Your job contains 1 sequence.
>035953
MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL
LRWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKFSKLYAKDFFVYGN
YSTRSLPHALYVLPHNTQLSLSPPLNPAAVGHSRSPPFKSKIYGCIIA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 035953
(168 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2033723 - symbol:ESP3 "ENHANCED SILENCING PHEN... 399 5.8e-36 1
TAIR|locus:2062492 - symbol:MEE29 "maternal effect embryo... 380 6.3e-34 1
ZFIN|ZDB-GENE-030131-8589 - symbol:dhx16 "DEAH (Asp-Glu-A... 326 3.9e-28 1
UNIPROTKB|Q5JP46 - symbol:DHX16 "Putative pre-mRNA-splici... 299 7.0e-26 1
UNIPROTKB|Q5SQH5 - symbol:DHX16 "Putative pre-mRNA-splici... 299 7.0e-26 1
UNIPROTKB|O60231 - symbol:DHX16 "Putative pre-mRNA-splici... 299 2.9e-25 1
UNIPROTKB|F1PGL2 - symbol:DHX16 "Uncharacterized protein"... 299 2.9e-25 1
UNIPROTKB|E1BF68 - symbol:DHX16 "Uncharacterized protein"... 299 2.9e-25 1
UNIPROTKB|F1RU83 - symbol:DHX16 "Putative pre-mRNA-splici... 299 2.9e-25 1
UNIPROTKB|Q767K6 - symbol:DHX16 "Putative pre-mRNA-splici... 299 2.9e-25 1
RGD|1302963 - symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box po... 298 3.7e-25 1
DICTYBASE|DDB_G0285937 - symbol:dhx16 "putative RNA splic... 288 4.8e-24 1
WB|WBGene00003392 - symbol:mog-4 species:6239 "Caenorhabd... 274 1.3e-22 1
UNIPROTKB|O45244 - symbol:mog-4 "Probable pre-mRNA-splici... 274 1.3e-22 1
FB|FBgn0086444 - symbol:l(2)37Cb "lethal (2) 37Cb" specie... 271 2.2e-22 1
ASPGD|ASPL0000006947 - symbol:AN5827 species:162425 "Emer... 238 1.1e-18 1
POMBASE|SPBC19C2.01 - symbol:cdc28 "ATP-dependent RNA hel... 234 2.6e-18 1
UNIPROTKB|G4N1N4 - symbol:MGG_07501 "ATP-dependent RNA he... 232 4.0e-18 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 214 3.3e-16 1
WB|WBGene00003393 - symbol:mog-5 species:6239 "Caenorhabd... 207 2.4e-15 1
UNIPROTKB|Q09530 - symbol:mog-5 "Probable pre-mRNA-splici... 207 2.4e-15 1
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 192 9.4e-14 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 191 1.2e-13 1
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 191 1.2e-13 1
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 191 1.2e-13 1
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 191 1.2e-13 1
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 191 1.2e-13 1
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 191 1.2e-13 1
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 191 1.3e-13 1
MGI|MGI:1306823 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box... 191 1.3e-13 1
FB|FBgn0086895 - symbol:pea "peanuts" species:7227 "Droso... 189 2.0e-13 1
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 188 2.4e-13 1
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 188 2.5e-13 1
SGD|S000000815 - symbol:PRP22 "DEAH-box RNA-dependent ATP... 186 3.8e-13 1
ASPGD|ASPL0000070923 - symbol:AN4721 species:162425 "Emer... 185 5.5e-13 1
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 180 1.7e-12 1
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 176 4.6e-12 1
POMBASE|SPBC1711.17 - symbol:prp16 "ATP-dependent RNA hel... 175 5.9e-12 1
UNIPROTKB|G4MTU4 - symbol:MGG_11351 "Pre-mRNA-splicing fa... 165 5.6e-11 1
ASPGD|ASPL0000014477 - symbol:AN4032 species:162425 "Emer... 163 8.3e-11 1
SGD|S000001794 - symbol:PRP16 "DEAH-box RNA helicase invo... 162 1.3e-10 1
DICTYBASE|DDB_G0285213 - symbol:dhx15 "putative RNA splic... 157 2.6e-10 1
GENEDB_PFALCIPARUM|PF10_0294 - symbol:PF10_0294 "RNA heli... 155 9.0e-10 1
UNIPROTKB|Q8IJA4 - symbol:PF10_0294 "RNA helicase, putati... 155 9.0e-10 1
CGD|CAL0002409 - symbol:orf19.5865 species:5476 "Candida ... 151 1.5e-09 1
TAIR|locus:2065210 - symbol:AT2G47250 species:3702 "Arabi... 150 1.5e-09 1
DICTYBASE|DDB_G0285843 - symbol:helD "putative RNA splici... 152 2.0e-09 1
FB|FBgn0026713 - symbol:l(1)G0007 "lethal (1) G0007" spec... 151 2.2e-09 1
TAIR|locus:2095989 - symbol:AT3G62310 species:3702 "Arabi... 148 2.4e-09 1
TAIR|locus:2147785 - symbol:AT5G14900 species:3702 "Arabi... 141 2.8e-09 1
ZFIN|ZDB-GENE-040426-1144 - symbol:dhx38 "DEAH (Asp-Glu-A... 149 3.8e-09 1
WB|WBGene00003389 - symbol:mog-1 species:6239 "Caenorhabd... 147 5.5e-09 1
UNIPROTKB|P34498 - symbol:mog-1 "Probable pre-mRNA-splici... 147 5.5e-09 1
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 144 5.8e-09 1
UNIPROTKB|Q9H5Z1 - symbol:DHX35 "Probable ATP-dependent R... 144 6.2e-09 1
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 146 7.3e-09 1
DICTYBASE|DDB_G0270110 - symbol:dhx33 "DEAD/DEAH box heli... 142 1.1e-08 1
FB|FBgn0033160 - symbol:CG11107 species:7227 "Drosophila ... 141 1.4e-08 1
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 140 1.7e-08 1
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 140 1.7e-08 1
TAIR|locus:2197965 - symbol:AT1G26370 species:3702 "Arabi... 98 2.8e-08 2
RGD|1307239 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box po... 135 3.2e-08 1
UNIPROTKB|B4DVG8 - symbol:DHX38 "Uncharacterized protein"... 135 3.9e-08 1
UNIPROTKB|E2RQN7 - symbol:DHX35 "Uncharacterized protein"... 136 4.4e-08 1
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 136 4.6e-08 1
UNIPROTKB|F1MWZ4 - symbol:F1MWZ4 "Uncharacterized protein... 135 5.8e-08 1
UNIPROTKB|F1S3A8 - symbol:DHX38 "Uncharacterized protein"... 135 6.4e-08 1
GENEDB_PFALCIPARUM|MAL13P1.322 - symbol:MAL13P1.322 "spli... 137 6.5e-08 1
UNIPROTKB|C0H5K5 - symbol:MAL13P1.322 "Splicing factor, p... 137 6.5e-08 1
UNIPROTKB|E1C094 - symbol:E1C094 "Uncharacterized protein... 137 6.6e-08 1
UNIPROTKB|F1NY80 - symbol:F1NY80 "Uncharacterized protein... 137 6.6e-08 1
MGI|MGI:2445102 - symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) bo... 134 7.2e-08 1
UNIPROTKB|F1PRA1 - symbol:DHX33 "Uncharacterized protein"... 133 7.8e-08 1
UNIPROTKB|F1NHI3 - symbol:DHX15 "Uncharacterized protein"... 134 8.1e-08 1
UNIPROTKB|A5D7D9 - symbol:DHX15 "Uncharacterized protein"... 134 8.6e-08 1
UNIPROTKB|E2R2U3 - symbol:DHX15 "Uncharacterized protein"... 134 8.6e-08 1
UNIPROTKB|O43143 - symbol:DHX15 "Putative pre-mRNA-splici... 134 8.6e-08 1
UNIPROTKB|F1S5A8 - symbol:DHX15 "Uncharacterized protein"... 134 8.6e-08 1
MGI|MGI:1099786 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) bo... 134 8.6e-08 1
RGD|1308072 - symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box po... 134 8.6e-08 1
ZFIN|ZDB-GENE-070410-11 - symbol:zgc:158828 "zgc:158828" ... 133 9.1e-08 1
UNIPROTKB|E2RC56 - symbol:DHX38 "Uncharacterized protein"... 135 1.1e-07 1
UNIPROTKB|Q92620 - symbol:DHX38 "Pre-mRNA-splicing factor... 135 1.1e-07 1
RGD|1310345 - symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box po... 135 1.1e-07 1
GENEDB_PFALCIPARUM|PFL1525c - symbol:PFL1525c "pre-mRNA s... 134 1.4e-07 1
UNIPROTKB|Q8I5A4 - symbol:PFL1525c "Pre-mRNA splicing fac... 134 1.4e-07 1
UNIPROTKB|G4MKC3 - symbol:MGG_02518 "ATP-dependent RNA he... 131 1.4e-07 1
UNIPROTKB|E1BYA5 - symbol:DHX33 "Uncharacterized protein"... 130 1.8e-07 1
UNIPROTKB|E1C4U5 - symbol:DHX35 "Uncharacterized protein"... 130 2.0e-07 1
WB|WBGene00018967 - symbol:F56D2.6 species:6239 "Caenorha... 130 2.1e-07 1
UNIPROTKB|Q20875 - symbol:F56D2.6 "Putative pre-mRNA-spli... 130 2.1e-07 1
UNIPROTKB|Q5THR1 - symbol:DHX35 "Probable ATP-dependent R... 129 2.4e-07 1
UNIPROTKB|Q05BE5 - symbol:DHX33 "DEAH (Asp-Glu-Ala-His) b... 127 2.4e-07 1
UNIPROTKB|F1MVJ1 - symbol:DHX38 "Pre-mRNA-splicing factor... 131 3.0e-07 1
UNIPROTKB|Q17R09 - symbol:DHX38 "Pre-mRNA-splicing factor... 131 3.0e-07 1
WB|WBGene00022056 - symbol:Y67D2.6 species:6239 "Caenorha... 128 3.4e-07 1
UNIPROTKB|I3L1L6 - symbol:DHX33 "Putative ATP-dependent R... 127 3.4e-07 1
SGD|S000003088 - symbol:PRP43 "RNA helicase in the DEAH-b... 128 3.6e-07 1
CGD|CAL0005059 - symbol:orf19.2818 species:5476 "Candida ... 100 3.8e-07 2
UNIPROTKB|Q9H6R0 - symbol:DHX33 "Putative ATP-dependent R... 127 4.1e-07 1
WARNING: Descriptions of 8 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 399 (145.5 bits), Expect = 5.8e-36, P = 5.8e-36
Identities = 90/153 (58%), Positives = 106/153 (69%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+ SDKYKC EII IAAMLSIG SIFYR KDKQ+HADNARMNFH G+VGDHI L
Sbjct: 827 MLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNVGDHIAL 886
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L+ WC ENYIQV+SMKRARDI+DQLEGLL RVEI+++ NLN+LD+++
Sbjct: 887 LKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVR- 945
Query: 108 SKLYAKDFFVYG-----NYSTRSLPHALYVLPH 135
K FF + N S R++ H V H
Sbjct: 946 -KSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIH 977
Score = 194 (73.4 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 43/86 (50%), Positives = 59/86 (68%)
Query: 62 RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKFSKLYAKDFFVY--- 118
+WC ENYIQV+SMKRARDI+DQLEGLL RVEI+++ NLN+LD+++ K FF +
Sbjct: 901 QWCYENYIQVRSMKRARDIRDQLEGLLERVEIDISSNLNELDSVR--KSIVAGFFPHTAK 958
Query: 119 ----GNYSTRSLPHALYVLPHNTQLS 140
G+Y T P +++ P N+ LS
Sbjct: 959 LQKNGSYRTVKHPQTVHIHP-NSGLS 983
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 380 (138.8 bits), Expect = 6.3e-34, P = 6.3e-34
