKTRIRMGQY 254
Query: 767 ----PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPE 822
P + VS + LIR LL EP R+ E HP+ +++ P+
Sbjct: 255 EFPNPEWSEVSEEVKMLIRNLLKTEPTQRM----TITEFMNHPW-------IMQSTKVPQ 303
Query: 823 LPRSCDAVIGSQKKESTKCEESKGAA 848
P V+ K+ +E +A
Sbjct: 304 TPLHTSRVLKEDKERWEDVKEEMTSA 329
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +VME GG+L Q + + F+E+ A + + A++YLH + + +RD+
Sbjct: 98 YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 157
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 158 KPENLLYTSKRPNAILKLTDFGFA 181
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTE-REIMQMLDH 529
+F++ KK+GCG+ G + L + + T+ A+K+ + + P+ E R Q+
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPM-----KSRAPQLHLEYRFYKQLGSG 64
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+P ++ K++ +V+E G L L R FS + +++ +EY+H
Sbjct: 65 DGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFD-LCDRTFSLKTVLMIAIQLISRMEYVH 122
Query: 590 MLGVVYRDLKPENILVREDGH-----IMLSDFDLS 619
++YRD+KPEN L+ G+ I + DF L+
Sbjct: 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 788 PDNR 791
P+ R
Sbjct: 422 PEER 425
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K +F Q +
Sbjct: 73 EASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGM-LR 131
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 132 GISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 171
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE I S+ D W++GI ++E++ YG P+ N + + V + R P
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVI-KAVEEGYRLP 247
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 106
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 163
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 34/130 (26%)
Query: 708 VGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN-------------- 752
V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 753 -DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPDNRLGAVKG 797
E L + S+S R P ++F A DL+ +LV + D R+ A +
Sbjct: 263 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 322
Query: 798 AAEIKQHPFF 807
A H +F
Sbjct: 323 LA----HAYF 328
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 13/155 (8%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTE-REIMQMLDH 529
+F++ KK+GCG+ G + L + + T+ A+K+ + + P+ E R Q+
Sbjct: 31 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPM-----KSRAPQLHLEYRFYKQLGSG 85
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+P ++ K++ +V+E G L L R FS + +++ +EY+H
Sbjct: 86 DGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFD-LCDRTFSLKTVLMIAIQLISRMEYVH 143
Query: 590 MLGVVYRDLKPENILVREDGH-----IMLSDFDLS 619
++YRD+KPEN L+ G+ I + DF L+
Sbjct: 144 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 105
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 106 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 162
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLA 191
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 194 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 253
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 254 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 313
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 314 KRITAAQALA----HAYF 327
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 109 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 164 DHEHRKLRLIDWGLA 178
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 77
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + S + ++ A+EYL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 477 KLGCGDIGTVY--LAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE--IMQMLDHPFL 532
+LGCG+ G+V + + A+KV+ G +K + RE IM LD+P++
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ----GTEKADTEEMMREAQIMHQLDNPYI 398
Query: 533 PTLFAHFTTEKFSCLVMEYCPGGDLHVL----RQKQPSRFFSEQAARFYVAEVLLALEYL 588
L E LVME GG LH R++ P +E + +V + ++YL
Sbjct: 399 VRLIGVCQAEALM-LVMEMAGGGPLHKFLVGKREEIPVSNVAE-----LLHQVSMGMKYL 452
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
V+R+L N+L+ + +SDF LS
Sbjct: 453 EEKNFVHRNLAARNVLLVNRHYAKISDFGLS 483
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I S D W++G+ ++E L YG+ P+K E ++ +
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI 552
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 109 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 164 DHEHRKLRLIDWGLA 178
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 106
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 107 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 163
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLA 192
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 195 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 254
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 255 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 314
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 315 KRITAAQALA----HAYF 328
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 10 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 64
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 65 LVQLYAVVSEEPIX-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 123
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 124 NYVHRDLRAANILVGENLVCKVADFGLA 151
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ KE
Sbjct: 187 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKE 245
Query: 788 PDNR 791
P+ R
Sbjct: 246 PEER 249
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 92
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 93 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 149
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 181 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 240
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 241 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 300
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 301 KRITAAQALA----HAYF 314
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 115 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 170 DHEHRKLRLIDWGLA 184
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 108 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 163 DHEHRKLRLIDWGLA 177
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV E+ D KQ + ++ RFY+ E+L AL+Y H +G+++RD+KP N+++
Sbjct: 110 ALVFEHVNNTDF-----KQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
Query: 606 -REDGHIMLSDFDLS 619
E + L D+ L+
Sbjct: 165 DHEHRKLRLIDWGLA 179
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M++++H + L FT +K F +VME V++ +
Sbjct: 69 RAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----L 123
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ G F G+ + + + V+ Q
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 96
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 97 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 153
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLA 182
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 185 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 244
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 245 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 304
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 305 KRITAAQALA----HAYF 318
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 15 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 70
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + S + ++ A+EYL
Sbjct: 71 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLS 156
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 72
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + S + ++ A+EYL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 34/131 (25%)
Query: 707 FVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------------- 752
FV T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 753 --DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPDNRLGAVK 796
E L + S+S R P ++F A DL+ +LV + D R+ A +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 797 GAAEIKQHPFF 807
A H +F
Sbjct: 302 ALA----HAYF 308
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 34/131 (25%)
Query: 707 FVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------------- 752
FV T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 753 --DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPDNRLGAVK 796
E L + S+S R P ++F A DL+ +LV + D R+ A +
Sbjct: 242 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 797 GAAEIKQHPFF 807
A H +F
Sbjct: 302 ALA----HAYF 308
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLA 172
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +VMEY G L + + ++ A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 788 PDNR 791
P+ R
Sbjct: 256 PEER 259
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE--IMQMLDH 529
F+ +LG G+ G V+ + + A K++ + K R Q RE ++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNS 63
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL- 588
P++ + F ++ + ME+ GG L + +K R + + +A V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLR 121
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RD+KP NILV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF--KGSGNDETLSNVVS 761
+NSFVGT Y++PE ++G + D W+ G+ L E+ GR P + D +
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF 219
Query: 762 QSLRF------PGYP--VVSFHARDLIRGLLVKEPDNR 791
+ L + P P V S +D + L+K P R
Sbjct: 220 ELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAER 257
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 82
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 139
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 55/131 (41%), Gaps = 34/131 (25%)
Query: 707 FVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------------- 752
FV T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 178 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 753 --DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPDNRLGAVK 796
E L + S+S R P ++F A DL+ +LV + D R+ A +
Sbjct: 238 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 797 GAAEIKQHPFF 807
A H +F
Sbjct: 298 ALA----HAYF 304
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 455 DAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKM 514
D I + G + F + +K+G G G V L + I +A+KV+ N +K
Sbjct: 20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYT 75
Query: 515 PRAQTEREIMQMLDHPFLPT-----LFAHFTTEKFSCLVMEYCPGG-DLHVLRQKQPSRF 568
A+ E +I++ + + + F CL+ E P G L+ + +
Sbjct: 76 RSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFE--PLGPSLYEIITRNNYNG 133
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVRE 607
F + + Y E+L AL YL + + + DLKPENIL+ +
Sbjct: 134 FHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 706 SFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
S + T +Y APE+I G S D W+FG L EL G F+ + E L+
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLA 269
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 23/155 (14%)
Query: 465 GCMGMRH---FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA---- 517
G M R+ F +K+G G+ G+V+ C++A+K R K P A
Sbjct: 1 GAMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---------RSKKPLAGSVD 51
Query: 518 --QTEREIMQ---MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH--VLRQKQPSRFFS 570
RE+ + H + F+ + + + EYC GG L + + +F
Sbjct: 52 EQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFK 111
Query: 571 EQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
E + + +V L Y+H + +V+ D+KP NI +
Sbjct: 112 EAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFI 146
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 72
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + S + ++ A+EYL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 82
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 139
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 291 KRITAAQALA----HAYF 304
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
S Q ++++ +LL L LH GVV+RDL P NIL+ ++ I + DF+L+
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 698 EPTGARSNSFVGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+ A +V Y APE++ + +G VD W+ G + E+ + F+GS T
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TF 239
Query: 757 SNVVSQSLRFPGYP----VVSF---HARDLIRGLLVKEPDNRLGAVKGAAE 800
N +++ + G P VV F ARD +R L P AV A+
Sbjct: 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTAD 290
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K ++F Q +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LR 154
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF L+
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V+EY G L + + ++ A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 788 PDNR 791
P+ R
Sbjct: 256 PEER 259
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
S Q ++++ +LL L LH GVV+RDL P NIL+ ++ I + DF+L+
Sbjct: 132 SPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 698 EPTGARSNSFVGTHEYLAPEII-KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+ A +V Y APE++ + +G VD W+ G + E+ + F+GS T
Sbjct: 184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS----TF 239
Query: 757 SNVVSQSLRFPGYP----VVSF---HARDLIRGLLVKEPDNRLGAVKGAAE 800
N +++ + G P VV F ARD +R L P AV A+
Sbjct: 240 YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTAD 290
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 18 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 73
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E +++E+ G+L ++ + + + ++ A+EYL
Sbjct: 74 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLS 159
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 186 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 240
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 241 LVQLYAVVSEEPIY-IVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLA 327
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ KE
Sbjct: 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKE 421
Query: 788 PDNR 791
P+ R
Sbjct: 422 PEER 425
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K+LG G G V + G + A+K++ G E ++M L H L L
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDV-AIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ T ++ ++ EY G L ++ RF ++Q +V A+EYL ++
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLH 143
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV + G + +SDF LS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLS 167
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 716 PEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRF 766
PE++ S D W FG+ ++E+ G+ P++ N ET + ++Q LR
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 240
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV EY D KQ + ++ RFY+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 111 ALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
+F++ KK+GCG+ G + L + + T+ A+K+ + + P+ E + L
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPI-----KSRAPQLHLEYRFYKQLSAT 59
Query: 531 -FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+P ++ K++ +V+E G L L R F+ + +++ +EY+H
Sbjct: 60 EGVPQVYYFGPXGKYNAMVLELL-GPSLEDLFD-LCDRTFTLKTVLMIAIQLITRMEYVH 117
Query: 590 MLGVVYRDLKPENILVREDGH-----IMLSDFDLS 619
++YRD+KPEN LV G I + DF L+
Sbjct: 118 TKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K+LG G G V + G + A+K++ G E ++M L H L L
Sbjct: 30 KELGTGQFGVVKYGKWRGQYDV-AIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ T ++ ++ EY G L ++ RF ++Q +V A+EYL ++
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLH 143
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV + G + +SDF LS
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLS 167
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 716 PEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRF 766
PE++ S D W FG+ ++E+ G+ P++ N ET + ++Q LR
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 240
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V+EY G L + + ++ A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 788 PDNR 791
P+ R
Sbjct: 256 PEER 259
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + D+ L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLA 172
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 96
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHMLGVV 594
F ++T+ +V ++C G L+ ++F E +A + ++YLH ++
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 154
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDLK NI + ED + + DF L+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 709 GTHEYLAPEIIKGEG---HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLR 765
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ N + + +V +
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 766 FP 767
P
Sbjct: 256 SP 257
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 80/161 (49%), Gaps = 23/161 (14%)
Query: 469 MRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKV--MDNDFLVGRKKMPR-AQTEREIMQ 525
M+ ++ +K+G G GTV+ A+ T + ALK +D+D + +P A E +++
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD----DEGVPSSALREICLLK 56
Query: 526 MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSE-------QAARFYV 578
L H + L ++K LV E+C + ++F + + ++
Sbjct: 57 ELKHKNIVRLHDVLHSDKKLTLVFEFC---------DQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 579 AEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++L L + H V++RDLKP+N+L+ +G + L++F L+
Sbjct: 108 FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 73
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHMLGVV 594
F ++T+ +V ++C G L+ ++F E +A + ++YLH ++
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 131
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDLK NI + ED + + DF L+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSF---VGTHEYLAPEIIKGEG---HGSSVDWWTFG 734
+ DL ++ V+ + S+ F G+ ++APE+I+ + + D + FG
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
Query: 735 IFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
I L+EL+ G+ P+ N + + +V + P
Sbjct: 202 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 88
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHMLGVV 594
F ++T+ +V ++C G L+ ++F E +A + ++YLH ++
Sbjct: 89 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 146
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDLK NI + ED + + DF L+
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLA 171
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 709 GTHEYLAPEIIKGEG---HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLR 765
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ N + + +V +
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 766 FP 767
P
Sbjct: 248 SP 249
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 73
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHMLGVV 594
F ++T+ +V ++C G L+ ++F E +A + ++YLH ++
Sbjct: 74 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 131
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDLK NI + ED + + DF L+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA 156
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSF---VGTHEYLAPEIIKGEG---HGSSVDWWTFG 734
+ DL ++ V+ + S+ F G+ ++APE+I+ + + D + FG
Sbjct: 142 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 201
Query: 735 IFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
I L+EL+ G+ P+ N + + +V + P
Sbjct: 202 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 234
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 13 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 67
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 68 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 126
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 127 NYVHRDLRAANILVGENLVCKVADFGLA 154
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ KE
Sbjct: 190 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKE 248
Query: 788 PDNR 791
P+ R
Sbjct: 249 PEER 252
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 11 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 67
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L QK R + + Y +++
Sbjct: 68 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ-YTSQICK 126
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++R+L NILV + + + DF L+
Sbjct: 127 GMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT 162
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 473 KLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFL 532
KL K+LG G G V++ S A+K + G + E +M+ L H L
Sbjct: 16 KLVKRLGAGQFGEVWMG-YYNNSTKVAVKTLKP----GTMSVQAFLEEANLMKTLQHDKL 70
Query: 533 PTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+A T E+ ++ EY G L L+ + + + F A++ + Y+
Sbjct: 71 VRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIERK 129
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ N+LV E ++DF L+
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLA 157
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
++ APE I D W+FGI L+E++ YG+ P+ G N + ++ +SQ R P
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMT-ALSQGYRMP 231
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 95
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHMLGVV 594
F ++T+ +V ++C G L+ ++F E +A + ++YLH ++
Sbjct: 96 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 153
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDLK NI + ED + + DF L+
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLA 178
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSF---VGTHEYLAPEIIKGEG---HGSSVDWWTFG 734
+ DL ++ V+ + S+ F G+ ++APE+I+ + + D + FG
Sbjct: 164 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 223
Query: 735 IFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
I L+EL+ G+ P+ N + + +V + P
Sbjct: 224 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 256
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 96
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHMLGVV 594
F ++T+ +V ++C G L+ ++F E +A + ++YLH ++
Sbjct: 97 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 154
