Query 035933
Match_columns 405
No_of_seqs 163 out of 1750
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 13:03:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035933.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/035933hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rp8_A Flavoprotein monooxygen 100.0 2.1E-44 7.1E-49 340.1 32.2 344 6-394 22-375 (407)
2 4hb9_A Similarities with proba 100.0 8.2E-43 2.8E-47 330.0 35.2 357 8-387 2-382 (412)
3 2vou_A 2,6-dihydroxypyridine h 100.0 2.1E-42 7.2E-47 325.1 34.1 356 5-392 3-371 (397)
4 2xdo_A TETX2 protein; tetracyc 100.0 2.2E-40 7.4E-45 311.5 36.2 357 5-391 24-387 (398)
5 3c96_A Flavin-containing monoo 100.0 1.2E-40 4E-45 314.6 28.1 345 5-383 2-366 (410)
6 3oz2_A Digeranylgeranylglycero 100.0 5.4E-40 1.9E-44 308.9 24.0 352 5-402 2-363 (397)
7 2x3n_A Probable FAD-dependent 100.0 7.1E-40 2.4E-44 308.4 23.6 339 6-391 5-361 (399)
8 2qa1_A PGAE, polyketide oxygen 100.0 1.2E-38 4E-43 306.7 29.1 339 4-391 8-351 (500)
9 2qa2_A CABE, polyketide oxygen 100.0 1.7E-38 6E-43 305.5 28.9 336 6-391 11-352 (499)
10 3alj_A 2-methyl-3-hydroxypyrid 100.0 1.5E-39 5.1E-44 303.9 20.6 333 5-389 9-350 (379)
11 1pn0_A Phenol 2-monooxygenase; 100.0 8.4E-39 2.9E-43 317.0 26.9 354 7-394 8-428 (665)
12 3ihg_A RDME; flavoenzyme, anth 100.0 5.4E-37 1.9E-41 299.0 28.4 347 6-389 4-373 (535)
13 3fmw_A Oxygenase; mithramycin, 100.0 6.1E-38 2.1E-42 305.5 21.3 340 7-393 49-398 (570)
14 2r0c_A REBC; flavin adenine di 100.0 2.1E-37 7E-42 301.9 24.7 343 7-391 26-383 (549)
15 1k0i_A P-hydroxybenzoate hydro 100.0 3.1E-38 1.1E-42 296.7 17.1 346 7-393 2-354 (394)
16 3e1t_A Halogenase; flavoprotei 100.0 2.9E-36 9.8E-41 291.9 30.9 353 1-390 1-370 (512)
17 2dkh_A 3-hydroxybenzoate hydro 100.0 3.9E-37 1.3E-41 304.7 24.1 352 6-393 31-418 (639)
18 3atr_A Conserved archaeal prot 100.0 5.4E-37 1.8E-41 293.0 21.0 350 6-402 5-368 (453)
19 3cgv_A Geranylgeranyl reductas 100.0 3E-35 1E-39 276.8 26.5 349 6-402 3-363 (397)
20 3i3l_A Alkylhalidase CMLS; fla 100.0 5.6E-35 1.9E-39 285.0 28.7 345 4-386 20-378 (591)
21 3nix_A Flavoprotein/dehydrogen 100.0 5.9E-34 2E-38 270.0 25.2 335 5-375 3-345 (421)
22 3c4a_A Probable tryptophan hyd 100.0 3.1E-35 1.1E-39 274.7 15.8 323 8-391 1-333 (381)
23 2gmh_A Electron transfer flavo 100.0 1.3E-31 4.6E-36 262.0 25.3 343 7-391 35-427 (584)
24 2pyx_A Tryptophan halogenase; 100.0 6.3E-31 2.1E-35 255.4 27.7 332 6-386 6-412 (526)
25 2aqj_A Tryptophan halogenase, 100.0 4.9E-29 1.7E-33 242.8 29.0 326 5-384 3-394 (538)
26 2weu_A Tryptophan 5-halogenase 100.0 4.2E-29 1.4E-33 242.2 27.9 325 8-387 3-405 (511)
27 2e4g_A Tryptophan halogenase; 100.0 1.5E-28 5.1E-33 239.7 28.1 330 6-388 24-429 (550)
28 3ihm_A Styrene monooxygenase A 100.0 3E-28 1E-32 230.6 20.7 327 7-386 22-375 (430)
29 2bry_A NEDD9 interacting prote 99.9 1.8E-21 6E-26 187.1 18.7 142 6-178 91-236 (497)
30 1yvv_A Amine oxidase, flavin-c 99.8 1.3E-18 4.5E-23 159.3 18.8 151 7-177 2-167 (336)
31 3dme_A Conserved exported prot 99.6 2.1E-14 7E-19 133.0 15.6 67 108-178 147-216 (369)
32 2qcu_A Aerobic glycerol-3-phos 99.6 2.7E-13 9.1E-18 130.6 21.1 215 108-355 146-372 (501)
33 1ryi_A Glycine oxidase; flavop 99.5 7.8E-14 2.7E-18 129.8 15.2 64 107-178 160-226 (382)
34 3kkj_A Amine oxidase, flavin-c 99.5 4.2E-14 1.4E-18 126.0 11.6 36 7-42 2-37 (336)
35 3v76_A Flavoprotein; structura 99.5 6.1E-15 2.1E-19 138.0 5.6 144 5-173 25-188 (417)
36 2gag_B Heterotetrameric sarcos 99.5 5.5E-13 1.9E-17 125.1 18.9 65 108-179 171-238 (405)
37 1y56_B Sarcosine oxidase; dehy 99.5 5E-13 1.7E-17 124.4 17.8 63 108-178 146-212 (382)
38 3ps9_A TRNA 5-methylaminomethy 99.5 9.2E-13 3.2E-17 131.5 20.6 59 108-173 414-474 (676)
39 3pvc_A TRNA 5-methylaminomethy 99.5 2.7E-12 9.2E-17 128.3 19.9 59 108-173 409-470 (689)
40 2gf3_A MSOX, monomeric sarcosi 99.5 8.8E-12 3E-16 116.2 21.9 58 108-173 147-206 (389)
41 2oln_A NIKD protein; flavoprot 99.4 9.1E-12 3.1E-16 116.5 20.3 37 7-43 4-40 (397)
42 3da1_A Glycerol-3-phosphate de 99.4 3.2E-12 1.1E-16 124.4 17.4 72 107-179 166-240 (561)
43 2i0z_A NAD(FAD)-utilizing dehy 99.4 2.7E-13 9.1E-18 128.7 8.0 157 7-172 26-191 (447)
44 1rp0_A ARA6, thiazole biosynth 99.4 2.4E-12 8.2E-17 114.5 13.6 142 6-178 38-197 (284)
45 3nyc_A D-arginine dehydrogenas 99.4 4.7E-12 1.6E-16 117.6 16.2 63 108-178 151-216 (381)
46 2gqf_A Hypothetical protein HI 99.4 9.4E-14 3.2E-18 129.5 4.6 146 5-173 2-169 (401)
47 3jsk_A Cypbp37 protein; octame 99.4 3.4E-12 1.2E-16 114.5 14.3 143 7-178 79-257 (344)
48 2gv8_A Monooxygenase; FMO, FAD 99.4 2.3E-12 7.8E-17 122.4 13.2 156 5-174 4-179 (447)
49 4a9w_A Monooxygenase; baeyer-v 99.4 1.8E-12 6E-17 119.3 11.7 130 6-174 2-134 (357)
50 3gwf_A Cyclohexanone monooxyge 99.4 1.6E-12 5.6E-17 125.7 11.7 139 6-175 7-150 (540)
51 3dje_A Fructosyl amine: oxygen 99.4 1.9E-12 6.5E-17 122.7 11.9 59 108-173 158-222 (438)
52 1w4x_A Phenylacetone monooxyge 99.4 3E-12 1E-16 124.5 13.3 139 6-175 15-157 (542)
53 2cul_A Glucose-inhibited divis 99.4 4E-12 1.4E-16 109.5 11.9 125 6-178 2-131 (232)
54 3ab1_A Ferredoxin--NADP reduct 99.4 6.7E-12 2.3E-16 115.7 14.1 125 4-178 11-137 (360)
55 4dgk_A Phytoene dehydrogenase; 99.4 2.5E-11 8.5E-16 117.1 18.5 37 8-44 2-38 (501)
56 2xve_A Flavin-containing monoo 99.3 7E-12 2.4E-16 119.4 13.7 153 8-175 3-169 (464)
57 3i6d_A Protoporphyrinogen oxid 99.3 7E-11 2.4E-15 112.9 20.3 62 7-68 5-84 (470)
58 3uox_A Otemo; baeyer-villiger 99.3 3.4E-12 1.2E-16 123.6 10.6 140 5-175 7-150 (545)
59 4ap3_A Steroid monooxygenase; 99.3 5.6E-12 1.9E-16 122.2 12.1 137 6-174 20-161 (549)
60 3nlc_A Uncharacterized protein 99.3 1.1E-11 3.7E-16 119.2 12.8 59 109-173 218-278 (549)
61 2zbw_A Thioredoxin reductase; 99.3 1.6E-11 5.4E-16 112.0 13.3 123 5-178 3-127 (335)
62 1qo8_A Flavocytochrome C3 fuma 99.3 1.9E-11 6.4E-16 119.4 14.2 163 6-178 120-318 (566)
63 3nrn_A Uncharacterized protein 99.3 3.3E-10 1.1E-14 106.7 21.9 37 8-44 1-37 (421)
64 3axb_A Putative oxidoreductase 99.3 2.6E-10 8.7E-15 108.4 20.9 37 5-41 21-58 (448)
65 1y0p_A Fumarate reductase flav 99.3 2.6E-11 8.8E-16 118.7 13.9 160 7-176 126-321 (571)
66 2gjc_A Thiazole biosynthetic e 99.3 4.5E-11 1.5E-15 106.7 13.6 143 7-178 65-245 (326)
67 4fk1_A Putative thioredoxin re 99.3 3.5E-11 1.2E-15 108.1 12.8 38 3-40 2-39 (304)
68 2ywl_A Thioredoxin reductase r 99.3 2.8E-11 9.7E-16 99.9 11.2 113 8-178 2-116 (180)
69 2uzz_A N-methyl-L-tryptophan o 99.3 2E-11 6.8E-16 113.1 10.4 36 7-42 2-37 (372)
70 3lzw_A Ferredoxin--NADP reduct 99.2 3.1E-11 1.1E-15 109.8 11.0 122 1-173 1-124 (332)
71 3ces_A MNMG, tRNA uridine 5-ca 99.2 6.2E-11 2.1E-15 115.0 13.1 154 6-178 27-187 (651)
72 1vdc_A NTR, NADPH dependent th 99.2 2E-11 6.9E-16 111.2 9.0 124 1-175 1-127 (333)
73 2wdq_A Succinate dehydrogenase 99.2 5.7E-11 1.9E-15 116.1 12.5 42 1-42 1-42 (588)
74 3fbs_A Oxidoreductase; structu 99.2 7.8E-11 2.7E-15 105.4 12.3 111 8-175 3-115 (297)
75 3c4n_A Uncharacterized protein 99.2 1.2E-11 4.2E-16 115.8 6.7 36 7-42 36-73 (405)
76 4at0_A 3-ketosteroid-delta4-5a 99.2 1.5E-10 5.2E-15 111.6 14.1 37 7-43 41-77 (510)
77 2zxi_A TRNA uridine 5-carboxym 99.2 9.6E-11 3.3E-15 113.2 12.4 152 7-177 27-185 (637)
78 1chu_A Protein (L-aspartate ox 99.2 3.3E-11 1.1E-15 116.6 8.9 36 7-43 8-43 (540)
79 2q7v_A Thioredoxin reductase; 99.2 8.7E-11 3E-15 106.6 11.2 121 1-174 1-125 (325)
80 3cp8_A TRNA uridine 5-carboxym 99.2 1E-10 3.5E-15 113.4 12.2 150 6-176 20-178 (641)
81 3f8d_A Thioredoxin reductase ( 99.2 1.4E-10 4.8E-15 105.0 12.3 111 7-174 15-127 (323)
82 3lov_A Protoporphyrinogen oxid 99.2 2.6E-09 8.9E-14 102.2 21.1 63 6-68 3-79 (475)
83 1kf6_A Fumarate reductase flav 99.2 1.2E-10 4.1E-15 114.1 11.8 67 111-178 134-203 (602)
84 3cty_A Thioredoxin reductase; 99.2 1.5E-10 5.2E-15 104.7 11.7 113 5-174 14-128 (319)
85 3itj_A Thioredoxin reductase 1 99.2 1.1E-10 3.8E-15 106.4 10.7 122 6-174 21-144 (338)
86 2q0l_A TRXR, thioredoxin reduc 99.2 2E-10 7E-15 103.4 12.3 113 8-175 2-117 (311)
87 1d4d_A Flavocytochrome C fumar 99.1 2.6E-10 8.7E-15 111.4 12.9 163 7-177 126-322 (572)
88 1c0p_A D-amino acid oxidase; a 99.1 1.5E-09 5E-14 100.1 17.2 38 5-42 4-41 (363)
89 3d1c_A Flavin-containing putat 99.1 1.4E-10 4.8E-15 107.2 10.3 138 6-173 3-144 (369)
90 3ka7_A Oxidoreductase; structu 99.1 5.9E-09 2E-13 98.2 21.5 36 8-43 1-36 (425)
91 1fl2_A Alkyl hydroperoxide red 99.1 3.4E-10 1.2E-14 101.9 11.7 114 7-174 1-117 (310)
92 2h88_A Succinate dehydrogenase 99.1 4.4E-10 1.5E-14 110.0 13.1 63 111-174 155-219 (621)
93 2rgh_A Alpha-glycerophosphate 99.1 7E-09 2.4E-13 101.1 21.2 37 6-42 31-67 (571)
94 1s3e_A Amine oxidase [flavin-c 99.1 7.5E-09 2.6E-13 100.1 21.3 38 6-43 3-40 (520)
95 2a87_A TRXR, TR, thioredoxin r 99.1 2.8E-10 9.5E-15 103.7 10.5 114 5-174 12-128 (335)
96 3gyx_A Adenylylsulfate reducta 99.1 3.2E-10 1.1E-14 111.7 11.2 37 7-43 22-64 (662)
97 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 4.9E-10 1.7E-14 102.4 11.6 35 8-42 2-39 (342)
98 3k7m_X 6-hydroxy-L-nicotine ox 99.1 2.2E-08 7.7E-13 94.4 23.1 35 8-42 2-36 (431)
99 3nks_A Protoporphyrinogen oxid 99.1 2.5E-09 8.6E-14 102.3 16.0 37 8-44 3-41 (477)
100 3s5w_A L-ornithine 5-monooxyge 99.1 4.1E-11 1.4E-15 114.4 3.3 152 7-174 30-194 (463)
101 1trb_A Thioredoxin reductase; 99.1 3.7E-10 1.3E-14 102.1 9.2 114 5-174 3-118 (320)
102 2e5v_A L-aspartate oxidase; ar 99.1 5E-10 1.7E-14 106.7 10.2 31 9-39 1-31 (472)
103 4a5l_A Thioredoxin reductase; 99.0 1.1E-09 3.6E-14 98.9 11.2 35 7-41 4-38 (314)
104 1hyu_A AHPF, alkyl hydroperoxi 99.0 1.7E-09 5.7E-14 104.5 12.7 114 6-173 211-327 (521)
105 2bs2_A Quinol-fumarate reducta 99.0 1.4E-09 4.6E-14 107.4 11.9 62 112-174 159-222 (660)
106 1pj5_A N,N-dimethylglycine oxi 99.0 6.7E-10 2.3E-14 113.4 8.8 59 108-174 148-209 (830)
107 4gcm_A TRXR, thioredoxin reduc 99.0 4E-09 1.4E-13 95.0 11.5 34 7-40 6-39 (312)
108 4b63_A L-ornithine N5 monooxyg 98.9 7.1E-10 2.4E-14 106.5 5.9 67 106-172 140-214 (501)
109 3l8k_A Dihydrolipoyl dehydroge 98.9 3.9E-09 1.3E-13 100.6 10.7 37 6-42 3-39 (466)
110 2a8x_A Dihydrolipoyl dehydroge 98.9 1.6E-09 5.4E-14 103.3 7.6 33 7-39 3-35 (464)
111 3r9u_A Thioredoxin reductase; 98.9 1E-08 3.5E-13 92.3 12.4 112 7-172 4-118 (315)
112 1jnr_A Adenylylsulfate reducta 98.9 3.5E-08 1.2E-12 97.5 16.7 36 7-42 22-61 (643)
113 3urh_A Dihydrolipoyl dehydroge 98.9 4.1E-09 1.4E-13 101.2 8.8 38 5-42 23-60 (491)
114 1v59_A Dihydrolipoamide dehydr 98.9 2E-09 6.8E-14 103.0 6.4 38 5-42 3-40 (478)
115 1q1r_A Putidaredoxin reductase 98.9 7.4E-09 2.5E-13 97.6 9.8 36 6-41 3-40 (431)
116 3iwa_A FAD-dependent pyridine 98.8 7.4E-09 2.5E-13 98.9 9.7 36 7-42 3-40 (472)
117 3qfa_A Thioredoxin reductase 1 98.8 1.1E-08 3.8E-13 98.7 10.9 37 5-41 30-66 (519)
118 2gqw_A Ferredoxin reductase; f 98.8 2E-08 6.7E-13 94.0 11.6 42 1-42 1-44 (408)
119 2ivd_A PPO, PPOX, protoporphyr 98.8 1.8E-08 6.1E-13 96.4 10.6 63 6-68 15-89 (478)
120 3o0h_A Glutathione reductase; 98.8 2.1E-08 7.1E-13 96.0 10.7 33 7-39 26-58 (484)
121 2hqm_A GR, grase, glutathione 98.8 7.3E-09 2.5E-13 99.0 7.5 40 1-40 5-44 (479)
122 2bc0_A NADH oxidase; flavoprot 98.8 3.4E-08 1.2E-12 94.7 12.1 37 6-42 34-73 (490)
123 1ojt_A Surface protein; redox- 98.8 2.8E-09 9.4E-14 102.1 4.1 37 6-42 5-41 (482)
124 2vvm_A Monoamine oxidase N; FA 98.8 9.2E-08 3.1E-12 91.9 14.4 60 8-67 40-111 (495)
125 1dxl_A Dihydrolipoamide dehydr 98.8 7E-09 2.4E-13 99.0 6.1 37 6-42 5-41 (470)
126 3pl8_A Pyranose 2-oxidase; sub 98.8 1.8E-07 6E-12 92.0 16.1 40 4-43 43-82 (623)
127 3lxd_A FAD-dependent pyridine 98.7 7.9E-08 2.7E-12 90.2 13.1 37 6-42 8-46 (415)
128 3h8l_A NADH oxidase; membrane 98.7 1.6E-08 5.4E-13 94.8 8.3 34 8-41 2-38 (409)
129 3g3e_A D-amino-acid oxidase; F 98.7 1.3E-09 4.4E-14 100.0 0.8 34 8-41 1-40 (351)
130 4gut_A Lysine-specific histone 98.7 4.6E-08 1.6E-12 98.1 11.8 39 6-44 335-373 (776)
131 3lad_A Dihydrolipoamide dehydr 98.7 2.1E-08 7.3E-13 95.8 9.0 37 6-42 2-38 (476)
132 3klj_A NAD(FAD)-dependent dehy 98.7 2E-08 6.7E-13 93.1 8.0 37 6-42 8-44 (385)
133 3sx6_A Sulfide-quinone reducta 98.7 1.3E-08 4.4E-13 96.2 6.8 34 8-41 5-41 (437)
134 1m6i_A Programmed cell death p 98.7 4.1E-08 1.4E-12 94.1 10.0 39 4-42 8-48 (493)
135 3ics_A Coenzyme A-disulfide re 98.7 2.3E-08 7.8E-13 98.2 8.3 116 5-172 34-152 (588)
136 3oc4_A Oxidoreductase, pyridin 98.7 8.1E-08 2.8E-12 91.1 11.6 35 8-42 3-39 (452)
137 3hyw_A Sulfide-quinone reducta 98.7 1.1E-07 3.8E-12 89.5 11.7 34 8-41 3-38 (430)
138 3kd9_A Coenzyme A disulfide re 98.7 3.1E-08 1.1E-12 93.9 8.0 37 6-42 2-40 (449)
139 1zk7_A HGII, reductase, mercur 98.7 1E-07 3.6E-12 90.8 11.6 35 5-39 2-36 (467)
140 2qae_A Lipoamide, dihydrolipoy 98.7 3.3E-08 1.1E-12 94.3 7.8 36 7-42 2-37 (468)
141 1zmd_A Dihydrolipoyl dehydroge 98.7 1.6E-08 5.3E-13 96.7 5.4 36 7-42 6-41 (474)
142 3dgz_A Thioredoxin reductase 2 98.7 7.4E-08 2.5E-12 92.3 10.0 35 6-40 5-39 (488)
143 3cgb_A Pyridine nucleotide-dis 98.7 2.3E-08 7.9E-13 95.6 6.3 35 8-42 37-73 (480)
144 3fpz_A Thiazole biosynthetic e 98.7 3E-08 1E-12 89.8 6.8 38 7-44 65-104 (326)
145 3ef6_A Toluene 1,2-dioxygenase 98.6 1.2E-07 4.1E-12 88.7 10.7 35 8-42 3-39 (410)
146 1nhp_A NADH peroxidase; oxidor 98.6 2.5E-08 8.5E-13 94.5 6.0 35 8-42 1-37 (447)
147 2bcg_G Secretory pathway GDP d 98.6 2.7E-08 9.2E-13 94.4 6.0 44 1-44 5-48 (453)
148 2cdu_A NADPH oxidase; flavoenz 98.6 2.9E-08 1E-12 94.2 5.9 35 8-42 1-37 (452)
149 1ebd_A E3BD, dihydrolipoamide 98.6 5.9E-08 2E-12 92.1 7.9 33 7-39 3-35 (455)
150 4gde_A UDP-galactopyranose mut 98.6 2E-08 6.7E-13 97.0 4.3 44 1-44 4-48 (513)
151 3h28_A Sulfide-quinone reducta 98.6 3E-07 1E-11 86.6 12.1 34 8-41 3-38 (430)
152 1v0j_A UDP-galactopyranose mut 98.6 4E-08 1.4E-12 91.6 5.7 42 1-42 1-43 (399)
153 3ntd_A FAD-dependent pyridine 98.6 4.7E-08 1.6E-12 95.6 6.3 35 8-42 2-38 (565)
154 1y56_A Hypothetical protein PH 98.6 7.1E-08 2.4E-12 92.4 6.9 112 7-173 108-220 (493)
155 1xdi_A RV3303C-LPDA; reductase 98.6 1.3E-07 4.6E-12 90.8 8.7 34 7-40 2-38 (499)
156 3fg2_P Putative rubredoxin red 98.5 4.8E-07 1.6E-11 84.4 12.0 35 8-42 2-38 (404)
157 2yqu_A 2-oxoglutarate dehydrog 98.5 1.2E-07 4.2E-12 89.9 7.7 35 8-42 2-36 (455)
158 1xhc_A NADH oxidase /nitrite r 98.5 1.5E-07 5E-12 86.7 7.6 34 8-42 9-42 (367)
159 3dgh_A TRXR-1, thioredoxin red 98.5 3.1E-07 1.1E-11 87.9 9.6 34 6-39 8-41 (483)
160 2v3a_A Rubredoxin reductase; a 98.5 5.9E-07 2E-11 83.2 10.9 99 7-174 145-245 (384)
161 4eqs_A Coenzyme A disulfide re 98.5 2.8E-07 9.5E-12 86.9 8.7 35 8-42 1-37 (437)
162 2eq6_A Pyruvate dehydrogenase 98.5 5E-07 1.7E-11 85.9 10.1 102 7-175 169-274 (464)
163 2b9w_A Putative aminooxidase; 98.4 1.9E-07 6.6E-12 87.7 6.2 38 6-43 5-43 (424)
164 1rsg_A FMS1 protein; FAD bindi 98.4 1.1E-07 3.9E-12 91.7 4.4 40 5-44 6-46 (516)
165 1v59_A Dihydrolipoamide dehydr 98.4 2E-06 6.7E-11 82.2 12.9 106 7-175 183-290 (478)
166 2yqu_A 2-oxoglutarate dehydrog 98.4 7.8E-07 2.7E-11 84.4 9.8 98 7-174 167-266 (455)
167 3vrd_B FCCB subunit, flavocyto 98.4 4E-07 1.4E-11 84.9 7.7 34 8-41 3-38 (401)
168 2yg5_A Putrescine oxidase; oxi 98.4 1.4E-07 4.8E-12 89.5 4.1 40 5-44 3-42 (453)
169 2e1m_A L-glutamate oxidase; L- 98.4 3.1E-07 1.1E-11 84.0 6.2 38 5-42 42-80 (376)
170 4b1b_A TRXR, thioredoxin reduc 98.4 6.5E-07 2.2E-11 86.2 8.2 35 7-41 42-76 (542)
171 4g6h_A Rotenone-insensitive NA 98.4 1.4E-06 4.7E-11 83.5 10.1 36 6-41 41-76 (502)
172 4dsg_A UDP-galactopyranose mut 98.4 3.5E-07 1.2E-11 87.4 5.9 38 5-42 7-45 (484)
173 2jae_A L-amino acid oxidase; o 98.3 4.8E-07 1.6E-11 86.7 6.1 39 6-44 10-48 (489)
174 2bi7_A UDP-galactopyranose mut 98.3 5.3E-07 1.8E-11 83.4 5.4 38 6-43 2-39 (384)
175 3hdq_A UDP-galactopyranose mut 98.3 6.1E-07 2.1E-11 82.8 5.7 37 6-42 28-64 (397)
176 4dna_A Probable glutathione re 98.3 4.2E-07 1.4E-11 86.5 4.5 34 6-39 4-37 (463)
177 1sez_A Protoporphyrinogen oxid 98.3 5.3E-07 1.8E-11 86.8 5.3 63 6-68 12-86 (504)
178 1ges_A Glutathione reductase; 98.3 2.3E-06 7.9E-11 81.0 9.5 101 7-175 167-268 (450)
179 3s5w_A L-ornithine 5-monooxyge 98.3 2.9E-06 1E-10 80.6 10.3 145 7-172 227-377 (463)
180 1nhp_A NADH peroxidase; oxidor 98.3 5.5E-06 1.9E-10 78.4 11.9 99 6-174 148-248 (447)
181 2r9z_A Glutathione amide reduc 98.3 6.4E-07 2.2E-11 85.1 5.2 34 6-39 3-36 (463)
182 3dk9_A Grase, GR, glutathione 98.2 5.3E-07 1.8E-11 86.1 4.3 35 6-40 19-53 (478)
183 1ebd_A E3BD, dihydrolipoamide 98.2 4.6E-06 1.6E-10 79.0 10.7 101 7-174 170-272 (455)
184 2eq6_A Pyruvate dehydrogenase 98.2 5.8E-07 2E-11 85.5 4.1 36 5-40 4-39 (464)
185 1dxl_A Dihydrolipoamide dehydr 98.2 5.8E-06 2E-10 78.7 11.0 103 7-174 177-281 (470)
186 3urh_A Dihydrolipoyl dehydroge 98.2 7.6E-06 2.6E-10 78.4 11.8 103 7-174 198-302 (491)
187 1ges_A Glutathione reductase; 98.2 6.6E-07 2.2E-11 84.7 4.2 35 6-40 3-37 (450)
188 1zmd_A Dihydrolipoyl dehydroge 98.2 1.1E-05 3.6E-10 77.0 12.2 105 7-174 178-284 (474)
189 2r9z_A Glutathione amide reduc 98.2 5.7E-06 1.9E-10 78.6 10.3 100 7-174 166-266 (463)
190 2vdc_G Glutamate synthase [NAD 98.2 1.2E-06 4E-11 82.9 5.4 37 6-42 121-157 (456)
191 3ic9_A Dihydrolipoamide dehydr 98.2 8.1E-06 2.8E-10 78.1 11.3 102 7-174 174-276 (492)
192 3ic9_A Dihydrolipoamide dehydr 98.2 5.8E-07 2E-11 86.1 3.3 34 7-40 8-41 (492)
193 1i8t_A UDP-galactopyranose mut 98.2 1E-06 3.5E-11 81.0 4.5 35 8-42 2-36 (367)
194 2iid_A L-amino-acid oxidase; f 98.2 1.4E-06 4.8E-11 83.7 5.7 39 6-44 32-70 (498)
195 1d5t_A Guanine nucleotide diss 98.2 1.7E-06 5.7E-11 81.5 6.0 39 5-43 4-42 (433)
196 1trb_A Thioredoxin reductase; 98.2 1.3E-05 4.6E-10 71.9 11.7 101 7-173 145-248 (320)
197 1mo9_A ORF3; nucleotide bindin 98.2 1.6E-06 5.3E-11 83.8 5.8 37 5-41 41-77 (523)
198 3p1w_A Rabgdi protein; GDI RAB 98.2 1.4E-06 4.9E-11 82.0 5.1 40 4-43 17-56 (475)
199 1lvl_A Dihydrolipoamide dehydr 98.2 4.6E-06 1.6E-10 79.1 8.6 98 7-174 171-270 (458)
200 3g5s_A Methylenetetrahydrofola 98.1 2.3E-06 7.8E-11 77.4 5.9 35 8-42 2-36 (443)
201 1onf_A GR, grase, glutathione 98.1 1.5E-06 5.2E-11 83.4 5.1 34 7-40 2-35 (500)
202 3ef6_A Toluene 1,2-dioxygenase 98.1 9.1E-06 3.1E-10 75.9 10.0 99 7-174 143-243 (410)
203 2hqm_A GR, grase, glutathione 98.1 1.1E-05 3.9E-10 76.9 10.3 102 7-174 185-287 (479)
204 2qae_A Lipoamide, dihydrolipoy 98.1 1.6E-05 5.4E-10 75.6 11.1 102 7-174 174-278 (468)
205 3lxd_A FAD-dependent pyridine 98.1 2.3E-05 7.7E-10 73.3 11.7 99 7-174 152-253 (415)
206 2a8x_A Dihydrolipoyl dehydroge 98.1 1.5E-05 5E-10 75.8 10.5 101 7-174 171-273 (464)
207 1ojt_A Surface protein; redox- 98.1 1.2E-05 4E-10 76.8 9.6 101 7-174 185-288 (482)
208 3k30_A Histamine dehydrogenase 98.1 3.3E-06 1.1E-10 84.3 6.0 37 6-42 390-426 (690)
209 2v3a_A Rubredoxin reductase; a 98.1 2.8E-06 9.6E-11 78.6 5.1 35 6-40 3-39 (384)
210 1lqt_A FPRA; NADP+ derivative, 98.1 2.3E-06 7.9E-11 80.9 4.3 37 6-42 2-45 (456)
211 3fg2_P Putative rubredoxin red 98.0 2E-05 6.9E-10 73.4 10.4 100 7-174 142-243 (404)
212 1lvl_A Dihydrolipoamide dehydr 98.0 2.6E-06 8.8E-11 80.8 4.3 34 6-39 4-37 (458)
213 2wpf_A Trypanothione reductase 98.0 2.4E-06 8.3E-11 81.8 3.8 32 7-38 7-39 (495)
214 1q1r_A Putidaredoxin reductase 98.0 2.8E-05 9.5E-10 73.1 10.9 100 7-173 149-251 (431)
215 2q0l_A TRXR, thioredoxin reduc 98.0 6.8E-05 2.3E-09 67.0 13.0 97 7-172 143-241 (311)
216 1fec_A Trypanothione reductase 98.0 3.7E-06 1.3E-10 80.4 4.8 33 6-38 2-35 (490)
217 1onf_A GR, grase, glutathione 98.0 3.5E-05 1.2E-09 73.8 11.5 100 7-174 176-277 (500)
218 1mo9_A ORF3; nucleotide bindin 98.0 2.6E-05 9E-10 75.2 10.5 100 8-174 215-318 (523)
219 1fec_A Trypanothione reductase 98.0 4.1E-05 1.4E-09 73.1 11.6 99 7-174 187-290 (490)
220 1o94_A Tmadh, trimethylamine d 98.0 5.5E-06 1.9E-10 83.1 5.6 36 7-42 389-424 (729)
221 3iwa_A FAD-dependent pyridine 98.0 2.9E-05 1E-09 73.9 10.5 98 7-173 159-259 (472)
222 3itj_A Thioredoxin reductase 1 98.0 3.3E-05 1.1E-09 69.8 10.4 98 7-172 173-271 (338)
223 1xdi_A RV3303C-LPDA; reductase 98.0 2.9E-05 1E-09 74.4 10.5 98 7-174 182-281 (499)
224 2gqw_A Ferredoxin reductase; f 98.0 3.4E-05 1.2E-09 71.9 10.5 95 7-174 145-241 (408)
225 1fl2_A Alkyl hydroperoxide red 98.0 7.7E-05 2.6E-09 66.6 12.5 97 7-172 144-242 (310)
226 3dgh_A TRXR-1, thioredoxin red 98.0 6.7E-05 2.3E-09 71.6 12.6 103 7-174 187-291 (483)
227 3oc4_A Oxidoreductase, pyridin 97.9 8.2E-05 2.8E-09 70.4 12.9 98 7-174 147-246 (452)
228 3cgb_A Pyridine nucleotide-dis 97.9 2.2E-05 7.6E-10 74.9 9.0 97 7-174 186-284 (480)
229 2wpf_A Trypanothione reductase 97.9 4.2E-05 1.4E-09 73.2 10.9 99 7-174 191-294 (495)
230 2bc0_A NADH oxidase; flavoprot 97.9 5.8E-05 2E-09 72.2 11.8 98 7-174 194-293 (490)
231 2x8g_A Thioredoxin glutathione 97.9 5.4E-06 1.9E-10 81.4 4.7 34 6-39 106-139 (598)
232 3dk9_A Grase, GR, glutathione 97.9 5.7E-05 1.9E-09 72.0 11.6 104 8-174 188-295 (478)
233 1b37_A Protein (polyamine oxid 97.9 7.2E-06 2.5E-10 78.1 5.3 38 6-43 3-41 (472)
234 3ntd_A FAD-dependent pyridine 97.9 5.1E-05 1.7E-09 74.0 11.5 35 8-42 152-186 (565)
235 3dgz_A Thioredoxin reductase 2 97.9 9.8E-05 3.3E-09 70.5 13.2 103 7-174 185-289 (488)
236 2q7v_A Thioredoxin reductase; 97.9 0.00014 4.7E-09 65.4 13.1 97 7-172 152-249 (325)
237 2xag_A Lysine-specific histone 97.9 9.5E-06 3.3E-10 82.0 5.8 38 6-43 277-314 (852)
238 2z3y_A Lysine-specific histone 97.9 9E-06 3.1E-10 80.7 5.6 38 6-43 106-143 (662)
239 2zbw_A Thioredoxin reductase; 97.9 5.2E-05 1.8E-09 68.5 10.3 101 7-173 152-253 (335)
240 1ps9_A 2,4-dienoyl-COA reducta 97.9 8.7E-06 3E-10 81.0 5.3 36 7-42 373-408 (671)
241 1zk7_A HGII, reductase, mercur 97.9 4.6E-05 1.6E-09 72.4 10.0 96 7-174 176-273 (467)
242 1xhc_A NADH oxidase /nitrite r 97.9 3.2E-05 1.1E-09 70.9 8.6 34 8-41 144-177 (367)
243 2cdu_A NADPH oxidase; flavoenz 97.9 6.5E-05 2.2E-09 71.0 10.9 98 7-174 149-249 (452)
244 3lad_A Dihydrolipoamide dehydr 97.9 9.9E-05 3.4E-09 70.3 11.8 101 7-174 180-282 (476)
245 1vdc_A NTR, NADPH dependent th 97.9 0.00017 5.7E-09 65.1 12.8 99 7-173 159-260 (333)
246 1kdg_A CDH, cellobiose dehydro 97.9 1.2E-05 4E-10 78.2 5.4 37 6-42 6-42 (546)
247 3cty_A Thioredoxin reductase; 97.9 0.00011 3.6E-09 66.0 11.3 98 7-173 155-253 (319)
248 1m6i_A Programmed cell death p 97.8 8E-05 2.7E-09 71.2 11.0 99 7-174 180-284 (493)
249 3l8k_A Dihydrolipoyl dehydroge 97.8 7.6E-05 2.6E-09 70.8 10.8 101 7-175 172-275 (466)
250 4b1b_A TRXR, thioredoxin reduc 97.8 0.0001 3.6E-09 70.9 11.6 97 8-175 224-322 (542)
251 3qfa_A Thioredoxin reductase 1 97.8 0.0002 7E-09 68.8 13.5 103 8-174 211-317 (519)
252 1cjc_A Protein (adrenodoxin re 97.8 1.4E-05 4.8E-10 75.7 5.2 37 6-42 5-43 (460)
253 1gte_A Dihydropyrimidine dehyd 97.8 1.6E-05 5.3E-10 82.8 5.6 36 7-42 187-223 (1025)
254 3t37_A Probable dehydrogenase; 97.8 1.2E-05 4E-10 77.8 4.4 36 6-41 16-52 (526)
255 3f8d_A Thioredoxin reductase ( 97.8 0.00019 6.5E-09 64.2 11.9 97 7-172 154-251 (323)
256 2a87_A TRXR, TR, thioredoxin r 97.8 0.00018 6.1E-09 65.1 11.6 35 7-41 155-189 (335)
257 3ics_A Coenzyme A-disulfide re 97.8 9.1E-05 3.1E-09 72.5 10.2 96 7-174 187-284 (588)
258 3ab1_A Ferredoxin--NADP reduct 97.8 4.8E-05 1.6E-09 69.6 7.7 100 7-172 163-263 (360)
259 2gag_A Heterotetrameric sarcos 97.8 1.7E-05 5.7E-10 82.0 4.9 36 7-42 128-163 (965)
260 3kd9_A Coenzyme A disulfide re 97.7 0.00018 6.3E-09 67.9 11.0 36 7-42 148-183 (449)
261 1ju2_A HydroxynitrIle lyase; f 97.7 1.7E-05 5.7E-10 76.6 3.1 36 6-42 25-60 (536)
262 3q9t_A Choline dehydrogenase a 97.7 2.2E-05 7.4E-10 76.2 3.8 36 6-41 5-41 (577)
263 3r9u_A Thioredoxin reductase; 97.7 0.00032 1.1E-08 62.5 11.3 97 7-172 147-244 (315)
264 3d1c_A Flavin-containing putat 97.7 0.00024 8.4E-09 65.0 10.8 35 7-41 166-200 (369)
265 3ayj_A Pro-enzyme of L-phenyla 97.6 2E-05 6.8E-10 77.7 3.1 36 7-42 56-100 (721)
266 4eqs_A Coenzyme A disulfide re 97.6 0.00038 1.3E-08 65.4 11.8 36 7-42 147-182 (437)
267 1hyu_A AHPF, alkyl hydroperoxi 97.6 0.00036 1.2E-08 67.1 11.8 97 7-172 355-453 (521)
268 1gpe_A Protein (glucose oxidas 97.6 4.1E-05 1.4E-09 74.7 4.9 37 6-42 23-60 (587)
269 1n4w_A CHOD, cholesterol oxida 97.6 4E-05 1.4E-09 73.5 4.5 36 6-41 4-39 (504)
270 2x8g_A Thioredoxin glutathione 97.6 0.00062 2.1E-08 66.8 13.0 32 8-39 287-318 (598)
271 1coy_A Cholesterol oxidase; ox 97.6 4.9E-05 1.7E-09 72.9 4.9 36 6-41 10-45 (507)
272 3qvp_A Glucose oxidase; oxidor 97.6 3.6E-05 1.2E-09 74.7 3.7 35 6-40 18-53 (583)
273 3lzw_A Ferredoxin--NADP reduct 97.6 0.0002 6.8E-09 64.4 8.5 96 7-172 154-250 (332)
274 4dna_A Probable glutathione re 97.5 0.00048 1.6E-08 65.3 11.3 99 7-174 170-270 (463)
275 1vg0_A RAB proteins geranylger 97.5 8.9E-05 3E-09 72.1 6.1 39 4-42 5-43 (650)
276 3fim_B ARYL-alcohol oxidase; A 97.5 3.5E-05 1.2E-09 74.6 2.6 36 7-42 2-38 (566)
277 2jbv_A Choline oxidase; alcoho 97.5 6.8E-05 2.3E-09 72.5 4.2 37 6-42 12-49 (546)
278 3gwf_A Cyclohexanone monooxyge 97.4 0.0011 3.9E-08 63.8 11.7 35 7-41 178-212 (540)
279 2g1u_A Hypothetical protein TM 97.4 0.00018 6.3E-09 57.0 5.1 41 1-41 13-53 (155)
280 1cjc_A Protein (adrenodoxin re 97.4 0.00071 2.4E-08 63.9 9.9 35 7-41 145-200 (460)
281 3uox_A Otemo; baeyer-villiger 97.3 0.0018 6.3E-08 62.4 12.3 36 7-42 185-220 (545)
282 2gv8_A Monooxygenase; FMO, FAD 97.3 0.00075 2.6E-08 63.6 9.3 35 7-41 212-247 (447)
283 4g6h_A Rotenone-insensitive NA 97.3 0.00075 2.6E-08 64.5 9.0 44 123-171 285-331 (502)
284 4a5l_A Thioredoxin reductase; 97.1 0.0063 2.2E-07 54.0 13.0 35 7-41 152-186 (314)
285 1id1_A Putative potassium chan 97.1 0.00071 2.4E-08 53.4 5.7 35 6-40 2-36 (153)
286 3k30_A Histamine dehydrogenase 97.1 0.0025 8.6E-08 63.5 10.8 98 8-172 524-624 (690)
287 2xve_A Flavin-containing monoo 97.0 0.0022 7.6E-08 60.6 9.6 35 7-41 197-231 (464)
288 3fbs_A Oxidoreductase; structu 97.0 0.00081 2.8E-08 59.3 5.9 33 7-40 141-173 (297)
289 3llv_A Exopolyphosphatase-rela 97.0 0.00085 2.9E-08 52.1 5.2 35 7-41 6-40 (141)
290 1lqt_A FPRA; NADP+ derivative, 96.9 0.0037 1.3E-07 58.9 9.8 35 7-41 147-202 (456)
291 1lss_A TRK system potassium up 96.8 0.0014 4.6E-08 50.6 5.0 33 8-40 5-37 (140)
292 3fwz_A Inner membrane protein 96.8 0.0017 5.8E-08 50.3 5.4 35 7-41 7-41 (140)
293 4b63_A L-ornithine N5 monooxyg 96.7 0.0086 3E-07 57.1 10.8 36 7-42 246-283 (501)
294 4e12_A Diketoreductase; oxidor 96.7 0.0019 6.6E-08 56.7 5.6 36 6-41 3-38 (283)
295 2vdc_G Glutamate synthase [NAD 96.7 0.0011 3.8E-08 62.5 4.2 36 7-42 264-300 (456)
296 3lk7_A UDP-N-acetylmuramoylala 96.7 0.0015 5.1E-08 61.5 5.2 35 6-40 8-42 (451)
297 2hmt_A YUAA protein; RCK, KTN, 96.6 0.0019 6.4E-08 50.1 4.7 34 7-40 6-39 (144)
298 2gag_A Heterotetrameric sarcos 96.5 0.0064 2.2E-07 62.9 9.1 34 8-41 285-318 (965)
299 3ic5_A Putative saccharopine d 96.5 0.0023 7.8E-08 47.6 4.3 33 8-40 6-39 (118)
300 3klj_A NAD(FAD)-dependent dehy 96.5 0.0025 8.6E-08 58.6 5.0 35 8-42 147-181 (385)
301 4gcm_A TRXR, thioredoxin reduc 96.4 0.0024 8.2E-08 56.9 4.6 36 7-42 145-180 (312)
302 3tl2_A Malate dehydrogenase; c 96.4 0.004 1.4E-07 55.3 5.6 36 5-40 6-42 (315)
303 1bg6_A N-(1-D-carboxylethyl)-L 96.4 0.0033 1.1E-07 57.3 5.2 35 6-40 3-37 (359)
304 1o94_A Tmadh, trimethylamine d 96.4 0.0075 2.6E-07 60.4 8.1 34 7-40 528-563 (729)
305 3c85_A Putative glutathione-re 96.3 0.0041 1.4E-07 50.5 5.1 35 7-41 39-74 (183)
306 3g0o_A 3-hydroxyisobutyrate de 96.3 0.0041 1.4E-07 55.2 5.2 41 1-41 1-41 (303)
307 4a9w_A Monooxygenase; baeyer-v 96.3 0.0099 3.4E-07 53.7 7.9 33 7-40 163-195 (357)
308 1pzg_A LDH, lactate dehydrogen 96.3 0.0047 1.6E-07 55.4 5.5 34 8-41 10-44 (331)
309 2dpo_A L-gulonate 3-dehydrogen 96.2 0.0044 1.5E-07 55.2 5.1 40 1-41 1-40 (319)
310 1gte_A Dihydropyrimidine dehyd 96.2 0.0079 2.7E-07 62.6 7.6 33 8-40 333-366 (1025)
311 3ghy_A Ketopantoate reductase 96.2 0.005 1.7E-07 55.5 5.3 32 8-39 4-35 (335)
312 1y6j_A L-lactate dehydrogenase 96.2 0.0053 1.8E-07 54.8 5.2 36 6-41 6-43 (318)
313 3qha_A Putative oxidoreductase 96.2 0.0036 1.2E-07 55.3 4.2 35 7-41 15-49 (296)
314 3i83_A 2-dehydropantoate 2-red 96.1 0.0056 1.9E-07 54.7 5.2 33 8-40 3-35 (320)
315 2ewd_A Lactate dehydrogenase,; 96.1 0.0066 2.2E-07 54.2 5.5 35 7-41 4-39 (317)
316 1f0y_A HCDH, L-3-hydroxyacyl-C 96.1 0.007 2.4E-07 53.6 5.6 34 8-41 16-49 (302)
317 3l4b_C TRKA K+ channel protien 96.1 0.0054 1.8E-07 51.5 4.5 33 9-41 2-34 (218)
318 3dfz_A SIRC, precorrin-2 dehyd 96.0 0.0081 2.8E-07 50.2 5.3 34 6-39 30-63 (223)
319 3l6d_A Putative oxidoreductase 96.0 0.0093 3.2E-07 52.9 6.0 37 5-41 7-43 (306)
320 1ps9_A 2,4-dienoyl-COA reducta 96.0 0.027 9.3E-07 55.9 9.9 29 7-35 494-522 (671)
321 1t2d_A LDH-P, L-lactate dehydr 96.0 0.0087 3E-07 53.4 5.7 35 7-41 4-39 (322)
322 3k96_A Glycerol-3-phosphate de 96.0 0.0072 2.4E-07 54.8 5.2 35 7-41 29-63 (356)
323 2x5o_A UDP-N-acetylmuramoylala 95.9 0.0053 1.8E-07 57.5 4.4 37 6-42 4-40 (439)
324 3ado_A Lambda-crystallin; L-gu 95.9 0.0065 2.2E-07 53.8 4.5 35 7-41 6-40 (319)
325 2ew2_A 2-dehydropantoate 2-red 95.9 0.0082 2.8E-07 53.4 5.1 33 8-40 4-36 (316)
326 4dio_A NAD(P) transhydrogenase 95.9 0.01 3.5E-07 54.2 5.6 36 6-41 189-224 (405)
327 3hn2_A 2-dehydropantoate 2-red 95.8 0.007 2.4E-07 53.9 4.5 33 8-40 3-35 (312)
328 2hjr_A Malate dehydrogenase; m 95.8 0.011 3.6E-07 53.0 5.6 35 7-41 14-49 (328)
329 1kyq_A Met8P, siroheme biosynt 95.8 0.0065 2.2E-07 52.5 3.8 35 6-40 12-46 (274)
330 4e21_A 6-phosphogluconate dehy 95.7 0.01 3.5E-07 53.8 5.2 38 4-41 19-56 (358)
331 3mog_A Probable 3-hydroxybutyr 95.7 0.011 3.6E-07 56.0 5.4 36 6-41 4-39 (483)
332 3gvi_A Malate dehydrogenase; N 95.7 0.013 4.5E-07 52.2 5.6 37 5-41 5-42 (324)
333 2raf_A Putative dinucleotide-b 95.7 0.013 4.5E-07 48.7 5.3 35 7-41 19-53 (209)
334 3p7m_A Malate dehydrogenase; p 95.7 0.014 4.7E-07 52.0 5.7 37 5-41 3-40 (321)
335 3g17_A Similar to 2-dehydropan 95.7 0.0086 2.9E-07 52.8 4.3 33 8-40 3-35 (294)
336 3sx6_A Sulfide-quinone reducta 95.7 0.035 1.2E-06 51.9 8.7 44 123-171 221-268 (437)
337 3p2y_A Alanine dehydrogenase/p 95.6 0.011 3.8E-07 53.5 4.8 36 6-41 183-218 (381)
338 1ks9_A KPA reductase;, 2-dehyd 95.6 0.014 4.7E-07 51.3 5.4 33 9-41 2-34 (291)
339 3c24_A Putative oxidoreductase 95.6 0.016 5.4E-07 50.9 5.7 33 8-40 12-45 (286)
340 1lld_A L-lactate dehydrogenase 95.6 0.013 4.5E-07 52.3 5.2 34 7-40 7-42 (319)
341 4huj_A Uncharacterized protein 95.5 0.0067 2.3E-07 51.0 3.0 35 7-41 23-58 (220)
342 3pid_A UDP-glucose 6-dehydroge 95.5 0.013 4.3E-07 54.3 4.9 35 6-41 35-69 (432)
343 3gg2_A Sugar dehydrogenase, UD 95.5 0.014 4.9E-07 54.6 5.2 34 8-41 3-36 (450)
344 3d0o_A L-LDH 1, L-lactate dehy 95.5 0.015 5.1E-07 51.8 5.1 35 6-40 5-41 (317)
345 3g79_A NDP-N-acetyl-D-galactos 95.5 0.013 4.4E-07 55.1 4.9 36 6-41 17-54 (478)
346 3pqe_A L-LDH, L-lactate dehydr 95.4 0.016 5.6E-07 51.6 5.2 35 6-40 4-40 (326)
347 2uyy_A N-PAC protein; long-cha 95.3 0.019 6.5E-07 51.1 5.5 35 7-41 30-64 (316)
348 4g65_A TRK system potassium up 95.3 0.0067 2.3E-07 57.1 2.5 35 7-41 3-37 (461)
349 3ktd_A Prephenate dehydrogenas 95.3 0.02 6.7E-07 51.4 5.5 41 1-41 2-42 (341)
350 4e4t_A Phosphoribosylaminoimid 95.3 0.025 8.4E-07 52.6 6.2 40 2-41 30-69 (419)
351 2izz_A Pyrroline-5-carboxylate 95.3 0.019 6.4E-07 51.4 5.1 37 5-41 20-60 (322)
352 3dtt_A NADP oxidoreductase; st 95.2 0.021 7.2E-07 48.7 5.2 36 6-41 18-53 (245)
353 3q2o_A Phosphoribosylaminoimid 95.2 0.054 1.8E-06 49.8 8.3 36 6-41 13-48 (389)
354 3eag_A UDP-N-acetylmuramate:L- 95.2 0.021 7.3E-07 51.0 5.4 34 8-41 5-39 (326)
355 3ego_A Probable 2-dehydropanto 95.2 0.019 6.5E-07 50.9 5.0 32 8-40 3-34 (307)
356 3gpi_A NAD-dependent epimerase 95.2 0.025 8.6E-07 49.4 5.6 34 8-41 4-37 (286)
357 3doj_A AT3G25530, dehydrogenas 95.1 0.024 8.2E-07 50.3 5.4 34 8-41 22-55 (310)
358 2y0c_A BCEC, UDP-glucose dehyd 95.1 0.021 7.3E-07 53.9 5.2 34 7-40 8-41 (478)
359 1evy_A Glycerol-3-phosphate de 95.1 0.011 3.6E-07 54.1 3.0 32 9-40 17-48 (366)
360 2rcy_A Pyrroline carboxylate r 95.1 0.024 8.1E-07 48.9 5.1 34 8-41 5-42 (262)
361 3ggo_A Prephenate dehydrogenas 95.1 0.028 9.7E-07 49.9 5.7 35 7-41 33-69 (314)
362 3k5i_A Phosphoribosyl-aminoimi 95.1 0.024 8.2E-07 52.4 5.4 37 3-40 20-56 (403)
363 3h28_A Sulfide-quinone reducta 95.1 0.063 2.2E-06 50.0 8.3 43 123-172 213-256 (430)
364 2v6b_A L-LDH, L-lactate dehydr 95.0 0.024 8.1E-07 50.2 5.1 32 9-40 2-35 (304)
365 3oj0_A Glutr, glutamyl-tRNA re 95.0 0.0084 2.9E-07 46.5 1.9 34 7-40 21-54 (144)
366 4ezb_A Uncharacterized conserv 95.0 0.015 5.2E-07 51.8 3.8 34 8-41 25-59 (317)
367 1l7d_A Nicotinamide nucleotide 95.0 0.028 9.5E-07 51.6 5.6 36 6-41 171-206 (384)
368 1x13_A NAD(P) transhydrogenase 95.0 0.024 8.3E-07 52.2 5.2 35 7-41 172-206 (401)
369 1ur5_A Malate dehydrogenase; o 94.9 0.03 1E-06 49.7 5.4 34 8-41 3-37 (309)
370 3vps_A TUNA, NAD-dependent epi 94.9 0.029 9.9E-07 49.8 5.4 41 1-41 1-42 (321)
371 3cky_A 2-hydroxymethyl glutara 94.9 0.023 7.7E-07 50.2 4.7 34 7-40 4-37 (301)
372 2zyd_A 6-phosphogluconate dehy 94.9 0.022 7.5E-07 53.9 4.7 37 5-41 13-49 (480)
373 3hwr_A 2-dehydropantoate 2-red 94.9 0.026 8.9E-07 50.3 5.0 33 7-40 19-51 (318)
374 3tri_A Pyrroline-5-carboxylate 94.9 0.033 1.1E-06 48.6 5.5 35 7-41 3-40 (280)
375 2aef_A Calcium-gated potassium 94.9 0.0096 3.3E-07 50.5 2.0 35 6-41 8-42 (234)
376 2a9f_A Putative malic enzyme ( 94.9 0.028 9.5E-07 50.8 5.0 36 5-40 186-222 (398)
377 4ap3_A Steroid monooxygenase; 94.8 0.022 7.6E-07 54.9 4.7 35 7-41 191-225 (549)
378 3k6j_A Protein F01G10.3, confi 94.8 0.037 1.3E-06 51.7 5.9 35 7-41 54-88 (460)
379 3l9w_A Glutathione-regulated p 94.8 0.024 8.2E-07 52.4 4.7 35 7-41 4-38 (413)
380 1zcj_A Peroxisomal bifunctiona 94.8 0.028 9.6E-07 52.9 5.2 35 7-41 37-71 (463)
381 3d1l_A Putative NADP oxidoredu 94.8 0.023 7.9E-07 49.1 4.3 34 7-40 10-44 (266)
382 1jw9_B Molybdopterin biosynthe 94.8 0.028 9.4E-07 48.1 4.7 34 7-40 31-65 (249)
383 1pjc_A Protein (L-alanine dehy 94.8 0.029 1E-06 50.9 5.0 34 7-40 167-200 (361)
384 3pef_A 6-phosphogluconate dehy 94.8 0.029 9.9E-07 49.2 4.8 34 8-41 2-35 (287)
385 1ldn_A L-lactate dehydrogenase 94.8 0.035 1.2E-06 49.4 5.4 39 1-40 1-41 (316)
386 1z82_A Glycerol-3-phosphate de 94.7 0.032 1.1E-06 50.1 5.2 34 7-40 14-47 (335)
387 3qsg_A NAD-binding phosphogluc 94.7 0.027 9.4E-07 50.0 4.7 34 7-40 24-58 (312)
388 3orq_A N5-carboxyaminoimidazol 94.7 0.045 1.5E-06 50.1 6.2 37 5-41 10-46 (377)
389 1vl6_A Malate oxidoreductase; 94.7 0.033 1.1E-06 50.3 5.0 35 5-39 190-225 (388)
390 2qyt_A 2-dehydropantoate 2-red 94.7 0.021 7.2E-07 50.8 3.8 31 8-38 9-45 (317)
391 2vns_A Metalloreductase steap3 94.6 0.039 1.3E-06 46.0 5.1 33 8-40 29-61 (215)
392 1guz_A Malate dehydrogenase; o 94.6 0.038 1.3E-06 49.0 5.2 33 9-41 2-36 (310)
393 3d3w_A L-xylulose reductase; u 94.6 0.052 1.8E-06 46.1 5.9 40 1-40 1-41 (244)
394 3dfu_A Uncharacterized protein 94.6 0.012 4.1E-07 49.4 1.7 33 6-38 5-37 (232)
395 2r6j_A Eugenol synthase 1; phe 94.6 0.039 1.3E-06 49.0 5.3 35 7-41 11-46 (318)
396 2q3e_A UDP-glucose 6-dehydroge 94.5 0.03 1E-06 52.8 4.7 34 8-41 6-41 (467)
397 1x0v_A GPD-C, GPDH-C, glycerol 94.5 0.02 6.8E-07 51.9 3.3 35 7-41 8-49 (354)
398 4dll_A 2-hydroxy-3-oxopropiona 94.5 0.037 1.3E-06 49.3 4.9 35 7-41 31-65 (320)
399 1zej_A HBD-9, 3-hydroxyacyl-CO 94.5 0.038 1.3E-06 48.4 4.8 34 7-41 12-45 (293)
400 1hdo_A Biliverdin IX beta redu 94.5 0.048 1.6E-06 44.7 5.3 34 8-41 4-38 (206)
401 4a7p_A UDP-glucose dehydrogena 94.4 0.04 1.4E-06 51.4 5.1 35 7-41 8-42 (446)
402 1mv8_A GMD, GDP-mannose 6-dehy 94.4 0.033 1.1E-06 52.0 4.5 32 9-40 2-33 (436)
403 2o3j_A UDP-glucose 6-dehydroge 94.4 0.038 1.3E-06 52.3 4.9 35 7-41 9-45 (481)
404 2eez_A Alanine dehydrogenase; 94.3 0.046 1.6E-06 49.8 5.3 35 6-40 165-199 (369)
405 4gwg_A 6-phosphogluconate dehy 94.3 0.046 1.6E-06 51.5 5.3 35 7-41 4-38 (484)
406 3pdu_A 3-hydroxyisobutyrate de 94.3 0.032 1.1E-06 48.9 4.0 33 9-41 3-35 (287)
407 1nyt_A Shikimate 5-dehydrogena 94.3 0.055 1.9E-06 46.9 5.5 35 6-40 118-152 (271)
408 2gdz_A NAD+-dependent 15-hydro 94.3 0.061 2.1E-06 46.4 5.8 40 1-40 1-41 (267)
409 4ffl_A PYLC; amino acid, biosy 94.3 0.051 1.7E-06 49.4 5.4 35 8-42 2-36 (363)
410 1txg_A Glycerol-3-phosphate de 94.2 0.039 1.3E-06 49.5 4.6 30 9-38 2-31 (335)
411 1cyd_A Carbonyl reductase; sho 94.2 0.064 2.2E-06 45.5 5.7 40 1-40 1-41 (244)
412 1oju_A MDH, malate dehydrogena 94.2 0.045 1.5E-06 48.0 4.7 33 9-41 2-36 (294)
413 3fi9_A Malate dehydrogenase; s 94.2 0.064 2.2E-06 48.1 5.7 36 5-40 6-44 (343)
414 2vhw_A Alanine dehydrogenase; 94.2 0.052 1.8E-06 49.6 5.2 35 6-40 167-201 (377)
415 2h78_A Hibadh, 3-hydroxyisobut 94.1 0.045 1.5E-06 48.3 4.7 34 8-41 4-37 (302)
416 3phh_A Shikimate dehydrogenase 94.1 0.063 2.1E-06 46.3 5.3 35 7-41 118-152 (269)
417 1a5z_A L-lactate dehydrogenase 94.1 0.047 1.6E-06 48.6 4.7 32 9-40 2-35 (319)
418 2iz1_A 6-phosphogluconate dehy 94.1 0.053 1.8E-06 51.2 5.3 34 7-40 5-38 (474)
419 1vpd_A Tartronate semialdehyde 94.0 0.045 1.5E-06 48.2 4.5 33 8-40 6-38 (299)
420 2h7i_A Enoyl-[acyl-carrier-pro 94.0 0.055 1.9E-06 46.8 4.9 40 1-40 1-43 (269)
421 1pjq_A CYSG, siroheme synthase 94.0 0.05 1.7E-06 51.1 5.0 35 6-40 11-45 (457)
422 3vku_A L-LDH, L-lactate dehydr 94.0 0.059 2E-06 47.9 5.1 35 6-40 8-44 (326)
423 3dhn_A NAD-dependent epimerase 94.0 0.046 1.6E-06 45.8 4.2 34 8-41 5-39 (227)
424 1jay_A Coenzyme F420H2:NADP+ o 93.9 0.057 2E-06 44.8 4.7 32 9-40 2-34 (212)
425 1ez4_A Lactate dehydrogenase; 93.9 0.057 2E-06 48.0 4.9 35 6-40 4-40 (318)
426 2pv7_A T-protein [includes: ch 93.9 0.064 2.2E-06 47.2 5.2 33 8-40 22-55 (298)
427 3nep_X Malate dehydrogenase; h 93.9 0.06 2.1E-06 47.6 5.0 33 9-41 2-36 (314)
428 3vtf_A UDP-glucose 6-dehydroge 93.9 0.059 2E-06 49.9 5.0 34 8-41 22-55 (444)
429 3gt0_A Pyrroline-5-carboxylate 93.9 0.075 2.6E-06 45.3 5.4 34 8-41 3-40 (247)
430 2p4q_A 6-phosphogluconate dehy 93.8 0.069 2.4E-06 50.6 5.5 35 7-41 10-44 (497)
431 3h8l_A NADH oxidase; membrane 93.8 0.17 6E-06 46.6 8.3 38 124-172 232-270 (409)
432 3ond_A Adenosylhomocysteinase; 93.8 0.077 2.6E-06 49.6 5.7 36 5-40 263-298 (488)
433 4gbj_A 6-phosphogluconate dehy 93.8 0.046 1.6E-06 48.1 4.0 35 8-42 6-40 (297)
434 2egg_A AROE, shikimate 5-dehyd 93.8 0.07 2.4E-06 46.9 5.2 35 6-40 140-175 (297)
435 2f1k_A Prephenate dehydrogenas 93.8 0.068 2.3E-06 46.5 5.1 32 9-40 2-33 (279)
436 3oig_A Enoyl-[acyl-carrier-pro 93.8 0.088 3E-06 45.4 5.7 40 1-40 1-43 (266)
437 1qsg_A Enoyl-[acyl-carrier-pro 93.7 0.064 2.2E-06 46.2 4.8 36 5-40 7-45 (265)
438 3ldh_A Lactate dehydrogenase; 93.7 0.071 2.4E-06 47.4 5.0 34 7-40 21-56 (330)
439 3ius_A Uncharacterized conserv 93.7 0.054 1.9E-06 47.2 4.3 34 8-41 6-39 (286)
440 3o0h_A Glutathione reductase; 93.7 0.07 2.4E-06 50.6 5.3 99 7-175 191-291 (484)
441 3e8x_A Putative NAD-dependent 93.6 0.075 2.6E-06 44.8 5.0 37 5-41 19-56 (236)
442 1yj8_A Glycerol-3-phosphate de 93.6 0.055 1.9E-06 49.4 4.3 34 8-41 22-62 (375)
443 2i6t_A Ubiquitin-conjugating e 93.6 0.071 2.4E-06 47.0 4.8 34 8-41 15-50 (303)
444 3d4o_A Dipicolinate synthase s 93.6 0.088 3E-06 46.2 5.4 35 6-40 154-188 (293)
445 3gvp_A Adenosylhomocysteinase 93.5 0.078 2.7E-06 48.6 5.1 35 6-40 219-253 (435)
446 1dlj_A UDP-glucose dehydrogena 93.5 0.053 1.8E-06 50.0 4.1 31 9-40 2-32 (402)
447 1yqg_A Pyrroline-5-carboxylate 93.5 0.073 2.5E-06 45.8 4.7 32 9-40 2-34 (263)
448 4aj2_A L-lactate dehydrogenase 93.5 0.092 3.1E-06 46.8 5.4 35 6-40 18-54 (331)
449 1hyh_A L-hicdh, L-2-hydroxyiso 93.5 0.07 2.4E-06 47.3 4.7 33 8-40 2-36 (309)
450 3b1f_A Putative prephenate deh 93.5 0.073 2.5E-06 46.6 4.8 34 7-40 6-41 (290)
451 2gf2_A Hibadh, 3-hydroxyisobut 93.4 0.073 2.5E-06 46.7 4.7 33 9-41 2-34 (296)
452 2rir_A Dipicolinate synthase, 93.4 0.11 3.8E-06 45.8 5.9 35 6-40 156-190 (300)
453 2g5c_A Prephenate dehydrogenas 93.4 0.084 2.9E-06 46.0 5.1 32 9-40 3-36 (281)
454 1dhr_A Dihydropteridine reduct 93.4 0.099 3.4E-06 44.3 5.3 42 1-42 1-43 (241)
455 3tpc_A Short chain alcohol deh 93.4 0.12 4.1E-06 44.3 5.9 41 1-41 1-42 (257)
456 3h8v_A Ubiquitin-like modifier 93.3 0.072 2.5E-06 46.5 4.3 36 6-41 35-71 (292)
457 2pgd_A 6-phosphogluconate dehy 93.3 0.084 2.9E-06 49.9 5.2 34 8-41 3-36 (482)
458 3c7a_A Octopine dehydrogenase; 93.3 0.045 1.5E-06 50.6 3.2 30 8-37 3-33 (404)
459 3rui_A Ubiquitin-like modifier 93.3 0.097 3.3E-06 46.6 5.2 36 6-41 33-69 (340)
460 3ew7_A LMO0794 protein; Q8Y8U8 93.3 0.1 3.4E-06 43.4 5.1 33 9-41 2-35 (221)
461 1p77_A Shikimate 5-dehydrogena 93.2 0.076 2.6E-06 46.1 4.4 35 6-40 118-152 (272)
462 2hk9_A Shikimate dehydrogenase 93.2 0.082 2.8E-06 45.9 4.7 34 7-40 129-162 (275)
463 1y1p_A ARII, aldehyde reductas 93.2 0.12 4.2E-06 46.1 5.9 37 4-40 8-45 (342)
464 2pd6_A Estradiol 17-beta-dehyd 93.2 0.13 4.5E-06 44.1 5.9 40 1-40 1-41 (264)
465 3sxp_A ADP-L-glycero-D-mannohe 93.2 0.13 4.5E-06 46.5 6.1 37 5-41 8-47 (362)
466 2cvz_A Dehydrogenase, 3-hydrox 93.1 0.074 2.5E-06 46.5 4.3 32 9-41 3-34 (289)
467 3ai3_A NADPH-sorbose reductase 93.1 0.14 4.9E-06 43.9 5.9 40 1-40 1-41 (263)
468 1np3_A Ketol-acid reductoisome 93.1 0.11 3.8E-06 46.6 5.3 35 7-41 16-50 (338)
469 2b69_A UDP-glucuronate decarbo 93.1 0.11 3.7E-06 46.6 5.4 37 5-41 25-62 (343)
470 3don_A Shikimate dehydrogenase 93.0 0.074 2.5E-06 46.1 3.9 35 7-41 117-152 (277)
471 1zud_1 Adenylyltransferase THI 93.0 0.098 3.4E-06 44.7 4.6 35 6-40 27-62 (251)
472 4e6p_A Probable sorbitol dehyd 92.9 0.14 4.7E-06 43.9 5.6 40 1-40 2-42 (259)
473 3ce6_A Adenosylhomocysteinase; 92.9 0.1 3.5E-06 49.1 5.0 36 6-41 273-308 (494)
474 2pnf_A 3-oxoacyl-[acyl-carrier 92.9 0.11 3.9E-06 44.0 4.9 40 1-40 1-41 (248)
475 3jyo_A Quinate/shikimate dehyd 92.8 0.14 4.8E-06 44.6 5.5 35 6-40 126-161 (283)
476 2zqz_A L-LDH, L-lactate dehydr 92.8 0.12 4.1E-06 46.0 5.1 35 6-40 8-44 (326)
477 3tnl_A Shikimate dehydrogenase 92.8 0.14 4.7E-06 45.3 5.4 35 6-40 153-188 (315)
478 4b4o_A Epimerase family protei 92.8 0.14 4.6E-06 45.0 5.5 33 9-41 2-35 (298)
479 3enk_A UDP-glucose 4-epimerase 92.8 0.14 4.9E-06 45.7 5.7 36 6-41 4-40 (341)
480 2wtb_A MFP2, fatty acid multif 92.8 0.11 3.8E-06 51.7 5.3 34 8-41 313-346 (725)
481 3h2s_A Putative NADH-flavin re 92.7 0.13 4.4E-06 42.9 5.0 32 9-40 2-34 (224)
482 4gx0_A TRKA domain protein; me 92.7 0.12 4.2E-06 50.0 5.4 35 8-42 349-383 (565)
483 1b8p_A Protein (malate dehydro 92.7 0.082 2.8E-06 47.3 3.9 33 7-39 5-45 (329)
484 2dzd_A Pyruvate carboxylase; b 92.6 0.072 2.5E-06 50.1 3.6 40 1-41 1-40 (461)
485 1pgj_A 6PGDH, 6-PGDH, 6-phosph 92.6 0.11 3.8E-06 49.0 4.9 32 9-40 3-34 (478)
486 2d4a_B Malate dehydrogenase; a 92.5 0.13 4.3E-06 45.5 4.9 33 9-41 1-34 (308)
487 3h9u_A Adenosylhomocysteinase; 92.5 0.14 4.7E-06 47.1 5.1 36 5-40 209-244 (436)
488 2z1m_A GDP-D-mannose dehydrata 92.5 0.15 5.1E-06 45.6 5.4 35 7-41 3-38 (345)
489 3u62_A Shikimate dehydrogenase 92.4 0.14 4.9E-06 43.7 4.9 32 9-40 110-142 (253)
490 2dbq_A Glyoxylate reductase; D 92.4 0.21 7.2E-06 44.6 6.3 36 6-41 149-184 (334)
491 3afn_B Carbonyl reductase; alp 92.4 0.12 4.1E-06 44.1 4.5 39 1-39 1-40 (258)
492 1y7t_A Malate dehydrogenase; N 92.4 0.091 3.1E-06 46.9 3.8 33 8-40 5-45 (327)
493 1lu9_A Methylene tetrahydromet 92.4 0.17 5.7E-06 44.2 5.5 35 6-40 118-153 (287)
494 3h5n_A MCCB protein; ubiquitin 92.4 0.13 4.4E-06 46.4 4.8 36 6-41 117-153 (353)
495 1gpj_A Glutamyl-tRNA reductase 92.3 0.14 4.8E-06 47.2 5.1 35 6-40 166-201 (404)
496 3pwz_A Shikimate dehydrogenase 92.3 0.17 5.7E-06 43.8 5.3 35 6-40 119-154 (272)
497 1leh_A Leucine dehydrogenase; 92.3 0.17 5.7E-06 45.7 5.5 34 6-39 172-205 (364)
498 1i36_A Conserved hypothetical 92.3 0.12 4E-06 44.5 4.4 30 9-38 2-31 (264)
499 3ruf_A WBGU; rossmann fold, UD 92.3 0.096 3.3E-06 47.1 4.0 36 6-41 24-60 (351)
500 2yjz_A Metalloreductase steap4 91.5 0.025 8.6E-07 46.6 0.0 35 7-41 19-53 (201)
No 1
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=2.1e-44 Score=340.11 Aligned_cols=344 Identities=24% Similarity=0.280 Sum_probs=256.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
+++||+||||||+|+++|+.|+++|++|+||||.+.+.. .++++.+++++.++|+++++.. .+...+.+... ..
