BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035938
(133 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P56331|IF1A_ONOVI Eukaryotic translation initiation factor 1A OS=Onobrychis
viciifolia PE=2 SV=2
Length = 145
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 101/149 (67%), Gaps = 20/149 (13%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NRKRGKN E +D KREL+ KE+GQEYA+VLRMLGNGR
Sbjct: 1 MPKNKGKGGK---NRKRGKN-EADDDKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTK 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL MHK+VWIAAGDIILVG R YQDDKADVIL PDEA+ LK GELPD TRLN
Sbjct: 57 RLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEARLLKAYGELPDNTRLN 116
Query: 112 EGL----LLILMMTP---MLFQDNDIDKI 133
EG+ L M T + F+D DIDKI
Sbjct: 117 EGIGAGGLDEEMDTANDYIEFEDEDIDKI 145
>sp|P47815|IF1A_WHEAT Eukaryotic translation initiation factor 1A OS=Triticum aestivum
PE=1 SV=2
Length = 144
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 97/151 (64%), Gaps = 25/151 (16%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NRKRGKN E +D KREL+ KE+GQEYA+V RMLGNGR
Sbjct: 1 MPKNKGKGGK---NRKRGKN-EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTK 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL MHK+VWIAAGDI+LVG R YQDDKADVIL DEA+ LK GELPD RLN
Sbjct: 57 RLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTVRLN 116
Query: 112 EGLLLILMMTP---------MLFQDNDIDKI 133
EG + + P + F+D DIDKI
Sbjct: 117 EG---VDVDGPEEGEGDSDYIQFEDEDIDKI 144
>sp|P47814|IF1A_RABIT Eukaryotic translation initiation factor 1A OS=Oryctolagus
cuniculus GN=EIF1A PE=1 SV=2
Length = 144
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 13/121 (10%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NR+RGKN E E +KREL+ KE+GQEYA+V++MLGNGRL
Sbjct: 1 MPKNKGKGGK---NRRRGKN-ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVK 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL + K+VWI DIILVG R YQD+KADVIL DEA+ LK GELP+ ++N
Sbjct: 57 RLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116
Query: 112 E 112
E
Sbjct: 117 E 117
>sp|Q5RA42|IF1AX_PONAB Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo
abelii GN=EIF1AX PE=2 SV=3
Length = 144
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 13/121 (10%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NR+RGKN E E +KREL+ KE+GQEYA+V++MLGNGRL
Sbjct: 1 MPKNKGKGGK---NRRRGKN-ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVK 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL + K+VWI DIILVG R YQD+KADVIL DEA+ LK GELP+ ++N
Sbjct: 57 RLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116
Query: 112 E 112
E
Sbjct: 117 E 117
>sp|Q8BMJ3|IF1AX_MOUSE Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus
musculus GN=Eif1ax PE=2 SV=3
Length = 144
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 13/121 (10%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NR+RGKN E E +KREL+ KE+GQEYA+V++MLGNGRL
Sbjct: 1 MPKNKGKGGK---NRRRGKN-ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVK 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL + K+VWI DIILVG R YQD+KADVIL DEA+ LK GELP+ ++N
Sbjct: 57 RLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116
Query: 112 E 112
E
Sbjct: 117 E 117
>sp|P47813|IF1AX_HUMAN Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo
sapiens GN=EIF1AX PE=1 SV=2
Length = 144
