Query 035963
Match_columns 360
No_of_seqs 186 out of 1484
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 08:02:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/035963.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/035963hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03030 cationic peroxidase; 100.0 2E-104 5E-109 771.7 23.4 300 56-357 18-324 (324)
2 cd00693 secretory_peroxidase H 100.0 2.9E-98 6E-103 725.7 23.8 293 62-356 1-298 (298)
3 PF00141 peroxidase: Peroxidas 100.0 1.8E-71 3.9E-76 521.3 15.2 228 79-320 1-230 (230)
4 PLN02608 L-ascorbate peroxidas 100.0 9.7E-69 2.1E-73 515.1 21.1 231 77-354 15-257 (289)
5 cd00691 ascorbate_peroxidase A 100.0 3.8E-65 8.3E-70 484.3 20.2 227 74-342 11-252 (253)
6 PLN02364 L-ascorbate peroxidas 100.0 6.4E-65 1.4E-69 481.5 19.2 230 66-341 4-248 (250)
7 cd00692 ligninase Ligninase an 100.0 1.3E-64 2.9E-69 494.2 21.8 238 75-359 16-289 (328)
8 PLN02879 L-ascorbate peroxidas 100.0 4.5E-63 9.8E-68 468.5 19.9 220 77-342 18-249 (251)
9 cd00314 plant_peroxidase_like 100.0 9.1E-59 2E-63 440.2 17.9 223 78-337 2-255 (255)
10 cd00649 catalase_peroxidase_1 100.0 2.6E-55 5.7E-60 435.8 18.4 270 63-347 29-401 (409)
11 TIGR00198 cat_per_HPI catalase 100.0 4.5E-52 9.7E-57 435.7 19.2 266 63-343 39-405 (716)
12 cd08201 plant_peroxidase_like_ 100.0 1.1E-50 2.4E-55 384.3 11.6 214 84-337 32-264 (264)
13 PRK15061 catalase/hydroperoxid 100.0 2.6E-49 5.6E-54 413.0 20.4 268 62-343 40-411 (726)
14 cd08200 catalase_peroxidase_2 100.0 1.2E-38 2.7E-43 305.7 17.2 220 81-339 17-296 (297)
15 TIGR00198 cat_per_HPI catalase 100.0 1.5E-33 3.3E-38 296.3 16.3 219 78-339 429-709 (716)
16 PRK15061 catalase/hydroperoxid 100.0 4.2E-33 9.2E-38 291.7 17.6 219 81-339 442-721 (726)
17 COG0376 KatG Catalase (peroxid 100.0 1.8E-28 3.8E-33 247.2 15.9 247 77-339 70-416 (730)
18 COG0376 KatG Catalase (peroxid 99.4 1.9E-12 4.1E-17 132.0 10.9 216 81-339 452-725 (730)
19 PTZ00411 transaldolase-like pr 61.7 73 0.0016 32.1 10.2 60 169-228 180-252 (333)
20 PF07172 GRP: Glycine rich pro 54.2 8.6 0.00019 31.7 1.8 17 1-17 1-17 (95)
21 PF11895 DUF3415: Domain of un 42.8 20 0.00044 28.8 2.2 20 323-342 2-21 (80)
22 TIGR00874 talAB transaldolase. 40.5 1.7E+02 0.0037 29.3 8.9 60 168-227 167-239 (317)
23 PRK12346 transaldolase A; Prov 26.6 76 0.0017 31.8 3.8 77 151-228 149-241 (316)
24 cd00439 Transaldolase Transald 23.0 86 0.0019 30.1 3.4 78 132-216 127-209 (252)
No 1
>PLN03030 cationic peroxidase; Provisional
Probab=100.00 E-value=2.1e-104 Score=771.70 Aligned_cols=300 Identities=40% Similarity=0.703 Sum_probs=284.8
Q ss_pred cCCCCCCCCcCccccCCcCHHHHHHHHHHHHHHhcccchhhhHHhhhccccccCCCCccccCCCcccccccCCCCcchhH
Q 035963 56 LLSPESYLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHKGSERRAKVSKTLRGFR 135 (360)
Q Consensus 56 ~~~~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSIll~~~~~E~~~~~N~~Lrgf~ 135 (360)
.+...++|+++||++|||++|+||++.|++++.++|+++|++|||+||||||+||||||||+++.+||++++|.+|+||+
T Consensus 18 ~~~~~~~L~~~fY~~sCP~aE~iV~~~v~~~~~~d~~~aa~llRL~FHDCfv~GCDaSvLl~~~~~Ek~a~~N~~l~Gf~ 97 (324)
T PLN03030 18 TLVQGQGTRVGFYSTTCPQAESIVRKTVQSHFQSNPAIAPGLLRMHFHDCFVRGCDASILIDGSNTEKTALPNLLLRGYD 97 (324)
T ss_pred ccchhccCccchhhCcCCCHHHHHHHHHHHHHhhCcccchhhhhhhhhhheecCCceEEeeCCCcccccCCCCcCcchHH
Confidence 33444679999999999999999999999999999999999999999999999999999999655899999999999999
Q ss_pred HHHHHHHHHHhhCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCC
Q 035963 136 IIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLN 215 (360)
Q Consensus 136 vId~iK~~le~~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls 215 (360)
+|+.||+.+|++||++||||||||+||||||+++|||.|+|++||||+++|.++++. +||+|+.++++|++.|+++||+
T Consensus 98 ~i~~iK~~~e~~CPg~VSCADilalAarDaV~~~gGP~~~v~~GRrDg~~s~~~~~~-~LP~p~~~~~~l~~~F~~~Gl~ 176 (324)
T PLN03030 98 VIDDAKTQLEAACPGVVSCADILALAARDSVVLTNGLTWPVPTGRRDGRVSLASDAS-NLPGFTDSIDVQKQKFAAKGLN 176 (324)
T ss_pred HHHHHHHHHHhhCCCcccHHHHHHHHhhccccccCCCceeeeccccCCCCCCccccc-CCcCCCCCHHHHHHHHHHcCCC
Confidence 999999999999999999999999999999999999999999999999999887775 8999999999999999999999
Q ss_pred hhhhhhhhcccccccccccccccccccCCCCC-CCCCCCCHHHHHHHhhcCCC--CCCccccCCCCCCcccchHHHHHhh
Q 035963 216 ILDLVVLSGAHTIGRSSCDAINHRLHNFNGTR-KADPSLDTKYLNSLKKKCAA--SSHVYVDLDATTPRIFDTAYYTNLG 292 (360)
Q Consensus 216 ~~dlVaLsGaHTiG~ahc~~f~~Rl~~f~g~~-~~DP~~d~~~~~~L~~~Cp~--~~~~~~~lD~~Tp~~FDN~Yy~~ll 292 (360)
.+|||+||||||||++||.+|.+|||||.|++ .+||+||+.|++.|++.||. ++.+.+++|+.||.+|||+||++|+
T Consensus 177 ~~DlVaLsGAHTiG~ahC~~f~~Rlynf~~~~~~~Dp~~d~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~nll 256 (324)
T PLN03030 177 TQDLVTLVGGHTIGTTACQFFRYRLYNFTTTGNGADPSIDASFVPQLQALCPQNGDGSRRIALDTGSSNRFDASFFSNLK 256 (324)
T ss_pred HHHheeeeeccccceeeeeccccccccccCCCCCCCCchhHHHHHHHhccCCCCCCCCccccCCCCCCcccccHHHHHHH
Confidence 99999999999999999999999999999875 58999999999999999995 2223688999999999999999999
Q ss_pred cccccccchhhhccCCCcHHHHHHhhcCc----hHHHHHHHHHHHHHhcCCCCCCCCCCccccccccCC
Q 035963 293 RNMGLLSTDQLLNSDARTGPFVSVLASQP----LVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVN 357 (360)
Q Consensus 293 ~~~glL~SD~~L~~d~~t~~~V~~yA~d~----~~Ff~~Fa~Am~Km~~igv~tg~~~GeIR~~C~~~N 357 (360)
.++|+|+|||+|+.|++|+++|++||.|+ ++|+++|++||+|||+|+|+|| .+|||||+|+++|
T Consensus 257 ~~rGlL~SDq~L~~d~~T~~~V~~~A~~~~~~~~~F~~~Fa~AmvKMg~i~VlTG-~~GEIRk~C~~vN 324 (324)
T PLN03030 257 NGRGILESDQKLWTDASTRTFVQRFLGVRGLAGLNFNVEFGRSMVKMSNIGVKTG-TNGEIRKVCSAIN 324 (324)
T ss_pred hcCCCcCCchHhhcCccHHHHHHHHhcccccchhhhHHHHHHHHHHHccCCCCCC-CCCceeccccccC
Confidence 99999999999999999999999999885 5999999999999999999999 9999999999998
No 2
>cd00693 secretory_peroxidase Horseradish peroxidase and related secretory plant peroxidases. Secretory peroxidases belong to class III of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class III peroxidases are found in the extracellular space or in the vacuole in plants where they have been implicated in hydrogen peroxide detoxification, auxin catabolism and lignin biosynthesis, and stress response. Class III peroxidases contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=2.9e-98 Score=725.70 Aligned_cols=293 Identities=51% Similarity=0.851 Sum_probs=282.9
Q ss_pred CCCcCccccCCcCHHHHHHHHHHHHHHhcccchhhhHHhhhccccccCCCCccccCCC--c-ccccccCCCCcchhHHHH
Q 035963 62 YLSLSHYHSTCPDLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSHK--G-SERRAKVSKTLRGFRIID 138 (360)
Q Consensus 62 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSIll~~~--~-~E~~~~~N~~Lrgf~vId 138 (360)
||+++||+++||++|+||+++|++.+.++++++|++|||+||||||+||||||||+.+ . +|+++++|.||+||++|+
T Consensus 1 ~L~~~~Y~~sCP~~e~iV~~~v~~~~~~~~~~a~~~lRl~FHDc~v~GcDaSill~~~~~~~~E~~~~~N~~l~g~~~i~ 80 (298)
T cd00693 1 QLSVGFYSKSCPNAESIVRSVVRAAVKADPRLAAALLRLHFHDCFVRGCDASVLLDSTANNTSEKDAPPNLSLRGFDVID 80 (298)
T ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhCCCcCchhhhhhhHhhhccCcceeEEecCCCCCchhccCCCCCCcchhHHHH
Confidence 5999999999999999999999999999999999999999999999999999999874 3 899999999999999999
Q ss_pred HHHHHHHhhCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCChhh
Q 035963 139 EIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILD 218 (360)
Q Consensus 139 ~iK~~le~~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~d 218 (360)
+||+.+|+.||++||||||||||||+||+++|||.|+|++||+|+.++.+..+ +.||+|+.+++++++.|+++||+++|
T Consensus 81 ~iK~~~e~~cp~~VScADiialAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~G~~~~d 159 (298)
T cd00693 81 DIKAALEAACPGVVSCADILALAARDAVVLAGGPSYEVPLGRRDGRVSSANDV-GNLPSPFFSVSQLISLFASKGLTVTD 159 (298)
T ss_pred HHHHHHHhhCCCcccHHHHHHHhhhhceeccCCCcccccCCCcCCcccCcccc-cCCCCcccCHHHHHHHHHHcCCCHHH
Confidence 99999999999999999999999999999999999999999999998877766 78999999999999999999999999
Q ss_pred hhhhhcccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCC--CCccccCCCCCCcccchHHHHHhhcccc
Q 035963 219 LVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAAS--SHVYVDLDATTPRIFDTAYYTNLGRNMG 296 (360)
Q Consensus 219 lVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~--~~~~~~lD~~Tp~~FDN~Yy~~ll~~~g 296 (360)
||||+||||||++||.+|.+|||+|+|++.+||+|++.|+..|+..||+. +...++||+.||.+|||+||++++.++|
T Consensus 160 ~VaL~GaHTiG~~hc~~f~~Rl~~f~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~~~~~lD~~Tp~~FDn~Yy~~l~~~~g 239 (298)
T cd00693 160 LVALSGAHTIGRAHCSSFSDRLYNFSGTGDPDPTLDPAYAAQLRKKCPAGGDDDTLVPLDPGTPNTFDNSYYKNLLAGRG 239 (298)
T ss_pred heeecccceeeeeecccccccccCCCCCCCCCCCccHHHHHHhcCCCCCCCCCCccccCCCCCCCccccHHHHHHHhccc
Confidence 99999999999999999999999999998999999999999999999983 3337899999999999999999999999
Q ss_pred cccchhhhccCCCcHHHHHHhhcCchHHHHHHHHHHHHHhcCCCCCCCCCCccccccccC
Q 035963 297 LLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSV 356 (360)
Q Consensus 297 lL~SD~~L~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~igv~tg~~~GeIR~~C~~~ 356 (360)
+|+|||+|+.|++|+++|++||.||+.|+++|++||+||+++||+|| .+||||++|+++
T Consensus 240 lL~SD~~L~~d~~t~~~V~~~A~d~~~F~~~Fa~Am~Kl~~l~v~tg-~~GeiR~~C~~~ 298 (298)
T cd00693 240 LLTSDQALLSDPRTRAIVNRYAANQDAFFRDFAAAMVKMGNIGVLTG-SQGEIRKNCRVV 298 (298)
T ss_pred CccCCHHhccCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcCCccC-CCCccCCccccC
Confidence 99999999999999999999999999999999999999999999999 999999999975
No 3
>PF00141 peroxidase: Peroxidase; InterPro: IPR002016 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Most haem peroxidases follow the reaction scheme: Fe3+ + H2O2 --> [Fe4+=O]R' (Compound I) + H2O [Fe4+=O]R' + substrate --> [Fe4+=O]R (Compound II) + oxidised substrate [Fe4+=O]R + substrate --> Fe3+ + H2O + oxidised substrate In this mechanism, the enzyme reacts with one equivalent of H2O2 to give [Fe4+=O]R' (compound I). This is a two-electron oxidation/reduction reaction where H2O2 is reduced to water and the enzyme is oxidised. One oxidising equivalent resides on iron, giving the oxyferryl [] intermediate, while in many peroxidases the porphyrin (R) is oxidised to the porphyrin pi-cation radical (R'). Compound I then oxidises an organic substrate to give a substrate radical []. Haem peroxidases include two superfamilies: one found in bacteria, fungi, plants and the second found in animals. The first one can be viewed as consisting of 3 major classes []. Class I, the intracellular peroxidases, includes: yeast cytochrome c peroxidase (CCP), a soluble protein found in the mitochondrial electron transport chain, where it probably protects against toxic peroxides; ascorbate peroxidase (AP), the main enzyme responsible for hydrogen peroxide removal in chloroplasts and cytosol of higher plants; and bacterial catalase- peroxidases, exhibiting both peroxidase and catalase activities. It is thought that catalase-peroxidase provides protection to cells under oxidative stress []. Class II consists of secretory fungal peroxidases: ligninases, or lignin peroxidases (LiPs), and manganese-dependent peroxidases (MnPs). These are monomeric glycoproteins involved in the degradation of lignin. In MnP, Mn2+ serves as the reducing substrate []. Class II proteins contain four conserved disulphide bridges and two conserved calcium-binding sites. Class III consists of the secretory plant peroxidases, which have multiple tissue-specific functions: e.g., removal of hydrogen peroxide from chloroplasts and cytosol; oxidation of toxic compounds; biosynthesis of the cell wall; defence responses towards wounding; indole-3-acetic acid (IAA) catabolism; ethylene biosynthesis; and so on. Class III proteins are also monomeric glycoproteins, containing four conserved disulphide bridges and two calcium ions, although the placement of the disulphides differs from class II enzymes. The crystal structures of a number of these proteins show that they share the same architecture - two all-alpha domains between which the haem group is embedded. ; GO: 0004601 peroxidase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 1QPA_B 2DV2_A 2B2R_B 1MWV_B 2FXJ_A 2FXG_A 2B2O_B 1X7U_B 2B2Q_A 2FXH_A ....