Identities = 88/153 (57%), Positives = 103/153 (67%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+ SDKYKC EII IAAMLSIG SIFYR KDKQ+HADNA NFH+G+VGDHI
Sbjct: 827 MLSKMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAF 886
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L+ WC ENYIQV+SMKRARDI+DQLEGLL RVEI+V+ N N+LD+I+
Sbjct: 887 LKIYNSWKETNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIR- 945
Query: 108 SKLYAKDFFVYG-----NYSTRSLPHALYVLPH 135
K FF + N S R++ H V H
Sbjct: 946 -KSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIH 977
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 326 (119.8 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 74/162 (45%), Positives = 101/162 (62%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+AS++YKC E++ IAAMLS+ NSIFYR KDK +HADNARMNF + GDH+ L
Sbjct: 836 MLSKMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFVVPG-GDHLVL 894
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L +WC EN+IQ +SMKRARD++DQLEGL+ R+E+E+ C+ N D++
Sbjct: 895 LNVYTQWVESGYSTQWCFENFIQFRSMKRARDVRDQLEGLMDRIEVEL-CSSNG-DSMPI 952
Query: 108 SKLYAKDFFVY------GNYSTRSLPHALYVLPHNTQLSLSP 143
K +F + G Y T +YV P+++ P
Sbjct: 953 RKAVTAGYFYHTARLSKGGYKTVKHQQTVYVHPNSSLFEEQP 994
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 299 (110.3 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 67/138 (48%), Positives = 89/138 (64%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+AS+KY C EI+ +AAMLS+ NSIFYR KDK +HADNAR+NF L GDH+ L
Sbjct: 342 MLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVL 400
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L +WC EN++Q +SM+RARD+++QLEGLL RVE+ ++ D I+
Sbjct: 401 LNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDY--IRV 458
Query: 108 SKLYAKDFFVYGNYSTRS 125
K +F + TRS
Sbjct: 459 RKAITAGYFYHTARLTRS 476
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 299 (110.3 bits), Expect = 7.0e-26, P = 7.0e-26
Identities = 67/138 (48%), Positives = 89/138 (64%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+AS+KY C EI+ +AAMLS+ NSIFYR KDK +HADNAR+NF L GDH+ L
Sbjct: 342 MLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVL 400
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L +WC EN++Q +SM+RARD+++QLEGLL RVE+ ++ D I+
Sbjct: 401 LNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDY--IRV 458
Query: 108 SKLYAKDFFVYGNYSTRS 125
K +F + TRS
Sbjct: 459 RKAITAGYFYHTARLTRS 476
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 299 (110.3 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 67/138 (48%), Positives = 89/138 (64%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+AS+KY C EI+ +AAMLS+ NSIFYR KDK +HADNAR+NF L GDH+ L
Sbjct: 823 MLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVL 881
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L +WC EN++Q +SM+RARD+++QLEGLL RVE+ ++ D I+
Sbjct: 882 LNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDY--IRV 939
Query: 108 SKLYAKDFFVYGNYSTRS 125
K +F + TRS
Sbjct: 940 RKAITAGYFYHTARLTRS 957
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 299 (110.3 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 67/138 (48%), Positives = 89/138 (64%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+AS+KY C EI+ +AAMLS+ NSIFYR KDK +HADNAR+NF L GDH+ L
Sbjct: 824 MLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVL 882
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L +WC EN++Q +SM+RARD+++QLEGLL RVE+ ++ D I+
Sbjct: 883 LNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDY--IRV 940
Query: 108 SKLYAKDFFVYGNYSTRS 125
K +F + TRS
Sbjct: 941 RKAITAGYFYHTARLTRS 958
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 299 (110.3 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 67/138 (48%), Positives = 89/138 (64%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+AS+KY C EI+ +AAMLS+ NSIFYR KDK +HADNAR+NF L GDH+ L
Sbjct: 827 MLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVL 885
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L +WC EN++Q +SM+RARD+++QLEGLL RVE+ ++ D I+
Sbjct: 886 LNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDY--IRV 943
Query: 108 SKLYAKDFFVYGNYSTRS 125
K +F + TRS
Sbjct: 944 RKAITAGYFYHTARLTRS 961
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 299 (110.3 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 67/138 (48%), Positives = 89/138 (64%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+AS+KY C EI+ +AAMLS+ NSIFYR KDK +HADNAR+NF L GDH+ L
Sbjct: 827 MLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVL 885
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L +WC EN++Q +SM+RARD+++QLEGLL RVE+ ++ D I+
Sbjct: 886 LNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDY--IRV 943
Query: 108 SKLYAKDFFVYGNYSTRS 125
K +F + TRS
Sbjct: 944 RKAITAGYFYHTARLTRS 961
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 299 (110.3 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 67/138 (48%), Positives = 89/138 (64%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+AS+KY C EI+ +AAMLS+ NSIFYR KDK +HADNAR+NF L GDH+ L
Sbjct: 827 MLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVL 885
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L +WC EN++Q +SM+RARD+++QLEGLL RVE+ ++ D I+
Sbjct: 886 LNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDY--IRV 943
Query: 108 SKLYAKDFFVYGNYSTRS 125
K +F + TRS
Sbjct: 944 RKAITAGYFYHTARLTRS 961
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 298 (110.0 bits), Expect = 3.7e-25, P = 3.7e-25
Identities = 66/138 (47%), Positives = 88/138 (63%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK I+AS+KY C EI+ +AAMLS+ NSIFYR KDK +HADNAR+NF L GDH+ L
Sbjct: 826 MLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPG-GDHLVL 884
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
L +WC EN++Q +SM+RARD+++QLEGLL RVE+ + D ++
Sbjct: 885 LNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGLTSCQGDY--VRV 942
Query: 108 SKLYAKDFFVYGNYSTRS 125
K +F + TRS
Sbjct: 943 RKAITSGYFYHTARLTRS 960
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 288 (106.4 bits), Expect = 4.8e-24, P = 4.8e-24
Identities = 74/158 (46%), Positives = 98/158 (62%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNAR-MNFHLGDVGDHITL 60
LSK IIAS+KYKC EI+ I AMLS+GN+IFYR KDK AD AR + FH GDH+TL
Sbjct: 891 LSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFFH--PQGDHLTL 948
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKF 107
+ +WC EN+IQ +SMKRA+D++DQLE LL RVEI + N++D D+I+
Sbjct: 949 MNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIPLVSNVDDTDSIR- 1007
Query: 108 SKLYAKDFFVYGNYSTRSLPHA-LY-VLPHNTQLSLSP 143
K A FF Y++ L + L+ HN + + P
Sbjct: 1008 -KCIASGFF----YNSAKLEKSGLFRTTKHNQSVQIHP 1040
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 274 (101.5 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 69/162 (42%), Positives = 90/162 (55%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
+SK IIAS+KY+C EI+ IAAMLS ++FYR K + IHAD+AR F GDHITL+
Sbjct: 790 MSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFW-SPAGDHITLM 848
Query: 62 -------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKFS 108
RWC ENY+Q ++MKRARD++DQL GLL RVEIE + D IK
Sbjct: 849 NVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETK---SSTDTIKIR 905
Query: 109 KLYAKDFFVY-------GNYSTRSLPHALYVLPHNTQLSLSP 143
K +F G+Y T H + P++ +P
Sbjct: 906 KAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETP 947
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 274 (101.5 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 69/162 (42%), Positives = 90/162 (55%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
+SK IIAS+KY+C EI+ IAAMLS ++FYR K + IHAD+AR F GDHITL+
Sbjct: 790 MSKMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSARKGFW-SPAGDHITLM 848
Query: 62 -------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKFS 108
RWC ENY+Q ++MKRARD++DQL GLL RVEIE + D IK
Sbjct: 849 NVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVEIETK---SSTDTIKIR 905
Query: 109 KLYAKDFFVY-------GNYSTRSLPHALYVLPHNTQLSLSP 143
K +F G+Y T H + P++ +P
Sbjct: 906 KAITAGYFYNVSKLDNTGHYKTVKHKHTTHPHPNSCLFEETP 947
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 271 (100.5 bits), Expect = 2.2e-22, P = 2.2e-22
Identities = 59/112 (52%), Positives = 80/112 (71%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHIT 59
M+ K ++AS+KYKC E++ IAAMLS+ ++IFYR KDK IHAD AR NF H+ GDH++
Sbjct: 676 MMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTARKNFNHMH--GDHLS 733
Query: 60 LLR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNC 97
LL+ WC EN+IQ +SMKRARD+++QL GL+ RVEI+ V+C
Sbjct: 734 LLQVYNQWAETDYSTQWCYENFIQYRSMKRARDVREQLVGLMQRVEIDMVSC 785
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 238 (88.8 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 53/130 (40%), Positives = 80/130 (61%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML+K I+A+DK+ C+ E++ I +ML +++F+R KDK+IHAD+AR F + D GDH+TL
Sbjct: 905 MLAKAILAADKHGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFTVKDGGDHLTL 964
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVN-CNLNDLDAIK 106
L W EN++Q +S+ RARD++DQL L RVE+ V+ C N++ +
Sbjct: 965 LNIWNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVTVSSCGSNNI--VP 1022