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~---~~~~~~l~~~~~~~l~~lg~~~-~~~~~~~~~~~--~~ 95 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKP---VGAAISVWPNGVKCMAHLGMGD-IMETFGGPLRR--MA 95 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC-------CEEEECHHHHHHHHHTTCHH-HHHHHSCCCCE--EE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC---cCeeEEECHHHHHHHHHCCCHH-HHHhhcCCCcc--eE
Confidence 568999999999999999999999999999999987643 5789999999999999998844 44444444322 22
Q ss_pred eecCc--cceeeeec----ccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeE
Q 035933 86 AVDRE--KNICRVLA----RDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIID 158 (405)
Q Consensus 86 ~~~~~--~~~~~~~~----~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~ 158 (405)
..+.. ........ .......+.++|..|.+.|.+.+.. + ++++++|++++.++ ..|+|+ +.+|+.
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~-~~i~~~~~v~~i~~~~--~~v~v~---~~~g~~-- 167 (407)
T 3rp8_A 96 YRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR-DSVQFGKRVTRCEEDA--DGVTVW---FTDGSS-- 167 (407)
T ss_dssp EEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG-GGEEESCCEEEEEEET--TEEEEE---ETTSCE--
T ss_pred EEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc-CEEEECCEEEEEEecC--CcEEEE---EcCCCE--
Confidence 22222 11111111 1112455779999999999999876 6 99999999998654 467776 667875
Q ss_pred EeeeEEEeecCCccccccccc-CCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEee
Q 035933 159 VVGDLLVAADGSRSSVRQTFL-PDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELM 237 (405)
Q Consensus 159 ~~~d~vV~AdG~~S~vr~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 237 (405)
+++|+||+|||.+|.+|+.+. ....+.+.++..+++.+..+.... ....+..+..++.+++++|.+
T Consensus 168 ~~a~~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~p~~ 234 (407)
T 3rp8_A 168 ASGDLLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALA-------------PGDQWTTFVGEGKQVSLMPVS 234 (407)
T ss_dssp EEESEEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTC-------------CTTEEEEEEETTEEEEEEEET
T ss_pred EeeCEEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccC-------------CCCceEEEECCCcEEEEEEcC
Confidence 899999999999999999984 334566777778888776543211 112334455788999999999
Q ss_pred CcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccc--eeeecccCCCCcC
Q 035933 238 YKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPF--LNLIADCDPLTQI 315 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 315 (405)
++...|++....+... ........+. +.+.+..|.+.+.+++....... .+.++...+.++|
T Consensus 235 ~~~~~~~~~~~~~~~~---------------~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (407)
T 3rp8_A 235 AGRFYFFFDVPLPAGL---------------AEDRDTLRAD-LSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRL 298 (407)
T ss_dssp TTEEEEEEEEECCTTC---------------SCCTTTHHHH-HHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCC
T ss_pred CCeEEEEEEeCCCcCC---------------CCCchhHHHH-HHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCce
Confidence 9988888777644322 0111223333 34445668888888877665432 2555656666788
Q ss_pred ccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcCCCC
Q 035933 316 YWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLGLPL 394 (405)
Q Consensus 316 ~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~~~~ 394 (405)
..+|++|||||||.++|++|||+|+||+||..|+++|.+.. ....+|+.|+++|++++..++..|+.++++++..++
T Consensus 299 ~~~rv~LvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~--~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~ 375 (407)
T 3rp8_A 299 VRGRVALLGDAGHSTTPDIGQGGCAAMEDAVVLGAVFRQTR--DIAAALREYEAQRCDRVRDLVLKARKRCDITHGKDM 375 (407)
T ss_dssp EETTEEECGGGTCCCCGGGSCHHHHHHHHHHHHHHHHHSCC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTH
T ss_pred ecCCEEEEEcccccCCcchhhhHHHHHHHHHHHHHHHhcCC--CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCH
Confidence 88999999999999999999999999999999999998653 789999999999999999999999999999987554
No 2
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=8.2e-43 Score=329.96 Aligned_cols=357 Identities=18% Similarity=0.180 Sum_probs=234.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhh--hcccCCccccccc
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLL--HNITLPLTIDQNR 85 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~ 85 (405)
++|+|||||||||++|+.|+++|++|+||||.+.+... ..|.++.++++++++|+++++..... ......... ...
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~-~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~-~~~ 79 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSI-LPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGG-QSR 79 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSS-CCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECC-CCE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcC-CCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCc-cee
Confidence 58999999999999999999999999999999887542 34778999999999999998743211 111111000 111
Q ss_pred eecCcccee-------eeecccCCcccccccHHHHHHHHHhcCCCceEEecceEEEEEEecCCCeEEEEEeecCCCceeE
Q 035933 86 AVDREKNIC-------RVLARDENFNYLQAHWTDLHGLIYNTLPVEIVFWGHLYLTFCISHDKSTVNVKAKNLRTDVIID 158 (405)
Q Consensus 86 ~~~~~~~~~-------~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~ 158 (405)
..+...... .........+.+.++|..|.+.|.+.+... +++++++++++..+ +..++|+ ++||++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~~~~-v~~~~~v~~~~~~~-~~~v~v~---~~dG~~-- 152 (412)
T 4hb9_A 80 FYNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGLANT-IQWNKTFVRYEHIE-NGGIKIF---FADGSH-- 152 (412)
T ss_dssp EECTTSCEEEC--------------CEEEEEHHHHHHHHHTTCTTT-EECSCCEEEEEECT-TSCEEEE---ETTSCE--
T ss_pred EecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhccce-EEEEEEEEeeeEcC-CCeEEEE---ECCCCE--
Confidence 111111010 011111233456789999999999988643 88999999998643 3467777 678886
Q ss_pred EeeeEEEeecCCcccccccccCCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEe-e
Q 035933 159 VVGDLLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYEL-M 237 (405)
Q Consensus 159 ~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~ 237 (405)
+++|+||+|||.+|.||+.+.+.....+.+...+.+......... ......+........+...++...+.+.. +
T Consensus 153 ~~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (412)
T 4hb9_A 153 ENVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALT----ALLPQNFRDGTPNSIVPKSPDWLFISMWRAP 228 (412)
T ss_dssp EEESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHH----HHSCGGGTSSCCEEECCSSSEEEEEEEEEEE
T ss_pred EEeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhh----cchhhhhccCCcceEeecCCCcceeeeeecC
Confidence 899999999999999999998777777777777777766542210 00111111111111111111111111111 1
Q ss_pred ----------CcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCc--cceee
Q 035933 238 ----------YKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKE--PFLNL 305 (405)
Q Consensus 238 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 305 (405)
.....+.|........ ..........+...+.....+..|.|.+.+++..... ...+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~ 298 (412)
T 4hb9_A 229 VNIHVEASLAEIDNFIVWVYVAATDS----------LPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLH 298 (412)
T ss_dssp SCTTSCGGGCCEEEEEEEEEEEEGGG----------SCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEE
T ss_pred CceeEEEeccCCCceEEEEEeccccc----------ccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccch
Confidence 1111122222111111 0011112334455555566667889999998877643 23445
Q ss_pred ecccCCCCcCccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhh--CCCcHHHHHHHHHhhcccchHHHHHHHH
Q 035933 306 IADCDPLTQIYWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERW--GPENLHSALEEHKSVRLPVTNKQVLHSR 383 (405)
Q Consensus 306 ~~~~~~~~~~~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~--~~~~~~~~l~~y~~~r~~~~~~~~~~s~ 383 (405)
.....+.++|..+||+|||||||.++|+.|||+|+||+||..|+++|... ..+++.++|+.|+++|++++.+++..|+
T Consensus 299 ~~~~~~~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~~R~~~~~~~~~~s~ 378 (412)
T 4hb9_A 299 LRSMPHLLPWKSSTVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQQMRAYANEIVGISL 378 (412)
T ss_dssp EEECCCCCCCCCCSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566777888899999999999999999999999999999999999876 2456799999999999999999999998
Q ss_pred Hhhh
Q 035933 384 RVGL 387 (405)
Q Consensus 384 ~~~~ 387 (405)
.+++
T Consensus 379 ~~~~ 382 (412)
T 4hb9_A 379 RSAQ 382 (412)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8775
No 3
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=2.1e-42 Score=325.12 Aligned_cols=356 Identities=21% Similarity=0.335 Sum_probs=249.0
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
|+.+||+||||||+|+++|+.|+++|++|+||||.+.+.. ..+.++.+++++.+.|+++++.. .....+... .
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~--~~~~g~~l~~~~~~~l~~~g~~~---~~~~~~~~~--~ 75 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLS--GFGTGIVVQPELVHYLLEQGVEL---DSISVPSSS--M 75 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCC--CCSCEEECCHHHHHHHHHTTCCG---GGTCBCCCE--E
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC--ccccccccChhHHHHHHHcCCcc---ccccccccc--e
Confidence 4578999999999999999999999999999999877422 35778999999999999998754 222222211 1
Q ss_pred ceecC-ccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeee
Q 035933 85 RAVDR-EKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 85 ~~~~~-~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d 162 (405)
...+. ........ ..+...+.|..+.+.|.+.+. ++ ++++++|++++.+ +..++|+ +.+|++ +++|
T Consensus 76 ~~~~~~~g~~~~~~----~~~~~~~~~~~l~~~L~~~~~-~~~i~~~~~v~~i~~~--~~~v~v~---~~~g~~--~~ad 143 (397)
T 2vou_A 76 EYVDALTGERVGSV----PADWRFTSYDSIYGGLYELFG-PERYHTSKCLVGLSQD--SETVQMR---FSDGTK--AEAN 143 (397)
T ss_dssp EEEETTTCCEEEEE----ECCCCEEEHHHHHHHHHHHHC-STTEETTCCEEEEEEC--SSCEEEE---ETTSCE--EEES
T ss_pred EEEecCCCCccccc----cCcccccCHHHHHHHHHHhCC-CcEEEcCCEEEEEEec--CCEEEEE---ECCCCE--EECC
Confidence 11211 11011111 112234778899999988874 66 9999999999854 3457776 567765 8999
Q ss_pred EEEeecCCcccccccccCCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCc---
Q 035933 163 LLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYK--- 239 (405)
Q Consensus 163 ~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--- 239 (405)
+||+|||.+|.+|+.+. ...+.+.++..|++.++..... ...... + .....++..++.++.++|++.+
T Consensus 144 ~vV~AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~g~ 214 (397)
T 2vou_A 144 WVIGADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVA--DDVWNY---F---NDKFTYGLLDDGHLIAYPIPGRENA 214 (397)
T ss_dssp EEEECCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSC--HHHHHH---H---TTEEEEEEETTEEEEEEEECCSSTT
T ss_pred EEEECCCcchhHHHHhc-cCCCCccceEEEEEEeeccccC--hhhhhh---h---cCceeEEecCCCEEEEEECCCCCCc
Confidence 99999999999999987 5566677777888887743221 111000 0 1123445567788888998764
Q ss_pred ---ceeEEEEEecccccccccccccccCCccc-----cccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecccCC
Q 035933 240 ---RLNWIWYITQPELACFILPFICIRGGSAT-----MKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIADCDP 311 (405)
Q Consensus 240 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (405)
..+|.|+.+.+.......-..+.+...+. ...+++.++++.+.+...|.+ +.+++......+.+.+... +
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~ 292 (397)
T 2vou_A 215 ESPRLNFQWYWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKP-FRDLVLNASSPFVTVVADA-T 292 (397)
T ss_dssp SCCEEEEEEEEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHH-HHHHHHHCSSCEEEEEEEB-C
T ss_pred cceeEEEEEEecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChH-HHHHHhccCCcceeeeeee-c
Confidence 45788887755421000000000000000 011345556655555455677 7777766655455555544 5
Q ss_pred CCcCccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcC
Q 035933 312 LTQIYWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLG 391 (405)
Q Consensus 312 ~~~~~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~ 391 (405)
.++|..+||+|||||||.++|+.|||+|+||+||..|+++|... .+..++|+.|+++|++++..++..|+.++++++.
T Consensus 293 ~~~~~~grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~--~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~ 370 (397)
T 2vou_A 293 VDRMVHGRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN--HDLRGSLQSWETRQLQQGHAYLNKVKKMASRLQH 370 (397)
T ss_dssp CSCSEETTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceecCcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 67888899999999999999999999999999999999999863 4678999999999999999999999999999886
Q ss_pred C
Q 035933 392 L 392 (405)
Q Consensus 392 ~ 392 (405)
.
T Consensus 371 ~ 371 (397)
T 2vou_A 371 G 371 (397)
T ss_dssp T
T ss_pred c
Confidence 4
No 4
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=2.2e-40 Score=311.53 Aligned_cols=357 Identities=17% Similarity=0.165 Sum_probs=240.3
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCc-cHHHHHHHhccChhhhhcccCCccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHL-LSQKIVKSWLHQPDLLHNITLPLTIDQ 83 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (405)
|+.+||+||||||+|+++|+.|++.|++|+||||.+.+... ..|.++.+++ .+.+.|+++++.. .+.....+...
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~-~~g~~~~~~~~~~~~~l~~~gl~~-~~~~~~~~~~~-- 99 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREAR-IFGGTLDLHKGSGQEAMKKAGLLQ-TYYDLALPMGV-- 99 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCC-CCSCCEECCTTTHHHHHHHTTCHH-HHHHHCBCCCE--
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCcccc-ccCCeeeeCCccHHHHHHhcChHH-HHHHhhcccce--
Confidence 45689999999999999999999999999999999876432 3566777765 5688999998744 34333332221
Q ss_pred cceecCccceeeee--cccCCcccccccHHHHHHHHHhcCCCceEEecceEEEEEEecCCCeEEEEEeecCCCceeEEee
Q 035933 84 NRAVDREKNICRVL--ARDENFNYLQAHWTDLHGLIYNTLPVEIVFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVG 161 (405)
Q Consensus 84 ~~~~~~~~~~~~~~--~~~~~~~~~~~~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~ 161 (405)
...+......... ..........++|..|.+.|.+.+....++++++|++++.++ ..|+|+ +.+|++ +++
T Consensus 100 -~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~--~~v~v~---~~~g~~--~~a 171 (398)
T 2xdo_A 100 -NIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLENDTVIWDRKLVMLEPGK--KKWTLT---FENKPS--ETA 171 (398)
T ss_dssp -EEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCTTSEEESCCEEEEEECS--SSEEEE---ETTSCC--EEE
T ss_pred -EEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCCCEEEECCEEEEEEECC--CEEEEE---ECCCcE--Eec
Confidence 2222211111111 111123345689999999999988753399999999998543 457776 567765 899
Q ss_pred eEEEeecCCcccccccccCCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCcce
Q 035933 162 DLLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYKRL 241 (405)
Q Consensus 162 d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 241 (405)
|+||+|||.+|.+|+.+.. ..+.+.+...+++.+....... +....+ . .....+.+.++..++.+|.+++..
T Consensus 172 d~vV~AdG~~S~vR~~l~~-~~~~~~g~~~~~~~~~~~~~~~-~~~~~~---~---~~g~~~~~~~~~~~~~~p~~~~~~ 243 (398)
T 2xdo_A 172 DLVILANGGMSKVRKFVTD-TEVEETGTFNIQADIHQPEINC-PGFFQL---C---NGNRLMASHQGNLLFANPNNNGAL 243 (398)
T ss_dssp SEEEECSCTTCSCCTTTCC-CCCEEEEEEEEEEEESSHHHHS-HHHHHH---H---TTSEEEEEETTEEEEEEEEETTEE
T ss_pred CEEEECCCcchhHHhhccC-CCceEcceEEEEEEeCchhccC-chhHhh---c---CCceEEEecCCCeEEEEeCCCCcE
Confidence 9999999999999998753 3445666666666654211000 111111 1 122334456777788889888877
Q ss_pred eEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecccCCCCcCcc-c--
Q 035933 242 NWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIADCDPLTQIYW-D-- 318 (405)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 318 (405)
.|++....+... ....... ..+++...+.+.+.+..|.+.+.+++........+.++...+...|.. +
T Consensus 244 ~~~~~~~~~~~~--------~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (398)
T 2xdo_A 244 HFGISFKTPDEW--------KNQTQVD-FQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGLATRIFPLEKPWKSKRPL 314 (398)
T ss_dssp EEEEEEECCTTC-----------CCSC-TTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEEEEEECCCCSCCCSCCSS
T ss_pred EEEEEEecCccc--------ccccccC-cCCHHHHHHHHHHHHcCCChHHHHHHhCcccceeeeeEeccCCCCcccCCCc
Confidence 777766543221 0000001 122333333334444667888888876643333444554444446655 5
Q ss_pred cEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhCCCc-HHHHHHHHHhhcccchHHHHHHHHHhhhhhcC
Q 035933 319 NVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWGPEN-LHSALEEHKSVRLPVTNKQVLHSRRVGLIKLG 391 (405)
Q Consensus 319 ~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~~~~-~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~ 391 (405)
||+|||||||.++|++|||+|+||+||..|+++|.... .+ ..++|+.|+++|++++..++..|+.+...+..
T Consensus 315 rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~~-~~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 387 (398)
T 2xdo_A 315 PITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLADGK-FNSIEEAVKNYEQQMFIYGKEAQEESTQNEIEMFK 387 (398)
T ss_dssp CEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHSCC-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHhcc-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999999999999999999999999999999998753 34 78999999999999999999999888765443
No 5
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=1.2e-40 Score=314.57 Aligned_cols=345 Identities=22% Similarity=0.249 Sum_probs=231.6
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCc-EEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWD-VVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQ 83 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~-v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (405)
|+++||+||||||+|+++|+.|++.|++ |+||||.+.+. ..++++.+++++++.|+++|+.. .+...+.+...
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~---~~g~g~~l~~~~~~~l~~lg~~~-~l~~~~~~~~~-- 75 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIR---PLGVGINIQPAAVEALAELGLGP-ALAATAIPTHE-- 75 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCC---CCSCEEEECHHHHHHHHHTTCHH-HHHHHSEEECE--
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcc---cceeEEEEChHHHHHHHHCCChH-HHHhhCCCcce--
Confidence 4578999999999999999999999999 99999998764 36778999999999999998743 44433332211
Q ss_pred cceecCccc-eeeee---cccCCcccccccHHHHHHHHHhcCCC--c-e-EEecceEEEEEEecCCCeEEEEEeecCCCc
Q 035933 84 NRAVDREKN-ICRVL---ARDENFNYLQAHWTDLHGLIYNTLPV--E-I-VFWGHLYLTFCISHDKSTVNVKAKNLRTDV 155 (405)
Q Consensus 84 ~~~~~~~~~-~~~~~---~~~~~~~~~~~~r~~l~~~L~~~~~~--~-~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~ 155 (405)
..+.+.... ..... ......+...++|..|.+.|.+.+.+ + + ++++++|++++. + ..|++++.+..+|+
T Consensus 76 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~--~~v~v~~~~~~~g~ 152 (410)
T 3c96_A 76 LRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-R--DGRVLIGARDGHGK 152 (410)
T ss_dssp EEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-E--TTEEEEEEEETTSC
T ss_pred EEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-C--CccEEEEecCCCCC
Confidence 111111111 11111 11223445679999999999998742 3 5 999999999986 3 34667644333475
Q ss_pred eeEEeeeEEEeecCCcccccccccCCCC-CCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeec--CCeEEE
Q 035933 156 IIDVVGDLLVAADGSRSSVRQTFLPDSK-LRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLV--PGTHTV 232 (405)
Q Consensus 156 ~~~~~~d~vV~AdG~~S~vr~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 232 (405)
..++++|+||+|||.+|.+|+.+.+... +.+.+...|+++...+... .....+.++ ++..++
T Consensus 153 ~~~~~ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 217 (410)
T 3c96_A 153 PQALGADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFL---------------DGKTMIVANDEHWSRLV 217 (410)
T ss_dssp EEEEEESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCT---------------TSSEEEEEECTTCCEEE
T ss_pred ceEEecCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeeccccccc---------------CCCeEEEecCCCCcEEE
Confidence 4468999999999999999999865432 4455666677765543210 011222333 356788
Q ss_pred EEEeeC-----cceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcCh---HHHHHHHhcCcccee
Q 035933 233 LYELMY-----KRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAP---EHATVIKETKEPFLN 304 (405)
Q Consensus 233 ~~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 304 (405)
++|+.. +...+.|....+...... ......+.... ..+++.+.+ ..|.. .+.+++........+
T Consensus 218 ~~p~~~~~~~~g~~~~~w~~~~~~~~~~~----~~~~~~~~~~~---~~~~l~~~~-~~~~~~~~~~~~~i~~~~~~~~~ 289 (410)
T 3c96_A 218 AYPISARHAAEGKSLVNWVCMVPSAAVGQ----LDNEADWNRDG---RLEDVLPFF-ADWDLGWFDIRDLLTRNQLILQY 289 (410)
T ss_dssp EEECCHHHHTTTCEEEEEEEEEEHHHHCC----CCSSCCTTCBC---CHHHHHHHH-TTCCBTTBCHHHHHHTCSEEEEE
T ss_pred EEecCCcccCCCCcEEEEEEEecCccccc----CCCccccCCCC---CHHHHHHHh-cCCCCchhHHHHHHhcCccccee
Confidence 899863 444444544332111000 00000111111 123333333 33432 355666666555555
Q ss_pred eecccCCCCcCccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccchHHHHHHHH
Q 035933 305 LIADCDPLTQIYWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVTNKQVLHSR 383 (405)
Q Consensus 305 ~~~~~~~~~~~~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~ 383 (405)
.+....+.+.|..+||+|||||||.++|++|||+|+||+||..|+++|... .+..++|+.|+++|++++..++..|+
T Consensus 290 ~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~--~~~~~~L~~Ye~~r~~~~~~~~~~s~ 366 (410)
T 3c96_A 290 PMVDRDPLPHWGRGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN--ADVAAALREYEEARRPTANKIILANR 366 (410)
T ss_dssp EEEECCCCSCCCBTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC--SSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccCCCccccccCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 666566778888999999999999999999999999999999999999874 36789999999999999999999888
No 6
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=5.4e-40 Score=308.94 Aligned_cols=352 Identities=14% Similarity=0.041 Sum_probs=220.3
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
|++|||+||||||||+++|+.|+++|++|+||||++.+.....+|.+ +++ ..++.+++... ......+......
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~--l~~---~~l~~l~~~~~-~~~~~~~~~~~~~ 75 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEG--LSK---GILNEADIKAD-RSFIANEVKGARI 75 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCE--EET---HHHHHTTCCCC-TTTEEEEESEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecc--cCH---HHHHHcCCCch-hhhhhcccceEEE
Confidence 45699999999999999999999999999999999876543334443 444 35666665321 1111111111011
Q ss_pred ceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeee
Q 035933 85 RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d 162 (405)
...+.................+.++|..+++.|.+.+. .|+ +++++++.++..+++. .+.+.. ..+++..++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~-~~~v~~--~~~~~~~~~~a~ 152 (397)
T 3oz2_A 76 YGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGK-VAGAKI--RHNNEIVDVRAK 152 (397)
T ss_dssp ECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTE-EEEEEE--EETTEEEEEEEE
T ss_pred EeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccce-eeeeee--cccccceEEEEe
Confidence 11111111111222223334567999999999999874 578 9999999998754332 222222 235666679999
Q ss_pred EEEeecCCcccccccccCCCC-CCcCceEEEEEEe-cCCCCCCchhhhhhhhccCCCCCceeE---eecCCeEEEEEEee
Q 035933 163 LLVAADGSRSSVRQTFLPDSK-LRYTGYCAWRGVF-DFSENENSETIQGIRKAYPELGNGVHT---DLVPGTHTVLYELM 237 (405)
Q Consensus 163 ~vV~AdG~~S~vr~~l~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~p~~ 237 (405)
+||+|||.+|.+|+.+..... ..+.......... ...... .....+ ...++++.+++|..
T Consensus 153 ~vIgAdG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~g~~~~~~~~ 217 (397)
T 3oz2_A 153 MVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD---------------PDYTDFYLGSIAPAGYIWVFPKG 217 (397)
T ss_dssp EEEECCCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCC---------------TTEEEEECSTTSTTEEEEEEEEE
T ss_pred EEEeCCccccHHHHHcCCCcccccceeeeeeEEEEeeccccC---------------cccceeeeeccCCCceEEEeecc
Confidence 999999999999998854332 2222222222111 111110 011111 12467788899998
Q ss_pred CcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcC-ccceeeecccCCCCcCc
Q 035933 238 YKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETK-EPFLNLIADCDPLTQIY 316 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 316 (405)
++..++.+....+... .....+++++++... .+.+.. ... ......+....+...+.
T Consensus 218 ~~~~~vg~~~~~~~~~------------------~~~~~~~~l~~~~~~-~~~l~~---~~~~~~~~~~~~~~~~~~~~~ 275 (397)
T 3oz2_A 218 EGMANVGIGSSINWIH------------------NRFELKNYLDRFIEN-HPGLKK---GQDIQLVTGGVSVSKVKMPIT 275 (397)
T ss_dssp TTEEEEEEEEETTTSC------------------SHHHHHHHHHHHHHT-CHHHHT---SEEEEEEEEEEECCCCCSCCE
T ss_pred cceeEEEEeeccchhh------------------hhhhHHHHHHHHHHh-Cccccc---cceeeeeeccccccCccccee
Confidence 8887777665544322 122333444443332 233221 111 11112222233334556
Q ss_pred cccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC--CCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcCCCC
Q 035933 317 WDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG--PENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLGLPL 394 (405)
Q Consensus 317 ~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~--~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~~~~ 394 (405)
.+|++|+|||||.++|++|||+|+||+||..||+.|.++. ++..+++|+.|++.++++..+....+..+...+..+++
T Consensus 276 ~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (397)
T 3oz2_A 276 MPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAMLSD 355 (397)
T ss_dssp ETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCH
T ss_pred eeeEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH
Confidence 6999999999999999999999999999999999998763 45568999999999999888888888877777777766
Q ss_pred CCccccee
Q 035933 395 PDRGLLIQ 402 (405)
Q Consensus 395 ~~~~~~~~ 402 (405)
..++++++
T Consensus 356 ~~~~~~~~ 363 (397)
T 3oz2_A 356 DTLDKLVD 363 (397)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66665543
No 7
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=7.1e-40 Score=308.39 Aligned_cols=339 Identities=17% Similarity=0.186 Sum_probs=229.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
+++||+||||||+|+++|+.|+++|++|+||||.+.+. ..++++.+++.+.+.|+++++.. .+.....+.. ...
T Consensus 5 ~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~---~~~~~~~l~~~~~~~l~~~g~~~-~~~~~~~~~~--~~~ 78 (399)
T 2x3n_A 5 NHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRER---AINGADLLKPAGIRVVEAAGLLA-EVTRRGGRVR--HEL 78 (399)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC------CCCCEECHHHHHHHHHTTCHH-HHHHTTCEEE--CEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCC---ccCceeeECchHHHHHHHcCcHH-HHHHhCCCcc--eeE
Confidence 35899999999999999999999999999999997753 35678899999999999998743 3333333221 111
Q ss_pred eecCccc-eeeeeccc--CCcccccccHHHHHHHHHhcCCC--ce-EEecceEEEEEEecCCCeE--EEEEeecCCCcee
Q 035933 86 AVDREKN-ICRVLARD--ENFNYLQAHWTDLHGLIYNTLPV--EI-VFWGHLYLTFCISHDKSTV--NVKAKNLRTDVII 157 (405)
Q Consensus 86 ~~~~~~~-~~~~~~~~--~~~~~~~~~r~~l~~~L~~~~~~--~~-i~~~~~v~~i~~~~~~~~v--~v~~~~~~~g~~~ 157 (405)
.++.... ........ .....+.++|..|.+.|.+.+.+ |+ ++++++|++++.++ ..| +|+ +++|+.
T Consensus 79 ~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~---~~~g~~- 152 (399)
T 2x3n_A 79 EVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVR---LNDGRV- 152 (399)
T ss_dssp EEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEE---ETTSCE-
T ss_pred EEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEE---ECCCCE-
Confidence 1211110 11111110 11123568999999999998864 78 99999999998543 345 666 567764
Q ss_pred EEeeeEEEeecCCcccccccccCCCCCC--cCce--EEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecC-CeEEE
Q 035933 158 DVVGDLLVAADGSRSSVRQTFLPDSKLR--YTGY--CAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVP-GTHTV 232 (405)
Q Consensus 158 ~~~~d~vV~AdG~~S~vr~~l~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 232 (405)
+++|+||+|||.+|.+|+.+....... +.+. ..+.+.++.+ .+. . . +++.+ +++++
T Consensus 153 -~~ad~vV~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~--------------~~~--~-~-~~~~~~~~~~~ 213 (399)
T 2x3n_A 153 -LRPRVVVGADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCV--------------AER--N-R-LYVDSQGGLAY 213 (399)
T ss_dssp -EEEEEEEECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHH--------------HHC--E-E-EEECTTSCEEE
T ss_pred -EECCEEEECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCC--------------CCC--c-c-EEEcCCCcEEE
Confidence 899999999999999999886544444 4454 5555543321 011 1 2 44566 77888
Q ss_pred EEEeeCcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHH-HHHHhcC--ccceeeeccc
Q 035933 233 LYELMYKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHA-TVIKETK--EPFLNLIADC 309 (405)
Q Consensus 233 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~ 309 (405)
++|.+++...|....+..... .+....+. +++.+.+ ..|.+.+. ..+.... ....+.+...
T Consensus 214 ~~p~~~~~~~~~~~~~~~~~~------------~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (399)
T 2x3n_A 214 FYPIGFDRARLVVSFPREEAR------------ELMADTRG---ESLRRRL-QRFVGDESAEAIAAVTGTSRFKGIPIGY 277 (399)
T ss_dssp EEEETTTEEEEEEECCHHHHH------------HHHHSTTS---HHHHHHH-HTTCCGGGHHHHHTCCCSTTCEECCCCC
T ss_pred EEEcCCCEEEEEEEeCccccc------------cccccCCH---HHHHHHH-hhcCCcchhhHHhcCCccceEEechhhc
Confidence 999987544443332322111 00000112 2223333 35666662 2233333 2234444432
Q ss_pred CCCCcCccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC--CCcHHHHHHHHHhhcccchHHHHHHHHHhhh
Q 035933 310 DPLTQIYWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG--PENLHSALEEHKSVRLPVTNKQVLHSRRVGL 387 (405)
Q Consensus 310 ~~~~~~~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~--~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 387 (405)
.+.++|..+|++|||||||.++|++|||+|+||+||..|+++|.+.. +.+..++|+.|+++|++++...+..|+.+.+
T Consensus 278 ~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~ 357 (399)
T 2x3n_A 278 LNLDRYWADNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFPVNQAIVSYGHALAT 357 (399)
T ss_dssp EECSCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccCcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhccHHHHHHHHHHHhhh
Confidence 45667788999999999999999999999999999999999998763 2467899999999999999999999999998
Q ss_pred hhcC
Q 035933 388 IKLG 391 (405)
Q Consensus 388 ~~~~ 391 (405)
++..
T Consensus 358 ~~~~ 361 (399)
T 2x3n_A 358 SLED 361 (399)
T ss_dssp HTTC
T ss_pred hhcc
Confidence 8765
No 8
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=1.2e-38 Score=306.75 Aligned_cols=339 Identities=18% Similarity=0.146 Sum_probs=221.8
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccc
Q 035933 4 RMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQ 83 (405)
Q Consensus 4 ~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (405)
+.+++||+||||||+|+++|+.|+++|++|+||||.+.+.. .++++.++++++++|+++|+.. .+... .+...
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~---~~r~~~l~~~~~~~l~~lGl~~-~~~~~-~~~~~-- 80 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTG---ESRGLGFTARTMEVFDQRGILP-RFGEV-ETSTQ-- 80 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CC---CCCSEEECHHHHHHHHTTTCGG-GGCSC-CBCCE--
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC---CCCcceECHHHHHHHHHCCCHH-HHHhc-ccccc--
Confidence 44678999999999999999999999999999999987643 4678999999999999998854 33322 11110
Q ss_pred cceecCccceeeeecccCCcc-cccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEe
Q 035933 84 NRAVDREKNICRVLARDENFN-YLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVV 160 (405)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~-~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~ 160 (405)
.. ..+ ..+. ........+ .+.++|..+++.|.+.+. .|+ ++++++|++++.++ ..|++++.+. +| ..+++
T Consensus 81 ~~-~~~-~~~~-~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~~-~g-~~~~~ 153 (500)
T 2qa1_A 81 GH-FGG-LPID-FGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVTVEVRGP-EG-KHTLR 153 (500)
T ss_dssp EE-ETT-EEEE-GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEEEEEEET-TE-EEEEE
T ss_pred cc-ccc-eecc-cccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEEEEEEcC-CC-CEEEE
Confidence 00 111 0000 000111222 367899999999999884 477 99999999998654 3677764321 23 34589
Q ss_pred eeEEEeecCCcccccccccCCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCcc
Q 035933 161 GDLLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYKR 240 (405)
Q Consensus 161 ~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 240 (405)
+|+||+|||.+|.+|+.++............+...+..+.. + ...++.+.++++++++|.+++.
T Consensus 154 a~~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~~~~g~~~~~p~~~g~ 217 (500)
T 2qa1_A 154 AAYLVGCDGGRSSVRKAAGFDFPGTAATMEMYLADIKGVEL-------------Q---PRMIGETLPGGMVMVGPLPGGI 217 (500)
T ss_dssp ESEEEECCCTTCHHHHHTTCCCCEECCCCEEEEEEEESCCC-------------C---CEEEEEEETTEEEEEEEETTTE
T ss_pred eCEEEECCCcchHHHHHcCCCcCCCccceEEEEEEEEeCCC-------------C---CceEEEECCCcEEEEEEcCCCE
Confidence 99999999999999999854332222222333333333211 1 1134456677888999998876
Q ss_pred eeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccce-eeecccCCCCcCcccc
Q 035933 241 LNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFL-NLIADCDPLTQIYWDN 319 (405)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 319 (405)
..+.+........ ......+.+.+.+.+.+.. ...+. .....+. .........++|..+|
T Consensus 218 ~~~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~~---~~~~~----~~~~~~~~~~~~~~~~a~~~~~gr 278 (500)
T 2qa1_A 218 TRIIVCERGTPPQ------------RRETPPSWHEVADAWKRLT---GDDIA----HAEPVWVSAFGNATRQVTEYRRGR 278 (500)
T ss_dssp EEEEEEETTCCC-----------------CCCHHHHHHHHHHHH---SCCCT----TSEEEEEEEEECCEEECSCSEETT
T ss_pred EEEEEEcCCCCCc------------cccCCCCHHHHHHHHHHhc---CCCCC----ccceeEEEEeccCcEEccccccCC
Confidence 6665543222111 0001122333332222221 11110 0000111 0111123356777799
Q ss_pred EEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC-CCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcC
Q 035933 320 VVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG-PENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLG 391 (405)
Q Consensus 320 v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~-~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~ 391 (405)
|+|+|||||.++|++|||+|+||+||..|++.|.... +.....+|+.|+++|+++...++..++.+.+++..
T Consensus 279 v~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~~~g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~ 351 (500)
T 2qa1_A 279 VILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKLGAVVNGTATEELLDSYHSERHAVGKRLLMNTQAQGLLFLS 351 (500)
T ss_dssp EEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEEccccCCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999998753 34568899999999999999999999988888863
No 9
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=1.7e-38 Score=305.47 Aligned_cols=336 Identities=16% Similarity=0.117 Sum_probs=221.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
+++||+||||||+|+++|+.|+++|++|+||||.+.+.. .++++.++++++++|+++|+... +... .+.. ...
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~---~~r~~~l~~~~~~~l~~lGl~~~-~~~~-~~~~--~~~ 83 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTG---ESRGLGFTARTMEVFDQRGILPA-FGPV-ETST--QGH 83 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCC---CCCSEEECHHHHHHHHHTTCGGG-GCSC-CEES--EEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC---CCceeEECHHHHHHHHHCCCHHH-HHhc-cccc--cce
Confidence 468999999999999999999999999999999987643 56789999999999999988543 3322 1111 000
Q ss_pred eecCccceeeeecccCCcc-cccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeee
Q 035933 86 AVDREKNICRVLARDENFN-YLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~-~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d 162 (405)
..+ ..+. ........+ .+.++|..+++.|.+.+. .++ ++++++|++++.++ ..|++++.+ .+| ..++++|
T Consensus 84 -~~~-~~~~-~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~v~~~~-~~g-~~~~~a~ 156 (499)
T 2qa2_A 84 -FGG-RPVD-FGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEG--DHVVVEVEG-PDG-PRSLTTR 156 (499)
T ss_dssp -ETT-EEEE-GGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEEEEEEC-SSC-EEEEEEE
T ss_pred -ecc-eecc-cccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEEEEEEc-CCC-cEEEEeC
Confidence 111 0000 000111222 367899999999999884 477 99999999998544 357676432 123 3458999
Q ss_pred EEEeecCCcccccccccCCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCccee
Q 035933 163 LLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYKRLN 242 (405)
Q Consensus 163 ~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 242 (405)
+||+|||.+|.+|+.++............+...+..+.. + ...++.+.++++++++|.+++...
T Consensus 157 ~vVgADG~~S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~-------------~---~~~~~~~~~~g~~~~~P~~~g~~~ 220 (499)
T 2qa2_A 157 YVVGCDGGRSTVRKAAGFDFPGTSASREMFLADIRGCEI-------------T---PRPIGETVPLGMVMSAPLGDGVDR 220 (499)
T ss_dssp EEEECCCTTCHHHHHTTCCCCEECCCCCEEEEEEESCCC-------------C---CEEEEEEETTEEEEEEECSSSCEE
T ss_pred EEEEccCcccHHHHHcCCCCCCCCCccEEEEEEEEECCC-------------C---cceEEEECCCeEEEEEEcCCCEEE
Confidence 999999999999999854332221222233333332211 1 112445667788899999887766
Q ss_pred EEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccc--eeeecccCCCCcCccccE
Q 035933 243 WIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPF--LNLIADCDPLTQIYWDNV 320 (405)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v 320 (405)
+.+........ ......+.+.+.+.+.+.. ...+. .....+ .+.. .....++|..+||
T Consensus 221 ~~~~~~~~~~~------------~~~~~~~~~~~~~~l~~~~---~~~~~----~~~~~~~~~~~~-~~~~a~~~~~grv 280 (499)
T 2qa2_A 221 IIVCERGAPAR------------RRTGPPPYQEVAAAWQRLT---GQDIS----HGEPVWVSAFGD-PARQVSAYRRGRV 280 (499)
T ss_dssp EEEEETTCCCC------------CCSSSCCHHHHHHHHHHHH---SCCCT----TCEEEEEEEECC-CEEECSCSEETTE
T ss_pred EEEEecCCCCc------------cccCCCCHHHHHHHHHHHh---CCCCC----ccceeEEEEEeC-CcEEcccccCCCE
Confidence 65554222111 0011122333333222221 11110 000011 1111 1233467777999
Q ss_pred EEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC-CCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcC
Q 035933 321 VLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG-PENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLG 391 (405)
Q Consensus 321 ~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~-~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~ 391 (405)
+|+|||||.++|++|||+|+||+||..|++.|.... +.....+|+.|+++|+++...++..++.+.+++..
T Consensus 281 ~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~ 352 (499)
T 2qa2_A 281 LLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKLAAVVSGRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS 352 (499)
T ss_dssp EECGGGTEEECCCSSCHHHHHHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecccccCCCccccchhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999998753 33467899999999999999999999998888863
No 10
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=1.5e-39 Score=303.91 Aligned_cols=333 Identities=18% Similarity=0.144 Sum_probs=226.9
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
|+.+||+||||||+|+++|+.|+++|++|+||||.+.+.. .++++.+++.+.+.|+++++.. .+...+.+... .
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~---~~~~~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~--~ 82 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRA---FGAGIYLWHNGLRVLEGLGALD-DVLQGSHTPPT--Y 82 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCC---CSSEEEEEHHHHHHHHHTTCHH-HHHTTCBCCSC--E
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCC---CCceEEeCccHHHHHHHcCCHH-HHHhhCCCccc--e
Confidence 4568999999999999999999999999999999987643 5778999999999999998743 34433333221 1
Q ss_pred ceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeee
Q 035933 85 RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d 162 (405)
...+... ........ +.+.+.++|..|.+.|.+.+. .|+ ++++++|++++. ++ +|+ +.+|+. +++|
T Consensus 83 ~~~~~g~-~~~~~~~~-~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~---~v~---~~~g~~--~~ad 150 (379)
T 3alj_A 83 ETWMHNK-SVSKETFN-GLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG---RLT---LQTGEV--LEAD 150 (379)
T ss_dssp EEEETTE-EEEEECGG-GCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT---EEE---ETTSCE--EECS
T ss_pred EEEeCCc-eeeeccCC-CCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC---EEE---ECCCCE--EEcC
Confidence 2222211 11111111 334678999999999999884 578 999999999974 33 454 457764 8999
Q ss_pred EEEeecCCcccccccccCCCCCCcCceEEEEEEecCCC---CCCchhhhhhhhccCCCCCceeE--eecCCeEEEEEEee
Q 035933 163 LLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSE---NENSETIQGIRKAYPELGNGVHT--DLVPGTHTVLYELM 237 (405)
Q Consensus 163 ~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~ 237 (405)
+||+|||.+|.+|+.+.......+.++.++++.++... .... + ...... .+.++++++++|.+
T Consensus 151 ~vV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~p~~ 218 (379)
T 3alj_A 151 LIVGADGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGE----------W--DNTIDMWNFWPRVQRILYSPCN 218 (379)
T ss_dssp EEEECCCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSC----------T--TSEEEEECCSSSCCEEEEEECS
T ss_pred EEEECCCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCC----------c--ccccccceEECCCCEEEEEECC
Confidence 99999999999999987544455666777777766531 1000 0 001111 34667888999999
Q ss_pred CcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhc--CccceeeecccCCCCcC
Q 035933 238 YKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKET--KEPFLNLIADCDPLTQI 315 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 315 (405)
++...|++...... + .. ..-.+.+..+... .+.+.+++... .....+.++...+.++|
T Consensus 219 ~~~~~~~~~~~~~~-~---------~~-----~~l~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 278 (379)
T 3alj_A 219 ENELYLGLMAPAAD-P---------RG-----SSVPIDLEVWVEM-----FPFLEPCLIEAAKLKTARYDKYETTKLDSW 278 (379)
T ss_dssp SSEEEEEEEECTTC-T---------TT-----TCSSCCHHHHHHH-----CGGGHHHHHHHHTCTTCCEEEEEEEEESCS
T ss_pred CCcEEEEEEecCCC-C---------CH-----HHHHHHHhcCCch-----hccHHHHHhhCCccceEEecccccCCCCCc
Confidence 98877776654311 1 00 0001112221111 12122333321 12234444444456777
Q ss_pred ccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccchHHHHHHHHHhhhhh
Q 035933 316 YWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVTNKQVLHSRRVGLIK 389 (405)
Q Consensus 316 ~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~ 389 (405)
..+|++|||||||.++|++|||+|+||+||..|++.|... .+...+|..|+++|++++..++..|.....+.
T Consensus 279 ~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~--~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~ 350 (379)
T 3alj_A 279 TRGKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLEEG--SSVEDALVAWETRIRPITDRCQALSGDYAANR 350 (379)
T ss_dssp EETTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTTSS--SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhccc--cCHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 8899999999999999999999999999999999999764 35788999999999999999999996544443
No 11
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=8.4e-39 Score=316.98 Aligned_cols=354 Identities=15% Similarity=0.142 Sum_probs=228.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH-----cCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccc
Q 035933 7 KPKAIIVGGSIAGISCAKALIL-----AGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTI 81 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~-----~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (405)
++||+||||||+||++|+.|++ .|++|+||||++.+. ..++++.++++++++|+++|+.. .+...+.+..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~---~~gra~~l~~~tle~l~~lGl~~-~l~~~~~~~~- 82 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKV---YNGQADGLQCRTLESLKNLGLAD-KILSEANDMS- 82 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCC---CSCSCCEECHHHHHHHHTTTCHH-HHHTTCBCCC-
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCC---CCCceeEEChHHHHHHHHCCCHH-HHHHhccccc-
Confidence 5799999999999999999999 999999999997754 36788999999999999999854 4433333322
Q ss_pred cccceecCc--cceee--eec----ccCCcccccccHHHHHHHHHhcCC-Cc---e-EEecceEEEEEEec------CCC
Q 035933 82 DQNRAVDRE--KNICR--VLA----RDENFNYLQAHWTDLHGLIYNTLP-VE---I-VFWGHLYLTFCISH------DKS 142 (405)
Q Consensus 82 ~~~~~~~~~--~~~~~--~~~----~~~~~~~~~~~r~~l~~~L~~~~~-~~---~-i~~~~~v~~i~~~~------~~~ 142 (405)
....++.. ..+.. ... .....+...++|..+++.|.+.+. .+ + +++++++++++.++ +..
T Consensus 83 -~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~ 161 (665)
T 1pn0_A 83 -TIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAY 161 (665)
T ss_dssp -EEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCC
T ss_pred -eEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCC
Confidence 12222221 11111 111 112334567999999999999885 34 6 99999999998765 124
Q ss_pred eEEEEEeec---------------------------------------CCCceeEEeeeEEEeecCCcccccccccCCCC
Q 035933 143 TVNVKAKNL---------------------------------------RTDVIIDVVGDLLVAADGSRSSVRQTFLPDSK 183 (405)
Q Consensus 143 ~v~v~~~~~---------------------------------------~~g~~~~~~~d~vV~AdG~~S~vr~~l~~~~~ 183 (405)
.|++++.+. .+|+..+++||+||+|||.+|.||++++....
T Consensus 162 ~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~ 241 (665)
T 1pn0_A 162 PVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMI 241 (665)
T ss_dssp CEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCE
T ss_pred CEEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCC
Confidence 677776542 35654569999999999999999999854322
Q ss_pred CCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCcceeEEEEEeccccccccccccccc
Q 035933 184 LRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYKRLNWIWYITQPELACFILPFICIR 263 (405)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (405)
.. .+...+++++.... ..+|.......+...+.++++++|..++..++++..+....+ .
T Consensus 242 g~--~~~~~~~v~d~~~~----------~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~--------~- 300 (665)
T 1pn0_A 242 GE--QTDYIWGVLDAVPA----------SNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEK--------G- 300 (665)
T ss_dssp EE--EEEEEEEEEEEEEE----------CCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC--------------
T ss_pred CC--CccEEEEEEEEEEC----------CCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCcccc--------c-
Confidence 11 11122244332100 011221122223333567788899988866666655443210 0
Q ss_pred CCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecc--cCCCCcCc-cccEEEEccccccCCCCCchhhhh
Q 035933 264 GGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIAD--CDPLTQIY-WDNVVLIGDAAHPITPHCARSTNM 340 (405)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~v~lvGDAah~~~P~~G~G~~~ 340 (405)
........+.+.+.+ .+.+.+.+...+ ......+..+. ....++|. .+||+|+|||||.++|++|||+|+
T Consensus 301 ~~~~~~~~t~e~~~~---~~~~~~~~~~~~----~~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~ 373 (665)
T 1pn0_A 301 GRVDRTKFTPEVVIA---NAKKIFHPYTFD----VQQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNT 373 (665)
T ss_dssp -----CCCCHHHHHH---HHHHHHTTSCCE----EEEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHH
T ss_pred cccCcCCCCHHHHHH---HHHHHhCcccCc----eeeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcch
Confidence 000001122333322 222222211000 00111112221 23456777 699999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhC-CCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcCCCC
Q 035933 341 AIADAAVLGKCLERWG-PENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLGLPL 394 (405)
Q Consensus 341 al~da~~la~~l~~~~-~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~~~~ 394 (405)
||+||..|++.|.... +.....+|+.|+++|++++..++..++.+.+++...+.
T Consensus 374 gi~DA~nLawkLa~vl~g~a~~~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~~~ 428 (665)
T 1pn0_A 374 SMMDTYNLGWKLGLVLTGRAKRDILKTYEEERQPFAQALIDFDHQFSRLFSGRPA 428 (665)
T ss_dssp HHHHHHHHHHHHHHHHTTCBCGGGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCBC
T ss_pred hHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 9999999999997652 34567899999999999999999999999999876543
No 12
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=5.4e-37 Score=299.04 Aligned_cols=347 Identities=16% Similarity=0.046 Sum_probs=219.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccc---
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTID--- 82 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~--- 82 (405)
.++||+||||||+|+++|+.|+++|++|+||||.+.+.. .+++..++++++++|+++|+.. .+...+.+....
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~---~~~~~~l~~~~~~~l~~lGl~~-~~~~~~~~~~~~~~~ 79 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSP---YPRAAGQNPRTMELLRIGGVAD-EVVRADDIRGTQGDF 79 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCC---CCCSCCBCHHHHHHHHHTTCHH-HHHHSCCSSCTTSCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC---CCccceECHHHHHHHHHcCCHH-HHHhhCCCcccccce
Confidence 468999999999999999999999999999999987643 5668889999999999998844 444444433221
Q ss_pred ---ccceecCccceee---ee-------cccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCC--eEE
Q 035933 83 ---QNRAVDREKNICR---VL-------ARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKS--TVN 145 (405)
Q Consensus 83 ---~~~~~~~~~~~~~---~~-------~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~--~v~ 145 (405)
......+.. +.. .+ ......+...++|..|...|.+.+. .|+ ++++++|++++.++++. .|+
T Consensus 80 ~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~ 158 (535)
T 3ihg_A 80 VIRLAESVRGEI-LRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVT 158 (535)
T ss_dssp EEEEESSSSSCE-EEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEE
T ss_pred eeeEEeccCCce-eeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEE
Confidence 011111111 110 11 1112334567899999999999884 478 99999999998654311 666
Q ss_pred EEEeecCCCceeEEeeeEEEeecCCcccccccccCCCCC-CcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEe
Q 035933 146 VKAKNLRTDVIIDVVGDLLVAADGSRSSVRQTFLPDSKL-RYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTD 224 (405)
Q Consensus 146 v~~~~~~~g~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (405)
+++.+. ++ ..+++||+||+|||.+|.+|+.++..... .+... .....+... . ....+......++.
T Consensus 159 v~~~~~-~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~-~~~~~~~~~-~---------~~~~~~~~~~~~~~ 225 (535)
T 3ihg_A 159 ARLAGP-DG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTH-MVGVIFDAD-L---------SGIMEPGTTGWYYL 225 (535)
T ss_dssp EEEEET-TE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEE-EEEEEEECC-G---------GGTSCTTCCEEEEE
T ss_pred EEEEcC-CC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccce-EEEEEEecc-C---------hhhccCCceEEEEE
Confidence 664321 22 34589999999999999999998432221 11111 111111111 0 00011111223444
Q ss_pred ecCCeEEEEEEeeCc-ceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccce
Q 035933 225 LVPGTHTVLYELMYK-RLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFL 303 (405)
Q Consensus 225 ~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (405)
..++...+++|...+ ...+.|........ .....+++.+.+.+.+........+ .......