Probab=100.00 E-value=1.8e-71 Score=521.30 Aligned_cols=228 Identities=46% Similarity=0.786 Sum_probs=210.5
Q ss_pred HHHHHHHHHHhcccchhhhHHhhhccccc-cCCCCccccCCCcccccccCCCCcc-hhHHHHHHHHHHHhhCCCCcCHHH
Q 035963 79 IHRQVQAWIRKDYTFAASLIRLHFHDCVV-RGCDASIMLSHKGSERRAKVSKTLR-GFRIIDEIKAEVEKKCPKTVSCAD 156 (360)
Q Consensus 79 V~~~v~~~~~~~~~~aa~lLRL~FHDcfv-~GCDgSIll~~~~~E~~~~~N~~Lr-gf~vId~iK~~le~~cp~~VScAD 156 (360)
||++|++.+.++++++|++|||+|||||+ +|||||||+.. .|+++++|.||+ |+++|++||+++|++||++|||||
T Consensus 1 Vr~~v~~~~~~~~~~~~~~lRl~FHDc~~~~GcDgSil~~~--~e~~~~~N~gl~~~~~~i~~ik~~~~~~cp~~VS~AD 78 (230)
T PF00141_consen 1 VRSDVRAAFKKDPTLAPGLLRLAFHDCFVYGGCDGSILLFS--AEKDAPPNRGLRDGFDVIDPIKAKLEAACPGVVSCAD 78 (230)
T ss_dssp HHHHHHHHHHHHTTSHHHHHHHHHHHHTTHTSSSSGGGGST--TGGGSGGGTTHHHHHHHHHHHHHHHCHHSTTTS-HHH
T ss_pred CHHHHHHHHHHCcCccHHHHHHHccccccccccccceeccc--cccccccccCcceeeechhhHHhhhcccccCCCCHHH
Confidence 89999999999999999999999999999 99999999844 799999999997 999999999999999999999999
Q ss_pred HHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCChhhhhhhhccccccccccccc
Q 035963 157 ILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTIGRSSCDAI 236 (360)
Q Consensus 157 iialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsGaHTiG~ahc~~f 236 (360)
||+||||+||+.+|||.|+|++||+|++++.+.++ .+||+|..+++++++.|+++|||++|||||+||||||++||.+|
T Consensus 79 iialAa~~av~~~GGP~~~v~~GR~D~~~s~~~~~-~~lP~p~~~~~~l~~~F~~~Gls~~e~VaLsGaHTiG~~~c~~f 157 (230)
T PF00141_consen 79 IIALAARDAVELCGGPRIPVPLGRRDGTVSSPSGA-SNLPSPTDSVDQLLAFFARKGLSAEEMVALSGAHTIGRAHCSSF 157 (230)
T ss_dssp HHHHHHHHHHHHTTGGHSHBEB-EBB-SSGGHHHH-HHSSTTTSHHHHHHHHHHHTT--HHHHHHHHGGGGSTEESGGCT
T ss_pred HHHHHhhhccccccccccccccccccccccccccc-ccccccccccchhhhhhhccccchhhhcceecccccccceeccc
Confidence 99999999999999999999999999999999877 78999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchHHHHHhhcccccccchhhhccCCCcHHHHHH
Q 035963 237 NHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMGLLSTDQLLNSDARTGPFVSV 316 (360)
Q Consensus 237 ~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~Yy~~ll~~~glL~SD~~L~~d~~t~~~V~~ 316 (360)
. ||| + .+||+||+.|+.. .|+.++...+++| ||.+|||+||+++++++|+|+||++|++|++|+++|++
T Consensus 158 ~-rl~-~----~~dp~~d~~~~~~---~C~~~~~~~~~~d--tp~~fDN~Yy~~ll~~~gll~SD~~L~~d~~t~~~V~~ 226 (230)
T PF00141_consen 158 S-RLY-F----PPDPTMDPGYAGQ---NCNSGGDNGVPLD--TPTVFDNSYYKNLLNGRGLLPSDQALLNDPETRPIVER 226 (230)
T ss_dssp G-GTS-C----SSGTTSTHHHHHH---SSSTSGCTCEESS--STTS-SSHHHHHHHHTEEEEHHHHHHHHSTTHHHHHHH
T ss_pred c-ccc-c----cccccccccccee---ccCCCcccccccc--CCCcchhHHHHHHhcCCCcCHHHHHHhcCHHHHHHHHH
Confidence 9 999 5 4799999999988 8954322277889 99999999999999999999999999999999999999
Q ss_pred hhcC
Q 035963 317 LASQ 320 (360)
Q Consensus 317 yA~d 320 (360)
||+|
T Consensus 227 yA~d 230 (230)
T PF00141_consen 227 YAQD 230 (230)
T ss_dssp HHHT
T ss_pred HhcC
Confidence 9976
No 4
>PLN02608 L-ascorbate peroxidase
Probab=100.00 E-value=9.7e-69 Score=515.12 Aligned_cols=231 Identities=28% Similarity=0.412 Sum_probs=211.0
Q ss_pred HHHHHHHHHHHHhcccchhhhHHhhhcccc-------ccCCCCccccCCCcccccccCCCCc-chhHHHHHHHHHHHhhC
Q 035963 77 GIIHRQVQAWIRKDYTFAASLIRLHFHDCV-------VRGCDASIMLSHKGSERRAKVSKTL-RGFRIIDEIKAEVEKKC 148 (360)
Q Consensus 77 ~iV~~~v~~~~~~~~~~aa~lLRL~FHDcf-------v~GCDgSIll~~~~~E~~~~~N~~L-rgf~vId~iK~~le~~c 148 (360)
+.+++++ ..+.++|.++|.+|||+||||| ++||||||++. +|+++++|.|| +||++|++||+++
T Consensus 15 ~~~~~~~-~~~~~d~~~a~~llRLaFHDc~t~d~~~~~gGcDgSIll~---~E~~~~~N~gL~~g~~vid~iK~~~---- 86 (289)
T PLN02608 15 EKARRDL-RALIASKNCAPIMLRLAWHDAGTYDAKTKTGGPNGSIRNE---EEYSHGANNGLKIAIDLCEPVKAKH---- 86 (289)
T ss_pred HHHHHHH-HHHHHCCCcHHHHHHHhhhhcCCcCCCCCCCCCCeeeecc---cccCCccccchHHHHHHHHHHHHHc----
Confidence 4567777 4477899999999999999999 99999999996 59999999999 6999999999987
Q ss_pred CCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCChhhhhhhhccccc
Q 035963 149 PKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTI 228 (360)
Q Consensus 149 p~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsGaHTi 228 (360)
++|||||||+||||+||+.+|||.|+|++||+|++++.+ +++||+|+.+++++++.|+++||+++|||+|+|||||
T Consensus 87 -~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~LP~p~~~~~~l~~~F~~~Gl~~~D~VaLsGAHTi 162 (289)
T PLN02608 87 -PKITYADLYQLAGVVAVEVTGGPTIDFVPGRKDSNACPE---EGRLPDAKKGAKHLRDVFYRMGLSDKDIVALSGGHTL 162 (289)
T ss_pred -CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCcCCc---cCCCcCCCCCHHHHHHHHHHcCCCHHHHhhhcccccc
Confidence 489999999999999999999999999999999999864 3689999999999999999999999999999999999
Q ss_pred ccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchHHHHHhhcc--ccc--ccchhhh
Q 035963 229 GRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRN--MGL--LSTDQLL 304 (360)
Q Consensus 229 G~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~Yy~~ll~~--~gl--L~SD~~L 304 (360)
|++||. |+ +|.|. ++ .||.+|||+||++++.+ +|+ |+||++|
T Consensus 163 G~ahc~----r~-g~~g~----------------------------~~-~Tp~~FDN~Yy~~ll~~~~~gll~L~SD~~L 208 (289)
T PLN02608 163 GRAHPE----RS-GFDGP----------------------------WT-KEPLKFDNSYFVELLKGESEGLLKLPTDKAL 208 (289)
T ss_pred cccccc----CC-CCCCC----------------------------CC-CCCCccChHHHHHHHcCCcCCccccccCHhh
Confidence 999994 54 44321 12 68999999999999999 788 7999999
Q ss_pred ccCCCcHHHHHHhhcCchHHHHHHHHHHHHHhcCCCCCCCCCCccccccc
Q 035963 305 NSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCS 354 (360)
Q Consensus 305 ~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~igv~tg~~~GeIR~~C~ 354 (360)
+.|++|+++|+.||.||++|+++|++||+||+++||+|| .+||+.+.-+
T Consensus 209 ~~d~~T~~~V~~fA~~~~~F~~~Fa~Am~Km~~lgvltg-~~Ge~~~~~~ 257 (289)
T PLN02608 209 LEDPEFRPYVELYAKDEDAFFRDYAESHKKLSELGFTPP-SSAFKKKSTS 257 (289)
T ss_pred hcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCC-CCCcccccCc
Confidence 999999999999999999999999999999999999999 9999987543
No 5
>cd00691 ascorbate_peroxidase Ascorbate peroxidases and cytochrome C peroxidases. Ascorbate peroxidases are a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Along with related catalase-peroxidases, ascorbate peroxidases belong to class I of the plant superfamily. Ascorbate peroxidases are found in the chloroplasts and/or cytosol of algae and plants, where they have been shown to control the concentration of lethal hydrogen peroxide molecules. The yeast cytochrome c peroxidase is a divergent member of the family; it forms a complex with cytochrome c to catalyze the reduction of hydrogen peroxide to water.
Probab=100.00 E-value=3.8e-65 Score=484.27 Aligned_cols=227 Identities=26% Similarity=0.362 Sum_probs=206.0
Q ss_pred CHHHHHHHHHHHHHHhcccchhhhHHhhhccccccCCCCccccCC---C--c-ccccccCCCCc-chhHHHHHHHHHHHh
Q 035963 74 DLEGIIHRQVQAWIRKDYTFAASLIRLHFHDCVVRGCDASIMLSH---K--G-SERRAKVSKTL-RGFRIIDEIKAEVEK 146 (360)
Q Consensus 74 ~~e~iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~GCDgSIll~~---~--~-~E~~~~~N~~L-rgf~vId~iK~~le~ 146 (360)
..++||++.|++.+. ++.++|++|||+|||||+ ||+|++++. + . +|+++++|.+| +||++|++||+++
T Consensus 11 ~~~~~V~~~v~~~~~-~~~~~~~llRl~FHDc~~--~d~s~~~~G~d~s~~~~~E~~~~~N~~L~~~~~~i~~iK~~~-- 85 (253)
T cd00691 11 KDLEAARNDIAKLID-DKNCAPILVRLAWHDSGT--YDKETKTGGSNGTIRFDPELNHGANAGLDIARKLLEPIKKKY-- 85 (253)
T ss_pred HHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHhc--cccccCCCCCCccccchhhcCCccccchHHHHHHHHHHHHHc--
Confidence 457899999999999 999999999999999984 666655532 1 1 59999999999 8999999999987
Q ss_pred hCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCChhhhhhhhccc
Q 035963 147 KCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAH 226 (360)
Q Consensus 147 ~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsGaH 226 (360)
| +||||||||||||+||+.+|||.|+|++||+|+.++....++.+||.|+.+++++++.|+++||+++|||||+|||
T Consensus 86 --~-~VScADilalAar~Av~~~GGP~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gls~~d~VaLsGaH 162 (253)
T cd00691 86 --P-DISYADLWQLAGVVAIEEMGGPKIPFRPGRVDASDPEECPPEGRLPDASKGADHLRDVFYRMGFNDQEIVALSGAH 162 (253)
T ss_pred --C-CCCHHHHHHHHHHHHHHHcCCCccCcccCCCCCCcccccCcccCCCCCCCCHHHHHHHHHhcCCCHHHHHHhcccc
Confidence 4 8999999999999999999999999999999999998777778999999999999999999999999999999999
Q ss_pred ccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchHHHHHhhcccc--------cc
Q 035963 227 TIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMG--------LL 298 (360)
Q Consensus 227 TiG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~Yy~~ll~~~g--------lL 298 (360)
|||++||.. ++|.|+ |..||.+|||+||++|+.++| +|
T Consensus 163 TiG~a~c~~-----~~~~g~-----------------------------~~~tp~~FDn~Yy~~ll~~~g~~~~~~~~~L 208 (253)
T cd00691 163 TLGRCHKER-----SGYDGP-----------------------------WTKNPLKFDNSYFKELLEEDWKLPTPGLLML 208 (253)
T ss_pred eeecccccC-----CCCCCC-----------------------------CCCCCCcccHHHHHHHhcCCCccCcCcceec
Confidence 999999953 243321 115899999999999999999 99
Q ss_pred cchhhhccCCCcHHHHHHhhcCchHHHHHHHHHHHHHhcCCCCC
Q 035963 299 STDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLA 342 (360)
Q Consensus 299 ~SD~~L~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~igv~t 342 (360)
+||++|+.|++|+++|+.||.|+++|+++|++||+||+++||..
