BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035950
(320 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 118/165 (71%), Gaps = 6/165 (3%)
Query: 130 EASLNERQKCVSFSEYQKHQQTPNTMTSHSKTRIRWTQHLHNRFVECVEFLGGAEKATPK 189
+ + N++Q+ VS SE Q + ++ + SK R+RWT LH FVE V LGG+E+ATPK
Sbjct: 202 DITANQQQQMVS-SEDQLSGRNSSSSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPK 260
Query: 190 GILKLMDIDGLTIFHVKSHLQKYRTARHIPE-----GKSKRERTTDLNAIVRLDSESGMQ 244
+LKL++ GLTI+HVKSHLQKYRTAR+ PE G+ + ++ T + I LD ++ ++
Sbjct: 261 AVLKLLNNPGLTIYHVKSHLQKYRTARYKPETSEVTGEPQEKKMTSIEDIKSLDMKTSVE 320
Query: 245 LVETLKLQLDVQKRLHDQLEVQRNLQLQIEEQGKQLTQMLDQQLK 289
+ + L+LQ++VQKRLH+QLE+QR+LQLQIE+QG+ L M ++Q K
Sbjct: 321 ITQALRLQMEVQKRLHEQLEIQRSLQLQIEKQGRYLQMMFEKQQK 365
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 120 bits (301), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 101/166 (60%), Gaps = 12/166 (7%)
Query: 126 PAEEEASLNERQKCVSFSEYQKHQQTPNTMTSHSKTRIRWTQHLHNRFVECVEFLGGAEK 185
P+ S R CV + +T+ K R+RWT LH RFV+ V LGG +K
Sbjct: 7 PSSMNGSYENRAMCV-------QGDSGLVLTTDPKPRLRWTVELHERFVDAVAQLGGPDK 59
Query: 186 ATPKGILKLMDIDGLTIFHVKSHLQKYRTAR--HIPEGK-SKRE--RTTDLNAIVRLDSE 240
ATPK I+++M + GLT++H+KSHLQK+R + H G S +E R + ++ + S
Sbjct: 60 ATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDHSTKEGSRASAMDIQRNVASS 119
Query: 241 SGMQLVETLKLQLDVQKRLHDQLEVQRNLQLQIEEQGKQLTQMLDQ 286
SGM ++Q++VQ+RLH+QLEVQR+LQL+IE QGK + +L++
Sbjct: 120 SGMMSRNMNEMQMEVQRRLHEQLEVQRHLQLRIEAQGKYMQSILER 165
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 42/55 (76%)
Query: 162 RIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTAR 216
R+RWT LH RFV VE LGG E+ATPK +L+LMD+ LT+ HVKSHLQ YRT +
Sbjct: 326 RMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 380
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 42/55 (76%)
Query: 162 RIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTAR 216
R+RWT LH RFV VE LGG E+ATPK +L+LMD+ LT+ HVKSHLQ YRT +
Sbjct: 221 RMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 275
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 42/55 (76%)
Query: 162 RIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTAR 216
R+RWT LH RFV VE LGG E+ATPK +L+LMD+ LT+ HVKSHLQ YRT +
Sbjct: 215 RMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 269
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 43/61 (70%)
Query: 162 RIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTARHIPEG 221
R+RWT LH FV V+ LGG KATPK +LK+MD+ GLTI HVKSHLQ YR +R G
Sbjct: 25 RLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSRITLLG 84
Query: 222 K 222
K
Sbjct: 85 K 85
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 78.6 bits (192), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 162 RIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTAR 216
R+RWT LH FV V+ LGG E+ATPK +L+LMD+ LT+ HVKSHLQ YRT +
Sbjct: 166 RMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQMYRTIK 220
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 43/60 (71%)
Query: 162 RIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTARHIPEG 221
R+RWT LH FV V+ LGG E+ATPK +L+LM++ LT+ HVKSHLQ YRT + +G
Sbjct: 107 RMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKCTDKG 166
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 156 TSHSKTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTA 215
T+ K R+ WT LHN+F+ V+ LG E+A PK IL LM++D LT +V SHLQK+R A
Sbjct: 179 TAQKKPRVLWTHELHNKFLAAVDHLG-VERAVPKKILDLMNVDKLTRENVASHLQKFRVA 237
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 160 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRT-ARHI 218
K R+ W+Q LH +FV V+ LG +KA PK IL LM I+GLT +V SHLQKYR + I
Sbjct: 194 KPRVVWSQELHQKFVSAVQQLG-LDKAVPKKILDLMSIEGLTRENVASHLQKYRLYLKKI 252
Query: 219 PEGK 222
EG+
Sbjct: 253 DEGQ 256
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 7/142 (4%)
Query: 160 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTARHIP 219
K R+ W+ LH +FV V LG EKA PK IL+LM++ GLT +V SHLQKYR