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDLK NI + ED + + DF L+
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLA 179
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSF---VGTHEYLAPEIIKGEG---HGSSVDWWTFG 734
+ DL ++ V+ + S+ F G+ ++APE+I+ + + D + FG
Sbjct: 165 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 735 IFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
I L+EL+ G+ P+ N + + +V + P
Sbjct: 225 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 257
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 70
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHMLGVV 594
F ++T+ +V ++C G L+ ++F E +A + ++YLH ++
Sbjct: 71 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 128
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDLK NI + ED + + DF L+
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLA 153
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSF---VGTHEYLAPEIIKGEG---HGSSVDWWTFG 734
+ DL ++ V+ + S+ F G+ ++APE+I+ + + D + FG
Sbjct: 139 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 198
Query: 735 IFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
I L+EL+ G+ P+ N + + +V + P
Sbjct: 199 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 231
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 20/158 (12%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKV-MDNDFLVGRKKMPRAQTERE-------- 522
K+ + +G G+ G V C LK+ D V K + TE++
Sbjct: 45 IKIERVIGAGEFGEV---------CSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEA 95
Query: 523 -IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEV 581
IM DHP + L T K +V+E+ G L +K +F Q + +
Sbjct: 96 SIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGM-LRGI 154
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ YL +G V+RDL NILV + +SDF LS
Sbjct: 155 AAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLS 192
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 673 SVAAKSRKIKSDLAAQVSPM---------PQLVVEPTGARSNSFVGTHEYLAPEIIKGEG 723
+AA++ + S+L +VS P+ V TG + + APE I+
Sbjct: 170 DLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPV-----RWTAPEAIQYRK 224
Query: 724 HGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
S+ D W++GI ++E++ YG P+ N + + + + R P
Sbjct: 225 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 268
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 263 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 318
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 319 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 378
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++R+L N LV E+ + ++DF LS
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLS 404
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 473 KLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF- 531
++ KK+GCG+ G + L + + T+ A+K+ + + P+ E + L
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPI-----KSRAPQLHLEYRFYKQLGSAGE 57
Query: 532 -LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
LP ++ K++ +V+E G L L R F+ + ++L +EY+H
Sbjct: 58 GLPQVYYFGPXGKYNAMVLELL-GPSLEDLFD-LCDRTFTLKTVLMIAIQLLSRMEYVHS 115
Query: 591 LGVVYRDLKPENILVREDGH-----IMLSDFDLS 619
++YRD+KPEN L+ G+ I + DF L+
Sbjct: 116 KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 69/156 (44%), Gaps = 10/156 (6%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
RH K ++LG G+ G+V + T + A+K + + + + + E EI++
Sbjct: 13 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILK 69
Query: 526 MLDHPFLPTL--FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
L H + + + L+MEY P G L Q R + + Y +++
Sbjct: 70 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQ-YTSQICK 128
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+EYL ++RDL NILV + + + DF L+
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT 164
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 546 CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
LV EY D KQ + ++ RFY+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 116 ALVFEYINNTDF-----KQLYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLA 172
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V EY G L +K ++F Q +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGM-LR 154
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ ++YL +G V+RDL NIL+ + +SDF L
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE--IMQMLDH 529
F+ +LG G+ G V+ + + A K++ + K R Q RE ++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNS 63
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL- 588
P++ + F ++ + ME+ GG L + +K R + + +A V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLR 121
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RD+KP NILV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 62/154 (40%), Gaps = 21/154 (13%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRF------ 766
Y+APE++ E + S D W+ G+ + LL G PF S + +S +R
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFY-SNHGLAISPGXKTRIRXGQYEFP 287
Query: 767 -PGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELPR 825
P + VS + LIR LL EP R E HP+ + + P+ P
Sbjct: 288 NPEWSEVSEEVKXLIRNLLKTEPTQR----XTITEFXNHPW-------IXQSTKVPQTPL 336
Query: 826 SCDAVIGSQKK--ESTKCEESKGAADEHVEFEMF 857
V+ K+ E K E + A V++E
Sbjct: 337 HTSRVLKEDKERWEDVKEEXTSALATMRVDYEQI 370
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 539 FTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDL 598
+ K +V E GG+L Q + + F+E+ A + A++YLH + + +RD+
Sbjct: 128 YAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDV 187
Query: 599 KPENILV---REDGHIMLSDFDLS 619
KPEN+L R + + L+DF +
Sbjct: 188 KPENLLYTSKRPNAILKLTDFGFA 211
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE--IMQMLDH 529
F+ +LG G+ G V+ + + A K++ + K R Q RE ++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNS 63
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL- 588
P++ + F ++ + ME+ GG L + +K R + + +A V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLR 121
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RD+KP NILV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 78/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + TL T + +++EY G+L LR ++P +R EQ
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 221 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 276
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 277 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 336
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++R+L N LV E+ + ++DF LS
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLS 362
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 77
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E +++E+ G+L ++ + + + ++ A+EYL
Sbjct: 78 QLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA------QTEREIMQ---M 526
+K+G G+ G+V+ C++A+K R K P A RE+ +
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIK---------RSKKPLAGSVDEQNALREVYAHAVL 63
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH--VLRQKQPSRFFSEQAARFYVAEVLLA 584
H + F+ + + + EYC GG L + + +F E + + +V
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 585 LEYLHMLGVVYRDLKPENILV 605
L Y+H + +V+ D+KP NI +
Sbjct: 124 LRYIHSMSLVHMDIKPSNIFI 144
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 474 LHKKLGCGDIGTVYLAELIGTS-------CLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
L K LG G G V LAE IG A+K++ +D K + +E E+M+M
Sbjct: 24 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 81
Query: 527 L-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQ--------------PSRFFSE 571
+ H + L T + +++EY G+L Q + P S
Sbjct: 82 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
Query: 572 QAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V +EYL ++RDL N+LV ED + ++DF L+
Sbjct: 142 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA------QTEREIMQ---M 526
+K+G G+ G+V+ C++A+K R K P A RE+ +
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIK---------RSKKPLAGSVDEQNALREVYAHAVL 65
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH--VLRQKQPSRFFSEQAARFYVAEVLLA 584
H + F+ + + + EYC GG L + + +F E + + +V
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 585 LEYLHMLGVVYRDLKPENILV 605
L Y+H + +V+ D+KP NI +
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFI 146
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHMLGVV 594
F ++T+ +V ++C G L+ ++F E +A + ++YLH ++
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 126
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDLK NI + ED + + DF L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Query: 709 GTHEYLAPEIIKGEG---HGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLR 765
G+ ++APE+I+ + + D + FGI L+EL+ G+ P+ N + + +V +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 766 FP 767
P
Sbjct: 228 SP 229
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHMLGVV 594
F ++T+ +V ++C G L+ ++F E +A + ++YLH ++
Sbjct: 69 FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 126
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDLK NI + ED + + DF L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSF---VGTHEYLAPEIIKGEG---HGSSVDWWTFG 734
+ DL ++ V+ + S+ F G+ ++APE+I+ + + D + FG
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 735 IFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
I L+EL+ G+ P+ N + + +V + P
Sbjct: 197 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 187 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGNMSPEAFLQEAQ----VMKKLRHEK 241
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 242 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGLG 328
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 422
Query: 788 PDNR 791
P+ R
Sbjct: 423 PEER 426
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----L 123
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ G F G+ + + + V+ Q
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 474 LHKKLGCGDIGTVYLAELIGTS-------CLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
L K LG G G V LAE IG A+K++ +D K + +E E+M+M
Sbjct: 21 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 78
Query: 527 L-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQ--------------PSRFFSE 571
+ H + L T + +++EY G+L Q + P S
Sbjct: 79 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
Query: 572 QAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V +EYL ++RDL N+LV ED + ++DF L+
Sbjct: 139 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 473 KLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFL 532
KL KKLG G G V++ S A+K + G + E +M+ L H L
Sbjct: 15 KLVKKLGAGQFGEVWMG-YYNNSTKVAVKTLKP----GTMSVQAFLEEANLMKTLQHDKL 69
Query: 533 PTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L+A T E+ ++ E+ G L L+ + + + F A++ + Y+
Sbjct: 70 VRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF-SAQIAEGMAYIERK 128
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ N+LV E ++DF L+
Sbjct: 129 NYIHRDLRAANVLVSESLMCKIADFGLA 156
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
++ APE I + W+FGI L+E++ YG+ P+ G N + +S +SQ R P
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMS-ALSQGYRMP 230
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K+LG G G V + G + A+K++ G E ++M L H L L
Sbjct: 14 KELGTGQFGVVKYGKWRGQYDV-AIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ T ++ ++ EY G L ++ RF ++Q +V A+EYL ++
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLH 127
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV + G + +SDF LS
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLS 151
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 716 PEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRF 766
PE++ S D W FG+ ++E+ G+ P++ N ET + ++Q LR
Sbjct: 174 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 224
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 474 LHKKLGCGDIGTVYLAELIGTS-------CLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
L K LG G G V LAE IG A+K++ +D K + +E E+M+M
Sbjct: 17 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 74
Query: 527 L-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQ--------------PSRFFSE 571
+ H + L T + +++EY G+L Q + P S
Sbjct: 75 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
Query: 572 QAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V +EYL ++RDL N+LV ED + ++DF L+
Sbjct: 135 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K+LG G G V + G + A+K++ G E ++M L H L L
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDV-AIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ T ++ ++ EY G L ++ RF ++Q +V A+EYL ++
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLH 128
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV + G + +SDF LS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLS 152
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 716 PEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRF 766
PE++ S D W FG+ ++E+ G+ P++ N ET + ++Q LR
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 225
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 16/174 (9%)
Query: 447 HMS-NDLRWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN 505
HMS N +W+ R + M+H KLG G G VY S A+K +
Sbjct: 2 HMSPNYDKWEMERT------DITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKE 50
Query: 506 DFLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQP 565
D + ++ E +M+ + HP L L T E ++ E+ G+L ++
Sbjct: 51 DTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 106
Query: 566 SRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++ A+EYL ++RDL N LV E+ + ++DF LS
Sbjct: 107 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G G V+L + KV G E E+M L HP L L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKD-----KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ + CLV E+ G L + Q F +E + +V + YL V++
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEASVIH 126
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV E+ I +SDF ++
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMT 150
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYP 770
++ +PE+ + S D W+FG+ ++E+ G+ P++ N E + + +S R
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 227
Query: 771 VVSFHARDLIRGLLVKEPDNR 791
+ S H ++ + P++R
Sbjct: 228 LASTHVYQIMNHCWKERPEDR 248
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 474 LHKKLGCGDIGTVYLAELIGTS-------CLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
L K LG G G V LAE IG A+K++ +D K + +E E+M+M
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 89
Query: 527 L-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQ--------------PSRFFSE 571
+ H + L T + +++EY G+L Q + P S
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
Query: 572 QAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V +EYL ++RDL N+LV ED + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K+LG G G V + G + A+K++ G E ++M L H L L
Sbjct: 21 KELGTGQFGVVKYGKWRGQYDV-AIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ T ++ ++ EY G L ++ RF ++Q +V A+EYL ++
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLH 134
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV + G + +SDF LS
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLS 158
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 716 PEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRF 766
PE++ S D W FG+ ++E+ G+ P++ N ET + ++Q LR
Sbjct: 181 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 231
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 474 LHKKLGCGDIGTVYLAELIGTS-------CLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
L K LG G G V LAE IG A+K++ +D K + +E E+M+M
Sbjct: 25 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 82
Query: 527 L-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQ--------------PSRFFSE 571
+ H + L T + +++EY G+L Q + P S
Sbjct: 83 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
Query: 572 QAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V +EYL ++RDL N+LV ED + ++DF L+
Sbjct: 143 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 71
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 788 PDNR 791
P+ R
Sbjct: 253 PEER 256
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 71 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 125
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 126 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 707 FVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
FV T Y APE+I G G+ +VD W+ G + E++ G F G+ + + + V+ Q
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 242
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K+LG G G V + G + A+K++ G E ++M L H L L
Sbjct: 10 KELGTGQFGVVKYGKWRGQYDV-AIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ T ++ ++ EY G L ++ RF ++Q +V A+EYL ++
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLH 123
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV + G + +SDF LS
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLS 147
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 716 PEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRF 766
PE++ S D W FG+ ++E+ G+ P++ N ET + ++Q LR
Sbjct: 170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 220
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 474 LHKKLGCGDIGTVYLAELIGTS-------CLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
L K LG G G V LAE IG A+K++ +D K + +E E+M+M
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 89
Query: 527 L-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQ--------------PSRFFSE 571
+ H + L T + +++EY G+L Q + P S
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
Query: 572 QAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V +EYL ++RDL N+LV ED + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 77
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 16/174 (9%)
Query: 447 HMS-NDLRWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDN 505
HMS N +W+ R + M+H KLG G G VY S A+K +
Sbjct: 2 HMSPNYDKWEMERT------DITMKH-----KLGGGQYGEVYEGVWKKYSLTVAVKTLKE 50
Query: 506 DFLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQP 565
D + ++ E +M+ + HP L L T E ++ E+ G+L ++
Sbjct: 51 DTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 106
Query: 566 SRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++ A+EYL ++RDL N LV E+ + ++DF LS
Sbjct: 107 RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 9 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 63
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 64 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFGLA 150
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 186 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 244
Query: 788 PDNR 791
P+ R
Sbjct: 245 PEER 248
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 20/158 (12%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKV-MDNDFLVGRKKMPRAQTERE-------- 522
K+ K +G G+ G V C LKV + V K + T+++
Sbjct: 16 IKIEKVIGVGEFGEV---------CSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 66
Query: 523 -IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEV 581
IM DHP + L T K ++ EY G L +K RF Q + +
Sbjct: 67 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM-LRGI 125
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++YL + V+RDL NILV + +SDF +S
Sbjct: 126 GSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 674 VAAKSRKIKSDLAAQVSP--MPQLVVEPTGARSNSFVGTH--EYLAPEIIKGEGHGSSVD 729
+AA++ + S+L +VS M +++ + A + G + APE I S+ D
Sbjct: 142 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 201
Query: 730 WWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
W++GI ++E++ YG P+ N + + + + R P
Sbjct: 202 VWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 239
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 474 LHKKLGCGDIGTVYLAELIGTS-------CLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
L K LG G G V LAE IG A+K++ +D K + +E E+M+M
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 89
Query: 527 L-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQ--------------PSRFFSE 571
+ H + L T + +++EY G+L Q + P S
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
Query: 572 QAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V +EYL ++RDL N+LV ED + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 20/158 (12%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKV-MDNDFLVGRKKMPRAQTERE-------- 522
K+ K +G G+ G V C LKV + V K + T+++
Sbjct: 31 IKIEKVIGVGEFGEV---------CSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 81
Query: 523 -IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEV 581
IM DHP + L T K ++ EY G L +K RF Q + +
Sbjct: 82 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM-LRGI 140
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++YL + V+RDL NILV + +SDF +S
Sbjct: 141 GSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE I S+ D W++GI ++E++ YG P+ N + + + + R P
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 254
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 17 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 71
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 72 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERM 130
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 131 NYVHRDLRAANILVGENLVCKVADFGLA 158
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ KE
Sbjct: 194 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKE 252
Query: 788 PDNR 791
P+ R
Sbjct: 253 PEER 256
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 13/156 (8%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLD 528
++++ +G G G VYLA + A+K ++ F L+ K++ R T I+ L
Sbjct: 29 NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREIT---ILNRLK 85
Query: 529 HPFLPTLFAHFTTE---KFS--CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
++ L E KF +V+E DL L K P F +EQ + + +LL
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLF-KTPI-FLTEQHVKTILYNLLL 142
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++H G+++RDLKP N L+ +D + + DF L+
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G VYLA T A+K ++ F L+ K++ R T I+ L ++ L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREIT---ILNRLKSDYIIRL 90
