Query         035952
Match_columns 125
No_of_seqs    108 out of 649
Neff          5.2 
Searched_HMMs 13730
Date          Mon Mar 25 13:16:34 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035952.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/035952hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1nn7a_ d.42.1.2 (A:) Potassiu  82.7    0.25 1.8E-05   32.1   1.7   71   50-124     2-78  (105)
  2 d3kvta_ d.42.1.2 (A:) akv3.1 v  76.4    0.51 3.7E-05   30.4   1.6   71   49-124     3-81  (103)
  3 d1t1da_ d.42.1.2 (A:) Shaker p  69.7     1.1 8.3E-05   28.6   2.1   71   50-124     3-81  (100)
  4 d2bkfa1 d.15.2.2 (A:1-85) Next  62.8      12 0.00089   23.3   6.1   53   50-104     7-68  (85)
  5 d1unda_ a.14.1.1 (A:) Advillin  53.3       2 0.00015   23.1   0.8   18   67-84      1-18  (36)
  6 d1z3xa2 a.261.1.1 (A:88-235) G  47.5     0.4 2.9E-05   33.5  -3.6   29   43-73    118-146 (148)
  7 d1y6ia2 a.261.1.1 (A:83-233) M  46.3    0.73 5.3E-05   32.2  -2.4   31   43-75    118-148 (151)
  8 d2ja9a2 d.51.1.1 (A:152-236) R  45.3      14  0.0011   22.6   4.2   50   76-125    23-80  (85)
  9 d2c0sa1 a.30.7.1 (A:1-57) Hypo  44.2     1.8 0.00013   25.7  -0.4   37   81-117    21-57  (57)
 10 d1j5ya1 a.4.5.1 (A:3-67) Putat  41.4      14   0.001   21.0   3.4   26   99-124     7-32  (65)
 11 d1r29a_ d.42.1.1 (A:) B-cell l  39.2      18  0.0013   22.4   4.1   61   58-121    34-97  (122)
 12 d1pzqa_ a.34.3.1 (A:) Erythron  34.8     9.6  0.0007   22.2   1.8   20    5-24     33-52  (60)
 13 d1vi7a2 d.58.11.2 (A:138-208)   31.5      39  0.0028   18.9   4.4   55   58-112     2-62  (71)
 14 d1yu5x1 a.14.1.1 (X:10-76) Vil  31.3     6.9  0.0005   23.6   0.8   19   66-84     31-49  (67)
 15 d8abpa_ c.93.1.1 (A:) L-arabin  30.2      47  0.0034   22.4   5.4   47   63-109     6-78  (305)
 16 d1p5dx3 c.84.1.1 (X:259-367) P  29.9      56  0.0041   20.0   5.3   53   70-124    50-109 (109)
 17 d2c9wc1 d.42.1.1 (C:17-112) El  29.4      36  0.0026   20.6   4.2   56   53-109     5-62  (96)
 18 d1buoa_ d.42.1.1 (A:) Promyelo  29.4      29  0.0021   21.6   3.8   63   50-122    31-96  (121)
 19 d1qusa_ d.2.1.6 (A:) 36 kDa so  28.4      16  0.0011   27.8   2.6   47   65-111    13-59  (322)
 20 d2r85a1 c.30.1.8 (A:1-99) 5-fo  26.2    0.72 5.3E-05   30.3  -4.9   25   41-65     63-88  (99)
 21 d1d8ja_ a.4.5.18 (A:) The cent  25.1      20  0.0015   22.2   2.3   16  109-124    26-41  (81)
 22 d1qzpa_ a.14.1.1 (A:) Dematin   25.0     7.1 0.00052   23.6  -0.0   19   66-84     32-50  (68)
 23 d1tjya_ c.93.1.1 (A:) AI-2 rec  24.3      35  0.0026   22.8   3.7   31   57-87      2-35  (316)
 24 d1wlza1 a.39.1.7 (A:229-311) D  24.2      31  0.0023   19.6   3.0   46   67-124    36-82  (83)
 25 d1zavu1 a.108.1.1 (U:1-30) Rib  24.1      25  0.0018   17.7   2.1   18   68-85     13-30  (30)
 26 d1tiza_ a.39.1.5 (A:) Calmodul  24.1      30  0.0022   19.0   2.8   45   67-123    17-62  (67)
 27 d1yu8x1 a.14.1.1 (X:42-76) Vil  24.0      11 0.00082   19.8   0.7   17   68-84      1-17  (35)
 28 d1ujsa_ a.14.1.1 (A:) Actin-bi  23.6      10 0.00074   24.0   0.6   20   66-85     46-65  (88)
 29 d1bl0a1 a.4.1.8 (A:9-62) MarA   23.1      48  0.0035   17.4   3.5   28   97-124     1-29  (54)
 30 d1ggwa_ a.39.1.5 (A:) Cdc4p {F  23.0      71  0.0052   19.4   4.9   30   95-124   108-137 (140)
 31 d1ip9a_ d.15.2.2 (A:) Bud emer  22.5      74  0.0054   18.8   5.2   46   52-101    17-71  (85)
 32 d2nzug1 c.93.1.1 (G:58-332) Gl  21.6   1E+02  0.0075   20.1   6.2   21   67-87     12-35  (275)
 33 d1xa6a1 a.116.1.1 (A:271-466)   20.0      43  0.0031   22.0   3.4   42   71-113    19-61  (196)

No 1  
>d1nn7a_ d.42.1.2 (A:) Potassium channel kv4.2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=82.72  E-value=0.25  Score=32.09  Aligned_cols=71  Identities=21%  Similarity=0.162  Sum_probs=45.9