T Consensus 209 ~sD~~L~~d~~t~~~v~~~a~~~~~F~~~Fa~Am~Km~~l~v~~ 252 (253)
T cd00691 209 PTDKALLEDPKFRPYVELYAKDQDAFFKDYAEAHKKLSELGVPF 252 (253)
T ss_pred hhhHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999999999964
No 6
>PLN02364 L-ascorbate peroxidase 1
Probab=100.00 E-value=6.4e-65 Score=481.51 Aligned_cols=230 Identities=28% Similarity=0.448 Sum_probs=208.5
Q ss_pred CccccC--CcCHHHHHHHHHHHHHHhcccchhhhHHhhhc-----ccccc--CCCCccccCCCcccccccCCCCc-chhH
Q 035963 66 SHYHST--CPDLEGIIHRQVQAWIRKDYTFAASLIRLHFH-----DCVVR--GCDASIMLSHKGSERRAKVSKTL-RGFR 135 (360)
Q Consensus 66 ~fY~~s--CP~~e~iV~~~v~~~~~~~~~~aa~lLRL~FH-----Dcfv~--GCDgSIll~~~~~E~~~~~N~~L-rgf~ 135 (360)
+||..+ |+.+++.++..+++.+ .++.++|.+|||+|| ||+++ ||||||.++ +|+++++|.|| +||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~~~lRl~FHd~~t~dc~~~~GG~dgSi~~~---~E~~~~~N~gl~~~~~ 79 (250)
T PLN02364 4 NYPTVSEDYKKAVEKCRRKLRGLI-AEKNCAPIMVRLAWHSAGTFDCQSRTGGPFGTMRFD---AEQAHGANSGIHIALR 79 (250)
T ss_pred CCCCccHHHHHHHHHHHHHHHHHH-hCCCcHHHHHHHHHccccCcCcCCCCCCCCcccccc---ccccCCCccCHHHHHH
Confidence 466544 8889999999999988 789999999999999 88876 999999775 59999999999 8999
Q ss_pred HHHHHHHHHHhhCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHH-CCC
Q 035963 136 IIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRD-HGL 214 (360)
Q Consensus 136 vId~iK~~le~~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~-~Gl 214 (360)
+|+.||+++ ++||||||||||||+||+++|||.|+|++||+|++++.+ ++.||.|+.++++|++.|++ +||
T Consensus 80 ~i~~ik~~~-----~~VScADilalAardAV~~~GGP~~~v~~GR~D~~~s~~---~~~lP~p~~~~~~l~~~F~~~~Gl 151 (250)
T PLN02364 80 LLDPIREQF-----PTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPP---EGRLPDATKGCDHLRDVFAKQMGL 151 (250)
T ss_pred HHHHHHHHc-----CCcCHHHHHHHHHHHHHHhcCCCeeCCCCCCCCcccccc---cCCCCCCCcCHHHHHHHHHHhcCC
Confidence 999999998 589999999999999999999999999999999999875 36899999999999999997 599
Q ss_pred ChhhhhhhhcccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchHHHHHhhcc
Q 035963 215 NILDLVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRN 294 (360)
Q Consensus 215 s~~dlVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~Yy~~ll~~ 294 (360)
+++|||||+||||||++|| .|+ +|.|. ++ .||.+|||+||++|+.+
T Consensus 152 ~~~d~VaLsGaHTiG~~hc----~r~-~~~g~----------------------------~~-~tp~~fDn~Yy~~ll~~ 197 (250)
T PLN02364 152 SDKDIVALSGAHTLGRCHK----DRS-GFEGA----------------------------WT-SNPLIFDNSYFKELLSG 197 (250)
T ss_pred CHHHheeeecceeeccccC----CCC-CCCCC----------------------------CC-CCCCccchHHHHHHhcC
Confidence 9999999999999999999 454 44321 12 68999999999999999
Q ss_pred --ccccc--chhhhccCCCcHHHHHHhhcCchHHHHHHHHHHHHHhcCCCC
Q 035963 295 --MGLLS--TDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVL 341 (360)
Q Consensus 295 --~glL~--SD~~L~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~igv~ 341 (360)
+|+|. ||++|+.|++|+.+|+.||.|+++|+++|++||+||+++|+-
T Consensus 198 ~~~gll~l~sD~~L~~d~~T~~~v~~~a~~~~~F~~~Fa~Am~Km~~lg~~ 248 (250)
T PLN02364 198 EKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFA 248 (250)
T ss_pred CcCCCccccchHHHccCchHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCC
Confidence 89865 999999999999999999999999999999999999999974
No 7
>cd00692 ligninase Ligninase and other manganese-dependent fungal peroxidases. Ligninases and related extracellular fungal peroxidases belong to class II of the plant heme-dependent peroxidase superfamily. All members of the superfamily share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Class II peroxidases are fungal glycoproteins that have been implicated in the oxidative breakdown of lignin, the main cell wall component of woody plants. They contain four conserved disulphide bridges and two conserved calcium binding sites.
Probab=100.00 E-value=1.3e-64 Score=494.22 Aligned_cols=238 Identities=29% Similarity=0.368 Sum_probs=214.9
Q ss_pred HHHHHHHHHHHHHHhc---ccchhhhHHhhhccccc------------cCCCCccccCCCcccccccCCCCcchhHHHHH
Q 035963 75 LEGIIHRQVQAWIRKD---YTFAASLIRLHFHDCVV------------RGCDASIMLSHKGSERRAKVSKTLRGFRIIDE 139 (360)
Q Consensus 75 ~e~iV~~~v~~~~~~~---~~~aa~lLRL~FHDcfv------------~GCDgSIll~~~~~E~~~~~N~~Lrgf~vId~ 139 (360)
+|..|+++|++.+..+ ...|+.+|||+||||++ +|||||||++.+ .|+++++|.||+ ++|+.
T Consensus 16 ~~~~v~~dl~~~~~~~~~c~~~a~~~lRL~FHD~~~~~~~~~~~~~~~gGcDgSill~~~-~E~~~~~N~gL~--~vvd~ 92 (328)
T cd00692 16 VWFDILDDIQGNLFNGGECGEEAHESLRLTFHDAIGFSPALAAGQFGGGGADGSIVLFDD-IETAFHANIGLD--EIVEA 92 (328)
T ss_pred chHHHHHHHHHHHhcCCCCchHHHHhHHHhhhcccccccccccCCCCCCCcCceeecCCc-ccccCCCCCCHH--HHHHH
Confidence 7999999999999854 44677899999999996 899999999743 699999999998 89999
Q ss_pred HHHHHHhhCCCCcCHHHHHHHhHHHHHHhh-CCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCChhh
Q 035963 140 IKAEVEKKCPKTVSCADILTAAARDATVVA-GGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILD 218 (360)
Q Consensus 140 iK~~le~~cp~~VScADiialAar~AV~~~-GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~d 218 (360)
+|..+|+.| ||||||||||||+||+.+ |||.|+|++||+|++++.+. +.||.|+.+++++++.|+++||+++|
T Consensus 93 lk~~~e~~c---VScADiialAa~~AV~~~~GGP~i~v~~GR~D~~~s~~~---g~LP~p~~sv~~l~~~F~~~Gf~~~E 166 (328)
T cd00692 93 LRPFHQKHN---VSMADFIQFAGAVAVSNCPGAPRLEFYAGRKDATQPAPD---GLVPEPFDSVDKILARFADAGFSPDE 166 (328)
T ss_pred HHHHHHhcC---cCHHHHHHHHHHHHHHhcCCCCcccccCCCCCCCCCCcc---cCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 999999998 999999999999999965 99999999999999998654 68999999999999999999999999
Q ss_pred hhhhhcccccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchHHHHHhh-cccc-
Q 035963 219 LVVLSGAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLG-RNMG- 296 (360)
Q Consensus 219 lVaLsGaHTiG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~Yy~~ll-~~~g- 296 (360)
||+|+||||||++|. .||+++ ..++| .||.+|||+||++++ .+++
T Consensus 167 ~VaLsGAHTiG~a~~---------------~Dps~~-----------------g~p~D-~TP~~FDn~Yf~~ll~~~~~~ 213 (328)
T cd00692 167 LVALLAAHSVAAQDF---------------VDPSIA-----------------GTPFD-STPGVFDTQFFIETLLKGTAF 213 (328)
T ss_pred HhhhcccccccccCC---------------CCCCCC-----------------CCCCC-CCcchhcHHHHHHHHHcCCCC
Confidence 999999999999982 367664 35678 699999999999987 5555
Q ss_pred ------------------cccchhhhccCCCcHHHHHHhhcCchHHHHHHHHHHHHHhcCCCCCCCCCCccccccccCCC
Q 035963 297 ------------------LLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLARPNEGEIRFKCSSVNR 358 (360)
Q Consensus 297 ------------------lL~SD~~L~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~igv~tg~~~GeIR~~C~~~N~ 358 (360)
+|+||++|+.|++|+.+|++||.||++|+++|++||+||+++||.. ..+.+|+.|+|
T Consensus 214 ~g~~~~~~e~~~~~~g~~~L~SD~~L~~D~~T~~~v~~fa~dq~~f~~~Fa~Am~KLs~lgv~~-----~~l~dcs~v~p 288 (328)
T cd00692 214 PGSGGNQGEVESPLPGEFRLQSDFLLARDPRTACEWQSFVNNQAKMNAAFAAAMLKLSLLGQDN-----ISLTDCSDVIP 288 (328)
T ss_pred CCccccccccccCccccccccchHHHhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCc-----chhccCcccCC
Confidence 4999999999999999999999999999999999999999999862 27779999997
Q ss_pred C
Q 035963 359 A 359 (360)
Q Consensus 359 ~ 359 (360)
.
T Consensus 289 ~ 289 (328)
T cd00692 289 P 289 (328)
T ss_pred C
Confidence 4
No 8
>PLN02879 L-ascorbate peroxidase
Probab=100.00 E-value=4.5e-63 Score=468.49 Aligned_cols=220 Identities=30% Similarity=0.432 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHhcccchhhhHHhhhcccc-------ccCCCCccccCCCcccccccCCCCcc-hhHHHHHHHHHHHhhC
Q 035963 77 GIIHRQVQAWIRKDYTFAASLIRLHFHDCV-------VRGCDASIMLSHKGSERRAKVSKTLR-GFRIIDEIKAEVEKKC 148 (360)
Q Consensus 77 ~iV~~~v~~~~~~~~~~aa~lLRL~FHDcf-------v~GCDgSIll~~~~~E~~~~~N~~Lr-gf~vId~iK~~le~~c 148 (360)
+-++.++.+.+ .+...+|.+|||+||||. .|||||||++. .|+++++|.||+ ++++|++||+++
T Consensus 18 ~~~~~~~~~~~-~~~~~~p~~vRla~Hdagt~~~~~~~GG~~Gsirf~---~E~~~~~N~gL~~~~~~i~~iK~~~---- 89 (251)
T PLN02879 18 QRCKRKLRGLI-AEKHCAPIVLRLAWHSAGTFDVKTKTGGPFGTIRHP---QELAHDANNGLDIAVRLLDPIKELF---- 89 (251)
T ss_pred HHHHHHHHHHH-hCCCchhHhHHHHHhhhccccCCCCCCCCCeeecCh---hhccCCCcCChHHHHHHHHHHHHHc----
Confidence 34577777766 457899999999999996 48999999986 599999999997 999999999998
Q ss_pred CCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCChhhhhhhhccccc
Q 035963 149 PKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSGAHTI 228 (360)
Q Consensus 149 p~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsGaHTi 228 (360)
++||||||||||||+||+.+|||.|+|++||+|+..+.+ +++||+|+.+++++++.|+++||+++|||||+|||||
T Consensus 90 -~~VScADilalAa~~AV~~~GGP~~~~~~GR~D~~~~~~---~~~lP~p~~~~~~l~~~F~~~Gl~~~dlVALsGaHTi 165 (251)
T PLN02879 90 -PILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPP---EGRLPQATKGVDHLRDVFGRMGLNDKDIVALSGGHTL 165 (251)
T ss_pred -CCcCHHHHHHHHHHHHHHhcCCCccCCCCCCCCCCCCCc---ccCCCCCCCCHHHHHHHHHHcCCCHHHHeeeeccccc
Confidence 589999999999999999999999999999999998854 4689999999999999999999999999999999999
Q ss_pred ccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchHHHHHhhcc--ccc--ccchhhh
Q 035963 229 GRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRN--MGL--LSTDQLL 304 (360)
Q Consensus 229 G~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~Yy~~ll~~--~gl--L~SD~~L 304 (360)
|++||. | ++|.|. +| .||.+|||+||++|+.+ +|+ |+||++|
T Consensus 166 G~ah~~----r-~g~~g~----------------------------~d-~tp~~FDN~Yy~~ll~~~~~gll~L~SD~aL 211 (251)
T PLN02879 166 GRCHKE----R-SGFEGA----------------------------WT-PNPLIFDNSYFKEILSGEKEGLLQLPTDKAL 211 (251)
T ss_pred cccccc----c-ccCCCC----------------------------CC-CCccceeHHHHHHHHcCCcCCCccchhhHHH
Confidence 999995 4 444331 23 68999999999999999 888 6799999
Q ss_pred ccCCCcHHHHHHhhcCchHHHHHHHHHHHHHhcCCCCC
Q 035963 305 NSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIGVLA 342 (360)
Q Consensus 305 ~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~igv~t 342 (360)
+.|++|+++|++||.||++||++|++||+||++||+..
