BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 035963
(360 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PA2|A Chain A, Arabidopsis Thaliana Peroxidase A2
pdb|1QO4|A Chain A, Arabidopsis Thaliana Peroxidase A2 At Room Temperature
Length = 306
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 123/295 (41%), Positives = 169/295 (57%), Gaps = 9/295 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVS-- 128
TCP+ I+ +Q ++ D ASLIRLHFHDC V GCDASI+L GS + K +
Sbjct: 11 TCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGP 70
Query: 129 --KTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ RGF ++D IK +E CP VSC+D+L A+ + +AGGP W V GR+D +
Sbjct: 71 NVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTA 130
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGT 246
+ AN +P E+++ + F GLN DLV LSGAHT GR+ C N+RL NF+GT
Sbjct: 131 NLAGANSSIPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARCGVFNNRLFNFSGT 190
Query: 247 RKADPSLDTKYLNSLKKKCA--ASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLL 304
DP+L++ L++L++ C S+ +LD +TP FD Y+ NL N GLL +DQ L
Sbjct: 191 GNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQEL 250
Query: 305 --NSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
+ + T V+ AS +F FA SM+ +GNI L N GEIR C VN
Sbjct: 251 FSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSN-GEIRLDCKKVN 304
>pdb|1QGJ|A Chain A, Arabidopsis Thaliana Peroxidase N
pdb|1QGJ|B Chain B, Arabidopsis Thaliana Peroxidase N
Length = 300
Score = 227 bits (579), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 125/294 (42%), Positives = 171/294 (58%), Gaps = 11/294 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVS-K 129
+CP+L I+ +QV ++ + AASLIRLHFHDC V GCDAS++L SE+ A +
Sbjct: 10 SCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADSEKLAIPNIN 69
Query: 130 TLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAR 189
+ RGF +ID IKA VE CP VSCADILT AARD+ V++GGP W V GRKDG +++
Sbjct: 70 SARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQN 129
Query: 190 EANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKA 249
AN L P E + +I F LNI D+V LSGAHT G++ C ++RL NF G
Sbjct: 130 SANNL-PSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGAGNP 188
Query: 250 DPSLDTKYLNSLKKKC--AASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSD 307
D +L+T L++L+ C +S++ LD +T FD Y+ NL GLLS+DQ+L S
Sbjct: 189 DATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLLEGKGLLSSDQILFSS 248
Query: 308 ----ARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
T V + +F F +M+++GNI A GE+R C +N
Sbjct: 249 DLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNISNGA---SGEVRTNCRVIN 299
>pdb|1GWO|A Chain A, Recombinant Horseradish Peroxidase C1a Ala170gln
Length = 309
Score = 227 bits (579), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 126/297 (42%), Positives = 170/297 (57%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHFHDC V GCDASI+L + S R K
Sbjct: 11 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFG 70
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 71 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 130
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +PQ + L FR+ GLN DLV LSG HT G++ C I RL+NF+
Sbjct: 131 FLDLANANLPQPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSN 190
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 191 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 250
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 251 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 306
>pdb|1GX2|A Chain A, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
pdb|1GX2|B Chain B, Recombinant Horseradish Peroxidase Phe209ser Complex With
Benzhydroxamic Acid
Length = 309
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 170/297 (57%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHFHDC V GCDASI+L + S R K
Sbjct: 11 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFG 70
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 71 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 130
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV LSG HT G++ C +I RL+NF+
Sbjct: 131 FLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRSIMDRLYNFSN 190
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 191 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 250
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 251 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 306
>pdb|3ATJ|A Chain A, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|3ATJ|B Chain B, Heme Ligand Mutant Of Recombinant Horseradish Peroxidase
In Complex With Benzhydroxamic Acid
pdb|1GWT|A Chain A, Recombinant Horseradish Peroxidase C1a Phe221met
Length = 309
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 170/297 (57%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHFHDC V GCDASI+L + S R K
Sbjct: 11 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFG 70
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 71 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 130
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV LSG HT G++ C I RL+NF+
Sbjct: 131 FLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSN 190
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD+D TP IFD YY NL GL+ +DQ
Sbjct: 191 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDMDLRTPTIFDNKYYVNLEEQKGLIQSDQE 250
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 251 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 306
>pdb|1FHF|A Chain A, The Structure Of Soybean Peroxidase
pdb|1FHF|B Chain B, The Structure Of Soybean Peroxidase
pdb|1FHF|C Chain C, The Structure Of Soybean Peroxidase
Length = 304
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/295 (44%), Positives = 178/295 (60%), Gaps = 9/295 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKG---SERRAKV 127
TCP+L I+ + D ASL+RLHFHDC V+GCD S++L++ SE+ A
Sbjct: 10 TCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQGCDGSVLLNNTDTIESEQDALP 69
Query: 128 S-KTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ ++RG ++++IK VE CP TVSCADIL AA A+V+ GGP W VP GR+D +
Sbjct: 70 NINSIRGLDVVNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTA 129
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGT 246
+ AN+ +P N+T L F GLN LDLV LSG HT GR+ C +RL+NF+ T
Sbjct: 130 NRTLANQNLPAPFFNLTQLKASFAVQGLNTLDLVTLSGGHTFGRARCSTFINRLYNFSNT 189
Query: 247 RKADPSLDTKYLNSLKKKCA--ASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLL 304
DP+L+T YL L+ +C A+ +LD +TP FD YY+NL + GLL +DQ L
Sbjct: 190 GNPDPTLNTTYLEVLRARCPQNATGDNLTNLDLSTPDQFDNRYYSNLLQLNGLLQSDQEL 249
Query: 305 NS--DARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
S A T P V+ +S F S F SM+K+GNIGVL +EGEIR +C+ VN
Sbjct: 250 FSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTG-DEGEIRLQCNFVN 303
>pdb|1W4W|A Chain A, Ferric Horseradish Peroxidase C1a In Complex With Formate
pdb|1W4Y|A Chain A, Ferrous Horseradish Peroxidase C1a In Complex With Carbon
Monoxide
Length = 323
Score = 224 bits (572), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 169/297 (56%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHFHDC V GCDASI+L + S R K
Sbjct: 10 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFG 69
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 70 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 129
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV LSG HT G++ C I RL+NF+
Sbjct: 130 FLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSN 189
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 190 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 249
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 250 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 305
>pdb|1ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|B Chain B, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|C Chain C, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|D Chain D, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|E Chain E, Recombinant Horseradish Peroxidase C1a
pdb|1ATJ|F Chain F, Recombinant Horseradish Peroxidase C1a
pdb|1HCH|A Chain A, Structure Of Horseradish Peroxidase C1a Compound I
Length = 306
Score = 224 bits (571), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 169/297 (56%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHFHDC V GCDASI+L + S R K
Sbjct: 10 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFG 69
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 70 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 129
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV LSG HT G++ C I RL+NF+
Sbjct: 130 FLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSN 189
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 190 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 249
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 250 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 305
>pdb|2ATJ|A Chain A, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
