BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>035961
MPEKVALSSSPKKWVLSGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVWNLKQDR
FVAVRANATVDAAQIQLNLTVNTSSVQDLPTQREKPQLNDVKNFTSNDSPSLNLTHLNQT
SVASSISKNSSKVAQQNPLQQKPSGALPNRSESPVLESLKWVSVDLEPNLSTNLLARWLA
PGGEPCRDSRTVEIAIHGLDGGKLMELSAGDIHEFSLSSIGCVGGDYFETDLSGESWKSR
PVVKDFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFF
RSKAQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGS
LGSIESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIK
AVPRRFDLNFSNPKDPSQSVRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDTV
PDTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGG
YARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLK
MKWRDGQIGHQYFVDLMLVHVLLNALCAQS

High Scoring Gene Products

Symbol, full name Information P value
AT3G06150 protein from Arabidopsis thaliana 1.6e-208
AT5G19060 protein from Arabidopsis thaliana 2.4e-201

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  035961
        (630 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2082455 - symbol:AT3G06150 "AT3G06150" species...  1902  1.6e-208  2
TAIR|locus:2179644 - symbol:AT5G19060 "AT5G19060" species...  1832  2.4e-201  2


>TAIR|locus:2082455 [details] [associations]
            symbol:AT3G06150 "AT3G06150" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002686
            GenomeReviews:BA000014_GR EMBL:AC018907 HSSP:P13466
            eggNOG:NOG257663 HOGENOM:HOG000029562 ProtClustDB:CLSN2684639
            IPI:IPI00538659 RefSeq:NP_187266.1 UniGene:At.40563 PaxDb:Q9M8K3
            PRIDE:Q9M8K3 EnsemblPlants:AT3G06150.1 GeneID:819789
            KEGG:ath:AT3G06150 TAIR:At3g06150 InParanoid:Q9M8K3 OMA:KMEAFNG
            PhylomeDB:Q9M8K3 Genevestigator:Q9M8K3 Uniprot:Q9M8K3
        Length = 594

 Score = 1902 (674.6 bits), Expect = 1.6e-208, Sum P(2) = 1.6e-208
 Identities = 332/508 (65%), Positives = 417/508 (82%)

Query:   135 QQN-PLQQKPSGALP---NRSESPVLESLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSR 190
             +QN  L   P   +P   N + +      +W++   + N + NL+  WLAPGG PCR+++
Sbjct:    87 RQNLTLMMAPRNLVPKKTNLTSNSTRVQFEWITAGSQKNFTANLMRGWLAPGGAPCREAK 146

Query:   191 TVEIAIHGLDGGKLMELSAGDIHEFSLSSIG------CVGGDYFETDLSGESWKSRPVVK 244
             TVEI++ G+DG   +EL+AG+IHEF   +I       C+GGDYFETD+SGE+WKSRP VK
Sbjct:   147 TVEISVPGVDGIDSVELTAGEIHEFKFQAIDESGKNVCIGGDYFETDISGENWKSRPPVK 206

Query:   245 DFGNGTYSLSLQVHPDFVGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFFRSK- 303
             DFGNGTYS SLQVHP+F GD+NLTVILLFRH++GLKFS  R  +DR+LR++ +RF ++  
Sbjct:   207 DFGNGTYSFSLQVHPEFAGDFNLTVILLFRHYQGLKFSTSRLGFDRKLRNVRLRFVKTPD 266

Query:   304 AQLPEIKVCQKSDFNRDIWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGSLGS 363
               LPE++ C+KSDFNRD WSGRWTR GKND+CQI+ DGRYRCLA DFPCR PWC G++G+
Sbjct:   267 VTLPELRSCKKSDFNRDAWSGRWTRLGKNDECQISNDGRYRCLAADFPCRKPWCDGAVGA 326