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 13/121 (10%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NR+RGKN E E +KREL+ KE+GQEYA+V++MLGNGRL
Sbjct: 1 MPKNKGKGGK---NRRRGKN-ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVK 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL + K+VWI DIILVG R YQD+KADVIL DEA+ LK GELP+ ++N
Sbjct: 57 RLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116
Query: 112 E 112
E
Sbjct: 117 E 117
>sp|O14602|IF1AY_HUMAN Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Homo
sapiens GN=EIF1AY PE=1 SV=4
Length = 144
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 13/121 (10%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NR+RGKN E E +KREL+ KE+GQEYA+V++MLGNGRL
Sbjct: 1 MPKNKGKGGK---NRRRGKN-ENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVK 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL + K+VWI DIILVG R YQD+KADVIL DEA+ LK GELP+ ++N
Sbjct: 57 RLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116
Query: 112 E 112
E
Sbjct: 117 E 117
>sp|Q6GVM3|IF1AY_PANTR Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Pan
troglodytes GN=EIF1AY PE=2 SV=3
Length = 144
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/121 (56%), Positives = 82/121 (67%), Gaps = 13/121 (10%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NR+RGKN E E +KREL+ KE+GQEYA+V++MLGNGRL
Sbjct: 1 MPKNKGKGGK---NRRRGKN-ENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVK 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL + K+VWI DIILVG R YQD+KADVIL DEA+ LK GELP+ ++N
Sbjct: 57 RLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116
Query: 112 E 112
E
Sbjct: 117 E 117
>sp|Q6VV72|IF1A_RAT Eukaryotic translation initiation factor 1A OS=Rattus norvegicus
GN=Eif1a PE=2 SV=3
Length = 144
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 13/121 (10%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NR+RGKN E E +KREL+ KE+GQEYA+V++MLGNGRL
Sbjct: 1 MPKNKGKGGK---NRRRGKN-ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVR 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL + K+VWI DIIL+G R YQD+KADVIL DEA+ LK GELP+ ++N
Sbjct: 57 RLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116
Query: 112 E 112
E
Sbjct: 117 E 117
>sp|Q60872|IF1A_MOUSE Eukaryotic translation initiation factor 1A OS=Mus musculus
GN=Eif1a PE=2 SV=3
Length = 144
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/121 (55%), Positives = 82/121 (67%), Gaps = 13/121 (10%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NR+RGKN E E +KREL+ KE+GQEYA+V++MLGNGRL
Sbjct: 1 MPKNKGKGGK---NRRRGKN-ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVR 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL + K+VWI DIIL+G R YQD+KADVIL DEA+ LK GELP+ ++N
Sbjct: 57 RLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116
Query: 112 E 112
E
Sbjct: 117 E 117
>sp|Q54YJ6|IF1A_DICDI Eukaryotic translation initiation factor 1A OS=Dictyostelium
discoideum GN=eif1a PE=3 SV=1
Length = 141
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 79/121 (65%), Gaps = 14/121 (11%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NR+RGKN +QKREL KEEGQEYA+VLRMLGNGRL
Sbjct: 1 MPKNKGKGGK---NRRRGKNEN--EQKRELQFKEEGQEYAQVLRMLGNGRLEASCFDGEK 55
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL + K+ WI GDIIL+ R YQ+DKADVIL DEA+ LK GELP+ R+N