Q ss_pred             EEEEEccCceeEEEeccCC-CcHHHHHHHHHHhh-hcCCCCCCceEecCCHHHHHHHHHHHHcCCC---C-CChHHHHHh
Q 035952           50 FAVYVGEEQERFVVPTGFL-SHPLFKMLLEKSYN-EFGFEQKDRLVVPCSVSTFQEIVSAVECSNK---R-FDFGNLVEE  123 (125)
Q Consensus        50 ~~VyVG~~~~RfvVp~~~L-~~P~F~~LL~~aee-EfG~~~~G~L~iPC~~~~F~~vl~~l~~~~~---~-~~~~~~~~~  123 (125)
                      +...||  +.+|.+..+-| ++|..  +|..... .+--+.+|.+-|-.+...|++||..++++.-   . ...+.+.+|
T Consensus         2 I~LNVG--G~~f~t~~~TL~~~p~s--~l~~~~~~~~~~~~~~~~FiDRdp~~F~~IL~ylR~G~l~~p~~~~~~~l~~E   77 (105)
T d1nn7a_           2 IVLNVS--GTRFQTWQDTLERYPDT--LLGSSERDFFYHPETQQYFFDRDPDIFRHILNFYRTGKLHYPRHECISAYDEE   77 (105)
T ss_dssp             EEEEET--TEEEEECHHHHHTSCSS--STTSGGGGGGEEGGGTEEEECSCTTTHHHHHHHHHHSCBCCCTTSCHHHHHHH
T ss_pred             EEEEEC--CEEEEEeHHHHhcCCCC--CccccccccCcCCCCCcEEEeCCHHHHHHHHHHHhcCccccCCCccHHHHHHH
Confidence            456787  78888886655 34421  1122222 2222346899999999999999999998762   1 356666665


Q ss_pred             h
Q 035952          124 L  124 (125)
Q Consensus       124 ~  124 (125)
                      +
T Consensus        78 a   78 (105)
T d1nn7a_          78 L   78 (105)
T ss_dssp             H
T ss_pred             H
Confidence            3


No 2  
>d3kvta_ d.42.1.2 (A:) akv3.1 voltage-gated potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=76.39  E-value=0.51  Score=30.36  Aligned_cols=71  Identities=15%  Similarity=0.128  Sum_probs=46.6

Q ss_pred             eEEEEEccCceeEEEeccCCCc-H--HHHHHHHHHhhhcCCC-CCCceEecCCHHHHHHHHHHHHcCCC----CCChHHH
Q 035952           49 FFAVYVGEEQERFVVPTGFLSH-P--LFKMLLEKSYNEFGFE-QKDRLVVPCSVSTFQEIVSAVECSNK----RFDFGNL  120 (125)
Q Consensus        49 ~~~VyVG~~~~RfvVp~~~L~~-P--~F~~LL~~aeeEfG~~-~~G~L~iPC~~~~F~~vl~~l~~~~~----~~~~~~~  120 (125)
                      .+.+-||  +++|.+..+-|.. |  .|..+.   +....+. .+|.+-|--+...|++||..++.+.-    ......+
T Consensus         3 rI~LNVG--G~~F~t~~~tL~~~~~s~l~~~~---~~~~~~~~~~~~~fiDRdp~~F~~IL~ylR~g~l~~p~~~~~~~l   77 (103)
T d3kvta_           3 RVIINVG--GIRHETYKATLKKIPATRLSRLT---EGMLNYDPVLNEYFFDRHPGVFAQIINYYRSGKLHYPTDVCGPLF   77 (103)
T ss_dssp             EEEEEET--TEEEEEEHHHHTTSCSSTTTTCC---TTSTTEETTTTEEEECSCTTTHHHHHHHHHHSCBCCCSSSCHHHH
T ss_pred             EEEEEEC--CEEEEEeHHHHhhCccchhHHHH---cCCCccCCCCCcEEecCCHHHHHHHHHHHccCCcccccccCHHHH
Confidence            4667788  5889988776652 3  222222   2222233 35889999999999999999998752    1345666


Q ss_pred             HHhh
Q 035952          121 VEEL  124 (125)
Q Consensus       121 ~~~~  124 (125)
                      .+|+
T Consensus        78 ~~Ea   81 (103)
T d3kvta_          78 EEEL   81 (103)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6654


No 3  
>d1t1da_ d.42.1.2 (A:) Shaker potassium channel {California sea hare (Aplysia californica) [TaxId: 6500]}
Probab=69.73  E-value=1.1  Score=28.59  Aligned_cols=71  Identities=14%  Similarity=0.189  Sum_probs=44.9

Q ss_pred             EEEEEccCceeEEEeccCCCc-H--HHHHHHHHHhhhcCCCCCCceEecCCHHHHHHHHHHHHcCC-C----CCChHHHH
Q 035952           50 FAVYVGEEQERFVVPTGFLSH-P--LFKMLLEKSYNEFGFEQKDRLVVPCSVSTFQEIVSAVECSN-K----RFDFGNLV  121 (125)
Q Consensus        50 ~~VyVG~~~~RfvVp~~~L~~-P--~F~~LL~~aeeEfG~~~~G~L~iPC~~~~F~~vl~~l~~~~-~----~~~~~~~~  121 (125)
                      +.+.||  +++|.++.+-|.. |  .+..|.....  +--+.+|.+-|--+...|++||..++++. .    ......+.
T Consensus         3 I~LNVG--G~~f~t~~~tL~~~p~s~l~~l~~~~~--~~~~~~g~~FiDRdp~~F~~IL~flR~~~~l~~~~~~~~~~l~   78 (100)
T d1t1da_           3 VVINVS--GLRFETQLKTLNQFPDTLLGNPQKRNR--YYDPLRNEYFFDRNRPSFDAILYFYQSGGRLRRPVNVPLDVFS   78 (100)
T ss_dssp             EEEEET--TEEEEEEHHHHHTSTTSTTTCHHHHGG--GEETTTTEEEECSCSTTHHHHHHHHHTTSCCCCCTTSCHHHHH
T ss_pred             EEEEEC--CEEEEEeHHHHhhCCCchhHHHHhCCC--cCCCCCCeEEEecCHHHHHHHHHHHhcCCCcCCCCcccHHHHH
Confidence            456787  7889888554432 3  3333332211  11234689999999999999999998743 1    12556666