Query:   364 IESNGWVYSSHCSFRMFSADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVP 423
             IESNGWVYSSHCSF++FSA+ AW+CLK +WIFFWGDSNHVD+IRN+LNFVL  P+I AVP
Sbjct:   327 IESNGWVYSSHCSFKLFSAEKAWDCLKGKWIFFWGDSNHVDSIRNLLNFVLGHPEIPAVP 386

Query:   424 RRFDLNFSNPKDPSQSVRITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDT--VP 481
             RRFD+ FSNPK+PS++VRITSIFNGHWN+T NYQGLDSLKD  FR L+KKYF+E+T  VP
Sbjct:   387 RRFDMKFSNPKNPSETVRITSIFNGHWNETKNYQGLDSLKDRDFRELLKKYFNEETNRVP 446

Query:   482 DTVIMNSGLHDGVHFSNIRAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGGY 541
             D +I+NSGLHDG+H++++RAF K A +AA+FW+EV + ++ RGL  P++ +R T+ATGGY
Sbjct:   447 DVMIVNSGLHDGIHWTSLRAFAKGAETAAAFWREVFDGVKSRGLQPPEVIFRNTIATGGY 506

Query:   542 ARSLAFNPSKMEAFNGVLLDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKM 601
             AR LAFNPSKMEAFNGV L+K+R AG+V+ V+DNFDMT+PWH+DNRCNDGVHYGRAP KM
Sbjct:   507 ARMLAFNPSKMEAFNGVFLEKMRDAGLVTSVVDNFDMTYPWHYDNRCNDGVHYGRAPAKM 566

Query:   602 KWRDGQIGHQYFVDLMLVHVLLNALCAQ 629
             +WRDG+IGHQYFVDLMLVHVLLNALC +
Sbjct:   567 RWRDGEIGHQYFVDLMLVHVLLNALCVR 594

 Score = 137 (53.3 bits), Expect = 1.6e-208, Sum P(2) = 1.6e-208
 Identities = 29/57 (50%), Positives = 37/57 (64%)

Query:     1 MPEK-VALSSSPKKWVL--SGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVW 54
             MPEK +     P + V+    P+ QWR G LTALV   ++VVWSIDGC+I +FVQ W
Sbjct:     1 MPEKGMIFPPVPSQLVILRPSPLLQWRLGALTALVCFLMLVVWSIDGCSIQSFVQPW 57


>TAIR|locus:2179644 [details] [associations]
            symbol:AT5G19060 "AT5G19060" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0009507 "chloroplast"
            evidence=ISM] EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AY735683
            EMBL:DQ446967 IPI:IPI00525520 RefSeq:NP_197407.1 UniGene:At.51061
            ProteinModelPortal:Q5XV39 SMR:Q5XV39 EnsemblPlants:AT5G19060.1
            GeneID:832025 KEGG:ath:AT5G19060 TAIR:At5g19060 eggNOG:NOG257663
            HOGENOM:HOG000029562 InParanoid:Q5XV39 OMA:NDECEIS PhylomeDB:Q5XV39
            ProtClustDB:CLSN2684639 Genevestigator:Q5XV39 Uniprot:Q5XV39
        Length = 551

 Score = 1832 (650.0 bits), Expect = 2.4e-201, Sum P(2) = 2.4e-201
 Identities = 320/488 (65%), Positives = 399/488 (81%)

Query:   148 PNRSESPVLESLKWVSVDLEPNLSTNLLARWLAPGGEPCRDSRTVEIAIHGLDGGKLMEL 207
             P+    P    L W+SV+ E N + N+L  WLAPGGE CR++ TVEI++ G++G  L+EL
Sbjct:    62 PSLDLDPTRVKLAWISVEQEQNFTANVLKNWLAPGGEKCREANTVEISVPGIEGKGLVEL 121

Query:   208 SAGDIHEF---SLSSIG---CVGGDYFETDLSGESWKSRPVVKDFGNGTYSLSLQVHPDF 261
             +AG+IHEF   SL   G   C+GGDYFETDLSGE+WKSRP VKD GNGTYSLSLQ+HPDF
Sbjct:   122 TAGEIHEFRFHSLDDSGERVCIGGDYFETDLSGENWKSRPPVKDLGNGTYSLSLQIHPDF 181