Sbjct: 56 RLCHISGRLRKKEWINNGDIILIQLRDYQNDKADVILRYNVDEARNLKTYGELPETARIN 115
Query: 112 E 112
E
Sbjct: 116 E 116
>sp|P55877|IF1A_SCHPO Eukaryotic translation initiation factor 1A OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tif11 PE=2 SV=2
Length = 138
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 80/121 (66%), Gaps = 13/121 (10%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRL--------- 51
M NKGKGGK NR+RGKN E E++KREL EEGQ YA+V +MLGNGR+
Sbjct: 1 MPKNKGKGGK---NRRRGKN-ENENEKRELTYAEEGQMYAQVTKMLGNGRIEAACFDGVK 56
Query: 52 RLHWRHQAMHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLN 111
RL + K+VWI GDIIL+ R +QD+K DVIL T DEA+ LKN GELP+ ++N
Sbjct: 57 RLGHIRGKLRKKVWINQGDIILLSLREFQDEKGDVILKYTADEARTLKNQGELPETAKIN 116
Query: 112 E 112
E
Sbjct: 117 E 117
>sp|P38912|IF1A_YEAST Eukaryotic translation initiation factor 1A OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TIF11 PE=1
SV=1
Length = 153
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 65/101 (64%), Gaps = 9/101 (8%)
Query: 21 NEGEDQKRELIIKEEGQEYAEVLRMLGNGRL---------RLHWRHQAMHKRVWIAAGDI 71
N+ + KRELI KEEGQEYA++ +MLGNGR+ R+ + K+VW+ GDI
Sbjct: 17 NDSDGPKRELIYKEEGQEYAQITKMLGNGRVEASCFDGNKRMAHIRGKLRKKVWMGQGDI 76
Query: 72 ILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGTRLNE 112
ILV R +QDD+ DV+ DEA+ LKN GELP+ ++NE
Sbjct: 77 ILVSLRDFQDDQCDVVHKYNLDEARTLKNQGELPENAKINE 117
>sp|C3N8M9|IF1A_SULIY Translation initiation factor 1A OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=eIF1A PE=3 SV=1
Length = 108
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 19 KNNEGEDQKRELIIKEEGQEYAEVLRMLG---------NGRLRLHWRHQAMHKRVWIAAG 69
K+ E R++ EEGQ V +MLG +G+ RL + K++W+ G
Sbjct: 4 KDRAQEAPSRDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREG 63
Query: 70 DIILVGFRIYQDDKADVILINTPDEAKRLKN 100
D++LVG +Q ++ D++ DE KRL N
Sbjct: 64 DVVLVGIWDFQPNRCDILYKYGNDEIKRLVN 94
>sp|C3NMA0|IF1A_SULIN Translation initiation factor 1A OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=eIF1A PE=3 SV=1
Length = 108
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 19 KNNEGEDQKRELIIKEEGQEYAEVLRMLG---------NGRLRLHWRHQAMHKRVWIAAG 69
K+ E R++ EEGQ V +MLG +G+ RL + K++W+ G
Sbjct: 4 KDRAQEAPSRDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREG 63
Query: 70 DIILVGFRIYQDDKADVILINTPDEAKRLKN 100
D++LVG +Q ++ D++ DE KRL N
Sbjct: 64 DVVLVGIWDFQPNRCDILYKYGNDEIKRLVN 94
>sp|C3MU29|IF1A_SULIM Translation initiation factor 1A OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=eIF1A PE=3 SV=1
Length = 108
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 19 KNNEGEDQKRELIIKEEGQEYAEVLRMLG---------NGRLRLHWRHQAMHKRVWIAAG 69
K+ E R++ EEGQ V +MLG +G+ RL + K++W+ G
Sbjct: 4 KDRAQEAPSRDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREG 63
Query: 70 DIILVGFRIYQDDKADVILINTPDEAKRLKN 100
D++LVG +Q ++ D++ DE KRL N
Sbjct: 64 DVVLVGIWDFQPNRCDILYKYGNDEIKRLVN 94
>sp|C3MK60|IF1A_SULIL Translation initiation factor 1A OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=eIF1A PE=3 SV=1
Length = 108
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 19 KNNEGEDQKRELIIKEEGQEYAEVLRMLG---------NGRLRLHWRHQAMHKRVWIAAG 69
K+ E R++ EEGQ V +MLG +G+ RL + K++W+ G
Sbjct: 4 KDRAQEAPSRDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREG 63
Query: 70 DIILVGFRIYQDDKADVILINTPDEAKRLKN 100
D++LVG +Q ++ D++ DE KRL N