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1023 IQKAITAGFF 1032
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 234 (87.4 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 57/120 (47%), Positives = 75/120 (62%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
MLSK++IAS KY C+ E++ I +ML +S+FYR KDK + AD AR NF GDH+TL
Sbjct: 842 MLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFTQPG-GDHLTL 900
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLND-LDAIK 106
L W EN++Q KS+ RARD++DQL L RVEIE+ N ++ LD IK
Sbjct: 901 LHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERVEIELVTNSSESLDPIK 960
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 232 (86.7 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 61/178 (34%), Positives = 100/178 (56%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML+K ++A+DK C+ E++ I AMLS +++F+R KDKQ+HAD AR F + + GDH+TL
Sbjct: 797 MLAKAVLAADKEGCVEEVLSIVAMLSEASALFFRPKDKQVHADAARGRFTVKEGGDHVTL 856
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVN-CN-LNDLDAI 105
L W EN++Q +S+ RARD+++QL L RVE+ ++ C ++++ I
Sbjct: 857 LNIWNQWLDSDYSPIWSKENFLQQRSLTRARDVREQLSKLCERVEVTLSTCGGISNMPPI 916
Query: 106 KFSKLYAKDFFVYGNYSTRSLPHALYVLPHNTQLSLSPPLNPAAVGHSRSPPFKSKIY 163
K + FF RS + + +NT + + +P++V PP + IY
Sbjct: 917 K--RAITAGFFPNAARMQRS-GDSYRTVKNNTTVYI----HPSSVMMQEDPPPRMVIY 967
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 214 (80.4 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 56/156 (35%), Positives = 87/156 (55%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
L+KT+I S +Y+C EI+ I AMLS+ +IFYR KDKQ AD + FH +GDH+TLL
Sbjct: 764 LAKTLIQSVEYECTEEILSIVAMLSV-QTIFYRPKDKQALADQRKSRFH-HSLGDHLTLL 821
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDAIKF 107
WC +N+IQ +SM+RA +++ QL+ ++ R + ++C ND+D ++
Sbjct: 822 NVFQSWCRNNYSKTWCRDNFIQERSMRRAMEVRKQLKSIMQRFGYKTMSCG-NDVDRVR- 879
Query: 108 SKLYAKDFFVYGNYSTRSLPHALYVLPHNTQLSLSP 143
+ + +F N + R L NT + L P
Sbjct: 880 -RTFCSGYFK--NSAKRQEGEGYKTLNENTLVYLHP 912
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 207 (77.9 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 54/129 (41%), Positives = 73/129 (56%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C E++ I AML++ N IFYR K+KQ HAD + FH + GDH+TLL
Sbjct: 964 LSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQKKAKFHQPE-GDHLTLL 1021
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEI-EVNCNLNDLDAIKF 107
WC EN+IQV+SMKRA+DI+ QL G++ R ++ V+C D +
Sbjct: 1022 AVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGR---DVSRV 1078
Query: 108 SKLYAKDFF 116
K FF
Sbjct: 1079 QKAICSGFF 1087
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 207 (77.9 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 54/129 (41%), Positives = 73/129 (56%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C E++ I AML++ N IFYR K+KQ HAD + FH + GDH+TLL
Sbjct: 964 LSKLLIMSVDLGCSEEVLTIVAMLNVQN-IFYRPKEKQDHADQKKAKFHQPE-GDHLTLL 1021
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEI-EVNCNLNDLDAIKF 107
WC EN+IQV+SMKRA+DI+ QL G++ R ++ V+C D +
Sbjct: 1022 AVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLLMVSCGR---DVSRV 1078
Query: 108 SKLYAKDFF 116
K FF
Sbjct: 1079 QKAICSGFF 1087
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 192 (72.6 bits), Expect = 9.4e-14, P = 9.4e-14
Identities = 45/119 (37%), Positives = 74/119 (62%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +IAS + +C E++ I AML++ N +FYR K+KQ AD + FH + GDH+TLL
Sbjct: 966 LSKVLIASVEMRCSDEMLSIVAMLNLPN-VFYRPKEKQTQADAKKAKFHDPN-GDHLTLL 1023
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC EN+IQ +++ RARD+++Q+E ++ R + +V +C +D + ++
Sbjct: 1024 NVYNAWKQSRYSKPWCAENFIQFRALTRARDVRNQIERIMQRFKYQVMSCG-SDTNRVR 1081
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 191 (72.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 48/130 (36%), Positives = 73/130 (56%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML K +I S C E++ I +MLS+ N +FYR KDKQ AD + FH + GDH+TL
Sbjct: 988 MLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTE-GDHLTL 1045
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
L WC EN+IQ +S++RA+DI+ Q+ G++ R +++V +C + ++
Sbjct: 1046 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS---TVR 1102
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1103 VQKAICSGFF 1112
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 191 (72.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 48/130 (36%), Positives = 73/130 (56%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML K +I S C E++ I +MLS+ N +FYR KDKQ AD + FH + GDH+TL
Sbjct: 957 MLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTE-GDHLTL 1014
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
L WC EN+IQ +S++RA+DI+ Q+ G++ R +++V +C + ++
Sbjct: 1015 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS---TVR 1071
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1072 VQKAICSGFF 1081
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 191 (72.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 48/130 (36%), Positives = 73/130 (56%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML K +I S C E++ I +MLS+ N +FYR KDKQ AD + FH + GDH+TL
Sbjct: 980 MLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTE-GDHLTL 1037
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
L WC EN+IQ +S++RA+DI+ Q+ G++ R +++V +C + ++
Sbjct: 1038 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS---TVR 1094
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1095 VQKAICSGFF 1104
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 191 (72.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 48/130 (36%), Positives = 73/130 (56%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML K +I S C E++ I +MLS+ N +FYR KDKQ AD + FH + GDH+TL
Sbjct: 984 MLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTE-GDHLTL 1041
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
L WC EN+IQ +S++RA+DI+ Q+ G++ R +++V +C + ++
Sbjct: 1042 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS---TVR 1098
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1099 VQKAICSGFF 1108
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 191 (72.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 48/130 (36%), Positives = 73/130 (56%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML K +I S C E++ I +MLS+ N +FYR KDKQ AD + FH + GDH+TL
Sbjct: 988 MLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTE-GDHLTL 1045
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
L WC EN+IQ +S++RA+DI+ Q+ G++ R +++V +C + ++
Sbjct: 1046 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS---TVR 1102
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1103 VQKAICSGFF 1112
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 191 (72.3 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 48/130 (36%), Positives = 73/130 (56%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML K +I S C E++ I +MLS+ N +FYR KDKQ AD + FH + GDH+TL
Sbjct: 998 MLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTE-GDHLTL 1055
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
L WC EN+IQ +S++RA+DI+ Q+ G++ R +++V +C + ++
Sbjct: 1056 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS---TVR 1112
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1113 VQKAICSGFF 1122
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 191 (72.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 48/130 (36%), Positives = 73/130 (56%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML K +I S C E++ I +MLS+ N +FYR KDKQ AD + FH + GDH+TL
Sbjct: 1010 MLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTE-GDHLTL 1067
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
L WC EN+IQ +S++RA+DI+ Q+ G++ R +++V +C + ++
Sbjct: 1068 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS---TVR 1124
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1125 VQKAICSGFF 1134
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 191 (72.3 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 48/130 (36%), Positives = 73/130 (56%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML K +I S C E++ I +MLS+ N +FYR KDKQ AD + FH + GDH+TL
Sbjct: 1012 MLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTE-GDHLTL 1069
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
L WC EN+IQ +S++RA+DI+ Q+ G++ R +++V +C + ++
Sbjct: 1070 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKS---TVR 1126
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1127 VQKAICSGFF 1136
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 189 (71.6 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 46/129 (35%), Positives = 75/129 (58%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S +C EI+ I +MLS+ N +FYR KDKQ AD + F+ + GDH+TLL
Sbjct: 1010 LSKMLIMSVALQCSDEILTIVSMLSVQN-VFYRPKDKQALADQKKAKFNQAE-GDHLTLL 1067
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIKF 107
WC EN++Q++++KR++D++ QL G++ R +++V + N +++
Sbjct: 1068 AVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVRKQLLGIMDRHKLDVVSAGKN---SVRI 1124
Query: 108 SKLYAKDFF 116
K FF
Sbjct: 1125 QKAICSGFF 1133