T Consensus 226 ~~p~~~~~~~p~~~~~~~~~~~~~~~~~~~-------------~~~~~~~e~~~~~l~~~~~~~~~~~-----~~~~~~~ 287 (535)
T 3ihg_A 226 HHPEFKGTFGPTDRPDRHTLFVEYDPDEGE-------------RPEDFTPQRCVELIGLALDAPEVKP-----ELVDIQG 287 (535)
T ss_dssp ECSSCEEEEEECSSTTEEEEEEEECTTTTC-------------CGGGCCHHHHHHHHHHHHTCSSCCC-----EEEEEEE
T ss_pred ECCCceEEEEEecCCCEEEEEEeeCccccC-------------ccccCCHHHHHHHHHHHhCCCCCce-----eEEEeeE
Confidence 466677778888763 33333333332111 0112233333333332221100000 0001112
Q ss_pred eeecccCCCCcCccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC-CCcHHHHHHHHHhhcccchHHHHHHH
Q 035933 304 NLIADCDPLTQIYWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG-PENLHSALEEHKSVRLPVTNKQVLHS 382 (405)
Q Consensus 304 ~~~~~~~~~~~~~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~-~~~~~~~l~~y~~~r~~~~~~~~~~s 382 (405)
+.+. ....++|..+||+|+|||||.++|++|||+|+||+||..|++.|.... +.....+|+.|+++|++++..++..|
T Consensus 288 ~~~~-~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p~a~~~~~~s 366 (535)
T 3ihg_A 288 WEMA-ARIAERWREGRVFLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKVAAELVVAEA 366 (535)
T ss_dssp EEEE-EEEESCSEETTEEECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eeee-EEEECccccCCEEEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHHHHHHHHHHH
Confidence 2222 334567778999999999999999999999999999999999998762 34567889999999999999999999
Q ss_pred HHhhhhh
Q 035933 383 RRVGLIK 389 (405)
Q Consensus 383 ~~~~~~~ 389 (405)
+.+.+.+
T Consensus 367 ~~~~~~~ 373 (535)
T 3ihg_A 367 LAIYAQR 373 (535)
T ss_dssp HHHHHHH
T ss_pred HHhhHhh
Confidence 9887654
No 13
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=6.1e-38 Score=305.49 Aligned_cols=340 Identities=19% Similarity=0.076 Sum_probs=217.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
++||+||||||+|+++|+.|+++|++|+||||.+.+.. .++++.+++.++++|+++|+.. .+.......... .
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~---~~r~~~l~~~s~~~l~~lGl~~-~l~~~~~~~~~~---~ 121 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVG---HDRAGALHIRTVETLDLRGLLD-RFLEGTQVAKGL---P 121 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCC---SSSCCCBCHHHHHHHHTTTCHH-HHTTSCCBCSBC---C
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCC---CceEEEECHHHHHHHHHcCChH-HHHhcCcccCCc---e
Confidence 57999999999999999999999999999999987643 5678899999999999998844 444333322110 0
Q ss_pred ecCcc--ceeeeecccCCc-ccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEee
Q 035933 87 VDREK--NICRVLARDENF-NYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVG 161 (405)
Q Consensus 87 ~~~~~--~~~~~~~~~~~~-~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~ 161 (405)
..+.. .+... ...... ..+.++|..+.+.|.+.+. .|+ ++++++|++++. ++..++|++. ..+|+ .++++
T Consensus 122 ~~~~~~~~~~~~-~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~--~~~~v~v~~~-~~~G~-~~~~a 196 (570)
T 3fmw_A 122 FAGIFTQGLDFG-LVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQ--DAEAVEVTVA-GPSGP-YPVRA 196 (570)
T ss_dssp BTTBCTTCCBGG-GSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCB--CSSCEEEEEE-ETTEE-EEEEE
T ss_pred eCCccccccccc-ccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEE--cCCeEEEEEE-eCCCc-EEEEe
Confidence 11110 00000 011112 2456899999999999885 478 999999999984 4445666632 24562 34899
Q ss_pred eEEEeecCCcccccccccCCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEE-EEeeCcc
Q 035933 162 DLLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVL-YELMYKR 240 (405)
Q Consensus 162 d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~ 240 (405)
|+||+|||.+|.+|+.++............+...+..+... ....+.+.+.+++++ +|.+++.
T Consensus 197 ~~vV~ADG~~S~vR~~lGi~~~~~~~~~~~~~~~v~~~~~~----------------~~~~~~~~~~G~~~~~~P~~~g~ 260 (570)
T 3fmw_A 197 RYGVGCDGGRSTVRRLAADRFPGTEATVRALIGYVTTPERE----------------VPRRWERTPDGILVLAFPPEGGL 260 (570)
T ss_dssp SEEEECSCSSCHHHHHTTCCCCCCCCCEEEEEEECCCCSCS----------------SCCCCCCCCSSCEEECCCC----
T ss_pred CEEEEcCCCCchHHHHcCCCCccceeeeEEEEEEEEecCCC----------------cceEEEecCCEEEEEEeecCCCe
Confidence 99999999999999998544333323333333333322111 001112344455555 7888887
Q ss_pred e-eEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCc-cc-eeeecccCCCCcCcc
Q 035933 241 L-NWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKE-PF-LNLIADCDPLTQIYW 317 (405)
Q Consensus 241 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ 317 (405)
. +++|+....... ......+. +++.+.+...+...+.. .... .. .+.+. ..+.+.|..
T Consensus 261 ~~~i~~~~~~~~~~------------~~~~~~~~---~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~-~~~a~~~~~ 321 (570)
T 3fmw_A 261 GPGWSSSSTGHSPA------------ADEGPVTL---EDLGAAVARVRGTPLTL---TEPVSWLSRFGDA-SRQAKRYRS 321 (570)
T ss_dssp --CEEEEEESCC-----------------CCCCH---HHHHHHTTSSSSCCCCC---CSCCEEEEEECCC-CEECSCSEE
T ss_pred EEEEEEEeCCCCcc------------ccccCCCH---HHHHHHHHHHhhccccc---ceeeeeeEEeecc-ccccccccc
Confidence 7 787776543221 00011122 23333332222211100 0011 11 11111 233567777
Q ss_pred ccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC-CCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcCCC
Q 035933 318 DNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG-PENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLGLP 393 (405)
Q Consensus 318 ~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~-~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~~~ 393 (405)
+||+|+|||||.++|++|||+|+||+||..|++.|.... +.....+|+.|+++|+++...++..++.+.+++...+
T Consensus 322 grv~LvGDAAH~~~P~~GqG~n~gl~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~~ 398 (570)
T 3fmw_A 322 GRVLLAGDAAHVHFPIGGQGLNTGLQDAVNLGWKLAARVRGWGSEELLDTYHDERHPVAERVLLNTRAQLALMRPDE 398 (570)
T ss_dssp TTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCT
T ss_pred CCEEEEEecceecCCCcCcCHhHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999999999999999997752 3457899999999999999999999999999887643
No 14
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=2.1e-37 Score=301.89 Aligned_cols=343 Identities=18% Similarity=0.087 Sum_probs=212.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccc----
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTID---- 82 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~---- 82 (405)
++||+||||||+|+++|+.|+++|++|+||||.+.+.. .+++..++++++++|+++|+.. .+...+.+....
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~---~~~~~~l~~~~~~~l~~lGl~~-~~~~~~~~~~~~~~~~ 101 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTIT---HPRVGTIGPRSMELFRRWGVAK-QIRTAGWPGDHPLDAA 101 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCS---SCCCCEECHHHHHHHHHTTCHH-HHHTSSCCTTSBCCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCC---CCceeeeCHHHHHHHHHcCChH-HHHhhcCCcccccceE
Confidence 57999999999999999999999999999999987643 5668889999999999998744 444444433110
Q ss_pred ccceecCccceeeee-cc--------cCCcccccccHHHHHHHHHhcCCCceEEecceEEEEEEecCCCeEEEEEeecCC
Q 035933 83 QNRAVDREKNICRVL-AR--------DENFNYLQAHWTDLHGLIYNTLPVEIVFWGHLYLTFCISHDKSTVNVKAKNLRT 153 (405)
Q Consensus 83 ~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~r~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~~~v~v~~~~~~~ 153 (405)
......+.. +.... .. ....+...++|..+++.|.+.+.+. ++++++|++++.++ ..|++++.+..+
T Consensus 102 ~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-v~~~~~v~~~~~~~--~~v~v~~~~~~~ 177 (549)
T 2r0c_A 102 WVTRVGGHE-VYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-LRTRSRLDSFEQRD--DHVRATITDLRT 177 (549)
T ss_dssp EESSBTSCE-EEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-EECSEEEEEEEECS--SCEEEEEEETTT
T ss_pred EeccCCCce-eEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-cccCcEEEEEEEeC--CEEEEEEEECCC
Confidence 000011111 11110 00 1223456789999999999988655 99999999998544 457777554444
Q ss_pred CceeEEeeeEEEeecCCcccccccccCCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCC-eEEE
Q 035933 154 DVIIDVVGDLLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPG-THTV 232 (405)
Q Consensus 154 g~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 232 (405)
|+..+++||+||+|||.+|.+|+.++............+...+..+.. . .. .+......++.+.++ ...+
T Consensus 178 G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~--~----~~---~~~~~~~~~~~~~p~~~~~~ 248 (549)
T 2r0c_A 178 GATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPEL--R----SL---LGERAALFFFLMLSSSLRFP 248 (549)
T ss_dssp CCEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTH--H----HH---HGGGCCSEEEEEEETTEEEE
T ss_pred CCEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCch--H----Hh---cCCCCceEEEEECCCCcEEE
Confidence 755569999999999999999999854332221112233333332210 0 00 000112234444455 6778
Q ss_pred EEEeeCcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecccCCC
Q 035933 233 LYELMYKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIADCDPL 312 (405)
Q Consensus 233 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (405)
++|..++ ..|.++.+.+ .+ . .+.+.+.+.+.+. +.+.+. . .......+.+. ..+.
T Consensus 249 ~~p~~~~-~~~~~~~~~~-~~------------~----~~~~~~~~~l~~~---~~~~~~--~-~~~~~~~~~~~-~~~a 303 (549)
T 2r0c_A 249 LRALDGR-GLYRLTVGVD-DA------------S----KSTMDSFELVRRA---VAFDTE--I-EVLSDSEWHLT-HRVA 303 (549)
T ss_dssp EEESSSS-SEEEEEEECS-TT------------C----CSCCCHHHHHHHH---BCSCCC--C-EEEEEEEEEEC-CEEC
T ss_pred EEEECCC-cEEEEEecCC-CC------------C----CCHHHHHHHHHHH---hCCCCc--e-eEEEEecchhH-hhhH
Confidence 8888553 3455554221 11 0 1111222222222 221110 0 00001112222 3345
Q ss_pred CcCccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC-CCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcC
Q 035933 313 TQIYWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG-PENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLG 391 (405)
Q Consensus 313 ~~~~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~-~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~ 391 (405)
++|..+||+|+|||||.++|++|||+|+||+||..|++.|.... +.....+|+.|+++|++++..++..|+.+.+++..
T Consensus 304 ~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~ 383 (549)
T 2r0c_A 304 DSFSAGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRPVAITSLEEANVNLRRTMD 383 (549)
T ss_dssp SCSEETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHHHHHHHHHC----------
T ss_pred HhhcCCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 67778999999999999999999999999999999999998752 23456789999999999999999999998887754
No 15
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=3.1e-38 Score=296.75 Aligned_cols=346 Identities=15% Similarity=0.103 Sum_probs=213.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
++||+||||||+|+++|+.|++.|++|+||||.+.+......+.+ .+++.+.++|+++|+.. .+.....+.. ....
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g-~l~~~~~~~l~~lg~~~-~~~~~~~~~~--~~~~ 77 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAG-VLEQGMVDLLREAGVDR-RMARDGLVHE--GVEI 77 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCC-EECHHHHHHHHHTTCCH-HHHHHCEEES--CEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceE-eECHHHHHHHHHcCCcH-HHHhcCCccc--eEEE
Confidence 479999999999999999999999999999998752100112223 48999999999998854 3333222221 1111
Q ss_pred ecCccceeeeecc-cCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeE
Q 035933 87 VDREKNICRVLAR-DENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 87 ~~~~~~~~~~~~~-~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 163 (405)
............. ..+...+.+++..+.+.|.+.+ +.++ ++++++|++++.++ +..+.|++. .+|+..++++|+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~~~--~~g~~~~~~a~~ 154 (394)
T 1k0i_A 78 AFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQ-GERPYVTFE--RDGERLRLDCDY 154 (394)
T ss_dssp EETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTT-SSSCEEEEE--ETTEEEEEECSE
T ss_pred EECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEec-CCceEEEEe--cCCcEEEEEeCE
Confidence 1111101000100 0123345678888888888876 3577 99999999997432 234666631 477644589999
Q ss_pred EEeecCCcccccccccCCCCCCcCce--EEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCcce
Q 035933 164 LVAADGSRSSVRQTFLPDSKLRYTGY--CAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYKRL 241 (405)
Q Consensus 164 vV~AdG~~S~vr~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 241 (405)
||+|||.+|.+|+.+.......+... ..+.++....... ... ..+...++++.++.|..++..
T Consensus 155 vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~-~~~~~~~~g~~~~~~~~~~~~ 219 (394)
T 1k0i_A 155 IAGCDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPV--------------SHE-LIYANHPRGFALCSQRSATRS 219 (394)
T ss_dssp EEECCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCS--------------CSS-CEEECCTTCCEEEEEEETTEE
T ss_pred EEECCCCCcHHHHhcCccccccccccccceeEEEecCCCCC--------------ccc-eEEEEcCCceEEEEecCCCcE
Confidence 99999999999998854322223222 2344443211100 011 122233455555555555666
Q ss_pred eEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCcc--ceeeecccCCCCcCcccc
Q 035933 242 NWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEP--FLNLIADCDPLTQIYWDN 319 (405)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 319 (405)
+|.+........ . ..+.+ .+.+++.+.+...+...+...... ....+. ....+++..+|
T Consensus 220 ~~~~~~~~~~~~--------------~-~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gr 280 (394)
T 1k0i_A 220 QYYVQVPLSEKV--------------E-DWSDE---RFWTELKARLPSEVAEKLVTGPSLEKSIAPLR-SFVVEPMQHGR 280 (394)
T ss_dssp EEEEEECTTCCG--------------G-GCCHH---HHHHHHHHTSCHHHHHHCCCCCEEEEEEEEEE-EEEEECSEETT
T ss_pred EEEEEeCCCCCc--------------c-ccCHH---HHHHHHHHhhCcccccccccCcceeeEEEEhh-hhhccccccCC
Confidence 666654432111 0 11121 222333333444332111111110 111111 11234566799
Q ss_pred EEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcCCC
Q 035933 320 VVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLGLP 393 (405)
Q Consensus 320 v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~~~ 393 (405)
++|||||||.++|+.|||+|+||+||..|+++|......+..++|+.|+++|++++...+..|+.++.+++..+
T Consensus 281 v~LvGDAAh~~~P~~GqG~~~ai~da~~La~~L~~~~~~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~ 354 (394)
T 1k0i_A 281 LFLAGDAAHIVPPTGAKGLNLAASDVSTLYRLLLKAYREGRGELLERYSAICLRRIWKAERFSWWMTSVLHRFP 354 (394)
T ss_dssp EEECGGGTEECCGGGTCHHHHHHHHHHHHHHHHHHHHHHCCGGGGGGHHHHHHHHHHHHHHHHHHHHHHHSCCT
T ss_pred EEEEechhhcCCCcccchHHHHHHHHHHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999999999999999976521124578999999999999999999999999888554
No 16
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=2.9e-36 Score=291.93 Aligned_cols=353 Identities=13% Similarity=0.090 Sum_probs=228.5
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHH-HHHHhccChhhhhcccCCc
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQK-IVKSWLHQPDLLHNITLPL 79 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~~~~~~~~~~~~~ 79 (405)
|+++++++||+||||||||+++|+.|+++|++|+||||.+.+.. +.+..+.+.... +++.+++.. .+.....+.
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~----~~g~~~~~~~~~~~l~~lgl~~-~~~~~~~~~ 75 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRH----QIGESLLPATVHGICAMLGLTD-EMKRAGFPI 75 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCC----CSCCBCCHHHHTTHHHHTTCHH-HHHTTTCCE
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCC----CCCcccCcchHHHHHHHhCcHH-HHHHcCCcc
Confidence 55445568999999999999999999999999999999986532 345566676554 788887743 444333332
Q ss_pred cccccceecCcc-ceeeeec---ccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCC-eEEEEEeecC
Q 035933 80 TIDQNRAVDREK-NICRVLA---RDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKS-TVNVKAKNLR 152 (405)
Q Consensus 80 ~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~-~v~v~~~~~~ 152 (405)
.......+.... .....+. .......+.++|..|.+.|.+.+. .|+ ++++++|+++..+++.. +|++. ..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~---~~ 152 (512)
T 3e1t_A 76 KRGGTFRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYR---NT 152 (512)
T ss_dssp ECEEEEECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEE---CS
T ss_pred ccCceEEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEE---eC
Confidence 211111111111 0000111 112233467999999999999874 588 99999999998643211 23333 55
Q ss_pred CCceeEEeeeEEEeecCCcccccccccCCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEE
Q 035933 153 TDVIIDVVGDLLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTV 232 (405)
Q Consensus 153 ~g~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (405)
+|+..++++|+||+|||.+|.+|+.+.......+.....+.+++........ +. ....+....++++++
T Consensus 153 dG~~~~i~ad~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~----------~~-~~~~~~~~~~~G~~~ 221 (512)
T 3e1t_A 153 EGVELMAHARFIVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPA----------PR-QGNILSAAFQDGWFW 221 (512)
T ss_dssp SSCEEEEEEEEEEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCST----------TC-TTSEEEEEETTEEEE
T ss_pred CCCEEEEEcCEEEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCC----------CC-cCceEEEEeCCceEE
Confidence 6765569999999999999999999843322333445556665543221110 11 122233445678999
Q ss_pred EEEeeCcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceee---e--c
Q 035933 233 LYELMYKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNL---I--A 307 (405)
Q Consensus 233 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~ 307 (405)
.+|+.++..++.|.+...... . ......+.++.+ .. +.+.+.+.+........+. + .
T Consensus 222 ~~Pl~~~~~~vg~~~~~~~~~------------~-~~~~~~~~~~~~----l~-~~p~~~~~l~~~~~~~~~~~~~i~~~ 283 (512)
T 3e1t_A 222 YIPLSDTLTSVGAVVSREAAE------------A-IKDGHEAALLRY----ID-RCPIIKEYLAPATRVTTGDYGEIRIR 283 (512)
T ss_dssp EEECSSSEEEEEEEEEHHHHT------------T-TSSCHHHHHHHH----HH-TSHHHHHHHTTCEECCSSTTSSCEEE
T ss_pred EEEeCCCeEEEEEEecHHHhh------------h-hcCCHHHHHHHH----HH-hCchHHHHHhcCccccccccccceee
Confidence 999999888888877654332 0 001122223222 22 4677776665432211000 0 0
Q ss_pred --ccCCCCcCccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC--CCcHHHHHHHHHhhcccchHHHHHHHH
Q 035933 308 --DCDPLTQIYWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG--PENLHSALEEHKSVRLPVTNKQVLHSR 383 (405)
Q Consensus 308 --~~~~~~~~~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~--~~~~~~~l~~y~~~r~~~~~~~~~~s~ 383 (405)
...+.+++..+|++|||||||+++|+.|||+|+|++||..|++.|.... +.+...+|+.|++.|+++...+.+...
T Consensus 284 ~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~~~~~~~~~ 363 (512)
T 3e1t_A 284 KDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREYGNFYQFLV 363 (512)
T ss_dssp ESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccCCEEEEechhhcCCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112345667899999999999999999999999999999999998764 346788999999999999999988887
Q ss_pred Hhhhhhc
Q 035933 384 RVGLIKL 390 (405)
Q Consensus 384 ~~~~~~~ 390 (405)
....+..
T Consensus 364 ~~y~~~~ 370 (512)
T 3e1t_A 364 AFYDMNQ 370 (512)
T ss_dssp HHHHHCC
T ss_pred HHHhhhc
Confidence 7666554
No 17
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=3.9e-37 Score=304.75 Aligned_cols=352 Identities=16% Similarity=0.182 Sum_probs=215.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHH-cCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALIL-AGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~-~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
.++||+||||||+|+++|+.|++ .|++|+||||.+.+.. .++++.++++++++|+++|+.. .+...+.+.. ..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~---~g~a~~l~~~t~e~l~~lGl~~-~~~~~~~~~~--~~ 104 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPME---LGQADGIACRTMEMFEAFEFAD-SILKEACWIN--DV 104 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCS---SCSCCEECHHHHHHHHHTTCHH-HHHHHSEEEC--EE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC---CCceeeeCHHHHHHHHHcCcHH-HHHHhccccc--ce
Confidence 45799999999999999999999 9999999999987643 5778899999999999998754 3333232221 11
Q ss_pred ceecC----ccceee--eec----ccCCcccccccHHHHHHHHHhcCC-C--ce-EEecceEEEEEEecC--CCeEEEEE
Q 035933 85 RAVDR----EKNICR--VLA----RDENFNYLQAHWTDLHGLIYNTLP-V--EI-VFWGHLYLTFCISHD--KSTVNVKA 148 (405)
Q Consensus 85 ~~~~~----~~~~~~--~~~----~~~~~~~~~~~r~~l~~~L~~~~~-~--~~-i~~~~~v~~i~~~~~--~~~v~v~~ 148 (405)
..+.. ...+.. ... .....+...++|..+++.|.+.+. . ++ ++++++|++++.+++ +..|+|++
T Consensus 105 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~ 184 (639)
T 2dkh_A 105 TFWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTL 184 (639)
T ss_dssp EEEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEE
T ss_pred EEECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEE
Confidence 12211 011111 111 112234567899999999999874 2 44 999999999987653 23577775
Q ss_pred eec---CCCceeEEeeeEEEeecCCcccccccccCCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEee
Q 035933 149 KNL---RTDVIIDVVGDLLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDL 225 (405)
Q Consensus 149 ~~~---~~g~~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (405)
.+. .+|+..++++|+||+|||.+|.+|+.++.......... .| +++..... ..+|.......+..
T Consensus 185 ~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~-~~-~~~~~~~~----------~~~p~~~~~~~~~~ 252 (639)
T 2dkh_A 185 ERCDAAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQ-AW-GVMDVLAV----------TDFPDVRYKVAIQS 252 (639)
T ss_dssp EECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSC-CE-EEEEEEEE----------ECCTTTTSEEEEEE
T ss_pred EeccccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccc-eE-EEEEEEEc----------cCCCccceeEEEEc
Confidence 431 25655569999999999999999999854322111111 11 22211000 00111111122222
Q ss_pred cCCeEEEEEEeeCc-ceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCcccee
Q 035933 226 VPGTHTVLYELMYK-RLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLN 304 (405)
Q Consensus 226 ~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (405)
++++++++|..++ ...+++........ ........+.+.+.+...+. +.+.. + .......+
T Consensus 253 -~~g~~~~~P~~~~~~~r~~~~~~~~~~~----------~~~~~~~~~~e~~~~~~~~~---~~~~~---~-~~~~~~~~ 314 (639)
T 2dkh_A 253 -EQGNVLIIPREGGHLVRFYVEMDKLDAD----------ERVASRNITVEQLIATAQRV---LHPYK---L-EVKNVPWW 314 (639)
T ss_dssp -TTEEEEEEECTTSSCEEEEEECC---------------------CCCHHHHHHHHHHH---HTTSC---E-EEEEEEEE
T ss_pred -CCceEEEEEcCCCcEEEEEEECCCcCcc----------cccccCCCCHHHHHHHHHHH---hCccc---C-cceeeeEE
Confidence 6778888998877 55555544331000 00000112222222222221 11100 0 00011111
Q ss_pred eecc--cCCCCcCc------------cccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC-CCcHHHHHHHHHh
Q 035933 305 LIAD--CDPLTQIY------------WDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG-PENLHSALEEHKS 369 (405)
Q Consensus 305 ~~~~--~~~~~~~~------------~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~-~~~~~~~l~~y~~ 369 (405)
..+. ....+.|. .+||+|+|||||.++|++|||+|+||+||..|++.|.... +.....+|+.|++
T Consensus 315 ~~~~~~~~~a~~~~~~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~ 394 (639)
T 2dkh_A 315 SVYEIGQRICAKYDDVVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSS 394 (639)
T ss_dssp EEECCCCEECSCSBSCCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHH
T ss_pred EecccccchhhhhhccccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 2221 12234454 7999999999999999999999999999999999998752 3355788999999
Q ss_pred hcccchHHHHHHHHHhhhhhcCCC
Q 035933 370 VRLPVTNKQVLHSRRVGLIKLGLP 393 (405)
Q Consensus 370 ~r~~~~~~~~~~s~~~~~~~~~~~ 393 (405)
+|++++..++..++.+.+++...+
T Consensus 395 eR~~~a~~~~~~s~~~~~~~~~~~ 418 (639)
T 2dkh_A 395 ERQVVAQQLIDFDREWAKMFSDPA 418 (639)
T ss_dssp HHHHHHHHHHHHHHHSCC------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999998887643
No 18
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=5.4e-37 Score=292.99 Aligned_cols=350 Identities=15% Similarity=0.093 Sum_probs=222.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
+++||+||||||||+++|+.|+++|++|+||||.+.+.... ...+..+ +...+++++............ .....
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~-~~~g~~l---~~~~l~~lg~~~~~~~~~~~~--~~~~~ 78 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGD-KPCGDAV---SKAHFDKLGMPYPKGEELENK--INGIK 78 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTC-SCCCCEE---EHHHHHHTTCCCCCGGGEEEE--EEEEE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCc-ccccccc---cHHHHHHhcCCCCchHHHHhh--hcceE
Confidence 35899999999999999999999999999999988653211 1122233 456778776532110100000 00111
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEE-EEEeecCCCceeEEeee
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVN-VKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~-v~~~~~~~g~~~~~~~d 162 (405)
............ ....+.++|..|.+.|.+.+. .|+ ++++++|+++..++ +.++ |++....+|+..+++||
T Consensus 79 ~~~~~~~~~~~~----~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad 152 (453)
T 3atr_A 79 LYSPDMQTVWTV----NGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSK 152 (453)
T ss_dssp EECTTSSCEEEE----EEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECS
T ss_pred EECCCCceEEeE----CCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcC
Confidence 111111000000 112456899999999999874 578 99999999998543 3443 44322116665569999
Q ss_pred EEEeecCCcccccccccCCCC---CCc--CceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEee----cCCeEEEE
Q 035933 163 LLVAADGSRSSVRQTFLPDSK---LRY--TGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDL----VPGTHTVL 233 (405)
Q Consensus 163 ~vV~AdG~~S~vr~~l~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 233 (405)
+||+|||.+|.+|+.+..... ..+ ....+++..+..+..... .....+++ .+++++|+
T Consensus 153 ~VV~AdG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~g~~~~ 219 (453)
T 3atr_A 153 VVVEATGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIED-------------HDYLRIFIDQETSPGGYWWY 219 (453)
T ss_dssp EEEECCGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTT-------------TTEEEEECCTTTSTTSCEEE
T ss_pred EEEECcCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccC-------------CCeEEEEECCCCCCCcEEEE
Confidence 999999999999998864321 112 224556665544322100 01111222 35678899
Q ss_pred EEeeCcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecccCCCC
Q 035933 234 YELMYKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIADCDPLT 313 (405)
Q Consensus 234 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (405)
+|..++..++.+........ ....+.+.+++++..+.|... +++ ......+....+.+
T Consensus 220 ~P~~~~~~~vg~~~~~~~~~----------------~~~~~~~~~~l~~~~~~~~~~--~~~----~~~~~~~p~~~~~~ 277 (453)
T 3atr_A 220 FPKGKNKVNVGLGIQGGMGY----------------PSIHEYYKKYLDKYAPDVDKS--KLL----VKGGALVPTRRPLY 277 (453)
T ss_dssp EEEETTEEEEEEEEESSSCC----------------CCHHHHHHHHHHHHCTTEEEE--EEE----EEEEEEEECSSCCS
T ss_pred EECCCCeEEEEEEecCCCCC----------------CCHHHHHHHHHHhhhhhcCCC--eEE----eccceeccCCCCCC
Confidence 99999888887776543211 011233333333221111110 000 11112223345667
Q ss_pred cCccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC--CCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcC
Q 035933 314 QIYWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG--PENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLG 391 (405)
Q Consensus 314 ~~~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~--~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~ 391 (405)
.|..+|++|||||||+++|++|||+++||+||..||++|.+.. ++...++|+.|+++|++++...+..++.+.+++..
T Consensus 278 ~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~~ 357 (453)
T 3atr_A 278 TMAWNGIIVIGDSGFTVNPVHGGGKGSAMISGYCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDIFRRFLQK 357 (453)
T ss_dssp CSEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSTTTTTHHHHHHHHHTHHHHHHHHHHHHHHTT
T ss_pred ceecCCEEEEeCcccCCCCCccccHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999999999999998652 23346789999999999999999999999999887
Q ss_pred CCCCCccccee
Q 035933 392 LPLPDRGLLIQ 402 (405)
Q Consensus 392 ~~~~~~~~~~~ 402 (405)
..++.+++++.
T Consensus 358 ~~~~~~~~~~~ 368 (453)
T 3atr_A 358 LSNDDINYGMK 368 (453)
T ss_dssp CCHHHHHHHHH
T ss_pred cCcHhHHHHHH
Confidence 76666666653
No 19
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=3e-35 Score=276.79 Aligned_cols=349 Identities=14% Similarity=0.050 Sum_probs=220.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
+++||+||||||||+++|+.|+++|++|+||||.+.+.....++. .++ ...++++++... ......+ .....
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~--~~~---~~~~~~lg~~~~-~~~~~~~--~~~~~ 74 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGE--GLS---KGILNEADIKAD-RSFIANE--VKGAR 74 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCC--EEE---THHHHHTTCCCC-TTTEEEE--ESEEE
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCccccc--ccC---HHHHHHcCCCCC-hHHhhhh--cceEE
Confidence 458999999999999999999999999999999986543222332 232 256777766332 1110011 11111
Q ss_pred eecCccc--eeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEE-EEEeecCCCceeEEe
Q 035933 86 AVDREKN--ICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVN-VKAKNLRTDVIIDVV 160 (405)
Q Consensus 86 ~~~~~~~--~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~-v~~~~~~~g~~~~~~ 160 (405)
..+.... .............+.++|..|.+.|.+.+. .|+ ++++++|++++.+ ++.++ |++... ++..+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~--~~~v~gv~~~~~--~~~~~~~ 150 (397)
T 3cgv_A 75 IYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKE--NGKVAGAKIRHN--NEIVDVR 150 (397)
T ss_dssp EECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEE--TTEEEEEEEEET--TEEEEEE
T ss_pred EEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEe--CCEEEEEEEEEC--CeEEEEE
Confidence 1111110 111111011223567899999999999885 478 9999999999864 34554 554332 3333599
Q ss_pred eeEEEeecCCcccccccccCCC-CCCcCce-EEEEEEecCCCCCCchhhhhhhhccCCCCCceeEe---ecCCeEEEEEE
Q 035933 161 GDLLVAADGSRSSVRQTFLPDS-KLRYTGY-CAWRGVFDFSENENSETIQGIRKAYPELGNGVHTD---LVPGTHTVLYE 235 (405)
Q Consensus 161 ~d~vV~AdG~~S~vr~~l~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~p 235 (405)
||+||+|||.+|.+|+.+.... ......+ ..+...+...... .....+. ..++++.+++|
T Consensus 151 a~~vV~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~g~~~~~P 215 (397)
T 3cgv_A 151 AKMVIAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVD---------------PDYTDFYLGSIAPAGYIWVFP 215 (397)
T ss_dssp EEEEEECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCC---------------TTEEEEECSTTSTTEEEEEEE
T ss_pred cCEEEECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCC---------------CCcEEEEeCCcCCCceEEEEE
Confidence 9999999999999999885443 2212222 1222222221111 1111222 25678899999
Q ss_pred eeCcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecccCCCCcC
Q 035933 236 LMYKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIADCDPLTQI 315 (405)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (405)
..++..++.+....+... ......+.++++... .+.+.. ..........+....+.+.+
T Consensus 216 ~~~~~~~vg~~~~~~~~~------------------~~~~~~~~l~~~~~~-~~~~~~--~~~~~~~~~~~p~~~~~~~~ 274 (397)
T 3cgv_A 216 KGEGMANVGIGSSINWIH------------------NRFELKNYLDRFIEN-HPGLKK--GQDIQLVTGGVSVSKVKMPI 274 (397)
T ss_dssp EETTEEEEEEEEETTTCS------------------CHHHHHHHHHHHHHT-CHHHHT--SEEEEEEEEEEECCCCCSCC
T ss_pred CCCCeEEEEEEecccccc------------------CCCCHHHHHHHHHHh-CcCCCC--CeEEeeeeeeeecCCCccce
Confidence 999888888877654321 111222223333222 222210 00001111122222455677
Q ss_pred ccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC--CCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcCCC
Q 035933 316 YWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG--PENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLGLP 393 (405)
Q Consensus 316 ~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~--~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~~~ 393 (405)
..+|++++|||||.++|++|||+++|++||..|++.|.+.. ++....+|+.|+++|++++.+.+..++.+.+++...+
T Consensus 275 ~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (397)
T 3cgv_A 275 TMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAMLS 354 (397)
T ss_dssp EETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred eeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 77999999999999999999999999999999999997652 3556789999999999999999999999999998877
Q ss_pred CCCccccee
Q 035933 394 LPDRGLLIQ 402 (405)
Q Consensus 394 ~~~~~~~~~ 402 (405)
+++++++++
T Consensus 355 ~~~~~~~~~ 363 (397)
T 3cgv_A 355 DDTLDKLVD 363 (397)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777666554
No 20
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=5.6e-35 Score=285.01 Aligned_cols=345 Identities=13% Similarity=0.076 Sum_probs=225.3
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccc
Q 035933 4 RMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQ 83 (405)
Q Consensus 4 ~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (405)
||+++||+||||||||+++|+.|+++|++|+|||+.+.+.. +.|..+.+.+...++.+|+.. .+...........
T Consensus 20 ~M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~----~~G~~l~p~~~~~l~~lGl~~-~l~~~~~~~~~~~ 94 (591)
T 3i3l_A 20 HMTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRY----RVGESLLPGTMSILNRLGLQE-KIDAQNYVKKPSA 94 (591)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCC----CCCCBCCHHHHHHHHHTTCHH-HHHHHCCEEECEE
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCC----ceeeeECHHHHHHHHHcCCcH-HHHhcCCcccCCc
Confidence 45679999999999999999999999999999999976542 447788999999999998743 3333332221111
Q ss_pred cceecCcc-ceeeeeccc-----CCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCc
Q 035933 84 NRAVDREK-NICRVLARD-----ENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDV 155 (405)
Q Consensus 84 ~~~~~~~~-~~~~~~~~~-----~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~ 155 (405)
...+.... .....+... .....+.++|..|.+.|.+.+. .|+ ++++++|.++..+ ++..+.|++.+ +|+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~-~g~~~~V~~~~--~G~ 171 (591)
T 3i3l_A 95 TFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLS-DPDRVVLTVRR--GGE 171 (591)
T ss_dssp EEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECC-STTCEEEEEEE--TTE
T ss_pred EEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEc-CCCEEEEEEec--CCc
Confidence 11121111 011111111 1122456899999999999884 688 9999999999853 34456666322 665
Q ss_pred eeEEeeeEEEeecCCcccccccccCCCCCC-cCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEE
Q 035933 156 IIDVVGDLLVAADGSRSSVRQTFLPDSKLR-YTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLY 234 (405)
Q Consensus 156 ~~~~~~d~vV~AdG~~S~vr~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (405)
..+++||+||+|||.+|.+|+.+....... +.... ....+....... .......+....++++++.+
T Consensus 172 ~~~i~AdlVV~AdG~~S~lr~~lg~~~~~~~~~~~a-v~~~~~~~~~~~-----------~~~~~~~~~~~~~~G~~w~i 239 (591)
T 3i3l_A 172 SVTVESDFVIDAGGSGGPISRKLGVRQYDEFYRNFA-VWSYFKLKDPFE-----------GDLKGTTYSITFEDGWVWMI 239 (591)
T ss_dssp EEEEEESEEEECCGGGCHHHHHHTCEEEEEEEEEEE-EEEEEECCCSCC-----------STTTTCEEEEEETTEEEEEE
T ss_pred eEEEEcCEEEECCCCcchhHHHcCCCCCCccccceE-EEEEEecCcccc-----------CCCCCceEEEEcCCcEEEEE
Confidence 456999999999999999999875332211 12222 222222111100 01122334555678899999
Q ss_pred EeeCcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCc---cceeeecccCC
Q 035933 235 ELMYKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKE---PFLNLIADCDP 311 (405)
Q Consensus 235 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 311 (405)
|..++..++.|........ .......+++.+++.. +.+.+.+.+..... ....... ..+
T Consensus 240 Pl~~~~~sv~~~~~~~~~~----------------~l~~~~~~~~~~~l~~-~~p~l~~~l~~~~~~~~~~~~~~~-~~~ 301 (591)
T 3i3l_A 240 PIKDDLYSVGLVVDRSKSA----------------EVREQGADAFYSSTLA-KCAKAMDILGGAEQVDEVRIVQDW-SYD 301 (591)
T ss_dssp ECSSSEEEEEEEEEGGGHH----------------HHHHHCHHHHHHHHHT-TCHHHHHHHTTCEECSCCEEEEEE-EEE
T ss_pred ECCCCeEEEEEEcCHHHHh----------------hhccCCHHHHHHHHHH-hCHHHHHHHhcCccccCceEeccc-ccc
Confidence 9998887887776654332 0001112333334333 35555555543211 1111111 112
Q ss_pred CCcCccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhh--CCCcHHHHHHHHHhhcccchHHHHHHHHHhh
Q 035933 312 LTQIYWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERW--GPENLHSALEEHKSVRLPVTNKQVLHSRRVG 386 (405)
Q Consensus 312 ~~~~~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~--~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~ 386 (405)
...+..+|+++||||||+++|+.|||+++|++||..|+++|... .++....+++.|++.|+++...+........
T Consensus 302 ~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 302 TEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp ESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccCCEEEEccccccCCCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566799999999999999999999999999999999999875 2345677899999999999999888888766
No 21
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=5.9e-34 Score=269.99 Aligned_cols=335 Identities=11% Similarity=0.029 Sum_probs=208.4
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
++++||+||||||||+++|+.|+++|++|+|+||.+.++ .+.|..+++.+...++++++.. .+...+.+......
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~----~~~g~~~~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~ 77 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPR----FVIGESLLPRCMEHLDEAGFLD-AVKAQGFQQKFGAK 77 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSC----CCSCCBCCGGGHHHHHHTTCHH-HHHHTTCEEECEEE
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCC----CcccCcccHhHHHHHHHcCChH-HHHHcCCcccCCcE
Confidence 345899999999999999999999999999999998764 2456778899999999998743 34443332211111
Q ss_pred ceecCccceeeeec---ccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEE
Q 035933 85 RAVDREKNICRVLA---RDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDV 159 (405)
Q Consensus 85 ~~~~~~~~~~~~~~---~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~ 159 (405)
..+.... ....+. .......+.++|..+.+.|.+.+. .|+ ++++++|++++.++++..+.+. ..+|+..++
T Consensus 78 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~---~~~g~~~~~ 153 (421)
T 3nix_A 78 FVRGKEI-ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIE---DINGNKREI 153 (421)
T ss_dssp EEETTEE-EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEE---ETTSCEEEE
T ss_pred EEeCCee-EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEE---cCCCCEEEE
Confidence 1111111 100111 011223467999999999999884 488 9999999999865443334444 567876569
Q ss_pred eeeEEEeecCCcccccccccCCCCCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeE-eecCCeEEEEEEeeC
Q 035933 160 VGDLLVAADGSRSSVRQTFLPDSKLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHT-DLVPGTHTVLYELMY 238 (405)
Q Consensus 160 ~~d~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~ 238 (405)
+||+||+|||.+|.+|+.+.............+...+....... .++......++ ...++++.+.+|.++
T Consensus 154 ~a~~vV~A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~~~~~P~~~ 224 (421)
T 3nix_A 154 EARFIIDASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPV---------AAEMEGNRITAVVHKPKVWIWVIPFSN 224 (421)
T ss_dssp EEEEEEECCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC-------------CCSEEEEEEEETTEEEEEEECTT
T ss_pred EcCEEEECCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCC---------ccCCCCeEEEEEeCCCCEEEEEEEECC
Confidence 99999999999999998875443333232233333332211100 01111111121 234677889999999
Q ss_pred cceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceee--ecccCCCCcCc
Q 035933 239 KRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNL--IADCDPLTQIY 316 (405)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 316 (405)
+...+.+....+... ....+ .++++.++.. +.+.+.+.+.......... .....+..++.
T Consensus 225 ~~~~vg~~~~~~~~~--------------~~~~~---~~~~l~~~~~-~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 286 (421)
T 3nix_A 225 GNTSVGFVGEPSYFD--------------EYTGT---PEERMRAMIA-NEGHIAERFKSEEFLFEPRTIEGYAISASKLY 286 (421)
T ss_dssp SEEEEEEEECHHHHT--------------TSCSC---HHHHHHHHHH-TCTTTHHHHTTCCBSSCCEEEECCCBEESCSE
T ss_pred CCEEEEEEecHHHhh--------------hcCCC---HHHHHHHHHH-hCcHHHHHHhcCccccCceeecccceeeeeec
Confidence 888888876554322 00001 1222333333 3455555555543221111 11122344566
Q ss_pred cccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccch
Q 035933 317 WDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVT 375 (405)
Q Consensus 317 ~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~ 375 (405)
.+++++||||||+++|+.|+|+++|++||..|++.|.+.......+.+..|++.++...
T Consensus 287 ~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~la~~l~~~~~~~~~~~~~~y~~~~~~~~ 345 (421)
T 3nix_A 287 GDGFVLTGNATEFLDPIFSSGATFAMESGSKGGKLAVQFLKGEEVNWEKDFVEHMMQGI 345 (421)
T ss_dssp ETTEEECGGGTCBCCSTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHTHHHHHHHH
T ss_pred cCCEEEecccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 69999999999999999999999999999999999987632222234556666665433
No 22
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=100.00 E-value=3.1e-35 Score=274.72 Aligned_cols=323 Identities=15% Similarity=0.074 Sum_probs=198.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhh-hhcccCCcccccc
Q 035933 8 PKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDL-LHNITLPLTIDQN 84 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ 84 (405)
+||+||||||||+++|+.|+++ |++|+||||.+.++ ..|+++.+++++.+.+...+...+. +.....+. ...
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 75 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQE---VLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFL--EDF 75 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTC---CCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEE--CCE
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCC---cceeEEEeCcHHHHhhcCcchhhhhhHHHhhccc--cce
Confidence 4899999999999999999999 99999999998764 3577888888766511111110000 11111110 011
Q ss_pred ceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeee
Q 035933 85 RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d 162 (405)
.+..... ......+.++..++|..|.+.|.+.+. .|+ ++++++|++++ .. +. +++|
T Consensus 76 ~~~~~g~----~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~--~~--------------~~--~~ad 133 (381)
T 3c4a_A 76 KLVHHNE----PSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHG--EL--------------PL--ADYD 133 (381)
T ss_dssp EEEESSS----EEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGG--GC--------------CG--GGCS
T ss_pred EEEeCCe----eEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccch--hc--------------cc--ccCC
Confidence 1111111 011111334567999999999999885 477 99999998764 11 11 5799
Q ss_pred EEEeecCCcccccccccCCCCCCc---CceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEE--EEEEee
Q 035933 163 LLVAADGSRSSVRQTFLPDSKLRY---TGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHT--VLYELM 237 (405)
Q Consensus 163 ~vV~AdG~~S~vr~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~p~~ 237 (405)
+||+|||.+|. |+.+........ .+...|.+...... .....+...+.+.. ..+|++
T Consensus 134 ~vV~AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~g~~~~~~~p~~ 195 (381)
T 3c4a_A 134 LVVLANGVNHK-TAHFTEALVPQVDYGRNKYIWYGTSQLFD-----------------QMNLVFRTHGKDIFIAHAYKYS 195 (381)
T ss_dssp EEEECCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEESSCCS-----------------SEEEEEEEETTEEEEEEEEECS
T ss_pred EEEECCCCCch-HHhhhhhcCCCcccCCccEEEEecCCCCC-----------------cceeeEeeCCCcEEEEEEEEec
Confidence 99999999999 998742212222 33445555432210 00111222233433 358887
Q ss_pred CcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecccCCCCcCcc
Q 035933 238 YKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIADCDPLTQIYW 317 (405)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (405)
++...+ +....+... ....+ ...+.+...+.+.+.+..|.+.. +++... ...+.++...+.++|..
T Consensus 196 ~~~~~~-~~~~~~~~~---------~~~~~-~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~--~~~~~~~~~~~~~~~~~ 261 (381)
T 3c4a_A 196 DTMSTF-IVECSEETY---------ARARL-GEMSEEASAEYVAKVFQAELGGH-GLVSQP--GLGWRNFMTLSHDRCHD 261 (381)
T ss_dssp SSCEEE-EEEECHHHH---------HHTTS-SSSCHHHHHHHHHHHTHHHHTTC-CCBCCT--TTCSEEEEECCCSCSEE
T ss_pred CCeEEE-EEECCcccc---------ccCCc-ccCChHHHHHHHHHHhcccCCCc-hhhcCC--CcceeeeccccCCCccc
Confidence 766433 332221110 00001 01122222222222223232211 111111 12445555567788888
Q ss_pred ccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccchHHHHHHHHHhhhhhcC
Q 035933 318 DNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVTNKQVLHSRRVGLIKLG 391 (405)
Q Consensus 318 ~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~~~~ 391 (405)
+|++|||||||.++|+.|||+|+||+||..|+++|... .+..++|+.|+++|++++..++..++.+.+.+..
T Consensus 262 grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~~--~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~~ 333 (381)
T 3c4a_A 262 GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCTE--DGVPAALKRFEERALPLVQLFRGHADNSRVWFET 333 (381)
T ss_dssp TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHHS--SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhcc--ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 99999999999999999999999999999999999875 4678999999999999999999999999855543
No 23
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=100.00 E-value=1.3e-31 Score=262.02 Aligned_cols=343 Identities=15% Similarity=0.170 Sum_probs=205.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc------CCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcc
Q 035933 7 KPKAIIVGGSIAGISCAKALILA------GWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLT 80 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~------g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (405)
++||+||||||||+++|+.|++. |++|+||||.+.+... ...+..+.+++++.| + . .+...+.+..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~--~~~g~~l~~~~l~~l--l---~-~~~~~g~~~~ 106 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAH--TLSGACLDPRAFEEL--F---P-DWKEKGAPLN 106 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTT--CCCCCEECTHHHHHH--C---T-THHHHTCCCC
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCc--cccccccCHHHHHHH--H---H-HHHhcCCcee
Confidence 58999999999999999999999 9999999999876432 233455777766544 1 1 1222222211
Q ss_pred c----cccceecCccceeee-ecc--cCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeec
Q 035933 81 I----DQNRAVDREKNICRV-LAR--DENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNL 151 (405)
Q Consensus 81 ~----~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~ 151 (405)
. ....+.......... ... -.....+.++|..|.+.|.+.++ .|+ ++++++|.++..++++..+.|.+.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~ 186 (584)
T 2gmh_A 107 TPVTEDRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDV 186 (584)
T ss_dssp EECCEEEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCE
T ss_pred eeechhheeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCc
Confidence 0 001111111100000 000 11223467899999999999884 588 99999999998654433333553210
Q ss_pred ---CCCce-------eEEeeeEEEeecCCccccccccc----CCCC--CCcCceEEEEEEecCCCCCCchhhhhhhhccC
Q 035933 152 ---RTDVI-------IDVVGDLLVAADGSRSSVRQTFL----PDSK--LRYTGYCAWRGVFDFSENENSETIQGIRKAYP 215 (405)
Q Consensus 152 ---~~g~~-------~~~~~d~vV~AdG~~S~vr~~l~----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (405)
.+|+. .+++||+||+|||.+|.+|+.+. .... +...+. .+..+...+..... +
T Consensus 187 g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~-g~~~~~~v~~~~~~----------~ 255 (584)
T 2gmh_A 187 GIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGI-GLKELWVIDEKKWK----------P 255 (584)
T ss_dssp EECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEE-EEEEEEECCGGGCC----------T
T ss_pred cccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHh-hhhhheecCccccc----------C
Confidence 24432 35899999999999999998862 2211 112222 22223222211000 0
Q ss_pred CCCCceeEee------cCCeEEEEEEee--CcceeEEEEEecccccccccccccccCCccccccCHHHHHHHHHHHHhhc
Q 035933 216 ELGNGVHTDL------VPGTHTVLYELM--YKRLNWIWYITQPELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKIC 287 (405)
Q Consensus 216 ~~~~~~~~~~------~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (405)
+. ....+ ...+..+++|.. ++..+++|....+... . ..+ ..+.+ +++..
T Consensus 256 --~~-~~~~~g~~~~~~~~gg~~~~~~~~~~~~~~vg~~~~~~~~~--------------~-~~~--~~~~l-~~~~~-- 312 (584)
T 2gmh_A 256 --GR-VDHTVGWPLDRHTYGGSFLYHLNEGEPLLALGFVVGLDYQN--------------P-YLS--PFREF-QRWKH-- 312 (584)
T ss_dssp --TE-EEEEEETTSCTTSCEEEEEEECCSSSCEEEEEEEEETTCCC--------------T-TCC--HHHHH-HHHTT--
T ss_pred --Ce-EEEEEeccccCCcCCceEEEEecCCCCeEEEEEEEecCccc--------------c-cCC--hHHHH-HHHHh--
Confidence 00 01111 112345677887 6777877776654322 0 011 11222 22111
Q ss_pred ChHHHHHHHhcCcc-ce-eeec--ccCCCCcCccccEEEEccccccCCCCCchhhhhHHHHHHHHHHHHHhhC--CC-cH
Q 035933 288 APEHATVIKETKEP-FL-NLIA--DCDPLTQIYWDNVVLIGDAAHPITPHCARSTNMAIADAAVLGKCLERWG--PE-NL 360 (405)
Q Consensus 288 ~~~~~~~~~~~~~~-~~-~~~~--~~~~~~~~~~~~v~lvGDAah~~~P~~G~G~~~al~da~~la~~l~~~~--~~-~~ 360 (405)
.+.+.+++...... +. ..+. ...+.+.+..+|++|||||||+++|+.|||+|+||+||..||+.|.... ++ ..
T Consensus 313 ~p~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~ 392 (584)
T 2gmh_A 313 HPSIKPTLEGGKRIAYGARALNEGGFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQS 392 (584)
T ss_dssp STTTHHHHTTCEEEEEEEEEEECCGGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCC
T ss_pred ChHHHHHhCCCeEEEecceEccCCCcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcch
Confidence 35566665432211 11 0111 1234567778999999999999999999999999999999999998763 21 23
Q ss_pred HHH---HHHHHhhcccc-hHHHHHHHHHhhhhhcC
Q 035933 361 HSA---LEEHKSVRLPV-TNKQVLHSRRVGLIKLG 391 (405)
Q Consensus 361 ~~~---l~~y~~~r~~~-~~~~~~~s~~~~~~~~~ 391 (405)
.++ |..|+++|+++ +.+.+..++.+..+++.
T Consensus 393 ~~a~~~L~~Ye~~r~~~~v~~~l~~~r~~~~~~~~ 427 (584)
T 2gmh_A 393 KTIGLHVTEYEDNLKNSWVWKELYSVRNIRPSCHG 427 (584)
T ss_dssp SSSSCCCTHHHHHHHTSHHHHHHHHTTTTTGGGGS
T ss_pred hhhhhhHHHHHHHHHHhHHHHHHHHHhChhHHHHH
Confidence 454 89999999998 78888899888887753
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=100.00 E-value=6.3e-31 Score=255.36 Aligned_cols=332 Identities=12% Similarity=0.038 Sum_probs=195.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHH------------cCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhh-h
Q 035933 6 RKPKAIIVGGSIAGISCAKALIL------------AGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDL-L 72 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~------------~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~ 72 (405)
..+||+||||||||+++|+.|++ .|++|+|||+.+.+. .+.|..+.+.+...|+.+|+.+.. +
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~----~g~g~~~~p~~~~~l~~lGi~e~~~~ 81 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVAT----IGVGEGTWPSMRSTLSKIGIDENDFI 81 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCC----CCSCEECCTHHHHHHHHHTCCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCC----cceeeechHhHHHHHHHcCCCHHHHH
Confidence 46899999999999999999999 899999999976643 344788899999999999986532 3
Q ss_pred hcccCCcccc-ccceec---------------C------ccceeeeec------------------------------c-
Q 035933 73 HNITLPLTID-QNRAVD---------------R------EKNICRVLA------------------------------R- 99 (405)
Q Consensus 73 ~~~~~~~~~~-~~~~~~---------------~------~~~~~~~~~------------------------------~- 99 (405)
.......... .+..|. + ...+...+. .
T Consensus 82 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~ 161 (526)
T 2pyx_A 82 RQCDASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQ 161 (526)
T ss_dssp HHTTCEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCT
T ss_pred HHcCCEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccc
Confidence 3322211000 000000 0 000000000 0
Q ss_pred --cCCcccccccHHHHHHHHHhcCC--Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcccc
Q 035933 100 --DENFNYLQAHWTDLHGLIYNTLP--VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSSV 174 (405)
Q Consensus 100 --~~~~~~~~~~r~~l~~~L~~~~~--~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~v 174 (405)
......+.++|..|.+.|.+.+. .|+ ++++ +|++++.++++..+.|+ +.+|.. +++|+||+|||.+|.+
T Consensus 162 ~~~~~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~---~~~g~~--i~ad~vV~AdG~~S~~ 235 (526)
T 2pyx_A 162 YHFQNNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLI---TKQNGE--ISGQLFIDCTGAKSLL 235 (526)
T ss_dssp TCCSSCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEE---ESSSCE--EECSEEEECSGGGCCC
T ss_pred cCCCCCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEE---ECCCCE--EEcCEEEECCCcchHH
Confidence 00112356899999999999884 588 8888 69999864444334555 456664 8999999999999999
Q ss_pred -cccccCCCC--CC-cCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCcceeEEEEEecc
Q 035933 175 -RQTFLPDSK--LR-YTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYKRLNWIWYITQP 250 (405)
Q Consensus 175 -r~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 250 (405)
++.+..... .. ......+.......... +...........+.++.+.+|+.++. ...+.....
T Consensus 236 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~g~~~~~pl~~~~-~~~~v~~~~ 302 (526)
T 2pyx_A 236 LGEHLQVPFLSQKSVLFNDRALAIQVPYSDAN------------SPIASCTHSTAQPNGWIWDIGLPTRK-GVGYVYSSS 302 (526)
T ss_dssp CCCCTCCCEEECHHHHCCCEEEEEEEECSSTT------------CCCCSSEEEEEETTEEEEEEECSSEE-EEEEEECTT
T ss_pred HHHHhCCCcccccccccCccEEEEEeeccCCC------------CCCCCceeEEecCCCeEEEeeCCCce-EEEEEecCC
Confidence 554432210 00 11111111112221100 00001111223456677888887642 222222211
Q ss_pred cccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecccCCCCcCccccEEEEccccccC
Q 035933 251 ELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIADCDPLTQIYWDNVVLIGDAAHPI 330 (405)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAah~~ 330 (405)
.. +++...+.+.+....+.+.+ ..... ..+... ....+++..+|++|||||||++
T Consensus 303 ~~-------------------~~~~~~~~l~~~l~~~~~~l----~~~~~-~~~~~~-~~~~~~~~~grv~LiGDAAh~~ 357 (526)
T 2pyx_A 303 HT-------------------NDIDAQKTLFNYLGVDGAAA----DKLEP-RQLAIN-PGYRAKCWQNNCIAIGMAAGFI 357 (526)
T ss_dssp TC-------------------CHHHHHHHHHHHHTCCHHHH----HHCCC-EEEECC-CEEESCSEETTEEECGGGTEEC
T ss_pred CC-------------------ChHHHHHHHHHHHHhcCccc----ccCCc-eEEecc-cCccccccCCCEEEEEhhhccc
Confidence 00 11122222222222222222 21211 111111 1123455569999999999999
Q ss_pred CCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccchHHHHHHHHHhh
Q 035933 331 TPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVTNKQVLHSRRVG 386 (405)
Q Consensus 331 ~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~ 386 (405)
+|+.|||+|+|++||..|+++|.... .....+++.|+++|++++.++.+......
T Consensus 358 ~P~~GqGi~~ai~da~~La~~L~~~~-~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y 412 (526)
T 2pyx_A 358 EPLEASALALIEWTASTLAQQLPPNR-MVMDTISARVNERYQQHWQQIIDFLKLHY 412 (526)
T ss_dssp CCTTCHHHHHHHHHHHHHHHTCCSCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHHHHHhhhcC-CcCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987421 34578899999999999888766444433
No 25
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.97 E-value=4.9e-29 Score=242.84 Aligned_cols=326 Identities=10% Similarity=0.030 Sum_probs=191.6
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHH---cCCcEEEEccCCCCCCCCCCCcceeeCccHHH-HHHHhccChhh-hhcccCCc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALIL---AGWDVVVIEKTRGPPTGNPTGAGIALHLLSQK-IVKSWLHQPDL-LHNITLPL 79 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~---~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~~~~~-~~~~~~~~ 79 (405)
++.+||+|||||++|+++|+.|++ .|++|+|||+...+. .+.|..+.+.+.. .++.+|+.... +.......
T Consensus 3 ~~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~----~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~ 78 (538)
T 2aqj_A 3 KPIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPR----IGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAF 78 (538)
T ss_dssp CBCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCC----CCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEE
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCC----cCCCcccchhHHHHHHHHhCCCHHHHHHhcCchh
Confidence 345899999999999999999999 999999999976543 3446778888888 89998875432 33222111
Q ss_pred ccc-ccceecCc------cceeee----------------ecc-----c---------------------------CCcc
Q 035933 80 TID-QNRAVDRE------KNICRV----------------LAR-----D---------------------------ENFN 104 (405)
Q Consensus 80 ~~~-~~~~~~~~------~~~~~~----------------~~~-----~---------------------------~~~~ 104 (405)
... .+..|... ...... +.. . ....
T Consensus 79 ~~g~~~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 158 (538)
T 2aqj_A 79 KAAIKFVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSH 158 (538)
T ss_dssp ECEEEEESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCC
T ss_pred hCCccccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCc
Confidence 100 00000000 000000 000 0 0112
Q ss_pred cccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcccccccccCCC
Q 035933 105 YLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSSVRQTFLPDS 182 (405)
Q Consensus 105 ~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~vr~~l~~~~ 182 (405)
.+.++|..|.+.|.+.+. .|+ ++++ +|+++..++++..+.|+ +++|+. +++|+||+|||.+|.+|+.+....
T Consensus 159 ~~~i~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~---~~~g~~--i~ad~vV~A~G~~s~~~~~~lg~~ 232 (538)
T 2aqj_A 159 AWHFDAHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLL---TKEGRT--LEADLFIDCSGMRGLLINQALKEP 232 (538)
T ss_dssp EEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEE---ETTSCE--ECCSEEEECCGGGCCCCCCCTCCC
T ss_pred cEEEeHHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEE---ECCCcE--EEeCEEEECCCCchhhHHHHhCCC
Confidence 356899999999999874 578 8888 89999864444345555 556754 899999999999999966553211
Q ss_pred CCCc----CceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCcceeEEEEEecccccccccc
Q 035933 183 KLRY----TGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYKRLNWIWYITQPELACFILP 258 (405)
Q Consensus 183 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 258 (405)
...+ .....+...+.... . .. ...........+.++.+.+|..++ ..+.+..... .
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~-----~----~~---~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~~~~--~----- 292 (538)
T 2aqj_A 233 FIDMSDYLLCDSAVASAVPNDD-----A----RD---GVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVFSSH--F----- 292 (538)
T ss_dssp EEECTTTCCCCEEEEEEEECCH-----H----HH---CCCSSEEEEECSSEEEEEEEETTE-EEEEEEECTT--T-----
T ss_pred ccccccccccceEEEEecccCC-----c----cc---CCCCceeeeecCCceEEEecCCCc-eEEEEEEcCC--C-----
Confidence 1111 11111111111110 0 00 000111222456678888888764 3333322211 0
Q ss_pred cccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecccCCCCcCccccEEEEccccccCCCCCchhh
Q 035933 259 FICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIADCDPLTQIYWDNVVLIGDAAHPITPHCARST 338 (405)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAah~~~P~~G~G~ 338 (405)
..+.+..+.+.+. ... .+ + .... ..... ....+.+..+|++|||||||+++|+.|||+
T Consensus 293 -----------~~~~~~~~~l~~~-~~~-~~-~-----~~~~--~~~~~-~~~~~~~~~grvvliGDAAh~~~P~~gqG~ 350 (538)
T 2aqj_A 293 -----------TSRDQATADFLKL-WGL-SD-N-----QPLN--QIKFR-VGRNKRAWVNNCVSIGLSSCFLEPLESTGI 350 (538)
T ss_dssp -----------SCHHHHHHHHHHH-HTC-CT-T-----CCCE--EEECC-CEEESCSEETTEEECGGGTEECCGGGSCHH
T ss_pred -----------CChHHHHHHHHHH-hcC-CC-C-----CCce--EEeec-cccccccccCCEEEEcccccccCcchhccH
Confidence 0111222222222 111 11 1 1111 11111 112344566999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccchHHHHHHHHH
Q 035933 339 NMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVTNKQVLHSRR 384 (405)
Q Consensus 339 ~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~ 384 (405)
++|++||..|+++|... .....+|+.|+++|++++.++......
T Consensus 351 ~~a~~da~~La~~L~~~--~~~~~~l~~Y~~~~~~~~~~~~~~~~~ 394 (538)
T 2aqj_A 351 YFIYAALYQLVKHFPDT--SFDPRLSDAFNAEIVHMFDDCRDFVQA 394 (538)
T ss_dssp HHHHHHHHHHHHTCCBT--TCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998742 456789999999999888776554333
No 26
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.97 E-value=4.2e-29 Score=242.19 Aligned_cols=325 Identities=11% Similarity=-0.005 Sum_probs=190.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---cCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhh-hhcccCCcccc-
Q 035933 8 PKAIIVGGSIAGISCAKALIL---AGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDL-LHNITLPLTID- 82 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~---~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~- 82 (405)
+||+|||||+||+++|+.|++ .|++|+|||+.+.+. .+.+..+.+.....++.+|+.... +..........