Sbjct: 237 KPRVVWSVELHQQFVAAVNQLG-VEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRL 295
Query: 220 EGKSKRERTTDLNAIVRLDSESGMQLVETLKLQLDVQK-RLHDQLEVQRNLQLQIEEQGK 278
G S+ + +LN ++ + TL D+Q + QL Q QLQ G+
Sbjct: 296 GGVSQHQ--GNLNNSFMTGQDASFGPLSTLN-GFDLQALAVTGQLPAQSLAQLQAAGLGR 352
Query: 279 QLTQMLDQQLKPNKSLVDSNNL 300
M+ + P S+VD ++
Sbjct: 353 --PAMVSKSGLPVSSIVDERSI 372
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 42/62 (67%), Gaps = 3/62 (4%)
Query: 157 SHSKTRIR--WTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRT 214
SH K +++ WT LH RFV+ VE LG +KA P IL+LM I+ LT ++ SHLQKYR+
Sbjct: 210 SHGKRKVKVDWTPELHRRFVQAVEQLG-IDKAVPSRILELMGIECLTRHNIASHLQKYRS 268
Query: 215 AR 216
R
Sbjct: 269 HR 270
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 160 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTAR 216
K ++ WT LH RFVE VE LG +KA P IL+LM + LT +V SHLQKYR+ R
Sbjct: 153 KVKVDWTPELHRRFVEAVEQLG-VDKAVPSRILELMGVHCLTRHNVASHLQKYRSHR 208
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 40/57 (70%), Gaps = 3/57 (5%)
Query: 160 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGI---LKLMDIDGLTIFHVKSHLQKYR 213
K R+ WT+ LH +F+E +E +GG EKA PK + L+ M I+G+T +V SHLQK+R
Sbjct: 215 KPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHR 271
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 163 IRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTAR 216
+ WT LH RFV+ VE LG +KA P IL++M ID LT ++ SHLQKYR+ R
Sbjct: 183 VDWTPELHRRFVQAVEQLG-IDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHR 235
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 160 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTAR 216
K ++ WT LH +FV+ VE LG +KA P IL++M++ LT +V SHLQKYR+ R
Sbjct: 147 KPKVDWTPELHRKFVQAVEQLG-VDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHR 202
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 156 TSHSKTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYR 213
+S K R+ W+ LH +FV V LG +KA PK IL++M++ GLT +V SHLQKYR
Sbjct: 212 SSLKKPRVVWSVELHQQFVAAVNQLG-VDKAVPKKILEMMNVPGLTRENVASHLQKYR 268
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 160 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLM----DIDGLTIFHVKSHLQKYR 213
K R++WT LH++F VE +G EKA PK ILK M ++ GLT +V SHLQKYR
Sbjct: 211 KPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEELNVQGLTRNNVASHLQKYR 268
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 49/85 (57%)
Query: 129 EEASLNERQKCVSFSEYQKHQQTPNTMTSHSKTRIRWTQHLHNRFVECVEFLGGAEKATP 188
E+ S +++K F + ++ + +S K R+ W+ LH++FV V +G KA P
Sbjct: 162 EDVSFGKKRKDFDFEKKLLQDESDPSSSSSKKARVVWSFELHHKFVNAVNQIGCDHKAGP 221
Query: 189 KGILKLMDIDGLTIFHVKSHLQKYR 213
K IL LM++ LT +V SHLQKYR
Sbjct: 222 KKILDLMNVPWLTRENVASHLQKYR 246
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 160 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYR 213
K R+ WT LH +FV V LG EKA PK IL LM+++ LT +V SHLQK+R
Sbjct: 195 KQRVVWTVELHKKFVAAVNQLG-YEKAMPKKILDLMNVEKLTRENVASHLQKFR 247
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 160 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYR 213
K+R+ W+ LH +FV V LG +KA PK IL+LM++ GL+ +V SHLQK+R
Sbjct: 200 KSRVVWSIELHQQFVNAVNKLG-IDKAVPKRILELMNVPGLSRENVASHLQKFR 252
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 55.1 bits (131), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 159 SKTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTAR 216
S+ ++ WT LH +FV+ VE LG ++A P IL+LM + LT +V SHLQK+R R
Sbjct: 295 SRKKVDWTPELHKKFVQAVEQLG-VDQAIPSRILELMKVGTLTRHNVASHLQKFRQHR 351
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 159 SKTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYR 213
K+R+ WT LH +F+ V LG +KA PK IL +M + LT V SHLQKYR
Sbjct: 197 GKSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 159 SKTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYR 213
K+R+ WT LH +F+ V LG +KA PK IL +M + LT V SHLQKYR
Sbjct: 197 GKSRLTWTTQLHRQFIAAVNHLG-EDKAVPKKILGIMKVKHLTREQVASHLQKYR 250
