Query 035945
Match_columns 119
No_of_seqs 51 out of 53
Neff 2.8
Searched_HMMs 46136
Date Fri Mar 29 07:53:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035945.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035945hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF08472 S6PP_C: Sucrose-6-pho 100.0 3.7E-51 7.9E-56 306.9 8.9 82 1-82 51-133 (133)
2 PLN02382 probable sucrose-phos 100.0 2.3E-33 5.1E-38 233.4 9.4 84 1-84 312-396 (413)
3 PF14534 DUF4440: Domain of un 75.3 9.8 0.00021 23.7 4.8 60 2-67 21-80 (107)
4 PF14437 MafB19-deam: MafB19-l 60.6 9.5 0.00021 29.6 2.9 69 13-116 73-144 (146)
5 PF06985 HET: Heterokaryon inc 23.3 63 0.0014 21.6 1.8 34 13-52 22-55 (139)
6 smart00773 WGR Proposed nuclei 20.6 88 0.0019 20.6 2.0 30 8-40 48-77 (84)
7 COG4460 Uncharacterized protei 20.3 3.8E+02 0.0082 20.8 5.6 76 5-82 35-113 (130)
8 PF15008 DUF4518: Domain of un 19.7 48 0.001 27.8 0.7 54 1-67 205-259 (262)
9 PRK09731 putative general secr 19.2 1.3E+02 0.0028 23.8 3.0 32 18-49 99-136 (178)
10 KOG2961 Predicted hydrolase (H 19.0 84 0.0018 25.6 1.9 28 4-36 54-81 (190)
No 1
>PF08472 S6PP_C: Sucrose-6-phosphate phosphohydrolase C-terminal; InterPro: IPR013679 This is the Sucrose-6-phosphate phosphohydrolase (S6PP or SPP) C-terminal domain [] as found in plant sucrose phosphatases. These enzymes irreversibly catalyse the last step in sucrose synthesis following the formation of Sucrose-6-Phosphate via sucrose-phosphate synthase (SPS). ; GO: 0000287 magnesium ion binding, 0050307 sucrose-phosphate phosphatase activity, 0005986 sucrose biosynthetic process
Probab=100.00 E-value=3.7e-51 Score=306.90 Aligned_cols=82 Identities=50% Similarity=0.848 Sum_probs=81.2
Q ss_pred CccccCCCCcEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEEcceeeeCcee-eEEEEEEe
Q 035945 1 MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSP-LHITLVLA 79 (119)
Q Consensus 1 lKs~~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~sg~Er-cclTT~ll 79 (119)
||+++||+|++|||||+|+|||++||+||+||||||||+||+|||||+++|+|+|+|||||||||++|+|| ||+|||+|
T Consensus 51 LK~~~~~~g~~vhPsGvE~slh~~Id~Lr~~yGdkqgK~frvWVDrv~~~~v~~~~WLvkFdkWE~sg~e~~cc~tT~ll 130 (133)
T PF08472_consen 51 LKSVCHPNGTFVHPSGVEKSLHDSIDALRSCYGDKQGKKFRVWVDRVRSTQVGSDTWLVKFDKWELSGEERRCCLTTALL 130 (133)
T ss_pred hhhhhccCcCEEccccccccHHHHHHHHHHHhhhhcCcEEEEEEEeeeEEeecCccEEEEeeehhccCCeeEEEEEEEEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred ecc
Q 035945 80 SAF 82 (119)
Q Consensus 80 ~~k 82 (119)
++|
T Consensus 131 ~~K 133 (133)
T PF08472_consen 131 SSK 133 (133)
T ss_pred eeC
Confidence 987
No 2
>PLN02382 probable sucrose-phosphatase
Probab=100.00 E-value=2.3e-33 Score=233.42 Aligned_cols=84 Identities=48% Similarity=0.836 Sum_probs=82.2
Q ss_pred CccccCCCCcEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEEcceeeeCcee-eEEEEEEe
Q 035945 1 MKCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSP-LHITLVLA 79 (119)
Q Consensus 1 lKs~~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~sg~Er-cclTT~ll 79 (119)
||+.++|+++||||+|+|.|+|++|+.||+|||+||||+||||||+|+.+++++++|||||||||++|+|| ||+|||+|
T Consensus 312 l~~~~~p~~~~v~p~G~~~~~~~~~~~~~~~~G~~~g~~~~i~vd~~~~~~~~~~~~~v~~~e~q~~~~~~~~~~ttavl 391 (413)