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 188 (71.2 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 48/130 (36%), Positives = 72/130 (55%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML K +I S C E++ I +MLS+ N +FYR KDKQ AD + FH + GDH+TL
Sbjct: 936 MLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQTE-GDHLTL 993
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
L WC EN+IQ +S++RA+DI+ Q+ G++ R +++V +C ++
Sbjct: 994 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKA---TVR 1050
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1051 VQKAICSGFF 1060
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 188 (71.2 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 48/130 (36%), Positives = 72/130 (55%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
ML K +I S C E++ I +MLS+ N +FYR KDKQ AD + FH + GDH+TL
Sbjct: 978 MLCKMLIMSVHLGCSEEMLTIVSMLSVQN-VFYRPKDKQALADQKKAKFHQPE-GDHLTL 1035
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
L WC EN+IQ +S++RA+DI+ Q+ G++ R +++V +C ++
Sbjct: 1036 LAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVVSCGKA---TVR 1092
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1093 VQKAICSGFF 1102
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 186 (70.5 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 48/156 (30%), Positives = 87/156 (55%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LS+++++S +C EI+ I +MLS+ N +FYR KD+Q+ AD+ + FH GDH+TLL
Sbjct: 907 LSRSLLSSVDNQCSDEIVTIISMLSVQN-VFYRPKDRQLEADSKKAKFH-HPYGDHLTLL 964
Query: 62 ----RW---------CCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDAIKF 107
RW C N++ + +KRARD++ Q+ + ++ ++ ++C+ +D D I+
Sbjct: 965 NVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGLKLISCH-SDPDLIR- 1022
Query: 108 SKLYAKDFFVYGNYSTRSLPHALYVLPHNTQLSLSP 143
K + FF+ N + R + T++ + P
Sbjct: 1023 -KTFVSGFFM--NAAKRDSQVGYKTINGGTEVGIHP 1055
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 185 (70.2 bits), Expect = 5.5e-13, P = 5.5e-13
Identities = 56/157 (35%), Positives = 78/157 (49%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
L+K +IAS C E++ I AMLSI S+FYR K+KQ AD + FH GDH+TLL
Sbjct: 1001 LAKVLIASVDMGCSEEMLSIVAMLSI-QSVFYRPKEKQQQADQKKAKFH-DPHGDHLTLL 1058
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDAIKF 107
WC EN+IQ + ++RA+D++ QL G++ R + V+C N K
Sbjct: 1059 NVYNAWKRSGFSNAWCYENFIQARQIRRAQDVRQQLLGIMQRYHHKIVSCGRN---TTKV 1115
Query: 108 SKLYAKDFFVYGNYSTRSLPHALY-VLPHNTQLSLSP 143
+ FF S R P Y L T + + P
Sbjct: 1116 RQALCTGFF---RNSARKDPQEGYKTLVEGTPVYMHP 1149
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 180 (68.4 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 52/163 (31%), Positives = 82/163 (50%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +IAS C EI+ + AMLS+ N +FYR K+KQ AD + F + GDH+TLL
Sbjct: 932 LSKMLIASVDLGCSDEILTVVAMLSVQN-VFYRPKEKQALADQKKAKFFQPE-GDHLTLL 989
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIKF 107
WC EN++Q +S++RA+D++ QL ++ R ++++ + N K
Sbjct: 990 NVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRYKLDIISAGRN---YTKI 1046
Query: 108 SKLYAKDFFVYGN-------YSTRSLPHALYVLPHNTQLSLSP 143
K FF + Y T +Y+ P +T + +P
Sbjct: 1047 QKAICSGFFANASKKDPNEGYKTLVEGQPVYIHPSSTLFNRNP 1089
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 176 (67.0 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 52/156 (33%), Positives = 79/156 (50%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK ++AS C EI+ + AM+ GN IFYR ++KQ AD R F + GDH+TLL
Sbjct: 939 LSKMLLASVDLGCSDEILTMIAMIQTGN-IFYRPREKQAQADQKRAKFFQPE-GDHLTLL 996
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKFS 108
WC EN+IQ +S++RA+D++ QL ++ + +++V + I+
Sbjct: 997 AVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKYKLDVVTAGKNFTKIR-- 1054
Query: 109 KLYAKDFFVYGNYSTRSLPHALY-VLPHNTQLSLSP 143
K FF +G R P Y L N + + P
Sbjct: 1055 KAITAGFFFHG---ARKDPQEGYRTLVENQPVYIHP 1087
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 175 (66.7 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 42/118 (35%), Positives = 72/118 (61%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK II ++ YKC EII I +MLS+ S+FYR K++ +D AR F++ + DH+ LL
Sbjct: 915 LSKLIIIAEDYKCTEEIITIVSMLSVP-SVFYRPKERAEESDAAREKFNVPE-SDHLMLL 972
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
WC ++++ K++KRARDI+ QL ++++ +I + +++D D ++
Sbjct: 973 NIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSKQKISLE-SVSDWDIVR 1029
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 165 (63.1 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 39/119 (32%), Positives = 70/119 (58%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
L+K II +++Y C E+I I +MLS+ N +FYR K++Q +D AR F + + DH+T L
Sbjct: 726 LAKLIIMAEEYGCTEEMITIVSMLSVPN-VFYRPKERQEESDAAREKFFVPE-SDHLTFL 783
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDAIK 106
WC +++ KS++RA++++DQL ++ +++ V+C D D ++
Sbjct: 784 HVYSQWKANGHSDAWCSRHFLHSKSLRRAKEVRDQLLDIMKTQKMDIVSCG-TDWDVVR 841
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 163 (62.4 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 39/120 (32%), Positives = 72/120 (60%)
Query: 2 LSKTII-ASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
L+K II A+++Y C E++ I +MLS+ N +FYR K++Q +D AR F + + DH+TL
Sbjct: 611 LAKLIITAAEQYGCSEEMLTIVSMLSVPN-VFYRPKERQEESDAAREKFFVPE-SDHLTL 668
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDAIK 106
L WC ++++ K+++RA++++DQL ++ ++ ++C D D I+
Sbjct: 669 LHVYTQWKSNGYSDHWCTKHFLHAKTLRRAKEVRDQLNDIMVMQKLPLISCG-TDWDEIR 727
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 162 (62.1 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 44/118 (37%), Positives = 66/118 (55%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK ++ + + C E++ I +MLS+ +FYR K++Q AD AR F + DH+TLL
Sbjct: 789 LSKILLIAVRNGCSDEMLTIVSMLSVPQ-VFYRPKERQKEADIARNKFFIAK-SDHLTLL 846
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
WC ++++Q KS+ RARDI+DQL +L +I V + D D IK
Sbjct: 847 NVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLLTILKSQKIPVISSGKDWDIIK 904
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 157 (60.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 46/131 (35%), Positives = 72/131 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S + C EI+ IAAMLS N F R KD +I AD+A+ +F D GDH+T+L
Sbjct: 498 LSKMLIVSAERSCSNEILTIAAMLSAPNC-FMRPKDNRIEADSAKKSFDHFD-GDHLTML 555
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDAIK- 106
WC +N++ +++K+A ++ QL +LTR ++ V+ ++N +
Sbjct: 556 NVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPLVSGDVNSKFYYEN 615
Query: 107 FSKLYAKDFFV 117
K A FF+
Sbjct: 616 IKKCIAAGFFM 626
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 155 (59.6 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK ++ S + C +++ I +MLS+ N IFYR ++K + AD + F + GD IT L
Sbjct: 1056 LSKILLTSLNFNCTDDVVTIVSMLSVQN-IFYRPQNKALLADKKKNKFIMPQ-GDLITYL 1113
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKFS 108
WC EN+IQ +++KRA+D++ Q+ + + +V + + DA K+
Sbjct: 1114 NIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYV 1173
Query: 109 KLYAKDFFVYGNY-STRSLPHALYVLPHNTQLSLSP 143
+ Y N+ R L N Q+ + P
Sbjct: 1174 NICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHP 1209
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 155 (59.6 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 45/156 (28%), Positives = 76/156 (48%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK ++ S + C +++ I +MLS+ N IFYR ++K + AD + F + GD IT L
Sbjct: 1056 LSKILLTSLNFNCTDDVVTIVSMLSVQN-IFYRPQNKALLADKKKNKFIMPQ-GDLITYL 1113
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKFS 108
WC EN+IQ +++KRA+D++ Q+ + + +V + + DA K+
Sbjct: 1114 NIYNKWKENSFSNYWCHENFIQSRALKRAQDVRKQMLSIFEKYNYQVKKSTSKNDATKYV 1173
Query: 109 KLYAKDFFVYGNY-STRSLPHALYVLPHNTQLSLSP 143
+ Y N+ R L N Q+ + P
Sbjct: 1174 NICKSICSGYFNHVCKRDTQQGYTTLLTNQQVFIHP 1209
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 151 (58.2 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 41/110 (37%), Positives = 63/110 (57%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDV-GDHIT 59
+ +K I+ SDK+ +II I AML+ +++FYR KDK+ AD + F+ D+ GD
Sbjct: 657 VFTKCILTSDKFDNTKQIISIIAMLNESSNLFYRPKDKKELADKRKQEFN--DLQGDQFM 714
Query: 60 LLR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVN 96
LL+ WC + +IQ K+MKR ++I +QL L ++ IEVN
Sbjct: 715 LLKIWQQWVDSGYSVQWCQDYFIQYKTMKRIKNIYEQLIRLSKKIGIEVN 764
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 150 (57.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 47/158 (29%), Positives = 81/158 (51%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
+SK +I S ++ C EI+ ++AMLS+ N F R ++ Q AD A+ F H+ GDH+TL
Sbjct: 502 MSKMLIVSPEFNCSNEILSVSAMLSVPNC-FVRPREAQKAADEAKARFGHID--GDHLTL 558
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDA-I 105
L WC EN++ ++MK A +++ QL +++R +++ + + N D +
Sbjct: 559 LNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYV 618
Query: 106 KFSKLYAKDFFVYGNYSTRSLPHALYVLPHNTQLSLSP 143
K +F+ + R+ H L V N + L P
Sbjct: 619 NIRKAMLAGYFMQVAHLERT-GHYLTV-KDNQVVHLHP 654
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 152 (58.6 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 40/129 (31%), Positives = 73/129 (56%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I +++ C +I+ I +MLS+ S+FYR K + +D +R F + + DH+TLL