T Consensus 212 ~~D~~t~~~V~~~A~d~~~F~~~Fa~Am~KL~~lg~~~ 249 (251)
T PLN02879 212 LDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249 (251)
T ss_pred hcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999999999999853
No 9
>cd00314 plant_peroxidase_like Heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX), which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions. Several sub-families can be identified. Class I includes intracellular peroxidases present in fungi, plants, archaea and bacteria, called catalase-peroxidases, that can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. Catalase-peroxidases are typically comprised of two homologous domains that probably arose via a single gene duplication event. Class II includes ligninase and other extracellular fungal peroxidases, while class III is comprised
Probab=100.00 E-value=9.1e-59 Score=440.21 Aligned_cols=223 Identities=34% Similarity=0.465 Sum_probs=205.7
Q ss_pred HHHHHHHHHHHhcccchhhhHHhhhcccccc--------CCCCccccCCCcccccccCCCCc-chhHHHHHHHHHHHhhC
Q 035963 78 IIHRQVQAWIRKDYTFAASLIRLHFHDCVVR--------GCDASIMLSHKGSERRAKVSKTL-RGFRIIDEIKAEVEKKC 148 (360)
Q Consensus 78 iV~~~v~~~~~~~~~~aa~lLRL~FHDcfv~--------GCDgSIll~~~~~E~~~~~N~~L-rgf~vId~iK~~le~~c 148 (360)
.|++.|++.+.+++.+++++|||+||||++. ||||||+++. |+++++|.+| +++++|++||.++|.
T Consensus 2 ~v~~~l~~~~~~~~~~~~~llRl~fHD~~~~~~~~~~~gg~dgsi~~~~---e~~~~~N~~l~~~~~~l~~ik~~~~~-- 76 (255)
T cd00314 2 AIKAILEDLITQAGALAGSLLRLAFHDAGTYDIADGKGGGADGSIRFEP---ELDRPENGGLDKALRALEPIKSAYDG-- 76 (255)
T ss_pred hHHHHHHHHHHhCcchHHHHHHHHHHHhccccccCCCCCCCCceEeccc---cccCcccccHHHHHHHHHHHHHHcCC--
Confidence 5889999999999999999999999999986 9999999984 9999999997 999999999999998
Q ss_pred CCCcCHHHHHHHhHHHHHHhh--CCCccccccccccCCCCc--hhhhccCCCCCCCCHHHHHHHHHHCCCChhhhhhhh-
Q 035963 149 PKTVSCADILTAAARDATVVA--GGPFWEVPFGRKDGKISS--AREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLS- 223 (360)
Q Consensus 149 p~~VScADiialAar~AV~~~--GGP~~~v~~GRrD~~~s~--~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLs- 223 (360)
|++|||||||++|+++||+.+ |||.|+|++||+|+..+. ...+...+|.|..+++++++.|+++||+++|||||+
T Consensus 77 ~~~vS~ADlialAa~~Av~~~~~ggp~~~~~~GR~D~~~~~~~~p~P~~~~p~~~~~~~~~~~~F~~~Gl~~~e~VAL~~ 156 (255)
T cd00314 77 GNPVSRADLIALAGAVAVESTFGGGPLIPFRFGRLDATEPDLGVPDPEGLLPNETSSATELRDKFKRMGLSPSELVALSA 156 (255)
T ss_pred CCcccHHHHHHHHHHHHHHHhccCCCeeeeCCCCCCCchhhccCCCCCCCCCCccchHHHHHHHHHHcCCCHHHHHhhcc
Confidence 899999999999999999999 999999999999999764 233346788888899999999999999999999999
Q ss_pred ccccc-ccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchHHHHHhhccc-------
Q 035963 224 GAHTI-GRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNM------- 295 (360)
Q Consensus 224 GaHTi-G~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~Yy~~ll~~~------- 295 (360)
||||| |++||..|..|+ |+ +|..||.+|||+||++++.++
T Consensus 157 GaHti~G~~~~~~~~~~~------------------------~~--------~~~~tp~~fDN~yy~~l~~~~~~~~~~~ 204 (255)
T cd00314 157 GAHTLGGKNHGDLLNYEG------------------------SG--------LWTSTPFTFDNAYFKNLLDMNWEWRVGS 204 (255)
T ss_pred CCeeccCcccCCCCCccc------------------------CC--------CCCCCCCccchHHHHHHhcCCcccccCC
Confidence 99999 999999877664 21 234799999999999999988
Q ss_pred ---------ccccchhhhccCCCcHHHHHHhhcCchHHHHHHHHHHHHHhc
Q 035963 296 ---------GLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGN 337 (360)
Q Consensus 296 ---------glL~SD~~L~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~ 337 (360)
++|+||++|+.|++|+.+|+.||.|+++|+++|++||+||++
T Consensus 205 ~~~~~~~~~~~l~sD~~L~~d~~t~~~v~~ya~~~~~f~~~Fa~a~~Km~~ 255 (255)
T cd00314 205 PDPDGVKGPGLLPSDYALLSDSETRALVERYASDQEKFFEDFAKAWIKMVN 255 (255)
T ss_pred ccCCCcccCCCchhhHHHhcCHhHHHHHHHHHhCHHHHHHHHHHHHHHHcC
Confidence 899999999999999999999999999999999999999984
No 10
>cd00649 catalase_peroxidase_1 N-terminal catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms, where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to class I of the plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C
Probab=100.00 E-value=2.6e-55 Score=435.79 Aligned_cols=270 Identities=19% Similarity=0.250 Sum_probs=234.2
Q ss_pred CCcCc-cccCCcCH-HHHHHHHHHHHHHhc--------ccchhhhHHhhhccccc-------cCCC-CccccCCCccccc
Q 035963 63 LSLSH-YHSTCPDL-EGIIHRQVQAWIRKD--------YTFAASLIRLHFHDCVV-------RGCD-ASIMLSHKGSERR 124 (360)
Q Consensus 63 L~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GCD-gSIll~~~~~E~~ 124 (360)
+-.+| |.+.+-.+ .+.|+++|++.+... ...+|.+|||+|||+.+ ||++ |+|++. +|++
T Consensus 29 ~~~~~~~~~~~~~~d~~~~~~di~~ll~~s~~~wp~D~g~~gp~lvRlAWh~AgTy~~~d~~GG~ngg~iRf~---pe~~ 105 (409)
T cd00649 29 MGEDFNYAEEFKKLDLEALKEDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIADGRGGAGTGQQRFA---PLNS 105 (409)
T ss_pred CCCCCCHHHHhhhccHHHHHHHHHHHHhcccccCccccCCcccceeeeeccccccccCcCCCCCCCCCccccc---cccC
Confidence 44444 55555443 378999999999865 37999999999999985 8997 799998 5999
Q ss_pred ccCCCCc-chhHHHHHHHHHHHhhCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchh--------------
Q 035963 125 AKVSKTL-RGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAR-------------- 189 (360)
Q Consensus 125 ~~~N~~L-rgf~vId~iK~~le~~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~-------------- 189 (360)
++.|.+| ++..++++||+++ |..||+||+|+||+.+||+.+|||.|++.+||.|...+...
T Consensus 106 ~~~N~gL~~a~~~L~pik~k~----~~~iS~ADL~~LaG~~AiE~~Ggp~ipf~~GR~Da~~~~~~v~wg~~~~~~~~~~ 181 (409)
T cd00649 106 WPDNVNLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGPEKEWLADKR 181 (409)
T ss_pred cHhhhhHHHHHHHHHHHHHHc----CCCccHHHHHHHHHHHHHHHcCCCcccccCCCCccCCCccccccCcchhcccccc
Confidence 9999999 6889999999988 45799999999999999999999999999999999754320
Q ss_pred ---------------------hhcc--CCCCCCCCHHHHHHHHHHCCCChhhhhhh-hcccccccccccccccccccCCC
Q 035963 190 ---------------------EANR--LVPQGHENVTTLIQIFRDHGLNILDLVVL-SGAHTIGRSSCDAINHRLHNFNG 245 (360)
Q Consensus 190 ---------------------~a~~--~lP~p~~~~~~l~~~F~~~Gls~~dlVaL-sGaHTiG~ahc~~f~~Rl~~f~g 245 (360)
.+++ .||+|..++.+|++.|++|||+++||||| +||||||++||..|.+||.
T Consensus 182 ~~~~~~l~~pl~a~~mgliyv~Pegp~gLPdP~~sa~~LR~~F~RmGlnd~E~VAL~sGAHTiGkaHc~~~~~rlg---- 257 (409)
T cd00649 182 YSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPLAAAKDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASHVG---- 257 (409)
T ss_pred cccchhhccchhhhhccccccCCCCCCCCCCCccCHHHHHHHHHHcCCCHHHHeeeccCCcceeecCcccccccCC----
Confidence 0122 69999999999999999999999999999 5999999999999999983
Q ss_pred CCCCCCCCCHHHHHHHh--hcCCCC---CCccccCC---CCCCcccchHHHHHhhc------------------------
Q 035963 246 TRKADPSLDTKYLNSLK--KKCAAS---SHVYVDLD---ATTPRIFDTAYYTNLGR------------------------ 293 (360)
Q Consensus 246 ~~~~DP~~d~~~~~~L~--~~Cp~~---~~~~~~lD---~~Tp~~FDN~Yy~~ll~------------------------ 293 (360)
+||.+++.|+..|. ..||.+ ++....+| ..||.+|||+||++|+.
T Consensus 258 ---~dP~~~~~~~~gLgw~~~Cp~g~g~~t~~sglDG~Wt~tP~~FDN~YF~nLl~~eW~~~~~p~g~~Q~~~~~~~~~~ 334 (409)
T cd00649 258 ---PEPEAAPIEQQGLGWKNSYGTGKGKDTITSGLEGAWTPTPTKWDNNYLKNLFGYEWELTKSPAGAWQWVPKNAAGEN 334 (409)
T ss_pred ---CCCCcCHHHHHhhcccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHHhccceeccCCCCcccccccCccccc
Confidence 69999999999995 899972 12255788 47999999999999998
Q ss_pred ------------ccccccchhhhccCCCcHHHHHHhhcCchHHHHHHHHHHHHH--hcCCCCCCCCCC
Q 035963 294 ------------NMGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKL--GNIGVLARPNEG 347 (360)
Q Consensus 294 ------------~~glL~SD~~L~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km--~~igv~tg~~~G 347 (360)
+.+||+||++|+.|++++++|++||.|+++||++|++||+|| +.+|+++. --|
T Consensus 335 ~~~d~~~~~~~~~~gmL~SD~aL~~Dp~tr~iV~~yA~d~~~Ff~dFA~A~~KL~hrdmgp~~~-~~g 401 (409)
T cd00649 335 TVPDAHDPSKKHAPMMLTTDLALRFDPEYEKISRRFLENPDEFADAFAKAWFKLTHRDMGPKSR-YLG 401 (409)
T ss_pred cCCCccccccccCcccchhhHhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHccccCCchhh-hcC
Confidence 568999999999999999999999999999999999999999 69999986 544
No 11
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=4.5e-52 Score=435.71 Aligned_cols=266 Identities=20% Similarity=0.231 Sum_probs=229.4
Q ss_pred CCcCc-cccCCcCH-HHHHHHHHHHHHHhc--------ccchhhhHHhhhccccc-------cCC-CCccccCCCccccc
Q 035963 63 LSLSH-YHSTCPDL-EGIIHRQVQAWIRKD--------YTFAASLIRLHFHDCVV-------RGC-DASIMLSHKGSERR 124 (360)
Q Consensus 63 L~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GC-DgSIll~~~~~E~~ 124 (360)
+-.+| |.+.+-.+ .+.|+++|++.+... ...+|-+|||+||++.+ ||| .|+|++. +|++
T Consensus 39 ~~~~f~y~~~~~~ld~~a~~~dl~~l~~~s~~wwpad~g~ygp~~vRlAWHsAgTYr~~d~rGGa~gg~iRf~---P~~s 115 (716)
T TIGR00198 39 MGEDFDYAEEFQQLDLAAVKQDLKHLMTDSQSWWPADWGHYGGLFIRMAWHAAGTYRIADGRGGAATGNQRFA---PLNS 115 (716)
T ss_pred CCCCccHHHHhhhccHHHHHHHHHHHHhcCcccCccccCCcceeeeeeeccccccccCCCCCCCCCCCceecc---cccC
Confidence 44555 66555443 357999999999875 36899999999999985 788 5789998 5999
Q ss_pred ccCCCCc-chhHHHHHHHHHHHhhCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCc----------------
Q 035963 125 AKVSKTL-RGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISS---------------- 187 (360)
Q Consensus 125 ~~~N~~L-rgf~vId~iK~~le~~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~---------------- 187 (360)
++.|.+| +.+.++++||+ .||++|||||||+||+++||+.+|||.|+|.+||+|+..+.