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~----~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~ 78 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRR----IGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGI 78 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-----------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCc----eeeccccCcchHHHHHHcCCCHHHHHHHcCCeEeccc
Confidence 699999999999999999999 999999999986542 355777888899999999885532 33322111000
Q ss_pred ccceec----------C------ccce-----------------------------------eeee----c---------
Q 035933 83 QNRAVD----------R------EKNI-----------------------------------CRVL----A--------- 98 (405)
Q Consensus 83 ~~~~~~----------~------~~~~-----------------------------------~~~~----~--------- 98 (405)
.+..|. + .... ...+ .
T Consensus 79 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 158 (511)
T 2weu_A 79 RFENWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLA 158 (511)
T ss_dssp EEESSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGG
T ss_pred eecCCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccc
Confidence 000000 0 0000 0000 0
Q ss_pred ccC--CcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcccc
Q 035933 99 RDE--NFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSSV 174 (405)
Q Consensus 99 ~~~--~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~v 174 (405)
... ....+.++|..|.+.|.+.+. .|+ ++++ +|++++.++++..+.|+ +.+|++ +++|+||+|||.+|.+
T Consensus 159 ~~~~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~---~~~g~~--~~ad~vV~A~G~~S~~ 232 (511)
T 2weu_A 159 EQRAQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVH---TKQHGE--ISGDLFVDCTGFRGLL 232 (511)
T ss_dssp GCCSCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEE---ESSSCE--EECSEEEECCGGGCCC
T ss_pred cCcCCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEE---ECCCCE--EEcCEEEECCCcchHH
Confidence 000 122356899999999999874 578 8889 99999864444335555 557764 8999999999999999
Q ss_pred cccccC-CC----CCCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCcceeEEEEEec
Q 035933 175 RQTFLP-DS----KLRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYKRLNWIWYITQ 249 (405)
Q Consensus 175 r~~l~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 249 (405)
++.+.. .. ....... .+...+..+.. . ...........++++.+.+|..+ ...+.+....
T Consensus 233 ~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~---~----------~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~~ 297 (511)
T 2weu_A 233 INQTLGGRFQSFSDVLPNNR-AVALRVPREND---E----------DMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYSD 297 (511)
T ss_dssp CCCCTCCCEEECTTTCCCCE-EEEEEEECSSG---G----------GCCSSEEEEEETTEEEEEEECSS-EEEEEEEECT
T ss_pred HHHHhCCCCccccccCcccc-eEEEEeccCCC---C----------CCCcceeceecCCCcEEEEECCC-ceEEEEEECC
Confidence 655432 11 0111111 11111121110 0 00111123345667888888876 3333332221
Q ss_pred ccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecccCCCCcCccccEEEEcccccc
Q 035933 250 PELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIADCDPLTQIYWDNVVLIGDAAHP 329 (405)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAah~ 329 (405)
. . ..+.+..+.+.+.+ .+.+.+ .....+ ... ....+.+..+|+++||||||+
T Consensus 298 ~--~----------------~~~~~~~~~l~~~~--~~~~~~-----~~~~~~--~~~-~~~~~~~~~~rv~liGDAAh~ 349 (511)
T 2weu_A 298 E--F----------------ISPEEAERELRSTV--APGRDD-----LEANHI--QMR-IGRNERTWINNCVAVGLSAAF 349 (511)
T ss_dssp T--T----------------SCHHHHHHHHHHHH--CTTCTT-----SCCEEE--ECC-CEEESCSEETTEEECGGGTEE
T ss_pred C--C----------------CCHHHHHHHHHHHh--Cccccc-----ccceeE--Eee-ccccccccCCCEEEEechhhc
Confidence 1 1 01122222222221 111111 011111 111 112234456999999999999
Q ss_pred CCCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccchHHHHHHHHHhhh
Q 035933 330 ITPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVTNKQVLHSRRVGL 387 (405)
Q Consensus 330 ~~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~ 387 (405)
++|+.|+|+++|++||..|+++|... .....+|+.|+++|++++.++.........
T Consensus 350 ~~P~~g~G~~~a~~da~~La~~l~~~--~~~~~~l~~Y~~~~~~~~~~~~~~~~~~y~ 405 (511)
T 2weu_A 350 VEPLESTGIFFIQHAIEQLVKHFPGE--RWDPVLISAYNERMAHMVDGVKEFLVLHYK 405 (511)
T ss_dssp CCGGGCCHHHHHHHHHHHHHHTCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccccccHHHHHHHHHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999742 456789999999999988877765544443
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.97 E-value=1.5e-28 Score=239.66 Aligned_cols=330 Identities=12% Similarity=0.022 Sum_probs=193.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHH---cCCcEEEEccCCCCCCCCCCCcceeeCccHHH-HHHHhccChhh-hhcccCCcc
Q 035933 6 RKPKAIIVGGSIAGISCAKALIL---AGWDVVVIEKTRGPPTGNPTGAGIALHLLSQK-IVKSWLHQPDL-LHNITLPLT 80 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~---~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~~~~~-~~~~~~~~~ 80 (405)
+.+||+||||||||+++|+.|++ .|++|+|||+.+.+. .+.|..+.+.+.. +++.+++.... +........
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~----~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~ 99 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPT----LGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYK 99 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCC----CCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCc----cceeeeechhHHHHHHHHhCCChHHHHHhcCCeEE
Confidence 46899999999999999999999 999999999976543 3456788898999 99999886532 332221110
Q ss_pred cc-ccceecCc-------------c-ceeeeec-----------------------c-----------------------
Q 035933 81 ID-QNRAVDRE-------------K-NICRVLA-----------------------R----------------------- 99 (405)
Q Consensus 81 ~~-~~~~~~~~-------------~-~~~~~~~-----------------------~----------------------- 99 (405)
.. ....|... . .....+. .
T Consensus 100 ~g~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (550)
T 2e4g_A 100 VAIKFINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRL 179 (550)
T ss_dssp CEEEEESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCT
T ss_pred EeeeEeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhh
Confidence 00 00011100 0 0000000 0
Q ss_pred c---CCcccccccHHHHHHHHHhcCC-C-ce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCccc
Q 035933 100 D---ENFNYLQAHWTDLHGLIYNTLP-V-EI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSS 173 (405)
Q Consensus 100 ~---~~~~~~~~~r~~l~~~L~~~~~-~-~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~ 173 (405)
. .....+.++|..+.+.|.+.+. . |+ ++++ +|+++..++++..+.|+ +.+|+. +++|+||+|||.+|.
T Consensus 180 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~---~~~G~~--i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 180 DGSKVTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVR---TATGRV--FDADLFVDCSGFRGL 253 (550)
T ss_dssp TSCBCSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEE---ETTSCE--EECSEEEECCGGGCC
T ss_pred cCCCCCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEE---ECCCCE--EECCEEEECCCCchh
Confidence 0 0112355899999999999884 4 88 8899 99999864444335555 556754 899999999999999
Q ss_pred ccccccCCCCCCc----CceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCcceeEEEEEec
Q 035933 174 VRQTFLPDSKLRY----TGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYKRLNWIWYITQ 249 (405)
Q Consensus 174 vr~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 249 (405)
+++.........+ .....+........ . .... .........++++.+.+|.++. ..+.+....
T Consensus 254 ~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~----~-----~~~~---~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~~~ 320 (550)
T 2e4g_A 254 LINKAMEEPFLDMSDHLLNDSAVATQVPHDD----D-----ANGV---EPFTSAIAMKSGWTWKIPMLGR-FGTGYVYSS 320 (550)
T ss_dssp CCCCCTCCCEEECTTTCCCCEEEEEEEECCH----H-----HHCC---CSSEEEEECSSEEEEEEECSSE-EEEEEEECT
T ss_pred hHHHHhCCCcccccccccccceEEEeecccC----C-----cccC---CCceeeeecCCceEEEccCCCc-cceEEEEec
Confidence 9544322110000 10011111111110 0 0000 0111122335667778887663 222222211
Q ss_pred ccccccccccccccCCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceeeecccCCCCcCccccEEEEcccccc
Q 035933 250 PELACFILPFICIRGGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNLIADCDPLTQIYWDNVVLIGDAAHP 329 (405)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAah~ 329 (405)
. ..+++...+.+.+.... .+.+ .....+ .......+.+..+|+++||||||+
T Consensus 321 ---~----------------~~~~~~~~~~l~~~~~~-~p~l-----~~~~~i---~~~~~~~~~~~~~rvvliGDAAh~ 372 (550)
T 2e4g_A 321 ---R----------------FATEDEAVREFCEMWHL-DPET-----QPLNRI---RFRVGRNRRAWVGNCVSIGTSSCF 372 (550)
T ss_dssp ---T----------------TSCHHHHHHHHHHHTTC-CTTT-----SCCEEE---ECCCEEESCSEETTEEECSTTTEE
T ss_pred ---C----------------CCChHHHHHHHHHhhCc-Cccc-----CCCceE---EecCCCccccccCCEEEEehhhcc
Confidence 1 01122222211211111 1111 111111 111112234456899999999999
Q ss_pred CCCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcccchHHHHHHHHHhhhh
Q 035933 330 ITPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRLPVTNKQVLHSRRVGLI 388 (405)
Q Consensus 330 ~~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~~~~~~~~~~s~~~~~~ 388 (405)
++|+.|||+++|++||..|+++|... .....+|+.|+++|++++..+.+.......+
T Consensus 373 ~~P~~GqGi~~a~~da~~La~~L~~~--~~~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~ 429 (550)
T 2e4g_A 373 VEPLESTGIYFVYAALYQLVKHFPDK--SLNPVLTARFNREIETMFDDTRDFIQAHFYF 429 (550)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHTCCCT--TCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCccchhhHHHHHHHHHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998742 4567899999999999998877766655544
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.96 E-value=3e-28 Score=230.60 Aligned_cols=327 Identities=11% Similarity=-0.023 Sum_probs=183.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCC-CCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTG-NPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~-~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
++||+||||||+|+++|+.|+++|++|+||||++.+... +....+..+...+...+..+++.. +.....+.......
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~--~~~~~~~~~~~~~~ 99 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNE--WPSEEFGYFGHYYY 99 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCC--SCHHHHCEEEEEEE
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhh--hhhhcccccceeEE
Confidence 479999999999999999999999999999998743221 111112334455666667765422 11111111110111
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeE
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 163 (405)
..+... . .+......+...+++..+...|.+.+. .|+ +++.. + . ..+.+.....+|+
T Consensus 100 ~~~~~~-~--~~~~~~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~-v------------~-----~~~l~~~~~~ad~ 158 (430)
T 3ihm_A 100 VGGPQP-M--RFYGDLKAPSRAVDYRLYQPMLMRALEARGGKFCYDA-V------------S-----AEDLEGLSEQYDL 158 (430)
T ss_dssp ECSSSC-E--EEEEEEEEEEBEECHHHHHHHHHHHHHHTTCEEEECC-C------------C-----GGGHHHHHTTSSE
T ss_pred ECCCCc-c--ccchhcCCcceeecHHHHHHHHHHHHHHcCCEEEEEe-c------------c-----hhhhhhhcccCCE
Confidence 111110 0 111111233466888889899888774 465 54421 1 0 0011111136899
Q ss_pred EEeecCCcccccccccCCCCC--CcC----ceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEee
Q 035933 164 LVAADGSRSSVRQTFLPDSKL--RYT----GYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELM 237 (405)
Q Consensus 164 vV~AdG~~S~vr~~l~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 237 (405)
||+|||.+|.++......... .+. ....+.++.. +. .....+....+.+.++.+|..
T Consensus 159 VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~-~~----------------~~~~~~~~~~~~G~~~~~p~~ 221 (430)
T 3ihm_A 159 LVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKE-AP----------------IRAVTMSFSPGHGELIEIPTL 221 (430)
T ss_dssp EEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCC-CS----------------SCCEEEEEETTTEEEEEEEEE
T ss_pred EEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCC-CC----------------cCeeeeeecCCCcceEEeccc
Confidence 999999999987443211111 111 1122222211 10 011122333445666777763
Q ss_pred C--cceeEEEEEecccccccccccccccCCccccc---cCHHHHHHHHHHHHhhcChHHHHHHHhcC--c-----c----
Q 035933 238 Y--KRLNWIWYITQPELACFILPFICIRGGSATMK---VSSDMIKKMHQEVEKICAPEHATVIKETK--E-----P---- 301 (405)
Q Consensus 238 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~---- 301 (405)
. +..+++++...+... ...+... .+++...+.+.+.+..|.+.+.+++.... . .
T Consensus 222 ~~~g~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 291 (430)
T 3ihm_A 222 SFNGMSTALVLENHIGSD----------LEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQG 291 (430)
T ss_dssp ETTEEEEEEEEEECTTSS----------SGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEE
T ss_pred CCCcceEEEEEEecCCCc----------HHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeec
Confidence 2 334444433333222 0011111 13333322333344557777766654433 1 0
Q ss_pred ceeeecccCCCCcCccccEEE-EccccccCCCCCchhhhhHHHHHHHHHHHHHhhCCCcHHHHHHHHHhhcc-cchHHHH
Q 035933 302 FLNLIADCDPLTQIYWDNVVL-IGDAAHPITPHCARSTNMAIADAAVLGKCLERWGPENLHSALEEHKSVRL-PVTNKQV 379 (405)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~v~l-vGDAah~~~P~~G~G~~~al~da~~la~~l~~~~~~~~~~~l~~y~~~r~-~~~~~~~ 379 (405)
..+.+. ..+...|..++++| +|||||.++|+.|||+|+||+||..|+++|.+.. +..++|..|+.+|+ .++....
T Consensus 292 ~~~~~~-~~~~~~~~~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~~--~~~~~~~~~~~~r~~~~~~~~~ 368 (430)
T 3ihm_A 292 GVVPAF-RDGHATLNNGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAHS--VYDLRFSEHLERRRQDRVLCAT 368 (430)
T ss_dssp CCCCEE-BCSEEECTTSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHCS--CCSHHHHHHHHHHHHHHHHHHH
T ss_pred ceeecc-cccccccCCCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHHH
Confidence 111221 34566778899998 9999999999999999999999999999999863 47889999998887 6777766
Q ss_pred HHHHHhh
Q 035933 380 LHSRRVG 386 (405)
Q Consensus 380 ~~s~~~~ 386 (405)
+.++.+.
T Consensus 369 ~~~~~~~ 375 (430)
T 3ihm_A 369 RWTNFTL 375 (430)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 6666654
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.87 E-value=1.8e-21 Score=187.07 Aligned_cols=142 Identities=15% Similarity=0.171 Sum_probs=101.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
..+||+||||||+|+++|+.|++.|++|+||||.+.+.. .....+.+.+.+.+..++... .... + .
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~----~~~~~~~~~~~~~l~~~g~~~-~~~~--~-------~ 156 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSR----HNVLHLWPFTIHDLRALGAKK-FYGR--F-------C 156 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCC----CCEEECCHHHHHHHHTTTHHH-HCTT--T-------T
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCC----CCcccCChhHHHHHHHcCCcc-cccc--c-------c
Confidence 458999999999999999999999999999999977532 234667777888887776521 1000 0 0
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEec-CCCeEEEEEeecC-CCceeEEee
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISH-DKSTVNVKAKNLR-TDVIIDVVG 161 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~-~~~~v~v~~~~~~-~g~~~~~~~ 161 (405)
......+++..+.+.|.+.+. .|+ ++++++|.+++.++ ++..+.|++. .. +|+..++++
T Consensus 157 ----------------~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~-~~~~g~~~~i~a 219 (497)
T 2bry_A 157 ----------------TGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQ-PNPPAQLASYEF 219 (497)
T ss_dssp ----------------CTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEE-SCCCHHHHTCCB
T ss_pred ----------------ccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEE-ECCCCCEEEEEc
Confidence 001123667888888888774 578 99999999998542 2345666532 13 553234899
Q ss_pred eEEEeecCCcccccccc
Q 035933 162 DLLVAADGSRSSVRQTF 178 (405)
Q Consensus 162 d~vV~AdG~~S~vr~~l 178 (405)
|+||+|||.+|.+|+..
T Consensus 220 d~VV~A~G~~S~~r~~~ 236 (497)
T 2bry_A 220 DVLISAAGGKFVPEGFT 236 (497)
T ss_dssp SEEEECCCTTCCCTTCE
T ss_pred CEEEECCCCCccccccc
Confidence 99999999999998765
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.80 E-value=1.3e-18 Score=159.31 Aligned_cols=151 Identities=15% Similarity=0.119 Sum_probs=83.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCC----Cc-----ceeeC---ccHHHHHHHhccChhhhhc
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPT----GA-----GIALH---LLSQKIVKSWLHQPDLLHN 74 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~----~~-----~~~l~---~~~~~~l~~~~~~~~~~~~ 74 (405)
++||+|||||++|+++|+.|++.|++|+||||.+.+...... +. ...+. +.....+..+... .....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 80 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQ-GHVAE 80 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHH-TSEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhC-CCeee
Confidence 379999999999999999999999999999999765221000 00 00111 2223333332210 00000
Q ss_pred ccCCccccccceecCccceeeeecccCCcccc--cccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeec
Q 035933 75 ITLPLTIDQNRAVDREKNICRVLARDENFNYL--QAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNL 151 (405)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~ 151 (405)
.... ........ . .........+ ......+.+.|.+ ++ ++++++|++++.++ ..|+|+ +
T Consensus 81 ~~~~-----~~~~~~~~-~---~~~~~~~~~~~~~~~~~~l~~~l~~----g~~i~~~~~v~~i~~~~--~~~~v~---~ 142 (336)
T 1yvv_A 81 WTPL-----LYNFHAGR-L---SPSPDEQVRWVGKPGMSAITRAMRG----DMPVSFSCRITEVFRGE--EHWNLL---D 142 (336)
T ss_dssp ECCC-----EEEESSSB-C---CCCCTTSCEEEESSCTHHHHHHHHT----TCCEECSCCEEEEEECS--SCEEEE---E
T ss_pred cccc-----ceeccCcc-c---ccCCCCCccEEcCccHHHHHHHHHc----cCcEEecCEEEEEEEeC--CEEEEE---e
Confidence 0000 00000000 0 0000000000 0112344444444 66 99999999998543 457776 5
Q ss_pred CCCceeEEeeeEEEeecCCccccccc
Q 035933 152 RTDVIIDVVGDLLVAADGSRSSVRQT 177 (405)
Q Consensus 152 ~~g~~~~~~~d~vV~AdG~~S~vr~~ 177 (405)
.+|+. ..++|+||+|+|.+|.+|..
T Consensus 143 ~~g~~-~~~a~~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 143 AEGQN-HGPFSHVIIATPAPQASTLL 167 (336)
T ss_dssp TTSCE-EEEESEEEECSCHHHHGGGG
T ss_pred CCCcC-ccccCEEEEcCCHHHHHHhh
Confidence 67764 23599999999999998854
No 31
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.59 E-value=2.1e-14 Score=133.00 Aligned_cols=67 Identities=6% Similarity=0.037 Sum_probs=49.3
Q ss_pred ccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcc-cccccc
Q 035933 108 AHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRS-SVRQTF 178 (405)
Q Consensus 108 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S-~vr~~l 178 (405)
++...+.+.|.+.+. .|+ ++++++|.++..+++ ..+.|+ +.+|+..+++||.||.|+|.+| .+.+.+
T Consensus 147 ~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~~~v~---~~~g~~~~~~a~~VV~A~G~~s~~l~~~~ 216 (369)
T 3dme_A 147 VDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPE-GGFELD---FGGAEPMTLSCRVLINAAGLHAPGLARRI 216 (369)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SSEEEE---ECTTSCEEEEEEEEEECCGGGHHHHHHTE
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-ceEEEE---ECCCceeEEEeCEEEECCCcchHHHHHHh
Confidence 556777888887774 578 999999999986433 336665 5677544599999999999998 344444
No 32
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.56 E-value=2.7e-13 Score=130.59 Aligned_cols=215 Identities=11% Similarity=-0.092 Sum_probs=109.9
Q ss_pred ccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCccc-cccc-ccCCCC
Q 035933 108 AHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSS-VRQT-FLPDSK 183 (405)
Q Consensus 108 ~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~-vr~~-l~~~~~ 183 (405)
++...+...|.+.+ +.|+ ++++++|+++..++ ..+.|+..+..+|+..+++||.||.|+|.+|. +++. +.....
T Consensus 146 v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~ 223 (501)
T 2qcu_A 146 VDDARLVLANAQMVVRKGGEVLTRTRATSARREN--GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSP 223 (501)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCS
T ss_pred EcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCcc
Confidence 56778888888776 4678 99999999998643 45566644335676556999999999999985 4442 321111
Q ss_pred CCcCceEEEEEEecCCCCCCchhhhhhhhccCCCCCceeEeecCCeEEEEEEeeCcceeEEEEEeccccccccccccccc
Q 035933 184 LRYTGYCAWRGVFDFSENENSETIQGIRKAYPELGNGVHTDLVPGTHTVLYELMYKRLNWIWYITQPELACFILPFICIR 263 (405)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (405)
...........+++.. .+ .....++...++..++++|..++...++. +.....
T Consensus 224 ~~i~p~rG~~~~~~~~--------------~~-~~~~~~~~~~dg~~~~~~P~~~g~~~iG~--t~~~~~---------- 276 (501)
T 2qcu_A 224 YGIRLIKGSHIVVPRV--------------HT-QKQAYILQNEDKRIVFVIPWMDEFSIIGT--TDVEYK---------- 276 (501)
T ss_dssp SCBCCEEEEEEEEECS--------------SS-CSCEEEEECTTSCEEEEEEETTTEEEEEC--CCEECC----------
T ss_pred cccccceeEEEEECCC--------------CC-CceEEEeecCCCCEEEEEEcCCCcEEEcC--CCCCCC----------
Confidence 1111111111112210 01 01122232234456677787655322221 110000
Q ss_pred CCccccccCHHHHHHHHHHHHhhcChHHHHHHHhcCccceee-ec----ccCCC-CcCccccEEE--EccccccCCCCCc
Q 035933 264 GGSATMKVSSDMIKKMHQEVEKICAPEHATVIKETKEPFLNL-IA----DCDPL-TQIYWDNVVL--IGDAAHPITPHCA 335 (405)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~-~~~~~~~v~l--vGDAah~~~P~~G 335 (405)
........+.+..+.+.+...+.++..+.. ......|. +. +..|. .....+.++. .+|..|.+-.++|
T Consensus 277 ~~~~~~~~~~~~~~~l~~~~~~~~p~~l~~----~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~G 352 (501)
T 2qcu_A 277 GDPKAVKIEESEINYLLNVYNTHFKKQLSR----DDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFG 352 (501)
T ss_dssp SCGGGCCCCHHHHHHHHHHHHHHBSSCCCG----GGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEEC
T ss_pred CCcCCCCCCHHHHHHHHHHHHHhcCCCCCc----ccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeC
Confidence 001122334555666666654443311111 11011111 11 11111 1122345665 5777677777788
Q ss_pred hhhhhHHHHHHHHHHHHHhh
Q 035933 336 RSTNMAIADAAVLGKCLERW 355 (405)
Q Consensus 336 ~G~~~al~da~~la~~l~~~ 355 (405)
.|+..+-.-|..+++.+.+.
T Consensus 353 g~~t~~~~~Ae~~~~~~~~~ 372 (501)
T 2qcu_A 353 GKLTTYRKLAEHALEKLTPY 372 (501)
T ss_dssp CCGGGHHHHHHHHHHHHGGG
T ss_pred ccccchHHHHHHHHHHHHHh
Confidence 89999888888888887654
No 33
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.54 E-value=7.8e-14 Score=129.84 Aligned_cols=64 Identities=16% Similarity=0.085 Sum_probs=47.7
Q ss_pred cccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCccc-ccccc
Q 035933 107 QAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSS-VRQTF 178 (405)
Q Consensus 107 ~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~-vr~~l 178 (405)
.++...+.+.|.+.+. .|+ ++++++|.++.. +++.+.|+ +++| ++++|.||.|+|.+|. +.+.+
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~--~~~~~~v~---~~~g---~~~a~~vV~A~G~~s~~l~~~~ 226 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVER--DGEALFIK---TPSG---DVWANHVVVASGVWSGMFFKQL 226 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEETTCCCCEEEC--SSSSEEEE---ETTE---EEEEEEEEECCGGGTHHHHHHT
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEE--ECCEEEEE---cCCc---eEEcCEEEECCChhHHHHHHhc
Confidence 4566788888888774 577 999999999984 33455555 4455 3899999999999986 65554
No 34
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.53 E-value=4.2e-14 Score=125.96 Aligned_cols=36 Identities=42% Similarity=0.635 Sum_probs=34.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
++||+|||||||||+||+.|+++|++|+||||.+.+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 489999999999999999999999999999998875
No 35
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.52 E-value=6.1e-15 Score=138.04 Aligned_cols=144 Identities=18% Similarity=0.233 Sum_probs=85.5
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCC-CCcc-eeeC--------------ccHHHHHHHhccC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNP-TGAG-IALH--------------LLSQKIVKSWLHQ 68 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~-~~~~-~~l~--------------~~~~~~l~~~~~~ 68 (405)
++++||+||||||||+++|+.|+++|++|+||||.+.+..... .|.+ ..+. ......+.++...
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~ 104 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ 104 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH
Confidence 4568999999999999999999999999999999987532100 0000 0000 0011122222110
Q ss_pred h--hhhhcccCCccccccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeE
Q 035933 69 P--DLLHNITLPLTIDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTV 144 (405)
Q Consensus 69 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v 144 (405)
. ..++..+.+. .....+..+....+..+.+.|.+.+. .|+ ++++++|.++..++ ..+
T Consensus 105 ~~~~~~~~~Gi~~-----------------~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~~ 165 (417)
T 3v76_A 105 DFVALVERHGIGW-----------------HEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SGF 165 (417)
T ss_dssp HHHHHHHHTTCCE-----------------EECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEE
T ss_pred HHHHHHHHcCCCc-----------------EEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEE
Confidence 0 0011111100 00011111223456788888888774 588 99999999998543 356
Q ss_pred EEEEeecCCCceeEEeeeEEEeecCCccc
Q 035933 145 NVKAKNLRTDVIIDVVGDLLVAADGSRSS 173 (405)
Q Consensus 145 ~v~~~~~~~g~~~~~~~d~vV~AdG~~S~ 173 (405)
.|+ +.+| +++||.||+|+|.+|.
T Consensus 166 ~V~---~~~g---~i~ad~VIlAtG~~S~ 188 (417)
T 3v76_A 166 RVT---TSAG---TVDAASLVVASGGKSI 188 (417)
T ss_dssp EEE---ETTE---EEEESEEEECCCCSSC
T ss_pred EEE---ECCc---EEEeeEEEECCCCccC
Confidence 666 5565 3899999999999993
No 36
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.52 E-value=5.5e-13 Score=125.07 Aligned_cols=65 Identities=9% Similarity=0.021 Sum_probs=46.4
Q ss_pred ccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcc-ccccccc
Q 035933 108 AHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRS-SVRQTFL 179 (405)
Q Consensus 108 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S-~vr~~l~ 179 (405)
++-..+.+.|.+.+. .|+ ++++++|+++..++ +..+.|+ +++| . +.+|.||.|+|.+| .+++.+.
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~-~~~~~v~---~~~g-~--~~a~~vV~a~G~~s~~l~~~~g 238 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDG-EKVTGVK---TTRG-T--IHAGKVALAGAGHSSVLAEMAG 238 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESS-SBEEEEE---ETTC-C--EEEEEEEECCGGGHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeC-CEEEEEE---eCCc-e--EECCEEEECCchhHHHHHHHcC
Confidence 445567777777663 577 99999999998542 3334454 4556 3 89999999999998 5666553
No 37
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.51 E-value=5e-13 Score=124.35 Aligned_cols=63 Identities=11% Similarity=0.012 Sum_probs=46.2
Q ss_pred ccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEE-EEEeecCCCceeEEeeeEEEeecCCcc-cccccc
Q 035933 108 AHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVN-VKAKNLRTDVIIDVVGDLLVAADGSRS-SVRQTF 178 (405)
Q Consensus 108 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~-v~~~~~~~g~~~~~~~d~vV~AdG~~S-~vr~~l 178 (405)
++...+.+.|.+.+. .|+ ++++++|++++.+ +..+. |+ +++| +++||.||.|+|.+| .+.+.+
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~--~~~v~gv~---~~~g---~i~a~~VV~A~G~~s~~l~~~~ 212 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIE--NNEIKGVK---TNKG---IIKTGIVVNATNAWANLINAMA 212 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEES--SSBEEEEE---ETTE---EEECSEEEECCGGGHHHHHHHH
T ss_pred ECHHHHHHHHHHHHHHCCCEEECCceEEEEEEE--CCEEEEEE---ECCc---EEECCEEEECcchhHHHHHHHc
Confidence 556777777877663 578 9999999999854 34555 55 4455 389999999999998 455544
No 38
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.51 E-value=9.2e-13 Score=131.52 Aligned_cols=59 Identities=14% Similarity=0.169 Sum_probs=46.0
Q ss_pred ccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCccc
Q 035933 108 AHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSS 173 (405)
Q Consensus 108 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~ 173 (405)
++...+.+.|.+.+. .|+ ++++++|+++..+++ .|.|+ +.+|.. +.||.||.|+|.+|.
T Consensus 414 v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~--~v~V~---t~~G~~--i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 414 LCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDD--CWLLN---FAGDQQ--ATHSVVVLANGHQIS 474 (676)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETT--EEEEE---ETTSCE--EEESEEEECCGGGGG
T ss_pred eCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCC--eEEEE---ECCCCE--EECCEEEECCCcchh
Confidence 555777788877764 588 999999999986443 57666 556665 899999999999985
No 39
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.46 E-value=2.7e-12 Score=128.32 Aligned_cols=59 Identities=10% Similarity=0.032 Sum_probs=44.6
Q ss_pred ccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCc-eeEEeeeEEEeecCCccc
Q 035933 108 AHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDV-IIDVVGDLLVAADGSRSS 173 (405)
Q Consensus 108 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~-~~~~~~d~vV~AdG~~S~ 173 (405)
++...+.+.|.+.+. .|+ ++++++|+++..+++ .|.|+ +.+|. . +.||.||.|+|.+|.
T Consensus 409 v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~--~v~V~---t~~G~~~--i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 409 LCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDS--QWQLT---FGQSQAA--KHHATVILATGHRLP 470 (689)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSS--SEEEE---EC-CCCC--EEESEEEECCGGGTT
T ss_pred ECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCC--eEEEE---eCCCcEE--EECCEEEECCCcchh
Confidence 455677777877763 588 999999999986443 46666 55665 4 899999999999985
No 40
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.46 E-value=8.8e-12 Score=116.17 Aligned_cols=58 Identities=17% Similarity=0.099 Sum_probs=43.5
Q ss_pred ccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCccc
Q 035933 108 AHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSS 173 (405)
Q Consensus 108 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~ 173 (405)
++...+.+.|.+.+. .|+ ++++++|.+++.+++ .+.|+ +++| +++||.||.|+|.+|.
T Consensus 147 ~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~--~~~v~---~~~g---~~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 147 LFSENCIRAYRELAEARGAKVLTHTRVEDFDISPD--SVKIE---TANG---SYTADKLIVSMGAWNS 206 (389)
T ss_dssp EEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSS--CEEEE---ETTE---EEEEEEEEECCGGGHH
T ss_pred EeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCC--eEEEE---eCCC---EEEeCEEEEecCccHH
Confidence 455677788877774 578 999999999985433 46665 4444 3899999999999874
No 41
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.43 E-value=9.1e-12 Score=116.47 Aligned_cols=37 Identities=24% Similarity=0.338 Sum_probs=34.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
.+||+|||||++|+++|+.|+++|++|+|+||.....
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~~ 40 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFFN 40 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 4799999999999999999999999999999987653
No 42
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.43 E-value=3.2e-12 Score=124.36 Aligned_cols=72 Identities=18% Similarity=0.083 Sum_probs=51.7
Q ss_pred cccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcc-ccccccc
Q 035933 107 QAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRS-SVRQTFL 179 (405)
Q Consensus 107 ~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S-~vr~~l~ 179 (405)
.++...+...|.+.+ ..|+ ++++++|+++..++ +..+.|++.+..+|+..+++||.||.|+|.+| .+++.++
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~-g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g 240 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQ-GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDR 240 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTT
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC-CeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcC
Confidence 355677777777766 4688 99999999998643 22234555444456666799999999999998 5666653
No 43
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.41 E-value=2.7e-13 Score=128.71 Aligned_cols=157 Identities=17% Similarity=0.155 Sum_probs=82.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCC-CCCcce-ee-Ccc-HHHHHHHhccChhhhhcc--cCCcc
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGN-PTGAGI-AL-HLL-SQKIVKSWLHQPDLLHNI--TLPLT 80 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~-~~~~~~-~l-~~~-~~~~l~~~~~~~~~~~~~--~~~~~ 80 (405)
++||+|||||+||+++|+.|+++|++|+|+||.+.+.... ..+.+. .+ +.. ....+..+.......... .+..
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 104 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN- 104 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH-
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH-
Confidence 4899999999999999999999999999999987642100 001110 00 000 111222221111000000 0000
Q ss_pred ccccceecCc-cceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCcee
Q 035933 81 IDQNRAVDRE-KNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVII 157 (405)
Q Consensus 81 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~ 157 (405)
.....+.... .... ......-++. ......+.+.|.+.+. .|+ ++++++|+++..++ +..+.|+ +.+|+.
T Consensus 105 ~~~~~~~~~~G~~~~-~~~~g~~~p~-~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~-~~v~~V~---~~~G~~- 177 (447)
T 2i0z_A 105 EDIITFFENLGVKLK-EEDHGRMFPV-SNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYEN-GQTKAVI---LQTGEV- 177 (447)
T ss_dssp HHHHHHHHHTTCCEE-ECGGGEEEET-TCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEE---ETTCCE-
T ss_pred HHHHHHHHhcCCceE-EeeCCEEECC-CCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC-CcEEEEE---ECCCCE-
Confidence 0000000000 0000 0000000000 0134667777777663 588 99999999998643 3225555 456754
Q ss_pred EEeeeEEEeecCCcc
Q 035933 158 DVVGDLLVAADGSRS 172 (405)
Q Consensus 158 ~~~~d~vV~AdG~~S 172 (405)
++||.||.|+|.+|
T Consensus 178 -i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 178 -LETNHVVIAVGGKS 191 (447)
T ss_dssp -EECSCEEECCCCSS
T ss_pred -EECCEEEECCCCCc
Confidence 89999999999999
No 44
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.41 E-value=2.4e-12 Score=114.49 Aligned_cols=142 Identities=15% Similarity=0.140 Sum_probs=88.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEccCCCCCCCCC-CCc---ceeeCccHHHHHHHhccChhhhhcccCCcc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILA-GWDVVVIEKTRGPPTGNP-TGA---GIALHLLSQKIVKSWLHQPDLLHNITLPLT 80 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~-g~~v~i~E~~~~~~~~~~-~~~---~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (405)
.++||+||||||+|+++|+.|++. |++|+|+||.+.+..... .+. .+.+.....+.+++++.. ..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~----------~~ 107 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVA----------YD 107 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCC----------CE
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCC----------cc
Confidence 457999999999999999999997 999999999987532111 010 112222334444444331 00
Q ss_pred ccccceecCccceeeeecccCCcccccccHHHHHHHHHhcC-C-Cce-EEecceEEEEEEecCCCeE-EEEEee----cC
Q 035933 81 IDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-P-VEI-VFWGHLYLTFCISHDKSTV-NVKAKN----LR 152 (405)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~-~~~-i~~~~~v~~i~~~~~~~~v-~v~~~~----~~ 152 (405)
. .+ ......++..+...|.+.+ + .|+ ++++++|.++..+++ .+ .+.... +.
T Consensus 108 ~------~~-------------~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~--~v~gv~~~~~~~~~~ 166 (284)
T 1rp0_A 108 E------QD-------------TYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGN--RVGGVVTNWALVAQN 166 (284)
T ss_dssp E------CS-------------SEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETT--EEEEEEEEEHHHHTC
T ss_pred c------CC-------------CEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCC--eEEEEEEeccccccc
Confidence 0 00 0001124566777777665 4 588 999999999985432 23 233221 01
Q ss_pred --C---CceeEEeeeEEEeecCCcccccccc
Q 035933 153 --T---DVIIDVVGDLLVAADGSRSSVRQTF 178 (405)
Q Consensus 153 --~---g~~~~~~~d~vV~AdG~~S~vr~~l 178 (405)
+ ++..++++|.||.|+|.+|.++...
T Consensus 167 ~~~g~~g~~~~i~ad~VV~AtG~~s~~~~~~ 197 (284)
T 1rp0_A 167 HHTQSCMDPNVMEAKIVVSSCGHDGPFGATG 197 (284)
T ss_dssp TTTSSCCCCEEEEEEEEEECCCSSSTTTTHH
T ss_pred cCccccCceEEEECCEEEECCCCchHHHHHH
Confidence 2 3345699999999999999987653
No 45
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.41 E-value=4.7e-12 Score=117.62 Aligned_cols=63 Identities=16% Similarity=0.100 Sum_probs=47.1
Q ss_pred ccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCccc-ccccc
Q 035933 108 AHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSS-VRQTF 178 (405)
Q Consensus 108 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~-vr~~l 178 (405)
++...+...|.+.+. .|+ ++++++|+++..+++ .+.|+ +++| ++.||.||.|+|.+|. +.+.+
T Consensus 151 ~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~--~~~V~---t~~g---~i~a~~VV~A~G~~s~~l~~~~ 216 (381)
T 3nyc_A 151 IDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDG--AWEVR---CDAG---SYRAAVLVNAAGAWCDAIAGLA 216 (381)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETT--EEEEE---CSSE---EEEESEEEECCGGGHHHHHHHH
T ss_pred ECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCC--eEEEE---eCCC---EEEcCEEEECCChhHHHHHHHh
Confidence 566777788877774 588 999999999986443 46666 5555 3899999999999984 44444
No 46
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.41 E-value=9.4e-14 Score=129.53 Aligned_cols=146 Identities=13% Similarity=0.167 Sum_probs=82.5
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCC-CCcce-ee-----Cc--------c-HHHHHHHhccC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNP-TGAGI-AL-----HL--------L-SQKIVKSWLHQ 68 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~-~~~~~-~l-----~~--------~-~~~~l~~~~~~ 68 (405)
|+++||+||||||||+++|+.|+++|.+|+|+||.+.+..... .+.+. .+ .+ . ....+..+...
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 4568999999999999999999999999999999876421000 00000 00 00 0 00111111000
Q ss_pred h--hhhhcccCCccccccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecC--CC
Q 035933 69 P--DLLHNITLPLTIDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHD--KS 142 (405)
Q Consensus 69 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~--~~ 142 (405)
. +.+...+.+.. ... ....+ +. . ....+.+.|.+.+. .|+ ++++++|+++..+++ +.
T Consensus 82 ~~~~~~~~~Gi~~~-----~~~----~g~~~------p~-~-~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~ 144 (401)
T 2gqf_A 82 DFISLVAEQGITYH-----EKE----LGQLF------CD-E-GAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKV 144 (401)
T ss_dssp HHHHHHHHTTCCEE-----ECS----TTEEE------ET-T-CTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSC
T ss_pred HHHHHHHhCCCceE-----ECc----CCEEc------cC-C-CHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCC
Confidence 0 00001111000 000 00000 10 0 45667777777664 578 999999999985421 23
Q ss_pred eEEEEEeecCCCceeEEeeeEEEeecCCccc
Q 035933 143 TVNVKAKNLRTDVIIDVVGDLLVAADGSRSS 173 (405)
Q Consensus 143 ~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~ 173 (405)
.+.|+ .++| +++||.||.|+|..|.
T Consensus 145 ~~~v~---~~~g---~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 145 RFVLQ---VNST---QWQCKNLIVATGGLSM 169 (401)
T ss_dssp CEEEE---ETTE---EEEESEEEECCCCSSC
T ss_pred eEEEE---ECCC---EEECCEEEECCCCccC
Confidence 46665 4454 3899999999999993
No 47
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.40 E-value=3.4e-12 Score=114.54 Aligned_cols=143 Identities=10% Similarity=0.111 Sum_probs=89.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCCCCCCCCC----cceeeCccHHHHHHHhccChhhhhcccCCcc
Q 035933 7 KPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGPPTGNPTG----AGIALHLLSQKIVKSWLHQPDLLHNITLPLT 80 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~~~~~~~~----~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (405)
.+||+||||||||+++|+.|+++ |++|+|+|+.+.+......+ ....+.+.....+++++... ...
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~---~~~----- 150 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPY---EDE----- 150 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCC---EEC-----
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcc---ccc-----
Confidence 58999999999999999999997 99999999998754211100 11223344555666555421 100
Q ss_pred ccccceecCccceeeeecccCCcccccccHHHHHHHHHhcC-C-Cce-EEecceEEEEEEecCC---------------C
Q 035933 81 IDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-P-VEI-VFWGHLYLTFCISHDK---------------S 142 (405)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~-~~~-i~~~~~v~~i~~~~~~---------------~ 142 (405)
+ . .....+..++.+.|.+.+ . .++ +++++.+.++..++++ +
T Consensus 151 --------G-~------------~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g 209 (344)
T 3jsk_A 151 --------G-D------------YVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEA 209 (344)
T ss_dssp --------S-S------------EEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------C
T ss_pred --------C-C------------eEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCC
Confidence 0 0 000112355667777665 3 488 9999999998765521 1
Q ss_pred --eE---EEEEee-cCCC------ceeEEeeeEEEeecCCcccccccc
Q 035933 143 --TV---NVKAKN-LRTD------VIIDVVGDLLVAADGSRSSVRQTF 178 (405)
Q Consensus 143 --~v---~v~~~~-~~~g------~~~~~~~d~vV~AdG~~S~vr~~l 178 (405)
.+ .+.+.. ..+| +..++++++||+|||..|.+++.+
T Consensus 210 ~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 210 KVRIAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp CEEEEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred CceEeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHHH
Confidence 22 221110 0122 334699999999999999987765
No 48
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.39 E-value=2.3e-12 Score=122.41 Aligned_cols=156 Identities=13% Similarity=0.045 Sum_probs=87.1
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChh-------hhhc-
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPD-------LLHN- 74 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~-------~~~~- 74 (405)
++.+||+||||||||+++|..|++.|+ +|+|||+.+.+.. .+....... ..+..... .+..
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG------~~~~~~~~~---~~~~ip~~~~~~~~~~~~~g 74 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGG------VWNYTSTLS---NKLPVPSTNPILTTEPIVGP 74 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSST------TCSCCSCCC---SCCCSSBCCTTCCCCCBCCS
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCC------eecCCCCCC---cccccccccccccccccccc
Confidence 346899999999999999999999999 9999999876421 111110000 00000000 0000
Q ss_pred ---ccCCccccccceecCccc--eee--eecccCCcccccccHHHHHHHHHhcCCC-ce-EEecceEEEEEEecCCCeEE
Q 035933 75 ---ITLPLTIDQNRAVDREKN--ICR--VLARDENFNYLQAHWTDLHGLIYNTLPV-EI-VFWGHLYLTFCISHDKSTVN 145 (405)
Q Consensus 75 ---~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~i~~~~~~~~v~ 145 (405)
..+... .+.......+ ... ....... ....+.+..+.++|.+.+.. +. ++++++|++++.. +..|+
T Consensus 75 ~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~--~~~~~ 149 (447)
T 2gv8_A 75 AALPVYPSP--LYRDLQTNTPIELMGYCDQSFKPQ-TLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKK--DGSWV 149 (447)
T ss_dssp SSCCBCCCC--CCTTCBCSSCHHHHSCTTCCCCTT-CCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEE--TTEEE
T ss_pred cccCCccCc--hhhhhccCCCHHHhccCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeC--CCeEE
Confidence 000000 0000000000 000 0000001 11235778888888887643 55 8899999999854 44677
Q ss_pred EEEeecCCCc-eeEEeeeEEEeecCCcccc
Q 035933 146 VKAKNLRTDV-IIDVVGDLLVAADGSRSSV 174 (405)
Q Consensus 146 v~~~~~~~g~-~~~~~~d~vV~AdG~~S~v 174 (405)
|++.+..+|+ ..++.+|.||+|+|.+|.-
T Consensus 150 V~~~~~~~G~~~~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 150 VTYKGTKAGSPISKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp EEEEESSTTCCEEEEEESEEEECCCSSSSB
T ss_pred EEEeecCCCCeeEEEEeCEEEECCCCCCCC
Confidence 7754333465 3358999999999998754
No 49
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.39 E-value=1.8e-12 Score=119.32 Aligned_cols=130 Identities=12% Similarity=0.167 Sum_probs=83.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
+++||+||||||||+++|+.|+++|++|+|||+.+.+ |..+... + + .+ ....+... ..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~------gg~~~~~---------~---~-~~-~~~~~~~~--~~ 59 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASP------GGAWQHA---------W---H-SL-HLFSPAGW--SS 59 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSS------SGGGGGS---------C---T-TC-BCSSCGGG--SC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC------CCcccCC---------C---C-Cc-EecCchhh--hh
Confidence 3589999999999999999999999999999998764 2111100 0 0 00 00000000 00
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEE-EEEeecCCCceeEEeee
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVN-VKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~-v~~~~~~~g~~~~~~~d 162 (405)
... ... .........+..+.+.|.+.+. .++ ++++++|.+++.+ +..+. |+ +++| ++.+|
T Consensus 60 ~~~--------~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~--~~~~~~v~---~~~g---~~~~d 122 (357)
T 4a9w_A 60 IPG--------WPM-PASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHF--GERLRVVA---RDGR---QWLAR 122 (357)
T ss_dssp CSS--------SCC-CCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEE--TTEEEEEE---TTSC---EEEEE
T ss_pred CCC--------CCC-CCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEC--CCcEEEEE---eCCC---EEEeC
Confidence 000 000 0111223567788888887664 477 9999999999854 34666 66 5566 38999
Q ss_pred EEEeecCCcccc
Q 035933 163 LLVAADGSRSSV 174 (405)
Q Consensus 163 ~vV~AdG~~S~v 174 (405)
.||.|+|.+|.-
T Consensus 123 ~vV~AtG~~~~~ 134 (357)
T 4a9w_A 123 AVISATGTWGEA 134 (357)
T ss_dssp EEEECCCSGGGB
T ss_pred EEEECCCCCCCC
Confidence 999999998743
No 50
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.38 E-value=1.6e-12 Score=125.67 Aligned_cols=139 Identities=14% Similarity=0.183 Sum_probs=87.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHH-HcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALI-LAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~-~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
+.+||+|||||+||+++|+.|+ +.|++|+|||+++.. |..+..+ .+....-......+ ..
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~------GGtw~~~--------~ypg~~~d~~s~~~-----~~ 67 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGP------GGTWYWN--------RYPGALSDTESHLY-----RF 67 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSS------CTHHHHC--------CCTTCEEEEEGGGS-----SC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCC------CCccccc--------CCCCceecCCccee-----ee
Confidence 4579999999999999999999 899999999998764 2111000 00000000000000 00
Q ss_pred ceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce---EEecceEEEEEEecCCCeEEEEEeecCCCceeEEe
Q 035933 85 RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI---VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVV 160 (405)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~---i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~ 160 (405)
.. . ..............++..+.++|.+.+. .++ ++++++|.+++++++...|+|+ +++|+. +.
T Consensus 68 ~~--~-----~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~---~~~G~~--i~ 135 (540)
T 3gwf_A 68 SF--D-----RDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVT---TDHGEV--YR 135 (540)
T ss_dssp CS--C-----HHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEE---ETTSCE--EE
T ss_pred cc--c-----cccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEE---EcCCCE--EE
Confidence 00 0 0000001112223566777777777553 232 8999999999987777788887 667775 89
Q ss_pred eeEEEeecCCccccc
Q 035933 161 GDLLVAADGSRSSVR 175 (405)
Q Consensus 161 ~d~vV~AdG~~S~vr 175 (405)
||+||.|+|..|.-+
T Consensus 136 ad~lV~AtG~~s~p~ 150 (540)
T 3gwf_A 136 AKYVVNAVGLLSAIN 150 (540)
T ss_dssp EEEEEECCCSCCSBC
T ss_pred eCEEEECCcccccCC
Confidence 999999999887543
No 51
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.38 E-value=1.9e-12 Score=122.75 Aligned_cols=59 Identities=12% Similarity=0.076 Sum_probs=45.3
Q ss_pred ccHHHHHHHHHhcCC-Cce-EEecc---eEEEEEEecCCCeEE-EEEeecCCCceeEEeeeEEEeecCCccc
Q 035933 108 AHWTDLHGLIYNTLP-VEI-VFWGH---LYLTFCISHDKSTVN-VKAKNLRTDVIIDVVGDLLVAADGSRSS 173 (405)
Q Consensus 108 ~~r~~l~~~L~~~~~-~~~-i~~~~---~v~~i~~~~~~~~v~-v~~~~~~~g~~~~~~~d~vV~AdG~~S~ 173 (405)
++...+...|.+.+. .|+ +++++ +|+++..+ +..++ |+ +.+|+. +.||.||.|+|.+|.
T Consensus 158 ~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~--~~~v~gV~---t~~G~~--i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 158 AHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFE--NNDVKGAV---TADGKI--WRAERTFLCAGASAG 222 (438)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEE--TTEEEEEE---ETTTEE--EECSEEEECCGGGGG
T ss_pred ecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEec--CCeEEEEE---ECCCCE--EECCEEEECCCCChh
Confidence 455677778877774 588 99999 99999854 33555 65 567754 899999999999985
No 52
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.38 E-value=3e-12 Score=124.45 Aligned_cols=139 Identities=16% Similarity=0.148 Sum_probs=86.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
..+||+|||||++|+++|+.|++.|++|+|||+.+.. |..+. .+..+..... .+.......
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~------GG~w~-----------~~~~pg~~~d--~~~~~~~~~ 75 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDV------GGVWY-----------WNRYPGARCD--IESIEYCYS 75 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS------CTHHH-----------HCCCTTCBCS--SCTTTSSCC
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC------CCccc-----------ccCCCceeec--ccccccccc
Confidence 3579999999999999999999999999999998764 22110 0000000000 000000000
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcC---CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEee
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL---PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVG 161 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~ 161 (405)
+ ... ...........+.+..+.++|...+ ..+. ++++++|.+++++++...|+|+ +++|++ ++|
T Consensus 76 f-~~~------~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~---~~~G~~--~~a 143 (542)
T 1w4x_A 76 F-SEE------VLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVD---TNHGDR--IRA 143 (542)
T ss_dssp S-CHH------HHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEE---ETTCCE--EEE
T ss_pred c-Chh------hhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEE---ECCCCE--EEe
Confidence 0 000 0000011112345677777776544 2245 8999999999987766778887 567765 899
Q ss_pred eEEEeecCCccccc
Q 035933 162 DLLVAADGSRSSVR 175 (405)
Q Consensus 162 d~vV~AdG~~S~vr 175 (405)
|+||.|+|..|.-+
T Consensus 144 d~vV~AtG~~s~p~ 157 (542)
T 1w4x_A 144 RYLIMASGQLSVPQ 157 (542)
T ss_dssp EEEEECCCSCCCCC
T ss_pred CEEEECcCCCCCCC
Confidence 99999999987543
No 53
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.37 E-value=4e-12 Score=109.52 Aligned_cols=125 Identities=18% Similarity=0.149 Sum_probs=81.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccC-h-hhhhcccCCccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQ-P-DLLHNITLPLTIDQ 83 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~-~-~~~~~~~~~~~~~~ 83 (405)
+++||+||||||+|+.+|+.|++.|.+|+|+|+.... .| ..+.+. ++.. . ..+.. +
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~-----~G--~~~~~~-------~~~~~~~~~~~~------~-- 59 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDA-----VM--MPFLPP-------KPPFPPGSLLER------A-- 59 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGG-----TT--CCSSCC-------CSCCCTTCHHHH------H--
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCc-----CC--cccCcc-------ccccchhhHHhh------h--
Confidence 4689999999999999999999999999999998431 11 111110 0000 0 00000 0
Q ss_pred cceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-C-ce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEe
Q 035933 84 NRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-V-EI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVV 160 (405)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~-~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~ 160 (405)
.+ ...+ +|..+.+.|.+.++ . ++ ++ +++|.++..++ +..+.|. +++|.. ++
T Consensus 60 ---~d------------~~g~----~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~-~~v~~v~---~~~g~~--i~ 113 (232)
T 2cul_A 60 ---YD------------PKDE----RVWAFHARAKYLLEGLRPLHLF-QATATGLLLEG-NRVVGVR---TWEGPP--AR 113 (232)
T ss_dssp ---CC------------TTCC----CHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET-TEEEEEE---ETTSCC--EE
T ss_pred ---cc------------CCCC----CHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC-CEEEEEE---ECCCCE--EE
Confidence 00 0001 57788888888774 3 77 66 67999998543 2223444 557764 89
Q ss_pred eeEEEeecCCcccccccc
Q 035933 161 GDLLVAADGSRSSVRQTF 178 (405)
Q Consensus 161 ~d~vV~AdG~~S~vr~~l 178 (405)
+|+||.|+|.+|..+..+
T Consensus 114 a~~VV~A~G~~s~~~~~~ 131 (232)
T 2cul_A 114 GEKVVLAVGSFLGARLFL 131 (232)
T ss_dssp CSEEEECCTTCSSCEEEE
T ss_pred CCEEEECCCCChhhceec
Confidence 999999999999887654
No 54
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.36 E-value=6.7e-12 Score=115.73 Aligned_cols=125 Identities=14% Similarity=0.136 Sum_probs=82.5
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccc
Q 035933 4 RMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQ 83 (405)
Q Consensus 4 ~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (405)
||+.+||+||||||||+++|+.|++.|++|+|||+.+.+ |..+ ..+ .+...
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~------gg~~----------~~~-----------~~~~~-- 61 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQL------GGQL----------AAL-----------YPEKH-- 61 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS------CHHH----------HHT-----------CTTSE--
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCC------CCcc----------ccc-----------CCCcc--
Confidence 455689999999999999999999999999999998653 1100 000 00000
Q ss_pred cceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEee
Q 035933 84 NRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVG 161 (405)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~ 161 (405)
..+. .....+.+..+.+.|.+.+. .++ ++++++|.++...+ +..++|+ +.+|.. +.+
T Consensus 62 --~~~~-------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~-~~~~~v~---~~~g~~--~~~ 120 (360)
T 3ab1_A 62 --IYDV-------------AGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLD-DGTFETR---TNTGNV--YRS 120 (360)
T ss_dssp --ECCS-------------TTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECT-TSCEEEE---ETTSCE--EEE
T ss_pred --cccC-------------CCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECC-CceEEEE---ECCCcE--EEe
Confidence 0000 00011345666777776663 467 88899999998643 2356666 556754 899
Q ss_pred eEEEeecCCcccccccc
Q 035933 162 DLLVAADGSRSSVRQTF 178 (405)
Q Consensus 162 d~vV~AdG~~S~vr~~l 178 (405)
|.||.|+|..|..++.+
T Consensus 121 ~~li~AtG~~~~~~~~~ 137 (360)
T 3ab1_A 121 RAVLIAAGLGAFEPRKL 137 (360)
T ss_dssp EEEEECCTTCSCCBCCC
T ss_pred eEEEEccCCCcCCCCCC
Confidence 99999999988655543
No 55
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.36 E-value=2.5e-11 Score=117.11 Aligned_cols=37 Identities=24% Similarity=0.436 Sum_probs=31.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPT 44 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~ 44 (405)
++|||||||++||+||+.|+++|++|+|+|+++.+..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG 38 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGG 38 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-----
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCC
Confidence 5899999999999999999999999999999988643
No 56
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.35 E-value=7e-12 Score=119.37 Aligned_cols=153 Identities=14% Similarity=0.101 Sum_probs=87.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---cCCc---EEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccc
Q 035933 8 PKAIIVGGSIAGISCAKALIL---AGWD---VVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTI 81 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~---~g~~---v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~ 81 (405)
+||+||||||||+++|..|++ .|++ |+|||+.+.+ |..+......- ...++.. .....+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~------GG~w~~~~~~g--~~~~g~~---~~~~~y~--- 68 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADW------GGQWNYTWRTG--LDENGEP---VHSSMYR--- 68 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSS------CGGGSCCSCCS--BCTTSSB---CCCCCCT---
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCC------CCEeecCCCCC--ccccCCC---CcCcccc---
Confidence 699999999999999999999 9999 9999998764 22221111000 0000100 0000000
Q ss_pred cccceecCccc--ee-eeecccC-CcccccccHHHHHHHHHhcCCC-ce---EEecceEEEEEEecCCCeEEEEEeecCC
Q 035933 82 DQNRAVDREKN--IC-RVLARDE-NFNYLQAHWTDLHGLIYNTLPV-EI---VFWGHLYLTFCISHDKSTVNVKAKNLRT 153 (405)
Q Consensus 82 ~~~~~~~~~~~--~~-~~~~~~~-~~~~~~~~r~~l~~~L~~~~~~-~~---i~~~~~v~~i~~~~~~~~v~v~~~~~~~ 153 (405)
.......... +. ..+.... ......+++..+.+.|.+.++. ++ ++++++|.++...++...|+|++.+..+
T Consensus 69 -~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~ 147 (464)
T 2xve_A 69 -YLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTT 147 (464)
T ss_dssp -TCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTT
T ss_pred -chhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCC
Confidence 0000000000 00 0000000 0012235678888888776642 33 7889999999876655578887554344
Q ss_pred CceeEEeeeEEEeecCCccccc
Q 035933 154 DVIIDVVGDLLVAADGSRSSVR 175 (405)
Q Consensus 154 g~~~~~~~d~vV~AdG~~S~vr 175 (405)
|+..++.+|.||.|+|.+|.-+
T Consensus 148 g~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 148 DTIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp TEEEEEEESEEEECCCSSSSBC
T ss_pred CceEEEEcCEEEECCCCCCCCc
Confidence 6445689999999999877654
No 57
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.34 E-value=7e-11 Score=112.93 Aligned_cols=62 Identities=18% Similarity=0.225 Sum_probs=46.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC------CcEEEEccCCCCCCCCC----------CCc--ceeeCccHHHHHHHhccC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAG------WDVVVIEKTRGPPTGNP----------TGA--GIALHLLSQKIVKSWLHQ 68 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g------~~v~i~E~~~~~~~~~~----------~~~--~~~l~~~~~~~l~~~~~~ 68 (405)
++||+|||||++||++|+.|+++| ++|+|+|+++.+..... .|. .....+...++++++++.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~~~s~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~ 84 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGKIQTVKKDGYIIERGPDSFLERKKSAPQLVKDLGLE 84 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTTCCEECCTTCCEESSCCCEETTCTHHHHHHHHTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCceEEEeccCCEEeccChhhhhhCCHHHHHHHHHcCCc
Confidence 479999999999999999999999 99999999876543210 111 112245667888888774
No 58
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.33 E-value=3.4e-12 Score=123.63 Aligned_cols=140 Identities=16% Similarity=0.132 Sum_probs=86.1
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
++.+||+|||||+||+++|+.|++.|++|+|||+++.. |..+.. +..+. .....+......
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~------GGtw~~-----------~~yPg--~~~d~~~~~y~~ 67 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDV------GGTWYW-----------NRYPG--CRLDTESYAYGY 67 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS------CTHHHH-----------CCCTT--CBCSSCHHHHCH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCC------CCcccc-----------CCCCc--eeecCchhhccc
Confidence 34689999999999999999999999999999998764 221100 00000 000000000000
Q ss_pred ceecCccceeeeecccCCcccccccHHHHHHHHHhcCCC-c--e-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEe
Q 035933 85 RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPV-E--I-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVV 160 (405)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~--~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~ 160 (405)
.+ ... .............+.++...|.+.+.. + . ++++++|.+++++++...|+|+ +++|++ ++
T Consensus 68 ~f-~~~------~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~---~~~G~~--~~ 135 (545)
T 3uox_A 68 FA-LKG------IIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVT---LDNEEV--VT 135 (545)
T ss_dssp HH-HTT------SSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEE---ETTTEE--EE
T ss_pred cc-Ccc------cccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEE---ECCCCE--EE
Confidence 00 000 000011122235667777777665532 2 2 8899999999988777788888 667765 89
Q ss_pred eeEEEeecCCccccc
Q 035933 161 GDLLVAADGSRSSVR 175 (405)
Q Consensus 161 ~d~vV~AdG~~S~vr 175 (405)
||+||.|+|..|.-+
T Consensus 136 ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 136 CRFLISATGPLSASR 150 (545)
T ss_dssp EEEEEECCCSCBC--
T ss_pred eCEEEECcCCCCCCc
Confidence 999999999876543
No 59
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.33 E-value=5.6e-12 Score=122.19 Aligned_cols=137 Identities=15% Similarity=0.133 Sum_probs=86.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHh-ccChhhhhcccCCcccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSW-LHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~ 84 (405)
+.+||+|||||+||+++|+.|++.|++|+|||+.+.. |..+..+ .+ +. ....+......
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~------GGtw~~~--------~ypg~------~~dv~s~~y~~ 79 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGV------GGVWYWN--------RYPGA------RCDVESIDYSY 79 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS------CTHHHHC--------CCTTC------BCSSCTTTSSC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCC------CCccccC--------CCCCc------eeCCCchhccc
Confidence 3579999999999999999999999999999998764 2211100 00 00 00000000000
Q ss_pred ceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cc--e-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEe
Q 035933 85 RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VE--I-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVV 160 (405)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~--~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~ 160 (405)
.+. ..............++.++.++|.+.+. .+ . ++++++|++++++++...|+|+ +.+|++ +.