Sbjct: 64 DVVLVGIWDFQPNRCDILYKYGNDEIKRLVN 94
>sp|C4KK84|IF1A_SULIK Translation initiation factor 1A OS=Sulfolobus islandicus (strain
M.16.4 / Kamchatka #3) GN=eIF1A PE=3 SV=1
Length = 108
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 19 KNNEGEDQKRELIIKEEGQEYAEVLRMLG---------NGRLRLHWRHQAMHKRVWIAAG 69
K+ E R++ EEGQ V +MLG +G+ RL + K++W+ G
Sbjct: 4 KDRAQEAPSRDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREG 63
Query: 70 DIILVGFRIYQDDKADVILINTPDEAKRLKN 100
D++LVG +Q ++ D++ DE KRL N
Sbjct: 64 DVVLVGIWDFQPNRCDILYKYGNDEIKRLVN 94
>sp|C3N0P1|IF1A_SULIA Translation initiation factor 1A OS=Sulfolobus islandicus (strain
M.16.27) GN=eIF1A PE=3 SV=1
Length = 108
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 19 KNNEGEDQKRELIIKEEGQEYAEVLRMLG---------NGRLRLHWRHQAMHKRVWIAAG 69
K+ E R++ EEGQ V +MLG +G+ RL + K++W+ G
Sbjct: 4 KDRAQEAPSRDVPKPEEGQTICVVKKMLGGDHLVVLCMDGKERLARIPGKIRKKMWMREG 63
Query: 70 DIILVGFRIYQDDKADVILINTPDEAKRLKN 100
D++LVG +Q ++ D++ DE KRL N
Sbjct: 64 DVVLVGIWDFQPNRCDILYKYGNDEIKRLVN 94
>sp|Q97W62|IF1A_SULSO Translation initiation factor 1A OS=Sulfolobus solfataricus (strain
ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=eIF1A PE=3
SV=1
Length = 108
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 19 KNNEGEDQKRELIIKEEGQEYAEVLRMLG---------NGRLRLHWRHQAMHKRVWIAAG 69
K+ E R++ EEGQ V +MLG +G+ RL + K++W+ G
Sbjct: 4 KDRAQEAPSRDVPRPEEGQTICVVKKMLGGDHLIVLCMDGKERLARIPGKIRKKMWMREG 63
Query: 70 DIILVGFRIYQDDKADVILINTPDEAKRLKN 100
D++LVG +Q ++ D++ DE KRL N
Sbjct: 64 DVVLVGIWDFQPNRCDILYKYGNDEIKRLVN 94
>sp|B0R7D8|IF1A_HALS3 Translation initiation factor 1A OS=Halobacterium salinarum (strain
ATCC 29341 / DSM 671 / R1) GN=eIF1A PE=3 SV=1
Length = 95
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 27 KRELIIKEEGQEYAEVLRMLGNGRLRLHWRHQA---------MHKRVWIAAGDIILVGFR 77
++ L + E+ + +AEV MLG R+++ M KR+WI DI+LV
Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPW 67
Query: 78 IYQDDKADVILINTPDEAKRLKNIGEL 104
+QDDKADV +A +L+ G +
Sbjct: 68 DWQDDKADVTWRYEKSDADQLREEGHI 94
>sp|Q9HN64|IF1A1_HALSA Translation initiation factor 1A 1 OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=eIF1A1 PE=3
SV=1
Length = 95
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 27 KRELIIKEEGQEYAEVLRMLGNGRLRLHWRHQA---------MHKRVWIAAGDIILVGFR 77
++ L + E+ + +AEV MLG R+++ M KR+WI DI+LV
Sbjct: 8 RKNLRMPEDDEVFAEVTDMLGANRVQVRCADGEERTARIPGRMQKRIWIREDDIVLVEPW 67
Query: 78 IYQDDKADVILINTPDEAKRLKNIGEL 104
+QDDKADV +A +L+ G +
Sbjct: 68 DWQDDKADVTWRYEKSDADQLREEGHI 94
>sp|Q3IT14|IF1A_NATPD Translation initiation factor 1A OS=Natronomonas pharaonis (strain
DSM 2160 / ATCC 35678) GN=eif1a PE=3 SV=1
Length = 97
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 19 KNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRLRLHWRHQA---------MHKRVWIAAG 69
+NEG ++ L + E + +A V MLG R+++ M KR+WI
Sbjct: 2 SDNEG---RKNLRMPEGDEVFAVVTNMLGANRVKVRCMDGTERTARIPGRMQKRIWIRED 58
Query: 70 DIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPDGT 108
D++LV +QD+KADV+ EA +L+ G + D
Sbjct: 59 DVVLVEPWDWQDEKADVVWRYEKQEADQLREEGHITDSV 97
>sp|Q5UZM2|IF1A_HALMA Translation initiation factor 1A OS=Haloarcula marismortui (strain
ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=eif1a
PE=3 SV=2
Length = 95
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 25 DQKRELIIKEEGQEYAEVLRMLGNGRLRLHWRHQA---------MHKRVWIAAGDIILVG 75