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 160 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYR 213
K +I+WT LH+ F++ + +G +KA PK IL M + LT +V SHLQKYR
Sbjct: 222 KKKIQWTDSLHDLFLQAIRHIG-LDKAVPKKILAFMSVPYLTRENVASHLQKYR 274
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 160 KTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYR 213
K +I WT L + F++ ++ +G +K PK IL +M++ LT +V SHLQKYR
Sbjct: 225 KKKIWWTNPLQDLFLQAIQHIG-YDKVVPKKILAIMNVPYLTRENVASHLQKYR 277
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 156 TSHSKTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQ 210
+S K R+ W + LH F+ V+FLG E+A PK IL +M +D ++ +V SHLQ
Sbjct: 219 SSAKKRRVVWDEELHQNFLNAVDFLG-LERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 165 WTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRT 214
W H +F+ + LG E PK IL++M+ LT V SHLQKY+
Sbjct: 227 WNSERHMKFIAAISILG-EEDFRPKSILEIMNDPNLTHRQVGSHLQKYKA 275
>sp|P92973|CCA1_ARATH Protein CCA1 OS=Arabidopsis thaliana GN=CCA1 PE=1 SV=1
Length = 608
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 9/61 (14%)
Query: 152 PNTMTSHSKTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQK 211
P T+T K R RWT+ HNRF+E + G A + + + T ++SH QK
Sbjct: 17 PYTIT---KQRERWTEEEHNRFIEALRLYGRAWQKIEEHVAT------KTAVQIRSHAQK 67
Query: 212 Y 212
+
Sbjct: 68 F 68
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 16/92 (17%)
Query: 142 FSEYQKHQQTPNTMTSHSKTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLT 201
F + K + P T+T K+R WT+ H++F+E + K +K + T
Sbjct: 44 FEDPTKKVRKPYTIT---KSRENWTEQEHDKFLEALHLFDRDWKK-----IKAF-VGSKT 94
Query: 202 IFHVKSHLQKY-------RTARHIPEGKSKRE 226
+ ++SH QKY T H+P + KR+
Sbjct: 95 VIQIRSHAQKYFLKVQKNGTKEHLPPPRPKRK 126
>sp|Q03YL0|GPDA_LEUMM Glycerol-3-phosphate dehydrogenase [NAD(P)+] OS=Leuconostoc
mesenteroides subsp. mesenteroides (strain ATCC 8293 /
NCDO 523) GN=gpsA PE=3 SV=1
Length = 336
Score = 32.7 bits (73), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 169 LHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQKYRTARHIPEGKSKRERT 228
L R + + LG A A P+ L L I L + + + + YR + + EGKS +E
Sbjct: 218 LLTRGLSEMRALGQAMGAQPETFLGLAGIGDLIVTGMSPNSRNYRAGKQLGEGKSLQEIQ 277
Query: 229 TDLNAIV 235
D+ ++
Sbjct: 278 DDMGMVI 284
>sp|Q6R0H1|LHY_ARATH Protein LHY OS=Arabidopsis thaliana GN=LHY PE=1 SV=2
Length = 645
Score = 32.3 bits (72), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Query: 152 PNTMTSHSKTRIRWTQHLHNRFVECVEFLGGAEKATPKGILKLMDIDGLTIFHVKSHLQK 211
P T+T K R RWT+ H RF+E + G A + + I T ++SH QK
Sbjct: 17 PYTIT---KQRERWTEDEHERFLEALRLYGRAWQRIEE------HIGTKTAVQIRSHAQK 67
Query: 212 YRT 214
+ T
Sbjct: 68 FFT 70
>sp|Q95JF2|GHR_AILME Growth hormone receptor OS=Ailuropoda melanoleuca GN=GHR PE=2 SV=1
Length = 638
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 11/56 (19%)
Query: 28 LSFHSQLPNVEGEGSFKLNPGSCNASGF-----------ICSSNFAMPNSVFYAAE 72
+ F++Q+ ++ GS L+PG N +G +C +NF M N+ F A+
Sbjct: 484 IDFYAQVSDITPAGSVVLSPGQKNKAGIAPCDMPPEVVSLCQANFIMDNAYFCEAD 539
>sp|Q9BZ29|DOCK9_HUMAN Dedicator of cytokinesis protein 9 OS=Homo sapiens GN=DOCK9 PE=1 SV=2
Length = 2069
Score = 32.0 bits (71), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 235 VRLDSESGMQLVETLKLQLDVQKRL--HDQLEVQRNLQLQIEEQGKQLTQMLDQQL 288
V+L E Q VE L V +RL DQLE Q ++ E K+L++++ +QL
Sbjct: 2013 VKLLKEVFRQFVEACGQALAVNERLIKEDQLEYQEEMKANYREMAKELSEIMHEQL 2068
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.128 0.362
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,975,994
Number of Sequences: 539616
Number of extensions: 4596074
Number of successful extensions: 14338
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 14182
Number of HSP's gapped (non-prelim): 215
length of query: 320
length of database: 191,569,459
effective HSP length: 117
effective length of query: 203
effective length of database: 128,434,387
effective search space: 26072180561
effective search space used: 26072180561
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)