Q ss_pred             Hhh
Q 035952          122 EEL  124 (125)
Q Consensus       122 ~~~  124 (125)
                      +|+
T Consensus        79 ~Ea   81 (100)
T d1t1da_          79 EEI   81 (100)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654


No 4  
>d2bkfa1 d.15.2.2 (A:1-85) Next to BRCA1 gene 1 protein, NBR1 (KIAA0049) {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.79  E-value=12  Score=23.30  Aligned_cols=53  Identities=9%  Similarity=0.153  Sum_probs=39.5

Q ss_pred             EEEEEccCceeEEEeccCCCcHHHHHHHHHHhhhcCCCC---------CCceEecCCHHHHHHH
Q 035952           50 FAVYVGEEQERFVVPTGFLSHPLFKMLLEKSYNEFGFEQ---------KDRLVVPCSVSTFQEI  104 (125)
Q Consensus        50 ~~VyVG~~~~RfvVp~~~L~~P~F~~LL~~aeeEfG~~~---------~G~L~iPC~~~~F~~v  104 (125)
                      +-|..|++..||.++..  +++.|.+|..+.+.-||.+.         +.-++|.|++++=|.+
T Consensus         7 vKvtf~~dt~RF~ls~~--~~~~~~~L~~~i~~rf~l~~~~lkY~Ddd~e~v~l~~d~dl~E~~   68 (85)
T d2bkfa1           7 LNVTFKNEIQSFLVSDP--ENTTWADIEAMVKVSFDLNTIQIKYLDEENEEVSINSQGEYEEAL   68 (85)
T ss_dssp             EEEEETTEEEEEEESCG--GGCCHHHHHHHHHHHHTCSSEEEEEECTTSCEEEECSHHHHHHHH
T ss_pred             EEEEECCceEEEEecCC--CCCcHHHHHHHHHHhcCcccceEEEEcCCCCEEEEecHHHHHHHH
Confidence            33445779999998533  46889999999999998652         2458899998876554


No 5  
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.30  E-value=2  Score=23.14  Aligned_cols=18  Identities=22%  Similarity=0.392  Sum_probs=16.5

Q ss_pred             CCCcHHHHHHHHHHhhhc
Q 035952           67 FLSHPLFKMLLEKSYNEF   84 (125)
Q Consensus        67 ~L~~P~F~~LL~~aeeEf   84 (125)
                      ||+.-.|++++.++.+||
T Consensus         1 yLsd~dF~~vFgmsr~eF   18 (36)
T d1unda_           1 YLSEQDFVSVFGITRGQF   18 (36)
T ss_dssp             CCCHHHHHHHHSSCHHHH
T ss_pred             CCCHHHHHHHHCcCHHHH
Confidence            799999999999999986


No 6  
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=47.48  E-value=0.4  Score=33.51  Aligned_cols=29  Identities=21%  Similarity=0.437  Sum_probs=19.1

Q ss_pred             CCCCCceEEEEEccCceeEEEeccCCCcHHH
Q 035952           43 ATTPTGFFAVYVGEEQERFVVPTGFLSHPLF   73 (125)
Q Consensus        43 ~~vpkG~~~VyVG~~~~RfvVp~~~L~~P~F   73 (125)
                      ..+|+||+|+.-  ..+-+.|--.+|+||.|
T Consensus       118 l~AP~GHLP~~~--~lrg~~~~~~~l~h~a~  146 (148)
T d1z3xa2         118 LSAPRGHLPLTN--QLRGVQVLNALLNHPAW  146 (148)
T ss_dssp             TTSCTTCCSCCC--CTTCSHHHHHHHTCGGG
T ss_pred             CCCCCCCCCcCC--ccchHHHHHHHhcCccc
Confidence            468999999754  23334444567788765


No 7  
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=46.26  E-value=0.73  Score=32.23  Aligned_cols=31  Identities=19%  Similarity=0.423  Sum_probs=19.6

Q ss_pred             CCCCCceEEEEEccCceeEEEeccCCCcHHHHH
Q 035952           43 ATTPTGFFAVYVGEEQERFVVPTGFLSHPLFKM   75 (125)
Q Consensus        43 ~~vpkG~~~VyVG~~~~RfvVp~~~L~~P~F~~   75 (125)
                      ..+|+||+|+.-.--+-|  +--..|+||.|.+
T Consensus       118 l~AP~GHLP~~~~lrG~~--~~~~l~~h~~~~~  148 (151)
T d1y6ia2         118 LSAPQGHLPLLNQLRGVR--VAESLYRHPVWSQ  148 (151)
T ss_dssp             TTSCTTCCSCCCCTTCTH--HHHHHHTSTHHHH
T ss_pred             CCCCCCCCCccchhhhHH--HHHHHHcCcchhh
Confidence            368999999864211111  3335889998864


No 8  
>d2ja9a2 d.51.1.1 (A:152-236) Ribosomal RNA-processing protein 40, RRP40 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=45.31  E-value=14  Score=22.65  Aligned_cols=50  Identities=18%  Similarity=0.226  Sum_probs=34.0

Q ss_pred             HHHHHhhhcCCC----CCCceEecCCH-HHHHH---HHHHHHcCCCCCChHHHHHhhC
Q 035952           76 LLEKSYNEFGFE----QKDRLVVPCSV-STFQE---IVSAVECSNKRFDFGNLVEELI  125 (125)
Q Consensus        76 LL~~aeeEfG~~----~~G~L~iPC~~-~~F~~---vl~~l~~~~~~~~~~~~~~~~~  125 (125)
                      +|+...++++|+    ++|.+-|-|+. ..=.-   .+..++...+...+.|++.+++
T Consensus        23 ml~~l~~~~~~eI~VG~NGrIWi~~~~~~~~i~i~~aI~~~e~~~~~~~~~~~vk~~l   80 (85)
T d2ja9a2          23 LLKVLAAHTKFEVAIGLNGKIWVKCEELSNTLACYRTIMECCQKNDTAAFKDIAKRQF   80 (85)
T ss_dssp             HHHHHHTTCCCEEEEETTTEEEEECSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHT
T ss_pred             HHHHHHhhcCceEEEecCcEEEEECCCHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHH
Confidence            677778888988    58999999964 33333   3344445556668888887653