T Consensus 80 ~f~-------~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~---~~~G~~--i~ 147 (549)
T 4ap3_A 80 SFS-------PELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVR---TDRGDE--VS 147 (549)
T ss_dssp CSC-------HHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEE---ETTCCE--EE
T ss_pred ccc-------cccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEE---ECCCCE--EE
Confidence 000 0000001111223566777777776552 22 2 8899999999988777788888 667775 89
Q ss_pred eeEEEeecCCcccc
Q 035933 161 GDLLVAADGSRSSV 174 (405)
Q Consensus 161 ~d~vV~AdG~~S~v 174 (405)
||+||.|+|..|.-
T Consensus 148 ad~lV~AtG~~s~p 161 (549)
T 4ap3_A 148 ARFLVVAAGPLSNA 161 (549)
T ss_dssp EEEEEECCCSEEEC
T ss_pred eCEEEECcCCCCCC
Confidence 99999999987644
No 60
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.31 E-value=1.1e-11 Score=119.24 Aligned_cols=59 Identities=10% Similarity=0.057 Sum_probs=43.4
Q ss_pred cHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCccc
Q 035933 109 HWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSS 173 (405)
Q Consensus 109 ~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~ 173 (405)
....+.+.|.+.+. .|+ ++++++|+++..++ +..+.|+ +++|+. +.||+||.|+|..|.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~-~~v~gV~---l~~G~~--i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMED-GQITGVT---LSNGEE--IKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESS-SBEEEEE---ETTSCE--EECSCEEECCCTTCH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeC-CEEEEEE---ECCCCE--EECCEEEECCCCChh
Confidence 34566667777663 578 99999999998543 2233355 567775 899999999999995
No 61
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.31 E-value=1.6e-11 Score=112.03 Aligned_cols=123 Identities=14% Similarity=0.147 Sum_probs=81.5
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
|+++||+||||||||+++|+.|++.|++|+|||+.+.+ |..+ . .. .+...
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~------gg~~---------~-~~-----------~~~~~--- 52 (335)
T 2zbw_A 3 ADHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEP------GGQL---------T-AL-----------YPEKY--- 52 (335)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS------CHHH---------H-HT-----------CTTSE---
T ss_pred CCcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC------CCee---------e-cc-----------CCCce---
Confidence 45689999999999999999999999999999998753 1100 0 00 00000
Q ss_pred ceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeee
Q 035933 85 RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d 162 (405)
..+. .. ...+.+..+.+.|.+.+. .++ ++++++|..++.+++ .++|. +.+|.. +.+|
T Consensus 53 -~~~~-----------~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~--~~~v~---~~~g~~--~~~~ 111 (335)
T 2zbw_A 53 -IYDV-----------AG--FPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGD--LFKVT---TSQGNA--YTAK 111 (335)
T ss_dssp -ECCS-----------TT--CSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETT--EEEEE---ETTSCE--EEEE
T ss_pred -eecc-----------CC--CCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCC--EEEEE---ECCCCE--EEeC
Confidence 0000 00 011344566666766554 366 888999999986433 56665 556654 8999
Q ss_pred EEEeecCCcccccccc
Q 035933 163 LLVAADGSRSSVRQTF 178 (405)
Q Consensus 163 ~vV~AdG~~S~vr~~l 178 (405)
.||.|+|..|...+.+
T Consensus 112 ~lv~AtG~~~~~p~~~ 127 (335)
T 2zbw_A 112 AVIIAAGVGAFEPRRI 127 (335)
T ss_dssp EEEECCTTSEEEECCC
T ss_pred EEEECCCCCCCCCCCC
Confidence 9999999987655443
No 62
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.31 E-value=1.9e-11 Score=119.44 Aligned_cols=163 Identities=13% Similarity=0.105 Sum_probs=91.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCC-CCcceeeCccHHHHHHHhccChh--------------
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNP-TGAGIALHLLSQKIVKSWLHQPD-------------- 70 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~~-------------- 70 (405)
.++||+|||||+||+++|+.|+++|++|+||||.+.+...+. .+.++.... ....+.++....
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~--~~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVG--TKQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSS--CHHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccC--CHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 357999999999999999999999999999999987643211 122332211 111222221100
Q ss_pred -------------------hhhcccCCccccccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEec
Q 035933 71 -------------------LLHNITLPLTIDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWG 129 (405)
Q Consensus 71 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~ 129 (405)
.+...+.+... .... +.....+..... ...+....+.+.|.+.+. .|+ ++++
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~--~~~~-~g~~~~r~~~~~----~~~~~~~~l~~~L~~~~~~~gv~i~~~ 270 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDD--LKRS-GGARVDRTHRPH----GGKSSGPEIIDTLRKAAKEQGIDTRLN 270 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCE--EECC-TTCSSCCEEECS----SSSCHHHHHHHHHHHHHHHTTCCEECS
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCcccc--cccc-CCCCCCceeecC----CCCCCHHHHHHHHHHHHHhcCCEEEeC
Confidence 00011111000 0000 000000000000 001335677778877763 588 9999
Q ss_pred ceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcccccccc
Q 035933 130 HLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSSVRQTF 178 (405)
Q Consensus 130 ~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~vr~~l 178 (405)
++|+++..++++..+.|.+. ..+|+...+.+|.||.|+|.+|..++++
T Consensus 271 ~~v~~l~~~~~g~v~Gv~~~-~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 271 SRVVKLVVNDDHSVVGAVVH-GKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEEEEEEECTTSBEEEEEEE-ETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred CEEEEEEECCCCcEEEEEEE-eCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 99999986432322224332 2467655689999999999999875543
No 63
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.30 E-value=3.3e-10 Score=106.69 Aligned_cols=37 Identities=24% Similarity=0.444 Sum_probs=34.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPT 44 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~ 44 (405)
+||+|||||++||++|+.|+++|++|+|+||.+.+..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG 37 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGG 37 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 4899999999999999999999999999999887643
No 64
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.29 E-value=2.6e-10 Score=108.37 Aligned_cols=37 Identities=22% Similarity=0.371 Sum_probs=33.4
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcC-CcEEEEccCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAG-WDVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g-~~v~i~E~~~~ 41 (405)
|+++||+|||||++|+++|+.|+++| .+|+||||...
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~ 58 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHA 58 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSS
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCC
Confidence 45689999999999999999999999 99999999433
No 65
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.29 E-value=2.6e-11 Score=118.67 Aligned_cols=160 Identities=14% Similarity=0.086 Sum_probs=88.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCC-CCcceeeCccHHHHHHHhccCh----------------
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNP-TGAGIALHLLSQKIVKSWLHQP---------------- 69 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~-~~~~~~l~~~~~~~l~~~~~~~---------------- 69 (405)
++||+|||||+||+++|+.|+++|++|+||||.+.....+. .+.++..... ...++++...
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~--~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWT--DQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSC--HHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCC--HHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 58999999999999999999999999999999987643211 1223322211 1122222110
Q ss_pred ---h--------------hhhcccCCccccccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecc
Q 035933 70 ---D--------------LLHNITLPLTIDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGH 130 (405)
Q Consensus 70 ---~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~ 130 (405)
+ .+...+.+.. ......+.. ..+..... + .......+.+.|.+.+. .|+ +++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~--~~~~~~g~~-~~r~~~~~-~---g~~~g~~l~~~L~~~~~~~gv~i~~~~ 276 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLT--DVGMMGGAS-VNRAHRPT-G---GAGVGAHVVQVLYDNAVKRNIDLRMNT 276 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCC--EEECCTTCS-SCCEEEST-T---TCCHHHHHHHHHHHHHHHTTCEEESSE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCc--cCcccCCcC-CCeeEecC-C---CCCCHHHHHHHHHHHHHhcCCEEEeCC
Confidence 0 0000011100 000000000 00000000 0 00233567777777663 588 99999
Q ss_pred eEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcccccc
Q 035933 131 LYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSSVRQ 176 (405)
Q Consensus 131 ~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~vr~ 176 (405)
+|+++..++++..+.|.+. ..+|+...+.+|.||.|+|.+|..+.
T Consensus 277 ~v~~l~~~~~g~v~Gv~~~-~~~g~~~~i~a~~VVlAtGg~~~n~~ 321 (571)
T 1y0p_A 277 RGIEVLKDDKGTVKGILVK-GMYKGYYWVKADAVILATGGFAKNNE 321 (571)
T ss_dssp EEEEEEECTTSCEEEEEEE-ETTTEEEEEECSEEEECCCCCTTCHH
T ss_pred EeeEeEEcCCCeEEEEEEE-eCCCcEEEEECCeEEEeCCCcccCHH
Confidence 9999986432322224432 23676556899999999999987543
No 66
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.28 E-value=4.5e-11 Score=106.74 Aligned_cols=143 Identities=13% Similarity=0.117 Sum_probs=85.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCCCCCCCCCc----ceeeCccHHHHHHHhccChhhhhcccCCcc
Q 035933 7 KPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGPPTGNPTGA----GIALHLLSQKIVKSWLHQPDLLHNITLPLT 80 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~~~~~~~~~----~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (405)
.+||+||||||||+++|+.|++. |++|+|+|+.+.+......+. ...+.+.....|.+++... ...
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~---~~~----- 136 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPY---EDE----- 136 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCC---EEC-----
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCccc---ccC-----
Confidence 46999999999999999999998 999999999887643211111 1122233344444443311 000
Q ss_pred ccccceecCccceeeeecccCCcccccccHHHHHHHHHhcC-C-Cce-EEecceEEEEEEecC-C-C--eE---EEEEee
Q 035933 81 IDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-P-VEI-VFWGHLYLTFCISHD-K-S--TV---NVKAKN 150 (405)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~-~~~-i~~~~~v~~i~~~~~-~-~--~v---~v~~~~ 150 (405)
+ ......+...+...|.+.+ . .++ ++.+++|.++..+++ + + .+ .+....
T Consensus 137 --------g-------------~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~ 195 (326)
T 2gjc_A 137 --------G-------------DYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTL 195 (326)
T ss_dssp --------S-------------SEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHH
T ss_pred --------C-------------CeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEeccee
Confidence 0 0001113356677777765 3 488 999999999987542 1 2 22 222110
Q ss_pred -cCCC------ceeEEee---------------eEEEeecCCcccccccc
Q 035933 151 -LRTD------VIIDVVG---------------DLLVAADGSRSSVRQTF 178 (405)
Q Consensus 151 -~~~g------~~~~~~~---------------d~vV~AdG~~S~vr~~l 178 (405)
..+| +...+.| ++||+|+|+.|++.+.+
T Consensus 196 v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 196 VTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp HHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred ecccccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 0122 3345889 99999999999998876
No 67
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.27 E-value=3.5e-11 Score=108.14 Aligned_cols=38 Identities=16% Similarity=0.283 Sum_probs=32.7
Q ss_pred CCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 3 ERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 3 ~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+.|++|||+||||||||++||+.|++.|++|+|||+..
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~ 39 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT 39 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45788999999999999999999999999999999864
No 68
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.27 E-value=2.8e-11 Score=99.85 Aligned_cols=113 Identities=18% Similarity=0.135 Sum_probs=78.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccccee
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRAV 87 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (405)
+||+||||||+|+.+|..|++.|.+|+|+|+.+.... ... .+.. ++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~-----~~~------------------~~~~--~~--------- 47 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVK-----GVS------------------RVPN--YP--------- 47 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTT-----TCS------------------CCCC--ST---------
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCccc-----Cch------------------hhhc--cC---------
Confidence 6999999999999999999999999999999864211 000 0000 00
Q ss_pred cCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 88 DREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
..+ ..+....+.+.|.+.++ .++ ++++ +|.+++.++ ..+.++ +++| ++++|+||
T Consensus 48 --------------~~~-~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~--~~~~v~---~~~g---~i~ad~vI 103 (180)
T 2ywl_A 48 --------------GLL-DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMG--GVFEVE---TEEG---VEKAERLL 103 (180)
T ss_dssp --------------TCT-TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECS--SSEEEE---CSSC---EEEEEEEE
T ss_pred --------------CCc-CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcC--CEEEEE---ECCC---EEEECEEE
Confidence 000 01234566677777663 577 8888 999998543 346665 5566 38999999
Q ss_pred eecCCcccccccc
Q 035933 166 AADGSRSSVRQTF 178 (405)
Q Consensus 166 ~AdG~~S~vr~~l 178 (405)
.|+|..+.+++.+
T Consensus 104 ~A~G~~~~~~~~~ 116 (180)
T 2ywl_A 104 LCTHKDPTLPSLL 116 (180)
T ss_dssp ECCTTCCHHHHHH
T ss_pred ECCCCCCCccccC
Confidence 9999998775554
No 69
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.25 E-value=2e-11 Score=113.08 Aligned_cols=36 Identities=25% Similarity=0.361 Sum_probs=33.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
++||+|||||++|+++|+.|+++|++|+|+|+....
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 479999999999999999999999999999998765
No 70
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.24 E-value=3.1e-11 Score=109.80 Aligned_cols=122 Identities=12% Similarity=0.136 Sum_probs=81.3
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcc
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLT 80 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~ 80 (405)
|+..++.+||+||||||||+++|+.|+++|++|+|||+.+.+ |..+ ..... ...+. ..
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~------gG~~----------~~~~~-~~~~~--~~--- 58 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQL------GGQL----------SALYP-EKYIY--DV--- 58 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS------CHHH----------HHHCT-TSEEC--CS---
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCC------Ccee----------hhcCC-CceEe--cc---
Confidence 443334589999999999999999999999999999998763 2111 00000 00000 00
Q ss_pred ccccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeE
Q 035933 81 IDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIID 158 (405)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~ 158 (405)
..+..+.+..+...|.+.+. .++ ++++++|.++....+ ..+.|+ +.+|+
T Consensus 59 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~~~v~---~~~g~--- 109 (332)
T 3lzw_A 59 ----------------------AGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQAD-GVFKLV---TNEET--- 109 (332)
T ss_dssp ----------------------TTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTT-SCEEEE---ESSEE---
T ss_pred ----------------------CCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCC-CcEEEE---ECCCE---
Confidence 00011345677777777664 467 889999999985433 356666 45554
Q ss_pred EeeeEEEeecCCccc
Q 035933 159 VVGDLLVAADGSRSS 173 (405)
Q Consensus 159 ~~~d~vV~AdG~~S~ 173 (405)
+.+|.||.|+|..|.
T Consensus 110 ~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 110 HYSKTVIITAGNGAF 124 (332)
T ss_dssp EEEEEEEECCTTSCC
T ss_pred EEeCEEEECCCCCcC
Confidence 899999999999653
No 71
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.23 E-value=6.2e-11 Score=114.97 Aligned_cols=154 Identities=13% Similarity=0.080 Sum_probs=87.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC-CCCCCCCCcceee-Cc-cHHHHHHHhccChhh-hhcccCCccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG-PPTGNPTGAGIAL-HL-LSQKIVKSWLHQPDL-LHNITLPLTI 81 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~-~~~~~~~~~~~~l-~~-~~~~~l~~~~~~~~~-~~~~~~~~~~ 81 (405)
..+||+|||||+||+.+|+.|++.|.+|+|+|+... ... ..+...... .. ...+.++.++..... .+..+..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~-~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~--- 102 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ-MSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQ--- 102 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC-CSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEE---
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccc-ccccccccchhhHHHHHHHHHhccHHHHHhhhcccc---
Confidence 358999999999999999999999999999999742 221 111111111 10 112223333221100 0100000
Q ss_pred cccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC--Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeE
Q 035933 82 DQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP--VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIID 158 (405)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~ 158 (405)
+...+... ......+...+++..+...|.+.+. .++ + ++++|.++..++ +..+.|. +.+|..
T Consensus 103 --f~~l~~~k------gpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~-g~V~GV~---t~dG~~-- 167 (651)
T 3ces_A 103 --FRILNASK------GPAVRATRAQADRVLYRQAVRTALENQPNLMI-FQQAVEDLIVEN-DRVVGAV---TQMGLK-- 167 (651)
T ss_dssp --EEEESTTS------CGGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEESS-SBEEEEE---ETTSEE--
T ss_pred --hhhhhccc------CcccccchhhCCHHHHHHHHHHHHHhCCCCEE-EEEEEEEEEecC-CEEEEEE---ECCCCE--
Confidence 00000000 0000011134677888888888774 478 6 678999987532 2223444 456754
Q ss_pred EeeeEEEeecCCcccccccc
Q 035933 159 VVGDLLVAADGSRSSVRQTF 178 (405)
Q Consensus 159 ~~~d~vV~AdG~~S~vr~~l 178 (405)
+.||.||+|+|.+|..+...
T Consensus 168 I~Ad~VVLATGt~s~~~~i~ 187 (651)
T 3ces_A 168 FRAKAVVLTVGTFLDGKIHI 187 (651)
T ss_dssp EEEEEEEECCSTTTCCEEEC
T ss_pred EECCEEEEcCCCCccCcccc
Confidence 89999999999999876543
No 72
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.23 E-value=2e-11 Score=111.24 Aligned_cols=124 Identities=13% Similarity=0.094 Sum_probs=76.0
Q ss_pred CCCC-CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCc
Q 035933 1 MRER-MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPL 79 (405)
Q Consensus 1 m~~~-~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (405)
|..| |+.+||+||||||||+++|+.|++.|++|+|||+...... ..+..+.... ... ..+
T Consensus 1 M~~~~~~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~--~~gg~~~~~~--------------~~~--~~~- 61 (333)
T 1vdc_A 1 MNGLETHNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDI--APGGQLTTTT--------------DVE--NFP- 61 (333)
T ss_dssp ---CEEEEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB--CTTCGGGGCS--------------EEC--CST-
T ss_pred CCCCCCCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCcccc--CCCceeeecc--------------ccc--cCC-
Confidence 4443 4568999999999999999999999999999998311100 0111110000 000 000
Q ss_pred cccccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCcee
Q 035933 80 TIDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVII 157 (405)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~ 157 (405)
.++ ..+.+..+...|.+.+. .++ +++++ |.+++ .+...++|+ + +|..
T Consensus 62 ----------------------~~~-~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~--~~~~~~~v~---~-~~~~- 110 (333)
T 1vdc_A 62 ----------------------GFP-EGILGVELTDKFRKQSERFGTTIFTET-VTKVD--FSSKPFKLF---T-DSKA- 110 (333)
T ss_dssp ----------------------TCT-TCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEE--CSSSSEEEE---C-SSEE-
T ss_pred ----------------------CCc-cCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEE--EcCCEEEEE---E-CCcE-
Confidence 000 01345666677766553 467 77776 88887 344456666 4 5544
Q ss_pred EEeeeEEEeecCCccccc
Q 035933 158 DVVGDLLVAADGSRSSVR 175 (405)
Q Consensus 158 ~~~~d~vV~AdG~~S~vr 175 (405)
+++|.||.|+|.++...
T Consensus 111 -~~~~~vv~A~G~~~~~~ 127 (333)
T 1vdc_A 111 -ILADAVILAIGAVAKRL 127 (333)
T ss_dssp -EEEEEEEECCCEEECCC
T ss_pred -EEcCEEEECCCCCcCCC
Confidence 89999999999987543
No 73
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.22 E-value=5.7e-11 Score=116.12 Aligned_cols=42 Identities=21% Similarity=0.334 Sum_probs=37.1
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
|...+.++||+|||||+||+++|+.|++.|.+|+|+||.+..
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 554445689999999999999999999999999999998764
No 74
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.22 E-value=7.8e-11 Score=105.36 Aligned_cols=111 Identities=15% Similarity=0.067 Sum_probs=74.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccccee
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRAV 87 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (405)
+||+||||||||+++|..|+++|++|+|||+.+.. +. + . . . ...++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~------~~-~--~-----------~---~--~~~~~--------- 48 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERR------NR-F--A-----------S---H--SHGFL--------- 48 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCG------GG-G--C-----------S---C--CCSST---------
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcc------cc-c--c-----------h---h--hcCCc---------
Confidence 79999999999999999999999999999997531 10 0 0 0 0 00000
Q ss_pred cCccceeeeecccCCcccccccHHHHHHHHHhcCCC--ceEEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 88 DREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPV--EIVFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
.........+...+.+.+.. ++.+...+|.++..++ ..+.++ +.+|+. +.+|.||
T Consensus 49 ----------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~--~~~~v~---~~~g~~--~~~d~vv 105 (297)
T 3fbs_A 49 ----------------GQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSF--GEFIVE---IDGGRR--ETAGRLI 105 (297)
T ss_dssp ----------------TCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEET--TEEEEE---ETTSCE--EEEEEEE
T ss_pred ----------------CCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcC--CeEEEE---ECCCCE--EEcCEEE
Confidence 00113346666777776643 5633456899998543 356666 567765 8999999
Q ss_pred eecCCccccc
Q 035933 166 AADGSRSSVR 175 (405)
Q Consensus 166 ~AdG~~S~vr 175 (405)
.|+|..+...
T Consensus 106 iAtG~~~~~~ 115 (297)
T 3fbs_A 106 LAMGVTDELP 115 (297)
T ss_dssp ECCCCEEECC
T ss_pred ECCCCCCCCC
Confidence 9999976543
No 75
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.21 E-value=1.2e-11 Score=115.79 Aligned_cols=36 Identities=22% Similarity=0.401 Sum_probs=33.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~ 42 (405)
.+||+|||||++|+++|+.|+++ |++|+|||+....
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 37999999999999999999999 9999999998654
No 76
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.20 E-value=1.5e-10 Score=111.60 Aligned_cols=37 Identities=32% Similarity=0.487 Sum_probs=34.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
++||+|||||+||+++|+.|+++|.+|+|+||.+.+.
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~G 77 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWG 77 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCC
Confidence 4899999999999999999999999999999998764
No 77
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.20 E-value=9.6e-11 Score=113.19 Aligned_cols=152 Identities=11% Similarity=0.095 Sum_probs=87.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC-CCCCCCCCCccee-eC-ccHHHHHHHhccCh-hhhhcccCCcccc
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR-GPPTGNPTGAGIA-LH-LLSQKIVKSWLHQP-DLLHNITLPLTID 82 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~-~~~~~~~~~~~~~-l~-~~~~~~l~~~~~~~-~~~~~~~~~~~~~ 82 (405)
.+||+|||||+||+.+|+.|++.|.+|+|+|++. .....+ +..... +. ....+.++.++... ...+..+...
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~-Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f--- 102 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMS-CNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF--- 102 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCC-SCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE---
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcC-ccccccccchHHHHHHHHHhhhHHHHHhhhcccce---
Confidence 5899999999999999999999999999999974 222111 111111 11 11223333333211 1111111100
Q ss_pred ccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC--Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEE
Q 035933 83 QNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP--VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDV 159 (405)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~ 159 (405)
...+... . .........++|..+.+.|.+.+. .++ + ++.+|.++..++ +..+.|. +.+|.. +
T Consensus 103 --~~l~~~k--G----pav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~-g~V~GV~---t~dG~~--i 167 (637)
T 2zxi_A 103 --KMLNTRK--G----KAVQSPRAQADKKRYREYMKKVCENQENLYI-KQEEVVDIIVKN-NQVVGVR---TNLGVE--Y 167 (637)
T ss_dssp --EEESTTS--C----GGGCEEEEEECHHHHHHHHHHHHHTCTTEEE-EESCEEEEEESS-SBEEEEE---ETTSCE--E
T ss_pred --eeccccc--C----ccccchhhhCCHHHHHHHHHHHHHhCCCCEE-EEeEEEEEEecC-CEEEEEE---ECCCcE--E
Confidence 0000000 0 000011124677888888888774 478 7 678999987532 2222344 557754 8
Q ss_pred eeeEEEeecCCccccccc
Q 035933 160 VGDLLVAADGSRSSVRQT 177 (405)
Q Consensus 160 ~~d~vV~AdG~~S~vr~~ 177 (405)
.||.||.|+|.++..+..
T Consensus 168 ~AdaVVLATG~~s~~~~~ 185 (637)
T 2zxi_A 168 KTKAVVVTTGTFLNGVIY 185 (637)
T ss_dssp ECSEEEECCTTCBTCEEE
T ss_pred EeCEEEEccCCCccCcee
Confidence 999999999999876544
No 78
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.19 E-value=3.3e-11 Score=116.64 Aligned_cols=36 Identities=28% Similarity=0.326 Sum_probs=33.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
++||+|||||+||+++|+.|++ |.+|+|+||.+...
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~ 43 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTE 43 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCC
Confidence 5899999999999999999999 99999999998653
No 79
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.19 E-value=8.7e-11 Score=106.62 Aligned_cols=121 Identities=17% Similarity=0.116 Sum_probs=75.4
Q ss_pred CCCC-CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCc
Q 035933 1 MRER-MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPL 79 (405)
Q Consensus 1 m~~~-~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~ 79 (405)
|... ++.+||+||||||||+++|+.|++.|++|+|||+. .+ |..+.... .+. .++
T Consensus 1 m~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~------gg~~~~~~--------------~~~--~~~- 56 (325)
T 2q7v_A 1 MTAPTAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MP------GGQIAWSE--------------EVE--NFP- 56 (325)
T ss_dssp -CCCCCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CT------TGGGGGCS--------------CBC--CST-
T ss_pred CCCCccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CC------Cccccccc--------------ccc--cCC-
Confidence 4442 34589999999999999999999999999999998 32 21111000 000 000
Q ss_pred cccccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEec-CCCeEEEEEeecCCCce
Q 035933 80 TIDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISH-DKSTVNVKAKNLRTDVI 156 (405)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~-~~~~v~v~~~~~~~g~~ 156 (405)
.++ ..+.+..+.+.|.+.+. .++ +++ .+|.++.... ++..++|. ..+|..
T Consensus 57 ----------------------~~~-~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~---~~~g~~ 109 (325)
T 2q7v_A 57 ----------------------GFP-EPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTV---RGYNGE 109 (325)
T ss_dssp ----------------------TCS-SCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEE---EESSCE
T ss_pred ----------------------CCC-CCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEE---ECCCCE
Confidence 000 01344566666666553 466 665 5888887542 22125554 346654
Q ss_pred eEEeeeEEEeecCCcccc
Q 035933 157 IDVVGDLLVAADGSRSSV 174 (405)
Q Consensus 157 ~~~~~d~vV~AdG~~S~v 174 (405)
+.+|.||.|+|..+..
T Consensus 110 --~~~~~vv~AtG~~~~~ 125 (325)
T 2q7v_A 110 --YRAKAVILATGADPRK 125 (325)
T ss_dssp --EEEEEEEECCCEEECC
T ss_pred --EEeCEEEECcCCCcCC
Confidence 8999999999987643
No 80
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.19 E-value=1e-10 Score=113.43 Aligned_cols=150 Identities=15% Similarity=0.124 Sum_probs=85.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC-CCCCCCCCcceeeCccHHHHHHHh---ccCh-hhhhcccCCcc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG-PPTGNPTGAGIALHLLSQKIVKSW---LHQP-DLLHNITLPLT 80 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~-~~~~~~~~~~~~l~~~~~~~l~~~---~~~~-~~~~~~~~~~~ 80 (405)
..+||+|||||+||+.+|+.|++.|.+|+|+|+... ... ..+....... ....+++.+ +... ......+...
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~-~~c~ps~gGi-a~~~lv~el~al~g~~~~~~d~~gi~f- 96 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVAR-MSCNPAIGGV-AKGQITREIDALGGEMGKAIDATGIQF- 96 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTC-CSSCSEEECH-HHHHHHHHHHHHTCSHHHHHHHHEEEE-
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCC-Cccccchhhh-hHHHHHHHHHhcccHHHHHHHhcCCch-
Confidence 468999999999999999999999999999999852 211 1111111100 112233322 2111 0111111100
Q ss_pred ccccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC--Cce-EEecceEEEEEEecCCCeEE-EEEeecCCCce
Q 035933 81 IDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP--VEI-VFWGHLYLTFCISHDKSTVN-VKAKNLRTDVI 156 (405)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~--~~~-i~~~~~v~~i~~~~~~~~v~-v~~~~~~~g~~ 156 (405)
...+... ......+...++|..+...|.+.+. .++ + ++..|.++..++ +.+. |. +.+|..
T Consensus 97 ----~~l~~~k------gpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I-~~~~V~~L~~d~--g~V~GV~---t~~G~~ 160 (641)
T 3cp8_A 97 ----RMLNRSK------GPAMHSPRAQADKTQYSLYMRRIVEHEPNIDL-LQDTVIGVSANS--GKFSSVT---VRSGRA 160 (641)
T ss_dssp ----EEECSSS------CTTTCEEEEEECHHHHHHHHHHHHHTCTTEEE-EECCEEEEEEET--TEEEEEE---ETTSCE
T ss_pred ----hhccccc------CccccchhhhcCHHHHHHHHHHHHHhCCCCEE-EeeEEEEEEecC--CEEEEEE---ECCCcE
Confidence 0000000 0000111235788888888888774 478 6 466898887533 3443 44 557764
Q ss_pred eEEeeeEEEeecCCcccccc
Q 035933 157 IDVVGDLLVAADGSRSSVRQ 176 (405)
Q Consensus 157 ~~~~~d~vV~AdG~~S~vr~ 176 (405)
+.||.||+|+|.++..+-
T Consensus 161 --i~Ad~VVLATG~~s~~~i 178 (641)
T 3cp8_A 161 --IQAKAAILACGTFLNGLI 178 (641)
T ss_dssp --EEEEEEEECCTTCBTCEE
T ss_pred --EEeCEEEECcCCCCCccc
Confidence 899999999999876543
No 81
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.18 E-value=1.4e-10 Score=104.95 Aligned_cols=111 Identities=17% Similarity=0.164 Sum_probs=73.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
++||+||||||||+++|+.|+++|++|+|||+. + |..+... . ... ..+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~------gg~~~~~-------------~-~~~--~~~-------- 62 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--P------GGQLTEA-------------G-IVD--DYL-------- 62 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--T------TGGGGGC-------------C-EEC--CST--------
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--C------CCeeccc-------------c-ccc--ccC--------
Confidence 479999999999999999999999999999997 2 1111100 0 000 000
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
.. ..+....+.+.|.+.+ ..++ +++ ++|.++..+ ...+.++ +.+|.. +.+|.|
T Consensus 63 ---------------~~--~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~--~~~~~v~---~~~g~~--~~~d~l 117 (323)
T 3f8d_A 63 ---------------GL--IEIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENR--GDEFVVK---TKRKGE--FKADSV 117 (323)
T ss_dssp ---------------TS--TTEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC----CEEEE---ESSSCE--EEEEEE
T ss_pred ---------------CC--CCCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEec--CCEEEEE---ECCCCE--EEcCEE
Confidence 00 0134456666666655 3467 777 889998853 3456665 556664 899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|+|.....
T Consensus 118 vlAtG~~~~~ 127 (323)
T 3f8d_A 118 ILGIGVKRRK 127 (323)
T ss_dssp EECCCCEECC
T ss_pred EECcCCCCcc
Confidence 9999998543
No 82
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.17 E-value=2.6e-09 Score=102.19 Aligned_cols=63 Identities=17% Similarity=0.197 Sum_probs=46.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcC--CcEEEEccCCCCCCCC----CCC------c--ceeeCccHHHHHHHhccC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAG--WDVVVIEKTRGPPTGN----PTG------A--GIALHLLSQKIVKSWLHQ 68 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g--~~v~i~E~~~~~~~~~----~~~------~--~~~l~~~~~~~l~~~~~~ 68 (405)
+++||+|||||++|+++|+.|++.| ++|+|+|+++.+.... ..| . -....+...++++++++.
T Consensus 3 ~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~l~~~lg~~ 79 (475)
T 3lov_A 3 SSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVATYREDGFTIERGPDSYVARKHILTDLIEAIGLG 79 (475)
T ss_dssp CSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCEECSTTCCEESSCCCEETTSTHHHHHHHHTTCG
T ss_pred CcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEEEeeCCEEEecCchhhhcccHHHHHHHHHcCCc
Confidence 3589999999999999999999999 9999999987653211 001 1 012244567888888764
No 83
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.17 E-value=1.2e-10 Score=114.05 Aligned_cols=67 Identities=16% Similarity=0.232 Sum_probs=47.4
Q ss_pred HHHHHHHHhcC-CCc-e-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcccccccc
Q 035933 111 TDLHGLIYNTL-PVE-I-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSSVRQTF 178 (405)
Q Consensus 111 ~~l~~~L~~~~-~~~-~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~vr~~l 178 (405)
..+.+.|.+.+ +.+ + +++++.|.++..++ +.-+.|...+..+|+...+.++.||.|+|.+|.++...
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~ 203 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD-GHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYN 203 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET-TEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSB
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCc
Confidence 46677777766 356 8 99999999998643 22122333334678765689999999999999986543
No 84
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.17 E-value=1.5e-10 Score=104.73 Aligned_cols=113 Identities=17% Similarity=0.164 Sum_probs=72.9
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
++.+||+||||||||+++|+.|++.|++|+|||+... |..+.... .+. .++
T Consensus 14 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-------gg~~~~~~--------------~~~--~~~------ 64 (319)
T 3cty_A 14 ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVA-------GGLTAEAP--------------LVE--NYL------ 64 (319)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSST-------TGGGGGCS--------------CBC--CBT------
T ss_pred cCCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC-------Cccccccc--------------hhh--hcC------
Confidence 3458999999999999999999999999999999421 21111000 000 000
Q ss_pred ceecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeee
Q 035933 85 RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d 162 (405)
.+ ..+.+..+...|.+.+ +.++ +++ .+|.+++... ..++|. . ++.. +.+|
T Consensus 65 -----------------~~--~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~---~-~~~~--~~~~ 116 (319)
T 3cty_A 65 -----------------GF--KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQ--GGFDIE---T-NDDT--YHAK 116 (319)
T ss_dssp -----------------TB--SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEET--TEEEEE---E-SSSE--EEEE
T ss_pred -----------------CC--cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeC--CEEEEE---E-CCCE--EEeC
Confidence 00 0133455666666655 3477 766 6888887533 356555 3 4443 8999
Q ss_pred EEEeecCCcccc
Q 035933 163 LLVAADGSRSSV 174 (405)
Q Consensus 163 ~vV~AdG~~S~v 174 (405)
.||.|+|..+..
T Consensus 117 ~li~AtG~~~~~ 128 (319)
T 3cty_A 117 YVIITTGTTHKH 128 (319)
T ss_dssp EEEECCCEEECC
T ss_pred EEEECCCCCccc
Confidence 999999987643
No 85
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.17 E-value=1.1e-10 Score=106.45 Aligned_cols=122 Identities=13% Similarity=0.074 Sum_probs=77.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
+.+||+||||||||+++|+.|+++|++|+|||+.+.... ..|..+.... . ...++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~--~~gg~~~~~~--------------~--~~~~~------- 75 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGI--AAGGQLTTTT--------------E--IENFP------- 75 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTB--CTTCGGGGSS--------------E--ECCST-------
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCC--CcCcccccch--------------h--hcccC-------
Confidence 358999999999999999999999999999999762111 0121110000 0 00000
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeE
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 163 (405)
.++. .+.+..+...|.+.+. .++ +++++ |.++. .+...+.+......++.. +.+|.
T Consensus 76 ----------------~~~~-~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~--~~~~~~~v~~~~~~~~~~--~~~d~ 133 (338)
T 3itj_A 76 ----------------GFPD-GLTGSELMDRMREQSTKFGTEIITET-VSKVD--LSSKPFKLWTEFNEDAEP--VTTDA 133 (338)
T ss_dssp ----------------TCTT-CEEHHHHHHHHHHHHHHTTCEEECSC-EEEEE--CSSSSEEEEETTCSSSCC--EEEEE
T ss_pred ----------------CCcc-cCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEE--EcCCEEEEEEEecCCCcE--EEeCE
Confidence 0000 1344666677766663 477 88888 88887 445567665221134444 89999
Q ss_pred EEeecCCcccc
Q 035933 164 LVAADGSRSSV 174 (405)
Q Consensus 164 vV~AdG~~S~v 174 (405)
||.|+|..+..
T Consensus 134 vvlAtG~~~~~ 144 (338)
T 3itj_A 134 IILATGASAKR 144 (338)
T ss_dssp EEECCCEEECC
T ss_pred EEECcCCCcCC
Confidence 99999997644
No 86
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.16 E-value=2e-10 Score=103.45 Aligned_cols=113 Identities=15% Similarity=0.105 Sum_probs=75.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 8 PKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
+||+||||||||+++|+.|++.|+ +|+|||+... |..+.... .+. ..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~-------gg~~~~~~--------------~~~--~~~-------- 50 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMP-------GGQITGSS--------------EIE--NYP-------- 50 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSST-------TCGGGGCS--------------CBC--CST--------
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCC-------Cccccccc--------------ccc--cCC--------
Confidence 699999999999999999999999 9999999521 21111000 000 000
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+ ..+++..+.+.|.+.+ +.++ +++ .+|.++..+. ..+++. +.+|+. +.+|.|
T Consensus 51 ---------------~~~-~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~--~~~~v~---~~~g~~--~~~~~v 106 (311)
T 2q0l_A 51 ---------------GVK-EVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKD--SHFVIL---AEDGKT--FEAKSV 106 (311)
T ss_dssp ---------------TCC-SCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEET--TEEEEE---ETTSCE--EEEEEE
T ss_pred ---------------CCc-ccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcC--CEEEEE---EcCCCE--EECCEE
Confidence 000 1245567777776655 3467 766 7898887543 356665 456654 899999
Q ss_pred EeecCCccccc
Q 035933 165 VAADGSRSSVR 175 (405)
Q Consensus 165 V~AdG~~S~vr 175 (405)
|.|+|..+...
T Consensus 107 v~AtG~~~~~~ 117 (311)
T 2q0l_A 107 IIATGGSPKRT 117 (311)
T ss_dssp EECCCEEECCC
T ss_pred EECCCCCCCCC
Confidence 99999877554
No 87
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.15 E-value=2.6e-10 Score=111.40 Aligned_cols=163 Identities=14% Similarity=0.118 Sum_probs=87.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCC-CCcceeeCc-----------cHHHHHHHh---ccC---
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNP-TGAGIALHL-----------LSQKIVKSW---LHQ--- 68 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~-~~~~~~l~~-----------~~~~~l~~~---~~~--- 68 (405)
.+||+|||||+||+++|+.|++.|++|+|+||.+.+..... .+.++.... .....+..+ +..
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 47999999999999999999999999999999987643211 111221110 001111111 100
Q ss_pred hh--------------hhhcccCCccccccceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceE
Q 035933 69 PD--------------LLHNITLPLTIDQNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLY 132 (405)
Q Consensus 69 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v 132 (405)
.+ .+...+.+... .....+.. ..+..... ........+.+.|.+.+. .|+ ++++++|
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~--~~~~gg~~-~~r~~~~~----~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v 278 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTD--VGRMGGAS-VNRSHRPT----GGAGVGAHVAQVLWDNAVKRGTDIRLNSRV 278 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCE--EECCTTCS-SCCEEEST----TTCCHHHHHHHHHHHHHHHTTCEEESSEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCcccc--ccccCCCc-CCeeEecC----CCCCCHHHHHHHHHHHHHHcCCeEEecCEE
Confidence 00 00111111100 00000000 00000000 001224567777777663 588 9999999
Q ss_pred EEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCccccccc
Q 035933 133 LTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSSVRQT 177 (405)
Q Consensus 133 ~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~vr~~ 177 (405)
+++..++++..+.|.+. ..+|+...+.+|.||.|+|..|..+++
T Consensus 279 ~~l~~~~~g~v~GV~~~-~~~G~~~~i~A~~VVlAtGg~~~~~~~ 322 (572)
T 1d4d_A 279 VRILEDASGKVTGVLVK-GEYTGYYVIKADAVVIAAGGFAKNNER 322 (572)
T ss_dssp EEEEEC--CCEEEEEEE-ETTTEEEEEECSEEEECCCCCTTCHHH
T ss_pred EEEEECCCCeEEEEEEE-eCCCcEEEEEcCEEEEeCCCCccCHHH
Confidence 99975431332234432 236765568999999999999875443
No 88
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.14 E-value=1.5e-09 Score=100.14 Aligned_cols=38 Identities=18% Similarity=0.427 Sum_probs=34.5
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.+++||+|||||++|+++|+.|+++|++|+|+||....
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~ 41 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPE 41 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCC
Confidence 34689999999999999999999999999999998643
No 89
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.14 E-value=1.4e-10 Score=107.16 Aligned_cols=138 Identities=17% Similarity=0.138 Sum_probs=77.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
+++||+||||||||+++|+.|++.|+ +|+|||+.+ + |..+...+... .+............
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~------Gg~~~~~~~~~-----------~~~~~~~~~~~~g~ 64 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-V------GHSFKHWPKST-----------RTITPSFTSNGFGM 64 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-T------THHHHTSCTTC-----------BCSSCCCCCGGGTC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-C------CCccccCcccc-----------cccCcchhcccCCc
Confidence 35899999999999999999999999 999999986 2 11110000000 00000000000000
Q ss_pred -ceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEee
Q 035933 85 -RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVG 161 (405)
Q Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~ 161 (405)
............+ ......+.+..+.+.|.+.+. .++ ++++++|.++..++ ..++|. ..++ . +.+
T Consensus 65 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~~~v~---~~~g-~--~~~ 132 (369)
T 3d1c_A 65 PDMNAISMDTSPAF----TFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADD--AYYTIA---TTTE-T--YHA 132 (369)
T ss_dssp CCTTCSSTTCCHHH----HHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSEEEE---ESSC-C--EEE
T ss_pred hhhhhccccccccc----cccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECC--CeEEEE---eCCC-E--EEe
Confidence 0000000000000 000112455667777766553 477 88999999998543 356665 4455 3 789
Q ss_pred eEEEeecCCccc
Q 035933 162 DLLVAADGSRSS 173 (405)
Q Consensus 162 d~vV~AdG~~S~ 173 (405)
|.||.|+|..+.
T Consensus 133 d~vVlAtG~~~~ 144 (369)
T 3d1c_A 133 DYIFVATGDYNF 144 (369)
T ss_dssp EEEEECCCSTTS
T ss_pred CEEEECCCCCCc
Confidence 999999999764
No 90
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.14 E-value=5.9e-09 Score=98.17 Aligned_cols=36 Identities=28% Similarity=0.421 Sum_probs=33.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
+||+|||||++||++|+.|+++|++|+|+|+++.+.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~G 36 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITG 36 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCC
Confidence 489999999999999999999999999999998764
No 91
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.12 E-value=3.4e-10 Score=101.90 Aligned_cols=114 Identities=13% Similarity=0.118 Sum_probs=75.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
++||+||||||||+++|+.|++.|++|+|+|++. |..+ .. ..+. + ..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~--------gG~~-~~--------~~~~----------~------~~ 47 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF--------GGQI-LD--------TVDI----------E------NY 47 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST--------TGGG-GG--------CCEE----------C------CB
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC--------Ccee-cc--------cccc----------c------cc
Confidence 3799999999999999999999999999998642 1111 00 0000 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecC-CCeEEEEEeecCCCceeEEeeeE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHD-KSTVNVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~-~~~v~v~~~~~~~g~~~~~~~d~ 163 (405)
. ......+..+.+.|.+.+ ..++ ++++++|..+..+.+ +..+++. +++|.. +.+|.
T Consensus 48 ~----------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~---~~~g~~--~~~~~ 106 (310)
T 1fl2_A 48 I----------------SVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIE---TASGAV--LKARS 106 (310)
T ss_dssp T----------------TBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEE---ETTSCE--EEEEE
T ss_pred c----------------CcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEE---ECCCCE--EEeCE
Confidence 0 000123456666666655 3577 889999999874332 2356666 556754 89999
Q ss_pred EEeecCCcccc
Q 035933 164 LVAADGSRSSV 174 (405)
Q Consensus 164 vV~AdG~~S~v 174 (405)
||.|+|..+..
T Consensus 107 lv~AtG~~~~~ 117 (310)
T 1fl2_A 107 IIVATGAKWRN 117 (310)
T ss_dssp EEECCCEEECC
T ss_pred EEECcCCCcCC
Confidence 99999987643
No 92
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.12 E-value=4.4e-10 Score=110.04 Aligned_cols=63 Identities=16% Similarity=0.127 Sum_probs=44.9
Q ss_pred HHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcccc
Q 035933 111 TDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSSV 174 (405)
Q Consensus 111 ~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~v 174 (405)
..+.+.|.+.+ +.++ +++++.|.++..++ +.-..|.+.+..+|+...+.|+.||.|+|..+.+
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMEN-GECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEET-TEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEEC-CEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 35667777765 4688 99999999997542 2222233333457776678999999999999875
No 93
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.11 E-value=7e-09 Score=101.13 Aligned_cols=37 Identities=24% Similarity=0.327 Sum_probs=34.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
..+||+|||||++|+++|+.|+++|++|+|+||.+..
T Consensus 31 ~~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~ 67 (571)
T 2rgh_A 31 EELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFA 67 (571)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3589999999999999999999999999999998644
No 94
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.11 E-value=7.5e-09 Score=100.14 Aligned_cols=38 Identities=37% Similarity=0.551 Sum_probs=35.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
+.+||+|||||+|||++|..|++.|++|+|+|+++.+.
T Consensus 3 ~~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~G 40 (520)
T 1s3e_A 3 NKCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVG 40 (520)
T ss_dssp CBCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 45799999999999999999999999999999998763
No 95
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.11 E-value=2.8e-10 Score=103.75 Aligned_cols=114 Identities=13% Similarity=0.091 Sum_probs=73.0
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
++.+||+||||||||+++|+.|++.|++|+|||+... |..+.... ... ..+
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~-------gg~~~~~~--------------~~~--~~~------ 62 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSF-------GGALMTTT--------------DVE--NYP------ 62 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSC-------SCGGGSCS--------------CBC--CST------
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCC-------CCceeccc--------------hhh--hcC------
Confidence 4568999999999999999999999999999997521 21111000 000 000
Q ss_pred ceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEE-EEeecCCCceeEEee
Q 035933 85 RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNV-KAKNLRTDVIIDVVG 161 (405)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v-~~~~~~~g~~~~~~~ 161 (405)
.++ ..+.+..+...|.+.+. .++ +++++ +.+++. ...++| . +.+|.. +.+
T Consensus 63 -----------------~~~-~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~---~~~~~v~~---~~~g~~--~~~ 115 (335)
T 2a87_A 63 -----------------GFR-NGITGPELMDEMREQALRFGADLRMED-VESVSL---HGPLKSVV---TADGQT--HRA 115 (335)
T ss_dssp -----------------TCT-TCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC---SSSSEEEE---ETTSCE--EEE
T ss_pred -----------------CCC-CCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe---CCcEEEEE---eCCCCE--EEe
Confidence 000 01334556666655553 467 77776 888874 334555 4 456654 899
Q ss_pred eEEEeecCCcccc
Q 035933 162 DLLVAADGSRSSV 174 (405)
Q Consensus 162 d~vV~AdG~~S~v 174 (405)
|.||.|+|..+..
T Consensus 116 d~lviAtG~~~~~ 128 (335)
T 2a87_A 116 RAVILAMGAAARY 128 (335)
T ss_dssp EEEEECCCEEECC
T ss_pred CEEEECCCCCccC
Confidence 9999999987643
No 96
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.10 E-value=3.2e-10 Score=111.72 Aligned_cols=37 Identities=14% Similarity=0.224 Sum_probs=34.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc------CCcEEEEccCCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILA------GWDVVVIEKTRGPP 43 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~------g~~v~i~E~~~~~~ 43 (405)
++||+|||||+|||++|+.|++. |.+|+|+||....+
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~~ 64 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLER 64 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCCC
Confidence 58999999999999999999998 99999999987644
No 97
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.09 E-value=4.9e-10 Score=102.44 Aligned_cols=35 Identities=26% Similarity=0.408 Sum_probs=32.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---cCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALIL---AGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~---~g~~v~i~E~~~~~ 42 (405)
+||+|||||++|+++|+.|++ .|++|+||||...+
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~ 39 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDS 39 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCC
Confidence 599999999999999999999 99999999998754
No 98
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.09 E-value=2.2e-08 Score=94.40 Aligned_cols=35 Identities=34% Similarity=0.529 Sum_probs=33.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
+||+|||||++|+++|+.|++.|++|+|||+++.+
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~ 36 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERL 36 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCc
Confidence 69999999999999999999999999999998765
No 99
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.07 E-value=2.5e-09 Score=102.35 Aligned_cols=37 Identities=24% Similarity=0.423 Sum_probs=34.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCCCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGW--DVVVIEKTRGPPT 44 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~~~~~ 44 (405)
+||+|||||++||++|+.|+++|. +|+|||+++.+..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG 41 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGG 41 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBT
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC
Confidence 699999999999999999999999 9999999876543
No 100
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.07 E-value=4.1e-11 Score=114.38 Aligned_cols=152 Identities=14% Similarity=0.073 Sum_probs=82.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC-----CcEEEEccCCCCCCCCCCCcceeeCccHH--HHHHHhccChhhhhcccCCc
Q 035933 7 KPKAIIVGGSIAGISCAKALILAG-----WDVVVIEKTRGPPTGNPTGAGIALHLLSQ--KIVKSWLHQPDLLHNITLPL 79 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g-----~~v~i~E~~~~~~~~~~~~~~~~l~~~~~--~~l~~~~~~~~~~~~~~~~~ 79 (405)
.+||+||||||||+++|..|++.| ++|+|||+.+..... .+..+....+ ..++.+ .....+.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~----~~~~~~~~~~~~~~~~~l-------~~~~~p~ 98 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWH----GNTLVSQSELQISFLKDL-------VSLRNPT 98 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSS----GGGCCSSCBCSSCTTSSS-------STTTCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCc----CCCCCCCCcCCcchhhcc-------ccccCCC
Confidence 359999999999999999999999 999999999875311 0100000000 000000 0000000
Q ss_pred cccccc-eecCccceeeeecccCCcccccccHHHHHHHHHhcCCC-ce-EEecceEEEEEEecC-CCe--EEEEEeecCC
Q 035933 80 TIDQNR-AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPV-EI-VFWGHLYLTFCISHD-KST--VNVKAKNLRT 153 (405)
Q Consensus 80 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~i~~~~~-~~~--v~v~~~~~~~ 153 (405)
....+. +..... . ...........+.|..+.++|...+.. ++ ++++++|.+++..++ +.. ++|+..+. +
T Consensus 99 ~~~~~~~~l~~~~---~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g-~ 173 (463)
T 3s5w_A 99 SPYSFVNYLHKHD---R-LVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNA-D 173 (463)
T ss_dssp CTTSHHHHHHHTT---C-HHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEET-T
T ss_pred CCCChhHhhhhcC---c-eeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecC-C
Confidence 000000 000000 0 000001112335678888888776643 56 999999999986532 223 35542221 2
Q ss_pred CceeEEeeeEEEeecCCcccc
Q 035933 154 DVIIDVVGDLLVAADGSRSSV 174 (405)
Q Consensus 154 g~~~~~~~d~vV~AdG~~S~v 174 (405)
|+..++.||.||.|+|....+
T Consensus 174 g~~~~~~~d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 174 GEELVRTTRALVVSPGGTPRI 194 (463)
T ss_dssp SCEEEEEESEEEECCCCEECC
T ss_pred CceEEEEeCEEEECCCCCCCC
Confidence 344458999999999985543
No 101
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.06 E-value=3.7e-10 Score=102.13 Aligned_cols=114 Identities=16% Similarity=0.155 Sum_probs=72.0
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQN 84 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 84 (405)
|+.+||+||||||||+++|+.|++.|++|+|||+.. + |..+.... ... ..+
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~------gg~~~~~~--------------~~~--~~~------ 53 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITGME-K------GGQLTTTT--------------EVE--NWP------ 53 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-T------TGGGGGCS--------------BCC--CST------
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-C------CceEecch--------------hhh--hCC------
Confidence 456899999999999999999999999999999642 1 21110000 000 000
Q ss_pred ceecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeee
Q 035933 85 RAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d 162 (405)
.++ ..+.+..+...+.+.+. .++ +++++ +..++ .+...+++. .++.. +.+|
T Consensus 54 -----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~--~~~~~~~v~----~~~~~--~~~~ 106 (320)
T 1trb_A 54 -----------------GDP-NDLTGPLLMERMHEHATKFETEIIFDH-INKVD--LQNRPFRLN----GDNGE--YTCD 106 (320)
T ss_dssp -----------------TCC-SSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEE--CSSSSEEEE----ESSCE--EEEE
T ss_pred -----------------CCC-CCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEE--ecCCEEEEE----eCCCE--EEcC
Confidence 000 01334555566655553 466 77776 88776 344456552 25554 8999
Q ss_pred EEEeecCCcccc
Q 035933 163 LLVAADGSRSSV 174 (405)
Q Consensus 163 ~vV~AdG~~S~v 174 (405)
+||.|+|..+..
T Consensus 107 ~lv~AtG~~~~~ 118 (320)
T 1trb_A 107 ALIIATGASARY 118 (320)
T ss_dssp EEEECCCEEECC
T ss_pred EEEECCCCCcCC
Confidence 999999987644
No 102
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=99.06 E-value=5e-10 Score=106.71 Aligned_cols=31 Identities=42% Similarity=0.529 Sum_probs=30.4
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
||+|||||+||+++|+.|++.|.+|+|+||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 7999999999999999999999999999998
No 103
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.04 E-value=1.1e-09 Score=98.86 Aligned_cols=35 Identities=20% Similarity=0.130 Sum_probs=32.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.|||+||||||||++||+.|++.|++|+|||+...
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~ 38 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMA 38 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSG
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 48999999999999999999999999999998753
No 104
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.03 E-value=1.7e-09 Score=104.49 Aligned_cols=114 Identities=12% Similarity=0.128 Sum_probs=76.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
..+||+||||||||+++|+.|+++|++|+|+|++. |..+ .. ..+. . .+ .
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~--------GG~~-~~--------~~~~-----~--~~------~- 259 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF--------GGQV-LD--------TVDI-----E--NY------I- 259 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST--------TGGG-TT--------CSCB-----C--CB------T-
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC--------CCcc-cc--------cccc-----c--cc------C-
Confidence 46899999999999999999999999999998632 1111 00 0000 0 00 0
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecC-CCeEEEEEeecCCCceeEEeee
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHD-KSTVNVKAKNLRTDVIIDVVGD 162 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~-~~~v~v~~~~~~~g~~~~~~~d 162 (405)
......+..+...|.+.+ ..++ ++.+++|.++..+.. +..++|+ +++|.. +.+|
T Consensus 260 ------------------~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~---~~~g~~--~~~d 316 (521)
T 1hyu_A 260 ------------------SVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIE---TASGAV--LKAR 316 (521)
T ss_dssp ------------------TBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEE---ETTSCE--EEEE
T ss_pred ------------------CCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEE---ECCCCE--EEcC
Confidence 000123456666776666 4578 999999999974322 3356666 567765 8999
Q ss_pred EEEeecCCccc
Q 035933 163 LLVAADGSRSS 173 (405)
Q Consensus 163 ~vV~AdG~~S~ 173 (405)
.||.|+|..+.
T Consensus 317 ~vVlAtG~~~~ 327 (521)
T 1hyu_A 317 SIIIATGAKWR 327 (521)
T ss_dssp EEEECCCEEEC
T ss_pred EEEECCCCCcC
Confidence 99999998764
No 105
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.02 E-value=1.4e-09 Score=107.35 Aligned_cols=62 Identities=13% Similarity=0.077 Sum_probs=43.6
Q ss_pred HHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcccc
Q 035933 112 DLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRSSV 174 (405)
Q Consensus 112 ~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S~v 174 (405)
.+...|.+.+ +.|+ ++.++.|.++..++ +.-.-|.+.+..+|+...+.|+.||.|+|..+.+
T Consensus 159 ~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~-g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKLGVSIQDRKEAIALIHQD-GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEET-TEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhCCCEEEECcEEEEEEecC-CEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 5666666665 3578 99999999997532 2212233333467776678999999999999865
No 106
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.99 E-value=6.7e-10 Score=113.43 Aligned_cols=59 Identities=14% Similarity=0.047 Sum_probs=44.2
Q ss_pred ccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeE-EEEEeecCCCceeEEeeeEEEeecCCcccc
Q 035933 108 AHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTV-NVKAKNLRTDVIIDVVGDLLVAADGSRSSV 174 (405)
Q Consensus 108 ~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v-~v~~~~~~~g~~~~~~~d~vV~AdG~~S~v 174 (405)
++...+...|.+.+. .|+ ++.+++|+++..++ +.+ .|+ +++| +++||.||.|+|.+|..
T Consensus 148 v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~---t~~G---~i~Ad~VV~AaG~~s~~ 209 (830)
T 1pj5_A 148 ASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQ---TADG---VIPADIVVSCAGFWGAK 209 (830)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEE---ETTE---EEECSEEEECCGGGHHH
T ss_pred EcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEE---ECCc---EEECCEEEECCccchHH
Confidence 566778888888774 578 99999999998643 333 344 4455 38999999999999853
No 107
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.95 E-value=4e-09 Score=95.00 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=32.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+|||+||||||||++||+.|++.|++|+||||..
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~ 39 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANLKTVMIERGI 39 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 6999999999999999999999999999999853
No 108
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.93 E-value=7.1e-10 Score=106.48 Aligned_cols=67 Identities=13% Similarity=0.109 Sum_probs=52.9
Q ss_pred ccccHHHHHHHHHhcCCC-ce-EEecceEEEEEEecCC------CeEEEEEeecCCCceeEEeeeEEEeecCCcc
Q 035933 106 LQAHWTDLHGLIYNTLPV-EI-VFWGHLYLTFCISHDK------STVNVKAKNLRTDVIIDVVGDLLVAADGSRS 172 (405)
Q Consensus 106 ~~~~r~~l~~~L~~~~~~-~~-i~~~~~v~~i~~~~~~------~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S 172 (405)
..+.|.++.++|...+.. +. ++|+++|+++++.+.+ ..|+|+..+..+|+..++.|+.||.|+|..-
T Consensus 140 ~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~~P 214 (501)
T 4b63_A 140 FLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGGTA 214 (501)
T ss_dssp SCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCCEE
T ss_pred CCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCCCC
Confidence 347889999999887743 34 9999999999876543 2588887777778777899999999999643
No 109
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.92 E-value=3.9e-09 Score=100.59 Aligned_cols=37 Identities=22% Similarity=0.256 Sum_probs=33.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
+++||+||||||||+++|+.|++.|++|+||||++..
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~ 39 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGEL 39 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCC
Confidence 3589999999999999999999999999999987653
No 110
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.91 E-value=1.6e-09 Score=103.34 Aligned_cols=33 Identities=15% Similarity=0.280 Sum_probs=31.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
++||+||||||||+++|+.|++.|++|+|||+.
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~ 35 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK 35 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 589999999999999999999999999999997
No 111
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.91 E-value=1e-08 Score=92.30 Aligned_cols=112 Identities=16% Similarity=0.136 Sum_probs=71.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEE-EccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVV-IEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i-~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
.+||+||||||||+++|+.|+++|++|+| +|| +.+ |..+.... .+. .++.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~------gG~~~~~~--------------~~~--~~~~------ 54 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMP------GGQITSSS--------------EIE--NYPG------ 54 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SST------TGGGGGCS--------------CBC--CSTT------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCC------Cceeeeec--------------eec--cCCC------
Confidence 47999999999999999999999999999 999 332 21110000 000 0000
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcCC-Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeE
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLP-VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~-~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 163 (405)
.+ ..+....+...+.+.+. .++ ++++ +|.++ .+.....+.+.. ..++ ++.+|.
T Consensus 55 -----------------~~-~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~--~~~~---~~~~d~ 109 (315)
T 3r9u_A 55 -----------------VA-QVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKL--EGGK---TELAKA 109 (315)
T ss_dssp -----------------CC-SCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEE--TTSC---EEEEEE
T ss_pred -----------------CC-CCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEE--ecCC---EEEeCE
Confidence 00 01344667777777664 467 7777 88888 544334566321 2233 489999
Q ss_pred EEeecCCcc
Q 035933 164 LVAADGSRS 172 (405)
Q Consensus 164 vV~AdG~~S 172 (405)
||.|+|...
T Consensus 110 lvlAtG~~~ 118 (315)
T 3r9u_A 110 VIVCTGSAP 118 (315)
T ss_dssp EEECCCEEE
T ss_pred EEEeeCCCC
Confidence 999999844
No 112
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.89 E-value=3.5e-08 Score=97.52 Aligned_cols=36 Identities=25% Similarity=0.440 Sum_probs=33.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHH---H-cCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALI---L-AGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~---~-~g~~v~i~E~~~~~ 42 (405)
++||+|||||+||+++|+.|+ + +|.+|+|+||....
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCC
Confidence 479999999999999999999 6 89999999999754
No 113
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.87 E-value=4.1e-09 Score=101.21 Aligned_cols=38 Identities=29% Similarity=0.385 Sum_probs=33.1
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
|+++||+||||||||+++|+.|++.|++|+||||++..
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 60 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTY 60 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45699999999999999999999999999999997653
No 114
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.86 E-value=2e-09 Score=103.04 Aligned_cols=38 Identities=24% Similarity=0.370 Sum_probs=34.3
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
+.++||+||||||||+++|+.|++.|++|+|||+.+.+
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 34589999999999999999999999999999997653
No 115
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.85 E-value=7.4e-09 Score=97.56 Aligned_cols=36 Identities=25% Similarity=0.545 Sum_probs=33.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~~ 41 (405)
+++||+||||||||+++|..|++.|+ +|+|||+.+.
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~ 40 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATV 40 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCS
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCC
Confidence 35899999999999999999999998 7999998865
No 116
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.85 E-value=7.4e-09 Score=98.89 Aligned_cols=36 Identities=14% Similarity=0.164 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~ 42 (405)
++||+||||||||+++|..|++. |++|+|||+.+..
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~ 40 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRI 40 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcc
Confidence 47999999999999999999998 9999999999874
No 117
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.84 E-value=1.1e-08 Score=98.72 Aligned_cols=37 Identities=27% Similarity=0.363 Sum_probs=33.8
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+.++||+||||||||+++|+.|++.|++|+||||.+.