T Consensus 116 w~~N~~Ldka~~lL~pIk~----kyp~~VS~ADLivLAG~vAVE~~Ggp~i~f~~GR~D~~~~~~d~~~g~e~~~l~~~~ 191 (716)
T TIGR00198 116 WPDNVNLDKARRLLWPIKK----KYGNKLSWADLIILAGTVAYESMGLKVFGFAGGREDIWEPDKDIYWGAEKEWLTSSR 191 (716)
T ss_pred chhhhhHHHHHHHHHHHHH----HCCCceeHHHHHHHHHHHHHHHhCCCccCCCCCCCCCCCcccccccccccchhhccc
Confidence 9999999 57888888887 46899999999999999999999999999999999994322
Q ss_pred ---------------------hhhhccCCCCCCCCHHHHHHHHHHCCCChhhhhhhh-cccccccccccccccccccCCC
Q 035963 188 ---------------------AREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLS-GAHTIGRSSCDAINHRLHNFNG 245 (360)
Q Consensus 188 ---------------------~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLs-GaHTiG~ahc~~f~~Rl~~f~g 245 (360)
++. ...+|+|..++.+|++.|++||||++|||||+ ||||||++||.+|.+||
T Consensus 192 ~~~~~l~~p~a~~~~Gliyvnpeg-~~~lPdP~~sa~~Lrd~F~rmGLnd~EmVALiaGaHTiGkaHc~s~~~rl----- 265 (716)
T TIGR00198 192 EDRESLENPLAATEMGLIYVNPEG-PDGHPDPLCTAQDIRTTFARMGMNDEETVALIAGGHTVGKCHGAGPAELI----- 265 (716)
T ss_pred cccccccccchhhhccccccCccc-ccCCCCCCCCHHHHHHHHHHcCCChHHHeeeecCceeccccCCCcccccC-----
Confidence 111 12699999999999999999999999999995 99999999999999997
Q ss_pred CCCCCCCCCHHHHHHHhhcCCC----C-CCccccCC---CCCCcccchHHHHHhhcc-----------------------
Q 035963 246 TRKADPSLDTKYLNSLKKKCAA----S-SHVYVDLD---ATTPRIFDTAYYTNLGRN----------------------- 294 (360)
Q Consensus 246 ~~~~DP~~d~~~~~~L~~~Cp~----~-~~~~~~lD---~~Tp~~FDN~Yy~~ll~~----------------------- 294 (360)
++||++++.|++.|+..||. + ++....+| ..||.+|||+||++|+..
T Consensus 266 --g~dP~~~~~~~~gLg~~c~~~~g~g~dt~~sglDG~wT~TP~~FDN~YF~nLl~~~w~~~~s~~g~~q~~~~~~~~~~ 343 (716)
T TIGR00198 266 --GPDPEGAPIEEQGLGWHNQYGKGVGRDTMTSGLEVAWTTTPTQWDNGYFYMLFNYEWELKKSPAGAWQWEAVDAPEII 343 (716)
T ss_pred --CCCCCcCHHHHHHhcccCCCCCCCCCCcccccCCCCCCCCCCccchHHHHHHhcCCceeeecCCCCceeeeccccccc
Confidence 27999999999999999984 1 12246777 479999999999999975
Q ss_pred -----------cccccchhhhccCCCcHHHHHHhhcCchHHHHHHHHHHHHHh--cCCCCCC
Q 035963 295 -----------MGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLG--NIGVLAR 343 (360)
Q Consensus 295 -----------~glL~SD~~L~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~--~igv~tg 343 (360)
.++|.||++|..|++++++|+.||.|+++|+++|++||+||+ .+|++..
T Consensus 344 p~~~~~~~~~~~~mL~SDlaL~~Dp~~r~iVe~yA~d~~~F~~dFA~Aw~KL~~~d~gp~~~ 405 (716)
T TIGR00198 344 PDVEDPNKKHNPIMLDADLALRFDPEFRKISRRFLREPDYFAEAFAKAWFKLTHRDMGPKSR 405 (716)
T ss_pred ccccccccccccCccchhHHhccCccHHHHHHHHhcCHHHHHHHHHHHHHHHcccccCchhh
Confidence 689999999999999999999999999999999999999998 5776654
No 12
>cd08201 plant_peroxidase_like_1 Uncharacterized family of plant peroxidase-like proteins. This is a subgroup of heme-dependent peroxidases similar to plant peroxidases. Along with animal peroxidases, these enzymes belong to a group of peroxidases containing a heme prosthetic group (ferriprotoporphyrin IX) which catalyzes a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. The plant peroxidase-like superfamily is found in all three kingdoms of life and carries out a variety of biosynthetic and degradative functions.
Probab=100.00 E-value=1.1e-50 Score=384.25 Aligned_cols=214 Identities=22% Similarity=0.263 Sum_probs=180.6
Q ss_pred HHHHHhcccchhhhHHhhhcccc-------ccCCCCccccCCCccccc-ccCCCCcchhHHHHHHHHHHHhhCCCCcCHH
Q 035963 84 QAWIRKDYTFAASLIRLHFHDCV-------VRGCDASIMLSHKGSERR-AKVSKTLRGFRIIDEIKAEVEKKCPKTVSCA 155 (360)
Q Consensus 84 ~~~~~~~~~~aa~lLRL~FHDcf-------v~GCDgSIll~~~~~E~~-~~~N~~Lrgf~vId~iK~~le~~cp~~VScA 155 (360)
..+...++.++|++|||+||||| ++||||||+++.+.+|+. .+.|.+|++|+.|+.+ +||||
T Consensus 32 ~~~~~~~~~~aa~~LRL~FHDc~t~~~~~g~gGcDgSIlle~~~~En~G~~~n~~l~~~~~i~~~----------~VScA 101 (264)
T cd08201 32 DCAPGPGRQAAAEWLRTAFHDMATHNVDDGTGGLDASIQYELDRPENIGSGFNTTLNFFVNFYSP----------RSSMA 101 (264)
T ss_pred ccCcCCCccHHHHHHHHHHHhhcCcccCCCCCCCCcceeecCCChhhccCchhhccccceeeccC----------ccCHH
Confidence 33445788999999999999999 899999999975447877 5566788888876532 69999
Q ss_pred HHHHHhHHHHHHhhCCCccccccccccCCCCchhhhccCCCCCCCCHHHHHHHHHHCCCChhhhhhhhc-cccccccccc
Q 035963 156 DILTAAARDATVVAGGPFWEVPFGRKDGKISSAREANRLVPQGHENVTTLIQIFRDHGLNILDLVVLSG-AHTIGRSSCD 234 (360)
Q Consensus 156 DiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLsG-aHTiG~ahc~ 234 (360)
||||||||+||+.||||.|+|++||+|++.+.+. .||.|+.++++|++.|+++||+++|||+|+| |||||++||.
T Consensus 102 DiialAa~~AV~~~GGP~i~v~~GR~Da~~s~~~----glP~P~~~v~~l~~~Fa~~Gfs~~DmVaLsggaHTiG~ahc~ 177 (264)
T cd08201 102 DLIAMGVVTSVASCGGPVVPFRAGRIDATEAGQA----GVPEPQTDLGTTTESFRRQGFSTSEMIALVACGHTLGGVHSE 177 (264)
T ss_pred HHHHHHHHHHHHHcCCCeecccccCCCccccccc----cCCCCccCHHHHHHHHHHcCCChHHHheeecCCeeeeecccc
Confidence 9999999999999999999999999999988764 4999999999999999999999999999995 9999999999
Q ss_pred ccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchHHHHHhhcccc----------cccchhhh
Q 035963 235 AINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYTNLGRNMG----------LLSTDQLL 304 (360)
Q Consensus 235 ~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~Yy~~ll~~~g----------lL~SD~~L 304 (360)
.|.+++-. | +. .+...++| .||.+|||+||.+++.+.. .+.||..+
T Consensus 178 ~f~~~~~~--g------~~---------------~~~~~p~d-stp~~FDn~~f~E~l~g~~~~~L~~~~~~~~~sd~r~ 233 (264)
T cd08201 178 DFPEIVPP--G------SV---------------PDTVLQFF-DTTIQFDNKVVTEYLSGTTNNPLVVGPNNTTNSDLRI 233 (264)
T ss_pred cchhhcCC--c------cc---------------cCCCCCCC-CCccccchHHHHHHhcCCCCCceeecCCCCccchhhh
Confidence 98777421 0 00 00145678 7999999999999998742 46899999
Q ss_pred ccCCCcHHHHHHhhcCchHHHHHHHHHHHHHhc
Q 035963 305 NSDARTGPFVSVLASQPLVFSSQFAASMVKLGN 337 (360)
Q Consensus 305 ~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~ 337 (360)
+..+.- ..++..| +++.|.+.++..+.||.+
T Consensus 234 f~~d~n-~t~~~l~-~~~~f~~~c~~~~~~mi~ 264 (264)
T cd08201 234 FSSDGN-VTMNELA-SPDTFQKTCADILQRMID 264 (264)
T ss_pred eecCcc-HHHHHhc-ChHHHHHHHHHHHHHHhC
Confidence 986654 5678888 789999999999999974
No 13
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=2.6e-49 Score=413.01 Aligned_cols=268 Identities=20% Similarity=0.258 Sum_probs=231.0
Q ss_pred CCCcCc-cccCCcCH-HHHHHHHHHHHHHhc--------ccchhhhHHhhhccccc-------cCCC-CccccCCCcccc
Q 035963 62 YLSLSH-YHSTCPDL-EGIIHRQVQAWIRKD--------YTFAASLIRLHFHDCVV-------RGCD-ASIMLSHKGSER 123 (360)
Q Consensus 62 ~L~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~--------~~~aa~lLRL~FHDcfv-------~GCD-gSIll~~~~~E~ 123 (360)
.+-.+| |.+.+-.+ .+.|+++|++.+... ...+|-+|||+||++.+ |||+ |+|++. +|+
T Consensus 40 p~~~~f~y~~~~~~ld~~a~k~di~~l~~~sqdwwpaD~g~ygp~~vRlAWH~AgTYr~~d~rGGangg~iRf~---pe~ 116 (726)
T PRK15061 40 PMGEDFDYAEEFKKLDLEALKKDLKALMTDSQDWWPADYGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA---PLN 116 (726)
T ss_pred CCCCCCCHHHHhchhhHHHHHHHHHHHHhcccccccccCCCccceeeeeeecccccccCcCCCCCCCCCcccCc---ccc
Confidence 355556 66665444 467999999999865 37899999999999985 7996 799998 599
Q ss_pred cccCCCCc-chhHHHHHHHHHHHhhCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCchh-------------
Q 035963 124 RAKVSKTL-RGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSAR------------- 189 (360)
Q Consensus 124 ~~~~N~~L-rgf~vId~iK~~le~~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~~------------- 189 (360)
+++.|.+| ++..++++||+++ |..||+||+|+||+..|||.+|||.|++.+||.|...+...
T Consensus 117 ~w~~N~gL~ka~~~L~pik~ky----~~~iS~ADLi~LaG~vAiE~~Ggp~i~f~~GR~D~~~~~~~v~wg~e~~~l~~~ 192 (726)
T PRK15061 117 SWPDNVNLDKARRLLWPIKQKY----GNKISWADLMILAGNVALESMGFKTFGFAGGREDVWEPEEDVYWGPEKEWLGGD 192 (726)
T ss_pred cchhhhhHHHHHHHHHHHHHHh----CCCccHHHHHHHHHHHHHHHcCCCccCcCCCCCCCcCCccccccCccccccccc
Confidence 99999999 6889999999988 55799999999999999999999999999999998654321
Q ss_pred -------------------------hhccCCCCCCCCHHHHHHHHHHCCCChhhhhhhh-cccccccccccccccccccC
Q 035963 190 -------------------------EANRLVPQGHENVTTLIQIFRDHGLNILDLVVLS-GAHTIGRSSCDAINHRLHNF 243 (360)
Q Consensus 190 -------------------------~a~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLs-GaHTiG~ahc~~f~~Rl~~f 243 (360)
+-...+|+|..++.++++.|++|||+++|||||+ ||||||++||..|.+||
T Consensus 193 ~r~~~~~~l~~pl~a~~mgliyvnpegp~glPdP~~sa~~lR~tF~RMGmnDeEtVALiaGgHT~GkaHca~~~~rl--- 269 (726)
T PRK15061 193 ERYSGERDLENPLAAVQMGLIYVNPEGPNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGDASHV--- 269 (726)
T ss_pred cccccccccccchhhhhccceecCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHheeeccCCceeeeCCCcCccccc---
Confidence 0012489999999999999999999999999995 99999999999999997
Q ss_pred CCCCCCCCCCCHHHHHHHh--hcCCCC---CCccccCC---CCCCcccchHHHHHhhcc---------------------
Q 035963 244 NGTRKADPSLDTKYLNSLK--KKCAAS---SHVYVDLD---ATTPRIFDTAYYTNLGRN--------------------- 294 (360)
Q Consensus 244 ~g~~~~DP~~d~~~~~~L~--~~Cp~~---~~~~~~lD---~~Tp~~FDN~Yy~~ll~~--------------------- 294 (360)
++||.+++.+++.|. +.||.+ ++....+| ..||.+|||+||++|+.+
T Consensus 270 ----gpdP~~a~~~~qgLgw~~~c~~g~g~dt~tsGldG~Wt~tPt~fDN~YF~nLl~~~W~~~~sp~G~~qw~~~~~~~ 345 (726)
T PRK15061 270 ----GPEPEAAPIEEQGLGWKNSYGSGKGADTITSGLEGAWTTTPTQWDNGYFENLFGYEWELTKSPAGAWQWVPKDGAA 345 (726)
T ss_pred ----CCCCCcCHHHHHhccccccCCCCCCCCCccccCCCCCCCCcchhhHHHHHHHhhCcceeccCCCccccccccCccc
Confidence 279999999999985 899972 22245688 579999999999999985
Q ss_pred ---------------cccccchhhhccCCCcHHHHHHhhcCchHHHHHHHHHHHHH--hcCCCCCC
Q 035963 295 ---------------MGLLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKL--GNIGVLAR 343 (360)
Q Consensus 295 ---------------~glL~SD~~L~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km--~~igv~tg 343 (360)
.+||+||++|..|++++++|++||.|+++|+++|++||.|| ..+|+++.