T PLN02382 312 LKSSCAPNGVFVHPSGVEKSLHDSIDELRSCYGDKKGKKFRVWVDRVLSTQLGPDTWLVKFDKWEQSGDERKCCLTTALL 391 (413)
T ss_pred HHHhcCCCeeEECCCcccCCHHHHHHHHHHhhCCCCCCEEEEEEeeEEEEEEcCCeEEEEEeeeeecCCcceeEEEEEEE
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred ecccc
Q 035945 80 SAFWD 84 (119)
Q Consensus 80 ~~k~d 84 (119)
++|.|
T Consensus 392 ~~~~~ 396 (413)
T PLN02382 392 TSKED 396 (413)
T ss_pred eeCCC
Confidence 99964
No 3
>PF14534 DUF4440: Domain of unknown function (DUF4440); PDB: 3HX8_A 3SOY_A 3ROB_B 3GZR_A 3B7C_A 3CU3_A 3FSD_A 2R4I_C 1TP6_A.
Probab=75.33 E-value=9.8 Score=23.66 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=39.6
Q ss_pred ccccCCCCcEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEEcceeee
Q 035945 2 KCQNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESS 67 (119)
Q Consensus 2 Ks~~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~s 67 (119)
.+..+|+.+++||.|...+-.+.++.+.+.+... ..+ -.+.+....+ .|+=++... |...
T Consensus 21 ~~~~~~d~~~~~~~g~~~~~~~~l~~~~~~~~~~--~~~--~~~~~~v~~~-gd~a~~~~~-~~~~ 80 (107)
T PF14534_consen 21 ASLYADDFVFVGPGGTILGKEAILAAFKSGFARF--SSI--KFEDVEVRVL-GDTAVVRGR-WTFT 80 (107)
T ss_dssp HTTEEEEEEEEETTSEEEEHHHHHHHHHHHCEEE--EEE--EEEEEEEEEE-TTEEEEEEE-EEEE
T ss_pred HhhhCCCEEEECCCCCEeCHHHHHHHHhhccCCC--ceE--EEEEEEEEEE-CCEEEEEEE-EEEE
Confidence 3557899999999998899999999998854322 333 2333444444 444455555 5544
No 4
>PF14437 MafB19-deam: MafB19-like deaminase
Probab=60.61 E-value=9.5 Score=29.56 Aligned_cols=69 Identities=23% Similarity=0.394 Sum_probs=49.9
Q ss_pred ccCCCccchHHHHHHhHhhh--cccCCceEEEEEEeeeeeeeeCceEEEEEcceeeeCceeeEEEEEEeecccchHHHHH
Q 035945 13 HPSGTEQSMHQCLDLMENLY--GDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESSECSPLHITLVLASAFWDLFVIKW 90 (119)
Q Consensus 13 HPsGvE~sLh~~Id~Lr~~y--GdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~sg~ErcclTT~ll~~k~d~~~~~w 90 (119)
+|-+.-.+.|++|++|..-| |..+|+.-.+||||-.= ..| +.|+.. =
T Consensus 73 ~pn~~~~~~HAE~~aiqqA~d~G~~~g~~~tm~Vdr~vC---------------------~~C--------~~~i~~--~ 121 (146)
T PF14437_consen 73 GPNNNMAKAHAEAGAIQQAYDAGKTVGRSMTMYVDRDVC---------------------GYC--------GGDIPS--M 121 (146)
T ss_pred CccchhHHHHHHHHHHHHHHHhcCccCCeEEEEECcccc---------------------hHH--------HHHHHH--H
Confidence 55677788999999998766 77779999999975210 123 255543 4
Q ss_pred HHhhCCCceeeeehhccc-cCceeEEE
Q 035945 91 RKQFNLGKFIIELRKIFP-TGSVMMWQ 116 (119)
Q Consensus 91 ~~q~~~~~~i~~~~~~~~-~~~~~~~~ 116 (119)
.++.|+.+-+|- .| +|.+++|+
T Consensus 122 a~~lGl~~L~I~----~~~sG~~~~~~ 144 (146)
T PF14437_consen 122 AEKLGLKSLTIH----EPDSGKVYYWQ 144 (146)
T ss_pred HHHcCCCeEEEE----ecCCCcEEEec
Confidence 578888887764 45 88899887
No 5
>PF06985 HET: Heterokaryon incompatibility protein (HET); InterPro: IPR010730 This entry represents a conserved region approximately 150 residues long within various heterokaryon incompatibility proteins that seem to be restricted to ascomycete fungi. Genetic differences in specific het genes prevent a viable heterokaryotic fungal cell from being formed by the fusion of filaments from two different wild-type strains []. Many proteins of this entry also contain the WD domain, G-beta IPR001680 from INTERPRO repeat and the NACHT IPR007111 from INTERPRO domain.