pdb|2ATJ|B Chain B, Recombinant Horseradish Peroxidase Complex With
Benzhydroxamic Acid
Length = 308
Score = 224 bits (571), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 169/297 (56%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHFHDC V GCDASI+L + S R K
Sbjct: 11 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFG 70
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 71 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 130
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV LSG HT G++ C I RL+NF+
Sbjct: 131 FLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSN 190
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 191 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 250
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 251 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 306
>pdb|6ATJ|A Chain A, Recombinant Horseradish Peroxidase C Complex With Ferulic
Acid
pdb|7ATJ|A Chain A, Recombinant Horseradish Peroxidase C1a Complex With
Cyanide And Ferulic Acid
pdb|1H5D|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-11% Dose)
pdb|1H5E|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (11-22% Dose)
pdb|1H5F|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (22-33% Dose)
pdb|1H5G|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (33-44% Dose)
pdb|1H5I|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (56-67% Dose)
pdb|1H5J|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (67-78% Dose)
pdb|1H5K|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (78-89% Dose)
pdb|1H5M|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (0-100% Dose)
pdb|1H55|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Ii
pdb|1H57|A Chain A, Structure Of Horseradish Peroxidase C1a Compound Iii
pdb|1H58|A Chain A, Structure Of Ferrous Horseradish Peroxidase C1a
pdb|1H5A|A Chain A, Structure Of Ferric Horseradish Peroxidase C1a In Complex
With Acetate
pdb|1H5C|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (100-200% Dose)
pdb|1H5H|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (44-56% Dose)
pdb|1H5L|A Chain A, X-Ray Induced Reduction Of Horseradish Peroxidase C1a
Compound Iii (89-100% Dose)
Length = 308
Score = 224 bits (571), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 169/297 (56%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHFHDC V GCDASI+L + S R K
Sbjct: 10 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFG 69
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 70 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 129
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV LSG HT G++ C I RL+NF+
Sbjct: 130 FLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSN 189
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 190 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 249
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 250 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 305
>pdb|1GWU|A Chain A, Recombinant Horseradish Peroxidase C1a Ala140gly
Length = 309
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 169/297 (56%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHFHDC V GCDASI+L + S R K
Sbjct: 11 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFG 70
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 71 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 130
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV LSG HT G++ C I RL+NF+
Sbjct: 131 FLDLANANLPGPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSN 190
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 191 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 250
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 251 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 306
>pdb|1GW2|A Chain A, Recombinant Horseradish Peroxidase C1a Thr171ser In
Complex With Ferulic Acid
Length = 308
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 169/297 (56%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHFHDC V GCDASI+L + S R K
Sbjct: 10 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFG 69
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 70 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 129
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV LSG H+ G++ C I RL+NF+
Sbjct: 130 FLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHSFGKNQCRFIMDRLYNFSN 189
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 190 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 249
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 250 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 305
>pdb|2YLJ|A Chain A, Horse Radish Peroxidase, Mutant S167y
Length = 306
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 168/297 (56%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHFHDC V GCDASI+L + S R K
Sbjct: 10 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFG 69
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 70 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 129
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV L G HT G++ C I RL+NF+
Sbjct: 130 FLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALYGGHTFGKNQCRFIMDRLYNFSN 189
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 190 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 249
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 250 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 305
>pdb|4ATJ|A Chain A, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
pdb|4ATJ|B Chain B, Distal Heme Pocket Mutant (H42e) Of Recombinant
Horseradish Peroxidase In Complex With Benzhydroxamic
Acid
Length = 309
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/297 (41%), Positives = 168/297 (56%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++RLHF DC V GCDASI+L + S R K
Sbjct: 11 SCPNVSNIVRDTIVNELRSDPRIAASILRLHFEDCFVNGCDASILLDNTTSFRTEKDAFG 70
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 71 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 130
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV LSG HT G++ C I RL+NF+
Sbjct: 131 FLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSN 190
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 191 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 250
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 251 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 306
>pdb|3HDL|A Chain A, Crystal Structure Of Highly Glycosylated Peroxidase From
Royal Palm Tree
Length = 304
Score = 221 bits (564), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 124/295 (42%), Positives = 173/295 (58%), Gaps = 9/295 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIML---SHKGSERRA-K 126
+CP E ++ + V A + A LIR+HFHDC VRGCDAS++L ++ +E+ A
Sbjct: 10 SCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVRGCDASVLLDSTANNTAEKDAIP 69
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ +LRGF +I K+ VE CP+TVSCADIL AARD+ +AG ++VP GR+DG +S
Sbjct: 70 NNPSLRGFEVITAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVS 129
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGT 246
A EAN +P N T LI F + L ++V LSGAH+IG + C + +RL+NFN
Sbjct: 130 LASEANAQIPSPLFNATQLINSFANKTLTADEMVTLSGAHSIGVAHCSSFTNRLYNFNSG 189
Query: 247 RKADPSLDTKYLNSLKKKCAASSH----VYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQ 302
DP+L Y L+ C A+S + V LD TP + D YYT + +GLL++DQ
Sbjct: 190 SGIDPTLSPSYAALLRNTCPANSTRFTPITVSLDIITPSVLDNMYYTGVQLTLGLLTSDQ 249
Query: 303 LLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L ++A V A ++S+FA +MVK+G I VL +GEIR CS VN
Sbjct: 250 ALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTG-TQGEIRTNCSVVN 303
>pdb|1KZM|A Chain A, Distal Heme Pocket Mutant (r38s/h42e) Of Recombinant
Horseradish Peroxidase C (hrp C)
Length = 308
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 123/297 (41%), Positives = 167/297 (56%), Gaps = 11/297 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK---- 126
+CP++ I+ + +R D AAS++ LHF DC V GCDASI+L + S R K
Sbjct: 10 SCPNVSNIVRDTIVNELRSDPRIAASILSLHFEDCFVNGCDASILLDNTTSFRTEKDAFG 69
Query: 127 VSKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF +ID +KA VE CP+TVSCAD+LT AA+ + +AGGP W VP GR+D +
Sbjct: 70 NANSARGFPVIDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQA 129
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLN-ILDLVVLSGAHTIGRSSCDAINHRLHNFNG 245
AN +P + L FR+ GLN DLV LSG HT G++ C I RL+NF+
Sbjct: 130 FLDLANANLPAPFFTLPQLKDSFRNVGLNRSSDLVALSGGHTFGKNQCRFIMDRLYNFSN 189
Query: 246 TRKADPSLDTKYLNSLKKKCAASSHV--YVDLDATTPRIFDTAYYTNLGRNMGLLSTDQL 303
T DP+L+T YL +L+ C + ++ VD D TP IFD YY NL GL+ +DQ
Sbjct: 190 TGLPDPTLNTTYLQTLRGLCPLNGNLSALVDFDLRTPTIFDNKYYVNLEEQKGLIQSDQE 249
Query: 304 LNSDAR---TGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L S T P V A+ F + F +M ++GNI L +G+IR C VN
Sbjct: 250 LFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTG-TQGQIRLNCRVVN 305
>pdb|4A5G|A Chain A, Raphanus Sativus Anionic Peroxidase.