Sbjct: 1083 LSKMVIVAEQLGCGQDIVTIVSMLSMP-SVFYRPKGAEEESDASREKFFVPE-SDHLTLL 1140
Query: 62 -------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIKF 107
+WC E+YI +K+M++ R+++ QL ++ + +++V +C N D I+
Sbjct: 1141 HVYQQWKINNYSSQWCAEHYIHIKAMRKVREVRGQLLDIMVQHDMKVESCGSN-WDIIR- 1198
Query: 108 SKLYAKDFF 116
K +F
Sbjct: 1199 -KAITSSYF 1206
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 151 (58.2 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 36/115 (31%), Positives = 65/115 (56%)
Query: 6 IIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLLR--- 62
+I + + C E++II +MLS+ SIFYR K ++ AD R F + DH+T L
Sbjct: 961 LIVACRMGCSAEVLIIVSMLSVP-SIFYRPKGREDEADGVREKFQRPE-SDHLTYLNVYQ 1018
Query: 63 ----------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC E++I +K+M++ R+++ QL+ ++T+ + V +C + D D ++
Sbjct: 1019 QWRQNNYSSTWCNEHFIHIKAMRKVREVRQQLKDIMTQQNLSVISCGI-DWDIVR 1072
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 148 (57.2 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 48/158 (30%), Positives = 81/158 (51%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDV-GDHITL 60
++K +I S ++ C EI+ ++AMLS+ N F R ++ Q AD A+ F G + GDH+TL
Sbjct: 498 MAKMLIVSPEFNCSNEILSVSAMLSVPNC-FIRPREAQKAADEAKARF--GHIEGDHLTL 554
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDA-I 105
L WC EN+I ++MK A +++ QL +++R +++ + + N D I
Sbjct: 555 LNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVRIMSRFNLKMCSTDFNSRDYYI 614
Query: 106 KFSKLYAKDFFVYGNYSTRSLPHALYVLPHNTQLSLSP 143
K +F+ + R+ H L V N + L P
Sbjct: 615 NIRKAMLAGYFMQVAHLERT-GHYLTV-KDNQVVHLHP 650
>TAIR|locus:2147785 [details] [associations]
symbol:AT5G14900 species:3702 "Arabidopsis thaliana"
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR007502 Pfam:PF04408 SMART:SM00847
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0004386
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261
KO:K12820 EMBL:AL391146 OMA:IRTVTHI IPI:IPI00537280 PIR:T51435
RefSeq:NP_196994.1 UniGene:At.65514 ProteinModelPortal:Q9LFR5
SMR:Q9LFR5 EnsemblPlants:AT5G14900.1 GeneID:831342
KEGG:ath:AT5G14900 TAIR:At5g14900 InParanoid:Q9LFR5
PhylomeDB:Q9LFR5 ProtClustDB:CLSN2916823 Genevestigator:Q9LFR5
Uniprot:Q9LFR5
Length = 301
Score = 141 (54.7 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
++K +I S ++ C EI+ I+AMLS+ N + Q AD A+ +F H+ GDH+TL
Sbjct: 68 MAKMLIVSPQFNCSNEILSISAMLSVPNCFIRPRGEAQKAADEAKSSFAHID--GDHLTL 125
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCN 98
L WCC +I ++MK A +++QL ++ R +I++ C+
Sbjct: 126 LNLFHAFLQNNQDPNWCCTKFINYRAMKSAVSVREQLVRIMLRFQIKL-CS 175
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 149 (57.5 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 37/119 (31%), Positives = 67/119 (56%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C +I+II +MLS+ SIFYR K ++ +D R F + + DH+T L
Sbjct: 986 LSKMLIVSCDMSCSADILIIVSMLSVP-SIFYRPKGREEESDQVREKFSVPE-SDHLTYL 1043
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDAIK 106
WC +++I K+M++ R+++ QL+ ++ + ++ ++C +D D I+
Sbjct: 1044 NVYLQWKNNNYSSIWCNDHFIHTKAMRKVREVRAQLKDIMVQQKMNLISCG-SDWDVIR 1101
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 147 (56.8 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 34/118 (28%), Positives = 68/118 (57%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S + C E++ I +MLS+ +IF+R K ++ AD + F + + DH+T L
Sbjct: 865 LSKMLIMSAEMGCSDEVLTIVSMLSVP-AIFFRPKGREEEADAKKEKFQVPE-SDHLTFL 922
Query: 62 -------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
+WC +NY+ VK++K+ R+++ QL+ ++ +++ + N ++ D ++
Sbjct: 923 NVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVR 980
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 147 (56.8 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 34/118 (28%), Positives = 68/118 (57%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S + C E++ I +MLS+ +IF+R K ++ AD + F + + DH+T L
Sbjct: 865 LSKMLIMSAEMGCSDEVLTIVSMLSVP-AIFFRPKGREEEADAKKEKFQVPE-SDHLTFL 922
Query: 62 -------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
+WC +NY+ VK++K+ R+++ QL+ ++ +++ + N ++ D ++
Sbjct: 923 NVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLPLISNGSEWDIVR 980
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 144 (55.7 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 45/162 (27%), Positives = 77/162 (47%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N IF +++ HA F + + GDH+T+
Sbjct: 460 MFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPPNQKSHAIRVHRKFAVEE-GDHLTM 517
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK- 106
L +WC E+++ K + RA +++QL+ LL + ++ + D D +
Sbjct: 518 LNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLR 577
Query: 107 --FSKLYAKD--FFVYGNYSTRSLPHALYVLPHNTQLSLSPP 144
S +A F G Y T H L++ P + + PP
Sbjct: 578 CIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPP 619
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 144 (55.7 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 45/162 (27%), Positives = 77/162 (47%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N IF +++ HA F + + GDH+T+
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPPNQKSHAIRVHRKFAVEE-GDHLTM 548
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK- 106
L +WC E+++ K + RA +++QL+ LL + ++ + D D +
Sbjct: 549 LNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLVLR 608
Query: 107 --FSKLYAKD--FFVYGNYSTRSLPHALYVLPHNTQLSLSPP 144
S +A F G Y T H L++ P + + PP
Sbjct: 609 CIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPP 650
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 146 (56.5 bits), Expect = 7.3e-09, P = 7.3e-09
Identities = 40/102 (39%), Positives = 55/102 (53%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S + C E++ I AMLS+ N I+ R ++KQ AD R F DH+TLL
Sbjct: 935 LSKVLITSVELGCSEEMLSIIAMLSVPN-IWSRPREKQQEADRQRAQF-ANPESDHLTLL 992
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTR 90
WC E+YIQ + M+RA D++ QL L+ R
Sbjct: 993 NVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMDR 1034
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/133 (31%), Positives = 73/133 (54%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M SKT+I S +++C E++II ++LS+ SIF+ K+K+ ++ + F D GDHIT
Sbjct: 510 MYSKTLIKSIEFECSEEVLIIISILSV-ESIFFTPKEKKKEVEDVKKIFFSPD-GDHITF 567
Query: 61 L---------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDA 104
L +WC +++I +KSM + ++ +QL +++ V+C +D D
Sbjct: 568 LNVFREFQKSKPQQQQQWCFDHFINLKSMIKVLNVFEQLVKYCISLKLPIVSCG-SDFDR 626
Query: 105 IKFSKLYAKDFFV 117
IK K + FF+
Sbjct: 627 IK--KSFIGGFFL 637
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 141 (54.7 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 42/132 (31%), Positives = 66/132 (50%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +IAS ++ C EI+ I AMLS+ F R + + AD A+M F H+ GDH+TL
Sbjct: 504 LAKMLIASCQHNCSNEILSITAMLSVPQC-FVRPNEAKKAADEAKMRFAHID--GDHLTL 560
Query: 61 LR-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDA-I 105
L WC EN+I +S+K A +++ QL ++ R + + D +
Sbjct: 561 LNVYHAFKQSSEDPNWCYENFINFRSLKSADNVRQQLARIMDRFNLRRTSTEFTSKDYYV 620
Query: 106 KFSKLYAKDFFV 117
K + FF+
Sbjct: 621 NIRKALVQGFFM 632
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 44/162 (27%), Positives = 77/162 (47%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N +F +++ A A F + + GDH+T+
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVVPSNQKSQAIRAHRKFAVEE-GDHLTM 548
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK- 106
L +WC E+++ K + RA +++QL+ LL + ++ + D D +
Sbjct: 549 LNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDPVLR 608
Query: 107 --FSKLYAKD--FFVYGNYSTRSLPHALYVLPHNTQLSLSPP 144
S +A F G Y T H L++ P + + PP
Sbjct: 609 CIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPP 650
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 140 (54.3 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N +F +++ A F + + GDH+T+
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVFPSNQKSQATRVHRKFAVEE-GDHLTM 548
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK- 106
L +WC E+++ K + RA ++DQL+ LL + ++ + D D +
Sbjct: 549 LNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSEGDPDPVLR 608
Query: 107 --FSKLYAKD--FFVYGNYSTRSLPHALYVLPHNTQLSLSPP 144
S +A F G Y T H L++ P + + PP
Sbjct: 609 CIVSGFFANAARFHSTGAYRTIRDDHELHIHPASVLYAEKPP 650
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 98 (39.6 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 3 SKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
SK +I ++++ CL E++I A+LS+ SIFY ++K+ A ++ +F + GDH+T L
Sbjct: 508 SKALILANQFNCLEEMLITVAVLSV-ESIFYDPREKREEARTSKNHFASVE-GDHLTYL 564
Score = 93 (37.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 62 RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKFSKLYAKDFFV 117
+WC ENY+ +S+K ARDI Q+ + ++ V+ ND+ + F + A FF+
Sbjct: 592 KWCKENYVNSRSLKHARDIYRQIREHVEQIGFNVSSCGNDM--LAFRRCLAASFFL 645
>RGD|1307239 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10116 "Rattus norvegicus" [GO:0000182 "rDNA binding"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=ISO] [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=ISO] InterPro:IPR007502