T Consensus 346 ~~~~pd~~~~~~~~~~~MLtSD~AL~~DP~~r~iV~~fA~d~~~F~~~FA~A~~KL~hrdmgp~~r 411 (726)
T PRK15061 346 EDTVPDAHDPSKKHAPTMLTTDLALRFDPEYEKISRRFLENPEEFADAFARAWFKLTHRDMGPKSR 411 (726)
T ss_pred cccCCcccccccccCcccccccHHhhcCCcHHHHHHHHhcCHHHHHHHHHHHHHHHcccCCCchhh
Confidence 58999999999999999999999999999999999999999 55777765
No 14
>cd08200 catalase_peroxidase_2 C-terminal non-catalytic domain of catalase-peroxidases. This is a subgroup of heme-dependent peroxidases of the plant superfamily that share a heme prosthetic group and catalyze a multistep oxidative reaction involving hydrogen peroxide as the electron acceptor. Catalase-peroxidases can exhibit both catalase and broad-spectrum peroxidase activities depending on the steady-state concentration of hydrogen peroxide. These enzymes are found in many archaeal and bacterial organisms where they neutralize potentially lethal hydrogen peroxide molecules generated during photosynthesis or stationary phase. Along with related intracellular fungal and plant peroxidases, catalase-peroxidases belong to plant peroxidase superfamily. Unlike the eukaryotic enzymes, they are typically comprised of two homologous domains that probably arose via a single gene duplication event. The heme binding motif is present only in the N-terminal domain; the function of the C-terminal do
Probab=100.00 E-value=1.2e-38 Score=305.65 Aligned_cols=220 Identities=20% Similarity=0.262 Sum_probs=180.7
Q ss_pred HHHHHHHHhcccchhhhHHhhhccccc-------cCCCCc-cccCCCcccccccCCCC--c-chhHHHHHHHHHHHhh-C
Q 035963 81 RQVQAWIRKDYTFAASLIRLHFHDCVV-------RGCDAS-IMLSHKGSERRAKVSKT--L-RGFRIIDEIKAEVEKK-C 148 (360)
Q Consensus 81 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GCDgS-Ill~~~~~E~~~~~N~~--L-rgf~vId~iK~~le~~-c 148 (360)
+.+++.+......++.+|||+||++.+ ||++|+ |.|. +|++++.|.+ | +.+.++++||+++... -
T Consensus 17 ~~lk~~i~~~gl~~~~lvrlAWhsAgTyr~sd~rGGaNGariRl~---pe~~w~~N~~~~L~~~~~~Le~ik~~~~~~~~ 93 (297)
T cd08200 17 AALKAKILASGLTVSELVSTAWASASTFRNSDKRGGANGARIRLA---PQKDWEVNEPEELAKVLAVLEGIQKEFNESQS 93 (297)
T ss_pred HHHHHHHHhcCCcHHHHHHHhhhccccccCCCCCCCCCcccccCc---cccCcCccCcHHHHHHHHHHHHHHHHhccccc
Confidence 577788888888999999999999985 899999 9998 5999999998 8 6889999999998421 1
Q ss_pred C-CCcCHHHHHHHhHHHHHHhhCC-----CccccccccccCCCCchhhh--ccCCCCCC------------CCHHHHHHH
Q 035963 149 P-KTVSCADILTAAARDATVVAGG-----PFWEVPFGRKDGKISSAREA--NRLVPQGH------------ENVTTLIQI 208 (360)
Q Consensus 149 p-~~VScADiialAar~AV~~~GG-----P~~~v~~GRrD~~~s~~~~a--~~~lP~p~------------~~~~~l~~~ 208 (360)
+ ..||.||+|+||+..|||.+|| |.|++.+||.|...+..... ...+|.+. .+.+.|++.
T Consensus 94 ~~~~vS~ADLivLaG~vAiE~agg~ag~~p~Ipf~pGR~Da~~~~td~~sf~~l~P~adg~rny~~~~~~~~~~~~Lrd~ 173 (297)
T cd08200 94 GGKKVSLADLIVLGGCAAVEKAAKDAGVDIKVPFTPGRTDATQEQTDVESFEVLEPKADGFRNYLKKGYRVPPEEMLVDK 173 (297)
T ss_pred CCccccHHHHHHHHhHHHHHHHHhccCCCceeccCCCCCCcccCCCCcccccccCCCCcccccccccCCCCCHHHHHHHH
Confidence 1 2699999999999999999999 99999999999987543211 12345332 234789999
Q ss_pred HHHCCCChhhhhhhhccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchHH
Q 035963 209 FRDHGLNILDLVVLSGAH-TIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAY 287 (360)
Q Consensus 209 F~~~Gls~~dlVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~Y 287 (360)
|.++|||++|||||+||| ++|++|..+ +.| || + .+|.+|||.|
T Consensus 174 f~rlglsd~EmvaL~Gg~r~lG~~~~~s-------~~G--------------------~w-T--------~~p~~f~N~f 217 (297)
T cd08200 174 AQLLTLTAPEMTVLVGGLRVLGANYGGS-------KHG--------------------VF-T--------DRPGVLTNDF 217 (297)
T ss_pred HHhCCCChHHHhheecchhhcccCCCCC-------CCC--------------------CC-c--------CCCCccccHH
Confidence 999999999999999998 699887432 112 22 1 4799999999
Q ss_pred HHHhhcc--------------------cc-----cccchhhhccCCCcHHHHHHhhcC--chHHHHHHHHHHHHHhcCC
Q 035963 288 YTNLGRN--------------------MG-----LLSTDQLLNSDARTGPFVSVLASQ--PLVFSSQFAASMVKLGNIG 339 (360)
Q Consensus 288 y~~ll~~--------------------~g-----lL~SD~~L~~d~~t~~~V~~yA~d--~~~Ff~~Fa~Am~Km~~ig 339 (360)
|++|++. .| .+.+|.+|.+|++.|++|+.||.| +++||+||++||.||.++.
T Consensus 218 F~nLLd~~~~W~~~~~~~~~~~~~dr~~g~~~~~~t~~Dl~l~sd~~~R~~ve~YA~dd~~~~F~~DF~~A~~Klmeld 296 (297)
T cd08200 218 FVNLLDMSTEWKPADEDDGLFEGRDRKTGEVKWTATRVDLVFGSNSELRAVAEVYASDDAQEKFVKDFVAAWTKVMNLD 296 (297)
T ss_pred HHHHhcccceeeecCCCCCceeeccCCCCceeeccChhhhhhccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhcC
Confidence 9999951 01 267899999999999999999999 9999999999999999864
No 15
>TIGR00198 cat_per_HPI catalase/peroxidase HPI. Note that the translation PID:g296476 from accession X71420 from Rhodobacter capsulatus B10 contains extensive frameshift differences from the rest of the orthologous family.
Probab=100.00 E-value=1.5e-33 Score=296.25 Aligned_cols=219 Identities=19% Similarity=0.261 Sum_probs=176.9
Q ss_pred HHHHHHHHH---HHhcccchhhhHHhhhccccc-------cCCCCc-cccCCCcccccccCC--CCc-chhHHHHHHHHH
Q 035963 78 IIHRQVQAW---IRKDYTFAASLIRLHFHDCVV-------RGCDAS-IMLSHKGSERRAKVS--KTL-RGFRIIDEIKAE 143 (360)
Q Consensus 78 iV~~~v~~~---~~~~~~~aa~lLRL~FHDcfv-------~GCDgS-Ill~~~~~E~~~~~N--~~L-rgf~vId~iK~~ 143 (360)
+|+++|.+. +.......+.|||++||++.+ ||++|+ |+|. +|++++.| .+| +.+.++++||++
T Consensus 429 ~v~~di~~lk~~i~~sgl~~~~lVr~AWhsA~Tyr~sd~rGGaNGariRl~---pe~~w~~N~p~gL~~vl~~Le~Ik~~ 505 (716)
T TIGR00198 429 LSEGDIKELKQQILASGLSVSELVCTAWASASTFRSSDYRGGANGARIRLE---PQKNWPVNEPTRLAKVLAVLEKIQAE 505 (716)
T ss_pred hHHHHHHHHHHHHHhcCCcHHHHHHHhhhhcccccCCCCCCCCCcceeecc---hhcCcccCCHHHHHHHHHHHHHHHHH
Confidence 446666553 455667889999999999985 899998 9998 59999999 799 688999999998
Q ss_pred HHhhCCCCcCHHHHHHHhHHHHHHhh---CCC--ccccccccccCCCCchhhhccCCC-----C----------CCCCHH
Q 035963 144 VEKKCPKTVSCADILTAAARDATVVA---GGP--FWEVPFGRKDGKISSAREANRLVP-----Q----------GHENVT 203 (360)
Q Consensus 144 le~~cp~~VScADiialAar~AV~~~---GGP--~~~v~~GRrD~~~s~~~~a~~~lP-----~----------p~~~~~ 203 (360)
+.. +.||.||+|+||+..|||.+ ||| .+++.+||.|.+.... +++...| + ......
T Consensus 506 f~~---~~vS~ADLivLaG~vAVE~aa~~gG~~~~Vpf~pGR~Da~~~~t-d~~~~~~l~p~adgfRn~~~~~~~~~~~~ 581 (716)
T TIGR00198 506 FAK---GPVSLADLIVLGGGAAVEKAALDAGISVNVPFLPGRVDATQAMT-DAESFTPLEPIADGFRNYLKRDYAVTPEE 581 (716)
T ss_pred cCC---CcccHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCccccCCC-CccccccCCCCCcccchhccccccCCHHH
Confidence 842 27999999999999999999 998 5799999999987542 1222222 1 112356
Q ss_pred HHHHHHHHCCCChhhhhhhhcc-cccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcc
Q 035963 204 TLIQIFRDHGLNILDLVVLSGA-HTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRI 282 (360)
Q Consensus 204 ~l~~~F~~~Gls~~dlVaLsGa-HTiG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~ 282 (360)
.|++.|.++|||++|||||+|| |++|++|..+ +.| |+ - .+|.+
T Consensus 582 ~l~d~a~~lglt~~EmvaL~Gg~r~lG~~~~~s-------~~G--------------------~~--------T-~~p~~ 625 (716)
T TIGR00198 582 LLLDKAQLLTLTAPEMTVLIGGMRVLGANHGGS-------KHG--------------------VF--------T-DRVGV 625 (716)
T ss_pred HHHHHHHhCCCChHHHHheecchhhccccCCCC-------CCC--------------------CC--------c-CCCCc
Confidence 6899999999999999999999 5999998532 112 12 1 47999
Q ss_pred cchHHHHHhhccc--------------------c---c--ccchhhhccCCCcHHHHHHhhcCc--hHHHHHHHHHHHHH
Q 035963 283 FDTAYYTNLGRNM--------------------G---L--LSTDQLLNSDARTGPFVSVLASQP--LVFSSQFAASMVKL 335 (360)
Q Consensus 283 FDN~Yy~~ll~~~--------------------g---l--L~SD~~L~~d~~t~~~V~~yA~d~--~~Ff~~Fa~Am~Km 335 (360)
|||.||++|++-. | + ..+|.+|.+|++.|++|+.||+|+ ++||+||++||.|+
T Consensus 626 f~NdfF~~LLd~~~~w~~~~~~~~~~~~~dr~tg~~~~~~t~~Dl~~~sd~~lra~aE~YA~dd~~~~F~~DF~~Aw~Kl 705 (716)
T TIGR00198 626 LSNDFFVNLLDMAYEWRAADNNRYLFEGGDRQTGEVKWTATRVDLVFGSNSILRAVAEVYAQDDAREKFVKDFVAAWTKV 705 (716)
T ss_pred cccHHHHHHhcCCceeeecCCCCceeeeecCCCCceeeccChhheeeccCHHHHHHHHHHhcccccchHHHHHHHHHHHH
Confidence 9999999999721 2 2 278999999999999999999997 89999999999999
Q ss_pred hcCC
Q 035963 336 GNIG 339 (360)
Q Consensus 336 ~~ig 339 (360)
.+++
T Consensus 706 m~ld 709 (716)
T TIGR00198 706 MNLD 709 (716)
T ss_pred HhCC
Confidence 9987
No 16
>PRK15061 catalase/hydroperoxidase HPI(I); Provisional
Probab=100.00 E-value=4.2e-33 Score=291.65 Aligned_cols=219 Identities=21% Similarity=0.284 Sum_probs=181.0
Q ss_pred HHHHHHHHhcccchhhhHHhhhccccc-------cCCCCc-cccCCCcccccccCCC--Cc-chhHHHHHHHHHHHhhCC
Q 035963 81 RQVQAWIRKDYTFAASLIRLHFHDCVV-------RGCDAS-IMLSHKGSERRAKVSK--TL-RGFRIIDEIKAEVEKKCP 149 (360)
Q Consensus 81 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GCDgS-Ill~~~~~E~~~~~N~--~L-rgf~vId~iK~~le~~cp 149 (360)
..+++.+....-..+.|||++||++.+ ||++|+ |+|. +|++++.|. +| +.+.++++||+++...-.