pdb|4A5G|B Chain B, Raphanus Sativus Anionic Peroxidase
Length = 308
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 119/295 (40%), Positives = 167/295 (56%), Gaps = 9/295 (3%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGS---ERRAKV 127
TCP+ ++ VQ + D ASLIRLHFHDC V GCDASI+L + GS E+ A
Sbjct: 12 TCPNASAMVRTIVQQAFQSDSRIGASLIRLHFHDCFVLGCDASILLDNSGSIISEKNAGP 71
Query: 128 -SKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKIS 186
+ + RGF ++D IK +E CP VSC D+L A++ + ++GGP W V GR+D +
Sbjct: 72 NANSARGFNVVDNIKTALENACPGVVSCTDVLALASQASVSLSGGPSWTVDLGRRDTLTA 131
Query: 187 SAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGT 246
+ AN +P + ++ + F GLN DLV LSGAHT GR++C ++RL NF+G
Sbjct: 132 NQAGANSSIPSPTQGLSNITSKFSAVGLNTNDLVALSGAHTFGRATCGVFSNRLFNFSGK 191
Query: 247 RKADPSLDTKYLNSLKKKCA--ASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLL 304
DP+L+T L++L++ C +LD +TP FD Y+TNL N GLL +DQ L
Sbjct: 192 GNPDPTLNTTLLSTLQELCPQKGRGSGSTNLDLSTPDAFDNNYFTNLQSNNGLLQSDQEL 251
Query: 305 --NSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
+ + T V+ AS +F FA SM+ +GNI L + GEIR C N
Sbjct: 252 FSTTGSATIAIVTSFASNQTLFFQAFAQSMINMGNISPLTG-SSGEIRLDCKKTN 305
>pdb|1SCH|A Chain A, Peanut Peroxidase
pdb|1SCH|B Chain B, Peanut Peroxidase
Length = 294
Score = 207 bits (528), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 157/292 (53%), Gaps = 14/292 (4%)
Query: 72 CPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIML----SHKGSERRAKV 127
CP+ I V + + K+ ASL+RLHFHDC V+GCDAS++L + G +
Sbjct: 11 CPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPN 70
Query: 128 SKTLRGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISS 187
+ ++RGF +ID IK++VE CP VSCADIL AARD+ V GG W V GR+D +S
Sbjct: 71 ANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTAS 130
Query: 188 AREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTR 247
AN +P N++ LI F + G +LV LSGAHTIG++ C A R++N
Sbjct: 131 LSSANSDLPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTAFRTRIYN----- 185
Query: 248 KADPSLDTKYLNSLKKKCAA--SSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLN 305
+ ++D Y SL+ C + D TTP FD AYY NL GLL +DQ L
Sbjct: 186 --ESNIDPTYAKSLQANCPSVGGDTNLSPFDVTTPNKFDNAYYINLRNKKGLLHSDQQLF 243
Query: 306 SDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
+ T V+ ++ F++ F +M+K+GN+ L G+IR C N
Sbjct: 244 NGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTG-TSGQIRTNCRKTN 294
>pdb|1BGP|A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
Length = 309
Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 114/295 (38%), Positives = 167/295 (56%), Gaps = 14/295 (4%)
Query: 71 TCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGS---ERRAKV 127
TCP E I+ VQ +RKD AA L+RLHFHDC V+GCDAS++L + E++A
Sbjct: 17 TCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQGCDASVLLDGSATGPGEQQAPP 76
Query: 128 SKTLR--GFRIIDEIKAEVEKKC-PKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGK 184
+ TLR F+ +++I+ +E++C VSC+DIL AARD+ VV+GGP + VP GR+D +
Sbjct: 77 NLTLRPSAFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDYRVPLGRRDSR 136
Query: 185 -ISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNF 243
+S ++ +P NV +L+ + GL+ DLV +SG HTIG + C + RL
Sbjct: 137 SFASTQDVLSDLPGPSSNVQSLLALLGRLGLDATDLVTISGGHTIGLAHCSSFEDRLFP- 195
Query: 244 NGTRKADPSLDTKYLNSLKKKCAA-SSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQ 302
+ DP++ +L+ LK+ C A + LD TP +FD YY +L GL +DQ
Sbjct: 196 ----RPDPTISPTFLSRLKRTCPAKGTDRRTVLDVRTPNVFDNKYYIDLVNREGLFVSDQ 251
Query: 303 LLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357
L ++A T P V A F QF S+ K+G + V ++GE+R CS N
Sbjct: 252 DLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTS-DQGEVRRNCSVRN 305
>pdb|1IYN|A Chain A, Crystal Structure Of Chloroplastic Ascorbate Peroxidase
From Tobacco Plants And Structural Insights For Its
Instability
Length = 295
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 81/202 (40%), Gaps = 24/202 (11%)
Query: 152 VSCADILTAAARDATVVAGGPFWEVPFGRKD-GKISSAREANRLVPQGHENVTT-LIQIF 209
V+ AD+ A+ A AGGP + +GR D + E RL G + L +F
Sbjct: 87 VTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDVF 146
Query: 210 RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASS 269
GLN ++V LSGAHT+GRS D R +TKY S
Sbjct: 147 YRMGLNDKEIVALSGAHTLGRSRPD------------RSGWGKPETKYTKDGPGAPGGQS 194
Query: 270 HVYVDLDATTPRIFDTAYYTNL----GRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFS 325
L FD +Y+ ++ ++ +L TD L D + A+ P F
Sbjct: 195 WTAQWLK------FDNSYFKDIKERRDEDLLVLPTDAALFEDPSFKVYAEKYAADPEAFF 248
Query: 326 SQFAASMVKLGNIGVLARPNEG 347
+A + KL N+G P EG
Sbjct: 249 KDYAEAHAKLSNLGAKFGPAEG 270
>pdb|3RIW|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
pdb|3RIW|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Mutant C197t
Length = 271
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 105/273 (38%), Gaps = 33/273 (12%)
Query: 74 DLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK--VSKTL 131
D+E +I +++ SLIRL +H+ C + S R +
Sbjct: 15 DIEDMISEKLE--------LGPSLIRLAWHEAASYDCFKKDGSPNSASMRFKPECLYAGN 66
Query: 132 RGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREA 191
+G I + ++KK P+ +S AD+ AA A GGP +GR D K S
Sbjct: 67 KGLDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGP 125
Query: 192 NRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHR---LHNFNGTRK 248
+ +P G + + + ++FR G N + V L GAHT G + + + H+ NG
Sbjct: 126 DGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGETHIEFSGYHGPWTHDKNG--- 182
Query: 249 ADPSLDTKYLNSLKKKCAASSHVYVDLDAT-TPRIFDTAYYTNLGRNMGLLSTDQLLNSD 307
D + L +D D P++ + +L +D L D
Sbjct: 183 ----FDNSFFTQL-----------LDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLD 227
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIGV 340
+V + A F+ FA + KL +G
Sbjct: 228 PSYRKYVELYAKDNDRFNKDFANAFKKLTELGT 260
>pdb|2CL4|X Chain X, Ascorbate Peroxidase R172a Mutant