Pfam:PF04408 SMART:SM00847 RGD:1307239 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 IPI:IPI00952339
Ensembl:ENSRNOT00000068255 UCSC:RGD:1307239 Uniprot:D3ZWE8
Length = 475
Score = 135 (52.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 31/117 (26%), Positives = 61/117 (52%)
Query: 3 SKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLLR 62
+KTI+ S K+ C EI+ I ++LS+ +S+ Y ++ + R F + GDHITLL
Sbjct: 275 AKTILLSSKFHCTEEILTIVSLLSV-DSVLYNPPARRDEVQSVRKKF-ISSEGDHITLLN 332
Query: 63 -------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
WC EN++ K+M +++ QL + ++ + + + D+++++
Sbjct: 333 IYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLRDICLKMSMPIMSSRGDMESVR 389
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 135 (52.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 35/119 (29%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C EI++I +MLS+ +IFYR K ++ +D R F + + DH+T L
Sbjct: 267 LSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYL 324
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC +++I K+M++ R+++ QL+ ++ + + + +C D D ++
Sbjct: 325 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG-TDWDIVR 382
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 136 (52.9 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 43/150 (28%), Positives = 73/150 (48%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N IF +++ A F + + GDH+T+
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPGNQKSQAIRVHRKFAVEE-GDHLTM 548
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK- 106
L +WC E+++ K + RA +++QL+ LL + ++ + D D +
Sbjct: 549 LNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEGDPDPVLR 608
Query: 107 --FSKLYAKD--FFVYGNYSTRSLPHALYV 132
S +A F G YS PH+LY+
Sbjct: 609 CIVSGFFANAARFHSTGAYSVILSPHSLYL 638
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 136 (52.9 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 44/162 (27%), Positives = 76/162 (46%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N IF +++ A F + + GDH+T+
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPSNQKSQAIRVHRKFAVEE-GDHLTM 548
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK- 106
L +WC E+++ K + RA +++QL+ LL + ++ + D D +
Sbjct: 549 LNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPKKSSEGDPDPVLR 608
Query: 107 --FSKLYAKD--FFVYGNYSTRSLPHALYVLPHNTQLSLSPP 144
S +A F G Y T H L++ P + + PP
Sbjct: 609 CIVSGFFANAARFHSTGVYRTIRDDHELHIHPASVLYAEKPP 650
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 135 (52.6 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 33/117 (28%), Positives = 60/117 (51%)
Query: 3 SKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLLR 62
+KTI+ S K+ C EI+ I A+LS+ +SI Y ++ + R F + GDH+TLL
Sbjct: 514 AKTILLSPKFHCTEEILTIVALLSV-DSILYNPPSRRDEVQSVRKKF-VSSEGDHLTLLN 571
Query: 63 -------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
WC EN++ K+M +++ QL + ++ + + + D ++I+
Sbjct: 572 VYRTFKNTGGNKEWCKENFVNSKNMMLVAEVRAQLRDICIKMSMPIVSSRGDTESIR 628
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 135 (52.6 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 35/119 (29%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C EI++I +MLS+ +IFYR K ++ +D R F + + DH+T L
Sbjct: 494 LSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYL 551
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC +++I K+M++ R+++ QL+ ++ + + + +C D D ++
Sbjct: 552 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG-TDWDIVR 609
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 137 (53.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 37/119 (31%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S ++C EI+II +MLS SIF K+ ++ + F + + DH+TLL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLS-SPSIFLESKENNESIESKKEKFTVPE-SDHLTLL 1009
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDAIK 106
WC +N+IQ K++ +A+++ QL ++ + I+ V+C+ N + I+
Sbjct: 1010 NIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCD-NKWELIR 1067
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 137 (53.3 bits), Expect = 6.5e-08, P = 6.5e-08
Identities = 37/119 (31%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S ++C EI+II +MLS SIF K+ ++ + F + + DH+TLL
Sbjct: 952 LSKIVIYSQNFQCTKEILIIVSMLS-SPSIFLESKENNESIESKKEKFTVPE-SDHLTLL 1009
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDAIK 106
WC +N+IQ K++ +A+++ QL ++ + I+ V+C+ N + I+
Sbjct: 1010 NIYLQWRSHNYSYSWCTKNFIQYKALNKAKEVYSQLIDIIKTLNIKNVSCD-NKWELIR 1067
>UNIPROTKB|E1C094 [details] [associations]
symbol:E1C094 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AADN02054197 EMBL:AADN02054196
IPI:IPI00591998 Ensembl:ENSGALT00000001141 Uniprot:E1C094
Length = 1164
Score = 137 (53.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 35/119 (29%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C EI++I +MLS+ +IFYR K ++ +D R F + + DH+T L
Sbjct: 892 LSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQVREKFAVPE-SDHLTYL 949
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC +++I K+M++ R+++ QL+ ++ + + + +C D D ++
Sbjct: 950 NVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG-TDWDVVR 1007
>UNIPROTKB|F1NY80 [details] [associations]
symbol:F1NY80 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
EMBL:AADN02054197 EMBL:AADN02054196 IPI:IPI00821409
Ensembl:ENSGALT00000038723 Uniprot:F1NY80
Length = 1170
Score = 137 (53.3 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 35/119 (29%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C EI++I +MLS+ +IFYR K ++ +D R F + + DH+T L
Sbjct: 898 LSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQVREKFAVPE-SDHLTYL 955
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC +++I K+M++ R+++ QL+ ++ + + + +C D D ++
Sbjct: 956 NVYLQWKNNNYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG-TDWDVVR 1013
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 134 (52.2 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 31/117 (26%), Positives = 61/117 (52%)
Query: 3 SKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLLR 62
+KTI+ S K+ C EI+ I ++LS+ +S+ Y ++ + R F + GDHITLL
Sbjct: 498 AKTILLSSKFHCTEEILTIVSLLSV-DSVLYNPPARRDEVQSVRKKF-ISSEGDHITLLN 555
Query: 63 -------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
WC EN++ K+M +++ QL + ++ + + + D+++++
Sbjct: 556 IYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREICLKMSMPIMSSRGDMESVR 612
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 133 (51.9 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 35/118 (29%), Positives = 62/118 (52%)
Query: 3 SKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLLR 62
+KTI+ S K+ C EI+ I ++LS+ +S+ Y ++ R F L GDHITLL
Sbjct: 416 AKTILLSPKFHCTEEILTIVSLLSV-DSVLYNPPSRRDEVQAMRKKF-LSSEGDHITLLN 473
Query: 63 -------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDAIK 106
WC EN++ ++M A +++ QL + ++ + V+C D+++I+
Sbjct: 474 IYRTFKSLGGDKDWCRENFVNSRNMMLAAEVRAQLRDICLKMSMPMVSCR-GDVESIR 530
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 134 (52.2 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +IAS Y C E++ I AMLS+ F R + + AD A+M F H+ GDH+TL
Sbjct: 538 LAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHID--GDHLTL 594
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEI 93
L +WC +N+I +S+ A +++ QL ++ R +
Sbjct: 595 LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNL 640
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 134 (52.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +IAS Y C E++ I AMLS+ F R + + AD A+M F H+ GDH+TL
Sbjct: 571 LAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHID--GDHLTL 627
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEI 93
L +WC +N+I +S+ A +++ QL ++ R +
Sbjct: 628 LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNL 673
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 134 (52.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +IAS Y C E++ I AMLS+ F R + + AD A+M F H+ GDH+TL
Sbjct: 571 LAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHID--GDHLTL 627
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEI 93
L +WC +N+I +S+ A +++ QL ++ R +
Sbjct: 628 LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNL 673
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 134 (52.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +IAS Y C E++ I AMLS+ F R + + AD A+M F H+ GDH+TL
Sbjct: 571 LAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHID--GDHLTL 627
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEI 93
L +WC +N+I +S+ A +++ QL ++ R +
Sbjct: 628 LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNL 673
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 134 (52.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +IAS Y C E++ I AMLS+ F R + + AD A+M F H+ GDH+TL
Sbjct: 571 LAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHID--GDHLTL 627
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEI 93
L +WC +N+I +S+ A +++ QL ++ R +
Sbjct: 628 LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNL 673
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 134 (52.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +IAS Y C E++ I AMLS+ F R + + AD A+M F H+ GDH+TL
Sbjct: 571 LAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHID--GDHLTL 627