Query: 536 FAHFTTE---KFSCL--VMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+ + KF L V+E DL L K P F +E+ + + +LL ++H
Sbjct: 91 YDLIIPDDLLKFDELYIVLE-IADSDLKKLF-KTPI-FLTEEHIKTILYNLLLGENFIHE 147
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
G+++RDLKP N L+ +D + + DF L+
Sbjct: 148 SGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 788 PDNR 791
P+ R
Sbjct: 256 PEER 259
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 18 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 73
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 74 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLS 159
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE--IMQMLDH 529
F+ +LG G+ G V+ + + A K++ + K R Q RE ++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNS 63
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL- 588
P++ + F ++ + ME+ GG L + +K R + + +A V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLR 121
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RD+KP NILV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE--IMQMLDH 529
F+ +LG G+ G V+ + + A K++ + K R Q RE ++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI----KPAIRNQIIRELQVLHECNS 63
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYL- 588
P++ + F ++ + ME+ GG L + +K R + + +A V+ L YL
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA-GRIPEQILGKVSIA-VIKGLTYLR 121
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RD+KP NILV G I L DF +S
Sbjct: 122 EKHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
+NSFVGT Y++PE ++G + D W+ G+ L E+ GR P
Sbjct: 160 ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 11 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 65
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFGLA 152
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 188 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 246
Query: 788 PDNR 791
P+ R
Sbjct: 247 PEER 250
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 64/158 (40%), Gaps = 20/158 (12%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKV-MDNDFLVGRKKMPRAQTERE-------- 522
K+ K +G G+ G V C LKV + V K + T+++
Sbjct: 10 IKIEKVIGVGEFGEV---------CSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 60
Query: 523 -IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEV 581
IM DHP + L T K ++ EY G L +K RF Q + +
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM-LRGI 119
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++YL + V+RDL NILV + +SDF +S
Sbjct: 120 GSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 674 VAAKSRKIKSDLAAQVSP--MPQLVVEPTGARSNSFVGTH--EYLAPEIIKGEGHGSSVD 729
+AA++ + S+L +VS M +++ + A + G + APE I S+ D
Sbjct: 136 LAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASD 195
Query: 730 WWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
W++GI ++E++ YG P+ N + + + + R P
Sbjct: 196 VWSYGIVMWEVMSYGERPYWDMSNQDVI-KAIEEGYRLP 233
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 65/144 (45%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
K+LG G G V + G + A+K++ G E ++M L H L L
Sbjct: 15 KELGTGQFGVVKYGKWRGQYDV-AIKMIKE----GSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ T ++ ++ EY G L ++ RF ++Q +V A+EYL ++
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLESKQFLH 128
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV + G + +SDF LS
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLS 152
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 716 PEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRF 766
PE++ S D W FG+ ++E+ G+ P++ N ET + ++Q LR
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH-IAQGLRL 225
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R FS A Y ++
Sbjct: 65 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQL 120
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + + L DF LS
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVM------DNDFLVGRKKMPRAQTEREIMQMLDH 529
+++G G G V+L + + A+K + ++DF+ E E+M L H
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKV-AIKTIKEGSMSEDDFI----------EEAEVMMKLSH 81
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P L L+ + CLV E+ G L + Q F +E + +V + YL
Sbjct: 82 PKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLE 140
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
V++RDL N LV E+ I +SDF ++
Sbjct: 141 EACVIHRDLAARNCLVGENQVIKVSDFGMT 170
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 674 VAAKSRKIKSDLAAQVSP--MPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWW 731
+AA++ + + +VS M + V++ S ++ +PE+ + S D W
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 732 TFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDN 790
+FG+ ++E+ G+ P++ N E + + +S R + S H ++ + P++
Sbjct: 209 SFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPED 267
Query: 791 R 791
R
Sbjct: 268 R 268
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 123
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ G F G+ + + + V+ Q
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 123
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 58/157 (36%), Gaps = 44/157 (28%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDE------------- 754
V T Y APE+I G G+ +VD W+ G + E++ + F G +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 755 ---------TLSNVVSQSLRFPGY------PVVSF------------HARDLIRGLLVKE 787
T+ N V ++ GY P V F ARDL+ +LV +
Sbjct: 246 PAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 788 PDNRLGAVKGAAEIKQHPFFEGLNWALIRCAVPPELP 824
R+ E QHP+ A PP++P
Sbjct: 306 ASKRI----SVDEALQHPYINVWYDPSEAEAPPPKIP 338
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 70 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 124
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 125 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 160 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 219
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ G F G+ + + + V+ Q
Sbjct: 220 IKGGVLFPGTDHIDQWNKVIEQ 241
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 123
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
V T Y APE+I G G+ +VD W+ G + E++ G F G+ + + + V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 77
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 8/145 (5%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G GTVY + G + L V +++ + E +++ H + L
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPT----PQQLQAFKNEVGVLRKTRHVNI-LL 68
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA-EVLLALEYLHMLGVV 594
F ++T +V ++C G L+ ++F E +A + ++YLH ++
Sbjct: 69 FMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKF--EMIKLIDIARQTAQGMDYLHAKSII 126
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDLK NI + ED + + DF L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSF---VGTHEYLAPEIIKGEG---HGSSVDWWTFG 734
+ DL ++ V+ + S+ F G+ ++APE+I+ + + D + FG
Sbjct: 137 LHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFG 196
Query: 735 IFLFELLYGRTPFKGSGNDETLSNVVSQSLRFP 767
I L+EL+ G+ P+ N + + +V + P
Sbjct: 197 IVLYELMTGQLPYSNINNRDQIIFMVGRGYLSP 229
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R FS A Y ++
Sbjct: 445 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQL 500
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + + L DF LS
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 19 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 74
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 75 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLS 160
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 788 PDNR 791
P+ R
Sbjct: 256 PEER 259
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAEL---IGTSCLFALKVMDNDFLVGRKKMPRAQTEREI 523
+G + +L +KLG G G V E G + A+K + D L + M E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
M LDH L L+ T +V E P G L +K F +R Y +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 126
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ YL ++RDL N+L+ + + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE +K + D W FG+ L+E+ YG+ P+ G + L + + R P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 474 LHKKLGCGDIGTVYLAELIGTS-------CLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
L K LG G G V LAE IG A+K++ +D K + +E E+M+M
Sbjct: 32 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 89
Query: 527 L-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQ--------------PSRFFSE 571
+ H + L T + +++EY G+L Q + P S
Sbjct: 90 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
Query: 572 QAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V +EYL ++RDL N+LV ED + ++DF L+
Sbjct: 150 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 74 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 128
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 129 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 164 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 223
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ + F G + + V+ Q
Sbjct: 224 VCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 474 LHKKLGCGDIGTVYLAELIGTS-------CLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
L K LG G G V LAE IG A+K++ +D K + +E E+M+M
Sbjct: 73 LGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKM 130
Query: 527 L-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQ--------------PSRFFSE 571
+ H + L T + +++EY G+L Q + P S
Sbjct: 131 IGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
Query: 572 QAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V +EYL ++RDL N+LV ED + ++DF L+
Sbjct: 191 KDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 123
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ G F G+ + + + V+ Q
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G G V+L + KV G E E+M L HP L L
Sbjct: 16 QEIGSGQFGLVHLGYWLNKD-----KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 70
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ + CLV E+ G L + Q F +E + +V + YL V++
Sbjct: 71 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIH 129
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV E+ I +SDF ++
Sbjct: 130 RDLAARNCLVGENQVIKVSDFGMT 153
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 674 VAAKSRKIKSDLAAQVSP--MPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWW 731
+AA++ + + +VS M + V++ S ++ +PE+ + S D W
Sbjct: 132 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 191
Query: 732 TFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDN 790
+FG+ ++E+ G+ P++ N E + + +S R + S H ++ + P++
Sbjct: 192 SFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPRLASTHVYQIMNHCWRERPED 250
Query: 791 R 791
R
Sbjct: 251 R 251
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G G V+L + KV G E E+M L HP L L
Sbjct: 13 QEIGSGQFGLVHLGYWLNKD-----KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 67
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ + CLV E+ G L + Q F +E + +V + YL V++
Sbjct: 68 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIH 126
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV E+ I +SDF ++
Sbjct: 127 RDLAARNCLVGENQVIKVSDFGMT 150
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYP 770
++ +PE+ + S D W+FG+ ++E+ G+ P++ N E + + +S R
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 227
Query: 771 VVSFHARDLIRGLLVKEPDNR 791
+ S H ++ + P++R
Sbjct: 228 LASTHVYQIMNHCWKERPEDR 248
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 123
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQ 762
V T Y APE+I G G+ +VD W+ G + E++ + F G + + V+ Q
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 21 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 76
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 77 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLS 162
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 22 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 77
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 78 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLS 163
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 63 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-----L 117
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 118 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 153 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEM 212
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ + F G + + V+ Q
Sbjct: 213 VCHKILFPGRDYIDQWNKVIEQ 234
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 30 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 85
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 86 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLS 171
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G G V+L + KV G E E+M L HP L L
Sbjct: 11 QEIGSGQFGLVHLGYWLNKD-----KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 65
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ + CLV E+ G L + Q F +E + +V + YL V++
Sbjct: 66 YGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIH 124
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV E+ I +SDF ++
Sbjct: 125 RDLAARNCLVGENQVIKVSDFGMT 148
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 674 VAAKSRKIKSDLAAQVSP--MPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWW 731
+AA++ + + +VS M + V++ S ++ +PE+ + S D W
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 732 TFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDN 790
+FG+ ++E+ G+ P++ N E + + +S R + S H ++ + P++
Sbjct: 187 SFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPED 245
Query: 791 R 791
R
Sbjct: 246 R 246
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
L+ EY D VL P+ ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 107 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 160
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
L+ EY D VL P+ ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 106 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
L+ EY D VL P+ ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
L+ EY D VL P+ ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 106 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 71/164 (43%), Gaps = 16/164 (9%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELI---GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+ F L + LG G+ G+V A+L G+ A+K++ D ++ + E M+
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD-IIASSDIEEFLREAACMKE 81
Query: 527 LDHPFLPTLFAHFTTEK------FSCLVMEYCPGGDLHVLR-----QKQPSRFFSEQAAR 575
DHP + L + +++ + GDLH + P + R
Sbjct: 82 FDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVR 141
Query: 576 FYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
F V ++ +EYL ++RDL N ++ ED + ++DF LS
Sbjct: 142 FMV-DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLS 184
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 72
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
L+ EY D VL P+ ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 126 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
L+ EY D VL P+ ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ + H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKIRHEK 74
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 788 PDNR 791
P+ R
Sbjct: 256 PEER 259
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 4/146 (2%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
+ KLG G G VY S A+K + D + ++ E +M+ + HP L
Sbjct: 17 MKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLV 72
Query: 534 TLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGV 593
L T E ++ E+ G+L ++ + + + ++ A+EYL
Sbjct: 73 QLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV E+ + ++DF LS
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLS 158
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
L+ EY D VL P+ ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 519 TEREIMQMLDHPFLPTLFAHFTTEKFSCL--VMEYCPGGDLH--VLRQKQPSRFFSEQAA 574
+E +++ L HP + + + L VMEYC GGDL + + + ++ E+
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 575 RFYVAEVLLALEYLHMLG-----VVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ LAL+ H V++RDLKP N+ + ++ L DF L+
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
+ +FVGT Y++PE + + D W+ G L+EL PF E +
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 232
Query: 764 LR 765
R
Sbjct: 233 FR 234
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 6/144 (4%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+++G G G V+L + KV G E E+M L HP L L
Sbjct: 14 QEIGSGQFGLVHLGYWLNKD-----KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQL 68
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVY 595
+ + CLV E+ G L + Q F +E + +V + YL V++
Sbjct: 69 YGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEACVIH 127
Query: 596 RDLKPENILVREDGHIMLSDFDLS 619
RDL N LV E+ I +SDF ++
Sbjct: 128 RDLAARNCLVGENQVIKVSDFGMT 151
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYP 770
++ +PE+ + S D W+FG+ ++E+ G+ P++ N E + + +S R
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPR 228
Query: 771 VVSFHARDLIRGLLVKEPDNR 791
+ S H ++ + P++R
Sbjct: 229 LASTHVYQIMNHCWRERPEDR 249
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 519 TEREIMQMLDHPFLPTLFAHFTTEKFSCL--VMEYCPGGDLH--VLRQKQPSRFFSEQAA 574
+E +++ L HP + + + L VMEYC GGDL + + + ++ E+
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 575 RFYVAEVLLALEYLHMLG-----VVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ LAL+ H V++RDLKP N+ + ++ L DF L+
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
+ +FVGT Y++PE + + D W+ G L+EL PF E +
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 232
Query: 764 LR 765
R
Sbjct: 233 FR 234
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
L+ EY D VL P+ ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V E G L +K ++F Q +
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM-LR 125
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 126 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 165
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 241
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
L+ EY D VL P+ ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV 605
L+ EY D VL P+ ++ R+Y+ E+L AL+Y H G+++RD+KP N+++
Sbjct: 105 LIFEYVNNTDFKVL---YPT--LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 11/110 (10%)
Query: 516 RAQTEREIMQMLDHPFLPTLFAHFTTEK----FS--CLVMEYCPGGDLHVLRQKQPSRFF 569
RA E +M+ ++H + L FT +K F +VME V++ +
Sbjct: 69 RAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-----L 123
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + + ++L +++LH G+++RDLKP NI+V+ D + + DF L+
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%)
Query: 681 IKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFEL 740
+KSD ++ T +V T Y APE+I G G+ +VD W+ G + E+
Sbjct: 159 VKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM 218
Query: 741 LYGRTPFKGSGNDETLSNVVSQ 762
+ G F G+ + + + V+ Q
Sbjct: 219 IKGGVLFPGTDHIDQWNKVIEQ 240
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAEL---IGTSCLFALKVMDNDFLVGRKKMPRAQTEREI 523
+G + +L +KLG G G V E G + A+K + D L + M E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
M LDH L L+ T +V E P G L +K F +R Y +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 132
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ YL ++RDL N+L+ + + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE +K + D W FG+ L+E+ YG+ P+ G + L + + R P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + F L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLA 172
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 519 TEREIMQMLDHPFLPTLFAHFTTEKFSCL--VMEYCPGGDLH--VLRQKQPSRFFSEQAA 574
+E +++ L HP + + + L VMEYC GGDL + + + ++ E+
Sbjct: 54 SEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFV 113
Query: 575 RFYVAEVLLALEYLHMLG-----VVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ LAL+ H V++RDLKP N+ + ++ L DF L+
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 25/62 (40%)
Query: 704 SNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
+ FVGT Y++PE + + D W+ G L+EL PF E +
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK 232
Query: 764 LR 765
R
Sbjct: 233 FR 234
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V E G L +K ++F Q +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM-LR 154
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 155 GIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL NILV E+ ++DF L+
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFGLA 161
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 788 PDNR 791
P+ R
Sbjct: 256 PEER 259
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++EY G+L LR ++P +R EQ
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAEL---IGTSCLFALKVMDNDFLVGRKKMPRAQTEREI 523
+G + +L +KLG G G V E G + A+K + D L + M E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
M LDH L L+ T +V E P G L +K F +R Y +V
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 132
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ YL ++RDL N+L+ + + DF L
Sbjct: 133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 167
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE +K + D W FG+ L+E+ YG+ P+ G + L + + R P
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 12/134 (8%)
Query: 502 VMDNDFLVGRKKMPRAQT--EREIMQMLDHPFLPTLFAHFTTEK---FSCLVMEYCPGGD 556
+ DN + ++ +P + +RE+ + + P + +F TEK F + +E C
Sbjct: 45 MFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATL 104
Query: 557 LHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV---REDGHI-- 611
+ QK + E + + L +LH L +V+RDLKP NIL+ G I
Sbjct: 105 QEYVEQKDFAHLGLEPIT--LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKA 162
Query: 612 MLSDFDLSLRCAVN 625
M+SDF L + AV
Sbjct: 163 MISDFGLCKKLAVG 176
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L KLG G G V++ GT+ + A+K + + + AQ +M+ L H
Sbjct: 20 LRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGTMSPEAFLQEAQ----VMKKLRHEK 74
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + + ++ A++ + Y+ +