Length = 261
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 90 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 141
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 142 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKEASGFEGPW---- 190
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGL--LSTDQLLNSD 307
+ P IFD +Y+T L G GL L +D+ L SD
Sbjct: 191 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 225
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 226 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|1APX|A Chain A, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|B Chain B, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|C Chain C, Crystal Structure Of Recombinant Ascorbate Peroxidase
pdb|1APX|D Chain D, Crystal Structure Of Recombinant Ascorbate Peroxidase
Length = 249
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 87/212 (41%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ IK + VS AD A A + GGP EVPF GR+D K E
Sbjct: 78 RLLEPIKEQF-----PIVSYADFYQLAGVVAVEITGGP--EVPFHPGRED-KPEPPPEGR 129
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL+ D+V LSG HTIG A + F G
Sbjct: 130 --LPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 178
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGLLS--TDQLLNSD 307
+ P IFD +Y+T L G GLL +D+ L +D
Sbjct: 179 -------------------------TSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTD 213
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
+ P V A+ VF + +A + +KL +G
Sbjct: 214 SVFRPLVEKYAADEDVFFADYAEAHLKLSELG 245
>pdb|3RIV|A Chain A, The Crystal Structure Of Leishmania Major Peroxidase
pdb|3RIV|B Chain B, The Crystal Structure Of Leishmania Major Peroxidase
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 33/273 (12%)
Query: 74 DLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK--VSKTL 131
D+E +I +++ SLIRL +H+ C + S R +
Sbjct: 15 DIEDMISEKLE--------LGPSLIRLAWHEAASYDCFKKDGSPNSASMRFKPECLYAGN 66
Query: 132 RGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREA 191
+G I + ++KK P+ +S AD+ AA A GGP +GR D K S
Sbjct: 67 KGLDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGP 125
Query: 192 NRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHR---LHNFNGTRK 248
+ +P G + + + ++FR G N + V L GAHT G + + H+ NG
Sbjct: 126 DGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGPWTHDKNG--- 182
Query: 249 ADPSLDTKYLNSLKKKCAASSHVYVDLDAT-TPRIFDTAYYTNLGRNMGLLSTDQLLNSD 307
D + L +D D P++ + +L +D L D
Sbjct: 183 ----FDNSFFTQL-----------LDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLD 227
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIGV 340
+V + A F+ FA + KL +G
Sbjct: 228 PSYRKYVELYAKDNDRFNKDFANAFKKLTELGT 260
>pdb|2VCF|X Chain X, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase
Length = 264
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 90 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 141
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 142 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 190
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGLLS--TDQLLNSD 307
+ P IFD +Y+T L G GLL +D+ L SD
Sbjct: 191 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 225
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 226 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|2VCS|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant H42a
Length = 261
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 90 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 141
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 142 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 190
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGLLS--TDQLLNSD 307
+ P IFD +Y+T L G GLL +D+ L SD
Sbjct: 191 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 225
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 226 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|2Y6B|A Chain A, Ascorbate Peroxidase R38k Mutant
Length = 249
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 78 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 129
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 130 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 178
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGL--LSTDQLLNSD 307
+ P IFD +Y+T L G GL L +D+ L SD
Sbjct: 179 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 213
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 214 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 245
>pdb|4GED|A Chain A, Crystal Structure Of The Leishmania Major
Peroxidase-Cytochrome C Complex
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 104/273 (38%), Gaps = 33/273 (12%)
Query: 74 DLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAK--VSKTL 131
D+E +I +++ SLIRL +H+ C + S R +
Sbjct: 14 DIEDMISEKLE--------LGPSLIRLAWHEAASYDCFKKDGSPNSASMRFKPECLYAGN 65
Query: 132 RGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREA 191
+G I + ++KK P+ +S AD+ AA A GGP +GR D K S
Sbjct: 66 KGLDIPRKALETLKKKYPQ-ISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGP 124
Query: 192 NRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHR---LHNFNGTRK 248
+ +P G + + + ++FR G N + V L GAHT G + + H+ NG
Sbjct: 125 DGRLPDGSKTQSHVREVFRRLGFNDQETVALIGAHTCGECHIEFSGYHGPWTHDKNG--- 181
Query: 249 ADPSLDTKYLNSLKKKCAASSHVYVDLDAT-TPRIFDTAYYTNLGRNMGLLSTDQLLNSD 307
D + L +D D P++ + +L +D L D
Sbjct: 182 ----FDNSFFTQL-----------LDEDWVLNPKVEQMQLMDRATTKLMMLPSDVCLLLD 226
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIGV 340
+V + A F+ FA + KL +G
Sbjct: 227 PSYRKYVELYAKDNDRFNKDFANAFKKLTELGT 259
>pdb|2XIF|A Chain A, The Structure Of Ascorbate Peroxidase Compound Ii
pdb|2XIH|A Chain A, The Structure Of Ascorbate Peroxidase Compound Iii
pdb|2XI6|A Chain A, The Structure Of Ascorbate Peroxidase Compound I