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~ 66 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTP 66 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCc
Confidence 3468999999999999999999999999999999753
No 118
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.82 E-value=2e-08 Score=93.99 Aligned_cols=42 Identities=21% Similarity=0.379 Sum_probs=33.7
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCCCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTRGP 42 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~~~ 42 (405)
|+.+.+++||+||||||||+++|..|++.|. +|+|||+.+..
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~ 44 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAER 44 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSC
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCC
Confidence 5554456899999999999999999999998 49999998753
No 119
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.80 E-value=1.8e-08 Score=96.42 Aligned_cols=63 Identities=21% Similarity=0.270 Sum_probs=45.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCC----------CCcceee--CccHHHHHHHhccC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNP----------TGAGIAL--HLLSQKIVKSWLHQ 68 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~----------~~~~~~l--~~~~~~~l~~~~~~ 68 (405)
..+||+|||||++|+++|+.|+++|++|+|+|+++.+..... .|..+.. .+...++++++++.
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~~~g~~~~~~~~~~~~~~~~~~gl~ 89 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGTHALAGYLVEQGPNSFLDREPATRALAAALNLE 89 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCEEEETTEEEESSCCCEETTCHHHHHHHHHTTCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeeeeccCCeeeecChhhhhhhhHHHHHHHHHcCCc
Confidence 458999999999999999999999999999999987643211 1111111 34567888888763
No 120
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.79 E-value=2.1e-08 Score=96.05 Aligned_cols=33 Identities=18% Similarity=0.270 Sum_probs=31.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
++||+||||||||+++|+.|++.|++|+||||.
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 589999999999999999999999999999994
No 121
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.79 E-value=7.3e-09 Score=99.04 Aligned_cols=40 Identities=18% Similarity=0.380 Sum_probs=33.2
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|..||+++||+||||||||+++|+.|++.|.+|+||||..
T Consensus 5 m~~~~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 5 MSTNTKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCccccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 5555567899999999999999999999999999999973
No 122
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.79 E-value=3.4e-08 Score=94.71 Aligned_cols=37 Identities=24% Similarity=0.468 Sum_probs=33.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcC---CcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAG---WDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g---~~v~i~E~~~~~ 42 (405)
+++||+||||||||+++|..|++.| .+|+|||+.+..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~ 73 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNI 73 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 4589999999999999999999988 999999998753
No 123
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.77 E-value=2.8e-09 Score=102.10 Aligned_cols=37 Identities=24% Similarity=0.375 Sum_probs=33.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.++||+||||||||+++|+.|++.|++|+|||+.+.+
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 3589999999999999999999999999999997653
No 124
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.76 E-value=9.2e-08 Score=91.91 Aligned_cols=60 Identities=15% Similarity=0.272 Sum_probs=44.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCC----------CCccee--eCccHHHHHHHhcc
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNP----------TGAGIA--LHLLSQKIVKSWLH 67 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~----------~~~~~~--l~~~~~~~l~~~~~ 67 (405)
+||+|||||+|||++|+.|++.|++|+|+|+++.+..... .|..+. ..+...+.++++++
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl 111 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKM 111 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCC
Confidence 7999999999999999999999999999999987643211 111111 24556677777776
No 125
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.75 E-value=7e-09 Score=99.03 Aligned_cols=37 Identities=24% Similarity=0.373 Sum_probs=34.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.++||+||||||||+++|+.|++.|++|+|||+.+.+
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGAL 41 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 4589999999999999999999999999999998664
No 126
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.75 E-value=1.8e-07 Score=91.99 Aligned_cols=40 Identities=25% Similarity=0.312 Sum_probs=34.6
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 4 RMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 4 ~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
|+..+||+|||||+||+++|+.|++.|++|+|+||.+...
T Consensus 43 ~~~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 43 MDIKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 3456899999999999999999999999999999987653
No 127
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.75 E-value=7.9e-08 Score=90.16 Aligned_cols=37 Identities=30% Similarity=0.471 Sum_probs=33.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCc--EEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWD--VVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~--v~i~E~~~~~ 42 (405)
+++||+|||||+||+++|..|+++|++ |+|+|+.+.+
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 46 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEI 46 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCC
Confidence 457999999999999999999999987 9999998764
No 128
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.75 E-value=1.6e-08 Score=94.77 Aligned_cols=34 Identities=32% Similarity=0.460 Sum_probs=32.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---cCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALIL---AGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~---~g~~v~i~E~~~~ 41 (405)
++|+|||||+||+++|..|++ .|++|+|||+++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~ 38 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRF 38 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCC
Confidence 489999999999999999999 8999999999874
No 129
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.75 E-value=1.3e-09 Score=99.98 Aligned_cols=34 Identities=18% Similarity=0.283 Sum_probs=31.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC------CcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAG------WDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g------~~v~i~E~~~~ 41 (405)
+||+|||||++|+++|+.|+++| .+|+|+|+...
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 39999999999999999999998 99999999864
No 130
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.74 E-value=4.6e-08 Score=98.09 Aligned_cols=39 Identities=28% Similarity=0.372 Sum_probs=35.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPT 44 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~ 44 (405)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 357999999999999999999999999999999876543
No 131
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.74 E-value=2.1e-08 Score=95.80 Aligned_cols=37 Identities=27% Similarity=0.385 Sum_probs=34.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
+++||+||||||||+++|+.|++.|++|+||||.+.+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 3689999999999999999999999999999998754
No 132
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.73 E-value=2e-08 Score=93.07 Aligned_cols=37 Identities=30% Similarity=0.360 Sum_probs=34.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
++.+|+|||||+||+++|..|++.+.+|+|||+.+..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~ 44 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYL 44 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCC
Confidence 4689999999999999999998789999999999864
No 133
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.72 E-value=1.3e-08 Score=96.21 Aligned_cols=34 Identities=21% Similarity=0.396 Sum_probs=32.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHH---cCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALIL---AGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~---~g~~v~i~E~~~~ 41 (405)
+||+|||||+||+++|..|++ .|++|+|||+.+.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~ 41 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDY 41 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSE
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCC
Confidence 699999999999999999999 8999999999874
No 134
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.71 E-value=4.1e-08 Score=94.12 Aligned_cols=39 Identities=15% Similarity=0.311 Sum_probs=34.6
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCC
Q 035933 4 RMRKPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGP 42 (405)
Q Consensus 4 ~~~~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~ 42 (405)
++..+||+||||||||+++|..|++. |.+|+|||+.+..
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CCCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 44568999999999999999999887 8999999998764
No 135
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.71 E-value=2.3e-08 Score=98.23 Aligned_cols=116 Identities=16% Similarity=0.184 Sum_probs=71.1
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccc
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTID 82 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (405)
|+++||+||||||||+++|..|++. |++|+|||+.+.... .+.++.. .++. ...+.
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~----------~~~~lp~--~~~g-------~~~~~--- 91 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISF----------ANCGLPY--YIGG-------VITER--- 91 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB----------CGGGHHH--HHTT-------SSCCG---
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccc----------cCCCCch--hhcC-------cCCCh---
Confidence 3457999999999999999999998 899999999986421 1111100 0000 00000
Q ss_pred ccceecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEee
Q 035933 83 QNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVG 161 (405)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~ 161 (405)
.. .. . ..+..+. + ..++ ++++++|.++. .+...+.+. +..+|+...+.+
T Consensus 92 -------~~-------------~~-~--~~~~~~~-~--~~gi~v~~~~~V~~id--~~~~~v~v~--~~~~g~~~~~~~ 141 (588)
T 3ics_A 92 -------QK-------------LL-V--QTVERMS-K--RFNLDIRVLSEVVKIN--KEEKTITIK--NVTTNETYNEAY 141 (588)
T ss_dssp -------GG-------------GB-S--SCHHHHH-H--HTTCEEECSEEEEEEE--TTTTEEEEE--ETTTCCEEEEEC
T ss_pred -------HH-------------hh-c--cCHHHHH-H--hcCcEEEECCEEEEEE--CCCCEEEEe--ecCCCCEEEEeC
Confidence 00 00 0 0011111 1 1255 88899999987 555566654 234676556899
Q ss_pred eEEEeecCCcc
Q 035933 162 DLLVAADGSRS 172 (405)
Q Consensus 162 d~vV~AdG~~S 172 (405)
|.||.|+|...
T Consensus 142 d~lviAtG~~p 152 (588)
T 3ics_A 142 DVLILSPGAKP 152 (588)
T ss_dssp SEEEECCCEEE
T ss_pred CEEEECCCCCC
Confidence 99999999743
No 136
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.70 E-value=8.1e-08 Score=91.09 Aligned_cols=35 Identities=34% Similarity=0.386 Sum_probs=33.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~ 42 (405)
+||+||||||||+++|..|++. |.+|+|||+.+..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~ 39 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATV 39 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5999999999999999999998 9999999999864
No 137
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.68 E-value=1.1e-07 Score=89.51 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC--CcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAG--WDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g--~~v~i~E~~~~ 41 (405)
++|+|||||+||+++|..|++.+ ++|+|||+++.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCC
Confidence 58999999999999999999875 79999999865
No 138
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.68 E-value=3.1e-08 Score=93.93 Aligned_cols=37 Identities=38% Similarity=0.544 Sum_probs=33.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~ 42 (405)
+++||+||||||||+++|..|++. |++|+|||+.+..
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~ 40 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWV 40 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCC
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCcc
Confidence 347999999999999999999998 8899999998764
No 139
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.68 E-value=1e-07 Score=90.76 Aligned_cols=35 Identities=20% Similarity=0.275 Sum_probs=33.0
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
+.++||+||||||||+++|+.|++.|++|+|||+.
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 2 EPPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 35689999999999999999999999999999997
No 140
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.66 E-value=3.3e-08 Score=94.26 Aligned_cols=36 Identities=17% Similarity=0.279 Sum_probs=33.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
++||+||||||||+++|+.|++.|++|+|||+.+.+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~ 37 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGAL 37 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 479999999999999999999999999999998653
No 141
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.66 E-value=1.6e-08 Score=96.70 Aligned_cols=36 Identities=22% Similarity=0.327 Sum_probs=33.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
++||+||||||||+++|..|++.|++|+|||+.+.+
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~ 41 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETL 41 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCc
Confidence 589999999999999999999999999999998653
No 142
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.66 E-value=7.4e-08 Score=92.32 Aligned_cols=35 Identities=26% Similarity=0.495 Sum_probs=32.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+++||+||||||||+++|+.|++.|++|+||||.+
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~ 39 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVE 39 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecc
Confidence 35899999999999999999999999999999854
No 143
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.65 E-value=2.3e-08 Score=95.61 Aligned_cols=35 Identities=31% Similarity=0.428 Sum_probs=32.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~ 42 (405)
+||+||||||||+++|..|++. |.+|+|||+.+..
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 73 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIY 73 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCC
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 6999999999999999999996 8999999998764
No 144
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.65 E-value=3e-08 Score=89.83 Aligned_cols=38 Identities=29% Similarity=0.433 Sum_probs=33.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH--cCCcEEEEccCCCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALIL--AGWDVVVIEKTRGPPT 44 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~--~g~~v~i~E~~~~~~~ 44 (405)
.+||+||||||||++||+.|++ .|++|+||||.+.+..
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG 104 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCc
Confidence 4799999999999999999985 4999999999987643
No 145
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.64 E-value=1.2e-07 Score=88.69 Aligned_cols=35 Identities=23% Similarity=0.470 Sum_probs=32.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCc--EEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWD--VVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~--v~i~E~~~~~ 42 (405)
++|+|||||+||+++|..|+++|++ |+|||+.+..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~ 39 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHL 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSS
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCC
Confidence 4999999999999999999999987 9999998764
No 146
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.64 E-value=2.5e-08 Score=94.54 Aligned_cols=35 Identities=23% Similarity=0.220 Sum_probs=32.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~ 42 (405)
+||+||||||||+++|..|++. |.+|+|||+.+..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFI 37 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCcc
Confidence 4899999999999999999998 9999999998753
No 147
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.63 E-value=2.7e-08 Score=94.37 Aligned_cols=44 Identities=18% Similarity=0.135 Sum_probs=37.5
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPT 44 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~ 44 (405)
|+.|+..+||+|||||++||++|..|++.|++|+|+|+++.+..
T Consensus 5 ~~~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG 48 (453)
T 2bcg_G 5 QETIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGG 48 (453)
T ss_dssp --CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred hhhccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCc
Confidence 33445568999999999999999999999999999999987643
No 148
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.62 E-value=2.9e-08 Score=94.17 Aligned_cols=35 Identities=31% Similarity=0.286 Sum_probs=32.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~ 42 (405)
+||+||||||||+++|..|++. |.+|+|||+.+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~ 37 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNI 37 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCC
Confidence 5899999999999999999998 9999999998753
No 149
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.62 E-value=5.9e-08 Score=92.15 Aligned_cols=33 Identities=24% Similarity=0.383 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
++||+||||||||+++|..|++.|++|+|||+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 35 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG 35 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC
Confidence 479999999999999999999999999999997
No 150
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.60 E-value=2e-08 Score=97.04 Aligned_cols=44 Identities=18% Similarity=0.312 Sum_probs=36.2
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHH-cCCcEEEEccCCCCCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALIL-AGWDVVVIEKTRGPPT 44 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~-~g~~v~i~E~~~~~~~ 44 (405)
|+...+++||+|||||+|||+||+.|++ .|++|+|+|+++.+..
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG 48 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGG 48 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCG
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcC
Confidence 3433345899999999999999999998 4999999999988654
No 151
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.60 E-value=3e-07 Score=86.62 Aligned_cols=34 Identities=21% Similarity=0.404 Sum_probs=32.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHH--cCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALIL--AGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~--~g~~v~i~E~~~~ 41 (405)
+||+|||||+||+++|..|++ .|++|+|||+.+.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~ 38 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCC
Confidence 699999999999999999999 7899999999875
No 152
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.59 E-value=4e-08 Score=91.56 Aligned_cols=42 Identities=19% Similarity=0.283 Sum_probs=35.9
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEccCCCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILA-GWDVVVIEKTRGP 42 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~-g~~v~i~E~~~~~ 42 (405)
|+.|++++||+|||||++|+++|+.|++. |++|+|+|+++.+
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 55565579999999999999999999999 9999999999764
No 153
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.58 E-value=4.7e-08 Score=95.57 Aligned_cols=35 Identities=23% Similarity=0.317 Sum_probs=32.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~ 42 (405)
+||+||||||||+++|..|++. |.+|+|||+.+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~ 38 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYV 38 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCc
Confidence 4899999999999999999998 8999999999764
No 154
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.56 E-value=7.1e-08 Score=92.42 Aligned_cols=112 Identities=21% Similarity=0.198 Sum_probs=72.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
.+||+||||||||+++|+.|++. ++|+|||+.+.+. ..+... . . . ..+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~G------G~~~~~-----------~-~-~--~~g---------- 155 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLG------GDMWLK-----------G-I-K--QEG---------- 155 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSS------CSGGGT-----------C-S-E--ETT----------
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCC------Ceeecc-----------c-c-c--cCC----------
Confidence 46999999999999999999999 9999999987641 111000 0 0 0 000
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
++. ....+...+.+.+..++ +++++.+.++... ...+.+.. .++++...+.+|.||
T Consensus 156 ----------------~~~---~~~~~~~~l~~~l~~~v~~~~~~~v~~i~~~--~~~~~~~~--~~~~~~~~~~~d~lv 212 (493)
T 1y56_A 156 ----------------FNK---DSRKVVEELVGKLNENTKIYLETSALGVFDK--GEYFLVPV--VRGDKLIEILAKRVV 212 (493)
T ss_dssp ----------------TTE---EHHHHHHHHHHTCCTTEEEETTEEECCCEEC--SSSEEEEE--EETTEEEEEEESCEE
T ss_pred ----------------CCC---CHHHHHHHHHHHHhcCCEEEcCCEEEEEEcC--CcEEEEEE--ecCCeEEEEECCEEE
Confidence 000 11334445555555677 8889999888743 33444331 235554468999999
Q ss_pred eecCCccc
Q 035933 166 AADGSRSS 173 (405)
Q Consensus 166 ~AdG~~S~ 173 (405)
.|+|....
T Consensus 213 lAtGa~~~ 220 (493)
T 1y56_A 213 LATGAIDS 220 (493)
T ss_dssp ECCCEEEC
T ss_pred ECCCCCcc
Confidence 99997653
No 155
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.56 E-value=1.3e-07 Score=90.75 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=32.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc---CCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILA---GWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~---g~~v~i~E~~~ 40 (405)
++||+||||||||+++|+.|++. |++|+|||+.+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~ 38 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG 38 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC
Confidence 47999999999999999999999 99999999986
No 156
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.55 E-value=4.8e-07 Score=84.45 Aligned_cols=35 Identities=23% Similarity=0.364 Sum_probs=32.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGW--DVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~~~ 42 (405)
++|+|||||+||+++|..|+++|+ +|+|||+.+..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~ 38 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHL 38 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCC
Confidence 689999999999999999999999 89999998753
No 157
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.54 E-value=1.2e-07 Score=89.93 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=32.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
+||+||||||||+++|..|++.|++|+|||+.+.+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 79999999999999999999999999999998653
No 158
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.52 E-value=1.5e-07 Score=86.68 Aligned_cols=34 Identities=38% Similarity=0.502 Sum_probs=31.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.||+||||||||+++|..|++.| +|+|+|+.+..
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~ 42 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVP 42 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCC
Confidence 69999999999999999999999 99999998753
No 159
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.50 E-value=3.1e-07 Score=87.86 Aligned_cols=34 Identities=32% Similarity=0.598 Sum_probs=31.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
..+||+||||||||+++|+.|++.|++|+||||.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 4689999999999999999999999999999964
No 160
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.49 E-value=5.9e-07 Score=83.23 Aligned_cols=99 Identities=19% Similarity=0.314 Sum_probs=72.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . . .
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-----~--------------------~-----~--------- 185 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP-----G--------------------L-----L--------- 185 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----T--------------------T-----S---------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh-----c--------------------c-----c---------
Confidence 46899999999999999999999999999999865311 0 0 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
+ ..+.+.|.+.+ +.|+ ++++++|.+++.+ +..+.++ +++|+. +++|.|
T Consensus 186 ----------------------~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~~~v~---~~~g~~--i~~d~v 235 (384)
T 2v3a_A 186 ----------------------H-PAAAKAVQAGLEGLGVRFHLGPVLASLKKA--GEGLEAH---LSDGEV--IPCDLV 235 (384)
T ss_dssp ----------------------C-HHHHHHHHHHHHTTTCEEEESCCEEEEEEE--TTEEEEE---ETTSCE--EEESEE
T ss_pred ----------------------C-HHHHHHHHHHHHHcCCEEEeCCEEEEEEec--CCEEEEE---ECCCCE--EECCEE
Confidence 0 12223333333 3577 9999999999853 3356665 567765 899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|+|..+..
T Consensus 236 v~a~G~~p~~ 245 (384)
T 2v3a_A 236 VSAVGLRPRT 245 (384)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCH
Confidence 9999998765
No 161
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.49 E-value=2.8e-07 Score=86.90 Aligned_cols=35 Identities=31% Similarity=0.615 Sum_probs=31.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC--CcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAG--WDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g--~~v~i~E~~~~~ 42 (405)
.+|+||||||||+++|..|++.| .+|+|||+.+..
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~ 37 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDM 37 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCC
Confidence 37999999999999999999988 579999998753
No 162
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.47 E-value=5e-07 Score=85.93 Aligned_cols=102 Identities=18% Similarity=0.200 Sum_probs=72.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . . .
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~---------------~-~----------------- 209 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP------Q---------------G-D----------------- 209 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T---------------S-C-----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc------c---------------c-C-----------------
Confidence 36899999999999999999999999999999865311 0 0 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCC--CceeEEeee
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRT--DVIIDVVGD 162 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~--g~~~~~~~d 162 (405)
..+.+.|.+.+ +.|+ ++++++|.+++.+ +..+.+++. .+ |+..++.+|
T Consensus 210 ------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~--~~~~~v~~~--~~~~g~~~~i~~D 261 (464)
T 2eq6_A 210 ------------------------PETAALLRRALEKEGIRVRTKTKAVGYEKK--KDGLHVRLE--PAEGGEGEEVVVD 261 (464)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEE--TTEEEEEEE--ETTCCSCEEEEES
T ss_pred ------------------------HHHHHHHHHHHHhcCCEEEcCCEEEEEEEe--CCEEEEEEe--ecCCCceeEEEcC
Confidence 11222333333 2478 9999999999843 334666532 14 664458999
Q ss_pred EEEeecCCccccc
Q 035933 163 LLVAADGSRSSVR 175 (405)
Q Consensus 163 ~vV~AdG~~S~vr 175 (405)
.||.|+|..+...
T Consensus 262 ~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 262 KVLVAVGRKPRTE 274 (464)
T ss_dssp EEEECSCEEESCT
T ss_pred EEEECCCcccCCC
Confidence 9999999887654
No 163
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.44 E-value=1.9e-07 Score=87.74 Aligned_cols=38 Identities=26% Similarity=0.423 Sum_probs=35.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcC-CcEEEEccCCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAG-WDVVVIEKTRGPP 43 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g-~~v~i~E~~~~~~ 43 (405)
+++||+|||||++||++|+.|++.| ++|+|+|+++.+.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCC
Confidence 4689999999999999999999999 8999999988764
No 164
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.42 E-value=1.1e-07 Score=91.68 Aligned_cols=40 Identities=35% Similarity=0.457 Sum_probs=36.2
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcC-CcEEEEccCCCCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAG-WDVVVIEKTRGPPT 44 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g-~~v~i~E~~~~~~~ 44 (405)
|+.+||+|||||+|||+||+.|++.| ++|+|+|+++.+..
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGG 46 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCC
Confidence 44689999999999999999999999 99999999987644
No 165
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.42 E-value=2e-06 Score=82.19 Aligned_cols=106 Identities=17% Similarity=0.234 Sum_probs=74.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. . +.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~------------------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA------S--MD------------------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS------S--SC-------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc------c--cC-------------------------------
Confidence 36899999999999999999999999999999875311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++++++|.++...+++..+.+.+.+..+|+..++.+|.|
T Consensus 224 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~v 279 (478)
T 1v59_A 224 ------------------------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVL 279 (478)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEE
Confidence 11222333333 2477 999999999974224445666643323444445899999
Q ss_pred EeecCCccccc
Q 035933 165 VAADGSRSSVR 175 (405)
Q Consensus 165 V~AdG~~S~vr 175 (405)
|.|.|......
T Consensus 280 v~a~G~~p~~~ 290 (478)
T 1v59_A 280 LVAVGRRPYIA 290 (478)
T ss_dssp EECSCEEECCT
T ss_pred EECCCCCcCCC
Confidence 99999887654
No 166
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.41 E-value=7.8e-07 Score=84.38 Aligned_cols=98 Identities=16% Similarity=0.209 Sum_probs=70.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . ..
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~------~--~~------------------------------- 207 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP------T--MD------------------------------- 207 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------T--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc------c--cC-------------------------------
Confidence 36899999999999999999999999999999865311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++++++|.+++.+ +..+.++ +++|+. +.+|.|
T Consensus 208 ------------------------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~v~v~---~~~g~~--i~~D~v 256 (455)
T 2yqu_A 208 ------------------------LEVSRAAERVFKKQGLTIRTGVRVTAVVPE--AKGARVE---LEGGEV--LEADRV 256 (455)
T ss_dssp ------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEEE--TTEEEEE---ETTSCE--EEESEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEECCEEEEEEEe--CCEEEEE---ECCCeE--EEcCEE
Confidence 01112222222 2377 9999999999853 3356665 456665 899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|+|..+..
T Consensus 257 v~A~G~~p~~ 266 (455)
T 2yqu_A 257 LVAVGRRPYT 266 (455)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCC
Confidence 9999998765
No 167
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.41 E-value=4e-07 Score=84.89 Aligned_cols=34 Identities=35% Similarity=0.558 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC--CcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAG--WDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g--~~v~i~E~~~~ 41 (405)
++|+||||||||+++|..|++.+ .+|+|||+++.
T Consensus 3 KkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 3 RKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred CEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 58999999999999999999875 68999998764
No 168
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.39 E-value=1.4e-07 Score=89.54 Aligned_cols=40 Identities=33% Similarity=0.362 Sum_probs=36.0
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPT 44 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~ 44 (405)
++++||+|||||++|+++|+.|++.|++|+|+|+++.+..
T Consensus 3 ~~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG 42 (453)
T 2yg5_A 3 TLQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGG 42 (453)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCC
Confidence 3468999999999999999999999999999999987643
No 169
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.39 E-value=3.1e-07 Score=83.99 Aligned_cols=38 Identities=32% Similarity=0.472 Sum_probs=34.6
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC-CCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKT-RGP 42 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~-~~~ 42 (405)
...+||+|||||+|||++|+.|++.|++|+|||++ +.+
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 34689999999999999999999999999999998 654
No 170
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.37 E-value=6.5e-07 Score=86.19 Aligned_cols=35 Identities=20% Similarity=0.390 Sum_probs=32.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+|||+||||||+|+.+|..+++.|.+|+|+|+...
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 38999999999999999999999999999998764
No 171
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.36 E-value=1.4e-06 Score=83.52 Aligned_cols=36 Identities=25% Similarity=0.375 Sum_probs=33.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++++|||||||+||+.+|..|++.+++|+|||+++.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~ 76 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSY 76 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCC
Confidence 457899999999999999999999999999999864
No 172
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.36 E-value=3.5e-07 Score=87.40 Aligned_cols=38 Identities=26% Similarity=0.400 Sum_probs=34.7
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcC-CcEEEEccCCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAG-WDVVVIEKTRGP 42 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g-~~v~i~E~~~~~ 42 (405)
++.+||+|||||++|+++|+.|+++| .+|+|+|+++.+
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 34689999999999999999999998 799999999765
No 173
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.33 E-value=4.8e-07 Score=86.72 Aligned_cols=39 Identities=31% Similarity=0.498 Sum_probs=35.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPT 44 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~ 44 (405)
+.+||+|||||+|||++|+.|++.|++|+|+|+.+.+..
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG 48 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGG 48 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCC
Confidence 468999999999999999999999999999999987543
No 174
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.30 E-value=5.3e-07 Score=83.44 Aligned_cols=38 Identities=24% Similarity=0.391 Sum_probs=34.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
+++||+|||||++|+++|..|+++|++|+|+|+++.+.
T Consensus 2 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 2 KSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 35799999999999999999999999999999987653
No 175
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.29 E-value=6.1e-07 Score=82.76 Aligned_cols=37 Identities=24% Similarity=0.362 Sum_probs=34.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
..+||+|||||++|+++|+.|++.|.+|+|+|+++..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 4579999999999999999999999999999998764
No 176
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.28 E-value=4.2e-07 Score=86.48 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=32.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
.++||+||||||+|+++|+.|+++|++|+||||.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3589999999999999999999999999999993
No 177
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.28 E-value=5.3e-07 Score=86.77 Aligned_cols=63 Identities=17% Similarity=0.212 Sum_probs=46.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCC----------CCccee--eCccHHHHHHHhccC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNP----------TGAGIA--LHLLSQKIVKSWLHQ 68 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~----------~~~~~~--l~~~~~~~l~~~~~~ 68 (405)
+.+||+|||||++||++|+.|+++|++|+|+|+++.+..... .|..+. ..+...++++++|+.
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~ 86 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLR 86 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCG
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCc
Confidence 358999999999999999999999999999999987643210 111111 134567788888763
No 178
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.28 E-value=2.3e-06 Score=80.97 Aligned_cols=101 Identities=13% Similarity=0.117 Sum_probs=71.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . +.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~~~----------------------------- 209 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP------S--FDPM----------------------------- 209 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T--SCHH-----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh------h--hhHH-----------------------------
Confidence 36899999999999999999999999999999865310 0 0000
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
-...+.+.|.+ .|+ ++++++|.+++.+++ ..+.++ +++|+. +++|.||
T Consensus 210 ----------------------~~~~l~~~l~~---~Gv~i~~~~~v~~i~~~~~-~~~~v~---~~~g~~--i~~D~vv 258 (450)
T 1ges_A 210 ----------------------ISETLVEVMNA---EGPQLHTNAIPKAVVKNTD-GSLTLE---LEDGRS--ETVDCLI 258 (450)
T ss_dssp ----------------------HHHHHHHHHHH---HSCEEECSCCEEEEEECTT-SCEEEE---ETTSCE--EEESEEE
T ss_pred ----------------------HHHHHHHHHHH---CCCEEEeCCEEEEEEEeCC-cEEEEE---ECCCcE--EEcCEEE
Confidence 00122222322 377 999999999985332 235555 567764 8999999
Q ss_pred eecCCccccc
Q 035933 166 AADGSRSSVR 175 (405)
Q Consensus 166 ~AdG~~S~vr 175 (405)
.|+|..+...
T Consensus 259 ~a~G~~p~~~ 268 (450)
T 1ges_A 259 WAIGREPAND 268 (450)
T ss_dssp ECSCEEESCT
T ss_pred ECCCCCcCCC
Confidence 9999987653
No 179
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.28 E-value=2.9e-06 Score=80.62 Aligned_cols=145 Identities=9% Similarity=-0.045 Sum_probs=80.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCCCCCCCCCc-ceeeCccHHHHHHHhccChhhhhcccCCccccc
Q 035933 7 KPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGPPTGNPTGA-GIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQ 83 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~~~~~~~~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (405)
..+|+|||||.+|+-+|..|++. |.+|++++|.+.......... .-...+.....+..+.. ......... . .
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~---~~~~~~~~~-~-~ 301 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREH---AERERLLRE-Y-H 301 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCH---HHHHHHHHH-T-G
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCH---HHHHHHHHH-h-h
Confidence 46899999999999999999998 999999999876422110000 00112222222222211 000000000 0 0
Q ss_pred cceecCccceeeeecccCCcccccccHHHHHHHHHhcC--CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEe
Q 035933 84 NRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL--PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVV 160 (405)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~--~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~ 160 (405)
...+. ..... +-...+..++.+.+ ..++ ++.+++|.+++.+ +..+.+++++..+|+..++.
T Consensus 302 ~~~~~-------------~~~~~-~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~--~~~~~v~~~~~~~g~~~~~~ 365 (463)
T 3s5w_A 302 NTNYS-------------VVDTD-LIERIYGVFYRQKVSGIPRHAFRCMTTVERATAT--AQGIELALRDAGSGELSVET 365 (463)
T ss_dssp GGTSS-------------CBCHH-HHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEE--TTEEEEEEEETTTCCEEEEE
T ss_pred ccCCC-------------cCCHH-HHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEec--CCEEEEEEEEcCCCCeEEEE
Confidence 00000 00000 00122222333333 2577 9999999999853 45677776655678777799
Q ss_pred eeEEEeecCCcc
Q 035933 161 GDLLVAADGSRS 172 (405)
Q Consensus 161 ~d~vV~AdG~~S 172 (405)
+|+||.|+|...
T Consensus 366 ~D~Vv~AtG~~p 377 (463)
T 3s5w_A 366 YDAVILATGYER 377 (463)
T ss_dssp ESEEEECCCEEC
T ss_pred CCEEEEeeCCCC
Confidence 999999999654
No 180
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.27 E-value=5.5e-06 Score=78.36 Aligned_cols=99 Identities=22% Similarity=0.292 Sum_probs=69.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.. . . .
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~--------------------~-----~-------- 189 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLG-----V--------------------Y-----L-------- 189 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-----T--------------------T-----C--------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccc-----c--------------------c-----C--------
Confidence 357999999999999999999999999999999865311 0 0 0
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeE
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 163 (405)
+ ..+.+.|.+.+ +.|+ ++++++|.+++. ++..+.+. + ++.. +++|.
T Consensus 190 -----------------------~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~~v~~v~---~-~~~~--i~~d~ 237 (447)
T 1nhp_A 190 -----------------------D-KEFTDVLTEEMEANNITIATGETVERYEG--DGRVQKVV---T-DKNA--YDADL 237 (447)
T ss_dssp -----------------------C-HHHHHHHHHHHHTTTEEEEESCCEEEEEC--SSBCCEEE---E-SSCE--EECSE
T ss_pred -----------------------C-HHHHHHHHHHHHhCCCEEEcCCEEEEEEc--cCcEEEEE---E-CCCE--EECCE
Confidence 0 12233444444 3588 999999999973 32222343 3 4543 89999
Q ss_pred EEeecCCcccc
Q 035933 164 LVAADGSRSSV 174 (405)
Q Consensus 164 vV~AdG~~S~v 174 (405)
||.|+|..+..
T Consensus 238 vi~a~G~~p~~ 248 (447)
T 1nhp_A 238 VVVAVGVRPNT 248 (447)
T ss_dssp EEECSCEEESC
T ss_pred EEECcCCCCCh
Confidence 99999987654
No 181
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.26 E-value=6.4e-07 Score=85.13 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=32.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
+++||+||||||||+++|..|++.|++|+|||+.
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 4689999999999999999999999999999997
No 182
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.24 E-value=5.3e-07 Score=86.11 Aligned_cols=35 Identities=20% Similarity=0.388 Sum_probs=32.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
.++||+||||||||+++|+.|++.|++|+||||..
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~ 53 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHK 53 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC
Confidence 45899999999999999999999999999999763
No 183
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.24 E-value=4.6e-06 Score=79.05 Aligned_cols=101 Identities=18% Similarity=0.231 Sum_probs=70.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . +.
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~------------------------------- 210 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS------G--FE------------------------------- 210 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------T--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc------c--cC-------------------------------
Confidence 46899999999999999999999999999999865310 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++.+++|.+++.+ +..+.+++. .+|+..++++|.|
T Consensus 211 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~~~v~~~--~~g~~~~~~~D~v 262 (455)
T 1ebd_A 211 ------------------------KQMAAIIKKRLKKKGVEVVTNALAKGAEER--EDGVTVTYE--ANGETKTIDADYV 262 (455)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEE--TTEEEEEEE--ETTEEEEEEESEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCeEEEEEE--eCCceeEEEcCEE
Confidence 11122222222 2477 9999999999743 334555532 1333345899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|+|.....
T Consensus 263 v~a~G~~p~~ 272 (455)
T 1ebd_A 263 LVTVGRRPNT 272 (455)
T ss_dssp EECSCEEESC
T ss_pred EECcCCCccc
Confidence 9999988654
No 184
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.23 E-value=5.8e-07 Score=85.46 Aligned_cols=36 Identities=22% Similarity=0.332 Sum_probs=33.5
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|+++||+||||||||+++|..|++.|++|+|||+.+
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 346899999999999999999999999999999976
No 185
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=5.8e-06 Score=78.71 Aligned_cols=103 Identities=11% Similarity=0.126 Sum_probs=71.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. . +.
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~------~--~~------------------------------- 217 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP------T--MD------------------------------- 217 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST------T--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc------c--cc-------------------------------
Confidence 36899999999999999999999999999999875311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++++++|.+++ .++..+.+++.+..+|+..++.+|.|
T Consensus 218 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~--~~~~~~~v~~~~~~~g~~~~~~~D~v 271 (470)
T 1dxl_A 218 ------------------------AEIRKQFQRSLEKQGMKFKLKTKVVGVD--TSGDGVKLTVEPSAGGEQTIIEADVV 271 (470)
T ss_dssp ------------------------HHHHHHHHHHHHHSSCCEECSEEEEEEE--CSSSSEEEEEEESSSCCCEEEEESEE
T ss_pred ------------------------HHHHHHHHHHHHHcCCEEEeCCEEEEEE--EcCCeEEEEEEecCCCcceEEECCEE
Confidence 01122223333 2477 99999999997 33334666643222554345899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 272 v~a~G~~p~~ 281 (470)
T 1dxl_A 272 LVSAGRTPFT 281 (470)
T ss_dssp ECCCCEEECC
T ss_pred EECCCCCcCC
Confidence 9999988754
No 186
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.22 E-value=7.6e-06 Score=78.35 Aligned_cols=103 Identities=17% Similarity=0.215 Sum_probs=72.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... . +.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d------------------------------- 238 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG------G--MD------------------------------- 238 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS------S--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc------c--CC-------------------------------
Confidence 36899999999999999999999999999998875311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.+.+.+ +.|+ ++.+++|.+++.+ +..+.+.+.+..+|+..++.+|.|
T Consensus 239 ------------------------~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~i~~D~V 292 (491)
T 3urh_A 239 ------------------------GEVAKQLQRMLTKQGIDFKLGAKVTGAVKS--GDGAKVTFEPVKGGEATTLDAEVV 292 (491)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEEE--TTEEEEEEEETTSCCCEEEEESEE
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEECCeEEEEEEe--CCEEEEEEEecCCCceEEEEcCEE
Confidence 11122222322 2477 9999999999854 345666644333364446899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 293 i~a~G~~p~~ 302 (491)
T 3urh_A 293 LIATGRKPST 302 (491)
T ss_dssp EECCCCEECC
T ss_pred EEeeCCccCC
Confidence 9999987654
No 187
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.22 E-value=6.6e-07 Score=84.75 Aligned_cols=35 Identities=23% Similarity=0.391 Sum_probs=32.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+++||+||||||||+++|+.|++.|++|+|||+..
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 37 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKE 37 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCC
Confidence 45899999999999999999999999999999973
No 188
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.20 E-value=1.1e-05 Score=76.98 Aligned_cols=105 Identities=14% Similarity=0.160 Sum_probs=70.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. .. +.
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~~--~~------------------------------- 219 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGG-----VG--ID------------------------------- 219 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSC-----SS--CC-------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCC-----cc--cC-------------------------------
Confidence 36899999999999999999999999999999875311 00 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.+.+.+ +.|+ ++++++|.+++.+++ ..+.+++.+..+++..++++|.|
T Consensus 220 ------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~~~~~~~~~~~i~~D~v 274 (474)
T 1zmd_A 220 ------------------------MEISKNFQRILQKQGFKFKLNTKVTGATKKSD-GKIDVSIEAASGGKAEVITCDVL 274 (474)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSEEEEEEEECTT-SCEEEEEEETTSCCCEEEEESEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCC-ceEEEEEEecCCCCceEEEcCEE
Confidence 11222233333 2478 999999999984322 22555533212233334899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 275 v~a~G~~p~~ 284 (474)
T 1zmd_A 275 LVCIGRRPFT 284 (474)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCcCC
Confidence 9999987654
No 189
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.20 E-value=5.7e-06 Score=78.56 Aligned_cols=100 Identities=16% Similarity=0.074 Sum_probs=70.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . +.+ .+.
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~------~--~~~--------------~~~------------- 210 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF------Q--FDP--------------LLS------------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T--SCH--------------HHH-------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc------c--cCH--------------HHH-------------
Confidence 35899999999999999999999999999999865310 0 000 000
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
..+.+.|. +.|+ ++.+++|.+++.+++ .+.++ +++|+. ++.+|.||
T Consensus 211 ------------------------~~l~~~l~---~~gv~i~~~~~v~~i~~~~~--~~~v~---~~~G~~-~i~~D~vv 257 (463)
T 2r9z_A 211 ------------------------ATLAENMH---AQGIETHLEFAVAALERDAQ--GTTLV---AQDGTR-LEGFDSVI 257 (463)
T ss_dssp ------------------------HHHHHHHH---HTTCEEESSCCEEEEEEETT--EEEEE---ETTCCE-EEEESEEE
T ss_pred ------------------------HHHHHHHH---HCCCEEEeCCEEEEEEEeCC--eEEEE---EeCCcE-EEEcCEEE
Confidence 11222222 2477 999999999985433 36665 567772 48999999
Q ss_pred eecCCcccc
Q 035933 166 AADGSRSSV 174 (405)
Q Consensus 166 ~AdG~~S~v 174 (405)
.|+|..+..
T Consensus 258 ~a~G~~p~~ 266 (463)
T 2r9z_A 258 WAVGRAPNT 266 (463)
T ss_dssp ECSCEEESC
T ss_pred ECCCCCcCC
Confidence 999988755
No 190
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.19 E-value=1.2e-06 Score=82.85 Aligned_cols=37 Identities=22% Similarity=0.321 Sum_probs=34.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
..+||+||||||||+++|..|++.|++|+|||+.+.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~ 157 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRM 157 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCC
Confidence 3579999999999999999999999999999998764
No 191
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.19 E-value=8.1e-06 Score=78.12 Aligned_cols=102 Identities=15% Similarity=0.123 Sum_probs=71.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+... +.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--------~d------------------------------- 214 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL--------QD------------------------------- 214 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC--------CC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc--------CC-------------------------------
Confidence 368999999999999999999999999999998764110 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
..+.+.+.+.++..+ ++.+++|..++.+ +..+++++.+ .+|+..++.+|.||
T Consensus 215 ------------------------~~~~~~l~~~l~~~V~i~~~~~v~~i~~~--~~~v~v~~~~-~~G~~~~i~~D~Vi 267 (492)
T 3ic9_A 215 ------------------------EEMKRYAEKTFNEEFYFDAKARVISTIEK--EDAVEVIYFD-KSGQKTTESFQYVL 267 (492)
T ss_dssp ------------------------HHHHHHHHHHHHTTSEEETTCEEEEEEEC--SSSEEEEEEC-TTCCEEEEEESEEE
T ss_pred ------------------------HHHHHHHHHHHhhCcEEEECCEEEEEEEc--CCEEEEEEEe-CCCceEEEECCEEE
Confidence 011222222222126 8899999999843 3356665321 36754569999999
Q ss_pred eecCCcccc
Q 035933 166 AADGSRSSV 174 (405)
Q Consensus 166 ~AdG~~S~v 174 (405)
.|.|.....
T Consensus 268 ~a~G~~p~~ 276 (492)
T 3ic9_A 268 AATGRKANV 276 (492)
T ss_dssp ECSCCEESC
T ss_pred EeeCCccCC
Confidence 999987654
No 192
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.19 E-value=5.8e-07 Score=86.11 Aligned_cols=34 Identities=26% Similarity=0.275 Sum_probs=32.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
++||+||||||||+++|+.|++.|++|+||||.+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 4899999999999999999999999999999964
No 193
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.18 E-value=1e-06 Score=80.95 Aligned_cols=35 Identities=37% Similarity=0.434 Sum_probs=33.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
+||+|||||++|+++|..|++.|.+|+|+|+++.+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 69999999999999999999999999999998764
No 194
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.18 E-value=1.4e-06 Score=83.67 Aligned_cols=39 Identities=36% Similarity=0.528 Sum_probs=35.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPT 44 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~ 44 (405)
..+||+|||||++|+++|+.|++.|++|+|+|+++.+..
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg 70 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGG 70 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCC
Confidence 357999999999999999999999999999999976543
No 195
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.17 E-value=1.7e-06 Score=81.49 Aligned_cols=39 Identities=10% Similarity=0.142 Sum_probs=35.6
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
.+.+||+|||||++|+++|..|++.|++|+|+|+++.+.
T Consensus 4 ~~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 4 DEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 346899999999999999999999999999999987654
No 196
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.17 E-value=1.3e-05 Score=71.91 Aligned_cols=101 Identities=16% Similarity=0.134 Sum_probs=68.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.... .
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~------------------------------- 183 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA----------E------------------------------- 183 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC----------C-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc----------C-------------------------------
Confidence 46899999999999999999999999999998764210 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCC-CceeEEeeeE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRT-DVIIDVVGDL 163 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~-g~~~~~~~d~ 163 (405)
..+.+.|.+.+ +.|+ ++++++|.++..+. +....|++.+..+ |+..++.+|.
T Consensus 184 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~~g~~~~i~~D~ 238 (320)
T 1trb_A 184 ------------------------KILIKRLMDKVENGNIILHTNRTLEEVTGDQ-MGVTGVRLRDTQNSDNIESLDVAG 238 (320)
T ss_dssp ------------------------HHHHHHHHHHHHTSSEEEECSCEEEEEEECS-SSEEEEEEECCTTCCCCEEEECSE
T ss_pred ------------------------HHHHHHHHHhcccCCeEEEcCceeEEEEcCC-CceEEEEEEeccCCCceEEEEcCE
Confidence 01111222222 3588 99999999997432 2222244332222 5445689999
Q ss_pred EEeecCCccc
Q 035933 164 LVAADGSRSS 173 (405)
Q Consensus 164 vV~AdG~~S~ 173 (405)
||.|.|....
T Consensus 239 vv~a~G~~p~ 248 (320)
T 1trb_A 239 LFVAIGHSPN 248 (320)
T ss_dssp EEECSCEEES
T ss_pred EEEEeCCCCC
Confidence 9999997654
No 197
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.17 E-value=1.6e-06 Score=83.77 Aligned_cols=37 Identities=24% Similarity=0.261 Sum_probs=34.3
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+.++||+|||||+||+++|+.|++.|++|+|||+.+.
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4568999999999999999999999999999999874
No 198
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.16 E-value=1.4e-06 Score=82.01 Aligned_cols=40 Identities=15% Similarity=0.146 Sum_probs=36.1
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 4 RMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 4 ~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
|++.+||+|||||++|+++|..|++.|.+|+|+||++...
T Consensus 17 ~~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 17 QGEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYG 56 (475)
T ss_dssp CCCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 4456899999999999999999999999999999998653
No 199
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.15 E-value=4.6e-06 Score=79.08 Aligned_cols=98 Identities=18% Similarity=0.236 Sum_probs=69.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . +.
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~------------------------------- 211 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP------T--YD------------------------------- 211 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST------T--SC-------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc------c--cC-------------------------------
Confidence 36899999999999999999999999999999875311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++.+++|.+++ . + .++++ .++|+..++.+|.|
T Consensus 212 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~--~-~-~v~v~---~~~G~~~~i~~D~v 260 (458)
T 1lvl_A 212 ------------------------SELTAPVAESLKKLGIALHLGHSVEGYE--N-G-CLLAN---DGKGGQLRLEADRV 260 (458)
T ss_dssp ------------------------HHHHHHHHHHHHHHTCEEETTCEEEEEE--T-T-EEEEE---CSSSCCCEECCSCE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEECCEEEEEE--e-C-CEEEE---ECCCceEEEECCEE
Confidence 01111222222 2477 99999999987 4 2 25544 34564345899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|+|.....
T Consensus 261 v~a~G~~p~~ 270 (458)
T 1lvl_A 261 LVAVGRRPRT 270 (458)
T ss_dssp EECCCEEECC
T ss_pred EECcCCCcCC
Confidence 9999987654
No 200
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.15 E-value=2.3e-06 Score=77.44 Aligned_cols=35 Identities=26% Similarity=0.323 Sum_probs=32.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
+||+|||||+||+.+|+.|++.|.+|+|+|+++..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 69999999999999999999999999999998743
No 201
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.14 E-value=1.5e-06 Score=83.37 Aligned_cols=34 Identities=26% Similarity=0.451 Sum_probs=32.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
++||+||||||||+++|..|++.|++|+|||+..
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999984
No 202
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.13 E-value=9.1e-06 Score=75.89 Aligned_cols=99 Identities=18% Similarity=0.215 Sum_probs=71.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. + .+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~-------------------~------~~~------------- 184 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLV-------------------R------VLG------------- 184 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSH-------------------H------HHC-------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccch-------------------h------hcC-------------
Confidence 46899999999999999999999999999999875310 0 000
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.+.+.+ +.|+ ++++++|.+++. ++....|+ +++|+. +.+|.|
T Consensus 185 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~~~v~---~~dg~~--i~aD~V 233 (410)
T 3ef6_A 185 ------------------------RRIGAWLRGLLTELGVQVELGTGVVGFSG--EGQLEQVM---ASDGRS--FVADSA 233 (410)
T ss_dssp ------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEC--SSSCCEEE---ETTSCE--EECSEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEec--cCcEEEEE---ECCCCE--EEcCEE
Confidence 11222333333 2477 999999999873 33333455 668875 899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|..+..
T Consensus 234 v~a~G~~p~~ 243 (410)
T 3ef6_A 234 LICVGAEPAD 243 (410)
T ss_dssp EECSCEEECC
T ss_pred EEeeCCeecH
Confidence 9999997653
No 203
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.11 E-value=1.1e-05 Score=76.85 Aligned_cols=102 Identities=13% Similarity=0.066 Sum_probs=70.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. . +.+..
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d~~~---------------------------- 228 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR------K--FDECI---------------------------- 228 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT------T--SCHHH----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc------c--cCHHH----------------------------
Confidence 36899999999999999999999999999999865311 0 00000
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
...+.+.|.+ .|+ ++++++|.+++.++++..+.++ +++|+ .++.+|.||
T Consensus 229 -----------------------~~~l~~~l~~---~Gv~i~~~~~v~~i~~~~~~~~~~v~---~~~G~-~~i~~D~vv 278 (479)
T 2hqm_A 229 -----------------------QNTITDHYVK---EGINVHKLSKIVKVEKNVETDKLKIH---MNDSK-SIDDVDELI 278 (479)
T ss_dssp -----------------------HHHHHHHHHH---HTCEEECSCCEEEEEECC-CCCEEEE---ETTSC-EEEEESEEE
T ss_pred -----------------------HHHHHHHHHh---CCeEEEeCCEEEEEEEcCCCcEEEEE---ECCCc-EEEEcCEEE
Confidence 0122222322 477 9999999999753332235555 56773 248999999
Q ss_pred eecCCcccc
Q 035933 166 AADGSRSSV 174 (405)
Q Consensus 166 ~AdG~~S~v 174 (405)
.|.|.....
T Consensus 279 ~a~G~~p~~ 287 (479)
T 2hqm_A 279 WTIGRKSHL 287 (479)
T ss_dssp ECSCEEECC
T ss_pred ECCCCCCcc
Confidence 999987765
No 204
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.10 E-value=1.6e-05 Score=75.65 Aligned_cols=102 Identities=15% Similarity=0.201 Sum_probs=69.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. . +.
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d------------------------------- 214 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP------T--LD------------------------------- 214 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T--SC-------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc------c--CC-------------------------------
Confidence 36899999999999999999999999999999865311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC--CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL--PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~--~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 163 (405)
..+.+.|.+.+ +.|+ ++++++|.+++.+ +..+.+.+. ..+|+..++++|.
T Consensus 215 ------------------------~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~--~~~~~v~~~-~~~g~~~~i~~D~ 267 (468)
T 2qae_A 215 ------------------------EDVTNALVGALAKNEKMKFMTSTKVVGGTNN--GDSVSLEVE-GKNGKRETVTCEA 267 (468)
T ss_dssp ------------------------HHHHHHHHHHHHHHTCCEEECSCEEEEEEEC--SSSEEEEEE-CC---EEEEEESE
T ss_pred ------------------------HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEc--CCeEEEEEE-cCCCceEEEECCE
Confidence 11122233322 2477 9999999999843 334555532 1256434589999
Q ss_pred EEeecCCcccc
Q 035933 164 LVAADGSRSSV 174 (405)
Q Consensus 164 vV~AdG~~S~v 174 (405)
||.|.|..+..
T Consensus 268 vv~a~G~~p~~ 278 (468)
T 2qae_A 268 LLVSVGRRPFT 278 (468)
T ss_dssp EEECSCEEECC
T ss_pred EEECCCcccCC
Confidence 99999988754
No 205
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.08 E-value=2.3e-05 Score=73.33 Aligned_cols=99 Identities=17% Similarity=0.227 Sum_probs=71.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+... . +.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~-----~--~~------------------------------- 193 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR-----V--AG------------------------------- 193 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----T--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh-----h--cC-------------------------------
Confidence 468999999999999999999999999999998763110 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeE-EEEEeecCCCceeEEeeeE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTV-NVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v-~v~~~~~~~g~~~~~~~d~ 163 (405)
..+.+.+.+.+ +.|+ ++++++|.+++. ++..+ .|+ +++|+. +.+|.
T Consensus 194 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~v~~v~---l~dG~~--i~aD~ 242 (415)
T 3lxd_A 194 ------------------------EALSEFYQAEHRAHGVDLRTGAAMDCIEG--DGTKVTGVR---MQDGSV--IPADI 242 (415)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEEETCCEEEEEE--SSSBEEEEE---ESSSCE--EECSE
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEECCEEEEEEe--cCCcEEEEE---eCCCCE--EEcCE
Confidence 12222333333 2477 999999999974 32333 455 668875 89999
Q ss_pred EEeecCCcccc
Q 035933 164 LVAADGSRSSV 174 (405)
Q Consensus 164 vV~AdG~~S~v 174 (405)
||.|.|.....
T Consensus 243 Vv~a~G~~p~~ 253 (415)
T 3lxd_A 243 VIVGIGIVPCV 253 (415)
T ss_dssp EEECSCCEESC
T ss_pred EEECCCCccCh
Confidence 99999987654
No 206
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.08 E-value=1.5e-05 Score=75.80 Aligned_cols=101 Identities=18% Similarity=0.198 Sum_probs=70.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. . +.
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~~------------------------------- 211 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP------N--ED------------------------------- 211 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T--SC-------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc------c--cC-------------------------------
Confidence 36899999999999999999999999999999865311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.+.+.+ +.|+ ++++++|.+++.+ +..+.+.+. .+|+..++.+|.|
T Consensus 212 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~--~~~~~v~~~--~~g~~~~~~~D~v 263 (464)
T 2a8x_A 212 ------------------------ADVSKEIEKQFKKLGVTILTATKVESIADG--GSQVTVTVT--KDGVAQELKAEKV 263 (464)
T ss_dssp ------------------------HHHHHHHHHHHHHHTCEEECSCEEEEEEEC--SSCEEEEEE--SSSCEEEEEESEE
T ss_pred ------------------------HHHHHHHHHHHHHcCCEEEeCcEEEEEEEc--CCeEEEEEE--cCCceEEEEcCEE
Confidence 01111222222 2377 9999999999743 334555532 2564445899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 264 v~a~G~~p~~ 273 (464)
T 2a8x_A 264 LQAIGFAPNV 273 (464)
T ss_dssp EECSCEEECC
T ss_pred EECCCCCccC
Confidence 9999987654
No 207
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.07 E-value=1.2e-05 Score=76.83 Aligned_cols=101 Identities=18% Similarity=0.130 Sum_probs=70.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. . +.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~------~--~~------------------------------- 225 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ------G--AD------------------------------- 225 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST------T--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc------c--cC-------------------------------
Confidence 36899999999999999999999999999999865311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCC-CceeEEeeeE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRT-DVIIDVVGDL 163 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~-g~~~~~~~d~ 163 (405)
..+.+.|.+.+ +.|+ ++++++|.+++.++ ..+.+++.+... |+. +.+|.
T Consensus 226 ------------------------~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~~v~~~~~~~~g~~--~~~D~ 277 (482)
T 1ojt_A 226 ------------------------RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE--DGVYVTFEGANAPKEP--QRYDA 277 (482)
T ss_dssp ------------------------HHHHHHHHHHHGGGEEEEECSCEEEEEEEET--TEEEEEEESSSCCSSC--EEESC
T ss_pred ------------------------HHHHHHHHHHHHhcCCEEEECCEEEEEEEcC--CeEEEEEeccCCCceE--EEcCE
Confidence 11122233333 3478 99999999998533 345555321001 544 78999
Q ss_pred EEeecCCcccc
Q 035933 164 LVAADGSRSSV 174 (405)
Q Consensus 164 vV~AdG~~S~v 174 (405)
||.|.|.....
T Consensus 278 vv~a~G~~p~~ 288 (482)
T 1ojt_A 278 VLVAAGRAPNG 288 (482)
T ss_dssp EEECCCEEECG
T ss_pred EEECcCCCcCC
Confidence 99999988765
No 208
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.07 E-value=3.3e-06 Score=84.28 Aligned_cols=37 Identities=32% Similarity=0.584 Sum_probs=34.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.++||+||||||||+++|+.|+++|++|+|||+.+..
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4579999999999999999999999999999998753
No 209
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.07 E-value=2.8e-06 Score=78.63 Aligned_cols=35 Identities=17% Similarity=0.299 Sum_probs=31.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcC--CcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAG--WDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g--~~v~i~E~~~ 40 (405)
+++||+||||||||+++|..|++.| .+|+|+|+..
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 4589999999999999999999998 5689999875
No 210
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.05 E-value=2.3e-06 Score=80.92 Aligned_cols=37 Identities=27% Similarity=0.274 Sum_probs=33.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHH-c------CCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALIL-A------GWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~-~------g~~v~i~E~~~~~ 42 (405)
+.+||+||||||||+++|..|++ . |++|+|||+.+.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 46799999999999999999999 7 9999999998764
No 211
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.04 E-value=2e-05 Score=73.38 Aligned_cols=100 Identities=17% Similarity=0.226 Sum_probs=70.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+.+... . +.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~-----~--~~------------------------------- 183 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR-----V--VT------------------------------- 183 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT-----T--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh-----c--cC-------------------------------
Confidence 468999999999999999999999999999998653110 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++++++|.+++.++ +....|+ +++|+. +.+|.|
T Consensus 184 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~v~~V~---~~dG~~--i~aD~V 233 (404)
T 3fg2_P 184 ------------------------PEISSYFHDRHSGAGIRMHYGVRATEIAAEG-DRVTGVV---LSDGNT--LPCDLV 233 (404)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEEET-TEEEEEE---ETTSCE--EECSEE
T ss_pred ------------------------HHHHHHHHHHHHhCCcEEEECCEEEEEEecC-CcEEEEE---eCCCCE--EEcCEE
Confidence 12223333333 2577 99999999997532 2222355 668875 899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 234 v~a~G~~p~~ 243 (404)
T 3fg2_P 234 VVGVGVIPNV 243 (404)
T ss_dssp EECCCEEECC
T ss_pred EECcCCccCH
Confidence 9999987543
No 212
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=2.6e-06 Score=80.85 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=31.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
.++||+||||||||+++|..|++.|++|+|||+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 3589999999999999999999999999999993
No 213
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.02 E-value=2.4e-06 Score=81.80 Aligned_cols=32 Identities=16% Similarity=0.270 Sum_probs=30.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH-cCCcEEEEcc
Q 035933 7 KPKAIIVGGSIAGISCAKALIL-AGWDVVVIEK 38 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~-~g~~v~i~E~ 38 (405)
++||+||||||||+++|+.|++ .|++|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5899999999999999999999 9999999994
No 214
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.01 E-value=2.8e-05 Score=73.08 Aligned_cols=100 Identities=17% Similarity=0.225 Sum_probs=69.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. .. +.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-----~~--~~------------------------------- 190 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE-----RV--TA------------------------------- 190 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-----TT--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-----ch--hh-------------------------------
Confidence 46899999999999999999999999999999765311 00 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeE-EEEEeecCCCceeEEeeeE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTV-NVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v-~v~~~~~~~g~~~~~~~d~ 163 (405)
..+.+.+.+.+ +.|+ ++++++|.+++.+.+++.+ .|+ +++|+. +.+|.
T Consensus 191 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~---~~~G~~--i~~D~ 241 (431)
T 1q1r_A 191 ------------------------PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVL---CEDGTR--LPADL 241 (431)
T ss_dssp ------------------------HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEE---ETTSCE--EECSE
T ss_pred ------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEE---eCCCCE--EEcCE
Confidence 11112222222 2477 9999999998742022233 454 567765 89999
Q ss_pred EEeecCCccc
Q 035933 164 LVAADGSRSS 173 (405)
Q Consensus 164 vV~AdG~~S~ 173 (405)
||.|.|....
T Consensus 242 Vv~a~G~~p~ 251 (431)
T 1q1r_A 242 VIAGIGLIPN 251 (431)
T ss_dssp EEECCCEEEC
T ss_pred EEECCCCCcC
Confidence 9999998754
No 215
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.01 E-value=6.8e-05 Score=66.97 Aligned_cols=97 Identities=16% Similarity=0.031 Sum_probs=67.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~------------------------------- 181 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC----------A------------------------------- 181 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS----------C-------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC----------C-------------------------------
Confidence 46899999999999999999999999999998764310 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeE-EEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTV-NVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v-~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+ ..++ +++++++.++..++ ..+ .+.+.+..+|+..++.+|.|
T Consensus 182 ------------------------~~~~~~l~~--~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~v 233 (311)
T 2q0l_A 182 ------------------------PITLEHAKN--NDKIEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKRELVVPGF 233 (311)
T ss_dssp ------------------------HHHHHHHHT--CTTEEEETTEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEE
T ss_pred ------------------------HHHHHHHhh--CCCeEEEeCCEEEEEECCC--CcEeEEEEEecCCCceEEEecCEE
Confidence 001111211 2477 88999999987432 232 34443334676556899999
Q ss_pred EeecCCcc
Q 035933 165 VAADGSRS 172 (405)
Q Consensus 165 V~AdG~~S 172 (405)
|.|.|...
T Consensus 234 i~a~G~~p 241 (311)
T 2q0l_A 234 FIFVGYDV 241 (311)
T ss_dssp EECSCEEE
T ss_pred EEEecCcc
Confidence 99999654
No 216
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.01 E-value=3.7e-06 Score=80.44 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=31.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHH-cCCcEEEEcc
Q 035933 6 RKPKAIIVGGSIAGISCAKALIL-AGWDVVVIEK 38 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~-~g~~v~i~E~ 38 (405)
.++||+||||||||+++|+.|++ .|++|+|||+
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 35899999999999999999999 9999999994
No 217
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.00 E-value=3.5e-05 Score=73.83 Aligned_cols=100 Identities=13% Similarity=0.106 Sum_probs=70.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. . +.
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d------------------------------- 216 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR------K--FD------------------------------- 216 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT------T--SC-------------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc------c--cc-------------------------------
Confidence 36899999999999999999999999999999865311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++++++|.+++.+++ ..+.++ +++|+. ++.+|.|
T Consensus 217 ------------------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~v~---~~~g~~-~~~~D~v 267 (500)
T 1onf_A 217 ------------------------ESVINVLENDMKKNNINIVTFADVVEIKKVSD-KNLSIH---LSDGRI-YEHFDHV 267 (500)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEESST-TCEEEE---ETTSCE-EEEESEE
T ss_pred ------------------------hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC-ceEEEE---ECCCcE-EEECCEE
Confidence 01111222222 2477 999999999975332 235555 557764 4899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 268 i~a~G~~p~~ 277 (500)
T 1onf_A 268 IYCVGRSPDT 277 (500)
T ss_dssp EECCCBCCTT
T ss_pred EECCCCCcCC
Confidence 9999987655
No 218
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.99 E-value=2.6e-05 Score=75.18 Aligned_cols=100 Identities=11% Similarity=0.148 Sum_probs=70.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccccee
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRAV 87 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (405)
.+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. . +.