Probab=23.30 E-value=63 Score=21.62 Aligned_cols=34 Identities=18% Similarity=0.389 Sum_probs=26.3
Q ss_pred ccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeee
Q 035945 13 HPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQI 52 (119)
Q Consensus 13 HPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqi 52 (119)
.+..+-.++++++..+|. .|- -.+|||.+-.-|-
T Consensus 22 ~~~~~~~~l~~al~~~r~-----~~~-~ylWID~lCI~Q~ 55 (139)
T PF06985_consen 22 DPLSLPENLQDALRIARA-----LGI-RYLWIDALCINQD 55 (139)
T ss_pred cccchhHHHHHHHHHhhc-----ccc-eeeecCcccEEcc
Confidence 456777889999999988 222 3599999988874
No 6
>smart00773 WGR Proposed nucleic acid binding domain. This domain is named after its most conserved central motif. It is found in a variety of polyA polymerases as well as in molybdate metabolism regulators (e.g. in E.coli) and other proteins of unknown function. The domain is found in isolation in some proteins and is between 70 and 80 residues in length. It is proposed that it may be a nucleic acid binding domain.
Probab=20.62 E-value=88 Score=20.62 Aligned_cols=30 Identities=17% Similarity=0.248 Sum_probs=24.9
Q ss_pred CCcEEccCCCccchHHHHHHhHhhhcccCCceE
Q 035945 8 LGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQY 40 (119)
Q Consensus 8 ~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkF 40 (119)
+++.+.|.+ |+.+++.++.+.+-+|.||-|
T Consensus 48 g~~~~~~~~---s~~~A~~~f~k~~~~Kt~~gy 77 (84)
T smart00773 48 GQTKLETFD---SLEDAIKEFEKLFKEKTKNGY 77 (84)
T ss_pred CceeeEcCC---CHHHHHHHHHHHHHHHhcCCC
Confidence 556666655 899999999999999999875
No 7
>COG4460 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.27 E-value=3.8e+02 Score=20.76 Aligned_cols=76 Identities=11% Similarity=-0.024 Sum_probs=57.9
Q ss_pred cCCCCcEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEEcceeee--Ccee-eEEEEEEeec
Q 035945 5 NYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESS--ECSP-LHITLVLASA 81 (119)
Q Consensus 5 ~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~s--g~Er-cclTT~ll~~ 81 (119)
.+.+=++|-|+|+...--+-+|-.|+.-|-.- -|++=||-|+.---+.|.=.+.+-.=|+- |..+ -...|++++.