pdb|2XJ6|A Chain A, The Structure Of Ferrous Ascorbate Peroxidase
Length = 249
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 78 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 129
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 130 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 178
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGL--LSTDQLLNSD 307
+ P IFD +Y+T L G GL L +D+ L SD
Sbjct: 179 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 213
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 214 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 245
>pdb|1OAF|A Chain A, Ascobate Peroxidase From Soybean Cytosol In Complex With
Ascorbate
pdb|1OAG|A Chain A, Ascorbate Peroxidase From Soybean Cytosol
pdb|1V0H|X Chain X, Ascobate Peroxidase From Soybean Cytosol In Complex With
Salicylhydroxamic Acid
pdb|2GHH|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHK|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
Length = 261
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 90 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 141
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 142 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 190
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGLLS--TDQLLNSD 307
+ P IFD +Y+T L G GLL +D+ L SD
Sbjct: 191 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 225
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 226 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|3ZCH|A Chain A, Ascorbate Peroxidase W41a-h42m Mutant
Length = 261
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 90 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 141
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 142 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 190
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGL--LSTDQLLNSD 307
+ P IFD +Y+T L G GL L +D+ L SD
Sbjct: 191 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 225
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 226 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|2Y6A|A Chain A, Ascorbate Peroxidase R38a Mutant
Length = 249
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 78 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 129
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 130 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 178
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGL--LSTDQLLNSD 307
+ P IFD +Y+T L G GL L +D+ L SD
Sbjct: 179 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 213
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 214 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 245
>pdb|3ZCG|A Chain A, Ascorbate Peroxidase W41a-h42c Mutant
Length = 261
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 90 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 141
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 142 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 190
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGL--LSTDQLLNSD 307
+ P IFD +Y+T L G GL L +D+ L SD
Sbjct: 191 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 225
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 226 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|2GGN|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHC|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHD|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2GHE|X Chain X, Conformational Mobility In The Active Site Of A Heme
Peroxidase
pdb|2VCN|A Chain A, Structure Of Isoniazid (Inh) Bound To Cytosolic Soybean
Ascorbate Peroxidase Mutant W41a
pdb|2VNX|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a After Exposure To A High Dose Of X-Rays
pdb|2VNZ|X Chain X, Crystal Structure Of Dithinonite Reduced Soybean Ascorbate
Peroxidase Mutant W41a.
pdb|2VO2|X Chain X, Crystal Structure Of Soybean Ascorbate Peroxidase Mutant
W41a Subjected To Low Dose X-Rays
pdb|2WD4|A Chain A, Ascorbate Peroxidase As A Heme Oxygenase: W41a Variant
Product With T-Butyl Peroxide
Length = 261
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 90 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 141
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 142 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 190
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGLLS--TDQLLNSD 307
+ P IFD +Y+T L G GLL +D+ L SD
Sbjct: 191 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 225
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 226 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 257
>pdb|3ZCY|A Chain A, Ascorbate Peroxidase W41a-h42y Mutant
Length = 249
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 84/212 (39%), Gaps = 51/212 (24%)
Query: 135 RIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREAN 192
R+++ +KAE +S AD A A V GGP EVPF GR+D K E
Sbjct: 78 RLLEPLKAEF-----PILSYADFYQLAGVVAVEVTGGP--EVPFHPGRED-KPEPPPEGR 129
Query: 193 RLVPQGHENVTTLIQIF-RDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADP 251
+P + L +F + GL D+V LSG HTIG A + F G
Sbjct: 130 --LPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG-----AAHKERSGFEGPW---- 178
Query: 252 SLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNL--GRNMGL--LSTDQLLNSD 307
+ P IFD +Y+T L G GL L +D+ L SD
Sbjct: 179 -------------------------TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSD 213
Query: 308 ARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P V A+ F + +A + KL +G
Sbjct: 214 PVFRPLVDKYAADEDAFFADYAEAHQKLSELG 245
>pdb|1YYD|A Chain A, High Resolution Crystal Structure Of Manganese Peroxidase
pdb|1YYG|A Chain A, Manganese Peroxidase Complexed With Cd(Ii) Inhibitor
pdb|1YZP|A Chain A, Substrate-free Manganese Peroxidase
pdb|1YZR|A Chain A, Manganese Peroxidase-Sm(Iii) Complex
pdb|1MNP|A Chain A, Manganese Peroxidase