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~------~--~~-------------------------------- 254 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL------I--KD-------------------------------- 254 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT------C--CS--------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc------c--cc--------------------------------
Confidence 6899999999999999999999999999999875310 0 00
Q ss_pred cCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCe--EEEEEeecCCCceeEEeeeE
Q 035933 88 DREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKST--VNVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~--v~v~~~~~~~g~~~~~~~d~ 163 (405)
..+.+.|.+.+ +.|+ ++++++|.+++.++++.. +.|+ +++|+ .++.+|.
T Consensus 255 -----------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~---~~~G~-~~i~aD~ 307 (523)
T 1mo9_A 255 -----------------------NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAM---TPNGE-MRIETDF 307 (523)
T ss_dssp -----------------------HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEE---ETTEE-EEEECSC
T ss_pred -----------------------HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEE---ECCCc-EEEEcCE
Confidence 11122233333 2477 999999999985333211 4555 55665 2489999
Q ss_pred EEeecCCcccc
Q 035933 164 LVAADGSRSSV 174 (405)
Q Consensus 164 vV~AdG~~S~v 174 (405)
||.|.|..+..
T Consensus 308 Vv~A~G~~p~~ 318 (523)
T 1mo9_A 308 VFLGLGEQPRS 318 (523)
T ss_dssp EEECCCCEECC
T ss_pred EEECcCCccCC
Confidence 99999998765
No 219
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.98 E-value=4.1e-05 Score=73.14 Aligned_cols=99 Identities=19% Similarity=0.132 Sum_probs=71.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc---CCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccc
Q 035933 7 KPKAIIVGGSIAGISCAKALILA---GWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQ 83 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~---g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (405)
..+|+|||||+.|+-+|..|++. |.+|+++|+.+.+.. . +.
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~------~--~d---------------------------- 230 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR------G--FD---------------------------- 230 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST------T--SC----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc------c--cC----------------------------
Confidence 36899999999999999999999 999999999875310 0 00
Q ss_pred cceecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEee
Q 035933 84 NRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVG 161 (405)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~ 161 (405)
..+.+.|.+.+ +.|+ ++++++|.+++.+++ ..+.|+ +++|+. +.+
T Consensus 231 ---------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~~v~---~~~G~~--i~~ 277 (490)
T 1fec_A 231 ---------------------------SELRKQLTEQLRANGINVRTHENPAKVTKNAD-GTRHVV---FESGAE--ADY 277 (490)
T ss_dssp ---------------------------HHHHHHHHHHHHHTTEEEEETCCEEEEEECTT-SCEEEE---ETTSCE--EEE
T ss_pred ---------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEEEEE---ECCCcE--EEc
Confidence 11122333333 3588 999999999985332 335565 567764 899
Q ss_pred eEEEeecCCcccc
Q 035933 162 DLLVAADGSRSSV 174 (405)
Q Consensus 162 d~vV~AdG~~S~v 174 (405)
|.||.|.|.....
T Consensus 278 D~vv~a~G~~p~~ 290 (490)
T 1fec_A 278 DVVMLAIGRVPRS 290 (490)
T ss_dssp SEEEECSCEEESC
T ss_pred CEEEEccCCCcCc
Confidence 9999999987654
No 220
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.98 E-value=5.5e-06 Score=83.13 Aligned_cols=36 Identities=25% Similarity=0.444 Sum_probs=33.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.+||+||||||||+++|..|+++|++|+|||+.+..
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 479999999999999999999999999999998764
No 221
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.98 E-value=2.9e-05 Score=73.86 Aligned_cols=98 Identities=22% Similarity=0.284 Sum_probs=70.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 7 KPKAIIVGGSIAGISCAKALILA-GWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~-g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
..+|+|||+|++|+-+|..|++. |.+|+++|+.+.+.. .. +.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~-----~~--~~------------------------------ 201 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP-----GF--TS------------------------------ 201 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST-----TT--SC------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc-----cc--cC------------------------------
Confidence 36899999999999999999999 999999999865311 00 00
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeE
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~ 163 (405)
..+.+.|.+.+ +.|+ ++.+++|.+++. ++..+++. +.+|+. +.+|.
T Consensus 202 -------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~--~~~~v~v~---~~~g~~--i~aD~ 249 (472)
T 3iwa_A 202 -------------------------KSLSQMLRHDLEKNDVVVHTGEKVVRLEG--ENGKVARV---ITDKRT--LDADL 249 (472)
T ss_dssp -------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEE--SSSBEEEE---EESSCE--EECSE
T ss_pred -------------------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEc--cCCeEEEE---EeCCCE--EEcCE
Confidence 12223333333 2477 999999999974 33455555 457765 89999
Q ss_pred EEeecCCccc
Q 035933 164 LVAADGSRSS 173 (405)
Q Consensus 164 vV~AdG~~S~ 173 (405)
||.|.|....
T Consensus 250 Vv~a~G~~p~ 259 (472)
T 3iwa_A 250 VILAAGVSPN 259 (472)
T ss_dssp EEECSCEEEC
T ss_pred EEECCCCCcC
Confidence 9999999754
No 222
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=97.98 E-value=3.3e-05 Score=69.83 Aligned_cols=98 Identities=16% Similarity=0.114 Sum_probs=68.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+....
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------------------------------------------
Confidence 46899999999999999999999999999998865310
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
. ..+.+.|.+ ..|+ ++.+++|.+++.+. +....|++.+..+|+..++.+|.||
T Consensus 211 ----~-------------------~~~~~~l~~--~~gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~g~~~~i~~D~vi 264 (338)
T 3itj_A 211 ----S-------------------TIMQKRAEK--NEKIEILYNTVALEAKGDG-KLLNALRIKNTKKNEETDLPVSGLF 264 (338)
T ss_dssp ----C-------------------HHHHHHHHH--CTTEEEECSEEEEEEEESS-SSEEEEEEEETTTTEEEEEECSEEE
T ss_pred ----C-------------------HHHHHHHHh--cCCeEEeecceeEEEEccc-CcEEEEEEEECCCCceEEEEeCEEE
Confidence 0 111112211 1377 89999999998432 2233355544445655569999999
Q ss_pred eecCCcc
Q 035933 166 AADGSRS 172 (405)
Q Consensus 166 ~AdG~~S 172 (405)
.|.|...
T Consensus 265 ~a~G~~p 271 (338)
T 3itj_A 265 YAIGHTP 271 (338)
T ss_dssp ECSCEEE
T ss_pred EEeCCCC
Confidence 9999754
No 223
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.98 E-value=2.9e-05 Score=74.43 Aligned_cols=98 Identities=16% Similarity=0.150 Sum_probs=70.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. . +.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d------------------------------- 222 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP------Y--ED------------------------------- 222 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC------C--SS-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc------c--cC-------------------------------
Confidence 36899999999999999999999999999999865311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++.+++|.+++.+ +..+.++ +.+|+. +++|.|
T Consensus 223 ------------------------~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~--~~~v~v~---~~~g~~--i~aD~V 271 (499)
T 1xdi_A 223 ------------------------ADAALVLEESFAERGVRLFKNARAASVTRT--GAGVLVT---MTDGRT--VEGSHA 271 (499)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEC--SSSEEEE---ETTSCE--EEESEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEe--CCEEEEE---ECCCcE--EEcCEE
Confidence 01122222222 2477 9999999999843 3346655 556665 899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|..+..
T Consensus 272 v~a~G~~p~~ 281 (499)
T 1xdi_A 272 LMTIGSVPNT 281 (499)
T ss_dssp EECCCEEECC
T ss_pred EECCCCCcCC
Confidence 9999998754
No 224
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.97 E-value=3.4e-05 Score=71.89 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=67.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. .. +.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~~--~~------------------------------- 186 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS-----RA--AP------------------------------- 186 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----TT--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-----cc--cC-------------------------------
Confidence 47999999999999999999999999999999875311 00 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.+.+.+ +.|+ ++.+++|.+++ ++ .|+ +++|+. +.+|.|
T Consensus 187 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~----~v~---~~~g~~--i~~D~v 231 (408)
T 2gqw_A 187 ------------------------ATLADFVARYHAAQGVDLRFERSVTGSV--DG----VVL---LDDGTR--IAADMV 231 (408)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEEESCCEEEEE--TT----EEE---ETTSCE--EECSEE
T ss_pred ------------------------HHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC----EEE---ECCCCE--EEcCEE
Confidence 11112222222 2477 99999999987 22 333 557765 899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 232 i~a~G~~p~~ 241 (408)
T 2gqw_A 232 VVGIGVLAND 241 (408)
T ss_dssp EECSCEEECC
T ss_pred EECcCCCccH
Confidence 9999987543
No 225
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.97 E-value=7.7e-05 Score=66.57 Aligned_cols=97 Identities=12% Similarity=0.076 Sum_probs=68.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~------------------------------- 182 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA----------D------------------------------- 182 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS----------C-------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc----------c-------------------------------
Confidence 36899999999999999999999999999998765200 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeE-EEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTV-NVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v-~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+ ..++ ++.++++.++..+ +..+ .+++.+..+|+..++.+|.|
T Consensus 183 ------------------------~~~~~~l~~--~~gv~v~~~~~v~~i~~~--~~~v~~v~~~~~~~g~~~~i~~D~v 234 (310)
T 1fl2_A 183 ------------------------QVLQDKLRS--LKNVDIILNAQTTEVKGD--GSKVVGLEYRDRVSGDIHNIELAGI 234 (310)
T ss_dssp ------------------------HHHHHHHHT--CTTEEEESSEEEEEEEES--SSSEEEEEEEETTTCCEEEEECSEE
T ss_pred ------------------------HHHHHHHhh--CCCeEEecCCceEEEEcC--CCcEEEEEEEECCCCcEEEEEcCEE
Confidence 011112221 1477 8899999998743 2333 45544434566567899999
Q ss_pred EeecCCcc
Q 035933 165 VAADGSRS 172 (405)
Q Consensus 165 V~AdG~~S 172 (405)
|.|.|...
T Consensus 235 i~a~G~~p 242 (310)
T 1fl2_A 235 FVQIGLLP 242 (310)
T ss_dssp EECSCEEE
T ss_pred EEeeCCcc
Confidence 99999654
No 226
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.96 E-value=6.7e-05 Score=71.61 Aligned_cols=103 Identities=22% Similarity=0.278 Sum_probs=70.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++++..... . +.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~-------~--~d------------------------------- 226 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR-------G--FD------------------------------- 226 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST-------T--SC-------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc-------c--cC-------------------------------
Confidence 3589999999999999999999999999999842210 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
.++.+.+.+.+ +.|+ ++.+++|.+++..+ +..+.+++.+..+++..++.+|.|
T Consensus 227 ------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~-~~~~~v~~~~~~~~~~~~~~~D~v 281 (483)
T 3dgh_A 227 ------------------------QQMAELVAASMEERGIPFLRKTVPLSVEKQD-DGKLLVKYKNVETGEESEDVYDTV 281 (483)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCCEEETEEEEEEEECT-TSCEEEEEEETTTCCEEEEEESEE
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CCcEEEEEecCCCCceeEEEcCEE
Confidence 01122223333 2477 99999999998533 334566654444455556899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 282 i~a~G~~p~~ 291 (483)
T 3dgh_A 282 LWAIGRKGLV 291 (483)
T ss_dssp EECSCEEECC
T ss_pred EECcccccCc
Confidence 9999986543
No 227
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.95 E-value=8.2e-05 Score=70.35 Aligned_cols=98 Identities=10% Similarity=0.114 Sum_probs=69.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+... . +.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----~--~d------------------------------- 188 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK-----Y--FD------------------------------- 188 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----T--CC-------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc-----c--CC-------------------------------
Confidence 368999999999999999999999999999998753110 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++.+++|.+++.. +..+.++ +++| ++++|.|
T Consensus 189 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~--~~~v~v~---~~~g---~i~aD~V 236 (452)
T 3oc4_A 189 ------------------------KEMVAEVQKSLEKQAVIFHFEETVLGIEET--ANGIVLE---TSEQ---EISCDSG 236 (452)
T ss_dssp ------------------------HHHHHHHHHHHHTTTEEEEETCCEEEEEEC--SSCEEEE---ESSC---EEEESEE
T ss_pred ------------------------HHHHHHHHHHHHHcCCEEEeCCEEEEEEcc--CCeEEEE---ECCC---EEEeCEE
Confidence 11223333333 3588 9999999999843 3345555 4455 3899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 237 v~A~G~~p~~ 246 (452)
T 3oc4_A 237 IFALNLHPQL 246 (452)
T ss_dssp EECSCCBCCC
T ss_pred EECcCCCCCh
Confidence 9999987543
No 228
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.95 E-value=2.2e-05 Score=74.85 Aligned_cols=97 Identities=20% Similarity=0.258 Sum_probs=67.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||++|+-+|..|++.|.+|+|+|+.+.+.. . +.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~------------------------------- 226 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT------I--YD------------------------------- 226 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS------S--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh------c--CC-------------------------------
Confidence 47999999999999999999999999999999864310 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++++++|.+++. ++....+. + ++. ++++|.|
T Consensus 227 ------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~--~~~v~~v~---~-~~~--~i~~D~v 274 (480)
T 3cgb_A 227 ------------------------GDMAEYIYKEADKHHIEILTNENVKAFKG--NERVEAVE---T-DKG--TYKADLV 274 (480)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEE--SSBEEEEE---E-TTE--EEECSEE
T ss_pred ------------------------HHHHHHHHHHHHHcCcEEEcCCEEEEEEc--CCcEEEEE---E-CCC--EEEcCEE
Confidence 11222333333 2477 999999999874 23222333 3 333 3899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|..+..
T Consensus 275 i~a~G~~p~~ 284 (480)
T 3cgb_A 275 LVSVGVKPNT 284 (480)
T ss_dssp EECSCEEESC
T ss_pred EECcCCCcCh
Confidence 9999987653
No 229
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.94 E-value=4.2e-05 Score=73.17 Aligned_cols=99 Identities=13% Similarity=0.162 Sum_probs=70.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc---CCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccc
Q 035933 7 KPKAIIVGGSIAGISCAKALILA---GWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQ 83 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~---g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 83 (405)
..+|+|||||+.|+-+|..|++. |.+|+|+|+.+.+.. . +.
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~------~--~d---------------------------- 234 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR------G--FD---------------------------- 234 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT------T--SC----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc------c--cC----------------------------
Confidence 36899999999999999999999 999999999865311 0 00
Q ss_pred cceecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEee
Q 035933 84 NRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVG 161 (405)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~ 161 (405)
..+.+.|.+.+ +.|+ ++++++|.+++.++ +..+.|+ +.+|+. +++
T Consensus 235 ---------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~-~~~~~v~---~~~G~~--i~~ 281 (495)
T 2wpf_A 235 ---------------------------ETIREEVTKQLTANGIEIMTNENPAKVSLNT-DGSKHVT---FESGKT--LDV 281 (495)
T ss_dssp ---------------------------HHHHHHHHHHHHHTTCEEEESCCEEEEEECT-TSCEEEE---ETTSCE--EEE
T ss_pred ---------------------------HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcC-CceEEEE---ECCCcE--EEc
Confidence 01112222222 2478 99999999997432 2335555 567764 899
Q ss_pred eEEEeecCCcccc
Q 035933 162 DLLVAADGSRSSV 174 (405)
Q Consensus 162 d~vV~AdG~~S~v 174 (405)
|.||.|.|.....
T Consensus 282 D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 282 DVVMMAIGRIPRT 294 (495)
T ss_dssp SEEEECSCEEECC
T ss_pred CEEEECCCCcccc
Confidence 9999999987654
No 230
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.94 E-value=5.8e-05 Score=72.17 Aligned_cols=98 Identities=18% Similarity=0.221 Sum_probs=68.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+.. .. +.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-----~~--~~------------------------------- 235 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA-----GY--YD------------------------------- 235 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-----TT--SC-------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh-----hH--HH-------------------------------
Confidence 46899999999999999999999999999999865311 00 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.+.+.+ +.|+ ++++++|.+++ .++....+. + +|+. +++|.|
T Consensus 236 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~~~v~~v~---~-~g~~--i~~D~V 283 (490)
T 2bc0_A 236 ------------------------RDLTDLMAKNMEEHGIQLAFGETVKEVA--GNGKVEKII---T-DKNE--YDVDMV 283 (490)
T ss_dssp ------------------------HHHHHHHHHHHHTTTCEEEETCCEEEEE--CSSSCCEEE---E-SSCE--EECSEE
T ss_pred ------------------------HHHHHHHHHHHHhCCeEEEeCCEEEEEE--cCCcEEEEE---E-CCcE--EECCEE
Confidence 11222333333 3588 99999999997 332222233 3 5654 899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 284 i~a~G~~p~~ 293 (490)
T 2bc0_A 284 ILAVGFRPNT 293 (490)
T ss_dssp EECCCEEECC
T ss_pred EECCCCCcCh
Confidence 9999987654
No 231
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.94 E-value=5.4e-06 Score=81.43 Aligned_cols=34 Identities=21% Similarity=0.356 Sum_probs=31.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
..+||+||||||||+++|..|++.|++|+|||+.
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 3589999999999999999999999999999984
No 232
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.94 E-value=5.7e-05 Score=72.02 Aligned_cols=104 Identities=13% Similarity=0.022 Sum_probs=69.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccccee
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRAV 87 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (405)
.+|+|||||+.|+-+|..|++.|.+|+++++.+.+.. . +.
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------~--~d-------------------------------- 227 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR------S--FD-------------------------------- 227 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------T--SC--------------------------------
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc------c--cC--------------------------------
Confidence 6899999999999999999999999999999765311 0 00
Q ss_pred cCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCce--eEEeeeE
Q 035933 88 DREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVI--IDVVGDL 163 (405)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~--~~~~~d~ 163 (405)
..+.+.+.+.+ +.|+ ++.+++|.+++.++++..+.+.+.+..+|+. .++.+|.
T Consensus 228 -----------------------~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~ 284 (478)
T 3dk9_A 228 -----------------------SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDC 284 (478)
T ss_dssp -----------------------HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESE
T ss_pred -----------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCE
Confidence 01112222222 2477 9999999999854333245555322222322 4589999
Q ss_pred EEeecCCcccc
Q 035933 164 LVAADGSRSSV 174 (405)
Q Consensus 164 vV~AdG~~S~v 174 (405)
||.|.|.....
T Consensus 285 vi~a~G~~p~~ 295 (478)
T 3dk9_A 285 LLWAIGRVPNT 295 (478)
T ss_dssp EEECSCEEESC
T ss_pred EEEeeccccCC
Confidence 99999986544
No 233
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.93 E-value=7.2e-06 Score=78.12 Aligned_cols=38 Identities=39% Similarity=0.595 Sum_probs=33.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRGPP 43 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~~~ 43 (405)
+.+||+|||||++|+++|+.|++.|+ +|+|+|+++.+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~g 41 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIG 41 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSB
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCC
Confidence 45899999999999999999999999 899999987653
No 234
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.93 E-value=5.1e-05 Score=73.97 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=32.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.+|+|||||+.|+-+|..|++.|.+|+++++.+..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~ 186 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQV 186 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCcc
Confidence 58999999999999999999999999999998753
No 235
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.93 E-value=9.8e-05 Score=70.55 Aligned_cols=103 Identities=16% Similarity=0.144 Sum_probs=71.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++++...... +.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~---------~d------------------------------- 224 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG---------FD------------------------------- 224 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT---------SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc---------CC-------------------------------
Confidence 35899999999999999999999999999998532100 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.+.+.+ +.|+ ++.++++.+++.. ++..+.+++.+..+|+..++.+|.|
T Consensus 225 ------------------------~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~-~~~~~~v~~~~~~~g~~~~~~~D~v 279 (488)
T 3dgz_A 225 ------------------------QQMSSLVTEHMESHGTQFLKGCVPSHIKKL-PTNQLQVTWEDHASGKEDTGTFDTV 279 (488)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEEETEEEEEEEEC-TTSCEEEEEEETTTTEEEEEEESEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEc-CCCcEEEEEEeCCCCeeEEEECCEE
Confidence 11122223333 2477 9999999998753 3344566654444466556899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 280 i~a~G~~p~~ 289 (488)
T 3dgz_A 280 LWAIGRVPET 289 (488)
T ss_dssp EECSCEEESC
T ss_pred EEcccCCccc
Confidence 9999987544
No 236
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.91 E-value=0.00014 Score=65.44 Aligned_cols=97 Identities=18% Similarity=0.205 Sum_probs=67.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~----------~------------------------------- 190 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA----------N------------------------------- 190 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS----------C-------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc----------c-------------------------------
Confidence 36899999999999999999999999999998764310 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
..+.+.|.+ ..++ +++++++.++.. ++....|.+.+..+|+..++.+|.||
T Consensus 191 ------------------------~~~~~~l~~--~~gv~i~~~~~v~~i~~--~~~v~~v~~~~~~~g~~~~i~~D~vi 242 (325)
T 2q7v_A 191 ------------------------KVAQARAFA--NPKMKFIWDTAVEEIQG--ADSVSGVKLRNLKTGEVSELATDGVF 242 (325)
T ss_dssp ------------------------HHHHHHHHT--CTTEEEECSEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred ------------------------hHHHHHHHh--cCCceEecCCceEEEcc--CCcEEEEEEEECCCCcEEEEEcCEEE
Confidence 000111111 2477 889999999974 33323455433346765568999999
Q ss_pred eecCCcc
Q 035933 166 AADGSRS 172 (405)
Q Consensus 166 ~AdG~~S 172 (405)
.|.|...
T Consensus 243 ~a~G~~p 249 (325)
T 2q7v_A 243 IFIGHVP 249 (325)
T ss_dssp ECSCEEE
T ss_pred EccCCCC
Confidence 9999654
No 237
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.90 E-value=9.5e-06 Score=82.03 Aligned_cols=38 Identities=29% Similarity=0.504 Sum_probs=34.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
..++|+|||||++||++|+.|+++|++|+|||+.+.+.
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 314 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCC
Confidence 35799999999999999999999999999999987754
No 238
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.90 E-value=9e-06 Score=80.70 Aligned_cols=38 Identities=29% Similarity=0.504 Sum_probs=34.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPP 43 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~ 43 (405)
..+||+||||||+|+++|+.|++.|++|+|+|+++.+.
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVG 143 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSB
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCC
Confidence 35799999999999999999999999999999987653
No 239
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.90 E-value=5.2e-05 Score=68.50 Aligned_cols=101 Identities=15% Similarity=0.067 Sum_probs=69.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.... .+..
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~----------~~~~---------------------------- 193 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA----------HEAS---------------------------- 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS----------CHHH----------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc----------cHHH----------------------------
Confidence 46899999999999999999999999999999764310 0000
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
...+.+.|. +.++ ++++++|.+++. ++....|++....+|+..++.+|.||
T Consensus 194 -----------------------~~~l~~~l~---~~gv~v~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~i~~D~vi 245 (335)
T 2zbw_A 194 -----------------------VKELMKAHE---EGRLEVLTPYELRRVEG--DERVRWAVVFHNQTQEELALEVDAVL 245 (335)
T ss_dssp -----------------------HHHHHHHHH---TTSSEEETTEEEEEEEE--SSSEEEEEEEETTTCCEEEEECSEEE
T ss_pred -----------------------HHHHHhccc---cCCeEEecCCcceeEcc--CCCeeEEEEEECCCCceEEEecCEEE
Confidence 011222222 2477 999999999984 33333454333336755568999999
Q ss_pred eecCCccc
Q 035933 166 AADGSRSS 173 (405)
Q Consensus 166 ~AdG~~S~ 173 (405)
.|.|....
T Consensus 246 ~a~G~~p~ 253 (335)
T 2zbw_A 246 ILAGYITK 253 (335)
T ss_dssp ECCCEEEE
T ss_pred EeecCCCC
Confidence 99997654
No 240
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.89 E-value=8.7e-06 Score=81.03 Aligned_cols=36 Identities=22% Similarity=0.302 Sum_probs=33.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.+||+||||||||+.+|..|++.|++|+|||+.+..
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 479999999999999999999999999999998764
No 241
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.89 E-value=4.6e-05 Score=72.41 Aligned_cols=96 Identities=14% Similarity=0.136 Sum_probs=68.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. +.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------~~------------------------------- 215 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR---------ED------------------------------- 215 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT---------SC-------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC---------CC-------------------------------
Confidence 36899999999999999999999999999999865310 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++.+++|.+++.+ +..+.++ ++ +. ++.+|.|
T Consensus 216 ------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~~~v~---~~-~~--~i~aD~V 263 (467)
T 1zk7_A 216 ------------------------PAIGEAVTAAFRAEGIEVLEHTQASQVAHM--DGEFVLT---TT-HG--ELRADKL 263 (467)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEETTCCEEEEEEE--TTEEEEE---ET-TE--EEEESEE
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEcCCEEEEEEEe--CCEEEEE---EC-Cc--EEEcCEE
Confidence 01112222222 2477 9999999999743 3345554 33 33 3899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|..+..
T Consensus 264 v~a~G~~p~~ 273 (467)
T 1zk7_A 264 LVATGRTPNT 273 (467)
T ss_dssp EECSCEEESC
T ss_pred EECCCCCcCC
Confidence 9999998764
No 242
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.89 E-value=3.2e-05 Score=70.94 Aligned_cols=34 Identities=35% Similarity=0.543 Sum_probs=32.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.+|+|||||++|+-+|..|++.|.+|+++|+.+.
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~ 177 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAM 177 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCe
Confidence 6899999999999999999999999999999865
No 243
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.88 E-value=6.5e-05 Score=71.04 Aligned_cols=98 Identities=13% Similarity=0.178 Sum_probs=68.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++|+.+.+.. .. +.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-----~~--~~------------------------------- 190 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY-----KY--FD------------------------------- 190 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT-----TT--SC-------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh-----hh--hh-------------------------------
Confidence 36899999999999999999999999999999865311 00 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEE-EEEeecCCCceeEEeeeE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVN-VKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~-v~~~~~~~g~~~~~~~d~ 163 (405)
..+.+.|.+.+ +.|+ ++++++|.+++.. ++.++ +. + +|+. +.+|.
T Consensus 191 ------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~--~~~v~~v~---~-~g~~--i~~D~ 238 (452)
T 2cdu_A 191 ------------------------KEFTDILAKDYEAHGVNLVLGSKVAAFEEV--DDEIITKT---L-DGKE--IKSDI 238 (452)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEEESSCEEEEEEE--TTEEEEEE---T-TSCE--EEESE
T ss_pred ------------------------hhHHHHHHHHHHHCCCEEEcCCeeEEEEcC--CCeEEEEE---e-CCCE--EECCE
Confidence 11222233333 2478 9999999999742 23443 33 3 5654 89999
Q ss_pred EEeecCCcccc
Q 035933 164 LVAADGSRSSV 174 (405)
Q Consensus 164 vV~AdG~~S~v 174 (405)
||.|.|.....
T Consensus 239 vv~a~G~~p~~ 249 (452)
T 2cdu_A 239 AILCIGFRPNT 249 (452)
T ss_dssp EEECCCEEECC
T ss_pred EEECcCCCCCH
Confidence 99999987654
No 244
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.86 E-value=9.9e-05 Score=70.29 Aligned_cols=101 Identities=17% Similarity=0.161 Sum_probs=70.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.+.. . +.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~------------------------------- 220 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP------A--VD------------------------------- 220 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------T--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc------c--cC-------------------------------
Confidence 36899999999999999999999999999999865310 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.+.+.+ +.|+ ++.+++|.+++.+ +..+.+.+.+ .+| ..++.+|.|
T Consensus 221 ------------------------~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~--~~~~~v~~~~-~~g-~~~~~~D~v 272 (476)
T 3lad_A 221 ------------------------EQVAKEAQKILTKQGLKILLGARVTGTEVK--NKQVTVKFVD-AEG-EKSQAFDKL 272 (476)
T ss_dssp ------------------------HHHHHHHHHHHHHTTEEEEETCEEEEEEEC--SSCEEEEEES-SSE-EEEEEESEE
T ss_pred ------------------------HHHHHHHHHHHHhCCCEEEECCEEEEEEEc--CCEEEEEEEe-CCC-cEEEECCEE
Confidence 11222233333 2478 9999999999853 3345555321 123 245899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 273 i~a~G~~p~~ 282 (476)
T 3lad_A 273 IVAVGRRPVT 282 (476)
T ss_dssp EECSCEEECC
T ss_pred EEeeCCcccC
Confidence 9999987654
No 245
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.86 E-value=0.00017 Score=65.07 Aligned_cols=99 Identities=18% Similarity=0.219 Sum_probs=68.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~----------~------------------------------- 197 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA----------S------------------------------- 197 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS----------C-------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc----------c-------------------------------
Confidence 46899999999999999999999999999999865310 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHH-HHHHhcCCCce-EEecceEEEEEEecCCCeE-EEEEeecCCCceeEEeeeE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLH-GLIYNTLPVEI-VFWGHLYLTFCISHDKSTV-NVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~-~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v-~v~~~~~~~g~~~~~~~d~ 163 (405)
..+. +.+ ...++ +++++++.++..+.+...+ .+.+.+..+|+..++.+|.
T Consensus 198 ------------------------~~~~~~~~---~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~ 250 (333)
T 1vdc_A 198 ------------------------KIMQQRAL---SNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSG 250 (333)
T ss_dssp ------------------------HHHHHHHH---TCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSE
T ss_pred ------------------------HHHHHHHH---hCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCE
Confidence 0001 111 13578 8899999999743321133 3554333356555689999
Q ss_pred EEeecCCccc
Q 035933 164 LVAADGSRSS 173 (405)
Q Consensus 164 vV~AdG~~S~ 173 (405)
||.|.|....
T Consensus 251 vi~a~G~~p~ 260 (333)
T 1vdc_A 251 LFFAIGHEPA 260 (333)
T ss_dssp EEECSCEEES
T ss_pred EEEEeCCccc
Confidence 9999996543
No 246
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.86 E-value=1.2e-05 Score=78.15 Aligned_cols=37 Identities=32% Similarity=0.371 Sum_probs=34.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
..+|++|||||++|+++|..|++.|++|+|+|+....
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~~ 42 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPS 42 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 4689999999999999999999999999999998753
No 247
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.85 E-value=0.00011 Score=66.02 Aligned_cols=98 Identities=16% Similarity=0.038 Sum_probs=67.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.... .
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~----------~------------------------------- 193 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC----------E------------------------------- 193 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS----------C-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC----------C-------------------------------
Confidence 36899999999999999999999999999998754210 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
..+.+.|. +.|+ +++++++.++..++ +....+.+.+..+|+..++.+|.||
T Consensus 194 ------------------------~~l~~~l~---~~gv~i~~~~~v~~i~~~~-~~v~~v~~~~~~~g~~~~i~~D~vi 245 (319)
T 3cty_A 194 ------------------------NAYVQEIK---KRNIPYIMNAQVTEIVGDG-KKVTGVKYKDRTTGEEKLIETDGVF 245 (319)
T ss_dssp ------------------------HHHHHHHH---HTTCCEECSEEEEEEEESS-SSEEEEEEEETTTCCEEEECCSEEE
T ss_pred ------------------------HHHHHHHh---cCCcEEEcCCeEEEEecCC-ceEEEEEEEEcCCCceEEEecCEEE
Confidence 00111122 2477 88999999987432 2122344333346765568999999
Q ss_pred eecCCccc
Q 035933 166 AADGSRSS 173 (405)
Q Consensus 166 ~AdG~~S~ 173 (405)
.|.|....
T Consensus 246 ~a~G~~p~ 253 (319)
T 3cty_A 246 IYVGLIPQ 253 (319)
T ss_dssp ECCCEEEC
T ss_pred EeeCCccC
Confidence 99997653
No 248
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.85 E-value=8e-05 Score=71.19 Aligned_cols=99 Identities=24% Similarity=0.251 Sum_probs=68.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH----cCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccc
Q 035933 7 KPKAIIVGGSIAGISCAKALIL----AGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTID 82 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~----~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (405)
..+|+|||||+.|+-+|..|++ .|.+|+++++.+.+. ++. +.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~-----~~~--l~--------------------------- 225 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM-----GKI--LP--------------------------- 225 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT-----TTT--SC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc-----ccc--CC---------------------------
Confidence 3689999999999999999987 488999999875421 000 00
Q ss_pred ccceecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEe
Q 035933 83 QNRAVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVV 160 (405)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~ 160 (405)
..+...+.+.+ +.|+ ++.+++|.+++.+ +..+.|+ +.+|+. +.
T Consensus 226 ----------------------------~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~--~~~~~v~---l~dG~~--i~ 270 (493)
T 1m6i_A 226 ----------------------------EYLSNWTMEKVRREGVKVMPNAIVQSVGVS--SGKLLIK---LKDGRK--VE 270 (493)
T ss_dssp ----------------------------HHHHHHHHHHHHTTTCEEECSCCEEEEEEE--TTEEEEE---ETTSCE--EE
T ss_pred ----------------------------HHHHHHHHHHHHhcCCEEEeCCEEEEEEec--CCeEEEE---ECCCCE--EE
Confidence 01112222222 3578 9999999999743 3345555 567765 89
Q ss_pred eeEEEeecCCcccc
Q 035933 161 GDLLVAADGSRSSV 174 (405)
Q Consensus 161 ~d~vV~AdG~~S~v 174 (405)
+|.||.|.|.....
T Consensus 271 aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 271 TDHIVAAVGLEPNV 284 (493)
T ss_dssp ESEEEECCCEEECC
T ss_pred CCEEEECCCCCccH
Confidence 99999999987643
No 249
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.85 E-value=7.6e-05 Score=70.84 Aligned_cols=101 Identities=16% Similarity=0.212 Sum_probs=70.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.+... . +.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------~-~d------------------------------- 213 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT------L-ED------------------------------- 213 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT------S-CC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC------C-CC-------------------------------
Confidence 368999999999999999999999999999998753110 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecC--CCceeEEeeeE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLR--TDVIIDVVGDL 163 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~--~g~~~~~~~d~ 163 (405)
..+.+.+.+.+. + ++.+++|.+++.+++ ..+.+. ++ +|+..++.+|.
T Consensus 214 ------------------------~~~~~~l~~~l~--v~i~~~~~v~~i~~~~~-~~v~v~---~~~~~G~~~~i~~D~ 263 (466)
T 3l8k_A 214 ------------------------QDIVNTLLSILK--LNIKFNSPVTEVKKIKD-DEYEVI---YSTKDGSKKSIFTNS 263 (466)
T ss_dssp ------------------------HHHHHHHHHHHC--CCEECSCCEEEEEEEET-TEEEEE---ECCTTSCCEEEEESC
T ss_pred ------------------------HHHHHHHHhcCE--EEEEECCEEEEEEEcCC-CcEEEE---EEecCCceEEEEcCE
Confidence 111122222222 5 888999999875431 456666 33 56655689999
Q ss_pred EEeecCCccccc
Q 035933 164 LVAADGSRSSVR 175 (405)
Q Consensus 164 vV~AdG~~S~vr 175 (405)
||.|.|......
T Consensus 264 vi~a~G~~p~~~ 275 (466)
T 3l8k_A 264 VVLAAGRRPVIP 275 (466)
T ss_dssp EEECCCEEECCC
T ss_pred EEECcCCCcccc
Confidence 999999876554
No 250
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.84 E-value=0.0001 Score=70.88 Aligned_cols=97 Identities=16% Similarity=0.170 Sum_probs=69.5
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccccee
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRAV 87 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (405)
.+++|||||+.|+=+|..+++.|.+|+|+++...... . +
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~~----------------------~-D------------------ 262 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLRG----------------------F-D------------------ 262 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSSTT----------------------S-C------------------
T ss_pred ceEEEECCCHHHHHHHHHHHhcCCeEEEecccccccc----------------------c-c------------------
Confidence 6899999999999999999999999999987532100 0 0
Q ss_pred cCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 88 DREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
.++...|.+.+ ..|+ ++.++.+..++.. +..+.|. +.++.. +.+|.|+
T Consensus 263 -----------------------~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~--~~~~~v~---~~~~~~--~~~D~vL 312 (542)
T 4b1b_A 263 -----------------------QQCAVKVKLYMEEQGVMFKNGILPKKLTKM--DDKILVE---FSDKTS--ELYDTVL 312 (542)
T ss_dssp -----------------------HHHHHHHHHHHHHTTCEEEETCCEEEEEEE--TTEEEEE---ETTSCE--EEESEEE
T ss_pred -----------------------hhHHHHHHHHHHhhcceeecceEEEEEEec--CCeEEEE---EcCCCe--EEEEEEE
Confidence 11222233333 2477 8899999998844 4466666 556665 7899999
Q ss_pred eecCCccccc
Q 035933 166 AADGSRSSVR 175 (405)
Q Consensus 166 ~AdG~~S~vr 175 (405)
.|.|+...+-
T Consensus 313 vAvGR~Pnt~ 322 (542)
T 4b1b_A 313 YAIGRKGDID 322 (542)
T ss_dssp ECSCEEESCG
T ss_pred EcccccCCcc
Confidence 9999876653
No 251
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.83 E-value=0.0002 Score=68.84 Aligned_cols=103 Identities=20% Similarity=0.248 Sum_probs=68.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCcccccccee
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRAV 87 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (405)
.+|+|||||+.|+-+|..|++.|.+|+|+++..... . +.
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~-------~--~d-------------------------------- 249 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR-------G--FD-------------------------------- 249 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST-------T--SC--------------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc-------c--CC--------------------------------
Confidence 579999999999999999999999999999842110 0 00
Q ss_pred cCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecC--CCeEEEEEeecCCCceeEEeeeE
Q 035933 88 DREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHD--KSTVNVKAKNLRTDVIIDVVGDL 163 (405)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~--~~~v~v~~~~~~~g~~~~~~~d~ 163 (405)
.++.+.+.+.+ +.|+ ++.++++..+...++ ...+.+++...+.++..++.+|.
T Consensus 250 -----------------------~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~ 306 (519)
T 3qfa_A 250 -----------------------QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNT 306 (519)
T ss_dssp -----------------------HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESE
T ss_pred -----------------------HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCE
Confidence 11122222322 2477 888988888765432 24555554322233434578999
Q ss_pred EEeecCCcccc
Q 035933 164 LVAADGSRSSV 174 (405)
Q Consensus 164 vV~AdG~~S~v 174 (405)
||.|.|.....
T Consensus 307 vi~a~G~~p~~ 317 (519)
T 3qfa_A 307 VMLAIGRDACT 317 (519)
T ss_dssp EEECSCEEESC
T ss_pred EEEecCCcccC
Confidence 99999987544
No 252
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.82 E-value=1.4e-05 Score=75.65 Aligned_cols=37 Identities=30% Similarity=0.379 Sum_probs=33.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcC--CcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAG--WDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g--~~v~i~E~~~~~ 42 (405)
..+||+||||||||+.+|..|++.| ++|+|||+.+.+
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 3579999999999999999999998 999999998764
No 253
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.80 E-value=1.6e-05 Score=82.85 Aligned_cols=36 Identities=33% Similarity=0.519 Sum_probs=33.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~~ 42 (405)
.+||+||||||||+++|..|++.|+ +|+|||+.+.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 4799999999999999999999999 79999998654
No 254
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.80 E-value=1.2e-05 Score=77.80 Aligned_cols=36 Identities=31% Similarity=0.304 Sum_probs=32.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHH-cCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALIL-AGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~-~g~~v~i~E~~~~ 41 (405)
..||+||||||+||+.+|..|++ .|++|+|+|+.+.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 36899999999999999999998 6899999999865
No 255
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.79 E-value=0.00019 Score=64.25 Aligned_cols=97 Identities=14% Similarity=0.112 Sum_probs=69.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.... . .
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------~-------------~----------------- 193 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA----------Q-------------P----------------- 193 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS----------C-------------H-----------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc----------C-------------H-----------------
Confidence 46899999999999999999999999999999865310 0 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
.+.+.+.+ ..++ ++.++++.++..+ +....+++.+..+|+..++.+|.||
T Consensus 194 -------------------------~~~~~~~~--~~gv~~~~~~~v~~i~~~--~~~~~v~~~~~~~g~~~~~~~D~vv 244 (323)
T 3f8d_A 194 -------------------------IYVETVKK--KPNVEFVLNSVVKEIKGD--KVVKQVVVENLKTGEIKELNVNGVF 244 (323)
T ss_dssp -------------------------HHHHHHHT--CTTEEEECSEEEEEEEES--SSEEEEEEEETTTCCEEEEECSEEE
T ss_pred -------------------------HHHHHHHh--CCCcEEEeCCEEEEEecc--CceeEEEEEECCCCceEEEEcCEEE
Confidence 00011111 2477 8999999998743 4444455444445775568999999
Q ss_pred eecCCcc
Q 035933 166 AADGSRS 172 (405)
Q Consensus 166 ~AdG~~S 172 (405)
.|.|...
T Consensus 245 ~a~G~~p 251 (323)
T 3f8d_A 245 IEIGFDP 251 (323)
T ss_dssp ECCCEEC
T ss_pred EEECCCC
Confidence 9999654
No 256
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.78 E-value=0.00018 Score=65.05 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=32.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 46899999999999999999999999999998754
No 257
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.77 E-value=9.1e-05 Score=72.53 Aligned_cols=96 Identities=15% Similarity=0.300 Sum_probs=68.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||++|+-+|..|++.|.+|+++++.+.+.. . +.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------~--~~------------------------------- 227 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP------P--ID------------------------------- 227 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT------T--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc------c--CC-------------------------------
Confidence 36899999999999999999999999999998765311 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++.+++|.+++ .++..++ +.+|+. +.+|.|
T Consensus 228 ------------------------~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~~~~v~-----~~~g~~--i~~D~V 274 (588)
T 3ics_A 228 ------------------------YEMAAYVHEHMKNHDVELVFEDGVDALE--ENGAVVR-----LKSGSV--IQTDML 274 (588)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEE--GGGTEEE-----ETTSCE--EECSEE
T ss_pred ------------------------HHHHHHHHHHHHHcCCEEEECCeEEEEe--cCCCEEE-----ECCCCE--EEcCEE
Confidence 11122222222 2477 99999999987 3333443 457765 899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|.....
T Consensus 275 i~a~G~~p~~ 284 (588)
T 3ics_A 275 ILAIGVQPES 284 (588)
T ss_dssp EECSCEEECC
T ss_pred EEccCCCCCh
Confidence 9999987643
No 258
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=97.77 E-value=4.8e-05 Score=69.56 Aligned_cols=100 Identities=17% Similarity=0.128 Sum_probs=67.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.+.. .+ ...
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~----------~~--------------~~~------------- 205 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG----------HG--------------KTA------------- 205 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS----------CS--------------HHH-------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC----------CH--------------HHH-------------
Confidence 36899999999999999999999999999998765310 00 000
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
..+.+.+. +.++ ++++++|.++..++ +....|.+. ..+|+...+.+|.||
T Consensus 206 ------------------------~~l~~~~~---~~gv~i~~~~~v~~i~~~~-~~v~~v~~~-~~~g~~~~i~~D~vi 256 (360)
T 3ab1_A 206 ------------------------HEVERARA---NGTIDVYLETEVASIEESN-GVLTRVHLR-SSDGSKWTVEADRLL 256 (360)
T ss_dssp ------------------------HSSHHHHH---HTSEEEESSEEEEEEEEET-TEEEEEEEE-ETTCCEEEEECSEEE
T ss_pred ------------------------HHHHHHhh---cCceEEEcCcCHHHhccCC-CceEEEEEE-ecCCCeEEEeCCEEE
Confidence 01111111 2467 99999999997532 221234432 346755568999999
Q ss_pred eecCCcc
Q 035933 166 AADGSRS 172 (405)
Q Consensus 166 ~AdG~~S 172 (405)
.|.|...
T Consensus 257 ~a~G~~p 263 (360)
T 3ab1_A 257 ILIGFKS 263 (360)
T ss_dssp ECCCBCC
T ss_pred ECCCCCC
Confidence 9999654
No 259
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.76 E-value=1.7e-05 Score=82.01 Aligned_cols=36 Identities=19% Similarity=0.416 Sum_probs=33.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.+||+||||||||+++|..|++.|++|+|||+.+.+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~ 163 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEA 163 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 479999999999999999999999999999998764
No 260
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.72 E-value=0.00018 Score=67.86 Aligned_cols=36 Identities=28% Similarity=0.448 Sum_probs=33.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.+
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~ 183 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERV 183 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 369999999999999999999999999999998753
No 261
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.67 E-value=1.7e-05 Score=76.64 Aligned_cols=36 Identities=31% Similarity=0.449 Sum_probs=33.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
..+|+||||||+||+.+|..|++ |.+|+|+|+.+..
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 35899999999999999999999 9999999998653
No 262
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.66 E-value=2.2e-05 Score=76.24 Aligned_cols=36 Identities=31% Similarity=0.374 Sum_probs=33.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcC-CcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAG-WDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g-~~v~i~E~~~~ 41 (405)
..+|+||||||.||+++|..|++.| .+|+|+|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999987 79999999876
No 263
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.66 E-value=0.00032 Score=62.54 Aligned_cols=97 Identities=14% Similarity=0.094 Sum_probs=68.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.... . .
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------~-------------~----------------- 186 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA----------A-------------P----------------- 186 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS----------C-------------H-----------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC----------C-------------H-----------------
Confidence 46899999999999999999999999999998765310 0 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
..+.+.+. +.|+ +++++++.++..+. +....+++. ..+|+..++.+|.||
T Consensus 187 ------------------------~~~~~~~~---~~gv~~~~~~~v~~i~~~~-~~~~~v~~~-~~~g~~~~~~~D~vv 237 (315)
T 3r9u_A 187 ------------------------STVEKVKK---NEKIELITSASVDEVYGDK-MGVAGVKVK-LKDGSIRDLNVPGIF 237 (315)
T ss_dssp ------------------------HHHHHHHH---CTTEEEECSCEEEEEEEET-TEEEEEEEE-CTTSCEEEECCSCEE
T ss_pred ------------------------HHHHHHHh---cCCeEEEeCcEEEEEEcCC-CcEEEEEEE-cCCCCeEEeecCeEE
Confidence 01111111 3578 88999999997433 122224432 457876669999999
Q ss_pred eecCCcc
Q 035933 166 AADGSRS 172 (405)
Q Consensus 166 ~AdG~~S 172 (405)
.|.|...
T Consensus 238 ~a~G~~p 244 (315)
T 3r9u_A 238 TFVGLNV 244 (315)
T ss_dssp ECSCEEE
T ss_pred EEEcCCC
Confidence 9999653
No 264
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.66 E-value=0.00024 Score=64.97 Aligned_cols=35 Identities=29% Similarity=0.509 Sum_probs=30.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|+|||+|++|+-+|..|++.|.+|+++++.+.
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~ 200 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTG 200 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC---
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCC
Confidence 35899999999999999999999999999999865
No 265
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.64 E-value=2e-05 Score=77.69 Aligned_cols=36 Identities=28% Similarity=0.290 Sum_probs=33.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC--------CcEEEEccCC-CC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAG--------WDVVVIEKTR-GP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g--------~~v~i~E~~~-~~ 42 (405)
.++|+|||||+|||++|+.|++.| ++|+|||+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 368999999999999999999998 9999999987 55
No 266
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.63 E-value=0.00038 Score=65.40 Aligned_cols=36 Identities=17% Similarity=0.289 Sum_probs=33.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+..
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l 182 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKI 182 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCC
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccc
Confidence 358999999999999999999999999999998753
No 267
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.63 E-value=0.00036 Score=67.09 Aligned_cols=97 Identities=14% Similarity=0.078 Sum_probs=68.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||++|+-+|..|++.|.+|+++++.+.... .
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~------------~----------------------------- 393 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------D----------------------------- 393 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS------------C-----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc------------C-----------------------------
Confidence 36899999999999999999999999999998764210 0
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeE-EEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTV-NVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v-~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+ ..++ ++.++++.++.. ++..+ .+.+.+..+|+..++.+|.|
T Consensus 394 ------------------------~~l~~~l~~--~~gV~v~~~~~v~~i~~--~~~~v~~v~~~~~~~g~~~~i~~D~v 445 (521)
T 1hyu_A 394 ------------------------QVLQDKVRS--LKNVDIILNAQTTEVKG--DGSKVVGLEYRDRVSGDIHSVALAGI 445 (521)
T ss_dssp ------------------------HHHHHHHTT--CTTEEEECSEEEEEEEE--CSSSEEEEEEEETTTCCEEEEECSEE
T ss_pred ------------------------HHHHHHHhc--CCCcEEEeCCEEEEEEc--CCCcEEEEEEEeCCCCceEEEEcCEE
Confidence 001111211 1477 889999999874 33333 45554444576667899999
Q ss_pred EeecCCcc
Q 035933 165 VAADGSRS 172 (405)
Q Consensus 165 V~AdG~~S 172 (405)
|.|.|...
T Consensus 446 i~a~G~~p 453 (521)
T 1hyu_A 446 FVQIGLLP 453 (521)
T ss_dssp EECCCEEE
T ss_pred EECcCCCC
Confidence 99999543
No 268
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.61 E-value=4.1e-05 Score=74.71 Aligned_cols=37 Identities=32% Similarity=0.404 Sum_probs=34.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHH-cCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALIL-AGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~-~g~~v~i~E~~~~~ 42 (405)
..+|++|||||++|+++|..|++ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46899999999999999999999 79999999998754
No 269
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.59 E-value=4e-05 Score=73.49 Aligned_cols=36 Identities=19% Similarity=0.176 Sum_probs=33.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+||+|||+|++|+++|..|++.|++|+|+|+...
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 458999999999999999999999999999999874
No 270
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.59 E-value=0.00062 Score=66.76 Aligned_cols=32 Identities=31% Similarity=0.550 Sum_probs=30.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
.+|+|||||+.|+-+|..|++.|.+|+|+++.
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 58999999999999999999999999999987
No 271
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.58 E-value=4.9e-05 Score=72.89 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=33.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|++|||+|++|+.+|..|++.|.+|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 458999999999999999999999999999999864
No 272
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.56 E-value=3.6e-05 Score=74.66 Aligned_cols=35 Identities=34% Similarity=0.502 Sum_probs=32.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILA-GWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~-g~~v~i~E~~~ 40 (405)
..||+||||||.||+.+|..|++. +.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 358999999999999999999975 89999999988
No 273
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.56 E-value=0.0002 Score=64.42 Aligned_cols=96 Identities=14% Similarity=0.074 Sum_probs=67.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.... . ...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~------------~-----------~~~--------------- 195 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA------------H-----------EHS--------------- 195 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS------------C-----------HHH---------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc------------c-----------HHH---------------
Confidence 46899999999999999999999999999998765310 0 000
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLV 165 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV 165 (405)
+ +.|. +.|+ ++.++++.++.. ++....+.+.+..+|+..++.+|.||
T Consensus 196 --------------------------~-~~l~---~~gv~~~~~~~v~~i~~--~~~~~~v~~~~~~~g~~~~~~~D~vv 243 (332)
T 3lzw_A 196 --------------------------V-ENLH---ASKVNVLTPFVPAELIG--EDKIEQLVLEEVKGDRKEILEIDDLI 243 (332)
T ss_dssp --------------------------H-HHHH---HSSCEEETTEEEEEEEC--SSSCCEEEEEETTSCCEEEEECSEEE
T ss_pred --------------------------H-HHHh---cCCeEEEeCceeeEEec--CCceEEEEEEecCCCceEEEECCEEE
Confidence 0 0011 2467 888999999874 33344555544455555668999999
Q ss_pred eecCCcc
Q 035933 166 AADGSRS 172 (405)
Q Consensus 166 ~AdG~~S 172 (405)
.|.|...
T Consensus 244 ~a~G~~p 250 (332)
T 3lzw_A 244 VNYGFVS 250 (332)
T ss_dssp ECCCEEC
T ss_pred EeeccCC
Confidence 9999654
No 274
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.55 E-value=0.00048 Score=65.29 Aligned_cols=99 Identities=13% Similarity=0.203 Sum_probs=68.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||||+.|+-+|..|++.|.+|+++++.+.+.. . +.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~------~--~~------------------------------- 210 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS------R--FD------------------------------- 210 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T--SC-------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc------c--cC-------------------------------
Confidence 46899999999999999999999999999999865310 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++.+++|.+++.+++ ..+.|+. +++|+ +.+|.|
T Consensus 211 ------------------------~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~v~~--~~~g~---i~aD~V 260 (463)
T 4dna_A 211 ------------------------QDMRRGLHAAMEEKGIRILCEDIIQSVSADAD-GRRVATT--MKHGE---IVADQV 260 (463)
T ss_dssp ------------------------HHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SCEEEEE--SSSCE---EEESEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-CEEEEEE--cCCCe---EEeCEE
Confidence 11122333333 2477 999999999985333 2244431 34554 899999
Q ss_pred EeecCCcccc
Q 035933 165 VAADGSRSSV 174 (405)
Q Consensus 165 V~AdG~~S~v 174 (405)
|.|.|..+..
T Consensus 261 v~a~G~~p~~ 270 (463)
T 4dna_A 261 MLALGRMPNT 270 (463)
T ss_dssp EECSCEEESC
T ss_pred EEeeCcccCC
Confidence 9999987654
No 275
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.54 E-value=8.9e-05 Score=72.13 Aligned_cols=39 Identities=15% Similarity=0.100 Sum_probs=36.0
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 4 RMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 4 ~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
|.++|||+|||+|..|..+|..|++.|.+|+++||+++.
T Consensus 5 ~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~ 43 (650)
T 1vg0_A 5 LPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYY 43 (650)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcc
Confidence 434699999999999999999999999999999999875
No 276
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.49 E-value=3.5e-05 Score=74.56 Aligned_cols=36 Identities=25% Similarity=0.243 Sum_probs=33.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHH-cCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALIL-AGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~-~g~~v~i~E~~~~~ 42 (405)
.+|+||||||+||+.+|..|++ .|.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 79999999998754
No 277
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.46 E-value=6.8e-05 Score=72.54 Aligned_cols=37 Identities=30% Similarity=0.361 Sum_probs=33.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILA-GWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~-g~~v~i~E~~~~~ 42 (405)
+.+|++|||||++|+++|..|++. |.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 358999999999999999999998 9999999998654
No 278
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.39 E-value=0.0011 Score=63.82 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=33.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|+|||+|.+|+-+|..|++.|.+|++++|.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46999999999999999999999999999999987
No 279
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.38 E-value=0.00018 Score=57.00 Aligned_cols=41 Identities=24% Similarity=0.302 Sum_probs=33.6
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
|.......+|+|+|+|..|..+|..|.+.|++|+++++++.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 33344567999999999999999999999999999998754
No 280
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.37 E-value=0.00071 Score=63.91 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHH--------------------HcCC-cEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALI--------------------LAGW-DVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~--------------------~~g~-~v~i~E~~~~ 41 (405)
..+|+|||+|..|+-+|..|+ +.|. +|+|++|+..
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 468999999999999999999 5788 7999999865
No 281
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.32 E-value=0.0018 Score=62.43 Aligned_cols=36 Identities=11% Similarity=0.160 Sum_probs=33.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
..+|+|||+|++|+-+|..|++.+.+|++++|.+..
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNW 220 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCc
Confidence 468999999999999999999999999999999863
No 282
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.31 E-value=0.00075 Score=63.60 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCc-EEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWD-VVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~-v~i~E~~~~ 41 (405)
..+|+|||||++|+=+|..|++.|.+ |+++++.+.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 46899999999999999999999999 999998754
No 283
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.28 E-value=0.00075 Score=64.48 Aligned_cols=44 Identities=18% Similarity=0.126 Sum_probs=30.2
Q ss_pred Cce-EEecceEEEEEEecCCCeEEEEEeecCCCce--eEEeeeEEEeecCCc
Q 035933 123 VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVI--IDVVGDLLVAADGSR 171 (405)
Q Consensus 123 ~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~--~~~~~d~vV~AdG~~ 171 (405)
.|+ ++.+++|.+++ ++ .+.+... ..||+. .++.+|+||-|.|..
T Consensus 285 ~GV~v~~~~~v~~v~--~~--~~~~~~~-~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 285 TSIKVHLRTAVAKVE--EK--QLLAKTK-HEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp TTCEEETTEEEEEEC--SS--EEEEEEE-CTTSCEEEEEEECSEEEECCCEE
T ss_pred cceeeecCceEEEEe--CC--ceEEEEE-ecCcccceeeeccCEEEEccCCc
Confidence 478 99999999886 33 3333221 456642 358999999999964
No 284
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.13 E-value=0.0063 Score=54.03 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=32.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|+|||||..|+-+|..|++.|.+|+|+|+...
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 46899999999999999999999999999998755
No 285
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.09 E-value=0.00071 Score=53.39 Aligned_cols=35 Identities=34% Similarity=0.376 Sum_probs=32.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
.+.+|+|+|+|..|..+|..|.+.|++|+++|+.+
T Consensus 2 ~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 2 RKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 45789999999999999999999999999999974
No 286
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.08 E-value=0.0025 Score=63.48 Aligned_cols=98 Identities=11% Similarity=0.102 Sum_probs=66.4
Q ss_pred CcEEEEc--CCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccc
Q 035933 8 PKAIIVG--GSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNR 85 (405)
Q Consensus 8 ~~V~IiG--aG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 85 (405)
.+|+||| +|+.|+-+|..|++.|.+|+++++.+.... . .... .
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~------~-------------------~~~~-~--------- 568 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSS------W-------------------TNNT-F--------- 568 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTG------G-------------------GGGG-T---------
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccccccc------c-------------------cccc-h---------
Confidence 5799999 999999999999999999999998765310 0 0000 0
Q ss_pred eecCccceeeeecccCCcccccccHHHHHHHHHhcCCCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 86 AVDREKNICRVLARDENFNYLQAHWTDLHGLIYNTLPVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
.+..+.+.|.+ .|+ ++.+++|.+++ .+ .+.+.. ..+++..++.+|.|
T Consensus 569 -----------------------~~~~l~~~l~~---~GV~i~~~~~V~~i~--~~--~~~v~~--~~~~~~~~i~aD~V 616 (690)
T 3k30_A 569 -----------------------EVNRIQRRLIE---NGVARVTDHAVVAVG--AG--GVTVRD--TYASIERELECDAV 616 (690)
T ss_dssp -----------------------CHHHHHHHHHH---TTCEEEESEEEEEEE--TT--EEEEEE--TTTCCEEEEECSEE
T ss_pred -----------------------hHHHHHHHHHH---CCCEEEcCcEEEEEE--CC--eEEEEE--ccCCeEEEEECCEE
Confidence 01233333433 478 99999999987 43 344332 22344445899999
Q ss_pred EeecCCcc
Q 035933 165 VAADGSRS 172 (405)
Q Consensus 165 V~AdG~~S 172 (405)
|.|.|...
T Consensus 617 V~A~G~~p 624 (690)
T 3k30_A 617 VMVTARLP 624 (690)
T ss_dssp EEESCEEE
T ss_pred EECCCCCC
Confidence 99999654
No 287
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.04 E-value=0.0022 Score=60.62 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=32.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|+|||||++|+=+|..|++.|.+|+++++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 46899999999999999999999999999998765
No 288
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.01 E-value=0.00081 Score=59.31 Aligned_cols=33 Identities=18% Similarity=0.082 Sum_probs=30.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
..+|+|||+|++|+-+|..|++.| +|+++++.+
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 468999999999999999999999 999998764
No 289
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.00 E-value=0.00085 Score=52.08 Aligned_cols=35 Identities=26% Similarity=0.524 Sum_probs=32.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 35899999999999999999999999999998753
No 290
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.91 E-value=0.0037 Score=58.90 Aligned_cols=35 Identities=20% Similarity=0.489 Sum_probs=30.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--------------------CC-cEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILA--------------------GW-DVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~--------------------g~-~v~i~E~~~~ 41 (405)
..+|+|||+|.+|+-+|..|++. |. +|+|++|+..
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 46899999999999999999974 65 9999999865
No 291
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.82 E-value=0.0014 Score=50.63 Aligned_cols=33 Identities=33% Similarity=0.412 Sum_probs=30.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
++|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 589999999999999999999999999999864
No 292
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.79 E-value=0.0017 Score=50.31 Aligned_cols=35 Identities=29% Similarity=0.356 Sum_probs=32.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+.+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 46899999999999999999999999999999864
No 293
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.73 E-value=0.0086 Score=57.15 Aligned_cols=36 Identities=8% Similarity=0.043 Sum_probs=31.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~~ 42 (405)
.++|+|||+|-+|.-.+..|+++ +.+|+++=|.+..
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~~ 283 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSAM 283 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSSC
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCcc
Confidence 36899999999999999999875 7899999888653
No 294
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.69 E-value=0.0019 Score=56.67 Aligned_cols=36 Identities=14% Similarity=0.239 Sum_probs=32.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+..+|+|||+|.-|...|..|++.|++|+++|+++.
T Consensus 3 ~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 3 GITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 346899999999999999999999999999998754
No 295
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.69 E-value=0.0011 Score=62.48 Aligned_cols=36 Identities=17% Similarity=0.391 Sum_probs=32.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~~ 42 (405)
..+|+|||||..|+-+|..+.+.|. +|+++++++..
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~ 300 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRK 300 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCST
T ss_pred CCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCcc
Confidence 4689999999999999999999998 59999998753
No 296
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=96.69 E-value=0.0015 Score=61.51 Aligned_cols=35 Identities=23% Similarity=0.258 Sum_probs=32.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+.++|.|||.|.+|+++|..|+++|++|++.|++.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34799999999999999999999999999999975
No 297
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=96.64 E-value=0.0019 Score=50.09 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=31.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
..+|+|+|+|..|..+|..|.+.|++|+++++.+
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999864
No 298
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.54 E-value=0.0064 Score=62.89 Aligned_cols=34 Identities=15% Similarity=0.173 Sum_probs=32.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.+|+|||+|+.|+-+|..|++.|.+|+|+|+.+.