T Consensus 35 faedftMitP~GviLD~~Alg~~frs~racrp--Gl~I~ie~i~l~a~~~dga~l~YrE~Q~~a~g~se~~r~stv~l~r 112 (130)
T COG4460 35 FAEDFTMITPSGVILDRDALGDHFRSSRACRP--GLAISIEDIRLGAQTEDGAVLLYREAQLRAGGHSERQRSSTVTLSR 112 (130)
T ss_pred HhcCceEecCCceEeccHHHHHHHHhccCCCC--CeEEEEecccccccCCCceeeeehHhhhhccCccceeeeeEEEEee
Confidence 35566899999999999999999999888444 47888899888777777777777766643 3333 6788888876
Q ss_pred c
Q 035945 82 F 82 (119)
Q Consensus 82 k 82 (119)
.
T Consensus 113 ~ 113 (130)
T COG4460 113 S 113 (130)
T ss_pred c
Confidence 4
No 8
>PF15008 DUF4518: Domain of unknown function (DUF4518)
Probab=19.69 E-value=48 Score=27.84 Aligned_cols=54 Identities=20% Similarity=0.433 Sum_probs=43.9
Q ss_pred CccccCCCC-cEEccCCCccchHHHHHHhHhhhcccCCceEEEEEEeeeeeeeeCceEEEEEcceeee
Q 035945 1 MKCQNYSLG-IIAHPSGTEQSMHQCLDLMENLYGDKQGKQYRVWVDRVSSAQIGLDAWLVKFDKWESS 67 (119)
Q Consensus 1 lKs~~~p~g-t~VHPsGvE~sLh~~Id~Lr~~yGdKqGKkFRvWVDrV~~tqigsdtWLVKFDKWE~s 67 (119)
+|....|.| ++|+-.|+-++=+.|+-+....+|--+ .+..+++|=.||-|=.+-
T Consensus 205 ~k~~~~phGlV~V~v~GTvH~~~~ClGiFEq~FGLiR-------------dP~~~N~WKiK~~~l~i~ 259 (262)
T PF15008_consen 205 VKGRISPHGLVLVAVCGTVHRDNTCLGIFEQIFGLIR-------------DPFAENNWKIKFVNLRIR 259 (262)
T ss_pred cceEEcCCCcEEEEEeeeEecCCceEeehhhhhhccc-------------CccccCceeEEEEEEEEE
Confidence 466678888 999999999999999999999999443 567889999998765443
No 9
>PRK09731 putative general secretion pathway protein YghD; Provisional
Probab=19.19 E-value=1.3e+02 Score=23.82 Aligned_cols=32 Identities=13% Similarity=0.308 Sum_probs=27.8
Q ss_pred ccchHHHHHHhHhhhcc------cCCceEEEEEEeeee
Q 035945 18 EQSMHQCLDLMENLYGD------KQGKQYRVWVDRVSS 49 (119)
Q Consensus 18 E~sLh~~Id~Lr~~yGd------KqGKkFRvWVDrV~~ 49 (119)
..||.+.|+.=.+.||- -+|...+||+|.+.-
T Consensus 99 ~~sL~~~V~~SA~~~gL~i~R~QP~Ge~vQVwld~v~F 136 (178)
T PRK09731 99 PAQVSRVISDSASAHSVVIKRIAERGENIQVWIEPVVF 136 (178)
T ss_pred CccHHHHHHHHHHHCCCeEEEecCCCCEEEEEECCCCH
Confidence 48999999999999996 489999999998753
No 10
>KOG2961 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=18.97 E-value=84 Score=25.62 Aligned_cols=28 Identities=14% Similarity=0.391 Sum_probs=23.1
Q ss_pred ccCCCCcEEccCCCccchHHHHHHhHhhhcccC
Q 035945 4 QNYSLGIIAHPSGTEQSMHQCLDLMENLYGDKQ 36 (119)
Q Consensus 4 ~~~p~gt~VHPsGvE~sLh~~Id~Lr~~yGdKq 36 (119)
+++|+..-|-| ++..+|+.+++.||.|.
T Consensus 54 it~P~~~~Iwp-----~~l~~ie~~~~vygek~ 81 (190)
T KOG2961|consen 54 ITAPYSLAIWP-----PLLPSIERCKAVYGEKD 81 (190)
T ss_pred eeCCcccccCc-----hhHHHHHHHHHHhCccc
Confidence 35777777776 78899999999999875
Done!