Sbjct: 75 LVQLYAVVSEEPIY-IVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL+ NILV E+ ++DF L+
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLA 161
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKE 787
D W+FGI L EL GR P+ G N E L V + R P P DL+ K+
Sbjct: 197 DVWSFGILLTELTTKGRVPYPGMVNREVLDQ-VERGYRMPCPPECPESLHDLMCQCWRKD 255
Query: 788 PDNR 791
P+ R
Sbjct: 256 PEER 259
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++EY G+L LR ++P +R EQ
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH-P 530
F+L +K+G G G +YL I T+ A+K+ + + K P+ E +I ++L
Sbjct: 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENV-----KTKHPQLLYESKIYRILQGGT 63
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+P + ++ LVM+ G L L SR S + +++ +E++H
Sbjct: 64 GIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNF-CSRKLSLKTVLMLADQMINRVEFVHS 121
Query: 591 LGVVYRDLKPENILV---REDGHIMLSDFDLS 619
++RD+KP+N L+ R + + DF L+
Sbjct: 122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA 153
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E IM DHP + L T K +V E G L +K ++F Q +
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGM-LR 154
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++YL +G V+RDL NIL+ + +SDF LS
Sbjct: 155 GIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLS 194
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ +PE I S+ D W++GI L+E++ YG P+ N + + V + R P
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI-KAVDEGYRLP 270
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAEL---IGTSCLFALKVMDNDFLVGRKKMPRAQTEREI 523
+G + +L +KLG G G V E G + A+K + D L + M E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
M LDH L L+ T +V E P G L +K F +R Y +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ YL ++RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE +K + D W FG+ L+E+ YG+ P+ G + L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 476 KKLGCGDIGTV-----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
K+LG G+ GTV + +++ T + LK ND + + + E +MQ LD+P
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----AEANVMQQLDNP 431
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
++ + E + LVME G L+ + Q +R ++ V +V + ++YL
Sbjct: 432 YIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE 488
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL N+L+ + +SDF LS
Sbjct: 489 SNFVHRDLAARNVLLVTQHYAKISDFGLS 517
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDET 755
++ APE I S D W+FG+ ++E YG+ P++G E
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R +S A Y ++
Sbjct: 68 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 123
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + + L DF LS
Sbjct: 124 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 82
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + ++ +F + ++L L+Y+H
Sbjct: 83 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK---LTDDHVQFLIYQILRGLKYIHS 139
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + DF L+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLA 168
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 171 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 230
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 231 ILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 290
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 291 KRITAAQALA----HAYF 304
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 23/179 (12%)
Query: 453 RWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALK--VMDNDFLVG 510
++D++ C C + ++ K+G G G V+ A T ALK +M+N+
Sbjct: 5 QYDSVEC----PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---- 56
Query: 511 RKKMP-RAQTEREIMQMLDHPFLPTLFAHFTTEKF---SC-----LVMEYCPGGDLHVLR 561
++ P A E +I+Q+L H + L T+ C LV ++C DL L
Sbjct: 57 KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL 115
Query: 562 QKQPSRFFSEQAARFYVAEVLL-ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+F + R V ++LL L Y+H +++RD+K N+L+ DG + L+DF L+
Sbjct: 116 SNVLVKFTLSEIKR--VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++EY G+L LR ++P +R EQ
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 39/173 (22%)
Query: 460 VQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT 519
++K HG +K+G G G VY A+ FALK + L + + T
Sbjct: 1 MEKYHGL---------EKIGEGTYGVVYKAQ-NNYGETFALKKIR---LEKEDEGIPSTT 47
Query: 520 EREI--MQMLDHPFLPTLFAHFTTEKFSCLVMEY-----------CPGGDLHVLRQKQPS 566
REI ++ L H + L+ T+K LV E+ C GG
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG----------- 96
Query: 567 RFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
A+ ++ ++L + Y H V++RDLKP+N+L+ +G + ++DF L+
Sbjct: 97 --LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 39/173 (22%)
Query: 460 VQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT 519
++K HG +K+G G G VY A+ FALK + L + + T
Sbjct: 1 MEKYHGL---------EKIGEGTYGVVYKAQ-NNYGETFALKKIR---LEKEDEGIPSTT 47
Query: 520 EREI--MQMLDHPFLPTLFAHFTTEKFSCLVMEY-----------CPGGDLHVLRQKQPS 566
REI ++ L H + L+ T+K LV E+ C GG
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG----------- 96
Query: 567 RFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
A+ ++ ++L + Y H V++RDLKP+N+L+ +G + ++DF L+
Sbjct: 97 --LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++EY G+L LR ++P +R EQ
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA 204
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAEL---IGTSCLFALKVMDNDFLVGRKKMPRAQTEREI 523
+G + +L +KLG G G V E G + A+K + D L + M E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 68
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
M LDH L L+ T +V E P G L +K F +R Y +V
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 126
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ YL ++RDL N+L+ + + DF L
Sbjct: 127 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 161
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE +K + D W FG+ L+E+ YG+ P+ G + L + + R P
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 83 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 140
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++EY G+L LR ++P +R EQ
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 250
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R +S A Y ++
Sbjct: 70 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 125
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + + L DF LS
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R FS A Y ++
Sbjct: 445 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQL 500
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + L DF LS
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R +S A Y ++
Sbjct: 67 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 122
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + + L DF LS
Sbjct: 123 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 476 KKLGCGDIGTV-----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
K+LG G+ GTV + +++ T + LK ND + + + E +MQ LD+P
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----AEANVMQQLDNP 430
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
++ + E + LVME G L+ + Q +R ++ V +V + ++YL
Sbjct: 431 YIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE 487
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL N+L+ + +SDF LS
Sbjct: 488 SNFVHRDLAARNVLLVTQHYAKISDFGLS 516
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDET 755
++ APE I S D W+FG+ ++E YG+ P++G E
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 476 KKLGCGDIGTV-----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
K+LG G+ GTV + +++ T + LK ND + + + E +MQ LD+P
Sbjct: 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELL----AEANVMQQLDNP 68
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
++ + E + LVME G L+ + Q +R ++ V +V + ++YL
Sbjct: 69 YIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE 125
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL N+L+ + +SDF LS
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLS 154
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDE 754
++ APE I S D W+FG+ ++E YG+ P++G E
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E +MQ LD+P++ + E + LVME G L+ + Q +R ++ V
Sbjct: 56 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 112
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V + ++YL V+RDL N+L+ + +SDF LS
Sbjct: 113 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 152
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDE 754
++ APE I S D W+FG+ ++E YG+ P++G E
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E +MQ LD+P++ + E + LVME G L+ + Q +R ++ V
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 118
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V + ++YL V+RDL N+L+ + +SDF LS
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDE 754
++ APE I S D W+FG+ ++E YG+ P++G E
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 520 EREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVA 579
E +MQ LD+P++ + E + LVME G L+ + Q +R ++ V
Sbjct: 62 EANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVH 118
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V + ++YL V+RDL N+L+ + +SDF LS
Sbjct: 119 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 158
Score = 34.7 bits (78), Expect = 0.24, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDE 754
++ APE I S D W+FG+ ++E YG+ P++G E
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + D L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLA 172
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 76/173 (43%), Gaps = 39/173 (22%)
Query: 460 VQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQT 519
++K HG +K+G G G VY A+ FALK + L + + T
Sbjct: 1 MEKYHGL---------EKIGEGTYGVVYKAQ-NNYGETFALKKIR---LEKEDEGIPSTT 47
Query: 520 EREI--MQMLDHPFLPTLFAHFTTEKFSCLVMEY-----------CPGGDLHVLRQKQPS 566
REI ++ L H + L+ T+K LV E+ C GG
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG----------- 96
Query: 567 RFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
A+ ++ ++L + Y H V++RDLKP+N+L+ +G + ++DF L+
Sbjct: 97 --LESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + D L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLA 172
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAEL---IGTSCLFALKVMDNDFLVGRKKMPRAQTEREI 523
+G + +L +KLG G G V E G + A+K + D L + M E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
M LDH L L+ T +V E P G L +K F +R Y +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ YL ++RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE +K + D W FG+ L+E+ YG+ P+ G + L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 63/155 (40%), Gaps = 5/155 (3%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAEL---IGTSCLFALKVMDNDFLVGRKKMPRAQTEREI 523
+G + +L +KLG G G V E G + A+K + D L + M E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 64
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLL 583
M LDH L L+ T +V E P G L +K F +R Y +V
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQVAE 122
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ YL ++RDL N+L+ + + DF L
Sbjct: 123 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL 157
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE +K + D W FG+ L+E+ YG+ P+ G + L + + R P
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R +S A Y ++
Sbjct: 93 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 148
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + + L DF LS
Sbjct: 149 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R FS A Y ++
Sbjct: 65 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQL 120
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + L DF LS
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R +S A Y ++
Sbjct: 62 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 117
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + + L DF LS
Sbjct: 118 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R +S A Y ++
Sbjct: 65 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 120
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + + L DF LS
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF--YVAEV 581
M+ DHP + L TE ++ME C G+L Q R +S A Y ++
Sbjct: 65 MRQFDHPHIVKLIG-VITENPVWIIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQL 120
Query: 582 LLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
AL YL V+RD+ N+LV + + L DF LS
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFE-LLYGRTPFKGSGNDETLSNV 759
+++APE I S+ D W FG+ ++E L++G PF+G N++ + +
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 23/179 (12%)
Query: 453 RWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALK--VMDNDFLVG 510
++D++ C C + ++ K+G G G V+ A T ALK +M+N+
Sbjct: 5 QYDSVEC----PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---- 56
Query: 511 RKKMP-RAQTEREIMQMLDHPFLPTLFAHFTTE-------KFSC-LVMEYCPGGDLHVLR 561
++ P A E +I+Q+L H + L T+ K S LV ++C DL L
Sbjct: 57 KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEH-DLAGLL 115
Query: 562 QKQPSRFFSEQAARFYVAEVLL-ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+F + R V ++LL L Y+H +++RD+K N+L+ DG + L+DF L+
Sbjct: 116 SNVLVKFTLSEIKR--VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 34/138 (24%)
Query: 700 TGARSNSFVGTHEYLAPEIIKGEGH-GSSVDWWTFGIFLFELLYGRTPFKGSGN------ 752
T +V T Y APEI+ H +VD W+ G + ELL GRT F G+ +
Sbjct: 175 TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKL 234
Query: 753 ---------DETLSNVVSQSLR-----FPGYPVVSFH---------ARDLIRGLLVKEPD 789
E L + S+S R P ++F A DL+ +LV + D
Sbjct: 235 ILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSD 294
Query: 790 NRLGAVKGAAEIKQHPFF 807
R+ A + A H +F
Sbjct: 295 KRITAAQALA----HAYF 308
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 13/149 (8%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVMDNDF--LVGRKKMPRAQTEREIMQMLDHPFLPTL 535
+G G G+V A T A+K + F ++ K+ R E +++ + H + L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR---ELRLLKHMKHENVIGL 86
Query: 536 FAHFT----TEKFS-CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
FT E+F+ ++ + G DL+ + + Q ++ +F + ++L L+Y+H
Sbjct: 87 LDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK---LTDDHVQFLIYQILRGLKYIHS 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++RDLKP N+ V ED + + D L+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLA 172
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 26/152 (17%)
Query: 671 LLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHG----- 725
L V + I +A Q+ P + T +S VGT Y+ PE IK
Sbjct: 142 FLIVDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 195
Query: 726 ------SSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV---SQSLRFPGYPVVSFHA 776
D W+ G L+ + YG+TPF+ N + + + + + FP P
Sbjct: 196 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL-- 253
Query: 777 RDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+D+++ L ++P R+ E+ HP+ +
Sbjct: 254 QDVLKCCLKRDPKQRI----SIPELLAHPYVQ 281
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
L+ + T+++ +VME C DL+ +K+ S + Y +L A+ +H G+V
Sbjct: 77 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIV 133
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+ DLKP N L+ DG + L DF ++
Sbjct: 134 HSDLKPANFLIV-DGMLKLIDFGIA 157
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 465 GCMGMR---HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTER 521
G M +R ++L +K+G G G +YL I A+K+ + K P+ E
Sbjct: 1 GSMELRVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLE-----CVKTKHPQLHIES 55
Query: 522 EIMQMLDHPF-LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAE 580
+I +M+ +PT+ ++ +VME G L L SR FS + +
Sbjct: 56 KIYKMMQGGVGIPTIRWCGAEGDYNVMVME-LLGPSLEDLFN-FCSRKFSLKTVLLLADQ 113
Query: 581 VLLALEYLHMLGVVYRDLKPENILV---REDGHIMLSDFDLS 619
++ +EY+H ++RD+KP+N L+ ++ + + DF L+
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 26 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 83
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++EY G+L LR ++P +R EQ
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 193
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%)
Query: 518 QTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFY 577
Q E + ++ +HP + A F + +V + G L +E A +
Sbjct: 58 QGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI 117
Query: 578 VAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLS 614
+ VL AL+Y+H +G V+R +K +IL+ DG + LS
Sbjct: 118 LQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 154
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 26/152 (17%)
Query: 671 LLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHG----- 725
L V + I +A Q+ P + T +S VGT Y+ PE IK
Sbjct: 186 FLIVDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 239
Query: 726 ------SSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV---SQSLRFPGYPVVSFHA 776
D W+ G L+ + YG+TPF+ N + + + + + FP P
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL-- 297
Query: 777 RDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+D+++ L ++P R+ E+ HP+ +
Sbjct: 298 QDVLKCCLKRDPKQRI----SIPELLAHPYVQ 325
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
L+ + T+++ +VME C DL+ +K+ S + Y +L A+ +H G+V
Sbjct: 121 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+ DLKP N L+ DG + L DF ++
Sbjct: 178 HSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 24 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 81
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++EY G+L LR ++P +R EQ
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA 191
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 64/163 (39%), Gaps = 25/163 (15%)
Query: 470 RHFKLHKKLGCGDIGTV----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
R+ K + LG G G V Y GT + A+K + D G + + E +I++
Sbjct: 31 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILR 88
Query: 526 MLDHPFLPTLFAHFTTEKFSC---------LVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
L H H K C LVMEY P G L R P
Sbjct: 89 TLYH-------EHIIKYKGCCEDAGAASLQLVMEYVPLGSL---RDYLPRHSIGLAQLLL 138
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ + YLH ++RDL N+L+ D + + DF L+
Sbjct: 139 FAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA 181
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 29 LTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 86
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++EY G+L LR ++P +R EQ
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 196
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 26/152 (17%)
Query: 671 LLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHG----- 725
L V + I +A Q+ P + T +S VGT Y+ PE IK
Sbjct: 138 FLIVDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 191
Query: 726 ------SSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV---SQSLRFPGYPVVSFHA 776
D W+ G L+ + YG+TPF+ N + + + + + FP P
Sbjct: 192 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL-- 249
Query: 777 RDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+D+++ L ++P R+ E+ HP+ +
Sbjct: 250 QDVLKCCLKRDPKQRI----SIPELLAHPYVQ 277
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
L+ + T+++ +VME C DL+ +K+ S + Y +L A+ +H G+V
Sbjct: 73 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIV 129
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+ DLKP N L+ DG + L DF ++
Sbjct: 130 HSDLKPANFLIV-DGMLKLIDFGIA 153
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 86/179 (48%), Gaps = 23/179 (12%)
Query: 453 RWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALK--VMDNDFLVG 510
++D++ C C + ++ K+G G G V+ A T ALK +M+N+
Sbjct: 5 QYDSVEC----PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---- 56
Query: 511 RKKMP-RAQTEREIMQMLDHPFLPTLFAHFTTE-------KFSC-LVMEYCPGGDLHVLR 561
++ P A E +I+Q+L H + L T+ K S LV ++C DL L
Sbjct: 57 KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL 115
Query: 562 QKQPSRFFSEQAARFYVAEVLL-ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+F + R V ++LL L Y+H +++RD+K N+L+ DG + L+DF L+
Sbjct: 116 SNVLVKFTLSEIKR--VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L P + L+ + + ME GG L L ++ E A +Y+ + L LE
Sbjct: 107 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLE 164
Query: 587 YLHMLGVVYRDLKPENILVREDG-HIMLSDFDLSL 620
YLH +++ D+K +N+L+ DG L DF +L
Sbjct: 165 YLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 199
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 709 GTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
GT ++APE++ G+ + VD W+ + +L G P+
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%)
Query: 518 QTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFY 577
Q E + ++ +HP + A F + +V + G L +E A +
Sbjct: 74 QGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYI 133
Query: 578 VAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLS 614
+ VL AL+Y+H +G V+R +K +IL+ DG + LS
Sbjct: 134 LQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLS 170
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI--MQMLDH 529
F+L LG G G V A T + A+K ++ K + +T REI ++ H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP----FDKPLFALRTLREIKILKHFKH 68
Query: 530 PFLPTLFAHFTTEKFS----CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
+ T+F + F +++ DLH + Q S+ ++++ + L A+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAV 125
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ LH V++RDLKP N+L+ + + + DF L+
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 37/144 (25%)
Query: 698 EPTGARS--NSFVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSG--- 751
EPTG +S V T Y APE+ + + ++D W+ G L EL R F G
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 752 -------------NDETLSNVVSQSLR--------FPGYPVVSFHAR------DLIRGLL 784
+D L + S R +P P+ R DL++ +L
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML 290
Query: 785 VKEPDNRLGAVKGAAEIKQHPFFE 808
V +P R+ A E +HP+ +
Sbjct: 291 VFDPAKRI----TAKEALEHPYLQ 310
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++EY G+L LR ++P +R EQ
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
+L K+LG G G V++ G + + A+K + + + AQ IM+ L H
Sbjct: 11 LQLIKRLGNGQFGEVWMGTWNGNTKV-AIKTLKPGTMSPESFLEEAQ----IMKKLKHDK 65