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~ 318 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSS 318 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSS
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCc
Confidence 5899999999999999999999999999999865
No 299
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.52 E-value=0.0023 Score=47.62 Aligned_cols=33 Identities=21% Similarity=0.222 Sum_probs=30.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC-CcEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAG-WDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g-~~v~i~E~~~ 40 (405)
.+|+|+|+|..|..++..|.+.| ++|+++++++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 58999999999999999999999 8999999875
No 300
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.47 E-value=0.0025 Score=58.64 Aligned_cols=35 Identities=37% Similarity=0.439 Sum_probs=33.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.+|+|||||+.|+-+|..|++.|.+|+|+|+.+.+
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~ 181 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYP 181 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCcc
Confidence 58999999999999999999999999999998764
No 301
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=96.43 E-value=0.0024 Score=56.86 Aligned_cols=36 Identities=11% Similarity=0.213 Sum_probs=33.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
..+|+|||||+.|+=+|..|++.|.+|+|+|+.+..
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccccc
Confidence 368999999999999999999999999999998764
No 302
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.39 E-value=0.004 Score=55.27 Aligned_cols=36 Identities=22% Similarity=0.437 Sum_probs=32.9
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
|+..+|+|||+|..|..+|..|++.|+ +|+++|+.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 455799999999999999999999999 999999973
No 303
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=96.38 E-value=0.0033 Score=57.25 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=31.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+.++|+|||+|..|...|..|++.|++|+++++.+
T Consensus 3 ~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 3 ESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 304
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.36 E-value=0.0075 Score=60.43 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=31.8
Q ss_pred CCcEEEEc--CCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVG--GSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiG--aG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
..+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 35899999 99999999999999999999999986
No 305
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.34 E-value=0.0041 Score=50.54 Aligned_cols=35 Identities=20% Similarity=0.174 Sum_probs=32.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc-CCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILA-GWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~-g~~v~i~E~~~~ 41 (405)
..+|+|+|+|..|..+|..|.+. |++|+++|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 45899999999999999999999 999999998753
No 306
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.30 E-value=0.0041 Score=55.18 Aligned_cols=41 Identities=20% Similarity=0.119 Sum_probs=32.3
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
|+...++.+|.|||+|--|...|..|++.|++|+++++.+.
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 44444457999999999999999999999999999998753
No 307
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.29 E-value=0.0099 Score=53.67 Aligned_cols=33 Identities=15% Similarity=0.261 Sum_probs=30.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
..+|+|||+|++|+-+|..|++.| +|+++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999998 799999874
No 308
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.28 E-value=0.0047 Score=55.41 Aligned_cols=34 Identities=24% Similarity=0.384 Sum_probs=31.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
.+|+|||||-.|..+|..|++.|+ +|+++|+...
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 589999999999999999999998 9999999754
No 309
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.24 E-value=0.0044 Score=55.20 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=32.1
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
|+.| ...+|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 1 m~~~-~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 1 MASP-AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCC-CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5443 446899999999999999999999999999999764
No 310
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.22 E-value=0.0079 Score=62.64 Aligned_cols=33 Identities=18% Similarity=0.378 Sum_probs=30.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
.+|+|||||..|+=+|..|.+.|. +|+|+++++
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999997 899999986
No 311
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=96.19 E-value=0.005 Score=55.45 Aligned_cols=32 Identities=28% Similarity=0.351 Sum_probs=30.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
++|+|||+|-.|.++|..|++.|++|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 58999999999999999999999999999985
No 312
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=96.17 E-value=0.0053 Score=54.75 Aligned_cols=36 Identities=25% Similarity=0.414 Sum_probs=31.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~~ 41 (405)
+..+|+|||+|-.|..+|..|+..|+ +++++|....
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~~ 43 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFKE 43 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC--
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChH
Confidence 35799999999999999999999998 8999998753
No 313
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.17 E-value=0.0036 Score=55.29 Aligned_cols=35 Identities=17% Similarity=-0.007 Sum_probs=32.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+.+|.|||.|--|...|..|++.|++|+++++.+.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 56899999999999999999999999999999865
No 314
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=96.11 E-value=0.0056 Score=54.73 Aligned_cols=33 Identities=18% Similarity=0.291 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
++|+|||+|.-|.++|..|++.|.+|+++.|.+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 589999999999999999999999999999864
No 315
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=96.09 E-value=0.0066 Score=54.19 Aligned_cols=35 Identities=23% Similarity=0.314 Sum_probs=32.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
..+|+|||+|..|..+|..|++.|+ +|+++|+.+.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 4689999999999999999999998 9999998754
No 316
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=96.08 E-value=0.007 Score=53.62 Aligned_cols=34 Identities=24% Similarity=0.517 Sum_probs=31.6
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.+|.|||+|.-|...|..|++.|++|+++|+.+.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 5799999999999999999999999999998754
No 317
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.05 E-value=0.0054 Score=51.46 Aligned_cols=33 Identities=33% Similarity=0.589 Sum_probs=31.0
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+|+|+|+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 699999999999999999999999999998754
No 318
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.00 E-value=0.0081 Score=50.22 Aligned_cols=34 Identities=21% Similarity=0.395 Sum_probs=31.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
...+|+|||||..|...|..|.+.|.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 5679999999999999999999999999999875
No 319
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.00 E-value=0.0093 Score=52.90 Aligned_cols=37 Identities=19% Similarity=0.264 Sum_probs=33.2
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.+..+|.|||.|.-|...|..|++.|++|+++++.+.
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 3457899999999999999999999999999998754
No 320
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=95.98 E-value=0.027 Score=55.86 Aligned_cols=29 Identities=24% Similarity=0.173 Sum_probs=25.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEE
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVV 35 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i 35 (405)
..+|+|||||+.|+-+|..|++.|.+|++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 46899999999999999999998876653
No 321
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=95.98 E-value=0.0087 Score=53.41 Aligned_cols=35 Identities=26% Similarity=0.452 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
..+|+|||||-.|..+|..|+..|+ +|+++|....
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 3589999999999999999999998 9999998753
No 322
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.97 E-value=0.0072 Score=54.79 Aligned_cols=35 Identities=23% Similarity=0.174 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.++|+|||+|--|.++|..|++.|++|+++++.+.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998643
No 323
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.94 E-value=0.0053 Score=57.52 Aligned_cols=37 Identities=22% Similarity=0.495 Sum_probs=33.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
..++|+|||.|++|+++|..|+++|++|+++|.+...
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 3468999999999999999999999999999987654
No 324
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=95.91 E-value=0.0065 Score=53.84 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=31.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|+|||||.-|...|..++..|++|+++|..+.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999998754
No 325
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=95.86 E-value=0.0082 Score=53.41 Aligned_cols=33 Identities=27% Similarity=0.279 Sum_probs=30.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
++|+|||+|..|...|..|++.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999864
No 326
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.85 E-value=0.01 Score=54.22 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=33.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
...+|+|+|+|++|+.+|..|...|.+|+++|+++.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 346999999999999999999999999999999865
No 327
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.84 E-value=0.007 Score=53.88 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=30.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
++|+|||+|--|.+.|..|++.|.+|+++.|..
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 489999999999999999999999999999863
No 328
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=95.83 E-value=0.011 Score=53.03 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
..+|+|||||..|..+|..|++.|+ +|+++|....
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 3689999999999999999999999 9999999754
No 329
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.76 E-value=0.0065 Score=52.50 Aligned_cols=35 Identities=14% Similarity=0.422 Sum_probs=32.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+...|+|||||.+|...+..|.+.|.+|+|++...
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 45799999999999999999999999999999764
No 330
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=95.75 E-value=0.01 Score=53.77 Aligned_cols=38 Identities=16% Similarity=0.195 Sum_probs=32.6
Q ss_pred CCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 4 RMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 4 ~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
||+.++|.|||.|--|..+|..|++.|++|+++++.+.
T Consensus 19 Mm~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 19 YFQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred hhcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 44567999999999999999999999999999998753
No 331
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=95.73 E-value=0.011 Score=55.97 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=32.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
...+|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 4 ~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 4 NVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 446899999999999999999999999999998754
No 332
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=95.69 E-value=0.013 Score=52.17 Aligned_cols=37 Identities=27% Similarity=0.406 Sum_probs=32.8
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
|+..+|+|||||..|.++|..|+..|+ +|+++|....
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 345699999999999999999999999 9999998764
No 333
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.69 E-value=0.013 Score=48.69 Aligned_cols=35 Identities=17% Similarity=0.202 Sum_probs=31.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|.|||+|-.|.++|..|++.|++|+++++.+.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998764
No 334
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=95.69 E-value=0.014 Score=51.99 Aligned_cols=37 Identities=27% Similarity=0.429 Sum_probs=33.1
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
|+..+|+|||+|..|.++|..|+..|+ +++++|....
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 445799999999999999999999988 9999998764
No 335
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=95.66 E-value=0.0086 Score=52.80 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=31.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
++|+|||+|--|.+.|..|++.|.+|++++|..
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 489999999999999999999999999999874
No 336
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.66 E-value=0.035 Score=51.92 Aligned_cols=44 Identities=5% Similarity=-0.107 Sum_probs=29.4
Q ss_pred Cce-EEecceEEEEEEecCCCeEEEEEeecCCCc---eeEEeeeEEEeecCCc
Q 035933 123 VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDV---IIDVVGDLLVAADGSR 171 (405)
Q Consensus 123 ~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~---~~~~~~d~vV~AdG~~ 171 (405)
.|+ ++.+++|.+++ .+ .++++.. ..+|+ ..++.+|+||.|.|..
T Consensus 221 ~gI~~~~~~~v~~v~--~~--~v~~~~~-~~~g~~~~~~~i~~D~vv~~~g~~ 268 (437)
T 3sx6_A 221 EGIEAYTNCKVTKVE--DN--KMYVTQV-DEKGETIKEMVLPVKFGMMIPAFK 268 (437)
T ss_dssp TTCEEECSEEEEEEE--TT--EEEEEEE-CTTSCEEEEEEEECSEEEEECCEE
T ss_pred CCCEEEcCCEEEEEE--CC--eEEEEec-ccCCccccceEEEEeEEEEcCCCc
Confidence 477 88999999886 33 3444321 23443 3458999999998854
No 337
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.61 E-value=0.011 Score=53.50 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=32.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
...+|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 347999999999999999999999999999999864
No 338
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.59 E-value=0.014 Score=51.25 Aligned_cols=33 Identities=21% Similarity=0.169 Sum_probs=31.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+|.|||+|..|.+.|..|++.|++|++++|.+.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998764
No 339
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=95.57 E-value=0.016 Score=50.86 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=30.8
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 8 PKAIIVGG-SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
.+|.|||+ |-.|..+|..|.+.|++|+++++.+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 48999999 9999999999999999999999864
No 340
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=95.57 E-value=0.013 Score=52.28 Aligned_cols=34 Identities=21% Similarity=0.323 Sum_probs=31.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
.++|+|||+|-.|.++|..|++.|+ +|+++++..
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3589999999999999999999999 999999874
No 341
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.55 E-value=0.0067 Score=50.96 Aligned_cols=35 Identities=14% Similarity=0.194 Sum_probs=31.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEE-EccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVV-IEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i-~E~~~~ 41 (405)
.++|.|||+|-.|.++|..|++.|++|++ ++|++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 35899999999999999999999999998 887654
No 342
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.50 E-value=0.013 Score=54.35 Aligned_cols=35 Identities=20% Similarity=0.261 Sum_probs=31.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..++|+|||+|-.|+.+|..|++ |++|+++|+.+.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 34689999999999999999998 999999998754
No 343
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.46 E-value=0.014 Score=54.63 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=31.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++|.|||+|-.|+.+|..|++.|++|+++++.+.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 4899999999999999999999999999998753
No 344
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=95.45 E-value=0.015 Score=51.78 Aligned_cols=35 Identities=23% Similarity=0.423 Sum_probs=31.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
+..+|+|||||-.|.++|..|+.+|+ ++.++|...
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 45799999999999999999999885 899999753
No 345
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.45 E-value=0.013 Score=55.12 Aligned_cols=36 Identities=19% Similarity=0.199 Sum_probs=33.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHc-CC-cEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILA-GW-DVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~-g~-~v~i~E~~~~ 41 (405)
..++|+|||+|-.|+.+|..|++. |+ +|+++|+.+.
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 346899999999999999999999 99 9999999876
No 346
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=95.41 E-value=0.016 Score=51.57 Aligned_cols=35 Identities=34% Similarity=0.497 Sum_probs=31.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
...+|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 35699999999999999999999998 899999853
No 347
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.35 E-value=0.019 Score=51.14 Aligned_cols=35 Identities=23% Similarity=0.276 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 348
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=95.34 E-value=0.0067 Score=57.08 Aligned_cols=35 Identities=26% Similarity=0.373 Sum_probs=32.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.++|+|+|+|-.|..+|..|.+.|++|+|+|+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35899999999999999999999999999999864
No 349
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=95.33 E-value=0.02 Score=51.43 Aligned_cols=41 Identities=22% Similarity=0.214 Sum_probs=32.8
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
|+......+|.|||.|.-|.++|..|.+.|++|+++++++.
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~~ 42 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSRS 42 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 44333346899999999999999999999999999998753
No 350
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=95.28 E-value=0.025 Score=52.58 Aligned_cols=40 Identities=20% Similarity=0.191 Sum_probs=34.2
Q ss_pred CCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 2 RERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 2 ~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+..++..+|+|+|+|..|..++..+++.|++|.+++..+.
T Consensus 30 ~~~~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 30 SPILPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred ccCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 3345567999999999999999999999999999986543
No 351
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=95.26 E-value=0.019 Score=51.36 Aligned_cols=37 Identities=14% Similarity=0.201 Sum_probs=31.7
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcC----CcEEEEccCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAG----WDVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g----~~v~i~E~~~~ 41 (405)
|+.++|.|||+|--|.+.|..|.+.| ++|++++|.+.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~~ 60 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDMD 60 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCTT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCcc
Confidence 44468999999999999999999999 79999998753
No 352
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.23 E-value=0.021 Score=48.75 Aligned_cols=36 Identities=22% Similarity=0.256 Sum_probs=32.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..++|.|||+|--|.++|..|++.|++|++++|.+.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 457999999999999999999999999999998754
No 353
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=95.22 E-value=0.054 Score=49.76 Aligned_cols=36 Identities=25% Similarity=0.334 Sum_probs=32.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..++|+|+|+|..|..++..+++.|++|.+++..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 456899999999999999999999999999997654
No 354
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.22 E-value=0.021 Score=51.04 Aligned_cols=34 Identities=18% Similarity=0.042 Sum_probs=31.2
Q ss_pred CcEEEEcCCHHHHH-HHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGIS-CAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~-~A~~L~~~g~~v~i~E~~~~ 41 (405)
++|.|||.|.+|++ +|..|.++|++|++.|++..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 58999999999996 89999999999999999864
No 355
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.21 E-value=0.019 Score=50.89 Aligned_cols=32 Identities=34% Similarity=0.482 Sum_probs=30.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
++|+|||+|--|.+.|..|+ .|.+|+++.|.+
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 58999999999999999999 999999999874
No 356
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.16 E-value=0.025 Score=49.41 Aligned_cols=34 Identities=24% Similarity=0.381 Sum_probs=31.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++|+|.|+|..|..++..|.++|++|+++.|+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 5899999999999999999999999999998765
No 357
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.13 E-value=0.024 Score=50.33 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=32.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++|.|||.|.-|...|..|++.|++|+++++.+.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5899999999999999999999999999998764
No 358
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.10 E-value=0.021 Score=53.88 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
.++|+|||+|-.|+.+|..|++.|++|+++++.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4699999999999999999999999999999864
No 359
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=95.07 E-value=0.011 Score=54.05 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=30.3
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+|.|||+|--|.+.|..|++.|++|+++++.+
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999864
No 360
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=95.07 E-value=0.024 Score=48.94 Aligned_cols=34 Identities=15% Similarity=0.070 Sum_probs=31.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC----CcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAG----WDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g----~~v~i~E~~~~ 41 (405)
++|.|||+|--|.+.|..|.+.| .+|+++++.+.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 69999998765
No 361
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=95.07 E-value=0.028 Score=49.90 Aligned_cols=35 Identities=26% Similarity=0.309 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~~ 41 (405)
..+|.|||+|.-|.+.|..|++.|+ +|+++++.+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 3689999999999999999999999 9999998753
No 362
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=95.06 E-value=0.024 Score=52.40 Aligned_cols=37 Identities=16% Similarity=0.161 Sum_probs=32.9
Q ss_pred CCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 3 ERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 3 ~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
-||+..+|+|+|+|..|..++..+++.|++|.+++ .+
T Consensus 20 ~mm~~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~ 56 (403)
T 3k5i_A 20 HMWNSRKVGVLGGGQLGRMLVESANRLNIQVNVLD-AD 56 (403)
T ss_dssp -CCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-ST
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CC
Confidence 35667899999999999999999999999999999 54
No 363
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.05 E-value=0.063 Score=50.01 Aligned_cols=43 Identities=9% Similarity=-0.094 Sum_probs=29.6
Q ss_pred Cce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcc
Q 035933 123 VEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRS 172 (405)
Q Consensus 123 ~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S 172 (405)
.|+ ++++++|.+|+ .+ .++++ ..+++..++.+|+||.|.|...
T Consensus 213 ~GV~i~~~~~v~~v~--~~--~v~~~---~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 213 RNIDWIANVAVKAIE--PD--KVIYE---DLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp TTCEEECSCEEEEEC--SS--EEEEE---CTTSCEEEEECSEEEEECEEEC
T ss_pred CCCEEEeCCEEEEEe--CC--eEEEE---ecCCCceEEeeeEEEECCCCcc
Confidence 477 99999999886 32 34443 1123334589999999999754
No 364
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.04 E-value=0.024 Score=50.17 Aligned_cols=32 Identities=31% Similarity=0.553 Sum_probs=30.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
+|+|||||-.|..+|..|+..|+ +|+++|+..
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 79999999999999999999999 999999874
No 365
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.04 E-value=0.0084 Score=46.54 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=31.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
..+|+|||+|..|..+|..|.+.|++|+++++..
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 366
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.04 E-value=0.015 Score=51.80 Aligned_cols=34 Identities=15% Similarity=-0.040 Sum_probs=31.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC-CcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAG-WDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g-~~v~i~E~~~~ 41 (405)
++|.|||+|--|..+|..|++.| ++|+++++.+.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 58999999999999999999999 99999999863
No 367
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=95.01 E-value=0.028 Score=51.57 Aligned_cols=36 Identities=14% Similarity=0.232 Sum_probs=32.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
...+|+|+|+|++|+.++..+...|.+|+++|+++.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 356999999999999999999999999999998754
No 368
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=95.00 E-value=0.024 Score=52.18 Aligned_cols=35 Identities=20% Similarity=0.302 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|+|+|+|.+|+.+|..+...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998754
No 369
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=94.94 E-value=0.03 Score=49.66 Aligned_cols=34 Identities=26% Similarity=0.436 Sum_probs=30.9
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
.+|+|||||-.|..+|..|+..|+ +|+++|....
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~ 37 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEG 37 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCcc
Confidence 489999999999999999999997 9999998753
No 370
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=94.94 E-value=0.029 Score=49.81 Aligned_cols=41 Identities=32% Similarity=0.498 Sum_probs=32.6
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
|+..++.++|+|.|| |..|..++..|.++|++|+++.|...
T Consensus 1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 443233579999999 99999999999999999999998765
No 371
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=94.93 E-value=0.023 Score=50.20 Aligned_cols=34 Identities=21% Similarity=0.170 Sum_probs=31.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
..+|.|||+|-.|...|..|.+.|++|+++++.+
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3589999999999999999999999999999864
No 372
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=94.92 E-value=0.022 Score=53.85 Aligned_cols=37 Identities=24% Similarity=0.394 Sum_probs=32.8
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
|.+++|.|||+|.-|..+|..|++.|++|++++|.+.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~~ 49 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSRE 49 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 5678999999999999999999999999999998753
No 373
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=94.92 E-value=0.026 Score=50.30 Aligned_cols=33 Identities=27% Similarity=0.364 Sum_probs=29.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
..+|+|||+|--|.+.|..|++.|.+|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 653
No 374
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=94.90 E-value=0.033 Score=48.61 Aligned_cols=35 Identities=17% Similarity=0.351 Sum_probs=31.9
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC---cEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW---DVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~---~v~i~E~~~~ 41 (405)
+++|.|||+|--|.+.|..|.+.|+ +|+++++++.
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~~ 40 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSLD 40 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSSH
T ss_pred CCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCHH
Confidence 4689999999999999999999999 9999998754
No 375
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=94.89 E-value=0.0096 Score=50.51 Aligned_cols=35 Identities=20% Similarity=0.270 Sum_probs=30.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.+.+|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 35689999999999999999999999 999998754
No 376
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.87 E-value=0.028 Score=50.81 Aligned_cols=36 Identities=31% Similarity=0.528 Sum_probs=32.9
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
....+|+|+|||.||..+|..|...|. +|+++|++.
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 356799999999999999999999999 999999974
No 377
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.85 E-value=0.022 Score=54.91 Aligned_cols=35 Identities=11% Similarity=0.238 Sum_probs=33.2
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|+|||+|.+|+-+|..|++.+.+|++++|.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999986
No 378
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.85 E-value=0.037 Score=51.65 Aligned_cols=35 Identities=23% Similarity=0.371 Sum_probs=32.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
-.+|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 36899999999999999999999999999999864
No 379
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.84 E-value=0.024 Score=52.43 Aligned_cols=35 Identities=23% Similarity=0.315 Sum_probs=32.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+.+|+|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 35799999999999999999999999999998864
No 380
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.82 E-value=0.028 Score=52.89 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=32.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|.|||+|.-|...|..|++.|++|+++|+.+.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 35899999999999999999999999999998754
No 381
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.82 E-value=0.023 Score=49.14 Aligned_cols=34 Identities=26% Similarity=0.393 Sum_probs=30.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCc-EEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWD-VVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~-v~i~E~~~ 40 (405)
.++|.|||+|-.|...|..|++.|++ |.++++.+
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 35899999999999999999999999 88998864
No 382
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.80 E-value=0.028 Score=48.13 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
..+|+|||+|-.|..+|..|++.|. +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 4689999999999999999999998 899999875
No 383
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.77 E-value=0.029 Score=50.92 Aligned_cols=34 Identities=26% Similarity=0.430 Sum_probs=31.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
..+|+|+|+|.+|..++..|+..|.+|+++++++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999874
No 384
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.76 E-value=0.029 Score=49.17 Aligned_cols=34 Identities=29% Similarity=0.375 Sum_probs=31.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++|.|||+|-.|...|..|++.|++|+++++.+.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998764
No 385
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=94.76 E-value=0.035 Score=49.38 Aligned_cols=39 Identities=23% Similarity=0.514 Sum_probs=32.7
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
|..+ +..+|+|||+|..|.++|..|+..|+ +|+++|...
T Consensus 1 m~~~-~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 1 MKNN-GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CTTT-TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCC-CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 5543 34699999999999999999998886 899999864
No 386
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.74 E-value=0.032 Score=50.08 Aligned_cols=34 Identities=18% Similarity=0.296 Sum_probs=31.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
..+|.|||+|.-|.+.|..|++.|++|++++|.+
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4799999999999999999999999999999864
No 387
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=94.74 E-value=0.027 Score=49.99 Aligned_cols=34 Identities=24% Similarity=0.158 Sum_probs=31.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
..+|.|||.|--|...|..|++.|+ +|+++++.+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~~ 58 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAAS 58 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSSC
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCCC
Confidence 4689999999999999999999999 999999963
No 388
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=94.72 E-value=0.045 Score=50.08 Aligned_cols=37 Identities=24% Similarity=0.331 Sum_probs=33.2
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+..++|+|+|+|..|..++..+++.|++|.+++..+.
T Consensus 10 ~~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 10 KFGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 3457899999999999999999999999999987654
No 389
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.70 E-value=0.033 Score=50.29 Aligned_cols=35 Identities=26% Similarity=0.417 Sum_probs=32.4
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKT 39 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~ 39 (405)
....+|+|+|||-||..+|..|...|. +|+++|++
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 356899999999999999999999998 89999997
No 390
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=94.68 E-value=0.021 Score=50.76 Aligned_cols=31 Identities=26% Similarity=0.230 Sum_probs=29.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc-----C-CcEEEEcc
Q 035933 8 PKAIIVGGSIAGISCAKALILA-----G-WDVVVIEK 38 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~-----g-~~v~i~E~ 38 (405)
++|.|||+|.-|.+.|..|++. | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4899999999999999999999 9 99999987
No 391
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.64 E-value=0.039 Score=46.03 Aligned_cols=33 Identities=33% Similarity=0.374 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
.+|+|||+|-.|...|..|.+.|++|++++|+.
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999864
No 392
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=94.61 E-value=0.038 Score=49.00 Aligned_cols=33 Identities=21% Similarity=0.380 Sum_probs=30.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCC
Q 035933 9 KAIIVGGSIAGISCAKALILA--GWDVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~ 41 (405)
+|+|||+|-.|..+|..|++. |.+|+++|+...
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 799999999999999999985 789999999754
No 393
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=94.58 E-value=0.052 Score=46.08 Aligned_cols=40 Identities=23% Similarity=0.321 Sum_probs=33.7
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|++.++.+.|+|.|| |-.|..+|..|+++|++|+++.|+.
T Consensus 1 M~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 3d3w_A 1 MELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp CCCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 554455678999998 7999999999999999999998763
No 394
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=94.56 E-value=0.012 Score=49.44 Aligned_cols=33 Identities=18% Similarity=0.182 Sum_probs=30.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEcc
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEK 38 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~ 38 (405)
..++|.|||+|..|.++|..|++.|++|+++++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecC
Confidence 346899999999999999999999999999987
No 395
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=94.56 E-value=0.039 Score=49.02 Aligned_cols=35 Identities=26% Similarity=0.389 Sum_probs=31.5
Q ss_pred CCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+.+|+|.|| |-.|..++..|.+.|++|+++.|++.
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 358999997 99999999999999999999998764
No 396
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.54 E-value=0.03 Score=52.83 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=31.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~ 41 (405)
++|.|||+|-.|+.+|..|++. |++|+++++.+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~ 41 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNES 41 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 4899999999999999999999 899999998753
No 397
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=94.53 E-value=0.02 Score=51.91 Aligned_cols=35 Identities=23% Similarity=0.059 Sum_probs=32.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcC-------CcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAG-------WDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g-------~~v~i~E~~~~ 41 (405)
.++|+|||+|--|.+.|..|++.| ++|+++++.+.
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 458999999999999999999999 89999998765
No 398
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.47 E-value=0.037 Score=49.34 Aligned_cols=35 Identities=26% Similarity=0.388 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.++|.|||.|..|...|..|++.|++|+++++.+.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 35899999999999999999999999999998754
No 399
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=94.47 E-value=0.038 Score=48.35 Aligned_cols=34 Identities=21% Similarity=0.363 Sum_probs=31.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.++|.|||+|.-|...|..|+ .|++|+++|+.+.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 479999999999999999999 9999999998754
No 400
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=94.46 E-value=0.048 Score=44.75 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=31.5
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 58999999 99999999999999999999998754
No 401
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.44 E-value=0.04 Score=51.42 Aligned_cols=35 Identities=17% Similarity=0.344 Sum_probs=32.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|.|||.|-.|+.+|..|++.|++|+++++++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999999875
No 402
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.37 E-value=0.033 Score=52.02 Aligned_cols=32 Identities=25% Similarity=0.437 Sum_probs=30.4
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+|+|||+|-.|+.+|..|++.|++|+++++.+
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 79999999999999999999999999999864
No 403
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.36 E-value=0.038 Score=52.29 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=31.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~~ 41 (405)
.++|+|||+|-.|+.+|..|++. |++|+++++++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~ 45 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTA 45 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHH
Confidence 35899999999999999999998 799999998643
No 404
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=94.34 E-value=0.046 Score=49.77 Aligned_cols=35 Identities=23% Similarity=0.433 Sum_probs=31.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
...+|+|+|+|..|..+|..|+..|.+|+++++++
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34789999999999999999999999999999864
No 405
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=94.33 E-value=0.046 Score=51.49 Aligned_cols=35 Identities=14% Similarity=0.237 Sum_probs=32.4
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+.+|.|||.|--|..+|..|+++|++|+++++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 35899999999999999999999999999999864
No 406
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.30 E-value=0.032 Score=48.87 Aligned_cols=33 Identities=30% Similarity=0.368 Sum_probs=31.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+|.|||.|--|...|..|++.|++|+++++.+.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 799999999999999999999999999998764
No 407
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=94.29 E-value=0.055 Score=46.90 Aligned_cols=35 Identities=14% Similarity=0.187 Sum_probs=31.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
....|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 34689999999999999999999999999998764
No 408
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=94.28 E-value=0.061 Score=46.43 Aligned_cols=40 Identities=25% Similarity=0.347 Sum_probs=33.4
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|..|++.+.|+|.|| |-.|..+|..|+++|++|+++.|+.
T Consensus 1 M~~m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (267)
T 2gdz_A 1 MAHMVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNL 41 (267)
T ss_dssp -CCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCcccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCH
Confidence 666666678999987 6789999999999999999998764
No 409
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.25 E-value=0.051 Score=49.36 Aligned_cols=35 Identities=29% Similarity=0.437 Sum_probs=32.0
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
++|+|+|||..|..+|+.+++.|++|+++|.++..
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQA 36 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 58999999999999999999999999999987653
No 410
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=94.25 E-value=0.039 Score=49.47 Aligned_cols=30 Identities=20% Similarity=0.253 Sum_probs=29.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEcc
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEK 38 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~ 38 (405)
+|.|||+|..|.+.|..|++.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 411
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=94.21 E-value=0.064 Score=45.50 Aligned_cols=40 Identities=28% Similarity=0.384 Sum_probs=33.1
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|+..++.+.|+|.|| |-.|..+|..|+++|++|+++.|+.
T Consensus 1 m~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 1cyd_A 1 MKLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTN 41 (244)
T ss_dssp --CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 554456678999998 7899999999999999999998864
No 412
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=94.18 E-value=0.045 Score=47.95 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=30.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGW--DVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~~ 41 (405)
+|+|||+|..|.++|..|++.|+ +|+++|+.+.
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~~ 36 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAED 36 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECChH
Confidence 79999999999999999999998 8999998753
No 413
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=94.18 E-value=0.064 Score=48.08 Aligned_cols=36 Identities=17% Similarity=0.311 Sum_probs=31.7
Q ss_pred CCCCcEEEEcC-CHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 5 MRKPKAIIVGG-SIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 5 ~~~~~V~IiGa-G~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
|+..+|+|||+ |-.|.++|..|..+|+ +++++|...
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 55679999998 9999999999999986 899999753
No 414
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=94.16 E-value=0.052 Score=49.60 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=31.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
...+|+|+|+|..|..+|..++..|.+|+++++.+
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 34689999999999999999999999999999864
No 415
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=94.13 E-value=0.045 Score=48.28 Aligned_cols=34 Identities=21% Similarity=0.304 Sum_probs=31.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++|.|||+|..|...|..|++.|++|+++++.+.
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 4899999999999999999999999999998753
No 416
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=94.12 E-value=0.063 Score=46.26 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=32.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|+|+|+|-+|-++|..|++.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998754
No 417
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=94.10 E-value=0.047 Score=48.63 Aligned_cols=32 Identities=38% Similarity=0.524 Sum_probs=30.1
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
+|+|||+|-.|.++|..|++.|+ +|+++|+.+
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 79999999999999999999999 999999874
No 418
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=94.08 E-value=0.053 Score=51.19 Aligned_cols=34 Identities=21% Similarity=0.312 Sum_probs=31.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+.+|.|||+|.-|..+|..|++.|++|++++|.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999864
No 419
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=94.05 E-value=0.045 Score=48.17 Aligned_cols=33 Identities=30% Similarity=0.450 Sum_probs=30.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
++|.|||+|..|...|..|.+.|++|.++++.+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 489999999999999999999999999999864
No 420
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=94.03 E-value=0.055 Score=46.83 Aligned_cols=40 Identities=18% Similarity=0.174 Sum_probs=32.8
Q ss_pred CCCCCCCCcEEEEcC---CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 1 MRERMRKPKAIIVGG---SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGa---G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|+..++.+.|+|.|| |-.|..+|..|+++|++|+++.|+.
T Consensus 1 Mm~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~ 43 (269)
T 2h7i_A 1 MTGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDR 43 (269)
T ss_dssp -CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSC
T ss_pred CccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCh
Confidence 444455678999995 7889999999999999999998864
No 421
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.03 E-value=0.05 Score=51.07 Aligned_cols=35 Identities=31% Similarity=0.314 Sum_probs=32.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+..+|+|||||.+|...+..|.+.|.+|+|+++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 45799999999999999999999999999999753
No 422
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=94.01 E-value=0.059 Score=47.90 Aligned_cols=35 Identities=29% Similarity=0.510 Sum_probs=31.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
...+|+|||+|..|.++|..|+..|+ +++++|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 34699999999999999999999988 899999853
No 423
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=93.98 E-value=0.046 Score=45.80 Aligned_cols=34 Identities=15% Similarity=0.390 Sum_probs=31.4
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++|+|.|| |..|..++..|.++|++|+++.|++.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcc
Confidence 58999996 99999999999999999999999865
No 424
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.94 E-value=0.057 Score=44.76 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=30.0
Q ss_pred cEEEEc-CCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 9 KAIIVG-GSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiG-aG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+|+||| +|-.|...|..|.+.|++|++++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999864
No 425
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=93.93 E-value=0.057 Score=47.95 Aligned_cols=35 Identities=26% Similarity=0.466 Sum_probs=31.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
++.+|+|||||-.|.++|..|+..++ ++.++|...
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 40 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVK 40 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 34799999999999999999999887 899999853
No 426
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.92 E-value=0.064 Score=47.23 Aligned_cols=33 Identities=24% Similarity=0.386 Sum_probs=30.7
Q ss_pred CcEEEEc-CCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 8 PKAIIVG-GSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiG-aG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
.+|.||| +|--|.++|..|++.|++|+++++.+
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999998764
No 427
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=93.90 E-value=0.06 Score=47.62 Aligned_cols=33 Identities=21% Similarity=0.429 Sum_probs=30.5
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGW--DVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~~ 41 (405)
+|+|||+|..|.++|..|++.|+ +++++|....
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~ 36 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDG 36 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTT
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchH
Confidence 79999999999999999999988 8999999764
No 428
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=93.87 E-value=0.059 Score=49.95 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=31.7
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.+|+|||.|-.||.+|..|+++|++|+.+|.++.
T Consensus 22 ~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~~ 55 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNPS 55 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHH
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 6899999999999999999999999999998753
No 429
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=93.86 E-value=0.075 Score=45.32 Aligned_cols=34 Identities=9% Similarity=0.176 Sum_probs=31.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC----cEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGW----DVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~----~v~i~E~~~~ 41 (405)
++|.|||+|--|.+.|..|.+.|+ +|.++++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~ 40 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNTA 40 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCHH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCHH
Confidence 479999999999999999999998 9999998743
No 430
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=93.83 E-value=0.069 Score=50.61 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=32.5
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|.|||+|.-|..+|..|+++|++|++++|.+.
T Consensus 10 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~~ 44 (497)
T 2p4q_A 10 SADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQS 44 (497)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSH
T ss_pred CCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 47999999999999999999999999999998764
No 431
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=93.83 E-value=0.17 Score=46.59 Aligned_cols=38 Identities=5% Similarity=-0.011 Sum_probs=29.2
Q ss_pred ce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEEEeecCCcc
Q 035933 124 EI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLLVAADGSRS 172 (405)
Q Consensus 124 ~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~vV~AdG~~S 172 (405)
|+ ++.+++|.+++ .+ .++ +++|+. +++|+||.|.|...
T Consensus 232 gV~~~~~~~v~~i~--~~--~v~-----~~~g~~--~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 232 GIKLVHNFKIKEIR--EH--EIV-----DEKGNT--IPADITILLPPYTG 270 (409)
T ss_dssp TCEEECSCCEEEEC--SS--EEE-----ETTSCE--EECSEEEEECCEEC
T ss_pred CCEEEcCCceEEEC--CC--eEE-----ECCCCE--EeeeEEEECCCCCc
Confidence 67 88899999886 32 233 557775 89999999999754
No 432
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.81 E-value=0.077 Score=49.58 Aligned_cols=36 Identities=33% Similarity=0.396 Sum_probs=32.5
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+....|+|+|+|..|..+|..|+..|.+|+++|+.+
T Consensus 263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 345789999999999999999999999999998864
No 433
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.81 E-value=0.046 Score=48.14 Aligned_cols=35 Identities=29% Similarity=0.406 Sum_probs=28.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.+|.+||-|.-|...|..|.+.|++|++++|.+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASK 40 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 48999999999999999999999999999988753
No 434
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.78 E-value=0.07 Score=46.92 Aligned_cols=35 Identities=9% Similarity=0.120 Sum_probs=31.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
...+|+|+|+|.+|.++|..|.+.|. +|+|+.|..
T Consensus 140 ~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 140 DGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 34689999999999999999999998 999998864
No 435
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=93.76 E-value=0.068 Score=46.49 Aligned_cols=32 Identities=25% Similarity=0.287 Sum_probs=29.9
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+|.|||+|..|.+.|..|.+.|++|+++++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999998764
No 436
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.75 E-value=0.088 Score=45.36 Aligned_cols=40 Identities=15% Similarity=0.166 Sum_probs=33.0
Q ss_pred CCCCCCCCcEEEEcC-CH--HHHHHHHHHHHcCCcEEEEccCC
Q 035933 1 MRERMRKPKAIIVGG-SI--AGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~--aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|+..++.+.|+|.|| |. .|..+|..|+++|++|+++.|..
T Consensus 1 M~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~ 43 (266)
T 3oig_A 1 MNFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGE 43 (266)
T ss_dssp CCSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCch
Confidence 554456678999998 45 89999999999999999998764
No 437
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=93.72 E-value=0.064 Score=46.24 Aligned_cols=36 Identities=11% Similarity=0.161 Sum_probs=31.0
Q ss_pred CCCCcEEEEcC---CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 5 MRKPKAIIVGG---SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 5 ~~~~~V~IiGa---G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
++.+.|+|.|| |-.|..+|..|+++|++|+++.|+.
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND 45 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH
Confidence 34467999998 5899999999999999999998875
No 438
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=93.69 E-value=0.071 Score=47.39 Aligned_cols=34 Identities=18% Similarity=0.358 Sum_probs=31.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
..+|+|||+|..|..+|..|+..|+ +++++|...
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4699999999999999999999998 899999854
No 439
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.69 E-value=0.054 Score=47.17 Aligned_cols=34 Identities=15% Similarity=0.313 Sum_probs=31.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++|+|.|||..|..++..|.++|++|+++.|++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 5899999999999999999999999999998753
No 440
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=93.66 E-value=0.07 Score=50.59 Aligned_cols=99 Identities=17% Similarity=0.250 Sum_probs=71.3
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCCCCCCCCCcceeeCccHHHHHHHhccChhhhhcccCCccccccce
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGPPTGNPTGAGIALHLLSQKIVKSWLHQPDLLHNITLPLTIDQNRA 86 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 86 (405)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+.+.. . +.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~------~--~~------------------------------- 231 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR------N--FD------------------------------- 231 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST------T--SC-------------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc------c--cC-------------------------------
Confidence 36899999999999999999999999999999865310 0 00
Q ss_pred ecCccceeeeecccCCcccccccHHHHHHHHHhcC-CCce-EEecceEEEEEEecCCCeEEEEEeecCCCceeEEeeeEE
Q 035933 87 VDREKNICRVLARDENFNYLQAHWTDLHGLIYNTL-PVEI-VFWGHLYLTFCISHDKSTVNVKAKNLRTDVIIDVVGDLL 164 (405)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~-i~~~~~v~~i~~~~~~~~v~v~~~~~~~g~~~~~~~d~v 164 (405)
..+.+.|.+.+ +.|+ ++.+++|.+++.+ +..+.++ +++|+. +.+|.|
T Consensus 232 ------------------------~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~--~~~v~v~---~~~g~~--i~aD~V 280 (484)
T 3o0h_A 232 ------------------------YDLRQLLNDAMVAKGISIIYEATVSQVQST--ENCYNVV---LTNGQT--ICADRV 280 (484)
T ss_dssp ------------------------HHHHHHHHHHHHHHTCEEESSCCEEEEEEC--SSSEEEE---ETTSCE--EEESEE
T ss_pred ------------------------HHHHHHHHHHHHHCCCEEEeCCEEEEEEee--CCEEEEE---ECCCcE--EEcCEE
Confidence 11112222322 2477 9999999999843 3346666 567764 899999
Q ss_pred EeecCCccccc
Q 035933 165 VAADGSRSSVR 175 (405)
Q Consensus 165 V~AdG~~S~vr 175 (405)
|.|+|..+...
T Consensus 281 i~A~G~~p~~~ 291 (484)
T 3o0h_A 281 MLATGRVPNTT 291 (484)
T ss_dssp EECCCEEECCT
T ss_pred EEeeCCCcCCC
Confidence 99999876653
No 441
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.64 E-value=0.075 Score=44.81 Aligned_cols=37 Identities=14% Similarity=0.208 Sum_probs=32.3
Q ss_pred CCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 5 MRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++.++|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 34578999998 99999999999999999999998754
No 442
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=93.60 E-value=0.055 Score=49.43 Aligned_cols=34 Identities=15% Similarity=0.002 Sum_probs=31.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC-------CcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAG-------WDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g-------~~v~i~E~~~~ 41 (405)
.+|.|||+|--|.+.|..|++.| .+|+++++.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 37999999999999999999999 99999998765
No 443
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.59 E-value=0.071 Score=46.95 Aligned_cols=34 Identities=32% Similarity=0.628 Sum_probs=30.3
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGW--DVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~~ 41 (405)
.+|+|||||..|..+|..|+.+|+ +++++|....
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 689999999999999999999998 9999998764
No 444
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=93.55 E-value=0.088 Score=46.22 Aligned_cols=35 Identities=20% Similarity=0.253 Sum_probs=32.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
...+|.|||+|..|..+|..|+..|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 45789999999999999999999999999999874
No 445
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=93.55 E-value=0.078 Score=48.65 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=32.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
....|+|+|.|+.|..+|..|...|.+|+++|+.+
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45799999999999999999999999999999864
No 446
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.52 E-value=0.053 Score=50.02 Aligned_cols=31 Identities=23% Similarity=0.341 Sum_probs=29.3
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+|+|||+|-.|+.+|..|++ |++|+++++.+
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999875
No 447
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=93.49 E-value=0.073 Score=45.82 Aligned_cols=32 Identities=16% Similarity=0.388 Sum_probs=29.9
Q ss_pred cEEEEcCCHHHHHHHHHHHHcC-CcEEEEccCC
Q 035933 9 KAIIVGGSIAGISCAKALILAG-WDVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g-~~v~i~E~~~ 40 (405)
+|.|||+|--|...|..|++.| ++|+++++.+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 9999999864
No 448
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=93.49 E-value=0.092 Score=46.79 Aligned_cols=35 Identities=17% Similarity=0.494 Sum_probs=31.4
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
...+|+|||+|-.|.++|..|+.+|+ +++++|...
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 45799999999999999999999998 899999863
No 449
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=93.47 E-value=0.07 Score=47.26 Aligned_cols=33 Identities=33% Similarity=0.372 Sum_probs=30.2
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcC--CcEEEEccCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAG--WDVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g--~~v~i~E~~~ 40 (405)
++|+|||+|-.|.++|..|++.| .+|+++|+..
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 37999999999999999999999 6899999864
No 450
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=93.47 E-value=0.073 Score=46.59 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=30.0
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHc--CCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILA--GWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~--g~~v~i~E~~~ 40 (405)
..+|.|||+|--|.+.|..|++. |.+|.++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 35899999999999999999988 67999998764
No 451
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.45 E-value=0.073 Score=46.74 Aligned_cols=33 Identities=18% Similarity=0.261 Sum_probs=30.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+|.|||+|--|...|..|.+.|++|+++++.+.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 34 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFPD 34 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSSTH
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 699999999999999999999999999998753
No 452
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=93.44 E-value=0.11 Score=45.76 Aligned_cols=35 Identities=17% Similarity=0.289 Sum_probs=32.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
...+|+|||+|..|..+|..|...|.+|+++++..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 45789999999999999999999999999999864
No 453
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=93.42 E-value=0.084 Score=45.96 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=29.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
+|.|||+|.-|.+.|..|++.|+ +|+++++.+
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 79999999999999999999998 899998864
No 454
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=93.38 E-value=0.099 Score=44.31 Aligned_cols=42 Identities=21% Similarity=0.425 Sum_probs=31.8
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
|..|.+.+.|+|.|| |-.|..+|..|+++|++|+++.|+...
T Consensus 1 M~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 43 (241)
T 1dhr_A 1 MAASGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENE 43 (241)
T ss_dssp -----CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCT
T ss_pred CCccCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhh
Confidence 555555568999986 568999999999999999999988653
No 455
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=93.37 E-value=0.12 Score=44.29 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=31.9
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
|++.++.+.|+|.|| |-.|..+|..|+++|++|+++.++..
T Consensus 1 M~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 42 (257)
T 3tpc_A 1 MVMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPP 42 (257)
T ss_dssp ---CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 554445567888887 56799999999999999999998765
No 456
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=93.31 E-value=0.072 Score=46.48 Aligned_cols=36 Identities=22% Similarity=0.244 Sum_probs=32.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
++.+|+|||+|-.|..+|..|++.|+ +++|+|...-
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 45799999999999999999999998 8999998753
No 457
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=93.30 E-value=0.084 Score=49.93 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=31.4
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++|.|||+|.-|..+|..|++.|++|++++|.+.
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~~ 36 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 36 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998753
No 458
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=93.30 E-value=0.045 Score=50.57 Aligned_cols=30 Identities=20% Similarity=0.243 Sum_probs=28.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHH-cCCcEEEEc
Q 035933 8 PKAIIVGGSIAGISCAKALIL-AGWDVVVIE 37 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~-~g~~v~i~E 37 (405)
++|+|||+|..|.++|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 379999999999999999998 599999999
No 459
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=93.29 E-value=0.097 Score=46.58 Aligned_cols=36 Identities=19% Similarity=0.397 Sum_probs=32.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
+..+|+|||+|-.|..+|..|++.|+ +++|+|...-
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 35799999999999999999999998 7889998753
No 460
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=93.26 E-value=0.1 Score=43.35 Aligned_cols=33 Identities=27% Similarity=0.329 Sum_probs=30.3
Q ss_pred cEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 9 KAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 35 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAG 35 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSH
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCch
Confidence 6999996 99999999999999999999998753
No 461
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=93.24 E-value=0.076 Score=46.05 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=31.8
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
...+|+|+|+|-+|.++|..|++.|.+|+|+.|..
T Consensus 118 ~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 118 PNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34689999999999999999999999999998874
No 462
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=93.24 E-value=0.082 Score=45.91 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=31.1
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
..+|+|||+|-+|.+.|..|.+.|.+|++++|..
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3689999999999999999999999999999864
No 463
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.20 E-value=0.12 Score=46.11 Aligned_cols=37 Identities=11% Similarity=0.206 Sum_probs=32.6
Q ss_pred CCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 4 RMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 4 ~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
.++.+.|+|.|| |..|..++..|.++|++|+++.|..
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 45 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA 45 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 345578999998 9999999999999999999998864
No 464
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=93.20 E-value=0.13 Score=44.08 Aligned_cols=40 Identities=28% Similarity=0.361 Sum_probs=33.6
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|+..|+.+.|+|.|| |-.|..+|..|+++|++|+++.|+.
T Consensus 1 m~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~ 41 (264)
T 2pd6_A 1 MQNRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDR 41 (264)
T ss_dssp CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence 565566678999986 6789999999999999999998864
No 465
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=93.17 E-value=0.13 Score=46.52 Aligned_cols=37 Identities=27% Similarity=0.382 Sum_probs=32.2
Q ss_pred CCCCcEEEEcC-CHHHHHHHHHHHH--cCCcEEEEccCCC
Q 035933 5 MRKPKAIIVGG-SIAGISCAKALIL--AGWDVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGa-G~aGl~~A~~L~~--~g~~v~i~E~~~~ 41 (405)
|+.+.|+|.|| |..|..++..|.+ .|++|+++.|...
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~ 47 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRS 47 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCc
Confidence 34578999976 9999999999999 8999999998654
No 466
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=93.15 E-value=0.074 Score=46.48 Aligned_cols=32 Identities=22% Similarity=0.231 Sum_probs=29.6
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+|.|||+|..|...|..|.+ |++|+++++.+.
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~~ 34 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTFE 34 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSSTH
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCHH
Confidence 69999999999999999999 999999998653
No 467
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=93.06 E-value=0.14 Score=43.95 Aligned_cols=40 Identities=23% Similarity=0.346 Sum_probs=32.9
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|++.++.+.|+|.|| |-.|..+|..|+++|++|+++.|+.
T Consensus 1 m~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (263)
T 3ai3_A 1 MDMGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQV 41 (263)
T ss_dssp CCCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 554455677899987 6789999999999999999998864
No 468
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=93.06 E-value=0.11 Score=46.60 Aligned_cols=35 Identities=29% Similarity=0.223 Sum_probs=31.6
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..+|.|||+|--|.+.|..|++.|++|+++++.+.
T Consensus 16 ~~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~~ 50 (338)
T 1np3_A 16 GKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGS 50 (338)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTC
T ss_pred CCEEEEECchHHHHHHHHHHHHCcCEEEEEECChH
Confidence 35799999999999999999999999999998753
No 469
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=93.06 E-value=0.11 Score=46.63 Aligned_cols=37 Identities=22% Similarity=0.469 Sum_probs=31.8
Q ss_pred CCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 5 MRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 5 ~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
++.++|+|.|| |..|..++..|.++|++|+++.|...
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 62 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFT 62 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 44578999998 99999999999999999999998643
No 470
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.97 E-value=0.074 Score=46.13 Aligned_cols=35 Identities=20% Similarity=0.168 Sum_probs=31.8
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
..+|+|+|+|-+|.++|..|++.|. +|+|+.|...
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 4689999999999999999999999 8999988754
No 471
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.97 E-value=0.098 Score=44.71 Aligned_cols=35 Identities=23% Similarity=0.253 Sum_probs=31.6
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
...+|+|||+|-.|..+|..|++.|+ +++|+|...
T Consensus 27 ~~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 27 LDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp HTCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred hcCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 35799999999999999999999998 788998875
No 472
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=92.91 E-value=0.14 Score=43.94 Aligned_cols=40 Identities=25% Similarity=0.328 Sum_probs=31.3
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|+..++.+.|+|.|| |-.|..+|..|+++|++|++++++.
T Consensus 2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 42 (259)
T 4e6p_A 2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDI 42 (259)
T ss_dssp --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 443345567899987 5689999999999999999998864
No 473
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=92.88 E-value=0.1 Score=49.13 Aligned_cols=36 Identities=31% Similarity=0.272 Sum_probs=32.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
....|+|||+|..|..+|..|+..|.+|+++|+.+.
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~ 308 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPI 308 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 456899999999999999999999999999998753
No 474
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=92.85 E-value=0.11 Score=43.99 Aligned_cols=40 Identities=20% Similarity=0.311 Sum_probs=32.9
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
|+..++.+.|+|.|| |-.|..+|..|+++|++|+++.|+.
T Consensus 1 m~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~ 41 (248)
T 2pnf_A 1 MEIKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSG 41 (248)
T ss_dssp CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCh
Confidence 665555667888876 6789999999999999999998864
No 475
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=92.83 E-value=0.14 Score=44.57 Aligned_cols=35 Identities=23% Similarity=0.270 Sum_probs=31.3
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
....|+|+|+|-+|.+++..|++.|. +|+|+.|..
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 45789999999999999999999999 699998864
No 476
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.80 E-value=0.12 Score=46.02 Aligned_cols=35 Identities=29% Similarity=0.510 Sum_probs=30.9
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC--cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW--DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~--~v~i~E~~~ 40 (405)
++.+|+|||||-.|.++|..|+..++ ++.++|...
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 45799999999999999999999886 899999853
No 477
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=92.77 E-value=0.14 Score=45.29 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=31.7
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
...+|+|+|+|-+|.++|..|++.|. +|+|+.|.+
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 45689999999999999999999999 899998874
No 478
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=92.77 E-value=0.14 Score=44.96 Aligned_cols=33 Identities=21% Similarity=0.512 Sum_probs=30.9
Q ss_pred cEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 9 KAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+|+|.|| |..|..++..|.++|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 6999999 99999999999999999999988765
No 479
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=92.77 E-value=0.14 Score=45.75 Aligned_cols=36 Identities=28% Similarity=0.495 Sum_probs=32.1
Q ss_pred CCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+.+.|+|.|| |-.|..++..|.++|++|+++.|...
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 40 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVN 40 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSS
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCc
Confidence 3468999996 99999999999999999999998764
No 480
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.75 E-value=0.11 Score=51.73 Aligned_cols=34 Identities=35% Similarity=0.574 Sum_probs=31.8
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.+|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 5799999999999999999999999999999754
No 481
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=92.73 E-value=0.13 Score=42.85 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=30.0
Q ss_pred cEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 9 KAIIVGG-SIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5999998 9999999999999999999999874
No 482
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=92.68 E-value=0.12 Score=49.99 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=33.1
Q ss_pred CcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCCC
Q 035933 8 PKAIIVGGSIAGISCAKALILAGWDVVVIEKTRGP 42 (405)
Q Consensus 8 ~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~~ 42 (405)
.+|+|||+|..|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 68999999999999999999999999999998874
No 483
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=92.65 E-value=0.082 Score=47.26 Aligned_cols=33 Identities=9% Similarity=0.014 Sum_probs=29.8
Q ss_pred CCcEEEEcC-CHHHHHHHHHHHHcCC-------cEEEEccC
Q 035933 7 KPKAIIVGG-SIAGISCAKALILAGW-------DVVVIEKT 39 (405)
Q Consensus 7 ~~~V~IiGa-G~aGl~~A~~L~~~g~-------~v~i~E~~ 39 (405)
..+|+|+|| |..|..++..|...|+ +|.++|..
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 469999998 9999999999999886 79999876
No 484
>2dzd_A Pyruvate carboxylase; biotin carboxylase, ligase; 2.40A {Geobacillus thermodenitrificans}
Probab=92.63 E-value=0.072 Score=50.15 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=33.0
Q ss_pred CCCCCCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 1 MRERMRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 1 m~~~~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
|+.+|+ ++|+|+|+|..+..++..+++.|++|++++..+.
T Consensus 1 m~~~~~-k~ILI~g~g~~~~~i~~a~~~~G~~vv~v~~~~~ 40 (461)
T 2dzd_A 1 METRRI-RKVLVANRGEIAIRVFRACTELGIRTVAIYSKED 40 (461)
T ss_dssp --CCCC-SEEEECSCHHHHHHHHHHHHHHTCEEEEEECGGG
T ss_pred CCCCcC-cEEEEECCcHHHHHHHHHHHHcCCEEEEEECCcc
Confidence 777664 5899999999999999999999999999976543
No 485
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=92.61 E-value=0.11 Score=49.01 Aligned_cols=32 Identities=25% Similarity=0.361 Sum_probs=30.3
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+|.|||+|--|..+|..|++.|++|++++|.+
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 79999999999999999999999999999864
No 486
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=92.55 E-value=0.13 Score=45.51 Aligned_cols=33 Identities=30% Similarity=0.633 Sum_probs=29.8
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
+|+|||||..|..+|..|+..|+ ++.++|....
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~~ 34 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTPG 34 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSSTT
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCChh
Confidence 58999999999999999999898 6999998753
No 487
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=92.48 E-value=0.14 Score=47.14 Aligned_cols=36 Identities=33% Similarity=0.307 Sum_probs=32.7
Q ss_pred CCCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 5 MRKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 5 ~~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
.....|+|||.|..|..+|..|...|.+|+++|+.+
T Consensus 209 L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p 244 (436)
T 3h9u_A 209 IAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDP 244 (436)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred ccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCh
Confidence 345799999999999999999999999999999865
No 488
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=92.46 E-value=0.15 Score=45.59 Aligned_cols=35 Identities=29% Similarity=0.421 Sum_probs=31.9
Q ss_pred CCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.+.|+|.|| |..|..++..|.++|++|+++.|.+.
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSG 38 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCc
Confidence 358999998 99999999999999999999998764
No 489
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=92.43 E-value=0.14 Score=43.66 Aligned_cols=32 Identities=28% Similarity=0.388 Sum_probs=30.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 9 KAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
+|+|||+|-+|-+++..|.+.|. +|+|+.|..
T Consensus 110 ~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 89999999999999999999999 999999874
No 490
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.42 E-value=0.21 Score=44.65 Aligned_cols=36 Identities=19% Similarity=0.083 Sum_probs=32.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
..++|.|||.|-.|...|..|+..|++|+++++...
T Consensus 149 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~ 184 (334)
T 2dbq_A 149 YGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRK 184 (334)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcc
Confidence 346899999999999999999999999999998754
No 491
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=92.40 E-value=0.12 Score=44.12 Aligned_cols=39 Identities=21% Similarity=0.310 Sum_probs=31.8
Q ss_pred CCCCCCCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccC
Q 035933 1 MRERMRKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 1 m~~~~~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
|+..++.+.|+|.|| |-.|..+|..|+++|++|+++.|+
T Consensus 1 m~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 1 MFPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp -CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCC
Confidence 444345567888886 778999999999999999999987
No 492
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=92.39 E-value=0.091 Score=46.93 Aligned_cols=33 Identities=12% Similarity=0.136 Sum_probs=29.6
Q ss_pred CcEEEEcC-CHHHHHHHHHHHHcCC-------cEEEEccCC
Q 035933 8 PKAIIVGG-SIAGISCAKALILAGW-------DVVVIEKTR 40 (405)
Q Consensus 8 ~~V~IiGa-G~aGl~~A~~L~~~g~-------~v~i~E~~~ 40 (405)
++|+|+|| |..|..++..|.++|+ +|+++|+.+
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~ 45 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQ 45 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGG
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCC
Confidence 58999998 9999999999999986 899998753
No 493
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=92.37 E-value=0.17 Score=44.22 Aligned_cols=35 Identities=23% Similarity=0.321 Sum_probs=31.5
Q ss_pred CCCcEEEEc-CCHHHHHHHHHHHHcCCcEEEEccCC
Q 035933 6 RKPKAIIVG-GSIAGISCAKALILAGWDVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiG-aG~aGl~~A~~L~~~g~~v~i~E~~~ 40 (405)
+.+.|+|+| +|.+|.++|..|++.|.+|+++.|..
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 456899999 99999999999999999999998863
No 494
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=92.37 E-value=0.13 Score=46.40 Aligned_cols=36 Identities=19% Similarity=0.380 Sum_probs=32.1
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~~ 41 (405)
.+.+|+|||+|-.|..+|..|++.|. +++|+|...-
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 35799999999999999999999998 8999998643
No 495
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=92.35 E-value=0.14 Score=47.20 Aligned_cols=35 Identities=29% Similarity=0.431 Sum_probs=31.5
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
...+|+|||+|..|..+|..|...|. +|++++|..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 35689999999999999999999999 899998864
No 496
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=92.33 E-value=0.17 Score=43.78 Aligned_cols=35 Identities=17% Similarity=0.303 Sum_probs=31.2
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCC-cEEEEccCC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGW-DVVVIEKTR 40 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~-~v~i~E~~~ 40 (405)
...+|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35689999999999999999999997 899998864
No 497
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=92.32 E-value=0.17 Score=45.72 Aligned_cols=34 Identities=18% Similarity=0.106 Sum_probs=31.0
Q ss_pred CCCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccC
Q 035933 6 RKPKAIIVGGSIAGISCAKALILAGWDVVVIEKT 39 (405)
Q Consensus 6 ~~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~ 39 (405)
..+.|+|+|+|..|..+|..|.+.|.+|++.|+.
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4578999999999999999999999999998853
No 498
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=92.32 E-value=0.12 Score=44.51 Aligned_cols=30 Identities=20% Similarity=0.125 Sum_probs=28.2
Q ss_pred cEEEEcCCHHHHHHHHHHHHcCCcEEEEcc
Q 035933 9 KAIIVGGSIAGISCAKALILAGWDVVVIEK 38 (405)
Q Consensus 9 ~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~ 38 (405)
+|.|||+|--|...|..|++.|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHHCCCeEEEeCC
Confidence 699999999999999999999999999766
No 499
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=92.31 E-value=0.096 Score=47.12 Aligned_cols=36 Identities=14% Similarity=0.131 Sum_probs=32.6
Q ss_pred CCCcEEEEcC-CHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 6 RKPKAIIVGG-SIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 6 ~~~~V~IiGa-G~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
+.++|+|.|| |..|..++..|.++|++|+++.|.+.
T Consensus 24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 60 (351)
T 3ruf_A 24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFST 60 (351)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4579999996 99999999999999999999998764
No 500
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=91.50 E-value=0.025 Score=46.62 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=31.7
Q ss_pred CCcEEEEcCCHHHHHHHHHHHHcCCcEEEEccCCC
Q 035933 7 KPKAIIVGGSIAGISCAKALILAGWDVVVIEKTRG 41 (405)
Q Consensus 7 ~~~V~IiGaG~aGl~~A~~L~~~g~~v~i~E~~~~ 41 (405)
.++|.|||+|-.|.+.|..|.+.|++|++++|.+.
T Consensus 19 ~~~I~iIG~G~mG~~la~~L~~~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 19 QGVVCIFGTGDFGKSLGLKMLQCGYSVVFGSRNPQ 53 (201)
Confidence 45799999999999999999999999999988754
Done!