pdb|3M5Q|A Chain A, 0.93 A Structure Of Manganese-Bound Manganese Peroxidase
pdb|3M8M|A Chain A, 1.05 A Structure Of Manganese-Free Manganese Peroxidase
Length = 357
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 115/300 (38%), Gaps = 54/300 (18%)
Query: 72 CPDLEGIIHRQVQAWIR-----KDYTF-------AASLIRLHFHDCVV----------RG 109
CPD + H A+I ++ F A +IRL FHD + G
Sbjct: 3 CPDGTRVSHAACCAFIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGG 62
Query: 110 CDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCP-----KTVSCADILT-AAAR 163
D S++L F + I V P T+S AD++ A A
Sbjct: 63 ADGSMLL----------FPTVEPNFSANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAV 112
Query: 164 DATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRD-HGLNILDLVVL 222
+ G P E GR + I++ + L+P+ ++VT ++Q F D G ++V L
Sbjct: 113 ALSNCPGAPRLEFLAGRPNKTIAAV---DGLIPEPQDSVTKILQRFEDAGGFTPFEVVSL 169
Query: 223 SGAHTIGRSSCDAINHRLH--NFNGTRKADPSLDTK-YLNSLKKKCAASSHVYVDLDATT 279
+H++ R+ D ++ + F+ T + DT+ +L L K + +
Sbjct: 170 LASHSVARA--DKVDQTIDAAPFDSTPF---TFDTQVFLEVLLKGVGFPGSANNTGEVAS 224
Query: 280 PRIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
P + T R L +D L D RT ++ ++ F A+M KL +G
Sbjct: 225 PLPLGSGSDTGEMR----LQSDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLG 280
>pdb|1JCI|A Chain A, Stabilization Of The Engineered Cation-Binding Loop In
Cytochrome C Peroxidase (Ccp)
Length = 294
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 100/258 (38%), Gaps = 35/258 (13%)
Query: 93 FAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKV------SKTLRGFRIIDEIKAEVEK 146
+ L+RL +H + S+ G+ R K + GF+ ++ I E
Sbjct: 42 YGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEF-- 99
Query: 147 KCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREANRLVPQGHENVTT 204
+S D+ + A GP ++P+ GR D + + RL P ++
Sbjct: 100 ---PWISSGDLFSLGGVTAVQEMQGP--KIPWRCGRVDTPEDTTPDNGRL-PDADKDADY 153
Query: 205 LIQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSL--DTKYLNSLK 262
+ F+ +N ++V L GAHT+G++ + + G A+P++ ++ YLN L
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHTLGKTHL-----KNSGYEGPWTANPNVFDNSFYLNLLN 208
Query: 263 KKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPL 322
+ + DA + + Y +L TD L D + V A+
Sbjct: 209 EDWKLEKN-----DANNEQWDSKSGYM-------MLPTDYSLIQDPKYLSIVKEYANDQD 256
Query: 323 VFSSQFAASMVKLGNIGV 340
F F+ + KL G+
Sbjct: 257 KFFKDFSKAFEKLLENGI 274
>pdb|4FEF|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 110/275 (40%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP+G ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPEGFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMG----------LLSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|1STQ|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m3
Length = 294
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 62/147 (42%), Gaps = 16/147 (10%)
Query: 93 FAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKV------SKTLRGFRIIDEIKAEVEK 146
+ L+RL +H + S+ G+ R K + GF+ ++ I E
Sbjct: 42 YGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEF-- 99
Query: 147 KCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREANRLVPQGHENVTT 204
+S D+ + A GP ++P+ GR D + + RL P ++
Sbjct: 100 ---PWISSGDLFSLGGVTAVQEMQGP--KIPWRCGRVDTPEDTTPDNGRL-PDADKDADY 153
Query: 205 LIQIFRDHGLNILDLVVLSGAHTIGRS 231
+ F+ +N ++V LSGAHT+G++
Sbjct: 154 VRTFFQRLNMNDREVVALSGAHTLGKT 180
>pdb|1MN1|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant D179n
Length = 357
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 112/298 (37%), Gaps = 50/298 (16%)
Query: 72 CPDLEGIIHRQVQAWIR-----KDYTF-------AASLIRLHFHDCVV----------RG 109
CPD + H A+I ++ F A +IRL FHD + G
Sbjct: 3 CPDGTRVSHAACCAFIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGGG 62
Query: 110 CDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCP-----KTVSCADILT-AAAR 163
D S++L F + I V P T+S AD++ A A
Sbjct: 63 ADGSMLL----------FPTVEPNFSANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAV 112
Query: 164 DATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRD-HGLNILDLVVL 222
+ G P E GR + I++ + L+P+ ++VT ++Q F D G ++V L
Sbjct: 113 ALSNCPGAPRLEFLAGRPNKTIAAV---DGLIPEPQDSVTKILQRFEDAGGFTPFEVVSL 169
Query: 223 SGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTK-YLNSLKKKCAASSHVYVDLDATTPR 281
+H++ R++ F+ T + DT+ +L L K + +P
Sbjct: 170 LASHSVARANKVDQTIDAAPFDSTPF---TFDTQVFLEVLLKGVGFPGSANNTGEVASPL 226
Query: 282 IFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
+ T R L +D L D RT ++ ++ F A+M KL +G
Sbjct: 227 PLGSGSDTGEMR----LQSDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLG 280
>pdb|1MN2|A Chain A, Manganese Peroxidase Substrate Binding Site Mutant E35q,
D179n
Length = 357
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 112/298 (37%), Gaps = 50/298 (16%)
Query: 72 CPDLEGIIHRQVQAWIR-----KDYTF-------AASLIRLHFHDCVV----------RG 109
CPD + H A+I ++ F A +IRL FHD + G
Sbjct: 3 CPDGTRVSHAACCAFIPLAQDLQETIFQNECGQDAHEVIRLTFHDAIAISRSQGPKAGGG 62
Query: 110 CDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCP-----KTVSCADILT-AAAR 163
D S++L F + I V P T+S AD++ A A
Sbjct: 63 ADGSMLL----------FPTVEPNFSANNGIDDSVNNLIPFMQKHNTISAADLVQFAGAV 112
Query: 164 DATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRD-HGLNILDLVVL 222
+ G P E GR + I++ + L+P+ ++VT ++Q F D G ++V L
Sbjct: 113 ALSNCPGAPRLEFLAGRPNKTIAAV---DGLIPEPQDSVTKILQRFEDAGGFTPFEVVSL 169
Query: 223 SGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTK-YLNSLKKKCAASSHVYVDLDATTPR 281
+H++ R++ F+ T + DT+ +L L K + +P
Sbjct: 170 LASHSVARANKVDQTIDAAPFDSTPF---TFDTQVFLEVLLKGVGFPGSANNTGEVASPL 226
Query: 282 IFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
+ T R L +D L D RT ++ ++ F A+M KL +G
Sbjct: 227 PLGSGSDTGEMR----LQSDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLG 280
>pdb|3FM1|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP+ ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMGL----------LSTDQLLN 305