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEI 93
L +WC +N+I +S+ A +++ QL ++ R +
Sbjct: 628 LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNL 673
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 134 (52.2 bits), Expect = 8.6e-08, P = 8.6e-08
Identities = 36/106 (33%), Positives = 57/106 (53%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +IAS Y C E++ I AMLS+ F R + + AD A+M F H+ GDH+TL
Sbjct: 571 LAKMVIASCDYNCSNEVLSITAMLSVPQC-FVRPTEAKKAADEAKMRFAHID--GDHLTL 627
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEI 93
L +WC +N+I +S+ A +++ QL ++ R +
Sbjct: 628 LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNL 673
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 133 (51.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 43/162 (26%), Positives = 75/162 (46%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N IF +++ A F + + GDH+T+
Sbjct: 481 MFAKMLLESGNFGCSKEIVTIAAMMQIQN-IFVAPHNQRKSAAREHRKFAVAE-GDHLTM 538
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK- 106
L +WC ++++ K + RA +++QL LL + ++ + D D I
Sbjct: 539 LNVYEAFIKHQKSSQWCQDHFLNYKGLLRATAVREQLRHLLNKFKVPRTSSEGDPDVILR 598
Query: 107 --FSKLYAKDFFVY--GNYSTRSLPHALYVLPHNTQLSLSPP 144
S +A ++ G+Y T LY+ P + PP
Sbjct: 599 CIVSGFFANAARMHHSGSYRTLRDDRELYIHPDSVLYGEKPP 640
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 135 (52.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/119 (29%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C EI++I +MLS+ +IFYR K ++ +D R F + + DH+T L
Sbjct: 954 LSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYL 1011
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC +++I K+M++ R+++ QL+ ++ + + + +C D D ++
Sbjct: 1012 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG-TDWDIVR 1069
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 135 (52.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/119 (29%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C EI++I +MLS+ +IFYR K ++ +D R F + + DH+T L
Sbjct: 955 LSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYL 1012
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC +++I K+M++ R+++ QL+ ++ + + + +C D D ++
Sbjct: 1013 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG-TDWDIVR 1070
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 135 (52.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 35/119 (29%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C EI++I +MLS+ +IFYR K ++ +D R F + + DH+T L
Sbjct: 956 LSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLTYL 1013
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC +++I K+M++ R+++ QL+ ++ + + + +C D D ++
Sbjct: 1014 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG-TDWDIVR 1071
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 134 (52.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 35/130 (26%), Positives = 69/130 (53%)
Query: 3 SKTII-ASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
SK I+ A++KY C+ EI+ +A+ML+ N+IFY K K+ A+N + F + GD + L
Sbjct: 959 SKMILSAAEKYNCVDEILNVASMLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFL 1018
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVN-CNLNDLDAIK- 106
+C ++++Q ++ + +D++ QL + +++I + C + + ++I
Sbjct: 1019 NIYKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINN 1078
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1079 IKKSIVSAFF 1088
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 134 (52.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 35/130 (26%), Positives = 69/130 (53%)
Query: 3 SKTII-ASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
SK I+ A++KY C+ EI+ +A+ML+ N+IFY K K+ A+N + F + GD + L
Sbjct: 959 SKMILSAAEKYNCVDEILNVASMLTHANNIFYVQKGKEKEAENIKKMFIIEGGGDFLLFL 1018
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVN-CNLNDLDAIK- 106
+C ++++Q ++ + +D++ QL + +++I + C + + ++I
Sbjct: 1019 NIYKQCEENNFSTSFCYDHFLQYHTLIKVKDVKTQLLSICEKIDIPITTCGIENHESINN 1078
Query: 107 FSKLYAKDFF 116
K FF
Sbjct: 1079 IKKSIVSAFF 1088
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 131 (51.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 34/110 (30%), Positives = 60/110 (54%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M++KT+++++ + CL E++ IAAM S G ++ + + ++ ++ R F G+ GDH+T
Sbjct: 461 MMAKTLLSAESFGCLSEMLTIAAMTSAGGDVWIQHEGERKQFESRRRKFAAGE-GDHLTF 519
Query: 61 LR--------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVN 96
L +C EN + K+M RA I+ QL+ L R I V+
Sbjct: 520 LNVYQAFVTKGRKESGFCHENLLNYKTMSRAVSIRAQLKRYLERFGIRVD 569
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 130 (50.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 40/159 (25%), Positives = 73/159 (45%)
Query: 3 SKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLLR 62
SKTI+ S K+ C EI+ I ++LS+ +S+ Y ++ + R F + GDH+TLL
Sbjct: 460 SKTILLSPKFHCTEEILTIVSLLSV-DSVLYNPPARRDEVQSVRKKF-ISSEGDHLTLLN 517
Query: 63 -------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK--- 106
WC EN++ ++M D++ QL + ++ + + + +D I+
Sbjct: 518 VYRAFKNVSGNKEWCKENFVNGRNMMLVSDVRAQLRDICVKLSMPMESSRSDTANIRRCL 577
Query: 107 FSKLY--AKDFFVYGNYSTRSLPHALYVLPHNTQLSLSP 143
L+ A + G YST + + + P + P
Sbjct: 578 AHSLFMNAAELQPDGTYSTVNSHQLVAIHPSSVLFHCKP 616
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 130 (50.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 44/162 (27%), Positives = 75/162 (46%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N IF +++ A F + + GDH+T+
Sbjct: 493 MFAKMLLESGNFGCSQEILTIAAMMQIQN-IFLIPPNQKSQAARQHRKFAVEE-GDHLTM 550
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK- 106
L +WC E+++ K + RA +++QL+ LL ++ + D D +
Sbjct: 551 LNVYEAFVKHSKSSQWCQEHFLNYKGLVRASVVREQLKKLLVCFKVPKKSSEGDPDPVLR 610
Query: 107 --FSKLYAK--DFFVYGNYSTRSLPHALYVLPHNTQLSLSPP 144
S +A F G Y T H L++ P + + PP
Sbjct: 611 CIVSGFFANAAKFHSTGAYRTIRDDHELHIHPTSVLYAEKPP 652
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 130 (50.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +I S + C EI+ I AMLS+ + R + + AD A+ F H+ GDH+TL
Sbjct: 515 LAKMLITSTELNCSNEILSITAMLSVPQC-WVRPNEMRTEADEAKARFAHID--GDHLTL 571
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDA-I 105
L +WC +N+I ++MK A ++ QL ++ + + V+ + D +
Sbjct: 572 LNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYL 631
Query: 106 KFSKLYAKDFFVYGNYSTRSLPHALYVLPHNTQL-SLSP 143
K FF+ + RS H YV + QL +L P
Sbjct: 632 NIRKALVAGFFMQVAHLERS-GH--YVTVKDNQLVNLHP 667
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 130 (50.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 47/159 (29%), Positives = 76/159 (47%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +I S + C EI+ I AMLS+ + R + + AD A+ F H+ GDH+TL
Sbjct: 515 LAKMLITSTELNCSNEILSITAMLSVPQC-WVRPNEMRTEADEAKARFAHID--GDHLTL 571
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDA-I 105
L +WC +N+I ++MK A ++ QL ++ + + V+ + D +
Sbjct: 572 LNVYHSFKQNQEDPQWCYDNFINYRTMKTADTVRTQLSRVMDKYNLRRVSTDFKSRDYYL 631
Query: 106 KFSKLYAKDFFVYGNYSTRSLPHALYVLPHNTQL-SLSP 143
K FF+ + RS H YV + QL +L P
Sbjct: 632 NIRKALVAGFFMQVAHLERS-GH--YVTVKDNQLVNLHP 667
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 129 (50.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 34/118 (28%), Positives = 61/118 (51%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N IF +++ HA F + + GDH+T+
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPPNQKSHAIRVHRKFAVEE-GDHLTM 548
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAI 105
L +WC E+++ K + RA +++QL+ LL + ++ + D D +
Sbjct: 549 LNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVKFQVPRKSSEGDPDLV 606
>UNIPROTKB|Q05BE5 [details] [associations]
symbol:DHX33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33,
isoform CRA_c" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 EMBL:CH471108 GO:GO:0004386 InterPro:IPR011709
Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC004148 UniGene:Hs.250456
HGNC:HGNC:16718 ChiTaRS:DHX33 EMBL:BC050409 IPI:IPI00789223
SMR:Q05BE5 Ensembl:ENST00000433302 UCSC:uc010clf.3
HOVERGEN:HBG082280 Uniprot:Q05BE5
Length = 483
Score = 127 (49.8 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 29/117 (24%), Positives = 60/117 (51%)
Query: 3 SKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLLR 62
+KTI+ S K+ C EI+ I ++LS+ +S+ + ++ R F + GDH+TLL
Sbjct: 283 AKTILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRREEVQGVRKKF-ISSEGDHMTLLN 340
Query: 63 -------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
WC EN++ K+M +++ QL + ++ + + + D+++++
Sbjct: 341 IYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVR 397
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 131 (51.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 34/119 (28%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C EI++I +MLS+ +IFYR K ++ +D R F + + DH++ L
Sbjct: 954 LSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLSYL 1011
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC +++I K+M++ R+++ QL+ ++ + + + +C D D ++
Sbjct: 1012 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG-TDWDIVR 1069
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 131 (51.2 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 34/119 (28%), Positives = 65/119 (54%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