D ++ L + EE + +A V+ MLG R+++ M KR+WI D++LV
Sbjct: 5 DSRKNLRMPEEDEVFAVVMDMLGANRVKVRCMDGVERTARIPGKMQKRIWIREDDVVLVE 64
Query: 76 FRIYQDDKADVILINTPDEAKRLKNIGEL 104
+QD+KAD+ +A +L+ G +
Sbjct: 65 PWDWQDEKADITWRYEKQDADQLREEGHI 93
>sp|Q8TXZ3|IF1A_METKA Translation initiation factor 1A OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=eIF1A PE=3
SV=1
Length = 111
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 9/82 (10%)
Query: 32 IKEEGQEYAEVLRMLGN---------GRLRLHWRHQAMHKRVWIAAGDIILVGFRIYQDD 82
+ +EG+ + V +MLGN G+ R+ M KRVWI GD++LV +Q +
Sbjct: 15 LPKEGEIFGVVEKMLGNDRVQVRCVDGKTRVARIPGKMRKRVWIREGDVVLVKPWEFQPE 74
Query: 83 KADVILINTPDEAKRLKNIGEL 104
+ADV T + LK G+L
Sbjct: 75 RADVTWRYTRVQVDWLKRKGKL 96
>sp|Q4JA54|IF1A_SULAC Translation initiation factor 1A OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=eif1a PE=3 SV=1
Length = 108
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 19 KNNEGEDQKRELIIKEEGQEYAEVLRMLG---------NGRLRLHWRHQAMHKRVWIAAG 69
K + E RE++ EG+ V ++ G +G+ RL + K+VWI G
Sbjct: 4 KKSNTEQPTREVVKPIEGEVICVVKKLFGGEHVQVICTDGKERLGRIPGKLKKKVWIREG 63
Query: 70 DIILVGFRIYQDDKADVILINTPDEAKRL 98
D++L +Q +K D++ T E +RL
Sbjct: 64 DVVLAAPWDFQPNKCDIVYRYTESEVRRL 92
>sp|Q6L2G4|IF1A_PICTO Translation initiation factor 1A OS=Picrophilus torridus (strain
ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828)
GN=eif1a PE=3 SV=1
Length = 108
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 33 KEEGQEYAEVLRMLGNGRLRLHWRHQA---------MHKRVWIAAGDIILVGFRIYQDDK 83
K+ G+ Y V +M G RL + M KR+WI GD+++V +QD+K
Sbjct: 17 KKSGEIYGIVEKMSGASRLIVMCEDGVTRNCRIPGKMKKRMWIREGDLVIVKPWEFQDEK 76
Query: 84 ADVILINTPDEAKRLKNIGELPD 106
D+I T +A L LP+
Sbjct: 77 GDIIYRYTKTQAAYLSRNHMLPE 99
>sp|Q974Z9|IF1A_SULTO Translation initiation factor 1A OS=Sulfolobus tokodaii (strain DSM
16993 / JCM 10545 / NBRC 100140 / 7) GN=eIF1A PE=3 SV=2
Length = 108
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 17 RGKNNEGEDQKRELIIKEEGQEYAEVLRMLG---------NGRLRLHWRHQAMHKRVWIA 67
+ K NE + +E+ EG+ V +MLG +G+ RL M K++W+
Sbjct: 3 KKKTNE-QPSVKEVPKPAEGEVICVVKKMLGAEHVQVICLDGKERLGRIPGKMKKKMWVK 61
Query: 68 AGDIILVGFRIYQDDKADVILINTPDEAKRLKN 100
GD++L +Q +K D+I + E +RL+
Sbjct: 62 EGDVVLAAPWDFQPNKCDIIYKYSESEVRRLEE 94
>sp|Q2NEP1|IF1A_METST Translation initiation factor 1A OS=Methanosphaera stadtmanae
(strain DSM 3091) GN=eif1a PE=3 SV=1
Length = 111
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 42 VLRMLGNGRLRLHWRHQA---------MHKRVWIAAGDIILVGFRIYQ-DDKADVILINT 91
V ++LG+G+L++ + M KR+WI GD++LV +Q D+KADVI T
Sbjct: 37 VEQILGHGKLKVRCNDKQIRLCRIPGKMKKRIWIREGDVVLVKPWDFQSDEKADVIWRYT 96
Query: 92 PDEAKRLKNIGEL 104
EA L+ G L
Sbjct: 97 RTEANYLERRGFL 109
>sp|A2STQ8|IF1A_METLZ Translation initiation factor 1A OS=Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z) GN=eIF1A PE=3 SV=1
Length = 105
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 11 KFKNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRLRLHWRHQA---------MH 61
+ +N + +++G + +L K +++A+ MLG+ +R+ +
Sbjct: 3 RIENDNQDVSDDGSIIRVKLPNKRIREQFAQAELMLGSNHIRVRCSDGVTRLGRIKGKIK 62
Query: 62 KRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLK 99
KRVWI GDI++V +QDDK D+I T + L+
Sbjct: 63 KRVWIREGDILIVVPWDFQDDKCDIIYRYTTPQVDWLR 100
>sp|O29481|IF1A_ARCFU Translation initiation factor 1A OS=Archaeoglobus fulgidus (strain
ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=eIF1A PE=3 SV=2
Length = 97
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 33 KEEGQEYAEVLRMLGNGRLRLHWRHQA---------MHKRVWIAAGDIILVGFRIYQDDK 83
+++G+ + V MLG G +++ M K++WI GD+++V +Q D+
Sbjct: 15 RKKGELFGVVTSMLGAGHIKVRCEDGVERLARIPGKMRKKIWIREGDVVIVVPWSFQKDR 74
Query: 84 ADVILINTPDEAKRLKNIGEL 104
AD++ T + + L+ G L
Sbjct: 75 ADIVWRYTNPQVEWLERKGYL 95
>sp|Q8TSA3|IF1A1_METAC Translation initiation factor 1A 1 OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=eIF1A1 PE=3 SV=1
Length = 111
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 33 KEEGQEYAEVLRMLGNGRLRLHWR---------HQAMHKRVWIAAGDIILVGFRIYQDDK 83
+E + A V +LG RLRL +M K+ WI GD+++V +Q++K
Sbjct: 29 RENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKTWIREGDVVIVVPWEFQNEK 88
Query: 84 ADVILINTPDEAKRLKNIGEL 104
ADVI T + L+ G L
Sbjct: 89 ADVIWKYTRPQVDWLERKGYL 109
>sp|Q979F7|IF1A_THEVO Translation initiation factor 1A OS=Thermoplasma volcanium (strain
ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1)
GN=eIF1A PE=3 SV=1
Length = 123
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 11/117 (9%)
Query: 1 MANNKGKGGKKFKNRKRGKNNEGEDQKRELII--KEEGQEYAEVLRMLGNGRLRLH---- 54
M+ +K + K N + + NE E+ +I+ K++G+ + V +M G RL +
Sbjct: 1 MSPDKTEDEDKDVNVDQDQFNEEEESLGRVILPNKKKGEMFGIVEKMEGASRLSVMCEDG 60
Query: 55 WRHQA-----MHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPD 106
+ A M KR+WI D+++V +Q +KADV+ T +A L LP+
Sbjct: 61 YTRNARIPGRMRKRMWIREKDLVIVKPWEFQPEKADVVYRYTKTQASYLSRNHMLPE 117
>sp|A4YEH8|IF1A_METS5 Translation initiation factor 1A OS=Metallosphaera sedula (strain
ATCC 51363 / DSM 5348) GN=eIF1A PE=3 SV=1
Length = 108
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 9/89 (10%)
Query: 19 KNNEGEDQKRELIIKEEGQEYAEVLRMLG---------NGRLRLHWRHQAMHKRVWIAAG 69
K+ + +++ EEG+ V +MLG +G+ R M K+ WI G
Sbjct: 4 KDRTDQAPSKDVPKPEEGEVICVVKKMLGAEHIIIACLDGKERTARIPGRMRKKTWIKEG 63
Query: 70 DIILVGFRIYQDDKADVILINTPDEAKRL 98
D++L +Q KAD++ DE ++L
Sbjct: 64 DVVLAAPWDFQPTKADIVYRYMNDEIRKL 92
>sp|Q03590|IF1A_THEAC Translation initiation factor 1A OS=Thermoplasma acidophilum
(strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 /
AMRC-C165) GN=eIF1A PE=3 SV=2
Length = 119
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Query: 13 KNRKRGKNNEGEDQKRELIIKEEGQEYAEVLRMLGNGRLRLH----WRHQA-----MHKR 63
K+ + G+ NE + L K++G+ + V +M G RL + + A M KR
Sbjct: 11 KDFESGEENEESIGRVILPNKKKGEMFGIVEKMEGASRLSVMCEDGYTRNARIPGRMRKR 70
Query: 64 VWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELPD 106
+WI D+++V +Q +KADV+ T +A L LP+
Sbjct: 71 MWIREKDLVIVKPWEFQPEKADVVYRYTKTQASYLSRNHMLPE 113
>sp|B8D5N1|IF1A_DESK1 Translation initiation factor 1A OS=Desulfurococcus kamchatkensis
(strain 1221n / DSM 18924) GN=eIF1A PE=3 SV=1
Length = 116
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 26/46 (56%)
Query: 60 MHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGELP 105
+ ++VWI GDIILVG + +K +V+ +E +L G +P
Sbjct: 60 LRRKVWITEGDIILVGLWDFSSEKGEVVYKYGKNEVNKLVEKGVVP 105
>sp|Q18EX1|IF1A1_HALWD Translation initiation factor 1A 1 OS=Haloquadratum walsbyi (strain
DSM 16790) GN=eif1a1 PE=3 SV=1
Length = 96
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 29 ELIIKEEGQEYAEVLRMLGNGRLRLHWRHQ---------AMHKRVWIAAGDIILVGFRIY 79
+L + ++ + +A V MLG R+ + M KR+WI D++LV +