TP++FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPQVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|1JDR|A Chain A, Crystal Structure Of A Proximal Domain Potassium Binding
Variant Of Cytochrome C Peroxidase
Length = 294
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 16/147 (10%)
Query: 93 FAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKV------SKTLRGFRIIDEIKAEVEK 146
+ L+RL +H + S+ G+ R K + GF+ ++ I E
Sbjct: 42 YGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEF-- 99
Query: 147 KCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREANRLVPQGHENVTT 204
+S D+ + A GP ++P+ GR D + + RL P ++
Sbjct: 100 ---PWISSGDLFSLGGVTAVQEMQGP--KIPWRCGRVDTPEDTTPDNGRL-PDADKDADY 153
Query: 205 LIQIFRDHGLNILDLVVLSGAHTIGRS 231
+ F+ +N ++V L GAHT+G++
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHTLGKT 180
>pdb|1SOG|A Chain A, Cyrstal Structure Of Cytochrome C Peroxidase Mutant:
Ccpk2m2
Length = 294
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 16/147 (10%)
Query: 93 FAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKV------SKTLRGFRIIDEIKAEVEK 146
+ L+RL +H + S+ G+ R K + GF+ ++ I E
Sbjct: 42 YGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEF-- 99
Query: 147 KCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREANRLVPQGHENVTT 204
+S D+ + A GP ++P+ GR D + + RL P ++
Sbjct: 100 ---PWISSGDLFSLGGVTAVQEMQGP--KIPWRCGRVDTPEDTTPDNGRL-PDADKDADY 153
Query: 205 LIQIFRDHGLNILDLVVLSGAHTIGRS 231
+ F+ +N ++V L GAHT+G++
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHTLGKT 180
>pdb|1KRJ|A Chain A, Engineering Calcium-Binding Site Into Cytochrome C
Peroxidase (Ccp)
Length = 294
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 16/147 (10%)
Query: 93 FAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKV------SKTLRGFRIIDEIKAEVEK 146
+ L+RL +H + S+ G+ R K + GF+ ++ I E
Sbjct: 42 YGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFKKEFNDPSNAGLQNGFKFLEPIHKEF-- 99
Query: 147 KCPKTVSCADILTAAARDATVVAGGPFWEVPF--GRKDGKISSAREANRLVPQGHENVTT 204
+S D+ + A GP ++P+ GR D + + RL P ++
Sbjct: 100 ---PWISSGDLFSLGGVTAVQEMQGP--KIPWRCGRVDTPEDTTPDNGRL-PDADKDADY 153
Query: 205 LIQIFRDHGLNILDLVVLSGAHTIGRS 231
+ F+ +N ++V L GAHT+G++
Sbjct: 154 VRTFFQRLNMNDREVVALMGAHTLGKT 180
>pdb|2BOQ|A Chain A, Crystal Structure Of Versatile Peroxidase
Length = 331
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP+ ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMGL----------LSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|3FKG|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP+ ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMGL----------LSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|2W23|A Chain A, Structure Of Mutant W169y Of Pleurotus Eryngii Versatile
Peroxidase (Vp)
Length = 316
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP+ ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVYLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMG----------LLSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|3FM6|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP+ ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPEPQDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMG----------LLSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|3FM4|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 110/275 (40%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP+ ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I ++ K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAA---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMG----------LLSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|3FMU|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP+ ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVSLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMGL----------LSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|3FJW|A Chain A, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
pdb|3FJW|B Chain B, Crystal Structure Analysis Of Fungal Versatile Peroxidase
From Pleurotus Eryngii
Length = 331
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP+ ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMGL----------LSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|2VKA|A Chain A, Site-directed Mutagenesis Of The Catalytic Tryptophan
Environment In Pleurotus Eryngii Versatile Peroxidase
Length = 317
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 108/275 (39%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP+ ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPEPFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMG----------LLSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPGVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S + +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSFVNNQPKI-QNRFAATMSKMALLG 269
>pdb|4G05|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 317
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 108/275 (39%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPGPFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMG----------LLSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|4FDQ|A Chain A, The Crystal Structures Of Several Mutants Of Pleurotus
Eryngii Versatile Peroxidase
Length = 315
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 108/275 (39%), Gaps = 80/275 (29%)
Query: 98 IRLHFHDCVV-------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDEIKAEVEKKCPK 150
+RL FHD + G D SI+ + IDEI + + K
Sbjct: 42 LRLTFHDAIGFSPTLGGGGADGSIIAFDT-------IETNFPANAGIDEIVSAQKPFVAK 94
Query: 151 -TVSCADILT-AAARDATVVAGG---PFWEVPFGRKDGKISSAREANRLVPQGHENVTTL 205
+S D + A A + GG PF+ GR D + A + LVP ++V ++
Sbjct: 95 HNISAGDFIQFAGAVGVSNCPGGVRIPFF---LGRPD---AVAASPDHLVPGPFDSVDSI 148