LSK +I S C EI++I +MLS+ +IFYR K ++ +D R F + + DH++ L
Sbjct: 955 LSKMLIVSCDMGCSSEILLIVSMLSVP-AIFYRPKGREEESDQIREKFAVPE-SDHLSYL 1012
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEV-NCNLNDLDAIK 106
WC +++I K+M++ R+++ QL+ ++ + + + +C D D ++
Sbjct: 1013 NVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCG-TDWDIVR 1070
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 128 (50.1 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 44/156 (28%), Positives = 74/156 (47%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M SK ++ S ++ C E++ I AM+ I +F ++ AD R F + + GDH+T+
Sbjct: 510 MHSKCLLKSAEFGCSTEMVTIVAMMQI-QDVFITPYRQRHQADVIRKKFAVEE-GDHMTM 567
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-------VNCNLN 100
L +WC ++++ + + RA +++ QL LL R EIE +NC+ N
Sbjct: 568 LNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIEKVSSRGLINCSEN 627
Query: 101 DLDAIK---FSKLYAKDFFVYGNYST--RSLPHALY 131
+ FS+ A + G Y T S P +Y
Sbjct: 628 IRQCLVTGFFSQ--AAQYHYTGKYMTVKESFPFNMY 661
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 127 (49.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 29/117 (24%), Positives = 60/117 (51%)
Query: 3 SKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLLR 62
+KTI+ S K+ C EI+ I ++LS+ +S+ + ++ R F + GDH+TLL
Sbjct: 417 AKTILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRREEVQGVRKKF-ISSEGDHMTLLN 474
Query: 63 -------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
WC EN++ K+M +++ QL + ++ + + + D+++++
Sbjct: 475 IYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVR 531
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 128 (50.1 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 43/138 (31%), Positives = 71/138 (51%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYR-LKDKQIHADNARMNF------HL-- 51
ML+ +I S +++C EI+ I AMLS+ N +F R KDK+ AD+A+ F H+
Sbjct: 525 MLAVMLIGSFEFQCSQEILTIVAMLSVPN-VFIRPTKDKK-RADDAKNIFAHPDGDHITL 582
Query: 52 --------GDVGDHITLLRWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLD 103
D + +WC ++Y+ +S+ A +I+ QLE L+ R +E+N D +
Sbjct: 583 LNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLERLMNRYNLELNTT--DYE 640
Query: 104 AIKF----SKLYAKDFFV 117
+ K+ K A FF+
Sbjct: 641 SPKYFDNIRKALASGFFM 658
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 100 (40.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 2 LSKTIIASDK--YKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHIT 59
L+K I+ S + + C E++ I AMLS+ N IF R K++ AD AR F + + DH+T
Sbjct: 798 LAKLILLSTQPEFHCSEEVVTIVAMLSVPN-IFNRPKERANEADMAREKFIISE-SDHLT 855
Query: 60 LL 61
LL
Sbjct: 856 LL 857
Score = 83 (34.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 55 GDHITLLRWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
G++ + WC +N++Q+KS+ RA+DI+ QL ++ + ++ + + D D K
Sbjct: 872 GNYTKINNWCNKNFLQLKSLYRAKDIKHQLMLIMKKNKLAILKSKTDDDIRK 923
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 127 (49.8 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 29/117 (24%), Positives = 60/117 (51%)
Query: 3 SKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLLR 62
+KTI+ S K+ C EI+ I ++LS+ +S+ + ++ R F + GDH+TLL
Sbjct: 507 AKTILMSPKFHCTEEILTIVSLLSV-DSVLHNPPSRREEVQGVRKKF-ISSEGDHMTLLN 564
Query: 63 -------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK 106
WC EN++ K+M +++ QL + ++ + + + D+++++
Sbjct: 565 IYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDICLKMSMPIASSRGDVESVR 621
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 127 (49.8 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 34/106 (32%), Positives = 57/106 (53%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF-HLGDVGDHITL 60
L+K +IAS + C E++ I AMLS+ F R + + AD ++M F H+ GDH+TL
Sbjct: 545 LAKMVIASCDFNCSNEVLSITAMLSVPQC-FVRPTEAKKAADESKMRFAHID--GDHLTL 601
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEI 93
L +WC +N+I +S+ A +++ QL ++ R +
Sbjct: 602 LNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNL 647
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 125 (49.1 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 33/118 (27%), Positives = 60/118 (50%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N +F +++ A F + + GDH+T+
Sbjct: 491 MFAKMLLESGNFGCSQEILSIAAMMQIQN-VFVFPSNQKSQATRVHRKFAVEE-GDHLTM 548
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAI 105
L +WC E+++ K + RA ++DQL+ LL + ++ + D D +
Sbjct: 549 LNVYEAFIKHNKSSQWCQEHFLNYKGLVRAATVRDQLKKLLVKFQVPKMSSEGDPDPV 606
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 124 (48.7 bits), Expect = 8.5e-07, P = 8.5e-07
Identities = 42/147 (28%), Positives = 72/147 (48%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M +K ++ S + C EI+ IAAM+ I N IF +++ A F + + GDH+T+
Sbjct: 483 MFAKMLLESGNFGCSQEILSIAAMMQIQN-IFVVPGNQKSQAIRVHRKFAVEE-GDHLTM 540
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIK- 106
L +WC E+++ K + RA +++QL+ LL + ++ + D D +
Sbjct: 541 LNVYEAFIKHNKNSQWCQEHFLNYKGLIRAATVREQLKKLLVKFQVPKKSSEGDPDPVLR 600
Query: 107 --FSKLYAKD--FFVYGNYSTRSLPHA 129
S +A F G YS R+L H+
Sbjct: 601 CIVSGFFANAARFHSTGAYS-RTLAHS 626
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 124 (48.7 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 31/123 (25%), Positives = 64/123 (52%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNF------HLGDV 54
ML+ +I S Y C EI+ I AMLS+ N +F R + AD A+++F HL +
Sbjct: 528 MLAVMLIGSPAYSCSEEILTIVAMLSVPN-VFVRPASARKRADEAKLSFAQADGDHLTLI 586
Query: 55 GDHITLL----------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDA 104
+ + +WC +N++ +S+ A+++++QL+ L+ + ++++ N +
Sbjct: 587 NVYEAFISPEASEIGTHKWCRDNFLSYRSLTSAKNVRNQLQRLMQKYDLQLISQYNQVSE 646
Query: 105 IKF 107
++
Sbjct: 647 FEY 649
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 123 (48.4 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 30/110 (27%), Positives = 62/110 (56%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M++K ++++ + CL EI+ IAAM+S+ +++ + + ++++R F + + GDH+T
Sbjct: 461 MMAKVLLSAQSFGCLSEILTIAAMVSLQGAVWVQHDGDKKSSESSRRKFAVEE-GDHLTY 519
Query: 61 L--------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVN 96
L +WC +N + +S+ RA ++ QL+ L R I+V+
Sbjct: 520 LNVYQAFVTKGKKESKWCRDNLLNYRSLLRAVSVRAQLKRYLERFGIQVD 569
>WB|WBGene00022433 [details] [associations]
symbol:Y108F1.5 species:6239 "Caenorhabditis elegans"
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000210
InterPro:IPR007502 InterPro:IPR013069 Pfam:PF00651 Pfam:PF04408
SMART:SM00225 SMART:SM00847 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0004386 eggNOG:COG1643 EMBL:FO080095
GeneTree:ENSGT00390000016595 RefSeq:NP_872264.1 UniGene:Cel.28964
ProteinModelPortal:Q8MXK2 SMR:Q8MXK2 STRING:Q8MXK2
EnsemblMetazoa:Y108F1.5 GeneID:353490 KEGG:cel:CELE_Y108F1.5
UCSC:Y108F1.5 CTD:353490 WormBase:Y108F1.5 InParanoid:Q8MXK2
NextBio:953851 Uniprot:Q8MXK2
Length = 330
Score = 120 (47.3 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 32/107 (29%), Positives = 56/107 (52%)
Query: 1 MLSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITL 60
M SK ++ S ++ C E++ I AM+ I +F ++ AD R F + + G+HIT+
Sbjct: 36 MHSKCLLKSAEFGCFTEMVTIVAMMQI-QDVFITPYRQRHQADVIRKKFAVEE-GNHITM 93
Query: 61 L-------------RWCCENYIQVKSMKRARDIQDQLEGLLTRVEIE 94
L +WC ++++ + + RA +++ QL LL R EIE
Sbjct: 94 LNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQLVRLLKRFEIE 140
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 115 (45.5 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 33/127 (25%), Positives = 63/127 (49%)
Query: 3 SKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLLR 62
SK ++ + + C+ EI+ + ++LS + +F +K A A F GDH+TLL
Sbjct: 498 SKLLLTASSFGCMEEILSLVSVLS-SDHVFVSNSEKNEMAALAHAKFQ-SKHGDHLTLLN 555
Query: 63 -------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIEVNCNLNDLDAIKFSK 109
WC +NY+ ++S+ AR+++ QL + + + +N + +D++ +K K
Sbjct: 556 VFNGFLKSEKPKMWCHDNYLNLRSLTYARNVRRQLREISEHLHLALNSS-DDIEMLK--K 612
Query: 110 LYAKDFF 116
FF
Sbjct: 613 CILNGFF 619
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 111 (44.1 bits), Expect = 0.00038, P = 0.00038
Identities = 40/158 (25%), Positives = 74/158 (46%)
Query: 2 LSKTIIASDKYKCLVEIIIIAAMLSIGNSIFYRLKDKQIHADNARMNFHLGDVGDHITLL 61
L+ +I S ++ C E++ + A+LS+ N +F R + AD R F D GDH+TLL
Sbjct: 508 LAVMLIRSPEFYCSNEVLSLTALLSVPN-VFVRPNSARKLADEMRQQFTHPD-GDHLTLL 565
Query: 62 R-------------WCCENYIQVKSMKRARDIQDQLEGLLTRVEIE-VNCNLNDLDA-IK 106
WC +++ +++ A +++ QL + R E+E ++ +D + +
Sbjct: 566 NVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELISTPFDDKNYYVN 625
Query: 107 FSKLYAKDFFVYGNYSTRSLPHALYV-LPHNTQLSLSP 143
+ FF+ + +S YV + N +SL P
Sbjct: 626 IRRALVSGFFM--QVAKKSANGKNYVTMKDNQVVSLHP 661
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.139 0.418 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 168 168 0.00079 108 3 11 22 0.48 31
31 0.46 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 108
No. of states in DFA: 577 (61 KB)
Total size of DFA: 147 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.18u 0.10s 17.28t Elapsed: 00:00:01
Total cpu time: 17.19u 0.10s 17.29t Elapsed: 00:00:01
Start: Fri May 10 16:18:48 2013 End: Fri May 10 16:18:49 2013
WARNINGS ISSUED: 1