No 9  
>d2c0sa1 a.30.7.1 (A:1-57) Hypothetical protein BAS4809, C-terminal domain {Bacillus anthracis [TaxId: 1392]}
Probab=44.20  E-value=1.8  Score=25.70  Aligned_cols=37  Identities=11%  Similarity=0.407  Sum_probs=25.5

Q ss_pred             hhhcCCCCCCceEecCCHHHHHHHHHHHHcCCCCCCh
Q 035952           81 YNEFGFEQKDRLVVPCSVSTFQEIVSAVECSNKRFDF  117 (125)
Q Consensus        81 eeEfG~~~~G~L~iPC~~~~F~~vl~~l~~~~~~~~~  117 (125)
                      .+.|||.|+-+|..+=+.+.....++.+.+.+.++|+
T Consensus        21 v~~YGf~h~kvl~~SQELD~LIN~~m~~k~~~k~~~~   57 (57)
T d2c0sa1          21 VEKYGFTHHKVISFSQELDRLLNLLIELKTKKKRYSL   57 (57)
T ss_dssp             HHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHCSSGGG
T ss_pred             HHHHCCCchHHHHHHHHHHHHHHHHHHHhccccccCC
Confidence            4579999976666665666666666777777666553


No 10 
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=41.37  E-value=14  Score=20.98  Aligned_cols=26  Identities=31%  Similarity=0.367  Sum_probs=20.8

Q ss_pred             HHHHHHHHHHHcCCCCCChHHHHHhh
Q 035952           99 STFQEIVSAVECSNKRFDFGNLVEEL  124 (125)
Q Consensus        99 ~~F~~vl~~l~~~~~~~~~~~~~~~~  124 (125)
                      +....|+..|.+.+...+.+||.++|
T Consensus         7 eR~~~Il~~L~~~~~~vs~~~La~~l   32 (65)
T d1j5ya1           7 ERLKSIVRILERSKEPVSGAQLAEEL   32 (65)
T ss_dssp             HHHHHHHHHHHHCSSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence            34567888888877777999999886


No 11 
>d1r29a_ d.42.1.1 (A:) B-cell lymphoma 6 (Bcl6) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.24  E-value=18  Score=22.36  Aligned_cols=61  Identities=16%  Similarity=0.222  Sum_probs=40.8

Q ss_pred             ceeEEEeccCC--CcHHHHHHHHHHhhhcCCCCCCceEec-CCHHHHHHHHHHHHcCCCCCChHHHH
Q 035952           58 QERFVVPTGFL--SHPLFKMLLEKSYNEFGFEQKDRLVVP-CSVSTFQEIVSAVECSNKRFDFGNLV  121 (125)
Q Consensus        58 ~~RfvVp~~~L--~~P~F~~LL~~aeeEfG~~~~G~L~iP-C~~~~F~~vl~~l~~~~~~~~~~~~~  121 (125)
                      .++|-+.-..|  ..|.|++++....+|   ...-.+.+| .+.+.|+.++..+-++.-..+.+++.
T Consensus        34 ~~~~~~Hk~vLa~~S~~F~~~f~~~~~e---~~~~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~   97 (122)
T d1r29a_          34 REQFRAHKTVLMACSGLFYSIFTDQLKR---NLSVINLDPEINPEGFNILLDFMYTSRLNLREGNIM   97 (122)
T ss_dssp             TEEEEECHHHHHHHCHHHHHHHTSTTTT---TCSEEECCTTSCHHHHHHHHHHHHHSCCCCCTTTHH
T ss_pred             CEEEEEehHHhhhCCHHHHHHhccchhh---hcceeeeecccCHHHHHHHHhhhcCCeecCchhhHH
Confidence            45677776666  459999998654333   111223334 88999999999999888666555443


No 12 
>d1pzqa_ a.34.3.1 (A:) Erythronolide synthase {Saccharopolyspora erythraea [TaxId: 1836]}
Probab=34.82  E-value=9.6  Score=22.24  Aligned_cols=20  Identities=5%  Similarity=0.018  Sum_probs=15.1

Q ss_pred             hHHHHHHHHHHhhhhcCCCC
Q 035952            5 KMASFKKLAKKVKVMSGGDK   24 (125)
Q Consensus         5 ~~~~l~ki~kkw~~~~~~~~   24 (125)
                      -..||..++|||++.-....
T Consensus        33 vg~rle~llrrw~srr~~~~   52 (60)
T d1pzqa_          33 VGQRLESLLRRWNSRRADAP   52 (60)
T ss_dssp             HHHHHHHHHHHHHHHHHCSC
T ss_pred             HHHHHHHHHHHHhccCCCCC
Confidence            35789999999997655443


No 13 
>d1vi7a2 d.58.11.2 (A:138-208) Hypothetical protein YigZ, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.53  E-value=39  Score=18.91  Aligned_cols=55  Identities=11%  Similarity=0.189  Sum_probs=36.0

Q ss_pred             ceeEEEeccCCCcHHHHHHHHHHh-----hhcCCCCCCceEec-CCHHHHHHHHHHHHcCC
Q 035952           58 QERFVVPTGFLSHPLFKMLLEKSY-----NEFGFEQKDRLVVP-CSVSTFQEIVSAVECSN  112 (125)
Q Consensus        58 ~~RfvVp~~~L~~P~F~~LL~~ae-----eEfG~~~~G~L~iP-C~~~~F~~vl~~l~~~~  112 (125)
                      ..+|.+.++|=....++.+|++..     .+||=.-.=.+.|| -.+..|..-+.-+.++.
T Consensus         2 ~t~~~l~~dY~~~~~v~~~L~~~~~~i~~~~y~~~V~l~v~vp~~~~~~f~~~l~d~t~G~   62 (71)
T d1vi7a2           2 LTEYTLQCEYHQLTGIEALLGQCDGKIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGS   62 (71)
T ss_dssp             CEEEEEEECTTTHHHHHHHHHHTTCEEEEEEESSSEEEEEEECSSTHHHHHHHHHHHHTTC
T ss_pred             ceEEEEEeccccHHHHHHHHHHCCCEEEeeeeccEEEEEEEECHHHHHHHHHHHHHhCCCc
Confidence            368899999999999999999873     45553321123444 35677777554444444