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L+A + E +V EY G L + R A+V + Y+ +
Sbjct: 66 LVQLYAVVSEEPIY-IVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM 124
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV ++DF L+
Sbjct: 125 NYIHRDLRSANILVGNGLICKIADFGLA 152
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 729 DWWTFGIFLFELLY-GRTPFKGSGNDETLSNVVSQSLRFP 767
D W+FGI L EL+ GR P+ G N E L V + R P
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVLEQ-VERGYRMP 226
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI--MQMLDH 529
F+L LG G G V A T + A+K ++ K + +T REI ++ H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP----FDKPLFALRTLREIKILKHFKH 68
Query: 530 PFLPTLFAHFTTEKFS----CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
+ T+F + F +++ DLH + Q S+ ++++ + L A+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAV 125
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ LH V++RDLKP N+L+ + + + DF L+
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 37/144 (25%)
Query: 698 EPTGARSN--SFVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSG--- 751
EPTG +S FV T Y APE+ + + ++D W+ G L EL R F G
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 752 -------------NDETLSNVVSQSLR--------FPGYPVVSFHAR------DLIRGLL 784
+D L + S R +P P+ R DL++ +L
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML 290
Query: 785 VKEPDNRLGAVKGAAEIKQHPFFE 808
V +P R+ A E +HP+ +
Sbjct: 291 VFDPAKRI----TAKEALEHPYLQ 310
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 26/152 (17%)
Query: 671 LLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHG----- 725
L V + I +A Q+ P + T +S VGT Y+ PE IK
Sbjct: 158 FLIVDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 726 ------SSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV---SQSLRFPGYPVVSFHA 776
D W+ G L+ + YG+TPF+ N + + + + + FP P
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL-- 269
Query: 777 RDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+D+++ L ++P R+ E+ HP+ +
Sbjct: 270 QDVLKCCLKRDPKQRI----SIPELLAHPYVQ 297
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
L+ + T+++ +VME C DL+ +K+ S + Y +L A+ +H G+V
Sbjct: 93 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+ DLKP N L+ DG + L DF ++
Sbjct: 150 HSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 13/154 (8%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI--MQMLDH 529
F+L LG G G V A T + A+K ++ K + +T REI ++ H
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEP----FDKPLFALRTLREIKILKHFKH 68
Query: 530 PFLPTLFAHFTTEKFS----CLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
+ T+F + F +++ DLH + Q S+ ++++ + L A+
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAV 125
Query: 586 EYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ LH V++RDLKP N+L+ + + + DF L+
Sbjct: 126 KVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 37/144 (25%)
Query: 698 EPTGARS--NSFVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSG--- 751
EPTG +S +V T Y APE+ + + ++D W+ G L EL R F G
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 752 -------------NDETLSNVVSQSLR--------FPGYPVVSFHAR------DLIRGLL 784
+D L + S R +P P+ R DL++ +L
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRML 290
Query: 785 VKEPDNRLGAVKGAAEIKQHPFFE 808
V +P R+ A E +HP+ +
Sbjct: 291 VFDPAKRI----TAKEALEHPYLQ 310
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 72/152 (47%), Gaps = 11/152 (7%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
++L +K+G G G +YL I A+K+ + K P+ E +I +M+
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLE-----CVKTKHPQLHIESKIYKMMQGGV 63
Query: 532 -LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
+PT+ ++ +VME G L L SR FS + +++ +EY+H
Sbjct: 64 GIPTIRWCGAEGDYNVMVME-LLGPSLEDLFN-FCSRKFSLKTVLLLADQMISRIEYIHS 121
Query: 591 LGVVYRDLKPENILV---REDGHIMLSDFDLS 619
++RD+KP+N L+ ++ + + DF L+
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L P + L+ + + ME GG L L ++ E A +Y+ + L LE
Sbjct: 123 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLE 180
Query: 587 YLHMLGVVYRDLKPENILVREDG-HIMLSDFDLSL 620
YLH +++ D+K +N+L+ DG L DF +L
Sbjct: 181 YLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 215
Score = 29.3 bits (64), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 709 GTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPF 747
GT ++APE++ G+ + VD W+ + +L G P+
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
L P + L+ + + ME GG L L ++ E A +Y+ + L LE
Sbjct: 121 LSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLE 178
Query: 587 YLHMLGVVYRDLKPENILVREDG-HIMLSDFDLSL 620
YLH +++ D+K +N+L+ DG L DF +L
Sbjct: 179 YLHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL 213
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 26/152 (17%)
Query: 671 LLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHG----- 725
L V + I +A Q+ P + T +S VGT Y+ PE IK
Sbjct: 139 FLIVDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 192
Query: 726 ------SSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV---SQSLRFPGYPVVSFHA 776
D W+ G L+ + YG+TPF+ N + + + + + FP P
Sbjct: 193 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL-- 250
Query: 777 RDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+D+++ L ++P R+ E+ HP+ +
Sbjct: 251 QDVLKCCLKRDPKQRI----SIPELLAHPYVQ 278
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
L+ + T+++ +VME C DL+ +K+ S + Y +L A+ +H G+V
Sbjct: 74 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIV 130
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+ DLKP N L+ DG + L DF ++
Sbjct: 131 HSDLKPANFLIV-DGMLKLIDFGIA 154
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 23/179 (12%)
Query: 453 RWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALK--VMDNDFLVG 510
++D++ C C + ++ K+G G G V+ A T ALK +M+N+
Sbjct: 4 QYDSVEC----PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE---- 55
Query: 511 RKKMP-RAQTEREIMQMLDHPFLPTLFAHFTTEKF---SC-----LVMEYCPGGDLHVLR 561
++ P A E +I+Q+L H + L T+ C LV ++C DL L
Sbjct: 56 KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLL 114
Query: 562 QKQPSRFFSEQAARFYVAEVLL-ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+F + R V ++LL L Y+H +++RD+K N+L+ DG + L+DF L+
Sbjct: 115 SNVLVKFTLSEIKR--VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 8/148 (5%)
Query: 476 KKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
K LG G GTVY + A+K+++ G K E IM +DHP
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKANVEFMDEALIMASMDHPH 101
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L + LV + P G L + S Q + ++ + YL
Sbjct: 102 LVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS-QLLLNWCVQIAKGMMYLEER 159
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 160 RLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML---------GVVYRD 597
LVMEY P G L S + S + R V L YLH + +RD
Sbjct: 89 LVMEYYPNGSLXKYLSLHTSDWVS--SCRL-AHSVTRGLAYLHTELPRGDHYKPAISHRD 145
Query: 598 LKPENILVREDGHIMLSDFDLSLRCAVNPM 627
L N+LV+ DG ++SDF LS+R N +
Sbjct: 146 LNSRNVLVKNDGTCVISDFGLSMRLTGNRL 175
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D + + +E E+M
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEEDLSDLVSEMEMM 94
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++EY G+L LR ++P +R EQ
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 26/152 (17%)
Query: 671 LLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHG----- 725
L V + I +A Q+ P + T +S VGT Y+ PE IK
Sbjct: 186 FLIVDGMLKLIDFGIANQMQP------DTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 239
Query: 726 ------SSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV---SQSLRFPGYPVVSFHA 776
D W+ G L+ + YG+TPF+ N + + + + + FP P
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL-- 297
Query: 777 RDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+D+++ L ++P R+ E+ HP+ +
Sbjct: 298 QDVLKCCLKRDPKQRI----SIPELLAHPYVQ 325
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
L+ + T+++ +VME C DL+ +K+ S + Y +L A+ +H G+V
Sbjct: 121 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+ DLKP N L+ DG + L DF ++
Sbjct: 178 HSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 476 KKLGCGDIGTV-----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
K+LG G+ GTV + +++ T + LK ND + + + A +MQ LD+P
Sbjct: 31 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN----VMQQLDNP 86
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
++ + E + LVME G L+ + Q +R ++ V +V + ++YL
Sbjct: 87 YIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE 143
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL N+L+ + +SDF LS
Sbjct: 144 SNFVHRDLAARNVLLVTQHYAKISDFGLS 172
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDET 755
++ APE I S D W+FG+ ++E YG+ P++G E
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Query: 519 TEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYV 578
E +MQ LD+P++ + E + LVME G L+ + Q +R ++ V
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELV 123
Query: 579 AEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V + ++YL V+RDL N+L+ + +SDF LS
Sbjct: 124 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLS 164
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDET 755
++ APE I S D W+FG+ ++E YG+ P++G E
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 63/152 (41%), Gaps = 26/152 (17%)
Query: 671 LLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHG----- 725
L V + I +A Q+ P VV+ +S VGT Y+ PE IK
Sbjct: 158 FLIVDGMLKLIDFGIANQMQPDXXXVVK------DSQVGTVNYMPPEAIKDMSSSRENGK 211
Query: 726 ------SSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV---SQSLRFPGYPVVSFHA 776
D W+ G L+ + YG+TPF+ N + + + + + FP P
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL-- 269
Query: 777 RDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+D+++ L ++P R+ E+ HP+ +
Sbjct: 270 QDVLKCCLKRDPKQRI----SIPELLAHPYVQ 297
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
L+ + T+++ +VME C DL+ +K+ S + Y +L A+ +H G+V
Sbjct: 93 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIV 149
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+ DLKP N L+ DG + L DF ++
Sbjct: 150 HSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGR---------KKMPRAQTERE 522
+ L +KLG G TV+LA+ + + A+K++ D + +++ A +E
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 523 -------IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAAR 575
I+++LDH F H +++ G +L L +K R +
Sbjct: 81 DSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 576 FYVAEVLLALEYLHM-LGVVYRDLKPENILV 605
++LL L+Y+H G+++ D+KPEN+L+
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFK------GSGNDETLSNVV- 760
+ T EY +PE++ G G D W+ +FEL+ G F+ + +D+ ++ ++
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 761 ------SQSLRFPGYPVVSFHARDLIRGL 783
S LR Y F++R L+R +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
L+ + T+++ +VME C DL+ +K+ S + Y +L A+ +H G+V
Sbjct: 121 LYDYEITDQYIYMVME-CGNIDLNSWLKKKKS--IDPWERKSYWKNMLEAVHTIHQHGIV 177
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+ DLKP N L+ DG + L DF ++
Sbjct: 178 HSDLKPANFLIV-DGMLKLIDFGIA 201
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 26/152 (17%)
Query: 671 LLSVAAKSRKIKSDLAAQVSPMPQLVVEPTGARSNSFVGTHEYLAPEIIKGEGHG----- 725
L V + I +A Q+ P + T +S VG Y+ PE IK
Sbjct: 186 FLIVDGMLKLIDFGIANQMQP------DTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGK 239
Query: 726 ------SSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV---SQSLRFPGYPVVSFHA 776
D W+ G L+ + YG+TPF+ N + + + + + FP P
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDL-- 297
Query: 777 RDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
+D+++ L ++P R+ E+ HP+ +
Sbjct: 298 QDVLKCCLKRDPKQRI----SIPELLAHPYVQ 325
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 476 KKLGCGDIGTV-----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
K+LG G+ GTV + +++ T + LK ND + + + A +MQ LD+P
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN----VMQQLDNP 88
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
++ + E + LVME G L+ + Q +R ++ V +V + ++YL
Sbjct: 89 YIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE 145
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL N+L+ + +SDF LS
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLS 174
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDET 755
++ APE I S D W+FG+ ++E YG+ P++G E
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 476 KKLGCGDIGTV-----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHP 530
K+LG G+ GTV + +++ T + LK ND + + + A +MQ LD+P
Sbjct: 33 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEAN----VMQQLDNP 88
Query: 531 FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM 590
++ + E + LVME G L+ + Q +R ++ V +V + ++YL
Sbjct: 89 YIVRMIGICEAESW-MLVMEMAELGPLN--KYLQQNRHVKDKNIIELVHQVSMGMKYLEE 145
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
V+RDL N+L+ + +SDF LS
Sbjct: 146 SNFVHRDLAARNVLLVTQHYAKISDFGLS 174
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDET 755
++ APE I S D W+FG+ ++E YG+ P++G E
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGR---------KKMPRAQTERE 522
+ L +KLG G TV+LA+ + + A+K++ D + +++ A +E
Sbjct: 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKE 80
Query: 523 -------IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAAR 575
I+++LDH F H +++ G +L L +K R +
Sbjct: 81 DSMGANHILKLLDH------FNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 576 FYVAEVLLALEYLHM-LGVVYRDLKPENILV 605
++LL L+Y+H G+++ D+KPEN+L+
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLM 165
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 13/89 (14%)
Query: 708 VGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFK------GSGNDETLSNVV- 760
+ T EY +PE++ G G D W+ +FEL+ G F+ + +D+ ++ ++
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIE 255
Query: 761 ------SQSLRFPGYPVVSFHARDLIRGL 783
S LR Y F++R L+R +
Sbjct: 256 LLGELPSYLLRNGKYTRTFFNSRGLLRNI 284
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 6/156 (3%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL KKLG G G V++A A+K M G + E +M+ L H
Sbjct: 184 LKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKP----GSMSVEAFLAEANVMKTLQHDK 238
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L A T E + G L L+ + S+ + F A++ + ++
Sbjct: 239 LVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF-SAQIAEGMAFIEQR 297
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNPM 627
++RDL+ NILV ++DF L+ A P+
Sbjct: 298 NYIHRDLRAANILVSASLVCKIADFGLARVGAKFPI 333
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
++ APE I D W+FGI L E++ YGR P+ G N E + + + R P
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RALERGYRMP 389
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQML 527
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 528 DHPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
F + L F L++E P DL ++ + E+ AR + +VL A
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA--LQEELARSFFWQVLEA 126
Query: 585 LEYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ + H GV++RD+K ENIL+ + G + L DF
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 228
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 229 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 263
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 568 FFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +E + + +L+ ++Y+H G+++RDLKP N LV +D + + DF L+
Sbjct: 152 YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLA 203
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 143
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 244
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 245 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 279
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 70/170 (41%), Gaps = 28/170 (16%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
GM FK + +G G G V+ A+ ++ +++ R K + ERE+ +
Sbjct: 9 FGM-DFKEIELIGSGGFGQVFKAKH---------RIDGKTYVIKRVKYNNEKAEREVKAL 58
Query: 527 --LDHPFL--------------PTLFAHFTTEKFSCLV--MEYCPGGDLHVLRQKQPSRF 568
LDH + T + + K CL ME+C G L +K+
Sbjct: 59 AKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
+ A ++ ++Y+H ++ RDLKP NI + + + + DF L
Sbjct: 119 LDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 19/97 (19%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELL------YGRTPFKGSGNDE 754
G R S GT Y++PE I + +G VD + G+ L ELL + + F D
Sbjct: 176 GKRXRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 234
Query: 755 TLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+S++ + + L++ LL K+P++R
Sbjct: 235 IISDIFDKK------------EKTLLQKLLSKKPEDR 259
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 85 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 142
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 243
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 244 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 278
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL KKLG G G V++A A+K M G + E +M+ L H
Sbjct: 190 LKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKP----GSMSVEAFLAEANVMKTLQHDK 244
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L A T E + G L L+ + S+ + F A++ + ++
Sbjct: 245 LVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF-SAQIAEGMAFIEQR 303
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV ++DF L+
Sbjct: 304 NYIHRDLRAANILVSASLVCKIADFGLA 331
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
++ APE I D W+FGI L E++ YGR P+ G N E + + + R P
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RALERGYRMP 405
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 8/163 (4%)
Query: 461 QKQHGCMGMRHFKLHKKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPR 516
Q Q + K K LG G GTVY + A+K+++ G K
Sbjct: 6 QAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET--TGPKANVE 63
Query: 517 AQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
E IM +DHP L L + LV + P G L + S Q
Sbjct: 64 FMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGS-QLLLN 121
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ + YL +V+RDL N+LV+ H+ ++DF L+
Sbjct: 122 WCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 143
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 244
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 245 QR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 279
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 104
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 105 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 162
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 163 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 194
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 206 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 263
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 264 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 298
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 25 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 84
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 85 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 142
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 143 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 174
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 186 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 243
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 244 QR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 278
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL KKLG G G V++A A+K M G + E +M+ L H
Sbjct: 17 LKLEKKLGAGQFGEVWMATY-NKHTKVAVKTMKP----GSMSVEAFLAEANVMKTLQHDK 71
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
L L A T E + G L L+ + S+ + F A++ + ++
Sbjct: 72 LVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF-SAQIAEGMAFIEQR 130
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV ++DF L+
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLA 158
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
++ APE I D W+FGI L E++ YGR P+ G N E + + + R P
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI-RALERGYRMP 232
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 156
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFR 257
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 258 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 292
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQML 527
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 528 DHPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
F + L F L++E P DL ++ + E+ AR + +VL A
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEA 127
Query: 585 LEYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ + H GV++RD+K ENIL+ + G + L DF
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 229
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 230 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 264
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++ Y G+L LR ++P +R EQ
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 155
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 256
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 257 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 291
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 26 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 85
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 86 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 143
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 144 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 175
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 187 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 244
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 245 QR------VSXECQHLIRWCLALRPXDR----PTFEEIQNHPWMQ 279
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 156
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFR 257
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 258 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 292