Query:   262 VGDYNLTVILLFRHFEGLKFSPVRFVYDRELRHIPIRFFRSK-AQLPEIKVCQKSDFNRD 320
              GDY+LTV+LLFR F+GLK SP RF ++R LR+  +RF +     LPE++ C+ SDF+RD
Sbjct:   182 AGDYDLTVVLLFRRFQGLKLSPARFAFNRTLRNFKLRFIKKPHVVLPELRRCELSDFDRD 241

Query:   321 IWSGRWTRHGKNDDCQINADGRYRCLAWDFPCRNPWCYGSLGSIESNGWVYSSHCSFRMF 380
             +WSGRW R GKND+C+I+ DGRYRCL   + CR PWC G+L ++ESNGWVYSSHCSF++F
Sbjct:   242 VWSGRWIRLGKNDECEISNDGRYRCLPDGYRCREPWCDGALSALESNGWVYSSHCSFKLF 301

Query:   381 SADSAWNCLKNRWIFFWGDSNHVDTIRNMLNFVLDLPDIKAVPRRFDLNFSNPKDPSQSV 440
             S++SAW+CLKN+WIFFWGDSNHVD+IRN+LNFVL  P+I AVPRRFDL FSNPK+ S++V
Sbjct:   302 SSESAWDCLKNKWIFFWGDSNHVDSIRNLLNFVLGHPEIGAVPRRFDLKFSNPKNSSETV 361

Query:   441 RITSIFNGHWNDTLNYQGLDSLKDEGFRNLVKKYFSEDT-VPDTVIMNSGLHDGVHFSNI 499
             RITSIFNGHWN+T NY GLDSL+D+ FR L+K YF E+T VPD +I+NSGLHDG+H+SN+
Sbjct:   362 RITSIFNGHWNETQNYLGLDSLEDDSFRELLKSYFVEETGVPDVMIVNSGLHDGIHWSNL 421

Query:   500 RAFIKSANSAASFWKEVMESIRRRGLVVPQIFYRTTVATGGYARSLAFNPSKMEAFNGVL 559
             RAF K A +AA+FW+ V +S++ RGL  P++ +R T+ATGGYAR LAFNPSKME +NGV 
Sbjct:   422 RAFTKGAETAAAFWRNVFDSVKARGLRPPKVIFRNTIATGGYARKLAFNPSKMEVYNGVF 481

Query:   560 LDKLRQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIGHQYFVDLMLV 619
             L+K++  G+VS VIDNFDMT+PWHFDNRCNDGVHYGR P K++W DG+IGHQYFVDLMLV
Sbjct:   482 LEKMKGLGLVSSVIDNFDMTYPWHFDNRCNDGVHYGRPPAKVRWIDGEIGHQYFVDLMLV 541

Query:   620 HVLLNALC 627
             HVLLNA+C
Sbjct:   542 HVLLNAVC 549

 Score = 139 (54.0 bits), Expect = 2.4e-201, Sum P(2) = 2.4e-201
 Identities = 26/54 (48%), Positives = 36/54 (66%)

Query:     1 MPEKVALSSSPKKWVLSGPMHQWRFGVLTALVFMGVVVVWSIDGCTIDNFVQVW 54
             MP+KV + S     +   P+HQWR   LT+LVF  +VVVWSID C+I +F++ W
Sbjct:     1 MPKKVVIPS-----LAMSPLHQWRLSALTSLVFFLIVVVWSIDSCSIRSFIKSW 49


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.137   0.438    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      630       616   0.00088  120 3  11 22  0.37    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  636 (68 KB)
  Total size of DFA:  402 KB (2192 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  47.24u 0.11s 47.35t   Elapsed:  00:00:03
  Total cpu time:  47.24u 0.11s 47.35t   Elapsed:  00:00:03
  Start:  Fri May 10 16:30:09 2013   End:  Fri May 10 16:30:12 2013

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