No 14 
>d1yu5x1 a.14.1.1 (X:10-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=31.29  E-value=6.9  Score=23.57  Aligned_cols=19  Identities=26%  Similarity=0.371  Sum_probs=17.8

Q ss_pred             cCCCcHHHHHHHHHHhhhc
Q 035952           66 GFLSHPLFKMLLEKSYNEF   84 (125)
Q Consensus        66 ~~L~~P~F~~LL~~aeeEf   84 (125)
                      .||++-.|++++.++.+||
T Consensus        31 ~yLsd~dF~~vFgms~~eF   49 (67)
T d1yu5x1          31 NHLSDEDFKAVFGMTRSAF   49 (67)
T ss_dssp             GGSCHHHHHHHHSSCHHHH
T ss_pred             hhCCHHHHHHHHCcCHHHH
Confidence            6999999999999999987


No 15 
>d8abpa_ c.93.1.1 (A:) L-arabinose-binding protein {Escherichia coli [TaxId: 562]}
Probab=30.20  E-value=47  Score=22.42  Aligned_cols=47  Identities=17%  Similarity=0.183  Sum_probs=30.1

Q ss_pred             EeccCCCcHHHHHHHHHHh---hhcCCC-----------------------CCCceEecCCHHHHHHHHHHHH
Q 035952           63 VPTGFLSHPLFKMLLEKSY---NEFGFE-----------------------QKDRLVVPCSVSTFQEIVSAVE  109 (125)
Q Consensus        63 Vp~~~L~~P~F~~LL~~ae---eEfG~~-----------------------~~G~L~iPC~~~~F~~vl~~l~  109 (125)
                      +=+..+++|.|..+++-++   ++.||.                       -+|.|..|.+...+..++..+.
T Consensus         6 ~v~~~~~~p~~~~~~~g~~~aa~~~G~~~i~~~~~d~~~q~~~i~~li~~~vDgiIi~~~~~~~~~~~~~~a~   78 (305)
T d8abpa_           6 FLVKQPEEPWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKAR   78 (305)
T ss_dssp             EEESCTTSHHHHHHHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHH
T ss_pred             EEeCCCCCHHHHHHHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHHHHcCCCEEEEccccccccHHHHHHHH
Confidence            4456889999999887554   577886                       1355555566655555555544


No 16 
>d1p5dx3 c.84.1.1 (X:259-367) Phosphomannomutase/phosphoglucomutase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=29.91  E-value=56  Score=19.97  Aligned_cols=53  Identities=9%  Similarity=0.149  Sum_probs=39.1

Q ss_pred             cHHHHHHHHHHhhhcCCCCCCceEec-----CCHH--HHHHHHHHHHcCCCCCChHHHHHhh
Q 035952           70 HPLFKMLLEKSYNEFGFEQKDRLVVP-----CSVS--TFQEIVSAVECSNKRFDFGNLVEEL  124 (125)
Q Consensus        70 ~P~F~~LL~~aeeEfG~~~~G~L~iP-----C~~~--~F~~vl~~l~~~~~~~~~~~~~~~~  124 (125)
                      |..+.+-+++..-.||.+..|.+.+|     |+-.  ..-.++.++.+.+.  +++||++++
T Consensus        50 ~~~v~~~m~~~~a~~GGE~SGh~~~~~~~~~~~Dgi~~al~~le~l~~~~~--~lsel~~~f  109 (109)
T d1p5dx3          50 HSLIKKKMKETGALLAGEMSGHVFFKERWFGFDDGIYSAARLLEILSQDQR--DSEHVFSAF  109 (109)
T ss_dssp             HHHHHHHHHHHCCSEEECTTSBEEETTTTCSSBCHHHHHHHHHHHHHTCSS--CHHHHHHTS
T ss_pred             hHHHHHHHhhcCCcEEecccceEEeccCCCCCChHHHHHHHHHHHHHHcCC--CHHHHHhcC
Confidence            88888888888889999998887664     6533  34466677776654  578888774


No 17 
>d2c9wc1 d.42.1.1 (C:17-112) Elongin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.40  E-value=36  Score=20.59  Aligned_cols=56  Identities=9%  Similarity=0.167  Sum_probs=36.0

Q ss_pred             EEccCceeEEEeccCCC-cHHHHHHHHHHhhhcCCCCCCceEec-CCHHHHHHHHHHHH
Q 035952           53 YVGEEQERFVVPTGFLS-HPLFKMLLEKSYNEFGFEQKDRLVVP-CSVSTFQEIVSAVE  109 (125)
Q Consensus        53 yVG~~~~RfvVp~~~L~-~P~F~~LL~~aeeEfG~~~~G~L~iP-C~~~~F~~vl~~l~  109 (125)
                      .+..++.+|.|+.+... .+.++.+|+... .++-..+++|.+| =+...++.|+..++
T Consensus         5 L~SsDg~~f~V~~~~A~~S~tI~~ml~~~~-~~~e~~~~~IpL~nV~s~iL~kViey~~   62 (96)
T d2c9wc1           5 LISSDGHEFIVKREHALTSGTIKAMLSGPG-QFAENETNEVNFREIPSHVLSKVCMYFT   62 (96)
T ss_dssp             EECTTCCEEEEEHHHHTTSHHHHHC-------------CEEECTTCCHHHHHHHHHHHH
T ss_pred             EEcCCCCEEEeeHHHHHHhHHHHHHHhccC-ccccCCCCeeECCCCCHHHHHHHHHHHH
Confidence            45678999999988775 568888886532 1122345788887 68899999988774