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 58 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 117
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 118 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 175
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 176 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 207
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 219 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 276
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 277 QR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 311
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQML 527
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 9 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 68
Query: 528 DHPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
F + L F L++E P DL ++ + E+ AR + +VL A
Sbjct: 69 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEA 126
Query: 585 LEYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ + H GV++RD+K ENIL+ + G + L DF
Sbjct: 127 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 159
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 228
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 229 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 263
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 170
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 271
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 272 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 306
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 155
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFR 256
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 257 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 291
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 156
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFR 257
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 258 QR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 292
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 39 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 98
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 99 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 156
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 157 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 188
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFR 257
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 258 QR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 292
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 155
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFR 256
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 257 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 291
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 38 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 97
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 98 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 155
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 156 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 187
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFR 256
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 257 QR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 291
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 543 KFSCLV--MEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKP 600
K CL ME+C G L +K+ + A ++ ++Y+H +++RDLKP
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKP 164
Query: 601 ENILVREDGHIMLSDFDL 618
NI + + + + DF L
Sbjct: 165 SNIFLVDTKQVKIGDFGL 182
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELL------YGRTPFKGSGNDE 754
G R+ S GT Y++PE I + +G VD + G+ L ELL + + F D
Sbjct: 190 GKRTRS-KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 248
Query: 755 TLSNVVSQSLRFPGYPVVSFHARDLIRGLLVKEPDNR 791
+S++ + + L++ LL K+P++R
Sbjct: 249 IISDIFDKK------------EKTLLQKLLSKKPEDR 273
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 709 GTHEYLAPEIIKGEG--HGSSVDWWTFGIFLFELLYGRTPFKGSGN-DETLSNVVSQSLR 765
GT+E++ PE E +G+ VD W+ GI L+ + Y PF + E +N+ ++++
Sbjct: 212 GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIE 271
Query: 766 FP 767
+P
Sbjct: 272 YP 273
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 504 DNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDL------ 557
+ND + + K + E +I+ + + + T T ++ EY +
Sbjct: 77 NNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEY 136
Query: 558 HVLRQKQPSRFFSEQAARFYVAEVLLALEYLHM-LGVVYRDLKPENILVREDGHIMLSDF 616
+ K + F Q + + VL + Y+H + +RD+KP NIL+ ++G + LSDF
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+M+ P G L ++ S+ + V ++ + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 135
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQML 527
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 528 DHPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
F + L F L++E P DL ++ + E+ AR + +VL A
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEA 127
Query: 585 LEYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ + H GV++RD+K ENIL+ + G + L DF
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 229
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 230 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 264
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 9/153 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQML 527
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 10 QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 69
Query: 528 DHPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLA 584
F + L F L++E P DL ++ + E+ AR + +VL A
Sbjct: 70 SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEA 127
Query: 585 LEYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ + H GV++RD+K ENIL+ + G + L DF
Sbjct: 128 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 160
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 229
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 230 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 264
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 554 GGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIML 613
G DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + +
Sbjct: 129 GADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKI 185
Query: 614 SDFDLS 619
DF L+
Sbjct: 186 CDFGLA 191
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 53 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 112
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 113 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 170
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 171 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 271
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 272 QR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 306
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGT-------SCLFALKVMDNDFLVGRKKMPRAQTEREIM 524
L K LG G G V +AE +G + A+K++ +D K + +E E+M
Sbjct: 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD--ATEKDLSDLVSEMEMM 94
Query: 525 QML-DHPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQP---------SRFFSEQA 573
+M+ H + L T + +++ Y G+L LR ++P +R EQ
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 574 ARFYVA----EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ +EYL ++RDL N+LV E+ + ++DF L+
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA 204
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+M+ P G L ++ S+ + V ++ + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 138
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 474 LHKKLGCGDIGTVY---LAELIGTSCLFALKVM--DNDFLVGRKKMPRAQTEREIMQMLD 528
L K LG G+ G+V L + GTS A+K M DN ++++ +E M+
Sbjct: 38 LGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNS---SQREIEEFLSEAACMKDFS 94
Query: 529 HPFLPTLFA---HFTTEKFS--CLVMEYCPGGDLHVL----RQKQPSRFFSEQAARFYVA 579
HP + L +++ +++ + GDLH R + + Q ++
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMV 154
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++ L +EYL ++RDL N ++R+D + ++DF LS
Sbjct: 155 DIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 25/163 (15%)
Query: 470 RHFKLHKKLGCGDIGTV----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
R+ K + LG G G V Y GT + A+K + D G + + E +I++
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILR 71
Query: 526 MLDHPFLPTLFAHFTTEKFSC---------LVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
L H H K C LVMEY P G L R P
Sbjct: 72 TLYH-------EHIIKYKGCCEDQGEKSLQLVMEYVPLGSL---RDYLPRHSIGLAQLLL 121
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ + YLH ++R+L N+L+ D + + DF L+
Sbjct: 122 FAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 63/162 (38%), Gaps = 11/162 (6%)
Query: 468 GMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKV-MDNDFLVGRKKMPRAQTERE---- 522
+R F + C I V A G C LK+ + V K + TE++
Sbjct: 22 AVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDF 81
Query: 523 -----IMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFY 577
IM DHP + L T ++ E+ G L ++ +F Q
Sbjct: 82 LSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM- 140
Query: 578 VAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ + ++YL + V+RDL NILV + +SDF LS
Sbjct: 141 LRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS 182
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE I+ S+ D W++GI ++E++ YG P+ N + + N + Q R P
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYRLP 260
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 61/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + +M+ K E +M +D+
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 111 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 168
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 169 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 33 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 92
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 93 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 150
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 151 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 182
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 251
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 252 QR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 286
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+M+ P G L ++ S+ + V ++ + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 136
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
Y+ + LLAL +LH G+V+ D+KP NI + G L DF L
Sbjct: 162 YLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 9 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 68
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 69 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 126
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 127 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 158
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 170 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 227
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 228 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 262
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTS-----CLFALKVMDNDFLVGRKKMPRAQTEREIM 524
R L ++LG G G V+LAE S L A+K + + L RK R E E++
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR---EAELL 71
Query: 525 QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-----------VLRQKQPSRFFSEQ- 572
L H + + +V EY GDL+ +L QP + E
Sbjct: 72 TNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELG 131
Query: 573 -AARFYVA-EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++A ++ + YL V+RDL N LV + + + DF +S
Sbjct: 132 LSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 708 VGTH-----EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVS 761
VG H ++ PE I + D W+FG+ L+E+ YG+ P+ N E + ++
Sbjct: 191 VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVI-ECIT 249
Query: 762 QSLRFPGYPVVSFHARDLIRGLLVKEPDNRL 792
Q V D++ G +EP RL
Sbjct: 250 QGRVLERPRVCPKEVYDVMLGCWQREPQQRL 280
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVR 606
L+ME+ P G L K ++ +Q + Y ++ ++YL V+RDL N+LV
Sbjct: 102 LIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDYLGSRQYVHRDLAARNVLVE 160
Query: 607 EDGHIMLSDFDLS 619
+ + + DF L+
Sbjct: 161 SEHQVKIGDFGLT 173
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 123
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 124 RHCHNXGVLHRDIKDENILIDLNRGELKLIDF 155
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 224
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 225 QR------VSXECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 259
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 76/162 (46%), Gaps = 14/162 (8%)
Query: 465 GCMGMR---HFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTER 521
G M +R ++L +K+G G G +YL I + A+K+ + K P+ E
Sbjct: 1 GSMELRVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLE-----CVKTKHPQLHIES 55
Query: 522 EIMQMLDHPF-LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAE 580
+ +M+ +P++ ++ +VME G L L SR FS + +
Sbjct: 56 KFYKMMQGGVGIPSIKWCGAEGDYNVMVME-LLGPSLEDLFN-FCSRKFSLKTVLLLADQ 113
Query: 581 VLLALEYLHMLGVVYRDLKPENILV---REDGHIMLSDFDLS 619
++ +EY+H ++RD+KP+N L+ ++ + + DF L+
Sbjct: 114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 123
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 224
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 225 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 259
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 25/45 (55%)
Query: 699 PTGARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYG 743
P A VGT Y++PE I G + VD ++ G+ LFELLY
Sbjct: 228 PAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS 272
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 584 ALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
A+E+LH G+++RDLKP NI D + + DF L
Sbjct: 176 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 210
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 64/163 (39%), Gaps = 25/163 (15%)
Query: 470 RHFKLHKKLGCGDIGTV----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
R+ K + LG G G V Y GT + A+K + D G + + E +I++
Sbjct: 14 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILR 71
Query: 526 MLDHPFLPTLFAHFTTEKFSC---------LVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
L H H K C LVMEY P G L R P
Sbjct: 72 TLYH-------EHIIKYKGCCEDQGEKSLQLVMEYVPLGSL---RDYLPRHSIGLAQLLL 121
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ + YLH ++R+L N+L+ D + + DF L+
Sbjct: 122 FAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLA 164
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+M+ P G L ++ S+ + V ++ + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 135
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 136 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---RAQTEREIMQMLD 528
+++ LG G G+VY + + A+K ++ D + ++P R E +++ +
Sbjct: 6 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS 65
Query: 529 HPF--LPTLFAHFTTEKFSCLVMEYC-PGGDLHVLRQKQPSRFFSEQAARFYVAEVLLAL 585
F + L F L++E P DL ++ + E+ AR + +VL A+
Sbjct: 66 SGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSFFWQVLEAV 123
Query: 586 EYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
+ H GV++RD+K ENIL+ + G + L DF
Sbjct: 124 RHCHNCGVLHRDIKDENILIDLNRGELKLIDF 155
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 167 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFR 224
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 225 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 259
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 67/171 (39%), Gaps = 27/171 (15%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA--------QTER 521
R L +LG G G V+LAE C L D LV K + A Q E
Sbjct: 41 RDIVLKWELGEGAFGKVFLAE-----CHNLLPEQDK-MLVAVKALKEASESARQDFQREA 94
Query: 522 EIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFF---SEQAA--- 574
E++ ML H + F T + +V EY GDL+ LR P E A
Sbjct: 95 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 154
Query: 575 ------RFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++V + YL L V+RDL N LV + + + DF +S
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFPGYPV 771
++ PE I + D W+FG+ L+E+ YG+ P+ N E + + ++Q
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGRELERPRA 284
Query: 772 VSFHARDLIRGLLVKEPDNR 791
++RG +EP R
Sbjct: 285 CPPEVYAIMRGCWQREPQQR 304
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+M+ P G L ++ S+ + V ++ + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 137
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 547 LVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVR 606
L+ME+ P G L K ++ +Q + Y ++ ++YL V+RDL N+LV
Sbjct: 90 LIMEFLPSGSLKEYLPKNKNKINLKQQLK-YAVQICKGMDYLGSRQYVHRDLAARNVLVE 148
Query: 607 EDGHIMLSDFDLS 619
+ + + DF L+
Sbjct: 149 SEHQVKIGDFGLT 161
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 63/150 (42%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+M+ P G L ++ S+ + V ++ + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 134
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREI-MQMLDHPFLPTL 535
+LG G G V + + + A+K + V ++ R + +I M+ +D PF T
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRA--TVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 536 FAHFTTEKFSCLVMEYCPGGDLHVLRQK-QPSRFFSEQAARFYVAEVLLALEYLH-MLGV 593
+ E + ME +Q + E ++ ALE+LH L V
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 594 VYRDLKPENILVREDGHIMLSDFDLS 619
++RD+KP N+L+ G + + DF +S
Sbjct: 176 IHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 15/153 (9%)
Query: 475 HKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPT 534
K +G G+ G VY L +S + V K + TE++ + L +
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSG-------KKEVPVAIKTLKAGYTEKQRVDFLGEAGIMG 101
Query: 535 LFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQPSRFFSEQAARFYVAEVL-------LALE 586
F+H + ++ +Y P + + +F E+ F V +++ ++
Sbjct: 102 QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMK 161
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
YL + V+RDL NILV + +SDF LS
Sbjct: 162 YLANMNYVHRDLAARNILVNSNLVCKVSDFGLS 194
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE I S+ D W+FGI ++E++ YG P+ N E + ++ R P
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-KAINDGFRLP 270
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 72/171 (42%), Gaps = 16/171 (9%)
Query: 460 VQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP---- 515
VQ H + R +++ K +G G G V A ALK++ N+ R+
Sbjct: 88 VQVPHDHVAYR-YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRI 146
Query: 516 ----RAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSE 571
R Q + M ++ + +FT C+ E +L+ L +K + FS
Sbjct: 147 LEHLRKQDKDNTMNVIH------MLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSL 199
Query: 572 QAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRC 622
R + +L L+ LH +++ DLKPENIL+++ G + D C
Sbjct: 200 PLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
R + + + Y APE+I G +G +D W+ G L ELL G G + L+ ++
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
+ +FT C+ E +L+ L +K + FS R + +L L+ LH ++
Sbjct: 164 MLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 595 YRDLKPENILVREDGHIMLSDFDLSLRC 622
+ DLKPENIL+++ G + D C
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 25/48 (52%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
Y APE+I G +G +D W+ G L ELL G G + L+ ++
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 19/162 (11%)
Query: 474 LHKKLGCGDIGTVYLAELIGT-----SCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLD 528
L ++LG G G V+LAE L A+K + + RK R E E++ L
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR---EAELLTNLQ 73
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFFS---------EQAARFYV 578
H + + +V EY GDL+ LR P Q+ ++
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHI 133
Query: 579 AEVLLA-LEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
A+ + A + YL V+RDL N LV E+ + + DF +S
Sbjct: 134 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 478 LGCGDIGTVYLAELIGTSCLFALKVM---DNDFLVGRKKMPRAQTEREIMQMLDHPFLPT 534
+G G G V T + A+K D+D +V KK+ A E ++++ L H L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMV--KKI--AMREIKLLKQLRHENLVN 88
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
L +K LV E+ L L + P+ Q + Y+ +++ + + H ++
Sbjct: 89 LLEVCKKKKRWYLVFEFVDHTILDDL-ELFPNGL-DYQVVQKYLFQIINGIGFCHSHNII 146
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RD+KPENILV + G + L DF +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFA 171
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 34/138 (24%)
Query: 701 GARSNSFVGTHEYLAPEIIKGE-GHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNV 759
G + V T Y APE++ G+ +G +VD W G + E+ G F G + + L ++
Sbjct: 178 GEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI 237
Query: 760 -------------------VSQSLRFPG----------YPVVSFHARDLIRGLLVKEPDN 790
V +R P YP +S DL + L +PD
Sbjct: 238 MMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDK 297
Query: 791 RLGAVKGAAEIKQHPFFE 808
R AE+ H FF+
Sbjct: 298 R----PFCAELLHHDFFQ 311
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 705 NSFVGTHEYLAPEIIK-GEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQS 763
F GT Y PE I+ HG S W+ GI L++++ G PF+ ++E + V
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFR 271
Query: 764 LRFPGYPVVSFHARDLIRGLLVKEPDNRLGAVKGAAEIKQHPFFE 808
R VS + LIR L P +R EI+ HP+ +
Sbjct: 272 QR------VSSECQHLIRWCLALRPSDR----PTFEEIQNHPWMQ 306
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVRED-GHIMLSDF 616
E+ AR + +VL A+ + H GV++RD+K ENIL+ + G + L DF
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 67/171 (39%), Gaps = 27/171 (15%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA--------QTER 521
R L +LG G G V+LAE C L D LV K + A Q E
Sbjct: 12 RDIVLKWELGEGAFGKVFLAE-----CHNLLPEQDK-MLVAVKALKEASESARQDFQREA 65
Query: 522 EIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFF---SEQAA--- 574
E++ ML H + F T + +V EY GDL+ LR P E A
Sbjct: 66 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 125