Sbjct: 11 DLRMPDDDEVFAVVTNMLGANRVTVRCADGNERTARIPGRMQKRIWIREDDVVLVEPWDW 70
Query: 80 QDDKADVILINTPDEAKRLKNIGEL 104
QD+K D+ EA +L+ G +
Sbjct: 71 QDEKGDITWRYEKSEADQLREEGRI 95
>sp|Q18JF4|IF1A2_HALWD Translation initiation factor 1A 2 OS=Haloquadratum walsbyi (strain
DSM 16790) GN=eif1a2 PE=3 SV=1
Length = 94
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 60 MHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGEL 104
M R WI GD++LV +QD+KA++ + +A++L+ G +
Sbjct: 49 MKYRTWINEGDVVLVEPWAWQDEKANIEWRYSEQDAEQLRTEGHI 93
>sp|Q8PVF1|IF1A1_METMA Translation initiation factor 1A 1 OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=eIF1A1 PE=3 SV=2
Length = 111
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 33 KEEGQEYAEVLRMLGNGRLRLHWR---------HQAMHKRVWIAAGDIILVGFRIYQDDK 83
+E + A V +LG RLRL +M K+ WI GD+++ +Q++K
Sbjct: 29 RENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKAWIREGDVVIAVPWEFQNEK 88
Query: 84 ADVILINTPDEAKRLKNIGEL 104
ADVI T + L+ G L
Sbjct: 89 ADVIWKYTRPQVDWLERKGYL 109
>sp|O27085|IF1A_METTH Translation initiation factor 1A OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=eIF1A PE=3 SV=1
Length = 99
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 46 LGNGRLRLHWRHQAMHKRVWIAAGDIILV-GFRIYQDDKADVILINTPDEAKRLKNIGEL 104
+G +RL M KR+WI GD++LV + ++KAD++ T E+ L+ G L
Sbjct: 38 CADGHIRLGRIPGKMKKRIWIREGDVVLVKPWEFQSEEKADIVWRYTRTESNWLERKGYL 97
>sp|Q469J2|IF1A1_METBF Translation initiation factor 1A 1 OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=eif1a1 PE=3 SV=1
Length = 96
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 17/85 (20%)
Query: 33 KEEGQEYAEVLRMLGNGRLRLHWRHQAM-------------HKRVWIAAGDIILVGFRIY 79
+E + A V +LG+ R+ L Q M +K++WI GD+++V
Sbjct: 15 RENHEVLATVSSLLGSKRVTL----QCMDGVVRMGRIPGSKNKKMWIHEGDVVIVAPWDI 70
Query: 80 QDDKADVILINTPDEAKRLKNIGEL 104
QD KADVI T + + L+ G L
Sbjct: 71 QDSKADVIWKYTRPQVEWLERKGYL 95
>sp|Q469I9|IF1A2_METBF Translation initiation factor 1A 2 OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=eif1a2 PE=3 SV=1
Length = 115
Score = 32.7 bits (73), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
Query: 33 KEEGQEYAEVLRMLGNGRLRLHWRHQAM-------------HKRVWIAAGDIILVGFRIY 79
K+ + A VL +LG+ R+ L Q M KR+WI GDI++
Sbjct: 34 KDRNEVLATVLNLLGSKRVTL----QCMDGVVRMGRIPGSKKKRMWIREGDIVIANPWEI 89
Query: 80 QDDKADVILINTPDEAKRLKNIGEL 104
QD KADV T + + L+ G L
Sbjct: 90 QDSKADVTWKYTRPQVEWLERKGYL 114
>sp|Q12YN5|IF1A_METBU Translation initiation factor 1A OS=Methanococcoides burtonii
(strain DSM 6242) GN=eif1a PE=3 SV=1
Length = 106
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 62 KRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGEL 104
KR+W+ GDI+++ +QD KA+VI T + + L+ G L
Sbjct: 63 KRMWVREGDIVIITPWDFQDSKAEVIWKYTRPQVEWLERKGFL 105
>sp|Q8TR33|IF1A2_METAC Translation initiation factor 1A 2 OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=eIF1A2 PE=3 SV=1
Length = 105
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 17/85 (20%)
Query: 33 KEEGQEYAEVLRMLGNGRLRLHWRHQAM-------------HKRVWIAAGDIILVGFRIY 79
KE + A V +LG+ R+ L Q M +K++WI GD+++V
Sbjct: 24 KENHEVLATVGSLLGSKRVNL----QCMDGVVRMGRIPGSKNKKMWIREGDVVIVTPWEI 79
Query: 80 QDDKADVILINTPDEAKRLKNIGEL 104
QD KADVI T + + L+ G L
Sbjct: 80 QDTKADVIWKYTRPQIEWLERKGYL 104
>sp|Q9HP87|IF1A2_HALSA Translation initiation factor 1A 2 OS=Halobacterium salinarum