No 18 
>d1buoa_ d.42.1.1 (A:) Promyelocytic leukaemia zinc finger (PLZF) protein BTB domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.39  E-value=29  Score=21.60  Aligned_cols=63  Identities=17%  Similarity=0.310  Sum_probs=42.1

Q ss_pred             EEEEEccCceeEEEeccCC--CcHHHHHHHHHHhhhcCCCCCCceEec-CCHHHHHHHHHHHHcCCCCCChHHHHH
Q 035952           50 FAVYVGEEQERFVVPTGFL--SHPLFKMLLEKSYNEFGFEQKDRLVVP-CSVSTFQEIVSAVECSNKRFDFGNLVE  122 (125)
Q Consensus        50 ~~VyVG~~~~RfvVp~~~L--~~P~F~~LL~~aeeEfG~~~~G~L~iP-C~~~~F~~vl~~l~~~~~~~~~~~~~~  122 (125)
                      +.+.||  .++|-+.--.|  ..|.|+++++..        ...+.+| -+...|+.++..+-++.-.++.+++.+
T Consensus        31 v~l~v~--~~~~~aHk~vLaa~S~~F~~lf~~~--------~~~i~~~~v~~~~f~~ll~~~Ytg~i~l~~~~v~~   96 (121)
T d1buoa_          31 VVIMVD--SQEFHAHRTVLACTSKMFEILFHRN--------SQHYTLDFLSPKTFQQILEYAYTATLQAKAEDLDD   96 (121)
T ss_dssp             EEEEES--SCEEEECHHHHHHHCHHHHHHTTSC--------CSEEEECSSCHHHHHHHHHHHHHSCCCCCGGGHHH
T ss_pred             EEEEEC--CEEEEEEHHHhcccChhhhhhccCc--------cceeecCCCCHHHHHHHHHheEccccCCcHHHHHH
Confidence            344455  34566653333  468899988532        2357777 678899999999998887776666543


No 19 
>d1qusa_ d.2.1.6 (A:) 36 kDa soluble lytic transglycosylase, SLT35 {Escherichia coli [TaxId: 562]}
Probab=28.45  E-value=16  Score=27.76  Aligned_cols=47  Identities=13%  Similarity=0.340  Sum_probs=31.7

Q ss_pred             ccCCCcHHHHHHHHHHhhhcCCCCCCceEecCCHHHHHHHHHHHHcC
Q 035952           65 TGFLSHPLFKMLLEKSYNEFGFEQKDRLVVPCSVSTFQEIVSAVECS  111 (125)
Q Consensus        65 ~~~L~~P~F~~LL~~aeeEfG~~~~G~L~iPC~~~~F~~vl~~l~~~  111 (125)
                      -+|.+||.++++++...+++||+.+=...+==++.....++..+++.
T Consensus        13 ~dya~~p~v~~Fi~~la~~~G~s~~~l~~~f~~~k~~~~vi~~~~~q   59 (322)
T d1qusa_          13 GDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQ   59 (322)
T ss_dssp             STTTTCHHHHHHHHHHHHHHCCCHHHHHHHHTTCCCCHHHHHHHHCC
T ss_pred             CCcccCHHHHHHHHHHHHHhCCCHHHHHHHHHhCcccHHHHHHHhcc
Confidence            37999999999999999999999631111111344445666666554


No 20 
>d2r85a1 c.30.1.8 (A:1-99) 5-formaminoimidazole-4-carboxamide ribonucleotide synthetase PurP {Pyrococcus furiosus [TaxId: 2261]}
Probab=26.23  E-value=0.72  Score=30.32  Aligned_cols=25  Identities=36%  Similarity=0.531  Sum_probs=18.7

Q ss_pred             cCCCCCCceEEEEEccCc-eeEEEec
Q 035952           41 SMATTPTGFFAVYVGEEQ-ERFVVPT   65 (125)
Q Consensus        41 ~~~~vpkG~~~VyVG~~~-~RfvVp~   65 (125)
                      .+.-+|.|.|++|+|-+. +.|.||+
T Consensus        63 N~I~IPhgSfv~Y~G~d~ie~~~VP~   88 (99)
T d2r85a1          63 NAVVVPTGSFVAHLGIELVENMKVPY   88 (99)
T ss_dssp             TEEECCCTTHHHHHCHHHHHTCCSCB
T ss_pred             CEEEecCCCEEEEEcHHHHhcCCCCc
Confidence            466899999999999532 3477773


No 21 
>d1d8ja_ a.4.5.18 (A:) The central core domain of TFIIE beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.12  E-value=20  Score=22.19  Aligned_cols=16  Identities=6%  Similarity=0.287  Sum_probs=12.3

Q ss_pred             HcCCCCCChHHHHHhh
Q 035952          109 ECSNKRFDFGNLVEEL  124 (125)
Q Consensus       109 ~~~~~~~~~~~~~~~~  124 (125)
                      +.+++.++|||++||.
T Consensus        26 ~g~~hPLtLeEiLDEt   41 (81)
T d1d8ja_          26 RGDTHPLTLDEILDET   41 (81)
T ss_dssp             HTCCSCBCHHHHHHHH
T ss_pred             cCCCCCccHHHHHHHH
Confidence            3455667999999985


No 22 
>d1qzpa_ a.14.1.1 (A:) Dematin {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.99  E-value=7.1  Score=23.60  Aligned_cols=19  Identities=32%  Similarity=0.321  Sum_probs=17.7

Q ss_pred             cCCCcHHHHHHHHHHhhhc
Q 035952           66 GFLSHPLFKMLLEKSYNEF   84 (125)
Q Consensus        66 ~~L~~P~F~~LL~~aeeEf   84 (125)
                      .||++-.|++++.++.+||
T Consensus        32 ~yLsd~dF~~vFgms~~eF   50 (68)
T d1qzpa_          32 RHLSAEDFSRVFAMSPEEF   50 (68)
T ss_dssp             GGBCHHHHHHHSSSCHHHH
T ss_pred             hhCCHHHHHHHHCcCHHHH
Confidence            6999999999999999987