Query: 575 ------RFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++V + YL L V+RDL N LV + + + DF +S
Sbjct: 126 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 176
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFPGYPV 771
++ PE I + D W+FG+ L+E+ YG+ P+ N E + + ++Q
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGRELERPRA 255
Query: 772 VSFHARDLIRGLLVKEPDNR 791
++RG +EP R
Sbjct: 256 CPPEVYAIMRGCWQREPQQR 275
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 535 LFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVV 594
+ +FT C+ E +L+ L +K + FS R + +L L+ LH ++
Sbjct: 164 MLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRII 222
Query: 595 YRDLKPENILVREDGHIMLSDFDLSLRC 622
+ DLKPENIL+++ G + D C
Sbjct: 223 HCDLKPENILLKQQGRSGIKVIDFGSSC 250
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 703 RSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
R + + + Y APE+I G +G +D W+ G L ELL G G + L+ ++
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMI 312
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPS----RFFSEQAARFYVAEVLL 583
DHP + + TT++F + +E C ++ K S + E + ++
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 584 ALEYLHMLGVVYRDLKPENILVR-------------EDGHIMLSDFDL 618
+ +LH L +++RDLKP+NILV E+ I++SDF L
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 11/169 (6%)
Query: 455 DAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLAELIG----TSCLFALKVMDNDFLVG 510
+A+R K+ + + + K+ + +G G+ G V L SC+ A+K + +
Sbjct: 4 EAVREFAKE---IDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCV-AIKTLKGGYTER 59
Query: 511 RKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFS 570
+++ +E IM +HP + L T ++ E+ G L + +F
Sbjct: 60 QRR--EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTV 117
Query: 571 EQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
Q + + + YL + V+RDL NILV + +SDF LS
Sbjct: 118 IQLVGM-LRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFPGYP 770
+ APE I S+ D W++GI ++E++ +G P+ N + + N + Q R P P
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI-NAIEQDYRLPPPP 246
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPS----RFFSEQAARFYVAEVLL 583
DHP + + TT++F + +E C ++ K S + E + ++
Sbjct: 85 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 144
Query: 584 ALEYLHMLGVVYRDLKPENILVR-------------EDGHIMLSDFDL 618
+ +LH L +++RDLKP+NILV E+ I++SDF L
Sbjct: 145 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 192
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 67/171 (39%), Gaps = 27/171 (15%)
Query: 470 RHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRA--------QTER 521
R L +LG G G V+LAE C L D LV K + A Q E
Sbjct: 18 RDIVLKWELGEGAFGKVFLAE-----CHNLLPEQDK-MLVAVKALKEASESARQDFQREA 71
Query: 522 EIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQPSRFF---SEQAA--- 574
E++ ML H + F T + +V EY GDL+ LR P E A
Sbjct: 72 ELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 131
Query: 575 ------RFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++V + YL L V+RDL N LV + + + DF +S
Sbjct: 132 LGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 182
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFPGYPV 771
++ PE I + D W+FG+ L+E+ YG+ P+ N E + + ++Q
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAI-DCITQGRELERPRA 261
Query: 772 VSFHARDLIRGLLVKEPDNR 791
++RG +EP R
Sbjct: 262 CPPEVYAIMRGCWQREPQQR 281
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 4/147 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+M+ P G L ++ S+ + V ++ + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 136
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
+V+RDL N+LV+ H+ ++DF
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 576 FYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLA 191
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 708 VGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 25/163 (15%)
Query: 470 RHFKLHKKLGCGDIGTV----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
R+ K + LG G G V Y GT + A+K + G + Q E EI++
Sbjct: 9 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREIEILR 66
Query: 526 MLDHPFLPTLFAHFTTEKFSC---------LVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
L H H K C LVMEY P G L R P
Sbjct: 67 TLYH-------EHIVKYKGCCEDQGEKSVQLVMEYVPLGSL---RDYLPRHCVGLAQLLL 116
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ + YLH ++R L N+L+ D + + DF L+
Sbjct: 117 FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 159
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 4/147 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+M+ P G L ++ S+ + V ++ + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 136
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
+V+RDL N+LV+ H+ ++DF
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 8/148 (5%)
Query: 476 KKLGCGDIGTVYLAELI----GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
K LG G GTVY I A+KV+ + K E +M + P+
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN--TSPKANKEILDEAYVMAGVGSPY 80
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHML 591
+ L T LV + P G L ++ R S+ + ++ + YL +
Sbjct: 81 VSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLN-WCMQIAKGMSYLEDV 138
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 139 RLVHRDLAARNVLVKSPNHVKITDFGLA 166
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 62/163 (38%), Gaps = 25/163 (15%)
Query: 470 RHFKLHKKLGCGDIGTV----YLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQ 525
R+ K + LG G G V Y GT + A+K + G + Q E EI++
Sbjct: 8 RYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREIEILR 65
Query: 526 MLDHPFLPTLFAHFTTEKFSC---------LVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
L H H K C LVMEY P G L R P
Sbjct: 66 TLYH-------EHIVKYKGCCEDQGEKSVQLVMEYVPLGSL---RDYLPRHCVGLAQLLL 115
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ ++ + YLH ++R L N+L+ D + + DF L+
Sbjct: 116 FAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLA 158
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICD 169
Query: 616 FDLS 619
F L+
Sbjct: 170 FGLA 173
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPS----RFFSEQAARFYVAEVLL 583
DHP + + TT++F + +E C ++ K S + E + ++
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 584 ALEYLHMLGVVYRDLKPENILVR-------------EDGHIMLSDFDL 618
+ +LH L +++RDLKP+NILV E+ I++SDF L
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+ + P G L ++ S+ + V ++ + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 134
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 17/108 (15%)
Query: 528 DHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPS----RFFSEQAARFYVAEVLL 583
DHP + + TT++F + +E C ++ K S + E + ++
Sbjct: 67 DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIAS 126
Query: 584 ALEYLHMLGVVYRDLKPENILVR-------------EDGHIMLSDFDL 618
+ +LH L +++RDLKP+NILV E+ I++SDF L
Sbjct: 127 GVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGL 174
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 61/147 (41%), Gaps = 4/147 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+M+ P G L ++ S+ + V ++ + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 138
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
+V+RDL N+LV+ H+ ++DF
Sbjct: 139 DRRLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Query: 473 KLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIM--QMLDH 529
+ ++LG G VY L G + + + L + + P R + E M L H
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH 88
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQP-SRFFSEQAAR------------ 575
P + L T ++ ++ YC GDLH L + P S S R
Sbjct: 89 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 576 FYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
VA++ +EYL VV++DL N+LV + ++ +SD L
Sbjct: 149 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 191
Score = 32.7 bits (73), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++APE I D W++G+ L+E+ YG P+ G N + + +
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 260
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 524 MQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQK-QPSRFFSEQAARFYVAEVL 582
M+ +D PF T + E + ME +Q + E ++
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 119
Query: 583 LALEYLH-MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
ALE+LH L V++RD+KP N+L+ G + + DF +S
Sbjct: 120 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 17/163 (10%)
Query: 473 KLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMP-RAQTEREIM--QMLDH 529
+ ++LG G VY L G + + + L + + P R + E M L H
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQH 71
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQP-SRFFSEQAAR------------ 575
P + L T ++ ++ YC GDLH L + P S S R
Sbjct: 72 PNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 576 FYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
VA++ +EYL VV++DL N+LV + ++ +SD L
Sbjct: 132 HLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGL 174
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++APE I D W++G+ L+E+ YG P+ G N + + +
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI 243
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 8/153 (5%)
Query: 471 HFKLHKKLGCGDIGTVYLAELIG----TSCLFALKVMDNDFLVGRKKMPRAQTEREIMQM 526
+ K+ + +G G+ G V L SC+ A+K + + +++ +E IM
Sbjct: 15 YVKIEEVIGAGEFGEVCRGRLKAPGKKESCV-AIKTLKGGYTERQRR--EFLSEASIMGQ 71
Query: 527 LDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALE 586
+HP + L T ++ E+ G L + +F Q + + +
Sbjct: 72 FEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGM-LRGIASGMR 130
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
YL + V+RDL NILV + +SDF LS
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFPGYP 770
+ APE I S+ D W++GI ++E++ +G P+ N + + N + Q R P P
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVI-NAIEQDYRLPPPP 244
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 23 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 77
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 78 LVRLYAVVTQEPI-YIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 135
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 136 RNYIHRDLRAANILVSDTLSCKIADFGLA 164
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRFP 767
+ APE I+ S+ D W++GI ++E++ YG P+ N + + N + Q R P
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVI-NAIEQDYRLP 234
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 6/150 (4%)
Query: 473 KLHKKLGCGDIGTVYLA--ELIGTSCLF-ALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
K+ + +G G+ G V +L G +F A+K + + + K+ +E IM DH
Sbjct: 10 KIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYT--EKQRRDFLSEASIMGQFDH 67
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T ++ E+ G L ++ +F Q + + ++YL
Sbjct: 68 PNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGM-LRGIAAGMKYLA 126
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ V+R L NILV + +SDF LS
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLS 156
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 616 FDLS 619
F L+
Sbjct: 172 FGLA 175
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 576 FYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLA 171
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 136
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 616 FDLS 619
F L+
Sbjct: 168 FGLA 171
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 83 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 140
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 141 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 141
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 137
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 131 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 187
Query: 616 FDLS 619
F L+
Sbjct: 188 FGLA 191
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 616 FDLS 619
F L+
Sbjct: 170 FGLA 173
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 616 FDLS 619
F L+
Sbjct: 172 FGLA 175
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 708 VGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 116 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 616 FDLS 619
F L+
Sbjct: 173 FGLA 176
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 708 VGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 116 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 172
Query: 616 FDLS 619
F L+
Sbjct: 173 FGLA 176
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K L G GTVY I G + + + K E +M +D+
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+M+ P G L ++ S+ + V ++ + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 141
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 117 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 173
Query: 616 FDLS 619
F L+
Sbjct: 174 FGLA 177
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 108 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 164
Query: 616 FDLS 619
F L+
Sbjct: 165 FGLA 168
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 616 FDLS 619
F L+
Sbjct: 172 FGLA 175
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 576 FYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+++ ++L L+Y+H V++RDLKP N+L+ + + DF L+
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLA 175
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 137
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 616 FDLS 619
F L+
Sbjct: 168 FGLA 171
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 171
Query: 616 FDLS 619
F L+
Sbjct: 172 FGLA 175
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 62/150 (41%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T L+ + P G L ++ S+ + V ++ + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCV-QIAKGMNYLE 134
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 80 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 137
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 138 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 115 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 616 FDLS 619
F L+
Sbjct: 172 FGLA 175
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 134
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 113 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 169
Query: 616 FDLS 619
F L+
Sbjct: 170 FGLA 173
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 25 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 79
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 80 LVRLYAVVTQEPI-YIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 137
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 138 RNYIHRDLRAANILVSDTLSCKIADFGLA 166
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 87 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 144
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 145 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 109 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 616 FDLS 619
F L+
Sbjct: 166 FGLA 169
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICD 167
Query: 616 FDLS 619
F L+
Sbjct: 168 FGLA 171
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 119 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 175
Query: 616 FDLS 619
F L+
Sbjct: 176 FGLA 179
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 111 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 167
Query: 616 FDLS 619
F L+
Sbjct: 168 FGLA 171
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 707 FVGTHEYLAPEI-IKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
+V T Y APEI + +G+ S+D W+ G L E+L R F G + L++++
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 556 DLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
DL+ L + Q S +++ ++L L+Y+H V++RDLKP N+L+ + + D
Sbjct: 109 DLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 165
Query: 616 FDLS 619
F L+
Sbjct: 166 FGLA 169
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 75
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 76 LVRLYAVVTQEPI-YIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 20 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 74
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 75 LVRLYAVVTQEPI-YIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 132
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 133 RNYIHRDLRAANILVSDTLSCKIADFGLA 161
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 180 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 17 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 71
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 72 LVRLYAVVTQEPIY-IITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 129
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 130 RNYIHRDLRAANILVSDTLSCKIADFGLA 158
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 177 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 102 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 159
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 160 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 709 GTHEYLAPEII-KGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDET 755
GT + APE++ K +++D W+ G+ LL GR PF + +D T
Sbjct: 208 GTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLT 255
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV-REDGHIMLSDFDLS 619
S Q R Y+ + AL+ +H G+V+RD+KP N L R L DF L+
Sbjct: 114 LSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLA 165
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 16 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 70
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 71 LVRLYAVVTQEPIY-IITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 128
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 129 RNYIHRDLRAANILVSDTLSCKIADFGLA 157
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 176 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 21 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 75
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 76 LVRLYAVVTQEPI-YIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 133
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 134 RNYIHRDLRAANILVSDTLSCKIADFGLA 162
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQ-------------PSRFFSEQAA 574
HP + L + L +EY P G+L LR+ + + S Q
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 575 RFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ A+V ++YL ++RDL NILV E+ ++DF LS
Sbjct: 145 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 189
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 24 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 78
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 79 LVRLYAVVTQEPI-YIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 136
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 137 RNYIHRDLRAANILVSDTLSCKIADFGLA 165
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 70 LVRLYAVVTQEPIY-IITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 15 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 70 LVRLYAVVTQEPIY-IITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 713 YLAPEIIKGEGHGS---SVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFPGY 769
++APE ++ + + S D W+F + L+EL+ PF N E V + LR
Sbjct: 174 WVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIP 233
Query: 770 PVVSFHARDLIRGLLVKEPDNR 791
P +S H L++ + ++P R
Sbjct: 234 PGISPHVSKLMKICMNEDPAKR 255
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQ-------------PSRFFSEQAA 574
HP + L + L +EY P G+L LR+ + + S Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 575 RFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ A+V ++YL ++RDL NILV E+ ++DF LS
Sbjct: 135 LHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLS 179
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 15 LKLVERLGAGQAGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 69
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 70 LVRLYAVVTQEPI-YIITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 128 RNYIHRDLRAANILVSDTLSCKIADFGLA 156
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 71 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 128
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 129 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 10 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 64
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 65 LVRLYAVVTQEPIY-IITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 122
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL+ NILV + ++DF L+
Sbjct: 123 RNYIHRDLRAANILVSDTLSCKIADFGLA 151
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 170 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 74 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAEGMNYLE 131
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 132 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 705 NSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLS 757
++ V T Y APE+I G D W+ G +FE G T F+ N E L+
Sbjct: 211 STIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 581 VLLALEYLH-MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++ ALE+LH L V++RD+KP N+L+ G + DF +S
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 21/174 (12%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAEL-----IGTS--CLFALKVMDNDFLVGRKKMPRAQT 519
M + +K+ +G G G +YLA++ +G+ C+ ++ DN L K +
Sbjct: 32 MAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAA 91
Query: 520 EREIMQM------LDHPFLPTLFAHFTTEK----FSCLVMEYCPGGDLHVLRQKQPSRFF 569
+ E +Q L + +P + +K + ++M+ G DL + + RF
Sbjct: 92 KPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFS 150
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV--REDGHIMLSDFDLSLR 621
+ + + +L LEY+H V+ D+K N+L+ + + L D+ L+ R
Sbjct: 151 RKTVLQLSL-RILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR 203
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 77/174 (44%), Gaps = 21/174 (12%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAEL-----IGTS--CLFALKVMDNDFLVGRKKMPRAQT 519