T Consensus 442 ~~lk~~i~~~gl~~~~LVr~AWhsA~Tyr~sd~rGGaNGarIRl~---Pq~~w~~N~p~~L~~vl~~LE~Ik~~f~~~~~ 518 (726)
T PRK15061 442 AALKAKILASGLSVSELVSTAWASASTFRGSDKRGGANGARIRLA---PQKDWEVNEPAQLAKVLAVLEGIQAEFNAAQS 518 (726)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHhhcccccCCCCCCCCCccceecc---cccCccccCHHHHHHHHHHHHHHHHHHhhccC
Confidence 567777778888899999999999985 899998 9998 599999999 88 588999999999964321
Q ss_pred --CCcCHHHHHHHhHHHHHHhh---CC--CccccccccccCCCCchhhhc---cCCCCCC------------CCHHHHHH
Q 035963 150 --KTVSCADILTAAARDATVVA---GG--PFWEVPFGRKDGKISSAREAN---RLVPQGH------------ENVTTLIQ 207 (360)
Q Consensus 150 --~~VScADiialAar~AV~~~---GG--P~~~v~~GRrD~~~s~~~~a~---~~lP~p~------------~~~~~l~~ 207 (360)
..||.||+|+||+..|||.+ || |.|++.+||.|.+..... ++ ..+|.+. .....|++
T Consensus 519 ~~~~vS~ADLivLaG~vAIE~aa~~aG~~~~VPf~pGR~Da~~~~td-~esf~~l~P~Adgfrny~~~~~~~~~e~~L~d 597 (726)
T PRK15061 519 GGKKVSLADLIVLGGNAAVEQAAKAAGHDVTVPFTPGRTDATQEQTD-VESFAVLEPKADGFRNYLKKGYSVSPEELLVD 597 (726)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHHhCCCCcccCcCCCCCCcccCCCC-cccccccCCCCccccccccccCCCCHHHHHHH
Confidence 36999999999999999999 68 999999999999875322 22 2466543 13478999
Q ss_pred HHHHCCCChhhhhhhhccc-ccccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchH
Q 035963 208 IFRDHGLNILDLVVLSGAH-TIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTA 286 (360)
Q Consensus 208 ~F~~~Gls~~dlVaLsGaH-TiG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~ 286 (360)
.|.++|||++|||||+||| ++|..|-.+ +.| |+ - .+|.+|||.
T Consensus 598 ~a~~lglt~~EmvaL~Gg~r~Lg~~~~~S-------~~G--------------------~~--------T-~~p~~fsNd 641 (726)
T PRK15061 598 KAQLLTLTAPEMTVLVGGLRVLGANYGGS-------KHG--------------------VF--------T-DRPGVLTND 641 (726)
T ss_pred HHHhCCCChHHHhheecchhhcccCCCCC-------CCC--------------------CC--------c-CCCCccccH
Confidence 9999999999999999997 688887432 112 22 1 479999999
Q ss_pred HHHHhhcc----------c----------c---c--ccchhhhccCCCcHHHHHHhhcC--chHHHHHHHHHHHHHhcCC
Q 035963 287 YYTNLGRN----------M----------G---L--LSTDQLLNSDARTGPFVSVLASQ--PLVFSSQFAASMVKLGNIG 339 (360)
Q Consensus 287 Yy~~ll~~----------~----------g---l--L~SD~~L~~d~~t~~~V~~yA~d--~~~Ff~~Fa~Am~Km~~ig 339 (360)
||++|++- . | + +.+|..|.+|++.|++|+.||+| +++||+||++||.|+.+++
T Consensus 642 fFvnLLdm~~~W~~~~~~~~~ye~~Dr~tg~~~~~~t~~Dlvfgsds~lRa~aEvYA~dd~~~kF~~DF~~Aw~Kvmeld 721 (726)
T PRK15061 642 FFVNLLDMGTEWKPTDEDEEVYEGRDRKTGEVKWTATRVDLVFGSNSQLRALAEVYASDDAKEKFVRDFVAAWTKVMNLD 721 (726)
T ss_pred HHHHHhcCCceeeecCCCCCceeeccCCCcceeeccChhheecccCHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCC
Confidence 99999951 1 1 1 47899999999999999999999 9999999999999999987
No 17
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.8e-28 Score=247.16 Aligned_cols=247 Identities=19% Similarity=0.232 Sum_probs=194.7
Q ss_pred HHHHHHHHHHHHhcc--------cchhhhHHhhhccccc-------cCC-CCccccCCCcccccccCCCCc-chhHHHHH
Q 035963 77 GIIHRQVQAWIRKDY--------TFAASLIRLHFHDCVV-------RGC-DASIMLSHKGSERRAKVSKTL-RGFRIIDE 139 (360)
Q Consensus 77 ~iV~~~v~~~~~~~~--------~~aa~lLRL~FHDcfv-------~GC-DgSIll~~~~~E~~~~~N~~L-rgf~vId~ 139 (360)
..|++++...+.... ..++-+|||+||-+.+ ||. .|..++. ++.++|.|.+| +++.++..
T Consensus 70 ~Avk~Dl~aLmtdSqdWWPAD~GhYGplfIRmAWHsAGTYRi~DGRGGa~~G~qRFa---PlnSWPDN~nLDKarRLLWP 146 (730)
T COG0376 70 AAVKRDLKALMTDSQDWWPADFGHYGPLFIRMAWHSAGTYRIGDGRGGAGGGQQRFA---PLNSWPDNANLDKARRLLWP 146 (730)
T ss_pred HHHHHHHHHHhhcccccCcccccccccceeeeeecccCceecccCCCCCCCCceecc---cccCCCcccchHHHHHHhhh
Confidence 367777777776642 4789999999999985 343 4456665 58899999999 69999999
Q ss_pred HHHHHHhhCCCCcCHHHHHHHhHHHHHHhhCCCccccccccccCCCCch-------------------------------
Q 035963 140 IKAEVEKKCPKTVSCADILTAAARDATVVAGGPFWEVPFGRKDGKISSA------------------------------- 188 (360)
Q Consensus 140 iK~~le~~cp~~VScADiialAar~AV~~~GGP~~~v~~GRrD~~~s~~------------------------------- 188 (360)
||+++ +..+|+||++.||+..|++.+|++.+.+..||.|-..+..
T Consensus 147 IKkKY----G~kiSWaDL~iLaGnvAlEsMGfktfGFa~GR~D~wepd~dvyWG~e~~wl~d~Ry~~~~~Le~PlaavqM 222 (730)
T COG0376 147 IKKKY----GRKISWADLIILAGNVALESMGFKTFGFAGGREDVWEPDEDVYWGSEKTWLGDERYSGDRDLENPLAAVQM 222 (730)
T ss_pred HhHhh----cccccHhHhhhhhchhhhhhcCCccccccCCCCcCCCCccccccCccccccccccccccccccCchhhhee
Confidence 99998 6699999999999999999999999999999999877665
Q ss_pred -------hhhccCCCCCCCCHHHHHHHHHHCCCChhhhhhhh-cccccccccccccccccccCCCCCCCCCCCCHHHHHH
Q 035963 189 -------REANRLVPQGHENVTTLIQIFRDHGLNILDLVVLS-GAHTIGRSSCDAINHRLHNFNGTRKADPSLDTKYLNS 260 (360)
Q Consensus 189 -------~~a~~~lP~p~~~~~~l~~~F~~~Gls~~dlVaLs-GaHTiG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~ 260 (360)
+. ....|+|..+..+++..|++|+++.+|.|||+ ||||+|++|...-..- -+++|.-.+--.+.
T Consensus 223 GLIYVNPEG-png~PDpl~aA~dIRetFaRMaMNDeETVALiaGGHtfGKtHGag~a~~-------vg~ePe~a~ie~qG 294 (730)
T COG0376 223 GLIYVNPEG-PNGNPDPLAAARDIRETFARMAMNDEETVALIAGGHTFGKTHGAGPASN-------VGPEPEAAPIEQQG 294 (730)
T ss_pred eeEEeCCCC-CCCCCChhhhHHHHHHHHHHhcCCcHhhhhhhhcccccccccCCCchhh-------cCCCccccchhhhc
Confidence 22 24689999999999999999999999999998 7999999996541111 12455433332232
Q ss_pred H--hhcCCC--CC-Ccc----ccCCCCCCcccchHHHHHhhccc-----------------------------------c
Q 035963 261 L--KKKCAA--SS-HVY----VDLDATTPRIFDTAYYTNLGRNM-----------------------------------G 296 (360)
Q Consensus 261 L--~~~Cp~--~~-~~~----~~lD~~Tp~~FDN~Yy~~ll~~~-----------------------------------g 296 (360)
| +..|.. +. ... +.+- .||++|||+||.+|+... .
T Consensus 295 lGW~~~~g~G~G~dtitsGlE~~Wt-~tPT~w~n~ff~~Lf~yEWeltksPAGa~Qw~~k~~~~~~~pd~~dp~~~~~p~ 373 (730)
T COG0376 295 LGWANTYGSGKGPDTITSGLEGAWT-TTPTQWSNEFFENLFNYEWELTKSPAGAWQWDAKSAAAETIPDAHDPSKKHGPM 373 (730)
T ss_pred cccccccCCCcCcccccccccccCC-CCcchhhhHHHHHHhccceeeecCCCccccccccCccccCCCCCCCcccccCce
Confidence 2 222222 11 101 2233 689999999999998631 3
Q ss_pred cccchhhhccCCCcHHHHHHhhcCchHHHHHHHHHHHHHhcCC
Q 035963 297 LLSTDQLLNSDARTGPFVSVLASQPLVFSSQFAASMVKLGNIG 339 (360)
Q Consensus 297 lL~SD~~L~~d~~t~~~V~~yA~d~~~Ff~~Fa~Am~Km~~ig 339 (360)
||.+|.+|.-||..+++.++|..|++.|.+.|++||.||..-.
T Consensus 374 MlttDlaLr~DP~Y~kIs~rf~e~pd~F~~~FArAWfKLtHRD 416 (730)
T COG0376 374 MLTTDLALRFDPEYEKISRRFLEDPDEFADAFARAWFKLTHRD 416 (730)
T ss_pred eeccchhhhcChHHHHHHHHHHhCHHHHHHHHHHHHHHHhhcc
Confidence 7999999999999999999999999999999999999997643
No 18
>COG0376 KatG Catalase (peroxidase I) [Inorganic ion transport and metabolism]
Probab=99.38 E-value=1.9e-12 Score=131.96 Aligned_cols=216 Identities=21% Similarity=0.267 Sum_probs=154.4
Q ss_pred HHHHHHHHhcccchhhhHHhhhccccc-------cCCCCc-cccCCCcccccccCCC--Cc-chhHHHHHHHHHHHhhCC
Q 035963 81 RQVQAWIRKDYTFAASLIRLHFHDCVV-------RGCDAS-IMLSHKGSERRAKVSK--TL-RGFRIIDEIKAEVEKKCP 149 (360)
Q Consensus 81 ~~v~~~~~~~~~~aa~lLRL~FHDcfv-------~GCDgS-Ill~~~~~E~~~~~N~--~L-rgf~vId~iK~~le~~cp 149 (360)
..++..+....-....++-.+|-.+.+ +|.+|. |.|. +.++++.|. -| +-+.+++.|.+...
T Consensus 452 ~~lK~~IlasgLsvs~lVstAWaSAsTfRgsDkRGGaNGaRirLa---PqkdWevN~P~~l~kvl~~le~iq~~fn---- 524 (730)
T COG0376 452 AALKAKILASGLSVSQLVSTAWASASTFRGSDKRGGANGARIRLA---PQKDWEVNQPAELAKVLAVLEKIQKEFN---- 524 (730)
T ss_pred HHHHHHHHHccCCHHHHHHHHHHhhhhccCCcccCCcCcceEeec---ccccCCCCCHHHHHHHHHHHHHHHHHhc----
Confidence 456777777888889999999988864 688875 8887 589999996 45 56788888888885
Q ss_pred CCcCHHHHHHHhHHHHHHhh---CCCc--cccccccccCCCCchhhhcc--CCCC------------CCCCHHHHHHHHH
Q 035963 150 KTVSCADILTAAARDATVVA---GGPF--WEVPFGRKDGKISSAREANR--LVPQ------------GHENVTTLIQIFR 210 (360)
Q Consensus 150 ~~VScADiialAar~AV~~~---GGP~--~~v~~GRrD~~~s~~~~a~~--~lP~------------p~~~~~~l~~~F~ 210 (360)
..||.||+|+|++..||+.+ +|-. +++.+||.|+.......... .-|- ...+-.-|++.=+
T Consensus 525 kkvSlADlIVL~G~a~ie~AAk~aG~~v~VPF~pGR~DA~qeqtDv~sf~~LeP~aDGfRNy~~~~~~~~pe~~LvDkAq 604 (730)
T COG0376 525 KKVSLADLIVLGGNAAVEKAAKAAGFSVTVPFAPGRTDASQEQTDVESFAVLEPIADGFRNYVKKDYVLTPEELLVDKAQ 604 (730)
T ss_pred CccchhHheeecchHHHHHHHHhcCceeeeccCCCCcccchhhcchhhhhcccccchhhhhhccCCCcCCHHHHHHHHHH
Confidence 47999999999999999987 6765 46789999997643221000 1111 1112334677777
Q ss_pred HCCCChhhhhhhhcccc-cccccccccccccccCCCCCCCCCCCCHHHHHHHhhcCCCCCCccccCCCCCCcccchHHHH
Q 035963 211 DHGLNILDLVVLSGAHT-IGRSSCDAINHRLHNFNGTRKADPSLDTKYLNSLKKKCAASSHVYVDLDATTPRIFDTAYYT 289 (360)
Q Consensus 211 ~~Gls~~dlVaLsGaHT-iG~ahc~~f~~Rl~~f~g~~~~DP~~d~~~~~~L~~~Cp~~~~~~~~lD~~Tp~~FDN~Yy~ 289 (360)
-.+||..||++|.||-- +|.-+ .|+. . .+.- ..|..+.|.||.