No 23 
>d1tjya_ c.93.1.1 (A:) AI-2 receptor LsrB {Salmonella typhi [TaxId: 90370]}
Probab=24.34  E-value=35  Score=22.78  Aligned_cols=31  Identities=13%  Similarity=0.168  Sum_probs=22.6

Q ss_pred             CceeEEEeccCCCcHHHHHHHHHH---hhhcCCC
Q 035952           57 EQERFVVPTGFLSHPLFKMLLEKS---YNEFGFE   87 (125)
Q Consensus        57 ~~~RfvVp~~~L~~P~F~~LL~~a---eeEfG~~   87 (125)
                      ..+|..+=+..++||.|+...+-+   ++++||.
T Consensus         2 ~~~kI~~i~~~~~npf~~~~~~g~~~~a~~~G~~   35 (316)
T d1tjya_           2 SAERIAFIPKLVGVGFFTSGGNGAQEAGKALGID   35 (316)
T ss_dssp             CCCEEEEECSSSSSHHHHHHHHHHHHHHHHHTCE
T ss_pred             CCCEEEEEeCCCCCHHHHHHHHHHHHHHHHcCCE
Confidence            345666667889999999886555   5678875


No 24 
>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.23  E-value=31  Score=19.59  Aligned_cols=46  Identities=9%  Similarity=0.237  Sum_probs=36.1

Q ss_pred             CCCcHHHHHHHHHHhhhcCCCCCCceEecCCHHHHHHHHHHHH-cCCCCCChHHHHHhh
Q 035952           67 FLSHPLFKMLLEKSYNEFGFEQKDRLVVPCSVSTFQEIVSAVE-CSNKRFDFGNLVEEL  124 (125)
Q Consensus        67 ~L~~P~F~~LL~~aeeEfG~~~~G~L~iPC~~~~F~~vl~~l~-~~~~~~~~~~~~~~~  124 (125)
                      +++...|+.+|...    |        +|.+...|++++..++ +++|..+..|.+.-|
T Consensus        36 ~i~~~ef~~~l~~~----~--------~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          36 TISREEFRAICNRR----V--------QILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             CBCHHHHHHHHHHH----T--------CCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             eEChhHHHHHHHHh----C--------CCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            66678888888753    2        4678999999999996 666788999988755


No 25 
>d1zavu1 a.108.1.1 (U:1-30) Ribosomal protein L7/12, oligomerisation (N-terminal) domain {Thermotoga maritima [TaxId: 2336]}
Probab=24.14  E-value=25  Score=17.68  Aligned_cols=18  Identities=28%  Similarity=0.429  Sum_probs=14.4

Q ss_pred             CCcHHHHHHHHHHhhhcC
Q 035952           68 LSHPLFKMLLEKSYNEFG   85 (125)
Q Consensus        68 L~~P~F~~LL~~aeeEfG   85 (125)
                      |.-....+|.++.|+.||
T Consensus        13 ltvaelaelvk~ledkfg   30 (30)
T d1zavu1          13 LTVSELAELVKKLEDKFG   30 (30)
T ss_dssp             SBHHHHHHHHHHHHHHTC
T ss_pred             hhHHHHHHHHHHHHhhcC
Confidence            445667889999999987


No 26 
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.06  E-value=30  Score=18.99  Aligned_cols=45  Identities=9%  Similarity=0.039  Sum_probs=32.4

Q ss_pred             CCCcHHHHHHHHHHhhhcCCCCCCceEecCCHHHHHHHHHHHH-cCCCCCChHHHHHh
Q 035952           67 FLSHPLFKMLLEKSYNEFGFEQKDRLVVPCSVSTFQEIVSAVE-CSNKRFDFGNLVEE  123 (125)
Q Consensus        67 ~L~~P~F~~LL~~aeeEfG~~~~G~L~iPC~~~~F~~vl~~l~-~~~~~~~~~~~~~~  123 (125)
                      +++...|+.+++..    |        ++++....+.++..++ ++++..+.+|.+.-
T Consensus        17 ~I~~~El~~~l~~l----g--------~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~   62 (67)
T d1tiza_          17 KLSLDEFREVALAF----S--------PYFTQEDIVKFFEEIDVDGNGELNADEFTSC   62 (67)
T ss_dssp             CEEHHHHHHHHHHT----C--------TTSCHHHHHHHHHHHCCSSSSEECHHHHHHH
T ss_pred             cCcHHHHHHHHHHh----c--------cccchHHHHHHHHHhCCCCCCeEeHHHHHHH
Confidence            45566777777653    2        4577888899988885 56678899988754


No 27 
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=24.02  E-value=11  Score=19.82  Aligned_cols=17  Identities=29%  Similarity=0.409  Sum_probs=14.0

Q ss_pred             CCcHHHHHHHHHHhhhc
Q 035952           68 LSHPLFKMLLEKSYNEF   84 (125)
Q Consensus        68 L~~P~F~~LL~~aeeEf   84 (125)
                      |+.-.|++++.++.+||
T Consensus         1 Lsd~dF~~vfgmsr~eF   17 (35)
T d1yu8x1           1 LSDEDFKAVFGMTRSAF   17 (35)
T ss_dssp             SCHHHHHHHHSSCHHHH
T ss_pred             CCHHHHHHHHCCCHHHH
Confidence            56778999999988886


No 28 
>d1ujsa_ a.14.1.1 (A:) Actin-binding LIM protein homologue KIAA0843 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.62  E-value=10  Score=23.98  Aligned_cols=20  Identities=25%  Similarity=0.349  Sum_probs=18.4

Q ss_pred             cCCCcHHHHHHHHHHhhhcC
Q 035952           66 GFLSHPLFKMLLEKSYNEFG   85 (125)
Q Consensus        66 ~~L~~P~F~~LL~~aeeEfG   85 (125)
                      .||++-.|++++.++.+||-
T Consensus        46 ~YLSdedF~~vFgMsr~eF~   65 (88)
T d1ujsa_          46 RHLSQEEFYQVFGMTISEFD   65 (88)
T ss_dssp             GGSCTTHHHHHHSSCHHHHT
T ss_pred             hcCCHHHHHHHHCcCHHHHH
Confidence            69999999999999999974