M + +K+ +G G G +YLA++ +G+ C+ ++ DN L K +
Sbjct: 32 MAKKEWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAA 91
Query: 520 EREIMQM------LDHPFLPTLFAHFTTEK----FSCLVMEYCPGGDLHVLRQKQPSRFF 569
+ E +Q L + +P + +K + ++M+ G DL + + RF
Sbjct: 92 KPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFS 150
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV--REDGHIMLSDFDLSLR 621
+ + + +L LEY+H V+ D+K N+L+ + + L D+ L+ R
Sbjct: 151 RKTVLQLSL-RILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR 203
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 4/147 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 79 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 136
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
+V+RDL N+LV+ H+ ++DF
Sbjct: 137 DRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 26/179 (14%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLA----------------ELIGTSCLFA-LKVMDNDFLV 509
M + L KK+G G G +YLA E LF+ LK V
Sbjct: 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQR---V 90
Query: 510 GRKKMPRAQTEREIMQMLDHP-FLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF 568
+K + ER+ + L P F + F + +VME G DL + + +
Sbjct: 91 AKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGT-- 147
Query: 569 FSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV--REDGHIMLSDFDLSLRCAVN 625
F + +L LEY+H V+ D+K N+L+ + + L+D+ LS R N
Sbjct: 148 FKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPN 206
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 676 AKSRKIKSDLAAQVSPMPQLVVEPTGARSN----SFVGTHEYLAPEIIKGEGHGSSVDWW 731
A + KIK D ++P ++V + + + V T Y APE+I G D W
Sbjct: 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVW 218
Query: 732 TFGIFLFELLYGRTPFKGSGNDETLS 757
+ G L E G T F + E L+
Sbjct: 219 SIGCILIEYYLGFTVFPTHDSKEHLA 244
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 4/147 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 141
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
+V+RDL N+LV+ H+ ++DF
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 58/147 (39%), Gaps = 4/147 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K LG G GTVY I G + + + K E +M +D+
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 134
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDF 616
+V+RDL N+LV+ H+ ++DF
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 518 QTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQP----SRFFSEQ 572
Q E +M D+P + L K CL+ EY GDL+ LR P S S+
Sbjct: 98 QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 157
Query: 573 AARFYVA-----------------EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSD 615
+ R V+ +V + YL V+RDL N LV E+ + ++D
Sbjct: 158 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIAD 217
Query: 616 FDLS 619
F LS
Sbjct: 218 FGLS 221
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ PE I + + D W +G+ L+E+ YG P+ G ++E + V
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV 289
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HP L +L L+ +Y G+L H+ P+ S + L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
YLH +++RD+K NIL+ E+ ++DF +S
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 463 QHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE 522
++G M +++ +G G G V A A+K++ N + + +AQ E
Sbjct: 28 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVR 83
Query: 523 IMQMLDH------PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
++++++ ++ L HF CLV E +L+ L + R S R
Sbjct: 84 LLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRK 142
Query: 577 YVAEVLLALEYLHM--LGVVYRDLKPENILV 605
+ ++ AL +L L +++ DLKPENIL+
Sbjct: 143 FAQQMCTALLFLATPELSIIHCDLKPENILL 173
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G R + + Y +PE++ G + ++D W+ G L E+ G F G+ + ++ +V
Sbjct: 193 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 36.6 bits (83), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALE 586
HP L +L L+ +Y G+L H+ P+ S + L
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 587 YLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
YLH +++RD+K NIL+ E+ ++DF +S
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 529 HPFLPTLFAHFTTEKFSCLVMEYCPGGDL-HVLRQKQ-------------PSRFFSEQAA 574
HP + L + L +EY P G+L LR+ + + S Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 575 RFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ A+V ++YL ++R+L NILV E+ ++DF LS
Sbjct: 142 LHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLS 186
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 472 FKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
KL ++LG G G V++ G + KV G E +M+ L H
Sbjct: 11 LKLVERLGAGQFGEVWMGYYNGHT-----KVAVKSLKQGSMSPDAFLAEANLMKQLQHQR 65
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRF-FSEQAARFYVAEVLLALEYLHM 590
L L+A T E ++ EY G L V K PS + A++ + ++
Sbjct: 66 LVRLYAVVTQEPIY-IITEYMENGSL-VDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 123
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
++R+L+ NILV + ++DF L+
Sbjct: 124 RNYIHRNLRAANILVSDTLSCKIADFGLA 152
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
++ APE I D W+FGI L E++ +GR P+ G N E + N+
Sbjct: 171 KWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 463 QHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE 522
++G M +++ +G G G V A A+K++ N + + +AQ E
Sbjct: 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVR 102
Query: 523 IMQMLDH------PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
++++++ ++ L HF CLV E +L+ L + R S R
Sbjct: 103 LLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRK 161
Query: 577 YVAEVLLALEYLHM--LGVVYRDLKPENILV 605
+ ++ AL +L L +++ DLKPENIL+
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILL 192
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G R + + Y +PE++ G + ++D W+ G L E+ G F G+ + ++ +V
Sbjct: 212 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 13/151 (8%)
Query: 463 QHGCMGMRHFKLHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTERE 522
++G M +++ +G G G V A A+K++ N + + +AQ E
Sbjct: 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVR 102
Query: 523 IMQMLDH------PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARF 576
++++++ ++ L HF CLV E +L+ L + R S R
Sbjct: 103 LLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRK 161
Query: 577 YVAEVLLALEYLHM--LGVVYRDLKPENILV 605
+ ++ AL +L L +++ DLKPENIL+
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILL 192
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 701 GARSNSFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVV 760
G R + + Y +PE++ G + ++D W+ G L E+ G F G+ + ++ +V
Sbjct: 212 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K L G GTVY I G + + + K E +M +D+
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 84 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 141
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 142 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 35.8 bits (81), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 713 YLAPEIIKGEGHGS---SVDWWTFGIFLFELLYGRTPFKGSGNDETLSNVVSQSLRFPGY 769
++APE ++ + + S D W+F + L+EL+ PF N E V + LR
Sbjct: 174 WVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIP 233
Query: 770 PVVSFHARDLIRGLLVKEPDNR 791
P +S H L + ++P R
Sbjct: 234 PGISPHVSKLXKICXNEDPAKR 255
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 4/150 (2%)
Query: 472 FKLHKKLGCGDIGTVYLAELI--GTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDH 529
FK K L G GTVY I G + + + K E +M +D+
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 530 PFLPTLFAHFTTEKFSCLVMEYCPGGDLHVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
P + L T + G L +R+ + + Q + ++ + YL
Sbjct: 77 PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDN--IGSQYLLNWCVQIAKGMNYLE 134
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+V+RDL N+LV+ H+ ++DF L+
Sbjct: 135 DRRLVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 29/192 (15%)
Query: 455 DAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLA---ELIGTS--CLFALKVMDNDFLV 509
DA + ++ ++ L K LG G+ G V A L G + A+K++ +
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--A 65
Query: 510 GRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQP--- 565
++ +E +++ ++HP + L+ + + L++EY G L LR+ +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 566 ------------------SRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVRE 607
R + + ++ ++YL + +V+RDL NILV E
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAE 185
Query: 608 DGHIMLSDFDLS 619
+ +SDF LS
Sbjct: 186 GRKMKISDFGLS 197
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 23/51 (45%)
Query: 706 SFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+ V T Y PE+I G D W+ G LFE G T F+ N E L
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVV 760
++APE +K +S D W+FG+ L+E+ P++G N++ L V+
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 243
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLR 765
+++APE I + D W++GIFL+EL G +P+ G D ++ + R
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 282
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 32/170 (18%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKM-PRAQ-TEREIMQ-------- 525
K LG G G V A G L D V K + P A TERE +
Sbjct: 45 KTLGAGAFGKVVEATAYG------LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 526 MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGD-LHVLRQKQPSRFFSEQAARF-------- 576
+ +H + L T + ++ EYC GD L+ LR+K+ S S+ +
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 577 -------YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V + +L ++RDL NIL+ + DF L+
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA 208
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 76/174 (43%), Gaps = 21/174 (12%)
Query: 467 MGMRHFKLHKKLGCGDIGTVYLAEL-----IGTS--CLFALKVMDNDFLVGRKKMPRAQT 519
M +K+ +G G G +YLA++ +G+ C+ ++ DN L K +
Sbjct: 32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAA 91
Query: 520 EREIMQM------LDHPFLPTLFAHFTTEK----FSCLVMEYCPGGDLHVLRQKQPSRFF 569
+ E +Q L + +P + +K + ++M+ G DL + + RF
Sbjct: 92 KPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFS 150
Query: 570 SEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILV--REDGHIMLSDFDLSLR 621
+ + + +L LEY+H V+ D+K N+L+ + + L D+ L+ R
Sbjct: 151 RKTVLQLSL-RILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYR 203
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 23/51 (45%)
Query: 706 SFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+ V T Y PE+I G D W+ G LFE G T F+ N E L
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVV 760
++APE +K +S D W+FG+ L+E+ P++G N++ L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLR 765
+++APE I + D W++GIFL+EL G +P+ G D ++ + R
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 266
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 32/170 (18%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKM-PRAQ-TEREIMQ-------- 525
K LG G G V A G L D V K + P A TERE +
Sbjct: 29 KTLGAGAFGKVVEATAYG------LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 526 MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGD-LHVLRQKQPSRFFSEQAARF-------- 576
+ +H + L T + ++ EYC GD L+ LR+K+ S S+ +
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 577 -------YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V + +L ++RDL NIL+ + DF L+
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA 192
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVV 760
++APE +K +S D W+FG+ L+E+ P++G N++ L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 477 KLGCGDIGTVYLAELIGTSCL--FALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPT 534
K+G G G VY A+ +ALK ++ G A E +++ L HP + +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIE-----GTGISMSACREIALLRELKHPNVIS 82
Query: 535 LFAHFTT--EKFSCLVMEYCPGGDLHVLRQKQPSRF------FSEQAARFYVAEVLLALE 586
L F + ++ L+ +Y H+++ + S+ + + ++L +
Sbjct: 83 LQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH 142
Query: 587 YLHMLGVVYRDLKPENILVREDG 609
YLH V++RDLKP NILV +G
Sbjct: 143 YLHANWVLHRDLKPANILVMGEG 165
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Query: 674 VAAKSRKIKSDLAAQVSP--MPQLVVEPTGARSNSFVGTH---EYLAPEIIKGEGHGSSV 728
+AA++ + DL +VS M + V++ S VGT ++ APE+ + S
Sbjct: 130 LAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS---VGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 729 DWWTFGIFLFELL-YGRTPFKGSGNDETLSNV 759
D W FGI ++E+ G+ P+ N E + V
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKV 218
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 16/151 (10%)
Query: 474 LHKKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLP 533
L K+LG G G V L + G + A+K++ + + AQT M L HP L
Sbjct: 12 LLKELGSGQFGVVKLGKWKGQYDV-AVKMIKEGSMSEDEFFQEAQT----MMKLSHPKLV 66
Query: 534 TLFAHFTTEKFSCLVMEYCPGG-DLHVLRQK----QPSRFFSEQAARFYVAEVLLALEYL 588
+ + E +V EY G L+ LR +PS+ +V + +L
Sbjct: 67 KFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEM------CYDVCEGMAFL 120
Query: 589 HMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
++RDL N LV D + +SDF ++
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMT 151
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLR 765
+++APE I + D W++GIFL+EL G +P+ G D ++ + R
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 284
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 32/170 (18%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKM-PRAQ-TEREIMQ-------- 525
K LG G G V A G L D V K + P A TERE +
Sbjct: 47 KTLGAGAFGKVVEATAYG------LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 526 MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGD-LHVLRQKQPSRFFSEQAARF-------- 576
+ +H + L T + ++ EYC GD L+ LR+K+ S S+ +
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 577 -------YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V + +L ++RDL NIL+ + DF L+
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA 210
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVV 760
++APE +K +S D W+FG+ L+E+ P++G N++ L V+
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 245
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLRF 766
+++APE I + + + D W++G+ L+E+ G +P+ G DE + + + +R
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRM 321
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 577 YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLSLRCAVNP 626
Y +V +E+L ++RDL NIL+ E+ + + DF L+ NP
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNP 253
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLR 765
+++APE I + D W++GIFL+EL G +P+ G D ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 289
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 32/170 (18%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKM-PRAQ-TEREIMQ-------- 525
K LG G G V A G L D V K + P A TERE +
Sbjct: 52 KTLGAGAFGKVVEATAYG------LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 526 MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGD-LHVLRQKQPSRFFSEQAARF-------- 576
+ +H + L T + ++ EYC GD L+ LR+K+ S S+ +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 577 -------YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V + +L ++RDL NIL+ + DF L+
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA 215
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVV 760
++APE +K +S D W+FG+ L+E+ P++G N++ L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQSLR 765
+++APE I + D W++GIFL+EL G +P+ G D ++ + R
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 289
Score = 29.3 bits (64), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 65/170 (38%), Gaps = 32/170 (18%)
Query: 476 KKLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKM-PRAQ-TEREIMQ-------- 525
K LG G G V A G L D V K + P A TERE +
Sbjct: 52 KTLGAGAFGKVVEATAYG------LIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 526 MLDHPFLPTLFAHFTTEKFSCLVMEYCPGGD-LHVLRQKQPSRFFSEQAARF-------- 576
+ +H + L T + ++ EYC GD L+ LR+K+ S S+ +
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 577 -------YVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDLS 619
+ +V + +L ++RDL NIL+ + DF L+
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA 215
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVV 760
++APE +K +S D W+FG+ L+E+ P++G N++ L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 29/192 (15%)
Query: 455 DAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLA---ELIGTS--CLFALKVMDNDFLV 509
DA + ++ ++ L K LG G+ G V A L G + A+K++ +
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--A 65
Query: 510 GRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQP--- 565
++ +E +++ ++HP + L+ + + L++EY G L LR+ +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 566 ------------------SRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVRE 607
R + + ++ ++YL + +V+RDL NILV E
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE 185
Query: 608 DGHIMLSDFDLS 619
+ +SDF LS
Sbjct: 186 GRKMKISDFGLS 197
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVV 760
++APE +K +S D W+FG+ L+E+ P++G N++ L V+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 246
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 23/51 (45%)
Query: 706 SFVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYGRTPFKGSGNDETL 756
+ V T Y PE+I G D W+ G LFE G T F+ N E L
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 713 YLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVV 760
++APE +K +S D W+FG+ L+E+ P++G N++ L V+
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 247
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 80/192 (41%), Gaps = 29/192 (15%)
Query: 455 DAIRCVQKQHGCMGMRHFKLHKKLGCGDIGTVYLA---ELIGTS--CLFALKVMDNDFLV 509
DA + ++ ++ L K LG G+ G V A L G + A+K++ +
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--A 65
Query: 510 GRKKMPRAQTEREIMQMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDLH-VLRQKQP--- 565
++ +E +++ ++HP + L+ + + L++EY G L LR+ +
Sbjct: 66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 566 ------------------SRFFSEQAARFYVAEVLLALEYLHMLGVVYRDLKPENILVRE 607
R + + ++ ++YL + +V+RDL NILV E
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAE 185
Query: 608 DGHIMLSDFDLS 619
+ +SDF LS
Sbjct: 186 GRKMKISDFGLS 197
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 28/39 (71%), Gaps = 1/39 (2%)
Query: 580 EVLLALEYLHMLGVVYRDLKPENILVREDGHIMLSDFDL 618
E++ + YLH G++++DLK +N+ ++G ++++DF L
Sbjct: 138 EIVKGMGYLHAKGILHKDLKSKNVFY-DNGKVVITDFGL 175
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 709 GTHEYLAPEIIK----GEGHGSSVDWWTFGIFLFELLYGRTPF-KGSGNDETLSNVV 760
G Y+APE I +G+ D W+ GI L+EL GR P+ K + + L+ VV
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV 243
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 591 LGVVYRDLKPENILVREDGHIMLSDFDLS 619
L +++RD+KP NIL+ G+I L DF +S
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 12/150 (8%)
Query: 476 KKLGCGDIGTVYLAELI--GTSCLF--ALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPF 531
K LG G GTV+ I G S +KV+++ GR+ + LDH
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--SGRQSFQAVTDHMLAIGSLDHAH 94
Query: 532 LPTLFAHFTTEKFSCLVMEYCPGGDL--HVLRQKQPSRFFSEQAARFYVAEVLLALEYLH 589
+ L LV +Y P G L HV +Q Q + ++ + YL
Sbjct: 95 IVRLLGLCPGSSLQ-LVTQYLPLGSLLDHV---RQHRGALGPQLLLNWGVQIAKGMYYLE 150
Query: 590 MLGVVYRDLKPENILVREDGHIMLSDFDLS 619
G+V+R+L N+L++ + ++DF ++
Sbjct: 151 EHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 73/205 (35%), Gaps = 58/205 (28%)
Query: 451 DLRWDAIRCVQKQHGCMGMRHFKLHKKLGCGDIG-----TVYLAELIGTSCLFALKVMDN 505
DL+W+ R + + K LG G G T Y G S A+K++
Sbjct: 37 DLKWEFPR-----------ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKML-- 83
Query: 506 DFLVGRKKMPRAQTEREIM--------QMLDHPFLPTLFAHFTTEKFSCLVMEYCPGGDL 557
K +ERE + Q+ H + L T L+ EYC GDL
Sbjct: 84 -------KEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDL 136
Query: 558 -HVLRQKQPSRFFSEQAARF----------------------YVAEVLLALEYLHMLGVV 594
+ LR K+ FSE + + +V +E+L V
Sbjct: 137 LNYLRSKREK--FSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV 194
Query: 595 YRDLKPENILVREDGHIMLSDFDLS 619
+RDL N+LV + + DF L+
Sbjct: 195 HRDLAARNVLVTHGKVVKICDFGLA 219
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 707 FVGTHEYLAPEIIKGEGHGSSVDWWTFGIFLFELLYG 743
VGT Y+APE ++GE S D ++FG+ L E++ G
Sbjct: 195 IVGTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITG 230
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Query: 477 KLGCGDIGTVYLAELIGTSCLFALKVMDNDFLVGRKKMPRAQTEREIMQMLDHPFLPTLF 536
K+G G G VY + T+ D K Q E ++M H L L
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ-EIKVMAKCQHENLVELL 96
Query: 537 AHFTTEKFSCLVMEYCPGGDL----HVLRQKQPSRFFSEQAARFYVAE-VLLALEYLHML 591
+ CLV Y P G L L P + R +A+ + +LH
Sbjct: 97 GFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWH----MRCKIAQGAANGINFLHEN 152
Query: 592 GVVYRDLKPENILVREDGHIMLSDFDLS 619
++RD+K NIL+ E +SDF L+
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 712 EYLAPEIIKGEGHGSSVDWWTFGIFLFELL-YGRTPFKGSGNDETLSNVVSQS--LRFPG 768
+++APE I + D W+FG+ L+E+ G +P+ G DE + + +R P
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD 274
Query: 769 Y 769
Y
Sbjct: 275 Y 275
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 14/94 (14%)
Query: 547 LVMEYCPGGDLHV-LRQKQ----PSR---------FFSEQAARFYVAEVLLALEYLHMLG 592
+++E+C G+L LR K+ P + F + + Y +V +E+L
Sbjct: 109 VIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK 168
Query: 593 VVYRDLKPENILVREDGHIMLSDFDLSLRCAVNP 626
++RDL NIL+ E + + DF L+ +P
Sbjct: 169 CIHRDLAARNILLSEKNVVKICDFGLARDIXKDP 202
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,007,203
Number of Sequences: 62578
Number of extensions: 834479
Number of successful extensions: 4842
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 1934
Number of HSP's gapped (non-prelim): 2129
length of query: 857
length of database: 14,973,337
effective HSP length: 107
effective length of query: 750
effective length of database: 8,277,491
effective search space: 6208118250
effective search space used: 6208118250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)