(strain ATCC 700922 / JCM 11081 / NRC-1) GN=eIF1A2 PE=3
SV=2
Length = 94
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 60 MHKRVWIAAGDIILVGFRIYQDDKADVILINTPDEAKRLKNIGEL 104
M R WI GD++L +QD+KA+V + +A +L+ G +
Sbjct: 49 MKYRTWINEGDVVLAEPWDWQDEKANVEWRYSDQDADQLREEGHI 93
>sp|Q8TR31|IF1A3_METAC Translation initiation factor 1A 3 OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A)
GN=eIF1A3 PE=3 SV=1
Length = 110
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 9/81 (11%)
Query: 33 KEEGQEYAEVLRMLGNGRLRLHWRHQAM---------HKRVWIAAGDIILVGFRIYQDDK 83
K+ + A V +LG+ R+ L + +K++W+ GD+++ QD K
Sbjct: 29 KDRNEVLATVASLLGSKRVTLQCMDGVVRMGRIPGSKNKKMWVREGDVVIANPWEIQDSK 88
Query: 84 ADVILINTPDEAKRLKNIGEL 104
ADVI T + L+ G L
Sbjct: 89 ADVIWKYTKPQVDWLERKGYL 109
>sp|Q8PUJ8|IF1A2_METMA Translation initiation factor 1A 2 OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=eIF1A2 PE=3 SV=1
Length = 106
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 33 KEEGQEYAEVLRMLGNGRLRLHWRHQAM-------------HKRVWIAAGDIILVGFRIY 79
KE + A V +LG+ R+ L Q M +K++WI GDI++
Sbjct: 25 KENHEVLATVGSLLGSKRVNL----QCMDGVVRMGRIPGSKNKKMWIREGDIVIATPWEI 80
Query: 80 QDDKADVILINTPDEAKRLKNIGEL 104
QD KADVI T + + L+ G L
Sbjct: 81 QDSKADVIWKYTRPQIEWLERKGYL 105
>sp|Q57887|IF1A_METJA Translation initiation factor 1A OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=eIF1A PE=1 SV=1
Length = 102
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 33 KEEGQEYAEVLRMLGNGRLRLHWRHQA---------MHKRVWIAAGDIILV-GFRIYQDD 82
KEE + + +MLG R+R+ + R+W+ GD+++V + + D
Sbjct: 17 KEENEILGIIEQMLGASRVRVRCLDGKTRLGRIPGRLKNRIWVREGDVVIVKPWEVQGDQ 76
Query: 83 KADVILINTPDEAKRLKNIGEL 104
K D+I T + + LK G L
Sbjct: 77 KCDIIWRYTKTQVEWLKRKGYL 98
>sp|P57676|IF1A_AERPE Translation initiation factor 1A OS=Aeropyrum pernix (strain ATCC
700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
GN=eIF1A PE=3 SV=1
Length = 111
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 23 GEDQKRELIIKEE--GQEYAEVLRMLGNGRLRLHWRHQAMHKRVWIAAGDIILVGFRIYQ 80
ED+ L I + G + EVL +G + + M +RVW+ GD++L
Sbjct: 18 SEDEGTMLCIVQRVVGAGFLEVL--CTDGEVYMARIPGKMRRRVWMREGDVVLFLPWGTA 75
Query: 81 DDKADVILINTPDEAKRLKNIGELPD 106
D K +V+ DE ++L ++ LP+
Sbjct: 76 DKKGEVVYRYLRDEVRKLIDMNLLPE 101
>sp|Q39ZT9|ATPA1_PELCD ATP synthase subunit alpha 1/3 OS=Pelobacter carbinolicus (strain
DSM 2380 / Gra Bd 1) GN=atpA1 PE=3 SV=1
Length = 502
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 10/92 (10%)
Query: 24 EDQKRELIIKEEGQEYAEVLRMLGNGRLRLHWRHQAMHKRVWIAAGDIILVGFRIYQDDK 83
E+ RE+ I E G + +G+G R+H ++AM + GD+I + + +D+
Sbjct: 17 ENFDREIEISEMG-----TIISVGDGIARIHGLNRAMAGELLEFPGDVIGMVLNLEEDNV 71
Query: 84 ADVIL-----INTPDEAKRLKNIGELPDGTRL 110
IL I D +R I E+P G L
Sbjct: 72 GAAILGDTHHIKEGDSVRRTGRIVEVPVGEAL 103
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.140 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,581,597
Number of Sequences: 539616
Number of extensions: 2392458
Number of successful extensions: 6633
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 6531
Number of HSP's gapped (non-prelim): 73
length of query: 133
length of database: 191,569,459
effective HSP length: 99
effective length of query: 34
effective length of database: 138,147,475
effective search space: 4697014150
effective search space used: 4697014150
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)