No 29 
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=23.15  E-value=48  Score=17.41  Aligned_cols=28  Identities=14%  Similarity=0.184  Sum_probs=20.6

Q ss_pred             CHHHHHHHHHHHHcCCC-CCChHHHHHhh
Q 035952           97 SVSTFQEIVSAVECSNK-RFDFGNLVEEL  124 (125)
Q Consensus        97 ~~~~F~~vl~~l~~~~~-~~~~~~~~~~~  124 (125)
                      |...++.++..|+..-. .++++||.+.+
T Consensus         1 D~~~i~~v~~yI~~~~~~~~tl~~lA~~~   29 (54)
T d1bl0a1           1 DAITIHSILDWIEDNLESPLSLEKVSERS   29 (54)
T ss_dssp             CHHHHHHHHHHHHTTTTSCCCCHHHHHHS
T ss_pred             CHHHHHHHHHHHHhccCCCCCHHHHHHHH
Confidence            45667888888875554 46999998764


No 30 
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=23.04  E-value=71  Score=19.44  Aligned_cols=30  Identities=13%  Similarity=0.310  Sum_probs=24.2

Q ss_pred             cCCHHHHHHHHHHHHcCCCCCChHHHHHhh
Q 035952           95 PCSVSTFQEIVSAVECSNKRFDFGNLVEEL  124 (125)
Q Consensus        95 PC~~~~F~~vl~~l~~~~~~~~~~~~~~~~  124 (125)
                      |.+...++.++..+..++|+.+.+|.++-+
T Consensus       108 ~lt~~e~~~l~~~~d~~dG~I~y~eF~~~m  137 (140)
T d1ggwa_         108 KLSNEEMDELLKGVPVKDGMVNYHDFVQMI  137 (140)
T ss_dssp             CSCHHHHHHHHHHTTCSSCCSTTTHHHHHH
T ss_pred             CCCHHHHHHHHHhhCCCCCEEeHHHHHHHH
Confidence            567788888888888778889999887653


No 31 
>d1ip9a_ d.15.2.2 (A:) Bud emergence mediator Bemp1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=22.49  E-value=74  Score=18.78  Aligned_cols=46  Identities=9%  Similarity=0.081  Sum_probs=33.5

Q ss_pred             EEEccCceeEEEeccCCCcHHHHHHHHHHhhhcCCCC--------C-CceEecCCHHHH
Q 035952           52 VYVGEEQERFVVPTGFLSHPLFKMLLEKSYNEFGFEQ--------K-DRLVVPCSVSTF  101 (125)
Q Consensus        52 VyVG~~~~RfvVp~~~L~~P~F~~LL~~aeeEfG~~~--------~-G~L~iPC~~~~F  101 (125)
                      |+.+++..||.||.+    ..|.+|.++.++-|+-..        + ..++|-|+.++=
T Consensus        17 v~~~~D~~~~~l~~~----it~~dL~~kI~~rf~~~~~~lkY~Dedgd~v~i~sD~Dl~   71 (85)
T d1ip9a_          17 FYYKDDIFALMLKGD----TTYKELRSKIAPRIDTDNFKLQTKLFDGSGEEIKTDSQVS   71 (85)
T ss_dssp             ECBTTCCEEEEECSC----CCHHHHHHHHHHHHTSSCEEEEECCSSSCCSCCCSHHHHH
T ss_pred             EEECCcEEEEEeCCC----CCHHHHHHHHHHHhCCCceEEEEEcCCCCEEEEeCHHHHH
Confidence            344789999999854    448999999998887431        2 346788887763


No 32 
>d2nzug1 c.93.1.1 (G:58-332) Glucose-resistance amylase regulator CcpA, C-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=21.59  E-value=1e+02  Score=20.09  Aligned_cols=21  Identities=10%  Similarity=0.186  Sum_probs=16.1

Q ss_pred             CCCcHHHHHHHHHHhh---hcCCC
Q 035952           67 FLSHPLFKMLLEKSYN---EFGFE   87 (125)
Q Consensus        67 ~L~~P~F~~LL~~aee---EfG~~   87 (125)
                      .+++|.|.++++-.++   +.||.
T Consensus        12 ~l~~~f~~~~~~gi~~~~~~~g~~   35 (275)
T d2nzug1          12 DISNIFYAELARGIEDIATMYKYN   35 (275)
T ss_dssp             CTTSHHHHHHHHHHHHHHHHTTCE
T ss_pred             CCCCHHHHHHHHHHHHHHHHcCCE
Confidence            5889999988877654   66776


No 33 
>d1xa6a1 a.116.1.1 (A:271-466) Beta-chimaerin, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.02  E-value=43  Score=21.97  Aligned_cols=42  Identities=10%  Similarity=0.230  Sum_probs=32.7

Q ss_pred             HHH-HHHHHHHhhhcCCCCCCceEecCCHHHHHHHHHHHHcCCC
Q 035952           71 PLF-KMLLEKSYNEFGFEQKDRLVVPCSVSTFQEIVSAVECSNK  113 (125)
Q Consensus        71 P~F-~~LL~~aeeEfG~~~~G~L~iPC~~~~F~~vl~~l~~~~~  113 (125)
                      |.+ ..+++.. ++.|...+|.-++|.+...-+.+...+++++.
T Consensus        19 P~iv~~~i~~l-~~~gl~~eGiFR~~g~~~~v~~l~~~~~~~~~   61 (196)
T d1xa6a1          19 PMVVDICIREI-EARGLKSEGLYRVSGFTEHIEDVKMAFDRDGE   61 (196)
T ss_dssp             CHHHHHHHHHH-HHSCSSSTTTTTSCCCHHHHHHHHHHHSSTTT
T ss_pred             ChHHHHHHHHH-HHhCCCCCCeeeeCCCHHHHHHHHHHHhcCCC
Confidence            554 4455554 56899999999999999999999999877543


Done!