T Consensus 605 lL~LtapemtVLiGGlRvLg~n~-----------g~s~---------------------~--GVfT--~~pg~LtndFFv 648 (730)
T COG0376 605 LLTLTAPEMTVLIGGLRVLGANY-----------GGSK---------------------H--GVFT--DRPGVLTNDFFV 648 (730)
T ss_pred HhccCCccceEEEcceEeeccCC-----------CCCc---------------------c--ceec--cCcccccchhhh
Confidence 89999999999998754 34322 1110 0 1111 257777788888
Q ss_pred Hhhcc----------c----------cc-----ccchhhhccCCCcHHHHHHhhcC--chHHHHHHHHHHHHHhcCC
Q 035963 290 NLGRN----------M----------GL-----LSTDQLLNSDARTGPFVSVLASQ--PLVFSSQFAASMVKLGNIG 339 (360)
Q Consensus 290 ~ll~~----------~----------gl-----L~SD~~L~~d~~t~~~V~~yA~d--~~~Ff~~Fa~Am~Km~~ig 339 (360)
||++= + |- -..|..+-+++..|.+.+.||+| ++.|.+||+.||.|..++.
T Consensus 649 nLlDM~~~W~~~~~~~~~feg~DrktG~~kwt~trvDLvfGsns~LRA~aEVYa~dda~ekFv~DFvaaw~kVMn~D 725 (730)
T COG0376 649 NLLDMGTEWKPTDDARGLFEGRDRKTGEVKWTATRVDLVFGSNSELRALAEVYASDDAKEKFVKDFVAAWTKVMNLD 725 (730)
T ss_pred hhhhccceeeeccccccceeccccccCceEeeeeEEeEEecCcHHHHHHHHHHhccchHHHHHHHHHHHHHHHhccc
Confidence 87751 1 21 24677777888899999999976 7899999999999998764
No 19
>PTZ00411 transaldolase-like protein; Provisional
Probab=61.68 E-value=73 Score=32.11 Aligned_cols=60 Identities=20% Similarity=0.277 Sum_probs=36.5
Q ss_pred hCCCccccccccccCCCCchhhhccCCCCC---CCCHHHHHHHHHHCCCC----------hhhhhhhhccccc
Q 035963 169 AGGPFWEVPFGRKDGKISSAREANRLVPQG---HENVTTLIQIFRDHGLN----------ILDLVVLSGAHTI 228 (360)
Q Consensus 169 ~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p---~~~~~~l~~~F~~~Gls----------~~dlVaLsGaHTi 228 (360)
+|-..+..++||-+...-.+.......+.. -..+.++...|++.|+. .+|+..|.|+|.+
T Consensus 180 AGa~~ISPfVGRi~d~~~~~~~~~~~~~~~~~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qi~~laG~D~l 252 (333)
T PTZ00411 180 AGVTLISPFVGRILDWYKKPEKAESYVGAQDPGVISVTKIYNYYKKHGYKTIVMGASFRNTGEILELAGCDKL 252 (333)
T ss_pred cCCCEEEeecchHHHhcccccccccccccCCchHHHHHHHHHHHHHcCCCeEEEecccCCHHHHHHHHCCCEE
Confidence 377889999999966532221111111211 23567788888888875 4666777776644
No 20
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=54.21 E-value=8.6 Score=31.73 Aligned_cols=17 Identities=47% Similarity=0.761 Sum_probs=14.4
Q ss_pred CCccchHHHHHHHHHHH
Q 035963 1 MKSKQFTLFALILVQIL 17 (360)
Q Consensus 1 ~~~~~~~~~~~~~~~~~ 17 (360)
|.||.|.|++|+|+-+|
T Consensus 1 MaSK~~llL~l~LA~lL 17 (95)
T PF07172_consen 1 MASKAFLLLGLLLAALL 17 (95)
T ss_pred CchhHHHHHHHHHHHHH
Confidence 88999999999887654
No 21
>PF11895 DUF3415: Domain of unknown function (DUF3415); InterPro: IPR024589 Peroxidases are haem-containing enzymes that use hydrogen peroxide as the electron acceptor to catalyse a number of oxidative reactions. Peroxidases are found in bacteria, fungi, plants and animals. Fungal ligninases are extracellular haem enzymes involved in the degradation of lignin. They include lignin peroxidases (LiPs), manganese-dependent peroxidases (MnPs) and versatile peroxidases, which combine the substrate-specificity characteristics of the other two []. In MnP, Mn2+ serves as the reducing substrate []. It is commonly thought that the plant polymer lignin is the second most abundant organic compound on Earth, exceeded only by cellulose. Higher plants synthesise vast quantities of insoluble macromolecules, including lignins. Lignin is an amorphous three-dimensional aromatic biopolymer composed of oxyphenylpropane units. Biodegradation of lignins is slow - it is probable that their decomposition is the rate-limiting step in the biospheric carbon-oxygen cycle, which is mediated almost entirely by the catabolic activities of microorganisms. The white-rot fungi are able extensively to decompose all the important structural components of wood, including both cellulose and lignin. Under the proper environmental conditions, white-rot fungi completely degrade all structural components of lignin, with ultimate formation of CO2 and H2O. The first step in lignin degradation is depolymerisation, catalysed by the LiPs (ligninases). LiPs are secreted, along with hydrogen peroxide (H2O2), by white-rot fungi under conditions of nutrient limitation. The enzymes are not only important in lignin biodegradation, but are also potentially valuable in chemical waste disposal because of their ability to degrade environmental pollutants []. To date, 3D structures have been determined for LiP [] and MnP [] from Phanerochaete chrysosporium (White-rot fungus), and for the fungal peroxidase from Arthromyces ramosus []. All these proteins share the same architecture and consist of 2 all-alpha domains, between which is embedded the haem group. The helical topography of LiPs is nearly identical to that of yeast cytochrome c peroxidase (CCP) [], despite the former having 4 disulphide bonds, which are absent in CCP (MnP has an additional disulphide bond at the C terminus). This uncharacterised C-terminal domain is found in fungal ligninases. It is about 80 amino acids in length and associated with Pfam:PF00141.; PDB: 1B85_B 1B82_A 1B80_A 1YYG_A 1YZP_A 1MNP_A 1MN1_A 1YZR_A 1MN2_A 3M8M_A ....
Probab=42.82 E-value=20 Score=28.82 Aligned_cols=20 Identities=35% Similarity=0.416 Sum_probs=15.9
Q ss_pred HHHHHHHHHHHHHhcCCCCC
Q 035963 323 VFSSQFAASMVKLGNIGVLA 342 (360)
Q Consensus 323 ~Ff~~Fa~Am~Km~~igv~t 342 (360)
...+.|..||.||+.||.-.
T Consensus 2 ~m~~~F~~am~KlavLG~d~ 21 (80)
T PF11895_consen 2 KMQSAFKAAMAKLAVLGHDR 21 (80)
T ss_dssp HHHHHHHHHHHHHCTTTS-G
T ss_pred hHHHHHHHHHHHHHHhcCCh
Confidence 35679999999999998653
No 22
>TIGR00874 talAB transaldolase. This family includes the majority of known and predicted transaldolase sequences, including E. coli TalA and TalB. It excluded two other families. The first includes E. coli transaldolase-like protein TalC. The second family includes the putative transaldolases of Helicobacter pylori and Mycobacterium tuberculosis.
Probab=40.47 E-value=1.7e+02 Score=29.29 Aligned_cols=60 Identities=17% Similarity=0.202 Sum_probs=35.1
Q ss_pred hhCCCccccccccccCCCCchhhhcc---CCCCCCCCHHHHHHHHHHCCCC----------hhhhhhhhcccc
Q 035963 168 VAGGPFWEVPFGRKDGKISSAREANR---LVPQGHENVTTLIQIFRDHGLN----------ILDLVVLSGAHT 227 (360)
Q Consensus 168 ~~GGP~~~v~~GRrD~~~s~~~~a~~---~lP~p~~~~~~l~~~F~~~Gls----------~~dlVaLsGaHT 227 (360)
.+|-..+..++||-|...-....... ..-++-..+.++...|++.|+. .+|+.+|.|+|.
T Consensus 167 ~AGa~~ISPFVgRi~dw~~~~~g~~~~~~~~d~Gv~~v~~i~~~~k~~g~~T~Im~ASfRn~~qv~~laG~d~ 239 (317)
T TIGR00874 167 EAKVTLISPFVGRILDWYKAATGKKEYSIEEDPGVASVKKIYNYYKKHGYPTEVMGASFRNKEEILALAGCDR 239 (317)
T ss_pred HcCCCEEEeecchHhHhhhhccCccccccccCchHHHHHHHHHHHHHcCCCcEEEeeccCCHHHHHHHHCCCe
Confidence 34888899999999763211110000 0111234677788899998885 345555555553
No 23
>PRK12346 transaldolase A; Provisional
Probab=26.59 E-value=76 Score=31.75 Aligned_cols=77 Identities=16% Similarity=0.220 Sum_probs=44.5
Q ss_pred CcCHHHHHHHhHHHHHHh--hCCCccccccccccCCCCchhhhccCCCC----CCCCHHHHHHHHHHCCCC---------
Q 035963 151 TVSCADILTAAARDATVV--AGGPFWEVPFGRKDGKISSAREANRLVPQ----GHENVTTLIQIFRDHGLN--------- 215 (360)
Q Consensus 151 ~VScADiialAar~AV~~--~GGP~~~v~~GRrD~~~s~~~~a~~~lP~----p~~~~~~l~~~F~~~Gls--------- 215 (360)
.|+|-=.+.+....|+.. +|-..+..++||-|...-..... ..++. +-..+.++...|++.|+.
T Consensus 149 GI~~n~TliFS~~Qa~~aa~AGa~~ISPfVgRi~d~~~~~~~~-~~~~~~~~~Gv~~v~~i~~~~k~~~~~T~Vm~ASfR 227 (316)
T PRK12346 149 GINCNLTLLFSFAQARACAEAGVFLISPFVGRIYDWYQARKPM-DPYVVEEDPGVKSVRNIYDYYKQHRYETIVMGASFR 227 (316)
T ss_pred CCceeEEEecCHHHHHHHHHcCCCEEEecccHHHHhhhhcccc-ccccccCCChHHHHHHHHHHHHHcCCCcEEEecccC
Confidence 344444444444444433 48889999999998743221110 01111 123577788888888875
Q ss_pred -hhhhhhhhccccc
Q 035963 216 -ILDLVVLSGAHTI 228 (360)
Q Consensus 216 -~~dlVaLsGaHTi 228 (360)
..|+.+|.|+|.+
T Consensus 228 n~~qi~alaG~d~l 241 (316)
T PRK12346 228 RTEQILALAGCDRL 241 (316)
T ss_pred CHHHHHHHhCCCEE
Confidence 4566677776643
No 24
>cd00439 Transaldolase Transaldolase. Enzymes found in the non-oxidative branch of the pentose phosphate pathway, that catalyze the reversible transfer of a dihydroxyacetone group from fructose-6-phosphate to erythrose-4-phosphate yielding sedoheptulose-7-phosphate and glyceraldehyde-3-phosphate. They are members of the class I aldolases, who are characterized by using a Schiff-base mechanism for stabilization of the reaction intermediates.
Probab=22.98 E-value=86 Score=30.13 Aligned_cols=78 Identities=19% Similarity=0.170 Sum_probs=39.6
Q ss_pred chhHHHHHHHHHHHhhCCCCcCHHHHHHHhHHHHHHh--hCCCccccccccccCCCCchhhhccCCCCCCC---CHHHHH
Q 035963 132 RGFRIIDEIKAEVEKKCPKTVSCADILTAAARDATVV--AGGPFWEVPFGRKDGKISSAREANRLVPQGHE---NVTTLI 206 (360)
Q Consensus 132 rgf~vId~iK~~le~~cp~~VScADiialAar~AV~~--~GGP~~~v~~GRrD~~~s~~~~a~~~lP~p~~---~~~~l~ 206 (360)
.|++.+..+++ ..|++-=.+.+....|+.. +|...+..++||.|...-......+.=|.... .+.++.
T Consensus 127 ~Gl~A~~~L~~-------~GI~vn~T~vfs~~Qa~~aa~Aga~~ispfvgRid~~~~~~~~~~~~d~~~~~gi~~~~~~~ 199 (252)
T cd00439 127 EGIPAIKDLIA-------AGISVNVTLIFSIAQYEAVADAGTSVASPFVSRIDTLMDKMLEQIGLDLRGKAGVAQVTLAY 199 (252)
T ss_pred HHHHHHHHHHH-------CCCceeeeeecCHHHHHHHHHcCCCEEEEeccHHHHHhhhhccccccccccCcHHHHHHHHH
Confidence 36665554432 1233333334444433333 47788899999999865432221111111112 344666
Q ss_pred HHHHHCCCCh
Q 035963 207 QIFRDHGLNI 216 (360)
Q Consensus 207 ~~F~~~Gls~ 216 (360)
+.|+..|...
T Consensus 200 ~~~~~~~~~t 209 (252)
T cd00439 200 KLYKQKFKKQ 209 (252)
T ss_pred HHHHHhCCCC
Confidence 7777777653
Done!