Query: 206 IQIFRDHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKC 265
+ D G + +++V L +H+I + K DPS+ +S
Sbjct: 149 LARMGDAGFSPVEVVWLLASHSIAAAD---------------KVDPSIPGTPFDS----- 188
Query: 266 AASSHVYVDLDATTPRIFDTAYY--TNL-GR-------NMG----------LLSTDQLLN 305
TP +FD+ ++ T L GR N G L +D LL
Sbjct: 189 -------------TPEVFDSQFFIETQLKGRLFPGTADNKGEAQSPLQGEIRLQSDHLLA 235
Query: 306 SDARTG-PFVSVLASQPLVFSSQFAASMVKLGNIG 339
D +T + S++ +QP + ++FAA+M K+ +G
Sbjct: 236 RDPQTACEWQSMVNNQPKI-QNRFAATMSKMALLG 269
>pdb|1LY8|A Chain A, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
pdb|1LY8|B Chain B, The Crystal Structure Of A Mutant Enzyme Of Coprinus
Cinereus Peroxidase Provides An Understanding Of Its
Increased Thermostability And Insight Into Modelling Of
Protein Structures
Length = 343
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 76/209 (36%), Gaps = 57/209 (27%)
Query: 152 VSCADILT-AAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFR 210
VS D++ AAA + G P E GR SS L+P VT ++ F
Sbjct: 111 VSFGDLIQFAAAVGMSNCPGSPRLEFLTGRS---NSSQPSPPSLIPGPGNTVTAILDRFG 167
Query: 211 DHGLNILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSH 270
D G + ++V L AH SL + +S
Sbjct: 168 DAGFSPDEVVDLLAAH---------------------------------SLASQEGLNSA 194
Query: 271 VYVDLDATTPRIFDTAYY--------TNLGRNMGL------------LSTDQLLNSDART 310
++ +TP++FDT +Y T G ++G + +D LL D+RT
Sbjct: 195 IFRSPLDSTPQVFDTQFYIETLLKGTTQPGPSLGFAEELSPFPGGFRIRSDALLARDSRT 254
Query: 311 GPFVSVLASQPLVFSSQFAASMVKLGNIG 339
+ S V +F A+M K+ +G
Sbjct: 255 ACRWQSMTSSNEVMGQRFRAAMAKMSVLG 283
>pdb|1CK6|A Chain A, Binding Mode Of Salicylhydroxamic Acid To Arthromyces
Ramosus Peroxidase
pdb|1C8I|A Chain A, Binding Mode Of Hydroxylamine To Arthromyces Ramosus
Peroxidase
pdb|1ARP|A Chain A, Crystal Structure Of The Fungal Peroxidase From
Arthromyces Ramosus At 1.9 Angstroms Resolution:
Structural Comparisons With The Lignin And Cytochrome C
Peroxidases
pdb|1ARU|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARV|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARW|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARX|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1ARY|A Chain A, Crystal Structures Of Cyanide-And Triiodide-Bound Forms Of
Arthromyces Ramosus Peroxidase At Different Ph Values.
Perturbations Of Active Site Residues And Their
Implication In Enzyme Catalysis
pdb|1GZA|A Chain A, Peroxidase
pdb|1GZB|A Chain A, Peroxidase
pdb|1HSR|A Chain A, Binding Mode Of Benzhydroxamic Acid To Arthromyces Ramosus
Peroxidase
pdb|2E3B|A Chain A, Crystal Structure Of The Ha-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E3A|A Chain A, Crystal Structure Of The No-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
pdb|2E39|A Chain A, Crystal Structure Of The Cn-Bound Form Of Arthromyces
Ramosus Peroxidase At 1.3 Angstroms Resolution
Length = 344
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 20/110 (18%)
Query: 250 DPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYY--------TNLGRNMGL---- 297
D +D +SL + +S ++ +TP++FDT +Y T G ++G
Sbjct: 175 DEVVDLLAAHSLASQEGLNSAIFRSPLDSTPQVFDTQFYIETLLKGTTQPGPSLGFAEEL 234
Query: 298 --------LSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
+ +D LL D+RT + S V ++ A+M K+ +G
Sbjct: 235 SPFPGEFRMRSDALLARDSRTACRWQSMTSSNEVMGQRYRAAMAKMSVLG 284
>pdb|1LY9|A Chain A, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LY9|B Chain B, The Impact Of The Physical And Chemical Environment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYC|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 20/110 (18%)
Query: 250 DPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYY--------TNLGRNMGL---- 297
D +D +SL + +S ++ +TP++FDT +Y T G ++G
Sbjct: 174 DEVVDLLAAHSLASQEGLNSAIFRSPLDSTPQVFDTQFYIETLLKGTTQPGPSLGFAEEL 233
Query: 298 --------LSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
+ +D LL D+RT + S V ++ A+M K+ +G
Sbjct: 234 SPFPGEFRMRSDALLARDSRTACRWQSMTSSNEVMGQRYRAAMAKMSVLG 283
>pdb|1LYK|A Chain A, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
pdb|1LYK|B Chain B, The Impact Of The Physical And Chemical Enviroment On The
Molecular Structure Of Coprinus Cinereus Peroxidase
Length = 343
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 20/110 (18%)
Query: 250 DPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYY--------TNLGRNMGL---- 297
D +D +SL + +S ++ +TP++FDT +Y T G ++G
Sbjct: 174 DEVVDLLAAHSLASQEGLNSAIFRSPLDSTPQVFDTQFYIETLLKGTTQPGPSLGFAEEL 233
Query: 298 --------LSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
+ +D LL D+RT + S V ++ A+M K+ +G
Sbjct: 234 SPFPGEFRMRSDALLARDSRTACRWQSMTSSNEVMGQRYRAAMAKMSVLG 283
>pdb|1H3J|A Chain A, Structure Of Recombinant Coprinus Cinereus Peroxidase
Determined To 2.0 A
pdb|1H3J|B Chain B, Structure Of Recombinant Coprinus Cinereus Peroxidase
Determined To 2.0 A
Length = 342
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 20/110 (18%)
Query: 250 DPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYY--------TNLGRNMGL---- 297
D +D SL + +S ++ +TP++FDT +Y T G ++G
Sbjct: 173 DEVVDLLAAXSLASQEGLNSAIFRSPLDSTPQVFDTQFYIETLLKGTTQPGPSLGFAEEL 232
Query: 298 --------LSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339
+ +D LL D+RT + S V ++ A+M K+ +G
Sbjct: 233 SPFPGEFRMRSDALLARDSRTACRWQSMTSSNEVMGQRYRAAMAKMSVLG 282
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,055,819
Number of Sequences: 62578
Number of extensions: 333827
Number of successful extensions: 905
Number of sequences better than 100.0: 60
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 793
Number of HSP's gapped (non-prelim): 76
length of query: 360
length of database: 14,973,337
effective HSP length: 100
effective length of query: 260
effective length of database: 8,715,537
effective search space: 2266039620
effective search space used: 2266039620
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)